locus-tag	class	description
I871_RS00015	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
I871_RS00045	COG0736	holo-[acyl-carrier-protein] synthase activity
I871_RS00080	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
I871_RS00100	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
I871_RS00115	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
I871_RS00125	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
I871_RS00150	COG0681	Belongs to the peptidase S26 family
I871_RS00285	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
I871_RS00320	COG0006	proline dipeptidase activity
I871_RS00325	COG0561	phosphatase activity
I871_RS00330	COG2309	aminopeptidase activity
I871_RS00335	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
I871_RS00365	COG0552	protein localization to endoplasmic reticulum
I871_RS00375	COG4591	ABC-type transport system involved in lipoprotein release permease component
I871_RS00380	COG1136	(ABC) transporter
I871_RS00390	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
I871_RS00410	COG0606	chelatase, subunit chli
I871_RS00460	COG1390	Produces ATP from ADP in the presence of a proton gradient across the membrane
I871_RS00475	COG1162	GTPase activity
I871_RS00485	COG0017	Asparaginyl-tRNA synthetase
I871_RS00500	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
I871_RS00520	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
I871_RS00535	COG0305	Participates in initiation and elongation during chromosome replication
I871_RS00540	COG0359	binds to the 23S rRNA
I871_RS00545	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
I871_RS00555	COG0360	Binds together with S18 to 16S ribosomal RNA
I871_RS00560	COG1263	PTS System
I871_RS00560	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
I871_RS00560	COG2190	(PTS) system
I871_RS00575	COG4589	Belongs to the CDS family
I871_RS00585	COG0233	cytoplasmic translational termination
I871_RS00590	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
I871_RS00620	COG0539	negative regulation of cytoplasmic translation
I871_RS00640	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
I871_RS00670	COG1022	Amp-dependent synthetase and ligase
I871_RS00705	COG4176	ABC-type proline glycine betaine transport system permease component
I871_RS00725	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
I871_RS00835	COG0714	Associated with various cellular activities
I871_RS00840	COG0445	tRNA wobble uridine modification
I871_RS00845	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
I871_RS00865	COG1699	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
I871_RS00870	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
I871_RS00875	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
I871_RS00890	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
I871_RS00895	COG0291	Belongs to the bacterial ribosomal protein bL35 family
I871_RS00900	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
I871_RS00915	COG0084	hydrolase, TatD family'
I871_RS00925	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
I871_RS00945	COG1181	Belongs to the D-alanine--D-alanine ligase family
I871_RS00950	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
I871_RS00960	COG4536	flavin adenine dinucleotide binding
I871_RS00985	COG0742	ribosomal rna small subunit methyltransferase
I871_RS01010	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
I871_RS01030	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
I871_RS01040	COG0573	inorganic phosphate transmembrane transporter activity
I871_RS01045	COG0581	inorganic phosphate transmembrane transporter activity
I871_RS01050	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
I871_RS01080	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
I871_RS01115	COG0268	Binds directly to 16S ribosomal RNA
I871_RS01125	COG0012	GTP binding
I871_RS01145	COG1428	Deoxynucleoside kinase
I871_RS01155	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
I871_RS01165	COG2271	Major facilitator Superfamily
I871_RS01170	COG0584	glycerophosphoryl diester phosphodiesterase
I871_RS01190	COG0739	heme binding
I871_RS01195	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
I871_RS01220	COG0495	leucyl-tRNA aminoacylation
I871_RS01230	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
I871_RS01240	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
I871_RS01245	COG0739	heme binding
I871_RS01280	COG1196	nuclear chromosome segregation
I871_RS01280	COG0741	lytic transglycosylase activity
I871_RS01280	COG0739	heme binding
I871_RS01290	COG0443	Heat shock 70 kDa protein
I871_RS01370	COG1360	Flagellar Motor Protein
I871_RS01390	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
I871_RS01440	COG1815	bacterial-type flagellum-dependent cell motility
I871_RS01450	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
I871_RS01520	COG0497	DNA recombination
I871_RS01525	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
I871_RS01530	COG0835	chemotaxis
I871_RS01535	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
I871_RS01540	COG0142	geranyltranstransferase activity
I871_RS01610	COG0601	transmembrane transport
I871_RS01615	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
I871_RS01620	COG0444	Belongs to the ABC transporter superfamily
I871_RS01625	COG4608	Belongs to the ABC transporter superfamily
I871_RS01635	COG0148	phosphopyruvate hydratase activity
I871_RS01655	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
I871_RS01660	COG0154	amidase activity
I871_RS01670	COG0210	DNA helicase
I871_RS01700	COG0227	Belongs to the bacterial ribosomal protein bL28 family
I871_RS01740	COG0793	Belongs to the peptidase S41A family
I871_RS01745	COG0455	bacterial-type flagellum organization
I871_RS01750	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
I871_RS01760	COG1362	aminopeptidase activity
I871_RS01770	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
I871_RS01775	COG0542	response to heat
I871_RS01805	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
I871_RS01815	COG1854	S-ribosylhomocysteine lyase activity
I871_RS01825	COG2239	Acts as a magnesium transporter
I871_RS01835	COG1744	ABC transporter substrate-binding protein PnrA-like
I871_RS01850	COG0049	tRNA binding
I871_RS01855	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
I871_RS01860	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
I871_RS01865	COG0085	RNA polymerase activity
I871_RS01870	COG0222	ribosome binding
I871_RS01880	COG0081	regulation of translation
I871_RS01885	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
I871_RS01905	COG0267	Belongs to the bacterial ribosomal protein bL33 family
I871_RS01985	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
I871_RS02000	COG0563	adenylate kinase activity
I871_RS02030	COG0561	phosphatase activity
I871_RS02040	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
I871_RS02045	COG0165	Argininosuccinate lyase
I871_RS02070	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
I871_RS02075	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
I871_RS02115	COG0187	DNA topoisomerase II activity
I871_RS02130	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
I871_RS02140	COG0230	Belongs to the bacterial ribosomal protein bL34 family
I871_RS02145	COG0594	ribonuclease P activity
I871_RS02195	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
I871_RS02210	COG0668	transmembrane transport
I871_RS02215	COG0438	transferase activity, transferring glycosyl groups
I871_RS02225	COG0322	excinuclease ABC activity
I871_RS02265	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
I871_RS02270	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
I871_RS02275	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
I871_RS02300	COG1137	ATPase activity
I871_RS02315	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
I871_RS02335	COG0534	Mate efflux family protein
I871_RS02345	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
I871_RS02350	COG0051	transcription antitermination factor activity, RNA binding
I871_RS02355	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
I871_RS02360	COG0088	Forms part of the polypeptide exit tunnel
I871_RS02370	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
I871_RS02390	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
I871_RS02395	COG0255	Belongs to the universal ribosomal protein uL29 family
I871_RS02400	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
I871_RS02410	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
I871_RS02415	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
I871_RS02420	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
I871_RS02425	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
I871_RS02430	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
I871_RS02435	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
I871_RS02440	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
I871_RS02470	COG0202	RNA polymerase activity
I871_RS02475	COG0203	ribosomal protein L17
I871_RS02485	COG1692	metallophosphoesterase
I871_RS02500	COG1160	GTP binding
I871_RS02555	COG0386	Belongs to the glutathione peroxidase family
I871_RS02560	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
I871_RS02560	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
I871_RS02595	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
I871_RS02595	COG0321	lipoyl(octanoyl) transferase activity
I871_RS02600	COG0708	Exodeoxyribonuclease III
I871_RS02610	COG0612	Peptidase, M16
I871_RS02675	COG1070	Carbohydrate kinase
I871_RS02705	COG2201	protein-glutamate methylesterase activity
I871_RS02710	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
I871_RS02750	COG0326	Molecular chaperone. Has ATPase activity
I871_RS02755	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
I871_RS02770	COG0835	chemotaxis
I871_RS02780	COG0643	Histidine kinase
I871_RS02780	COG2198	Histidine kinase
I871_RS02795	COG0745	RESPONSE REGULATOR receiver
I871_RS02800	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
I871_RS02820	COG0504	CTP synthase activity
I871_RS02845	COG0534	Mate efflux family protein
I871_RS02860	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
I871_RS02860	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
I871_RS02870	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
I871_RS02875	COG0658	competence protein
I871_RS02885	COG1022	Amp-dependent synthetase and ligase
I871_RS02900	COG0840	transmembrane signaling receptor activity
I871_RS02905	COG5278	phosphoserine phosphatase activity
I871_RS02905	COG0840	transmembrane signaling receptor activity
I871_RS02915	COG0215	cysteine-tRNA ligase activity
I871_RS02940	COG1620	l-lactate permease
I871_RS02945	COG1686	Belongs to the peptidase S11 family
I871_RS02950	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
I871_RS02955	COG2195	Cleaves the N-terminal amino acid of tripeptides
I871_RS02980	COG0544	peptidyl-prolyl cis-trans isomerase activity
I871_RS02985	COG0740	serine-type endopeptidase activity
I871_RS02990	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
I871_RS03055	COG1388	LysM domain
I871_RS03055	COG3584	3D domain protein
I871_RS03080	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
I871_RS03080	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
I871_RS03080	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
I871_RS03095	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
I871_RS03105	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
I871_RS03110	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
I871_RS03125	COG1757	Na H antiporter
I871_RS03135	COG1177	transmembrane transport
I871_RS03150	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
I871_RS03160	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
I871_RS03160	COG1263	PTS System
I871_RS03160	COG2190	(PTS) system
I871_RS03180	COG0459	protein refolding
I871_RS03210	COG0484	heat shock protein binding
I871_RS03225	COG0588	phosphoglycerate mutase activity
I871_RS03265	COG0860	N-Acetylmuramoyl-L-alanine amidase
I871_RS03285	COG0835	chemotaxis
I871_RS03295	COG2201	protein-glutamate methylesterase activity
I871_RS03315	COG0546	phosphoglycolate phosphatase activity
I871_RS03320	COG3845	ABC transporter
I871_RS03330	COG1079	Belongs to the binding-protein-dependent transport system permease family
I871_RS03335	COG0840	transmembrane signaling receptor activity
I871_RS03340	COG0840	transmembrane signaling receptor activity
I871_RS03345	COG0482	sulfurtransferase activity
I871_RS03350	COG3425	synthase
I871_RS03355	COG1304	FMN binding
I871_RS03390	COG0783	Belongs to the Dps family
I871_RS03395	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
I871_RS03405	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
I871_RS03430	COG0335	large ribosomal subunit rRNA binding
I871_RS03440	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
I871_RS03450	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
I871_RS03455	COG0333	Belongs to the bacterial ribosomal protein bL32 family
I871_RS03460	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
I871_RS03500	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
I871_RS03540	COG0768	penicillin binding
I871_RS03545	COG0772	Belongs to the SEDS family
I871_RS03570	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
I871_RS03580	COG0489	protein tyrosine kinase activity
I871_RS03590	COG0446	pyridine nucleotide-disulphide oxidoreductase
I871_RS03605	COG1475	DNA binding
I871_RS03625	COG0009	L-threonylcarbamoyladenylate synthase
I871_RS03630	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
I871_RS03635	COG1199	ATP-dependent helicase activity
I871_RS03640	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
I871_RS03655	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
I871_RS03660	COG0488	(ABC) transporter
I871_RS03685	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
I871_RS03695	COG0601	transmembrane transport
I871_RS03730	COG1131	(ABC) transporter
I871_RS03770	COG0739	heme binding
I871_RS03775	COG2204	response regulator
I871_RS03780	COG5002	protein histidine kinase activity
I871_RS03785	COG0470	DNA polymerase III
I871_RS03795	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
I871_RS03815	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
I871_RS03820	COG3951	Flagellar rod assembly protein muramidase FlgJ
I871_RS03840	COG4786	Flagellar basal body rod
I871_RS03850	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
I871_RS03870	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
I871_RS03885	COG2088	sporulation resulting in formation of a cellular spore
I871_RS03895	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
I871_RS03905	COG0037	tRNA processing
I871_RS03925	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
I871_RS03940	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
I871_RS03950	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
I871_RS03980	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
I871_RS03980	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
I871_RS04040	COG4145	pantothenate transmembrane transporter activity
I871_RS04055	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
I871_RS04065	COG1102	Psort location Cytoplasmic, score
I871_RS04100	COG1263	PTS System
I871_RS04100	COG2190	(PTS) system
I871_RS04100	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
I871_RS04125	COG3142	Participates in the control of copper homeostasis
I871_RS04145	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
I871_RS04170	COG2235	arginine
I871_RS04180	COG1288	antiporter activity
I871_RS04185	COG0549	Belongs to the carbamate kinase family