locus-tag class description A7978_RS00010 PF00933 Glycosyl hydrolase family 3 N terminal domain A7978_RS00025 PF00579 tRNA synthetases class I (W and Y) A7978_RS00030 PF01594 AI-2E family transporter A7978_RS00040 PF02457 DisA bacterial checkpoint controller nucleotide-binding A7978_RS00045 PF07949 YbbR-like protein A7978_RS00050 PF01648 4'-phosphopantetheinyl transferase superfamily A7978_RS00055 PF09986 Uncharacterized protein conserved in bacteria (DUF2225) A7978_RS00060 PF01416 tRNA pseudouridine synthase A7978_RS00070 PF04851 Type III restriction enzyme, res subunit A7978_RS00070 PF00271 Helicase conserved C-terminal domain A7978_RS00070 PF17764 3′ DNA-binding domain (3′BD) A7978_RS00070 PF18074 Primosomal protein N C-terminal domain A7978_RS00070 PF18319 PriA DNA helicase Cys-rich region (CRR) domain A7978_RS00075 PF00485 Phosphoribulokinase / Uridine kinase family A7978_RS00085 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 A7978_RS00085 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) A7978_RS00090 PF00849 RNA pseudouridylate synthase A7978_RS00100 PF00365 Phosphofructokinase A7978_RS00105 PF02547 Queuosine biosynthesis protein A7978_RS00110 PF05491 RuvB C-terminal winged helix domain A7978_RS00110 PF05496 Holliday junction DNA helicase RuvB P-loop domain A7978_RS00110 PF17864 RuvB AAA lid domain A7978_RS00115 PF01330 RuvA N terminal domain A7978_RS00120 PF02075 Crossover junction endodeoxyribonuclease RuvC A7978_RS00125 PF01709 Transcriptional regulator A7978_RS00130 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain A7978_RS00130 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain A7978_RS00145 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 A7978_RS00155 PF10502 Signal peptidase, peptidase S26 A7978_RS00160 PF03781 Sulfatase-modifying factor enzyme 1 A7978_RS00160 PF08308 PEGA domain A7978_RS00165 PF01668 SmpB protein A7978_RS00175 PF00521 DNA gyrase/topoisomerase IV, subunit A A7978_RS00180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A7978_RS00180 PF00204 DNA gyrase B A7978_RS00180 PF01751 Toprim domain A7978_RS00180 PF00986 DNA gyrase B subunit, carboxyl terminus A7978_RS00185 PF01553 Acyltransferase A7978_RS00200 PF01739 CheR methyltransferase, SAM binding domain A7978_RS00200 PF03705 CheR methyltransferase, all-alpha domain A7978_RS00205 PF01895 PhoU domain A7978_RS00220 PF02463 RecF/RecN/SMC N terminal domain A7978_RS00220 PF06470 SMC proteins Flexible Hinge Domain A7978_RS00225 PF01351 Ribonuclease HII A7978_RS00255 PF00588 SpoU rRNA Methylase family A7978_RS00260 PF03167 Uracil DNA glycosylase superfamily A7978_RS00265 PF03840 Preprotein translocase SecG subunit A7978_RS00270 PF00121 Triosephosphate isomerase A7978_RS00275 PF00162 Phosphoglycerate kinase A7978_RS00280 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A7978_RS00280 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain A7978_RS00290 PF03471 Transporter associated domain A7978_RS00290 PF00571 CBS domain A7978_RS00295 PF02130 Uncharacterized protein family UPF0054 A7978_RS00300 PF00085 Thioredoxin A7978_RS00305 PF04452 RNA methyltransferase A7978_RS00310 PF03793 PASTA domain A7978_RS00315 PF02911 Formyl transferase, C-terminal domain A7978_RS00315 PF00551 Formyl transferase A7978_RS00320 PF01327 Polypeptide deformylase A7978_RS00340 PF02073 Thermophilic metalloprotease (M29) A7978_RS00365 PF00472 RF-1 domain A7978_RS00365 PF03462 PCRF domain A7978_RS00375 PF00448 SRP54-type protein, GTPase domain A7978_RS00375 PF02881 SRP54-type protein, helical bundle domain A7978_RS00385 PF02687 FtsX-like permease family A7978_RS00385 PF12704 MacB-like periplasmic core domain A7978_RS00390 PF00005 ABC transporter A7978_RS00410 PF00266 Aminotransferase class-V A7978_RS00415 PF01592 NifU-like N terminal domain A7978_RS00420 PF13335 Magnesium chelatase, subunit ChlI C-terminal A7978_RS00420 PF01078 Magnesium chelatase, subunit ChlI A7978_RS00425 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain A7978_RS00425 PF00056 lactate/malate dehydrogenase, NAD binding domain A7978_RS00430 PF06421 GTP-binding protein LepA C-terminus A7978_RS00430 PF03144 Elongation factor Tu domain 2 A7978_RS00430 PF00009 Elongation factor Tu GTP binding domain A7978_RS00430 PF14492 Elongation Factor G, domain II A7978_RS00430 PF00679 Elongation factor G C-terminus A7978_RS00450 PF01813 ATP synthase subunit D A7978_RS00455 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A7978_RS00455 PF02874 ATP synthase alpha/beta family, beta-barrel domain A7978_RS00460 PF16886 ATPsynthase alpha/beta subunit N-term extension A7978_RS00460 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A7978_RS00460 PF02874 ATP synthase alpha/beta family, beta-barrel domain A7978_RS00480 PF00488 MutS domain V A7978_RS00480 PF01713 Smr domain A7978_RS00485 PF03193 RsgA GTPase A7978_RS00490 PF01177 Asp/Glu/Hydantoin racemase A7978_RS00495 PF00152 tRNA synthetases class II (D, K and N) A7978_RS00495 PF01336 OB-fold nucleic acid binding domain A7978_RS00505 PF00156 Phosphoribosyl transferase domain A7978_RS00510 PF00595 PDZ domain A7978_RS00515 PF00557 Metallopeptidase family M24 A7978_RS00525 PF01029 NusB family A7978_RS00530 PF05698 Bacterial trigger factor protein (TF) C-terminus A7978_RS00535 PF00108 Thiolase, N-terminal domain A7978_RS00535 PF02803 Thiolase, C-terminal domain A7978_RS00545 PF00772 DnaB-like helicase N terminal domain A7978_RS00545 PF03796 DnaB-like helicase C terminal domain A7978_RS00550 PF03948 Ribosomal protein L9, C-terminal domain A7978_RS00550 PF01281 Ribosomal protein L9, N-terminal domain A7978_RS00555 PF01084 Ribosomal protein S18 A7978_RS00560 PF00436 Single-strand binding protein family A7978_RS00565 PF01250 Ribosomal protein S6 A7978_RS00570 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 A7978_RS00570 PF02378 Phosphotransferase system, EIIC A7978_RS00570 PF00367 phosphotransferase system, EIIB A7978_RS00575 PF03006 Haemolysin-III related A7978_RS00580 PF02163 Peptidase family M50 A7978_RS00580 PF17820 PDZ domain A7978_RS00590 PF01255 Putative undecaprenyl diphosphate synthase A7978_RS00595 PF01765 Ribosome recycling factor A7978_RS00600 PF00889 Elongation factor TS A7978_RS00605 PF00318 Ribosomal protein S2 A7978_RS00610 PF02545 Maf-like protein A7978_RS00630 PF00575 S1 RNA binding domain A7978_RS00635 PF02224 Cytidylate kinase A7978_RS00640 PF00849 RNA pseudouridylate synthase A7978_RS00640 PF01479 S4 domain A7978_RS00650 PF00154 recA bacterial DNA recombination protein A7978_RS00655 PF01272 Transcription elongation factor, GreA/GreB, C-term A7978_RS00655 PF03449 Transcription elongation factor, N-terminal A7978_RS00670 PF03129 Anticodon binding domain A7978_RS00670 PF13393 Histidyl-tRNA synthetase A7978_RS00675 PF03793 PASTA domain A7978_RS00675 PF00905 Penicillin binding protein transpeptidase domain A7978_RS00675 PF03717 Penicillin-binding Protein dimerisation domain A7978_RS00680 PF00501 AMP-binding enzyme A7978_RS00690 PF00873 AcrB/AcrD/AcrF family A7978_RS00705 PF01809 Putative membrane protein insertion efficiency factor A7978_RS00710 PF04069 Substrate binding domain of ABC-type glycine betaine transport system A7978_RS00715 PF00528 Binding-protein-dependent transport system inner membrane component A7978_RS00720 PF00571 CBS domain A7978_RS00720 PF00005 ABC transporter A7978_RS00725 PF00669 Bacterial flagellin N-terminal helical region A7978_RS00725 PF00460 Flagella basal body rod protein A7978_RS00725 PF00700 Bacterial flagellin C-terminal helical region A7978_RS00730 PF07195 Flagellar hook-associated protein 2 C-terminus A7978_RS00730 PF02465 Flagellar hook-associated protein 2 N-terminus A7978_RS00735 PF01979 Amidohydrolase family A7978_RS00740 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase A7978_RS00745 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain A7978_RS00745 PF02777 Iron/manganese superoxide dismutases, C-terminal domain A7978_RS00750 PF07517 SecA DEAD-like domain A7978_RS00750 PF02810 SEC-C motif A7978_RS00750 PF07516 SecA Wing and Scaffold domain A7978_RS00750 PF01043 SecA preprotein cross-linking domain A7978_RS00770 PF00842 Alanine racemase, C-terminal domain A7978_RS00770 PF01168 Alanine racemase, N-terminal domain A7978_RS00790 PF01699 Sodium/calcium exchanger protein A7978_RS00800 PF02446 4-alpha-glucanotransferase A7978_RS00805 PF01389 OmpA-like transmembrane domain A7978_RS00805 PF00691 OmpA family A7978_RS00815 PF01176 Translation initiation factor 1A / IF-1 A7978_RS00835 PF00092 von Willebrand factor type A domain A7978_RS00850 PF17863 AAA lid domain A7978_RS00850 PF07726 ATPase family associated with various cellular activities (AAA) A7978_RS00855 PF02527 rRNA small subunit methyltransferase G A7978_RS00860 PF01134 Glucose inhibited division protein A A7978_RS00860 PF13932 GidA associated domain A7978_RS00865 PF10396 GTP-binding protein TrmE N-terminus A7978_RS00865 PF01926 50S ribosome-binding GTPase A7978_RS00865 PF12631 MnmE helical domain A7978_RS00875 PF07196 Flagellin hook IN motif A7978_RS00875 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A7978_RS00885 PF02623 FliW protein A7978_RS00890 PF02599 Global regulator protein family A7978_RS00895 PF00814 Glycoprotease family A7978_RS00900 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE A7978_RS00910 PF00453 Ribosomal protein L20 A7978_RS00915 PF01632 Ribosomal protein L35 A7978_RS00920 PF05198 Translation initiation factor IF-3, N-terminal domain A7978_RS00920 PF00707 Translation initiation factor IF-3, C-terminal domain A7978_RS00935 PF01026 TatD related DNase A7978_RS00945 PF00472 RF-1 domain A7978_RS00945 PF03462 PCRF domain A7978_RS00950 PF05175 Methyltransferase small domain A7978_RS00955 PF04607 Region found in RelA / SpoT proteins A7978_RS00955 PF02824 TGS domain A7978_RS00965 PF01820 D-ala D-ala ligase N-terminus A7978_RS00965 PF07478 D-ala D-ala ligase C-terminus A7978_RS00970 PF08245 Mur ligase middle domain A7978_RS00970 PF02875 Mur ligase family, glutamate ligase domain A7978_RS00970 PF01225 Mur ligase family, catalytic domain A7978_RS00980 PF01595 Cyclin M transmembrane N-terminal domain A7978_RS00980 PF03471 Transporter associated domain A7978_RS00980 PF00571 CBS domain A7978_RS00985 PF01145 SPFH domain / Band 7 family A7978_RS00990 PF01145 SPFH domain / Band 7 family A7978_RS01010 PF00483 Nucleotidyl transferase A7978_RS01030 PF08676 MutL C terminal dimerisation domain A7978_RS01030 PF01119 DNA mismatch repair protein, C-terminal domain A7978_RS01050 PF01132 Elongation factor P (EF-P) OB domain A7978_RS01050 PF09285 Elongation factor P, C-terminal A7978_RS01050 PF08207 Elongation factor P (EF-P) KOW-like domain A7978_RS01055 PF12849 PBP superfamily domain A7978_RS01060 PF00528 Binding-protein-dependent transport system inner membrane component A7978_RS01065 PF00528 Binding-protein-dependent transport system inner membrane component A7978_RS01070 PF00005 ABC transporter A7978_RS01075 PF02535 ZIP Zinc transporter A7978_RS01080 PF01411 tRNA synthetases class II (A) A7978_RS01080 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain A7978_RS01090 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase A7978_RS01100 PF01207 Dihydrouridine synthase (Dus) A7978_RS01105 PF02403 Seryl-tRNA synthetase N-terminal domain A7978_RS01105 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A7978_RS01115 PF00675 Insulinase (Peptidase family M16) A7978_RS01115 PF05193 Peptidase M16 inactive domain A7978_RS01115 PF08367 Peptidase M16C associated A7978_RS01120 PF01197 Ribosomal protein L31 A7978_RS01125 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A7978_RS01125 PF07497 Rho termination factor, RNA-binding domain A7978_RS01135 PF00216 Bacterial DNA-binding protein A7978_RS01140 PF01649 Ribosomal protein S20 A7978_RS01150 PF01926 50S ribosome-binding GTPase A7978_RS01150 PF06071 Protein of unknown function (DUF933) A7978_RS01160 PF00795 Carbon-nitrogen hydrolase A7978_RS01170 PF01712 Deoxynucleoside kinase A7978_RS01180 PF00230 Major intrinsic protein A7978_RS01185 PF02782 FGGY family of carbohydrate kinases, C-terminal domain A7978_RS01185 PF00370 FGGY family of carbohydrate kinases, N-terminal domain A7978_RS01190 PF07690 Major Facilitator Superfamily A7978_RS01195 PF03009 Glycerophosphoryl diester phosphodiesterase family A7978_RS01200 PF16901 C-terminal domain of alpha-glycerophosphate oxidase A7978_RS01200 PF01266 FAD dependent oxidoreductase A7978_RS01215 PF01551 Peptidase family M23 A7978_RS01215 PF04225 Opacity-associated protein A LysM-like domain A7978_RS01220 PF01725 Ham1 family A7978_RS01225 PF01432 Peptidase family M3 A7978_RS01225 PF08439 Oligopeptidase F A7978_RS01235 PF09335 SNARE associated Golgi protein A7978_RS01245 PF00133 tRNA synthetases class I (I, L, M and V) A7978_RS01245 PF13603 Leucyl-tRNA synthetase, Domain 2 A7978_RS01245 PF09334 tRNA synthetases class I (M) A7978_RS01245 PF08264 Anticodon-binding domain of tRNA A7978_RS01255 PF02190 ATP-dependent protease La (LON) substrate-binding domain A7978_RS01255 PF00004 ATPase family associated with various cellular activities (AAA) A7978_RS01255 PF05362 Lon protease (S16) C-terminal proteolytic domain A7978_RS01265 PF01368 DHH family A7978_RS01265 PF02272 DHHA1 domain A7978_RS01265 PF17768 RecJ OB domain A7978_RS01270 PF01551 Peptidase family M23 A7978_RS01270 PF04225 Opacity-associated protein A LysM-like domain A7978_RS01275 PF01165 Ribosomal protein S21 A7978_RS01280 PF01580 FtsK/SpoIIIE family A7978_RS01280 PF09397 Ftsk gamma domain A7978_RS01280 PF17854 FtsK alpha domain A7978_RS01285 PF02673 Bacitracin resistance protein BacA A7978_RS01305 PF10145 Phage-related minor tail protein A7978_RS01305 PF01464 Transglycosylase SLT domain A7978_RS01305 PF01551 Peptidase family M23 A7978_RS01310 PF10502 Signal peptidase, peptidase S26 A7978_RS01315 PF00012 Hsp70 protein A7978_RS01340 PF10609 NUBPL iron-transfer P-loop NTPase A7978_RS01345 PF00448 SRP54-type protein, GTPase domain A7978_RS01350 PF00771 FHIPEP family A7978_RS01355 PF01312 FlhB HrpN YscU SpaS Family A7978_RS01360 PF01311 Bacterial export proteins, family 1 A7978_RS01365 PF01313 Bacterial export proteins, family 3 A7978_RS01370 PF00813 FliP family A7978_RS01380 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term A7978_RS01385 PF02154 Flagellar motor switch protein FliM A7978_RS01385 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term A7978_RS01390 PF03748 Flagellar basal body-associated protein FliL A7978_RS01395 PF13677 Membrane MotB of proton-channel complex MotA/MotB A7978_RS01395 PF00691 OmpA family A7978_RS01400 PF01618 MotA/TolQ/ExbB proton channel family A7978_RS01410 PF00460 Flagella basal body rod protein A7978_RS01410 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A7978_RS01410 PF07559 Flagellar basal body protein FlaE A7978_RS01415 PF03963 Flagellar hook capping protein - N-terminal region A7978_RS01435 PF18269 T3SS EscN ATPase C-terminal domain A7978_RS01435 PF02874 ATP synthase alpha/beta family, beta-barrel domain A7978_RS01435 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A7978_RS01440 PF02108 Flagellar assembly protein FliH A7978_RS01445 PF14842 FliG N-terminal domain A7978_RS01445 PF14841 FliG middle domain A7978_RS01445 PF01706 FliG C-terminal domain A7978_RS01450 PF01514 Secretory protein of YscJ/FliF family A7978_RS01450 PF08345 Flagellar M-ring protein C-terminal A7978_RS01455 PF02049 Flagellar hook-basal body complex protein FliE A7978_RS01460 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A7978_RS01460 PF00460 Flagella basal body rod protein A7978_RS01465 PF00460 Flagella basal body rod protein A7978_RS01470 PF07724 AAA domain (Cdc48 subfamily) A7978_RS01475 PF00227 Proteasome subunit A7978_RS01480 PF02481 DNA recombination-mediator protein A A7978_RS01485 PF00515 Tetratricopeptide repeat A7978_RS01490 PF00091 Tubulin/FtsZ family, GTPase domain A7978_RS01490 PF12327 FtsZ family, C-terminal domain A7978_RS01495 PF02491 SHS2 domain inserted in FTSA A7978_RS01505 PF01098 Cell cycle protein A7978_RS01510 PF00953 Glycosyl transferase family 4 A7978_RS01515 PF01225 Mur ligase family, catalytic domain A7978_RS01515 PF02875 Mur ligase family, glutamate ligase domain A7978_RS01515 PF08245 Mur ligase middle domain A7978_RS01525 PF01795 MraW methylase family A7978_RS01545 PF02463 RecF/RecN/SMC N terminal domain A7978_RS01550 PF01513 ATP-NAD kinase A7978_RS01555 PF01584 CheW-like domain A7978_RS01560 PF01728 FtsJ-like methyltransferase A7978_RS01565 PF00348 Polyprenyl synthetase A7978_RS01585 PF00005 ABC transporter A7978_RS01625 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A7978_RS01630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A7978_RS01635 PF00528 Binding-protein-dependent transport system inner membrane component A7978_RS01640 PF12911 N-terminal TM domain of oligopeptide transport permease C A7978_RS01640 PF00528 Binding-protein-dependent transport system inner membrane component A7978_RS01645 PF00005 ABC transporter A7978_RS01645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A7978_RS01650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A7978_RS01650 PF00005 ABC transporter A7978_RS01660 PF00113 Enolase, C-terminal TIM barrel domain A7978_RS01660 PF03952 Enolase, N-terminal domain A7978_RS01665 PF00380 Ribosomal protein S9/S16 A7978_RS01670 PF00572 Ribosomal protein L13 A7978_RS01680 PF02637 GatB domain A7978_RS01680 PF02934 GatB/GatE catalytic domain A7978_RS01685 PF01425 Amidase A7978_RS01695 PF00580 UvrD/REP helicase N-terminal domain A7978_RS01695 PF13361 UvrD-like helicase C-terminal domain A7978_RS01705 PF03548 Outer membrane lipoprotein carrier protein LolA A7978_RS01715 PF00224 Pyruvate kinase, barrel domain A7978_RS01715 PF02887 Pyruvate kinase, alpha/beta domain A7978_RS01725 PF00830 Ribosomal L28 family A7978_RS01760 PF04452 RNA methyltransferase A7978_RS01765 PF13180 PDZ domain A7978_RS01765 PF03572 Peptidase family S41 A7978_RS01775 PF10609 NUBPL iron-transfer P-loop NTPase A7978_RS01780 PF01790 Prolipoprotein diacylglyceryl transferase A7978_RS01785 PF00563 EAL domain A7978_RS01790 PF02127 Aminopeptidase I zinc metalloprotease (M18) A7978_RS01795 PF00367 phosphotransferase system, EIIB A7978_RS01800 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus A7978_RS01800 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus A7978_RS01805 PF17871 AAA lid domain A7978_RS01805 PF10431 C-terminal, D2-small domain, of ClpB protein A7978_RS01805 PF02861 Clp amino terminal domain, pathogenicity island component A7978_RS01805 PF00004 ATPase family associated with various cellular activities (AAA) A7978_RS01805 PF07724 AAA domain (Cdc48 subfamily) A7978_RS01810 PF00579 tRNA synthetases class I (W and Y) A7978_RS01810 PF01479 S4 domain A7978_RS01815 PF03129 Anticodon binding domain A7978_RS01815 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A7978_RS01820 PF00749 tRNA synthetases class I (E and Q), catalytic domain A7978_RS01835 PF01048 Phosphorylase superfamily A7978_RS01840 PF00438 S-adenosylmethionine synthetase, N-terminal domain A7978_RS01840 PF02772 S-adenosylmethionine synthetase, central domain A7978_RS01840 PF02773 S-adenosylmethionine synthetase, C-terminal domain A7978_RS01845 PF02664 S-Ribosylhomocysteinase (LuxS) A7978_RS01850 PF01230 HIT domain A7978_RS01855 PF03448 MgtE intracellular N domain A7978_RS01855 PF00571 CBS domain A7978_RS01855 PF01769 Divalent cation transporter A7978_RS01860 PF01204 Trehalase A7978_RS01865 PF02608 ABC transporter substrate-binding protein PnrA-like A7978_RS01870 PF02608 ABC transporter substrate-binding protein PnrA-like A7978_RS01875 PF02608 ABC transporter substrate-binding protein PnrA-like A7978_RS01880 PF02608 ABC transporter substrate-binding protein PnrA-like A7978_RS01885 PF00177 Ribosomal protein S7p/S5e A7978_RS01890 PF00164 Ribosomal protein S12/S23 A7978_RS01895 PF05000 RNA polymerase Rpb1, domain 4 A7978_RS01895 PF04997 RNA polymerase Rpb1, domain 1 A7978_RS01895 PF00623 RNA polymerase Rpb1, domain 2 A7978_RS01895 PF04983 RNA polymerase Rpb1, domain 3 A7978_RS01895 PF04998 RNA polymerase Rpb1, domain 5 A7978_RS01900 PF04561 RNA polymerase Rpb2, domain 2 A7978_RS01900 PF04560 RNA polymerase Rpb2, domain 7 A7978_RS01900 PF00562 RNA polymerase Rpb2, domain 6 A7978_RS01900 PF10385 RNA polymerase beta subunit external 1 domain A7978_RS01900 PF04565 RNA polymerase Rpb2, domain 3 A7978_RS01900 PF04563 RNA polymerase beta subunit A7978_RS01905 PF00542 Ribosomal protein L7/L12 C-terminal domain A7978_RS01905 PF16320 Ribosomal protein L7/L12 dimerisation domain A7978_RS01910 PF00466 Ribosomal protein L10 A7978_RS01915 PF00687 Ribosomal protein L1p/L10e family A7978_RS01920 PF00298 Ribosomal protein L11, RNA binding domain A7978_RS01920 PF03946 Ribosomal protein L11, N-terminal domain A7978_RS01925 PF02357 Transcription termination factor nusG A7978_RS01930 PF00584 SecE/Sec61-gamma subunits of protein translocation complex A7978_RS01940 PF00471 Ribosomal protein L33 A7978_RS01965 PF12796 Ankyrin repeats (3 copies) A7978_RS01980 PF09180 Prolyl-tRNA synthetase, C-terminal A7978_RS01980 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A7978_RS01980 PF03129 Anticodon binding domain A7978_RS01995 PF01238 Phosphomannose isomerase type I A7978_RS02000 PF02378 Phosphotransferase system, EIIC A7978_RS02000 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A7978_RS02000 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A7978_RS02025 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD A7978_RS02030 PF03705 CheR methyltransferase, all-alpha domain A7978_RS02030 PF01739 CheR methyltransferase, SAM binding domain A7978_RS02035 PF00072 Response regulator receiver domain A7978_RS02035 PF01339 CheB methylesterase A7978_RS02045 PF05191 Adenylate kinase, active site lid A7978_RS02055 PF00072 Response regulator receiver domain A7978_RS02060 PF00672 HAMP domain A7978_RS02060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A7978_RS02060 PF00512 His Kinase A (phospho-acceptor) domain A7978_RS02060 PF01627 Hpt domain A7978_RS02060 PF00072 Response regulator receiver domain A7978_RS02060 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) A7978_RS02080 PF00156 Phosphoribosyl transferase domain A7978_RS02085 PF00709 Adenylosuccinate synthetase A7978_RS02090 PF00206 Lyase A7978_RS02090 PF10397 Adenylosuccinate lyase C-terminus A7978_RS02095 PF02245 Methylpurine-DNA glycosylase (MPG) A7978_RS02115 PF18073 Rubredoxin metal binding domain A7978_RS02120 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A7978_RS02140 PF13614 AAA domain A7978_RS02150 PF17762 HTH domain found in ParB protein A7978_RS02150 PF02195 ParB-like nuclease domain A7978_RS02155 PF03989 DNA gyrase C-terminal domain, beta-propeller A7978_RS02155 PF00521 DNA gyrase/topoisomerase IV, subunit A A7978_RS02160 PF00204 DNA gyrase B A7978_RS02160 PF00986 DNA gyrase B subunit, carboxyl terminus A7978_RS02160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A7978_RS02160 PF01751 Toprim domain A7978_RS02165 PF08299 Bacterial dnaA protein helix-turn-helix A7978_RS02165 PF00308 Bacterial dnaA protein A7978_RS02165 PF11638 DnaA N-terminal domain A7978_RS02170 PF02767 DNA polymerase III beta subunit, central domain A7978_RS02170 PF00712 DNA polymerase III beta subunit, N-terminal domain A7978_RS02170 PF02768 DNA polymerase III beta subunit, C-terminal domain A7978_RS02175 PF02463 RecF/RecN/SMC N terminal domain A7978_RS02185 PF00468 Ribosomal protein L34 A7978_RS02190 PF00825 Ribonuclease P A7978_RS02195 PF02096 60Kd inner membrane protein A7978_RS02195 PF14849 YidC periplasmic domain A7978_RS02205 PF01370 NAD dependent epimerase/dehydratase family A7978_RS02210 PF01116 Fructose-bisphosphate aldolase class-II A7978_RS02220 PF02938 GAD domain A7978_RS02220 PF00152 tRNA synthetases class II (D, K and N) A7978_RS02220 PF01336 OB-fold nucleic acid binding domain A7978_RS02225 PF00999 Sodium/hydrogen exchanger family A7978_RS02245 PF02417 Chromate transporter A7978_RS02255 PF00924 Mechanosensitive ion channel A7978_RS02255 PF05552 Conserved TM helix A7978_RS02260 PF13439 Glycosyltransferase Family 4 A7978_RS02260 PF00534 Glycosyl transferases group 1 A7978_RS02270 PF08459 UvrC Helix-hairpin-helix N-terminal A7978_RS02270 PF01541 GIY-YIG catalytic domain A7978_RS02315 PF12169 DNA polymerase III subunits gamma and tau domain III A7978_RS02320 PF02575 YbaB/EbfC DNA-binding family A7978_RS02325 PF02132 RecR protein A7978_RS02325 PF00633 Helix-hairpin-helix motif A7978_RS02325 PF13662 Toprim domain A7978_RS02330 PF00334 Nucleoside diphosphate kinase A7978_RS02335 PF02086 D12 class N6 adenine-specific DNA methyltransferase A7978_RS02350 PF00005 ABC transporter A7978_RS02355 PF02578 Multi-copper polyphenol oxidoreductase laccase A7978_RS02360 PF01784 NIF3 (NGG1p interacting factor 3) A7978_RS02365 PF01252 Signal peptidase (SPase) II A7978_RS02380 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) A7978_RS02385 PF01554 MatE A7978_RS02395 PF03144 Elongation factor Tu domain 2 A7978_RS02395 PF00009 Elongation factor Tu GTP binding domain A7978_RS02395 PF03143 Elongation factor Tu C-terminal domain A7978_RS02400 PF00338 Ribosomal protein S10p/S20e A7978_RS02405 PF00297 Ribosomal protein L3 A7978_RS02410 PF00573 Ribosomal protein L4/L1 family A7978_RS02415 PF00276 Ribosomal protein L23 A7978_RS02420 PF00181 Ribosomal Proteins L2, RNA binding domain A7978_RS02420 PF03947 Ribosomal Proteins L2, C-terminal domain A7978_RS02425 PF00203 Ribosomal protein S19 A7978_RS02430 PF00237 Ribosomal protein L22p/L17e A7978_RS02435 PF07650 KH domain A7978_RS02435 PF00189 Ribosomal protein S3, C-terminal domain A7978_RS02440 PF00252 Ribosomal protein L16p/L10e A7978_RS02445 PF00831 Ribosomal L29 protein A7978_RS02450 PF00366 Ribosomal protein S17 A7978_RS02455 PF00238 Ribosomal protein L14p/L23e A7978_RS02460 PF00467 KOW motif A7978_RS02460 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 A7978_RS02465 PF00673 ribosomal L5P family C-terminus A7978_RS02465 PF00281 Ribosomal protein L5 A7978_RS02470 PF00253 Ribosomal protein S14p/S29e A7978_RS02475 PF00410 Ribosomal protein S8 A7978_RS02480 PF00347 Ribosomal protein L6 A7978_RS02485 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast A7978_RS02490 PF00333 Ribosomal protein S5, N-terminal domain A7978_RS02490 PF03719 Ribosomal protein S5, C-terminal domain A7978_RS02495 PF00327 Ribosomal protein L30p/L7e A7978_RS02500 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A A7978_RS02505 PF00344 SecY translocase A7978_RS02510 PF00444 Ribosomal protein L36 A7978_RS02515 PF00416 Ribosomal protein S13/S18 A7978_RS02520 PF00411 Ribosomal protein S11 A7978_RS02525 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain A7978_RS02525 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain A7978_RS02525 PF01000 RNA polymerase Rpb3/RpoA insert domain A7978_RS02530 PF01196 Ribosomal protein L17 A7978_RS02535 PF12072 Domain of unknown function (DUF3552) A7978_RS02535 PF00013 KH domain A7978_RS02535 PF01966 HD domain A7978_RS02540 PF13277 YmdB-like protein A7978_RS02545 PF01479 S4 domain A7978_RS02545 PF01728 FtsJ-like methyltransferase A7978_RS02555 PF01926 50S ribosome-binding GTPase A7978_RS02555 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal A7978_RS02565 PF13419 Haloacid dehalogenase-like hydrolase A7978_RS02575 PF01409 tRNA synthetases class II core domain (F) A7978_RS02580 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain A7978_RS02580 PF03484 tRNA synthetase B5 domain A7978_RS02585 PF07992 Pyridine nucleotide-disulphide oxidoreductase A7978_RS02590 PF08032 RNA 2'-O ribose methyltransferase substrate binding A7978_RS02590 PF00588 SpoU rRNA Methylase family A7978_RS02595 PF00684 DnaJ central domain A7978_RS02595 PF01556 DnaJ C terminal domain A7978_RS02595 PF00226 DnaJ domain A7978_RS02600 PF00012 Hsp70 protein A7978_RS02605 PF01025 GrpE A7978_RS02610 PF02540 NAD synthase A7978_RS02610 PF00795 Carbon-nitrogen hydrolase A7978_RS02615 PF07228 Stage II sporulation protein E (SpoIIE) A7978_RS02615 PF13426 PAS domain A7978_RS02630 PF03309 Type III pantothenate kinase A7978_RS02640 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase A7978_RS02650 PF03099 Biotin/lipoate A/B protein ligase family A7978_RS02650 PF12706 Beta-lactamase superfamily domain A7978_RS02655 PF03372 Endonuclease/Exonuclease/phosphatase family A7978_RS02665 PF00675 Insulinase (Peptidase family M16) A7978_RS02665 PF05193 Peptidase M16 inactive domain A7978_RS02700 PF01027 Inhibitor of apoptosis-promoting Bax1 A7978_RS02705 PF00679 Elongation factor G C-terminus A7978_RS02705 PF14492 Elongation Factor G, domain II A7978_RS02705 PF03764 Elongation factor G, domain IV A7978_RS02705 PF00009 Elongation factor Tu GTP binding domain A7978_RS02705 PF03144 Elongation factor Tu domain 2 A7978_RS02730 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase A7978_RS02730 PF14572 Phosphoribosyl synthetase-associated domain A7978_RS02735 PF00370 FGGY family of carbohydrate kinases, N-terminal domain A7978_RS02735 PF02782 FGGY family of carbohydrate kinases, C-terminal domain A7978_RS02745 PF01121 Dephospho-CoA kinase A7978_RS02750 PF01367 5'-3' exonuclease, C-terminal SAM fold A7978_RS02750 PF00476 DNA polymerase family A A7978_RS02750 PF01612 3'-5' exonuclease A7978_RS02750 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain A7978_RS02765 PF00072 Response regulator receiver domain A7978_RS02770 PF03120 NAD-dependent DNA ligase OB-fold domain A7978_RS02770 PF01653 NAD-dependent DNA ligase adenylation domain A7978_RS02770 PF00533 BRCA1 C Terminus (BRCT) domain A7978_RS02795 PF00381 PTS HPr component phosphorylation site A7978_RS02800 PF02896 PEP-utilising enzyme, TIM barrel domain A7978_RS02800 PF00391 PEP-utilising enzyme, mobile domain A7978_RS02800 PF05524 PEP-utilising enzyme, N-terminal A7978_RS02805 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 A7978_RS02810 PF00183 Hsp90 protein A7978_RS02815 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase A7978_RS02815 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain A7978_RS02835 PF01584 CheW-like domain A7978_RS02845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A7978_RS02845 PF02895 Signal transducing histidine kinase, homodimeric domain A7978_RS02845 PF01584 CheW-like domain A7978_RS02845 PF01627 Hpt domain A7978_RS02845 PF07194 P2 response regulator binding domain A7978_RS02850 PF01339 CheB methylesterase A7978_RS02860 PF01627 Hpt domain A7978_RS02860 PF00072 Response regulator receiver domain A7978_RS02860 PF00512 His Kinase A (phospho-acceptor) domain A7978_RS02860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A7978_RS02860 PF00497 Bacterial extracellular solute-binding proteins, family 3 A7978_RS02865 PF01546 Peptidase family M20/M25/M40 A7978_RS02875 PF00696 Amino acid kinase family A7978_RS02880 PF00535 Glycosyl transferase family 2 A7978_RS02885 PF00005 ABC transporter A7978_RS02895 PF06418 CTP synthase N-terminus A7978_RS02895 PF00117 Glutamine amidotransferase class-I A7978_RS02905 PF00672 HAMP domain A7978_RS02905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A7978_RS02905 PF17202 Single cache domain 3 A7978_RS02910 PF02811 PHP domain A7978_RS02910 PF01336 OB-fold nucleic acid binding domain A7978_RS02910 PF07733 Bacterial DNA polymerase III alpha NTPase domain A7978_RS02910 PF17657 Bacterial DNA polymerase III alpha subunit finger domain A7978_RS02910 PF14579 Helix-hairpin-helix motif A7978_RS02920 PF00270 DEAD/DEAH box helicase A7978_RS02920 PF00271 Helicase conserved C-terminal domain A7978_RS02920 PF17191 RecG wedge domain A7978_RS02930 PF01554 MatE A7978_RS02940 PF08245 Mur ligase middle domain A7978_RS02945 PF02388 FemAB family A7978_RS02950 PF08264 Anticodon-binding domain of tRNA A7978_RS02950 PF09334 tRNA synthetases class I (M) A7978_RS02950 PF01588 Putative tRNA binding domain A7978_RS02955 PF01515 Phosphate acetyl/butaryl transferase A7978_RS02960 PF00398 Ribosomal RNA adenine dimethylase A7978_RS02975 PF00501 AMP-binding enzyme A7978_RS02980 PF00750 tRNA synthetases class I (R) A7978_RS02980 PF03485 Arginyl tRNA synthetase N terminal domain A7978_RS02980 PF05746 DALR anticodon binding domain A7978_RS02990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A7978_RS02990 PF00672 HAMP domain A7978_RS02990 PF12729 Four helix bundle sensory module for signal transduction A7978_RS02995 PF05227 CHASE3 domain A7978_RS02995 PF00672 HAMP domain A7978_RS02995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A7978_RS03000 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain A7978_RS03000 PF01565 FAD binding domain A7978_RS03005 PF01406 tRNA synthetases class I (C) catalytic domain A7978_RS03015 PF00464 Serine hydroxymethyltransferase A7978_RS03020 PF00226 DnaJ domain A7978_RS03020 PF00684 DnaJ central domain A7978_RS03020 PF01556 DnaJ C terminal domain A7978_RS03030 PF02652 L-lactate permease A7978_RS03035 PF07943 Penicillin-binding protein 5, C-terminal domain A7978_RS03035 PF00768 D-alanyl-D-alanine carboxypeptidase A7978_RS03040 PF03975 CheD chemotactic sensory transduction A7978_RS03045 PF07687 Peptidase dimerisation domain A7978_RS03045 PF01546 Peptidase family M20/M25/M40 A7978_RS03070 PF05698 Bacterial trigger factor protein (TF) C-terminus A7978_RS03070 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A7978_RS03070 PF05697 Bacterial trigger factor protein (TF) A7978_RS03075 PF00574 Clp protease A7978_RS03080 PF07724 AAA domain (Cdc48 subfamily) A7978_RS03080 PF06689 ClpX C4-type zinc finger A7978_RS03080 PF10431 C-terminal, D2-small domain, of ClpB protein A7978_RS03085 PF05362 Lon protease (S16) C-terminal proteolytic domain A7978_RS03085 PF02190 ATP-dependent protease La (LON) substrate-binding domain A7978_RS03085 PF00004 ATPase family associated with various cellular activities (AAA) A7978_RS03090 PF01479 S4 domain A7978_RS03090 PF00163 Ribosomal protein S4/S9 N-terminal domain A7978_RS03120 PF00933 Glycosyl hydrolase family 3 N terminal domain A7978_RS03130 PF01965 DJ-1/PfpI family A7978_RS03135 PF00871 Acetokinase family A7978_RS03140 PF02559 CarD-like/TRCF domain A7978_RS03140 PF00271 Helicase conserved C-terminal domain A7978_RS03140 PF03461 TRCF domain A7978_RS03140 PF17757 UvrB interaction domain A7978_RS03140 PF00270 DEAD/DEAH box helicase A7978_RS03150 PF01476 LysM domain A7978_RS03150 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase A7978_RS03160 PF13331 Domain of unknown function (DUF4093) A7978_RS03160 PF01751 Toprim domain A7978_RS03165 PF02127 Aminopeptidase I zinc metalloprotease (M18) A7978_RS03175 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A7978_RS03175 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit A7978_RS03180 PF00294 pfkB family carbohydrate kinase A7978_RS03190 PF13538 UvrD-like helicase C-terminal domain A7978_RS03195 PF12705 PD-(D/E)XK nuclease superfamily A7978_RS03195 PF00580 UvrD/REP helicase N-terminal domain A7978_RS03195 PF13361 UvrD-like helicase C-terminal domain A7978_RS03200 PF17946 RecC C-terminal domain A7978_RS03205 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain A7978_RS03205 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain A7978_RS03205 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family A7978_RS03210 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain A7978_RS03210 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain A7978_RS03220 PF03553 Na+/H+ antiporter family A7978_RS03230 PF00528 Binding-protein-dependent transport system inner membrane component A7978_RS03235 PF00528 Binding-protein-dependent transport system inner membrane component A7978_RS03240 PF00005 ABC transporter A7978_RS03240 PF08402 TOBE domain A7978_RS03245 PF01926 50S ribosome-binding GTPase A7978_RS03250 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase A7978_RS03255 PF02378 Phosphotransferase system, EIIC A7978_RS03255 PF00367 phosphotransferase system, EIIB A7978_RS03255 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 A7978_RS03275 PF00118 TCP-1/cpn60 chaperonin family A7978_RS03285 PF02699 Preprotein translocase subunit A7978_RS03290 PF02355 Protein export membrane protein A7978_RS03295 PF02355 Protein export membrane protein A7978_RS03305 PF00226 DnaJ domain A7978_RS03305 PF00684 DnaJ central domain A7978_RS03305 PF01556 DnaJ C terminal domain A7978_RS03310 PF04055 Radical SAM superfamily A7978_RS03310 PF06969 HemN C-terminal domain A7978_RS03315 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) A7978_RS03320 PF00300 Histidine phosphatase superfamily (branch 1) A7978_RS03325 PF01921 tRNA synthetases class I (K) A7978_RS03330 PF07650 KH domain A7978_RS03330 PF01926 50S ribosome-binding GTPase A7978_RS03360 PF08239 Bacterial SH3 domain A7978_RS03360 PF01520 N-acetylmuramoyl-L-alanine amidase A7978_RS03370 PF04620 Flagellar filament outer layer protein Flaa A7978_RS03375 PF01584 CheW-like domain A7978_RS03375 PF07194 P2 response regulator binding domain A7978_RS03375 PF01627 Hpt domain A7978_RS03375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A7978_RS03375 PF02895 Signal transducing histidine kinase, homodimeric domain A7978_RS03380 PF01584 CheW-like domain A7978_RS03390 PF00072 Response regulator receiver domain A7978_RS03410 PF13419 Haloacid dehalogenase-like hydrolase A7978_RS03415 PF00005 ABC transporter A7978_RS03420 PF02653 Branched-chain amino acid transport system / permease component A7978_RS03425 PF02653 Branched-chain amino acid transport system / permease component A7978_RS03430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A7978_RS03430 PF02203 Tar ligand binding domain homologue A7978_RS03430 PF00672 HAMP domain A7978_RS03435 PF02203 Tar ligand binding domain homologue A7978_RS03435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A7978_RS03435 PF00672 HAMP domain A7978_RS03445 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal A7978_RS03445 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal A7978_RS03450 PF01070 FMN-dependent dehydrogenase A7978_RS03455 PF00368 Hydroxymethylglutaryl-coenzyme A reductase A7978_RS03480 PF00188 Cysteine-rich secretory protein family A7978_RS03490 PF14492 Elongation Factor G, domain II A7978_RS03490 PF03144 Elongation factor Tu domain 2 A7978_RS03490 PF00679 Elongation factor G C-terminus A7978_RS03490 PF00009 Elongation factor Tu GTP binding domain A7978_RS03490 PF03764 Elongation factor G, domain IV A7978_RS03500 PF02978 Signal peptide binding domain A7978_RS03500 PF00448 SRP54-type protein, GTPase domain A7978_RS03500 PF02881 SRP54-type protein, helical bundle domain A7978_RS03505 PF00886 Ribosomal protein S16 A7978_RS03515 PF01782 RimM N-terminal domain A7978_RS03520 PF01746 tRNA (Guanine-1)-methyltransferase A7978_RS03525 PF01245 Ribosomal protein L19 A7978_RS03545 PF01467 Cytidylyltransferase-like A7978_RS03550 PF01783 Ribosomal L32p protein family A7978_RS03555 PF00550 Phosphopantetheine attachment site A7978_RS03560 PF00035 Double-stranded RNA binding motif A7978_RS03560 PF14622 Ribonuclease-III-like A7978_RS03565 PF01743 Poly A polymerase head domain A7978_RS03565 PF12627 Probable RNA and SrmB- binding site of polymerase A A7978_RS03565 PF13735 tRNA nucleotidyltransferase domain 2 putative A7978_RS03590 PF02618 YceG-like family A7978_RS03595 PF13662 Toprim domain A7978_RS03595 PF10410 DnaB-helicase binding domain of primase A7978_RS03595 PF08275 DNA primase catalytic core, N-terminal domain A7978_RS03595 PF01807 CHC2 zinc finger A7978_RS03600 PF04542 Sigma-70 region 2 A7978_RS03600 PF04545 Sigma-70, region 4 A7978_RS03600 PF04539 Sigma-70 region 3 A7978_RS03600 PF03979 Sigma-70 factor, region 1.1 A7978_RS03600 PF00140 Sigma-70 factor, region 1.2 A7978_RS03635 PF03717 Penicillin-binding Protein dimerisation domain A7978_RS03635 PF00905 Penicillin binding protein transpeptidase domain A7978_RS03640 PF01098 Cell cycle protein A7978_RS03645 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain A7978_RS03645 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A7978_RS03645 PF03129 Anticodon binding domain A7978_RS03650 PF01066 CDP-alcohol phosphatidyltransferase A7978_RS03665 PF02386 Cation transport protein A7978_RS03675 PF10609 NUBPL iron-transfer P-loop NTPase A7978_RS03680 PF00365 Phosphofructokinase A7978_RS03685 PF07992 Pyridine nucleotide-disulphide oxidoreductase A7978_RS03685 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A7978_RS03690 PF00375 Sodium:dicarboxylate symporter family A7978_RS03695 PF00342 Phosphoglucose isomerase A7978_RS03700 PF17762 HTH domain found in ParB protein A7978_RS03700 PF02195 ParB-like nuclease domain A7978_RS03705 PF17092 Penicillin-binding protein OB-like domain A7978_RS03705 PF00912 Transglycosylase A7978_RS03705 PF00905 Penicillin binding protein transpeptidase domain A7978_RS03720 PF01300 Telomere recombination A7978_RS03720 PF03481 Putative GTP-binding controlling metal-binding A7978_RS03725 PF03330 Lytic transglycolase A7978_RS03725 PF05036 Sporulation related domain A7978_RS03730 PF13307 Helicase C-terminal domain A7978_RS03730 PF06733 DEAD_2 A7978_RS03740 PF01207 Dihydrouridine synthase (Dus) A7978_RS03745 PF10458 Valyl tRNA synthetase tRNA binding arm A7978_RS03745 PF00133 tRNA synthetases class I (I, L, M and V) A7978_RS03745 PF08264 Anticodon-binding domain of tRNA A7978_RS03750 PF01266 FAD dependent oxidoreductase A7978_RS03750 PF05430 S-adenosyl-L-methionine-dependent methyltransferase A7978_RS03755 PF00166 Chaperonin 10 Kd subunit A7978_RS03760 PF12848 ABC transporter A7978_RS03760 PF00005 ABC transporter A7978_RS03785 PF00730 HhH-GPD superfamily base excision DNA repair protein A7978_RS03785 PF00633 Helix-hairpin-helix motif A7978_RS03795 PF00528 Binding-protein-dependent transport system inner membrane component A7978_RS03820 PF09822 ABC-type uncharacterized transport system A7978_RS03830 PF00005 ABC transporter A7978_RS03835 PF12706 Beta-lactamase superfamily domain A7978_RS03835 PF00753 Metallo-beta-lactamase superfamily A7978_RS03840 PF01266 FAD dependent oxidoreductase A7978_RS03845 PF00574 Clp protease A7978_RS03870 PF01551 Peptidase family M23 A7978_RS03875 PF02954 Bacterial regulatory protein, Fis family A7978_RS03875 PF00158 Sigma-54 interaction domain A7978_RS03875 PF00072 Response regulator receiver domain A7978_RS03880 PF00989 PAS fold A7978_RS03880 PF00512 His Kinase A (phospho-acceptor) domain A7978_RS03880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A7978_RS03885 PF09115 DNA polymerase III, delta subunit, C terminal A7978_RS03895 PF03033 Glycosyltransferase family 28 N-terminal domain A7978_RS03895 PF04101 Glycosyltransferase family 28 C-terminal domain A7978_RS03900 PF08543 Phosphomethylpyrimidine kinase A7978_RS03905 PF00814 Glycoprotease family A7978_RS03915 PF03979 Sigma-70 factor, region 1.1 A7978_RS03915 PF04545 Sigma-70, region 4 A7978_RS03915 PF04539 Sigma-70 region 3 A7978_RS03915 PF04542 Sigma-70 region 2 A7978_RS03915 PF00140 Sigma-70 factor, region 1.2 A7978_RS03920 PF10135 Rod binding protein A7978_RS03925 PF02119 Flagellar P-ring protein A7978_RS03935 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A7978_RS03935 PF00460 Flagella basal body rod protein A7978_RS03940 PF00460 Flagella basal body rod protein A7978_RS03940 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A7978_RS03950 PF00156 Phosphoribosyl transferase domain A7978_RS03955 PF00829 Ribosomal prokaryotic L21 protein A7978_RS03965 PF01016 Ribosomal L27 protein A7978_RS03970 PF01018 GTP1/OBG A7978_RS03970 PF01926 50S ribosome-binding GTPase A7978_RS03975 PF01467 Cytidylyltransferase-like A7978_RS03990 PF04026 SpoVG A7978_RS04000 PF01386 Ribosomal L25p family A7978_RS04000 PF14693 Ribosomal protein TL5, C-terminal domain A7978_RS04005 PF01195 Peptidyl-tRNA hydrolase A7978_RS04010 PF01171 PP-loop family A7978_RS04015 PF06480 FtsH Extracellular A7978_RS04015 PF00004 ATPase family associated with various cellular activities (AAA) A7978_RS04015 PF17862 AAA+ lid domain A7978_RS04015 PF01434 Peptidase family M41 A7978_RS04025 PF17820 PDZ domain A7978_RS04025 PF13180 PDZ domain A7978_RS04040 PF02223 Thymidylate kinase A7978_RS04050 PF01103 Surface antigen A7978_RS04050 PF07244 Surface antigen variable number repeat A7978_RS04065 PF01624 MutS domain I A7978_RS04065 PF05188 MutS domain II A7978_RS04065 PF05192 MutS domain III A7978_RS04065 PF05190 MutS family domain IV A7978_RS04065 PF00488 MutS domain V A7978_RS04070 PF00156 Phosphoribosyl transferase domain A7978_RS04075 PF02576 RimP N-terminal domain A7978_RS04080 PF00575 S1 RNA binding domain A7978_RS04080 PF13184 NusA-like KH domain A7978_RS04080 PF08529 NusA N-terminal domain A7978_RS04085 PF00009 Elongation factor Tu GTP binding domain A7978_RS04085 PF11987 Translation-initiation factor 2 A7978_RS04085 PF04760 Translation initiation factor IF-2, N-terminal region A7978_RS04090 PF02033 Ribosome-binding factor A A7978_RS04095 PF01509 TruB family pseudouridylate synthase (N terminal domain) A7978_RS04100 PF00312 Ribosomal protein S15 A7978_RS04105 PF01138 3' exoribonuclease family, domain 1 A7978_RS04105 PF03725 3' exoribonuclease family, domain 2 A7978_RS04105 PF00575 S1 RNA binding domain A7978_RS04105 PF00013 KH domain A7978_RS04105 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain A7978_RS04125 PF01702 Queuine tRNA-ribosyltransferase A7978_RS04130 PF03023 Lipid II flippase MurJ A7978_RS04140 PF02441 Flavoprotein A7978_RS04140 PF04127 DNA / pantothenate metabolism flavoprotein A7978_RS04150 PF00474 Sodium:solute symporter family A7978_RS04155 PF00849 RNA pseudouridylate synthase A7978_RS04165 PF02875 Mur ligase family, glutamate ligase domain A7978_RS04165 PF01225 Mur ligase family, catalytic domain A7978_RS04165 PF08245 Mur ligase middle domain A7978_RS04210 PF02378 Phosphotransferase system, EIIC A7978_RS04210 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 A7978_RS04210 PF00367 phosphotransferase system, EIIB A7978_RS04215 PF04408 Helicase associated domain (HA2) A7978_RS04215 PF00271 Helicase conserved C-terminal domain A7978_RS04215 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold A7978_RS04215 PF00270 DEAD/DEAH box helicase A7978_RS04220 PF13368 Topoisomerase C-terminal repeat A7978_RS04220 PF01131 DNA topoisomerase A7978_RS04220 PF01751 Toprim domain A7978_RS04225 PF00149 Calcineurin-like phosphoesterase A7978_RS04230 PF13476 AAA domain A7978_RS04235 PF00480 ROK family A7978_RS04240 PF03932 CutC family A7978_RS04250 PF00133 tRNA synthetases class I (I, L, M and V) A7978_RS04250 PF08264 Anticodon-binding domain of tRNA A7978_RS04255 PF17871 AAA lid domain A7978_RS04255 PF07724 AAA domain (Cdc48 subfamily) A7978_RS04255 PF02861 Clp amino terminal domain, pathogenicity island component A7978_RS04255 PF10431 C-terminal, D2-small domain, of ClpB protein A7978_RS04255 PF00004 ATPase family associated with various cellular activities (AAA) A7978_RS04260 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A7978_RS04260 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A7978_RS04260 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A7978_RS04260 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A7978_RS04265 PF00271 Helicase conserved C-terminal domain A7978_RS04265 PF12344 Ultra-violet resistance protein B A7978_RS04265 PF02151 UvrB/uvrC motif A7978_RS04265 PF04851 Type III restriction enzyme, res subunit A7978_RS04265 PF17757 UvrB interaction domain A7978_RS04270 PF17755 UvrA DNA-binding domain A7978_RS04270 PF17760 UvrA interaction domain A7978_RS04270 PF00005 ABC transporter A7978_RS04300 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain A7978_RS04300 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain A7978_RS04305 PF03606 C4-dicarboxylate anaerobic carrier A7978_RS04310 PF00696 Amino acid kinase family A7978_RS04330 PF01594 AI-2E family transporter A7978_RS04335 PF00579 tRNA synthetases class I (W and Y) A7978_RS04625 PF00268 Ribonucleotide reductase, small chain A7978_RS04630 PF08343 Ribonucleotide reductase N-terminal A7978_RS04630 PF02867 Ribonucleotide reductase, barrel domain A7978_RS04630 PF00317 Ribonucleotide reductase, all-alpha domain A7978_RS04635 PF07972 NrdI Flavodoxin like A7978_RS04640 PF02511 Thymidylate synthase complementing protein A7978_RS04785 PF17044 Borrelial persistence in ticks protein A A7978_RS04875 PF13614 AAA domain A7978_RS05240 PF00921 Borrelia lipoprotein A7978_RS05250 PF00921 Borrelia lipoprotein A7978_RS05255 PF00921 Borrelia lipoprotein A7978_RS05270 PF00921 Borrelia lipoprotein A7978_RS05285 PF13614 AAA domain A7978_RS05320 PF03304 Mlp lipoprotein family A7978_RS05345 PF00921 Borrelia lipoprotein A7978_RS05360 PF00921 Borrelia lipoprotein A7978_RS05400 PF00921 Borrelia lipoprotein A7978_RS05410 PF00921 Borrelia lipoprotein A7978_RS05420 PF00921 Borrelia lipoprotein A7978_RS05435 PF13614 AAA domain A7978_RS05510 PF01441 Lipoprotein A7978_RS05520 PF01441 Lipoprotein A7978_RS05525 PF00921 Borrelia lipoprotein A7978_RS05535 PF01441 Lipoprotein A7978_RS05540 PF00921 Borrelia lipoprotein A7978_RS05560 PF02511 Thymidylate synthase complementing protein A7978_RS05575 PF00921 Borrelia lipoprotein A7978_RS05580 PF00921 Borrelia lipoprotein A7978_RS05585 PF01441 Lipoprotein A7978_RS05590 PF00921 Borrelia lipoprotein A7978_RS05595 PF01441 Lipoprotein A7978_RS05600 PF00921 Borrelia lipoprotein A7978_RS05605 PF00921 Borrelia lipoprotein A7978_RS05610 PF01441 Lipoprotein A7978_RS05615 PF00921 Borrelia lipoprotein A7978_RS05635 PF03304 Mlp lipoprotein family A7978_RS05640 PF00921 Borrelia lipoprotein A7978_RS05650 PF00921 Borrelia lipoprotein A7978_RS05665 PF13614 AAA domain A7978_RS05675 PF00921 Borrelia lipoprotein A7978_RS05680 PF00921 Borrelia lipoprotein A7978_RS05690 PF01441 Lipoprotein A7978_RS05695 PF00921 Borrelia lipoprotein A7978_RS05700 PF00921 Borrelia lipoprotein A7978_RS05710 PF00921 Borrelia lipoprotein A7978_RS05715 PF00921 Borrelia lipoprotein A7978_RS05720 PF00921 Borrelia lipoprotein A7978_RS05780 PF00478 IMP dehydrogenase / GMP reductase domain A7978_RS05790 PF01048 Phosphorylase superfamily A7978_RS05795 PF01979 Amidohydrolase family A7978_RS05795 PF13382 Adenine deaminase C-terminal domain A7978_RS05805 PF00860 Permease family A7978_RS05830 PF12796 Ankyrin repeats (3 copies) A7978_RS05835 PF02378 Phosphotransferase system, EIIC A7978_RS05835 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 A7978_RS05835 PF00367 phosphotransferase system, EIIB A7978_RS05840 PF02378 Phosphotransferase system, EIIC A7978_RS05840 PF00367 phosphotransferase system, EIIB A7978_RS05840 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 A7978_RS05845 PF00708 Acylphosphatase A7978_RS05855 PF16684 Telomere resolvase A7978_RS05875 PF13614 AAA domain A7978_RS05890 PF01441 Lipoprotein A7978_RS05895 PF00921 Borrelia lipoprotein A7978_RS05900 PF01441 Lipoprotein A7978_RS05915 PF00921 Borrelia lipoprotein A7978_RS05920 PF00921 Borrelia lipoprotein A7978_RS05930 PF00921 Borrelia lipoprotein A7978_RS05935 PF00921 Borrelia lipoprotein A7978_RS05940 PF00921 Borrelia lipoprotein A7978_RS05985 PF00921 Borrelia lipoprotein A7978_RS05990 PF00921 Borrelia lipoprotein A7978_RS05995 PF01441 Lipoprotein A7978_RS06005 PF00921 Borrelia lipoprotein A7978_RS06010 PF00921 Borrelia lipoprotein A7978_RS06015 PF00921 Borrelia lipoprotein A7978_RS06025 PF00921 Borrelia lipoprotein A7978_RS06030 PF00921 Borrelia lipoprotein A7978_RS06045 PF00921 Borrelia lipoprotein A7978_RS06050 PF00921 Borrelia lipoprotein A7978_RS06060 PF00921 Borrelia lipoprotein A7978_RS06065 PF01441 Lipoprotein A7978_RS06075 PF00921 Borrelia lipoprotein A7978_RS06085 PF00921 Borrelia lipoprotein A7978_RS06090 PF00921 Borrelia lipoprotein A7978_RS06100 PF00921 Borrelia lipoprotein A7978_RS06135 PF13614 AAA domain A7978_RS06165 PF00921 Borrelia lipoprotein A7978_RS06180 PF00921 Borrelia lipoprotein