locus-tag class description BAFPKO_RS00010 PF00933 Glycosyl hydrolase family 3 N terminal domain BAFPKO_RS00025 PF00579 tRNA synthetases class I (W and Y) BAFPKO_RS00030 PF01594 AI-2E family transporter BAFPKO_RS00040 PF02457 DisA bacterial checkpoint controller nucleotide-binding BAFPKO_RS00045 PF07949 YbbR-like protein BAFPKO_RS00050 PF01648 4'-phosphopantetheinyl transferase superfamily BAFPKO_RS00055 PF09986 Uncharacterized protein conserved in bacteria (DUF2225) BAFPKO_RS00060 PF01416 tRNA pseudouridine synthase BAFPKO_RS00070 PF04851 Type III restriction enzyme, res subunit BAFPKO_RS00070 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BAFPKO_RS00070 PF18074 Primosomal protein N C-terminal domain BAFPKO_RS00070 PF17764 3′ DNA-binding domain (3′BD) BAFPKO_RS00070 PF00271 Helicase conserved C-terminal domain BAFPKO_RS00075 PF00485 Phosphoribulokinase / Uridine kinase family BAFPKO_RS00085 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BAFPKO_RS00085 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BAFPKO_RS00090 PF00849 RNA pseudouridylate synthase BAFPKO_RS00100 PF00365 Phosphofructokinase BAFPKO_RS00105 PF02547 Queuosine biosynthesis protein BAFPKO_RS00110 PF17864 RuvB AAA lid domain BAFPKO_RS00110 PF05491 RuvB C-terminal winged helix domain BAFPKO_RS00110 PF05496 Holliday junction DNA helicase RuvB P-loop domain BAFPKO_RS00115 PF01330 RuvA N terminal domain BAFPKO_RS00120 PF07995 Glucose / Sorbosone dehydrogenase BAFPKO_RS00125 PF01709 Transcriptional regulator BAFPKO_RS00130 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BAFPKO_RS00130 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BAFPKO_RS00145 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BAFPKO_RS00155 PF10502 Signal peptidase, peptidase S26 BAFPKO_RS00160 PF03781 Sulfatase-modifying factor enzyme 1 BAFPKO_RS00160 PF08308 PEGA domain BAFPKO_RS00165 PF01668 SmpB protein BAFPKO_RS00175 PF00521 DNA gyrase/topoisomerase IV, subunit A BAFPKO_RS00180 PF01751 Toprim domain BAFPKO_RS00180 PF00986 DNA gyrase B subunit, carboxyl terminus BAFPKO_RS00180 PF00204 DNA gyrase B BAFPKO_RS00180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAFPKO_RS00185 PF01553 Acyltransferase BAFPKO_RS00200 PF03705 CheR methyltransferase, all-alpha domain BAFPKO_RS00200 PF01739 CheR methyltransferase, SAM binding domain BAFPKO_RS00205 PF01895 PhoU domain BAFPKO_RS00220 PF02463 RecF/RecN/SMC N terminal domain BAFPKO_RS00220 PF06470 SMC proteins Flexible Hinge Domain BAFPKO_RS00225 PF01351 Ribonuclease HII BAFPKO_RS00240 PF02592 Putative vitamin uptake transporter BAFPKO_RS00250 PF00588 SpoU rRNA Methylase family BAFPKO_RS00255 PF03167 Uracil DNA glycosylase superfamily BAFPKO_RS00260 PF03840 Preprotein translocase SecG subunit BAFPKO_RS00265 PF00121 Triosephosphate isomerase BAFPKO_RS00270 PF00162 Phosphoglycerate kinase BAFPKO_RS00275 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BAFPKO_RS00275 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BAFPKO_RS00285 PF03471 Transporter associated domain BAFPKO_RS00285 PF00571 CBS domain BAFPKO_RS00290 PF02130 Uncharacterized protein family UPF0054 BAFPKO_RS00295 PF00085 Thioredoxin BAFPKO_RS00300 PF04452 RNA methyltransferase BAFPKO_RS00305 PF03793 PASTA domain BAFPKO_RS00310 PF02911 Formyl transferase, C-terminal domain BAFPKO_RS00310 PF00551 Formyl transferase BAFPKO_RS00315 PF01327 Polypeptide deformylase BAFPKO_RS00325 PF00557 Metallopeptidase family M24 BAFPKO_RS00325 PF01321 Creatinase/Prolidase N-terminal domain BAFPKO_RS00335 PF02073 Thermophilic metalloprotease (M29) BAFPKO_RS00360 PF03462 PCRF domain BAFPKO_RS00360 PF00472 RF-1 domain BAFPKO_RS00370 PF02881 SRP54-type protein, helical bundle domain BAFPKO_RS00370 PF00448 SRP54-type protein, GTPase domain BAFPKO_RS00380 PF12704 MacB-like periplasmic core domain BAFPKO_RS00380 PF02687 FtsX-like permease family BAFPKO_RS00385 PF00005 ABC transporter BAFPKO_RS00405 PF00266 Aminotransferase class-V BAFPKO_RS00410 PF01592 NifU-like N terminal domain BAFPKO_RS00415 PF13335 Magnesium chelatase, subunit ChlI C-terminal BAFPKO_RS00415 PF01078 Magnesium chelatase, subunit ChlI BAFPKO_RS00420 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BAFPKO_RS00420 PF00056 lactate/malate dehydrogenase, NAD binding domain BAFPKO_RS00425 PF06421 GTP-binding protein LepA C-terminus BAFPKO_RS00425 PF03144 Elongation factor Tu domain 2 BAFPKO_RS00425 PF00009 Elongation factor Tu GTP binding domain BAFPKO_RS00425 PF00679 Elongation factor G C-terminus BAFPKO_RS00425 PF14492 Elongation Factor G, domain II BAFPKO_RS00445 PF01813 ATP synthase subunit D BAFPKO_RS00450 PF02874 ATP synthase alpha/beta family, beta-barrel domain BAFPKO_RS00450 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BAFPKO_RS00455 PF16886 ATPsynthase alpha/beta subunit N-term extension BAFPKO_RS00455 PF02874 ATP synthase alpha/beta family, beta-barrel domain BAFPKO_RS00455 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BAFPKO_RS00475 PF00488 MutS domain V BAFPKO_RS00475 PF01713 Smr domain BAFPKO_RS00480 PF03193 RsgA GTPase BAFPKO_RS00485 PF01177 Asp/Glu/Hydantoin racemase BAFPKO_RS00490 PF01336 OB-fold nucleic acid binding domain BAFPKO_RS00490 PF00152 tRNA synthetases class II (D, K and N) BAFPKO_RS00505 PF00595 PDZ domain BAFPKO_RS00510 PF00557 Metallopeptidase family M24 BAFPKO_RS00520 PF01029 NusB family BAFPKO_RS00530 PF00108 Thiolase, N-terminal domain BAFPKO_RS00530 PF02803 Thiolase, C-terminal domain BAFPKO_RS00540 PF00772 DnaB-like helicase N terminal domain BAFPKO_RS00540 PF03796 DnaB-like helicase C terminal domain BAFPKO_RS00545 PF03948 Ribosomal protein L9, C-terminal domain BAFPKO_RS00545 PF01281 Ribosomal protein L9, N-terminal domain BAFPKO_RS00550 PF01084 Ribosomal protein S18 BAFPKO_RS00555 PF00436 Single-strand binding protein family BAFPKO_RS00560 PF01250 Ribosomal protein S6 BAFPKO_RS00565 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BAFPKO_RS00565 PF02378 Phosphotransferase system, EIIC BAFPKO_RS00565 PF00367 phosphotransferase system, EIIB BAFPKO_RS00570 PF03006 Haemolysin-III related BAFPKO_RS00575 PF02163 Peptidase family M50 BAFPKO_RS00575 PF17820 PDZ domain BAFPKO_RS00585 PF01255 Putative undecaprenyl diphosphate synthase BAFPKO_RS00590 PF01765 Ribosome recycling factor BAFPKO_RS00595 PF00889 Elongation factor TS BAFPKO_RS00600 PF00318 Ribosomal protein S2 BAFPKO_RS00620 PF00575 S1 RNA binding domain BAFPKO_RS00625 PF02224 Cytidylate kinase BAFPKO_RS00630 PF01479 S4 domain BAFPKO_RS00630 PF00849 RNA pseudouridylate synthase BAFPKO_RS00640 PF00154 recA bacterial DNA recombination protein BAFPKO_RS00645 PF01272 Transcription elongation factor, GreA/GreB, C-term BAFPKO_RS00645 PF03449 Transcription elongation factor, N-terminal BAFPKO_RS00660 PF03129 Anticodon binding domain BAFPKO_RS00660 PF13393 Histidyl-tRNA synthetase BAFPKO_RS00665 PF03793 PASTA domain BAFPKO_RS00665 PF03717 Penicillin-binding Protein dimerisation domain BAFPKO_RS00665 PF00905 Penicillin binding protein transpeptidase domain BAFPKO_RS00670 PF00501 AMP-binding enzyme BAFPKO_RS00680 PF00873 AcrB/AcrD/AcrF family BAFPKO_RS00695 PF01809 Putative membrane protein insertion efficiency factor BAFPKO_RS00700 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BAFPKO_RS00705 PF00528 Binding-protein-dependent transport system inner membrane component BAFPKO_RS00710 PF00005 ABC transporter BAFPKO_RS00710 PF00571 CBS domain BAFPKO_RS00715 PF00700 Bacterial flagellin C-terminal helical region BAFPKO_RS00715 PF00460 Flagella basal body rod protein BAFPKO_RS00715 PF00669 Bacterial flagellin N-terminal helical region BAFPKO_RS00720 PF02465 Flagellar hook-associated protein 2 N-terminus BAFPKO_RS00720 PF07195 Flagellar hook-associated protein 2 C-terminus BAFPKO_RS00725 PF01979 Amidohydrolase family BAFPKO_RS00730 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BAFPKO_RS00735 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BAFPKO_RS00735 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BAFPKO_RS00740 PF02810 SEC-C motif BAFPKO_RS00740 PF07517 SecA DEAD-like domain BAFPKO_RS00740 PF07516 SecA Wing and Scaffold domain BAFPKO_RS00740 PF01043 SecA preprotein cross-linking domain BAFPKO_RS00770 PF01168 Alanine racemase, N-terminal domain BAFPKO_RS00770 PF00842 Alanine racemase, C-terminal domain BAFPKO_RS00785 PF01699 Sodium/calcium exchanger protein BAFPKO_RS00795 PF02446 4-alpha-glucanotransferase BAFPKO_RS00810 PF01176 Translation initiation factor 1A / IF-1 BAFPKO_RS00830 PF00092 von Willebrand factor type A domain BAFPKO_RS00845 PF07726 ATPase family associated with various cellular activities (AAA) BAFPKO_RS00845 PF17863 AAA lid domain BAFPKO_RS00850 PF02527 rRNA small subunit methyltransferase G BAFPKO_RS00855 PF01134 Glucose inhibited division protein A BAFPKO_RS00855 PF13932 GidA associated domain BAFPKO_RS00860 PF01926 50S ribosome-binding GTPase BAFPKO_RS00860 PF10396 GTP-binding protein TrmE N-terminus BAFPKO_RS00860 PF12631 MnmE helical domain BAFPKO_RS00870 PF07196 Flagellin hook IN motif BAFPKO_RS00870 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BAFPKO_RS00875 PF00669 Bacterial flagellin N-terminal helical region BAFPKO_RS00875 PF00700 Bacterial flagellin C-terminal helical region BAFPKO_RS00880 PF02623 FliW protein BAFPKO_RS00885 PF02599 Global regulator protein family BAFPKO_RS00895 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BAFPKO_RS00905 PF00453 Ribosomal protein L20 BAFPKO_RS00910 PF01632 Ribosomal protein L35 BAFPKO_RS00915 PF05198 Translation initiation factor IF-3, N-terminal domain BAFPKO_RS00915 PF00707 Translation initiation factor IF-3, C-terminal domain BAFPKO_RS00930 PF01026 TatD related DNase BAFPKO_RS00940 PF03462 PCRF domain BAFPKO_RS00940 PF00472 RF-1 domain BAFPKO_RS00945 PF05175 Methyltransferase small domain BAFPKO_RS00950 PF02824 TGS domain BAFPKO_RS00950 PF04607 Region found in RelA / SpoT proteins BAFPKO_RS00960 PF07478 D-ala D-ala ligase C-terminus BAFPKO_RS00960 PF01820 D-ala D-ala ligase N-terminus BAFPKO_RS00965 PF01225 Mur ligase family, catalytic domain BAFPKO_RS00965 PF02875 Mur ligase family, glutamate ligase domain BAFPKO_RS00965 PF08245 Mur ligase middle domain BAFPKO_RS00975 PF01595 Cyclin M transmembrane N-terminal domain BAFPKO_RS00975 PF03471 Transporter associated domain BAFPKO_RS00975 PF00571 CBS domain BAFPKO_RS00980 PF01145 SPFH domain / Band 7 family BAFPKO_RS00985 PF01145 SPFH domain / Band 7 family BAFPKO_RS01010 PF00483 Nucleotidyl transferase BAFPKO_RS01030 PF08676 MutL C terminal dimerisation domain BAFPKO_RS01030 PF01119 DNA mismatch repair protein, C-terminal domain BAFPKO_RS01050 PF01132 Elongation factor P (EF-P) OB domain BAFPKO_RS01050 PF09285 Elongation factor P, C-terminal BAFPKO_RS01050 PF08207 Elongation factor P (EF-P) KOW-like domain BAFPKO_RS01055 PF12849 PBP superfamily domain BAFPKO_RS01060 PF00528 Binding-protein-dependent transport system inner membrane component BAFPKO_RS01065 PF00528 Binding-protein-dependent transport system inner membrane component BAFPKO_RS01070 PF00005 ABC transporter BAFPKO_RS01075 PF02535 ZIP Zinc transporter BAFPKO_RS01080 PF01411 tRNA synthetases class II (A) BAFPKO_RS01080 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BAFPKO_RS01085 PF14842 FliG N-terminal domain BAFPKO_RS01085 PF14841 FliG middle domain BAFPKO_RS01085 PF01706 FliG C-terminal domain BAFPKO_RS01090 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BAFPKO_RS01100 PF01207 Dihydrouridine synthase (Dus) BAFPKO_RS01105 PF02403 Seryl-tRNA synthetase N-terminal domain BAFPKO_RS01105 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BAFPKO_RS01115 PF00675 Insulinase (Peptidase family M16) BAFPKO_RS01115 PF05193 Peptidase M16 inactive domain BAFPKO_RS01115 PF08367 Peptidase M16C associated BAFPKO_RS01120 PF01197 Ribosomal protein L31 BAFPKO_RS01125 PF07497 Rho termination factor, RNA-binding domain BAFPKO_RS01125 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BAFPKO_RS01135 PF00216 Bacterial DNA-binding protein BAFPKO_RS01140 PF01649 Ribosomal protein S20 BAFPKO_RS01150 PF01926 50S ribosome-binding GTPase BAFPKO_RS01150 PF06071 Protein of unknown function (DUF933) BAFPKO_RS01160 PF00795 Carbon-nitrogen hydrolase BAFPKO_RS01170 PF01712 Deoxynucleoside kinase BAFPKO_RS01175 PF00230 Major intrinsic protein BAFPKO_RS01180 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BAFPKO_RS01180 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BAFPKO_RS01190 PF01266 FAD dependent oxidoreductase BAFPKO_RS01190 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BAFPKO_RS01205 PF01551 Peptidase family M23 BAFPKO_RS01210 PF01725 Ham1 family BAFPKO_RS01215 PF08439 Oligopeptidase F BAFPKO_RS01215 PF01432 Peptidase family M3 BAFPKO_RS01225 PF09335 SNARE associated Golgi protein BAFPKO_RS01235 PF09334 tRNA synthetases class I (M) BAFPKO_RS01235 PF00133 tRNA synthetases class I (I, L, M and V) BAFPKO_RS01235 PF08264 Anticodon-binding domain of tRNA BAFPKO_RS01235 PF13603 Leucyl-tRNA synthetase, Domain 2 BAFPKO_RS01245 PF05362 Lon protease (S16) C-terminal proteolytic domain BAFPKO_RS01245 PF00004 ATPase family associated with various cellular activities (AAA) BAFPKO_RS01245 PF02190 ATP-dependent protease La (LON) substrate-binding domain BAFPKO_RS01250 PF01368 DHH family BAFPKO_RS01250 PF02272 DHHA1 domain BAFPKO_RS01250 PF17768 RecJ OB domain BAFPKO_RS01255 PF01551 Peptidase family M23 BAFPKO_RS01255 PF08525 Opacity-associated protein A N-terminal motif BAFPKO_RS01255 PF01476 LysM domain BAFPKO_RS01260 PF01165 Ribosomal protein S21 BAFPKO_RS01265 PF17854 FtsK alpha domain BAFPKO_RS01265 PF01580 FtsK/SpoIIIE family BAFPKO_RS01265 PF09397 Ftsk gamma domain BAFPKO_RS01270 PF02673 Bacitracin resistance protein BacA BAFPKO_RS01275 PF01464 Transglycosylase SLT domain BAFPKO_RS01275 PF14718 Soluble lytic murein transglycosylase L domain BAFPKO_RS01290 PF01551 Peptidase family M23 BAFPKO_RS01290 PF08460 Bacterial SH3 domain BAFPKO_RS01295 PF10502 Signal peptidase, peptidase S26 BAFPKO_RS01300 PF00012 Hsp70 protein BAFPKO_RS01325 PF10609 NUBPL iron-transfer P-loop NTPase BAFPKO_RS01330 PF00448 SRP54-type protein, GTPase domain BAFPKO_RS01335 PF00771 FHIPEP family BAFPKO_RS01340 PF01312 FlhB HrpN YscU SpaS Family BAFPKO_RS01345 PF01311 Bacterial export proteins, family 1 BAFPKO_RS01350 PF01313 Bacterial export proteins, family 3 BAFPKO_RS01355 PF00813 FliP family BAFPKO_RS01365 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BAFPKO_RS01370 PF02154 Flagellar motor switch protein FliM BAFPKO_RS01370 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BAFPKO_RS01375 PF03748 Flagellar basal body-associated protein FliL BAFPKO_RS01380 PF00691 OmpA family BAFPKO_RS01380 PF13677 Membrane MotB of proton-channel complex MotA/MotB BAFPKO_RS01385 PF01618 MotA/TolQ/ExbB proton channel family BAFPKO_RS01390 PF06289 Flagellar and Swarming motility proteins BAFPKO_RS01395 PF00460 Flagella basal body rod protein BAFPKO_RS01395 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BAFPKO_RS01395 PF07559 Flagellar basal body protein FlaE BAFPKO_RS01400 PF03963 Flagellar hook capping protein - N-terminal region BAFPKO_RS01420 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BAFPKO_RS01420 PF18269 T3SS EscN ATPase C-terminal domain BAFPKO_RS01420 PF02874 ATP synthase alpha/beta family, beta-barrel domain BAFPKO_RS01425 PF02108 Flagellar assembly protein FliH BAFPKO_RS01430 PF01706 FliG C-terminal domain BAFPKO_RS01430 PF14841 FliG middle domain BAFPKO_RS01430 PF14842 FliG N-terminal domain BAFPKO_RS01435 PF01514 Secretory protein of YscJ/FliF family BAFPKO_RS01435 PF08345 Flagellar M-ring protein C-terminal BAFPKO_RS01440 PF02049 Flagellar hook-basal body complex protein FliE BAFPKO_RS01445 PF00460 Flagella basal body rod protein BAFPKO_RS01445 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BAFPKO_RS01450 PF00460 Flagella basal body rod protein BAFPKO_RS01455 PF07724 AAA domain (Cdc48 subfamily) BAFPKO_RS01460 PF00227 Proteasome subunit BAFPKO_RS01465 PF02481 DNA recombination-mediator protein A BAFPKO_RS01470 PF00515 Tetratricopeptide repeat BAFPKO_RS01475 PF00091 Tubulin/FtsZ family, GTPase domain BAFPKO_RS01475 PF12327 FtsZ family, C-terminal domain BAFPKO_RS01480 PF02491 SHS2 domain inserted in FTSA BAFPKO_RS01485 PF08478 POTRA domain, FtsQ-type BAFPKO_RS01485 PF03799 Cell division protein FtsQ BAFPKO_RS01490 PF01098 Cell cycle protein BAFPKO_RS01495 PF00953 Glycosyl transferase family 4 BAFPKO_RS01500 PF01225 Mur ligase family, catalytic domain BAFPKO_RS01500 PF08245 Mur ligase middle domain BAFPKO_RS01500 PF02875 Mur ligase family, glutamate ligase domain BAFPKO_RS01510 PF01795 MraW methylase family BAFPKO_RS01530 PF01513 ATP-NAD kinase BAFPKO_RS01535 PF01584 CheW-like domain BAFPKO_RS01540 PF01728 FtsJ-like methyltransferase BAFPKO_RS01545 PF00348 Polyprenyl synthetase BAFPKO_RS01565 PF00005 ABC transporter BAFPKO_RS01610 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAFPKO_RS01615 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAFPKO_RS01620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAFPKO_RS01625 PF00528 Binding-protein-dependent transport system inner membrane component BAFPKO_RS01630 PF00528 Binding-protein-dependent transport system inner membrane component BAFPKO_RS01630 PF12911 N-terminal TM domain of oligopeptide transport permease C BAFPKO_RS01635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAFPKO_RS01635 PF00005 ABC transporter BAFPKO_RS01640 PF00005 ABC transporter BAFPKO_RS01640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BAFPKO_RS01650 PF00113 Enolase, C-terminal TIM barrel domain BAFPKO_RS01650 PF03952 Enolase, N-terminal domain BAFPKO_RS01655 PF00380 Ribosomal protein S9/S16 BAFPKO_RS01660 PF00572 Ribosomal protein L13 BAFPKO_RS01670 PF02934 GatB/GatE catalytic domain BAFPKO_RS01670 PF02637 GatB domain BAFPKO_RS01675 PF01425 Amidase BAFPKO_RS01685 PF13361 UvrD-like helicase C-terminal domain BAFPKO_RS01685 PF00580 UvrD/REP helicase N-terminal domain BAFPKO_RS01705 PF02887 Pyruvate kinase, alpha/beta domain BAFPKO_RS01705 PF00224 Pyruvate kinase, barrel domain BAFPKO_RS01715 PF00830 Ribosomal L28 family BAFPKO_RS01750 PF04452 RNA methyltransferase BAFPKO_RS01755 PF03572 Peptidase family S41 BAFPKO_RS01755 PF01471 Putative peptidoglycan binding domain BAFPKO_RS01755 PF17820 PDZ domain BAFPKO_RS01760 PF10609 NUBPL iron-transfer P-loop NTPase BAFPKO_RS01765 PF01790 Prolipoprotein diacylglyceryl transferase BAFPKO_RS01770 PF00563 EAL domain BAFPKO_RS01775 PF02142 MGS-like domain BAFPKO_RS01785 PF02127 Aminopeptidase I zinc metalloprotease (M18) BAFPKO_RS01790 PF00367 phosphotransferase system, EIIB BAFPKO_RS01795 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BAFPKO_RS01795 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BAFPKO_RS01800 PF00004 ATPase family associated with various cellular activities (AAA) BAFPKO_RS01800 PF07724 AAA domain (Cdc48 subfamily) BAFPKO_RS01800 PF17871 AAA lid domain BAFPKO_RS01800 PF10431 C-terminal, D2-small domain, of ClpB protein BAFPKO_RS01800 PF02861 Clp amino terminal domain, pathogenicity island component BAFPKO_RS01805 PF01479 S4 domain BAFPKO_RS01805 PF00579 tRNA synthetases class I (W and Y) BAFPKO_RS01810 PF03129 Anticodon binding domain BAFPKO_RS01810 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BAFPKO_RS01815 PF00749 tRNA synthetases class I (E and Q), catalytic domain BAFPKO_RS01830 PF01048 Phosphorylase superfamily BAFPKO_RS01835 PF02772 S-adenosylmethionine synthetase, central domain BAFPKO_RS01835 PF02773 S-adenosylmethionine synthetase, C-terminal domain BAFPKO_RS01835 PF00438 S-adenosylmethionine synthetase, N-terminal domain BAFPKO_RS01840 PF02664 S-Ribosylhomocysteinase (LuxS) BAFPKO_RS01850 PF01230 HIT domain BAFPKO_RS01855 PF00571 CBS domain BAFPKO_RS01855 PF01769 Divalent cation transporter BAFPKO_RS01855 PF03448 MgtE intracellular N domain BAFPKO_RS01860 PF01204 Trehalase BAFPKO_RS01865 PF02608 ABC transporter substrate-binding protein PnrA-like BAFPKO_RS01870 PF02608 ABC transporter substrate-binding protein PnrA-like BAFPKO_RS01875 PF02608 ABC transporter substrate-binding protein PnrA-like BAFPKO_RS01880 PF02608 ABC transporter substrate-binding protein PnrA-like BAFPKO_RS01885 PF02608 ABC transporter substrate-binding protein PnrA-like BAFPKO_RS01890 PF02608 ABC transporter substrate-binding protein PnrA-like BAFPKO_RS01895 PF00177 Ribosomal protein S7p/S5e BAFPKO_RS01900 PF00164 Ribosomal protein S12/S23 BAFPKO_RS01905 PF04983 RNA polymerase Rpb1, domain 3 BAFPKO_RS01905 PF00623 RNA polymerase Rpb1, domain 2 BAFPKO_RS01905 PF05000 RNA polymerase Rpb1, domain 4 BAFPKO_RS01905 PF04998 RNA polymerase Rpb1, domain 5 BAFPKO_RS01905 PF04997 RNA polymerase Rpb1, domain 1 BAFPKO_RS01910 PF04560 RNA polymerase Rpb2, domain 7 BAFPKO_RS01910 PF04563 RNA polymerase beta subunit BAFPKO_RS01910 PF04561 RNA polymerase Rpb2, domain 2 BAFPKO_RS01910 PF04565 RNA polymerase Rpb2, domain 3 BAFPKO_RS01910 PF10385 RNA polymerase beta subunit external 1 domain BAFPKO_RS01910 PF00562 RNA polymerase Rpb2, domain 6 BAFPKO_RS01915 PF00542 Ribosomal protein L7/L12 C-terminal domain BAFPKO_RS01915 PF16320 Ribosomal protein L7/L12 dimerisation domain BAFPKO_RS01920 PF00466 Ribosomal protein L10 BAFPKO_RS01925 PF00687 Ribosomal protein L1p/L10e family BAFPKO_RS01930 PF00298 Ribosomal protein L11, RNA binding domain BAFPKO_RS01930 PF03946 Ribosomal protein L11, N-terminal domain BAFPKO_RS01935 PF02357 Transcription termination factor nusG BAFPKO_RS01940 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BAFPKO_RS01950 PF00471 Ribosomal protein L33 BAFPKO_RS01970 PF12796 Ankyrin repeats (3 copies) BAFPKO_RS01985 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BAFPKO_RS01985 PF09180 Prolyl-tRNA synthetase, C-terminal BAFPKO_RS01985 PF03129 Anticodon binding domain BAFPKO_RS02010 PF01238 Phosphomannose isomerase type I BAFPKO_RS02040 PF01739 CheR methyltransferase, SAM binding domain BAFPKO_RS02040 PF03705 CheR methyltransferase, all-alpha domain BAFPKO_RS02045 PF00072 Response regulator receiver domain BAFPKO_RS02045 PF01339 CheB methylesterase BAFPKO_RS02055 PF05191 Adenylate kinase, active site lid BAFPKO_RS02065 PF00072 Response regulator receiver domain BAFPKO_RS02070 PF01627 Hpt domain BAFPKO_RS02070 PF00072 Response regulator receiver domain BAFPKO_RS02070 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BAFPKO_RS02070 PF00512 His Kinase A (phospho-acceptor) domain BAFPKO_RS02070 PF00672 HAMP domain BAFPKO_RS02070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAFPKO_RS02100 PF02245 Methylpurine-DNA glycosylase (MPG) BAFPKO_RS02130 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BAFPKO_RS02145 PF09186 Domain of unknown function (DUF1949) BAFPKO_RS02145 PF01205 Uncharacterized protein family UPF0029 BAFPKO_RS02150 PF13614 AAA domain BAFPKO_RS02160 PF17762 HTH domain found in ParB protein BAFPKO_RS02160 PF02195 ParB-like nuclease domain BAFPKO_RS02165 PF00521 DNA gyrase/topoisomerase IV, subunit A BAFPKO_RS02165 PF03989 DNA gyrase C-terminal domain, beta-propeller BAFPKO_RS02170 PF01751 Toprim domain BAFPKO_RS02170 PF00204 DNA gyrase B BAFPKO_RS02170 PF00986 DNA gyrase B subunit, carboxyl terminus BAFPKO_RS02170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAFPKO_RS02175 PF11638 DnaA N-terminal domain BAFPKO_RS02175 PF00308 Bacterial dnaA protein BAFPKO_RS02175 PF08299 Bacterial dnaA protein helix-turn-helix BAFPKO_RS02180 PF02767 DNA polymerase III beta subunit, central domain BAFPKO_RS02180 PF00712 DNA polymerase III beta subunit, N-terminal domain BAFPKO_RS02180 PF02768 DNA polymerase III beta subunit, C-terminal domain BAFPKO_RS02190 PF00468 Ribosomal protein L34 BAFPKO_RS02195 PF00825 Ribonuclease P BAFPKO_RS02200 PF02096 60Kd inner membrane protein BAFPKO_RS02210 PF01370 NAD dependent epimerase/dehydratase family BAFPKO_RS02215 PF01116 Fructose-bisphosphate aldolase class-II BAFPKO_RS02220 PF01336 OB-fold nucleic acid binding domain BAFPKO_RS02220 PF00152 tRNA synthetases class II (D, K and N) BAFPKO_RS02220 PF02938 GAD domain BAFPKO_RS02225 PF00999 Sodium/hydrogen exchanger family BAFPKO_RS02240 PF00309 Sigma-54 factor, Activator interacting domain (AID) BAFPKO_RS02240 PF04963 Sigma-54 factor, core binding domain BAFPKO_RS02240 PF04552 Sigma-54, DNA binding domain BAFPKO_RS02245 PF02417 Chromate transporter BAFPKO_RS02255 PF00924 Mechanosensitive ion channel BAFPKO_RS02255 PF05552 Conserved TM helix BAFPKO_RS02260 PF00534 Glycosyl transferases group 1 BAFPKO_RS02260 PF13439 Glycosyltransferase Family 4 BAFPKO_RS02275 PF01541 GIY-YIG catalytic domain BAFPKO_RS02275 PF08459 UvrC Helix-hairpin-helix N-terminal BAFPKO_RS02320 PF12169 DNA polymerase III subunits gamma and tau domain III BAFPKO_RS02325 PF02575 YbaB/EbfC DNA-binding family BAFPKO_RS02330 PF00334 Nucleoside diphosphate kinase BAFPKO_RS02345 PF12399 Branched-chain amino acid ATP-binding cassette transporter BAFPKO_RS02345 PF00005 ABC transporter BAFPKO_RS02350 PF02578 Multi-copper polyphenol oxidoreductase laccase BAFPKO_RS02355 PF01784 NIF3 (NGG1p interacting factor 3) BAFPKO_RS02360 PF01252 Signal peptidase (SPase) II BAFPKO_RS02375 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BAFPKO_RS02380 PF01554 MatE BAFPKO_RS02390 PF00009 Elongation factor Tu GTP binding domain BAFPKO_RS02390 PF03143 Elongation factor Tu C-terminal domain BAFPKO_RS02390 PF03144 Elongation factor Tu domain 2 BAFPKO_RS02395 PF00338 Ribosomal protein S10p/S20e BAFPKO_RS02400 PF00297 Ribosomal protein L3 BAFPKO_RS02405 PF00573 Ribosomal protein L4/L1 family BAFPKO_RS02410 PF00276 Ribosomal protein L23 BAFPKO_RS02415 PF03947 Ribosomal Proteins L2, C-terminal domain BAFPKO_RS02415 PF00181 Ribosomal Proteins L2, RNA binding domain BAFPKO_RS02420 PF00203 Ribosomal protein S19 BAFPKO_RS02425 PF00237 Ribosomal protein L22p/L17e BAFPKO_RS02430 PF00189 Ribosomal protein S3, C-terminal domain BAFPKO_RS02430 PF07650 KH domain BAFPKO_RS02435 PF00252 Ribosomal protein L16p/L10e BAFPKO_RS02440 PF00831 Ribosomal L29 protein BAFPKO_RS02445 PF00366 Ribosomal protein S17 BAFPKO_RS02450 PF00238 Ribosomal protein L14p/L23e BAFPKO_RS02455 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BAFPKO_RS02455 PF00467 KOW motif BAFPKO_RS02460 PF00673 ribosomal L5P family C-terminus BAFPKO_RS02460 PF00281 Ribosomal protein L5 BAFPKO_RS02465 PF00410 Ribosomal protein S8 BAFPKO_RS02470 PF00347 Ribosomal protein L6 BAFPKO_RS02475 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BAFPKO_RS02480 PF00333 Ribosomal protein S5, N-terminal domain BAFPKO_RS02480 PF03719 Ribosomal protein S5, C-terminal domain BAFPKO_RS02485 PF00327 Ribosomal protein L30p/L7e BAFPKO_RS02490 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BAFPKO_RS02495 PF00344 SecY translocase BAFPKO_RS02500 PF00444 Ribosomal protein L36 BAFPKO_RS02505 PF00416 Ribosomal protein S13/S18 BAFPKO_RS02510 PF00411 Ribosomal protein S11 BAFPKO_RS02515 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BAFPKO_RS02515 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BAFPKO_RS02515 PF01000 RNA polymerase Rpb3/RpoA insert domain BAFPKO_RS02520 PF01196 Ribosomal protein L17 BAFPKO_RS02525 PF00013 KH domain BAFPKO_RS02525 PF12072 Domain of unknown function (DUF3552) BAFPKO_RS02525 PF01966 HD domain BAFPKO_RS02530 PF13277 YmdB-like protein BAFPKO_RS02535 PF01479 S4 domain BAFPKO_RS02535 PF01728 FtsJ-like methyltransferase BAFPKO_RS02545 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BAFPKO_RS02545 PF01926 50S ribosome-binding GTPase BAFPKO_RS02555 PF13419 Haloacid dehalogenase-like hydrolase BAFPKO_RS02565 PF01409 tRNA synthetases class II core domain (F) BAFPKO_RS02570 PF03484 tRNA synthetase B5 domain BAFPKO_RS02570 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BAFPKO_RS02570 PF18262 Phe-tRNA synthetase beta subunit B1 domain BAFPKO_RS02575 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAFPKO_RS02580 PF08032 RNA 2'-O ribose methyltransferase substrate binding BAFPKO_RS02580 PF00588 SpoU rRNA Methylase family BAFPKO_RS02585 PF01556 DnaJ C terminal domain BAFPKO_RS02585 PF00684 DnaJ central domain BAFPKO_RS02585 PF00226 DnaJ domain BAFPKO_RS02590 PF00012 Hsp70 protein BAFPKO_RS02595 PF01025 GrpE BAFPKO_RS02600 PF00795 Carbon-nitrogen hydrolase BAFPKO_RS02600 PF02540 NAD synthase BAFPKO_RS02625 PF03309 Type III pantothenate kinase BAFPKO_RS02630 PF00248 Aldo/keto reductase family BAFPKO_RS02640 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BAFPKO_RS02650 PF03099 Biotin/lipoate A/B protein ligase family BAFPKO_RS02650 PF12706 Beta-lactamase superfamily domain BAFPKO_RS02655 PF03372 Endonuclease/Exonuclease/phosphatase family BAFPKO_RS02665 PF05193 Peptidase M16 inactive domain BAFPKO_RS02665 PF00675 Insulinase (Peptidase family M16) BAFPKO_RS02690 PF01027 Inhibitor of apoptosis-promoting Bax1 BAFPKO_RS02695 PF14492 Elongation Factor G, domain II BAFPKO_RS02695 PF03764 Elongation factor G, domain IV BAFPKO_RS02695 PF03144 Elongation factor Tu domain 2 BAFPKO_RS02695 PF00009 Elongation factor Tu GTP binding domain BAFPKO_RS02695 PF00679 Elongation factor G C-terminus BAFPKO_RS02715 PF14572 Phosphoribosyl synthetase-associated domain BAFPKO_RS02715 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BAFPKO_RS02730 PF01121 Dephospho-CoA kinase BAFPKO_RS02735 PF01367 5'-3' exonuclease, C-terminal SAM fold BAFPKO_RS02735 PF01612 3'-5' exonuclease BAFPKO_RS02735 PF00476 DNA polymerase family A BAFPKO_RS02735 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BAFPKO_RS02750 PF00072 Response regulator receiver domain BAFPKO_RS02755 PF03120 NAD-dependent DNA ligase OB-fold domain BAFPKO_RS02755 PF00533 BRCA1 C Terminus (BRCT) domain BAFPKO_RS02755 PF01653 NAD-dependent DNA ligase adenylation domain BAFPKO_RS02780 PF00381 PTS HPr component phosphorylation site BAFPKO_RS02785 PF05524 PEP-utilising enzyme, N-terminal BAFPKO_RS02785 PF00391 PEP-utilising enzyme, mobile domain BAFPKO_RS02785 PF02896 PEP-utilising enzyme, TIM barrel domain BAFPKO_RS02790 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BAFPKO_RS02795 PF00183 Hsp90 protein BAFPKO_RS02800 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BAFPKO_RS02800 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BAFPKO_RS02820 PF01584 CheW-like domain BAFPKO_RS02830 PF01584 CheW-like domain BAFPKO_RS02830 PF07194 P2 response regulator binding domain BAFPKO_RS02830 PF01627 Hpt domain BAFPKO_RS02830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAFPKO_RS02830 PF02895 Signal transducing histidine kinase, homodimeric domain BAFPKO_RS02835 PF01339 CheB methylesterase BAFPKO_RS02845 PF00072 Response regulator receiver domain BAFPKO_RS02845 PF00486 Transcriptional regulatory protein, C terminal BAFPKO_RS02855 PF00696 Amino acid kinase family BAFPKO_RS02860 PF00535 Glycosyl transferase family 2 BAFPKO_RS02865 PF00005 ABC transporter BAFPKO_RS02875 PF06418 CTP synthase N-terminus BAFPKO_RS02875 PF00117 Glutamine amidotransferase class-I BAFPKO_RS02890 PF12729 Four helix bundle sensory module for signal transduction BAFPKO_RS02890 PF00672 HAMP domain BAFPKO_RS02890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAFPKO_RS02895 PF01336 OB-fold nucleic acid binding domain BAFPKO_RS02895 PF14579 Helix-hairpin-helix motif BAFPKO_RS02895 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BAFPKO_RS02895 PF07733 Bacterial DNA polymerase III alpha NTPase domain BAFPKO_RS02895 PF02811 PHP domain BAFPKO_RS02905 PF00270 DEAD/DEAH box helicase BAFPKO_RS02905 PF00271 Helicase conserved C-terminal domain BAFPKO_RS02905 PF17191 RecG wedge domain BAFPKO_RS02915 PF01554 MatE BAFPKO_RS02925 PF08245 Mur ligase middle domain BAFPKO_RS02930 PF02388 FemAB family BAFPKO_RS02935 PF01588 Putative tRNA binding domain BAFPKO_RS02935 PF09334 tRNA synthetases class I (M) BAFPKO_RS02935 PF08264 Anticodon-binding domain of tRNA BAFPKO_RS02940 PF01048 Phosphorylase superfamily BAFPKO_RS02945 PF01515 Phosphate acetyl/butaryl transferase BAFPKO_RS02950 PF00398 Ribosomal RNA adenine dimethylase BAFPKO_RS02965 PF00501 AMP-binding enzyme BAFPKO_RS02970 PF05746 DALR anticodon binding domain BAFPKO_RS02970 PF03485 Arginyl tRNA synthetase N terminal domain BAFPKO_RS02970 PF00750 tRNA synthetases class I (R) BAFPKO_RS02980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAFPKO_RS02980 PF00672 HAMP domain BAFPKO_RS02980 PF02743 Cache domain BAFPKO_RS02985 PF05227 CHASE3 domain BAFPKO_RS02985 PF00672 HAMP domain BAFPKO_RS02985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAFPKO_RS02990 PF01565 FAD binding domain BAFPKO_RS02990 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BAFPKO_RS02995 PF01406 tRNA synthetases class I (C) catalytic domain BAFPKO_RS03005 PF00464 Serine hydroxymethyltransferase BAFPKO_RS03010 PF00226 DnaJ domain BAFPKO_RS03010 PF01556 DnaJ C terminal domain BAFPKO_RS03010 PF00684 DnaJ central domain BAFPKO_RS03020 PF02652 L-lactate permease BAFPKO_RS03025 PF00768 D-alanyl-D-alanine carboxypeptidase BAFPKO_RS03025 PF07943 Penicillin-binding protein 5, C-terminal domain BAFPKO_RS03030 PF03975 CheD chemotactic sensory transduction BAFPKO_RS03035 PF00580 UvrD/REP helicase N-terminal domain BAFPKO_RS03035 PF13361 UvrD-like helicase C-terminal domain BAFPKO_RS03040 PF01546 Peptidase family M20/M25/M40 BAFPKO_RS03040 PF07687 Peptidase dimerisation domain BAFPKO_RS03065 PF05698 Bacterial trigger factor protein (TF) C-terminus BAFPKO_RS03065 PF05697 Bacterial trigger factor protein (TF) BAFPKO_RS03070 PF00574 Clp protease BAFPKO_RS03075 PF07724 AAA domain (Cdc48 subfamily) BAFPKO_RS03075 PF06689 ClpX C4-type zinc finger BAFPKO_RS03075 PF10431 C-terminal, D2-small domain, of ClpB protein BAFPKO_RS03080 PF05362 Lon protease (S16) C-terminal proteolytic domain BAFPKO_RS03080 PF02190 ATP-dependent protease La (LON) substrate-binding domain BAFPKO_RS03080 PF00004 ATPase family associated with various cellular activities (AAA) BAFPKO_RS03085 PF01479 S4 domain BAFPKO_RS03085 PF00163 Ribosomal protein S4/S9 N-terminal domain BAFPKO_RS03105 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BAFPKO_RS03115 PF00933 Glycosyl hydrolase family 3 N terminal domain BAFPKO_RS03130 PF00871 Acetokinase family BAFPKO_RS03135 PF00271 Helicase conserved C-terminal domain BAFPKO_RS03135 PF02559 CarD-like/TRCF domain BAFPKO_RS03135 PF03461 TRCF domain BAFPKO_RS03135 PF17757 UvrB interaction domain BAFPKO_RS03135 PF00270 DEAD/DEAH box helicase BAFPKO_RS03145 PF08239 Bacterial SH3 domain BAFPKO_RS03145 PF01520 N-acetylmuramoyl-L-alanine amidase BAFPKO_RS03160 PF02127 Aminopeptidase I zinc metalloprotease (M18) BAFPKO_RS03170 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BAFPKO_RS03170 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BAFPKO_RS03175 PF00294 pfkB family carbohydrate kinase BAFPKO_RS03190 PF13538 UvrD-like helicase C-terminal domain BAFPKO_RS03195 PF13361 UvrD-like helicase C-terminal domain BAFPKO_RS03195 PF00580 UvrD/REP helicase N-terminal domain BAFPKO_RS03195 PF12705 PD-(D/E)XK nuclease superfamily BAFPKO_RS03205 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BAFPKO_RS03205 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BAFPKO_RS03205 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain BAFPKO_RS03210 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BAFPKO_RS03210 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BAFPKO_RS03230 PF00528 Binding-protein-dependent transport system inner membrane component BAFPKO_RS03235 PF00528 Binding-protein-dependent transport system inner membrane component BAFPKO_RS03240 PF08402 TOBE domain BAFPKO_RS03240 PF00005 ABC transporter BAFPKO_RS03245 PF01926 50S ribosome-binding GTPase BAFPKO_RS03250 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase BAFPKO_RS03255 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BAFPKO_RS03255 PF02378 Phosphotransferase system, EIIC BAFPKO_RS03255 PF00367 phosphotransferase system, EIIB BAFPKO_RS03275 PF00118 TCP-1/cpn60 chaperonin family BAFPKO_RS03285 PF02699 Preprotein translocase subunit BAFPKO_RS03290 PF02355 Protein export membrane protein BAFPKO_RS03295 PF02355 Protein export membrane protein BAFPKO_RS03305 PF00226 DnaJ domain BAFPKO_RS03305 PF01556 DnaJ C terminal domain BAFPKO_RS03315 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BAFPKO_RS03320 PF00300 Histidine phosphatase superfamily (branch 1) BAFPKO_RS03325 PF01921 tRNA synthetases class I (K) BAFPKO_RS03330 PF07650 KH domain BAFPKO_RS03330 PF01926 50S ribosome-binding GTPase BAFPKO_RS03360 PF01520 N-acetylmuramoyl-L-alanine amidase BAFPKO_RS03370 PF04620 Flagellar filament outer layer protein Flaa BAFPKO_RS03375 PF01627 Hpt domain BAFPKO_RS03375 PF07194 P2 response regulator binding domain BAFPKO_RS03375 PF01584 CheW-like domain BAFPKO_RS03375 PF02895 Signal transducing histidine kinase, homodimeric domain BAFPKO_RS03375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAFPKO_RS03380 PF01584 CheW-like domain BAFPKO_RS03390 PF00072 Response regulator receiver domain BAFPKO_RS03410 PF13419 Haloacid dehalogenase-like hydrolase BAFPKO_RS03415 PF00005 ABC transporter BAFPKO_RS03420 PF02653 Branched-chain amino acid transport system / permease component BAFPKO_RS03425 PF02653 Branched-chain amino acid transport system / permease component BAFPKO_RS03430 PF02203 Tar ligand binding domain homologue BAFPKO_RS03430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAFPKO_RS03430 PF00672 HAMP domain BAFPKO_RS03435 PF00672 HAMP domain BAFPKO_RS03435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BAFPKO_RS03435 PF02203 Tar ligand binding domain homologue BAFPKO_RS03445 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal BAFPKO_RS03445 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal BAFPKO_RS03450 PF01070 FMN-dependent dehydrogenase BAFPKO_RS03455 PF00368 Hydroxymethylglutaryl-coenzyme A reductase BAFPKO_RS03480 PF00188 Cysteine-rich secretory protein family BAFPKO_RS03485 PF00210 Ferritin-like domain BAFPKO_RS03490 PF03144 Elongation factor Tu domain 2 BAFPKO_RS03490 PF00009 Elongation factor Tu GTP binding domain BAFPKO_RS03490 PF00679 Elongation factor G C-terminus BAFPKO_RS03490 PF14492 Elongation Factor G, domain II BAFPKO_RS03490 PF03764 Elongation factor G, domain IV BAFPKO_RS03500 PF02881 SRP54-type protein, helical bundle domain BAFPKO_RS03500 PF00448 SRP54-type protein, GTPase domain BAFPKO_RS03500 PF02978 Signal peptide binding domain BAFPKO_RS03505 PF00886 Ribosomal protein S16 BAFPKO_RS03515 PF01782 RimM N-terminal domain BAFPKO_RS03515 PF05239 PRC-barrel domain BAFPKO_RS03520 PF01746 tRNA (Guanine-1)-methyltransferase BAFPKO_RS03525 PF01245 Ribosomal protein L19 BAFPKO_RS03535 PF01467 Cytidylyltransferase-like BAFPKO_RS03540 PF01783 Ribosomal L32p protein family BAFPKO_RS03545 PF00550 Phosphopantetheine attachment site BAFPKO_RS03550 PF14622 Ribonuclease-III-like BAFPKO_RS03550 PF00035 Double-stranded RNA binding motif BAFPKO_RS03555 PF13735 tRNA nucleotidyltransferase domain 2 putative BAFPKO_RS03555 PF01743 Poly A polymerase head domain BAFPKO_RS03555 PF12627 Probable RNA and SrmB- binding site of polymerase A BAFPKO_RS03580 PF02618 YceG-like family BAFPKO_RS03585 PF01807 CHC2 zinc finger BAFPKO_RS03585 PF08275 DNA primase catalytic core, N-terminal domain BAFPKO_RS03585 PF13662 Toprim domain BAFPKO_RS03585 PF10410 DnaB-helicase binding domain of primase BAFPKO_RS03590 PF03979 Sigma-70 factor, region 1.1 BAFPKO_RS03590 PF04545 Sigma-70, region 4 BAFPKO_RS03590 PF00140 Sigma-70 factor, region 1.2 BAFPKO_RS03590 PF04539 Sigma-70 region 3 BAFPKO_RS03590 PF04542 Sigma-70 region 2 BAFPKO_RS03620 PF03717 Penicillin-binding Protein dimerisation domain BAFPKO_RS03620 PF03793 PASTA domain BAFPKO_RS03620 PF00905 Penicillin binding protein transpeptidase domain BAFPKO_RS03625 PF01098 Cell cycle protein BAFPKO_RS03630 PF03129 Anticodon binding domain BAFPKO_RS03630 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BAFPKO_RS03630 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BAFPKO_RS03635 PF01066 CDP-alcohol phosphatidyltransferase BAFPKO_RS03650 PF02386 Cation transport protein BAFPKO_RS03660 PF17886 HSP20-like domain found in ArsA BAFPKO_RS03660 PF02374 Anion-transporting ATPase BAFPKO_RS03665 PF00365 Phosphofructokinase BAFPKO_RS03670 PF07992 Pyridine nucleotide-disulphide oxidoreductase BAFPKO_RS03670 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BAFPKO_RS03675 PF00375 Sodium:dicarboxylate symporter family BAFPKO_RS03680 PF00342 Phosphoglucose isomerase BAFPKO_RS03685 PF02195 ParB-like nuclease domain BAFPKO_RS03685 PF17762 HTH domain found in ParB protein BAFPKO_RS03690 PF00905 Penicillin binding protein transpeptidase domain BAFPKO_RS03690 PF00912 Transglycosylase BAFPKO_RS03690 PF17092 Penicillin-binding protein OB-like domain BAFPKO_RS03700 PF01300 Telomere recombination BAFPKO_RS03700 PF03481 Putative GTP-binding controlling metal-binding BAFPKO_RS03705 PF05036 Sporulation related domain BAFPKO_RS03705 PF03330 Lytic transglycolase BAFPKO_RS03710 PF01207 Dihydrouridine synthase (Dus) BAFPKO_RS03715 PF08264 Anticodon-binding domain of tRNA BAFPKO_RS03715 PF00133 tRNA synthetases class I (I, L, M and V) BAFPKO_RS03715 PF10458 Valyl tRNA synthetase tRNA binding arm BAFPKO_RS03725 PF01266 FAD dependent oxidoreductase BAFPKO_RS03725 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BAFPKO_RS03730 PF00166 Chaperonin 10 Kd subunit BAFPKO_RS03735 PF00005 ABC transporter BAFPKO_RS03735 PF12848 ABC transporter BAFPKO_RS03760 PF00633 Helix-hairpin-helix motif BAFPKO_RS03760 PF00730 HhH-GPD superfamily base excision DNA repair protein BAFPKO_RS03765 PF12911 N-terminal TM domain of oligopeptide transport permease C BAFPKO_RS03765 PF00528 Binding-protein-dependent transport system inner membrane component BAFPKO_RS03770 PF00528 Binding-protein-dependent transport system inner membrane component BAFPKO_RS03790 PF09822 ABC-type uncharacterized transport system BAFPKO_RS03800 PF00005 ABC transporter BAFPKO_RS03805 PF00753 Metallo-beta-lactamase superfamily BAFPKO_RS03805 PF12706 Beta-lactamase superfamily domain BAFPKO_RS03810 PF01266 FAD dependent oxidoreductase BAFPKO_RS03815 PF00574 Clp protease BAFPKO_RS03840 PF01551 Peptidase family M23 BAFPKO_RS03845 PF02954 Bacterial regulatory protein, Fis family BAFPKO_RS03845 PF00072 Response regulator receiver domain BAFPKO_RS03845 PF00158 Sigma-54 interaction domain BAFPKO_RS03850 PF13426 PAS domain BAFPKO_RS03850 PF13188 PAS domain BAFPKO_RS03850 PF00989 PAS fold BAFPKO_RS03850 PF00512 His Kinase A (phospho-acceptor) domain BAFPKO_RS03850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BAFPKO_RS03855 PF09115 DNA polymerase III, delta subunit, C terminal BAFPKO_RS03865 PF04101 Glycosyltransferase family 28 C-terminal domain BAFPKO_RS03865 PF03033 Glycosyltransferase family 28 N-terminal domain BAFPKO_RS03875 PF00814 Glycoprotease family BAFPKO_RS03885 PF04539 Sigma-70 region 3 BAFPKO_RS03885 PF04542 Sigma-70 region 2 BAFPKO_RS03885 PF04545 Sigma-70, region 4 BAFPKO_RS03885 PF03979 Sigma-70 factor, region 1.1 BAFPKO_RS03885 PF00140 Sigma-70 factor, region 1.2 BAFPKO_RS03895 PF02119 Flagellar P-ring protein BAFPKO_RS03905 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BAFPKO_RS03905 PF00460 Flagella basal body rod protein BAFPKO_RS03910 PF00460 Flagella basal body rod protein BAFPKO_RS03910 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BAFPKO_RS03920 PF00156 Phosphoribosyl transferase domain BAFPKO_RS03925 PF00829 Ribosomal prokaryotic L21 protein BAFPKO_RS03935 PF01016 Ribosomal L27 protein BAFPKO_RS03940 PF01018 GTP1/OBG BAFPKO_RS03940 PF01926 50S ribosome-binding GTPase BAFPKO_RS03945 PF01467 Cytidylyltransferase-like BAFPKO_RS03960 PF04026 SpoVG BAFPKO_RS03970 PF14693 Ribosomal protein TL5, C-terminal domain BAFPKO_RS03970 PF01386 Ribosomal L25p family BAFPKO_RS03975 PF01195 Peptidyl-tRNA hydrolase BAFPKO_RS03980 PF01171 PP-loop family BAFPKO_RS03985 PF17862 AAA+ lid domain BAFPKO_RS03985 PF06480 FtsH Extracellular BAFPKO_RS03985 PF00004 ATPase family associated with various cellular activities (AAA) BAFPKO_RS03985 PF01434 Peptidase family M41 BAFPKO_RS04005 PF02223 Thymidylate kinase BAFPKO_RS04015 PF07244 Surface antigen variable number repeat BAFPKO_RS04015 PF01103 Surface antigen BAFPKO_RS04025 PF01624 MutS domain I BAFPKO_RS04025 PF05188 MutS domain II BAFPKO_RS04025 PF05190 MutS family domain IV BAFPKO_RS04025 PF00488 MutS domain V BAFPKO_RS04025 PF05192 MutS domain III BAFPKO_RS04030 PF00156 Phosphoribosyl transferase domain BAFPKO_RS04035 PF02576 RimP N-terminal domain BAFPKO_RS04040 PF00575 S1 RNA binding domain BAFPKO_RS04040 PF13184 NusA-like KH domain BAFPKO_RS04040 PF08529 NusA N-terminal domain BAFPKO_RS04045 PF04760 Translation initiation factor IF-2, N-terminal region BAFPKO_RS04045 PF11987 Translation-initiation factor 2 BAFPKO_RS04045 PF00009 Elongation factor Tu GTP binding domain BAFPKO_RS04050 PF02033 Ribosome-binding factor A BAFPKO_RS04055 PF01509 TruB family pseudouridylate synthase (N terminal domain) BAFPKO_RS04060 PF00312 Ribosomal protein S15 BAFPKO_RS04065 PF03725 3' exoribonuclease family, domain 2 BAFPKO_RS04065 PF01138 3' exoribonuclease family, domain 1 BAFPKO_RS04065 PF00013 KH domain BAFPKO_RS04065 PF00575 S1 RNA binding domain BAFPKO_RS04065 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BAFPKO_RS04085 PF01702 Queuine tRNA-ribosyltransferase BAFPKO_RS04090 PF03023 Lipid II flippase MurJ BAFPKO_RS04100 PF02441 Flavoprotein BAFPKO_RS04100 PF04127 DNA / pantothenate metabolism flavoprotein BAFPKO_RS04105 PF00474 Sodium:solute symporter family BAFPKO_RS04110 PF00849 RNA pseudouridylate synthase BAFPKO_RS04120 PF01225 Mur ligase family, catalytic domain BAFPKO_RS04120 PF02875 Mur ligase family, glutamate ligase domain BAFPKO_RS04120 PF08245 Mur ligase middle domain BAFPKO_RS04125 PF03755 YicC-like family, N-terminal region BAFPKO_RS04125 PF08340 Domain of unknown function (DUF1732) BAFPKO_RS04165 PF00270 DEAD/DEAH box helicase BAFPKO_RS04165 PF04408 Helicase associated domain (HA2) BAFPKO_RS04165 PF00271 Helicase conserved C-terminal domain BAFPKO_RS04165 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BAFPKO_RS04170 PF13368 Topoisomerase C-terminal repeat BAFPKO_RS04170 PF01751 Toprim domain BAFPKO_RS04170 PF01131 DNA topoisomerase BAFPKO_RS04175 PF00149 Calcineurin-like phosphoesterase BAFPKO_RS04180 PF13476 AAA domain BAFPKO_RS04185 PF00480 ROK family BAFPKO_RS04195 PF08264 Anticodon-binding domain of tRNA BAFPKO_RS04195 PF00133 tRNA synthetases class I (I, L, M and V) BAFPKO_RS04200 PF07724 AAA domain (Cdc48 subfamily) BAFPKO_RS04200 PF02861 Clp amino terminal domain, pathogenicity island component BAFPKO_RS04200 PF00004 ATPase family associated with various cellular activities (AAA) BAFPKO_RS04200 PF10431 C-terminal, D2-small domain, of ClpB protein BAFPKO_RS04200 PF17871 AAA lid domain BAFPKO_RS04205 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BAFPKO_RS04205 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BAFPKO_RS04205 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BAFPKO_RS04205 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BAFPKO_RS04210 PF02151 UvrB/uvrC motif BAFPKO_RS04210 PF12344 Ultra-violet resistance protein B BAFPKO_RS04210 PF17757 UvrB interaction domain BAFPKO_RS04210 PF00271 Helicase conserved C-terminal domain BAFPKO_RS04210 PF04851 Type III restriction enzyme, res subunit BAFPKO_RS04215 PF17755 UvrA DNA-binding domain BAFPKO_RS04215 PF17760 UvrA interaction domain BAFPKO_RS04215 PF00005 ABC transporter BAFPKO_RS04255 PF00708 Acylphosphatase BAFPKO_RS04265 PF16684 Telomere resolvase BAFPKO_RS04270 PF02378 Phosphotransferase system, EIIC BAFPKO_RS04275 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BAFPKO_RS04280 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BAFPKO_RS04310 PF13614 AAA domain BAFPKO_RS04325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAFPKO_RS04330 PF00478 IMP dehydrogenase / GMP reductase domain BAFPKO_RS04335 PF00958 GMP synthase C terminal domain BAFPKO_RS04335 PF00117 Glutamine amidotransferase class-I BAFPKO_RS04335 PF02540 NAD synthase BAFPKO_RS04340 PF01441 Lipoprotein BAFPKO_RS04345 PF00860 Permease family BAFPKO_RS04350 PF00860 Permease family BAFPKO_RS04375 PF12796 Ankyrin repeats (3 copies) BAFPKO_RS04380 PF02378 Phosphotransferase system, EIIC BAFPKO_RS04380 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BAFPKO_RS04380 PF00367 phosphotransferase system, EIIB BAFPKO_RS04520 PF03304 Mlp lipoprotein family BAFPKO_RS04535 PF13614 AAA domain BAFPKO_RS04730 PF03304 Mlp lipoprotein family BAFPKO_RS04745 PF13614 AAA domain BAFPKO_RS04785 PF05154 TM2 domain BAFPKO_RS04935 PF03304 Mlp lipoprotein family BAFPKO_RS04955 PF13614 AAA domain BAFPKO_RS04955 PF18607 ParA helix turn helix domain BAFPKO_RS04990 PF05154 TM2 domain BAFPKO_RS05140 PF03304 Mlp lipoprotein family BAFPKO_RS05145 PF03304 Mlp lipoprotein family BAFPKO_RS05165 PF13614 AAA domain BAFPKO_RS05350 PF03304 Mlp lipoprotein family BAFPKO_RS05370 PF13614 AAA domain BAFPKO_RS05520 PF03304 Mlp lipoprotein family BAFPKO_RS05525 PF03304 Mlp lipoprotein family BAFPKO_RS05545 PF13614 AAA domain BAFPKO_RS05730 PF13614 AAA domain BAFPKO_RS05820 PF13614 AAA domain BAFPKO_RS05860 PF17472 Family of unknown function (DUF5425) BAFPKO_RS05930 PF13614 AAA domain BAFPKO_RS05970 PF00857 Isochorismatase family BAFPKO_RS05990 PF17044 Borrelial persistence in ticks protein A BAFPKO_RS06025 PF03796 DnaB-like helicase C terminal domain BAFPKO_RS06025 PF00772 DnaB-like helicase N terminal domain BAFPKO_RS06100 PF13614 AAA domain BAFPKO_RS06230 PF13614 AAA domain BAFPKO_RS06325 PF03796 DnaB-like helicase C terminal domain BAFPKO_RS06325 PF00772 DnaB-like helicase N terminal domain BAFPKO_RS06390 PF00005 ABC transporter BAFPKO_RS06430 PF00921 Borrelia lipoprotein BAFPKO_RS06635 PF01979 Amidohydrolase family BAFPKO_RS06635 PF13382 Adenine deaminase C-terminal domain BAFPKO_RS06650 PF01048 Phosphorylase superfamily BAFPKO_RS06700 PF13614 AAA domain BAFPKO_RS06840 PF00820 Borrelia lipoprotein BAFPKO_RS06845 PF00820 Borrelia lipoprotein BAFPKO_RS06860 PF13614 AAA domain BAFPKO_RS06875 PF02352 Decorin binding protein BAFPKO_RS06880 PF02352 Decorin binding protein BAFPKO_RS06915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BAFPKO_RS06920 PF03304 Mlp lipoprotein family BAFPKO_RS07105 PF02511 Thymidylate synthase complementing protein BAFPKO_RS07120 PF03304 Mlp lipoprotein family BAFPKO_RS07175 PF02378 Phosphotransferase system, EIIC BAFPKO_RS07175 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BAFPKO_RS07175 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BAFPKO_RS07185 PF00253 Ribosomal protein S14p/S29e BAFPKO_RS07190 PF01751 Toprim domain BAFPKO_RS07190 PF13331 Domain of unknown function (DUF4093) BAFPKO_RS07280 PF00772 DnaB-like helicase N terminal domain BAFPKO_RS07280 PF03796 DnaB-like helicase C terminal domain