locus-tag class description P613_RS00005 PF00933 Glycosyl hydrolase family 3 N terminal domain P613_RS00015 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I P613_RS00015 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain P613_RS00015 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III P613_RS00015 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II P613_RS00020 PF00579 tRNA synthetases class I (W and Y) P613_RS00025 PF01594 AI-2E family transporter P613_RS00035 PF02457 DisA bacterial checkpoint controller nucleotide-binding P613_RS00040 PF07949 YbbR-like protein P613_RS00045 PF01648 4'-phosphopantetheinyl transferase superfamily P613_RS00050 PF09986 Uncharacterized protein conserved in bacteria (DUF2225) P613_RS00055 PF01416 tRNA pseudouridine synthase P613_RS00065 PF17764 3′ DNA-binding domain (3′BD) P613_RS00065 PF18074 Primosomal protein N C-terminal domain P613_RS00065 PF18319 PriA DNA helicase Cys-rich region (CRR) domain P613_RS00065 PF04851 Type III restriction enzyme, res subunit P613_RS00065 PF00271 Helicase conserved C-terminal domain P613_RS00070 PF00485 Phosphoribulokinase / Uridine kinase family P613_RS00080 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 P613_RS00080 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) P613_RS00085 PF00849 RNA pseudouridylate synthase P613_RS00095 PF00365 Phosphofructokinase P613_RS00100 PF02547 Queuosine biosynthesis protein P613_RS00105 PF17864 RuvB AAA lid domain P613_RS00105 PF05491 RuvB C-terminal winged helix domain P613_RS00105 PF05496 Holliday junction DNA helicase RuvB P-loop domain P613_RS00110 PF01330 RuvA N terminal domain P613_RS00115 PF07995 Glucose / Sorbosone dehydrogenase P613_RS00120 PF01709 Transcriptional regulator P613_RS00125 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain P613_RS00125 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain P613_RS00140 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 P613_RS00150 PF10502 Signal peptidase, peptidase S26 P613_RS00155 PF08308 PEGA domain P613_RS00155 PF03781 Sulfatase-modifying factor enzyme 1 P613_RS00160 PF01668 SmpB protein P613_RS00170 PF00521 DNA gyrase/topoisomerase IV, subunit A P613_RS00175 PF00204 DNA gyrase B P613_RS00175 PF00986 DNA gyrase B subunit, carboxyl terminus P613_RS00175 PF01751 Toprim domain P613_RS00175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase P613_RS00180 PF01553 Acyltransferase P613_RS00195 PF01739 CheR methyltransferase, SAM binding domain P613_RS00195 PF03705 CheR methyltransferase, all-alpha domain P613_RS00200 PF01895 PhoU domain P613_RS00215 PF02463 RecF/RecN/SMC N terminal domain P613_RS00215 PF06470 SMC proteins Flexible Hinge Domain P613_RS00220 PF01351 Ribonuclease HII P613_RS00235 PF02592 Putative vitamin uptake transporter P613_RS00245 PF00588 SpoU rRNA Methylase family P613_RS00250 PF03167 Uracil DNA glycosylase superfamily P613_RS00255 PF03840 Preprotein translocase SecG subunit P613_RS00260 PF00121 Triosephosphate isomerase P613_RS00265 PF00162 Phosphoglycerate kinase P613_RS00270 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain P613_RS00270 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain P613_RS00280 PF00571 CBS domain P613_RS00280 PF03471 Transporter associated domain P613_RS00285 PF02130 Uncharacterized protein family UPF0054 P613_RS00290 PF00085 Thioredoxin P613_RS00295 PF04452 RNA methyltransferase P613_RS00300 PF03793 PASTA domain P613_RS00305 PF02911 Formyl transferase, C-terminal domain P613_RS00305 PF00551 Formyl transferase P613_RS00310 PF01327 Polypeptide deformylase P613_RS00320 PF01321 Creatinase/Prolidase N-terminal domain P613_RS00320 PF00557 Metallopeptidase family M24 P613_RS00330 PF02073 Thermophilic metalloprotease (M29) P613_RS00335 PF02681 Divergent PAP2 family P613_RS00355 PF00472 RF-1 domain P613_RS00355 PF03462 PCRF domain P613_RS00365 PF00448 SRP54-type protein, GTPase domain P613_RS00365 PF02881 SRP54-type protein, helical bundle domain P613_RS00375 PF02687 FtsX-like permease family P613_RS00375 PF12704 MacB-like periplasmic core domain P613_RS00380 PF00005 ABC transporter P613_RS00400 PF00266 Aminotransferase class-V P613_RS00405 PF01592 NifU-like N terminal domain P613_RS00410 PF01078 Magnesium chelatase, subunit ChlI P613_RS00410 PF13335 Magnesium chelatase, subunit ChlI C-terminal P613_RS00415 PF00056 lactate/malate dehydrogenase, NAD binding domain P613_RS00415 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain P613_RS00420 PF00679 Elongation factor G C-terminus P613_RS00420 PF14492 Elongation Factor G, domain II P613_RS00420 PF00009 Elongation factor Tu GTP binding domain P613_RS00420 PF03144 Elongation factor Tu domain 2 P613_RS00420 PF06421 GTP-binding protein LepA C-terminus P613_RS00440 PF01813 ATP synthase subunit D P613_RS00445 PF02874 ATP synthase alpha/beta family, beta-barrel domain P613_RS00445 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain P613_RS00450 PF16886 ATPsynthase alpha/beta subunit N-term extension P613_RS00450 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain P613_RS00450 PF02874 ATP synthase alpha/beta family, beta-barrel domain P613_RS00470 PF00488 MutS domain V P613_RS00470 PF01713 Smr domain P613_RS00475 PF03193 RsgA GTPase P613_RS00480 PF01177 Asp/Glu/Hydantoin racemase P613_RS00485 PF01336 OB-fold nucleic acid binding domain P613_RS00485 PF00152 tRNA synthetases class II (D, K and N) P613_RS00500 PF00595 PDZ domain P613_RS00505 PF00557 Metallopeptidase family M24 P613_RS00515 PF01029 NusB family P613_RS00525 PF02803 Thiolase, C-terminal domain P613_RS00525 PF00108 Thiolase, N-terminal domain P613_RS00535 PF00772 DnaB-like helicase N terminal domain P613_RS00535 PF03796 DnaB-like helicase C terminal domain P613_RS00540 PF03948 Ribosomal protein L9, C-terminal domain P613_RS00540 PF01281 Ribosomal protein L9, N-terminal domain P613_RS00545 PF01084 Ribosomal protein S18 P613_RS00550 PF00436 Single-strand binding protein family P613_RS00555 PF01250 Ribosomal protein S6 P613_RS00560 PF00367 phosphotransferase system, EIIB P613_RS00560 PF02378 Phosphotransferase system, EIIC P613_RS00560 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 P613_RS00565 PF03006 Haemolysin-III related P613_RS00570 PF02163 Peptidase family M50 P613_RS00570 PF17820 PDZ domain P613_RS00580 PF01255 Putative undecaprenyl diphosphate synthase P613_RS00585 PF01765 Ribosome recycling factor P613_RS00590 PF00889 Elongation factor TS P613_RS00595 PF00318 Ribosomal protein S2 P613_RS00615 PF00575 S1 RNA binding domain P613_RS00620 PF02224 Cytidylate kinase P613_RS00625 PF00849 RNA pseudouridylate synthase P613_RS00625 PF01479 S4 domain P613_RS00635 PF00154 recA bacterial DNA recombination protein P613_RS00640 PF01272 Transcription elongation factor, GreA/GreB, C-term P613_RS00640 PF03449 Transcription elongation factor, N-terminal P613_RS00655 PF03129 Anticodon binding domain P613_RS00655 PF13393 Histidyl-tRNA synthetase P613_RS00660 PF00905 Penicillin binding protein transpeptidase domain P613_RS00660 PF03717 Penicillin-binding Protein dimerisation domain P613_RS00660 PF03793 PASTA domain P613_RS00665 PF00501 AMP-binding enzyme P613_RS00675 PF00873 AcrB/AcrD/AcrF family P613_RS00690 PF01809 Putative membrane protein insertion efficiency factor P613_RS00695 PF04069 Substrate binding domain of ABC-type glycine betaine transport system P613_RS00700 PF00528 Binding-protein-dependent transport system inner membrane component P613_RS00705 PF00571 CBS domain P613_RS00705 PF00005 ABC transporter P613_RS00710 PF00700 Bacterial flagellin C-terminal helical region P613_RS00710 PF00669 Bacterial flagellin N-terminal helical region P613_RS00710 PF00460 Flagella basal body rod protein P613_RS00715 PF02465 Flagellar hook-associated protein 2 N-terminus P613_RS00715 PF07195 Flagellar hook-associated protein 2 C-terminus P613_RS00720 PF01979 Amidohydrolase family P613_RS00725 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase P613_RS00730 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain P613_RS00730 PF02777 Iron/manganese superoxide dismutases, C-terminal domain P613_RS00735 PF07516 SecA Wing and Scaffold domain P613_RS00735 PF02810 SEC-C motif P613_RS00735 PF07517 SecA DEAD-like domain P613_RS00735 PF01043 SecA preprotein cross-linking domain P613_RS00765 PF00842 Alanine racemase, C-terminal domain P613_RS00765 PF01168 Alanine racemase, N-terminal domain P613_RS00780 PF01699 Sodium/calcium exchanger protein P613_RS00790 PF02446 4-alpha-glucanotransferase P613_RS00805 PF01176 Translation initiation factor 1A / IF-1 P613_RS00825 PF00092 von Willebrand factor type A domain P613_RS00840 PF07726 ATPase family associated with various cellular activities (AAA) P613_RS00840 PF17863 AAA lid domain P613_RS00845 PF02527 rRNA small subunit methyltransferase G P613_RS00850 PF13932 GidA associated domain P613_RS00850 PF01134 Glucose inhibited division protein A P613_RS00855 PF10396 GTP-binding protein TrmE N-terminus P613_RS00855 PF01926 50S ribosome-binding GTPase P613_RS00855 PF12631 MnmE helical domain P613_RS00865 PF07196 Flagellin hook IN motif P613_RS00865 PF06429 Flagellar basal body rod FlgEFG protein C-terminal P613_RS00870 PF00669 Bacterial flagellin N-terminal helical region P613_RS00870 PF00700 Bacterial flagellin C-terminal helical region P613_RS00875 PF02623 FliW protein P613_RS00880 PF02599 Global regulator protein family P613_RS00890 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE P613_RS00900 PF00453 Ribosomal protein L20 P613_RS00905 PF01632 Ribosomal protein L35 P613_RS00910 PF00707 Translation initiation factor IF-3, C-terminal domain P613_RS00910 PF05198 Translation initiation factor IF-3, N-terminal domain P613_RS00925 PF01026 TatD related DNase P613_RS00935 PF00472 RF-1 domain P613_RS00935 PF03462 PCRF domain P613_RS00940 PF05175 Methyltransferase small domain P613_RS00945 PF04607 Region found in RelA / SpoT proteins P613_RS00945 PF02824 TGS domain P613_RS00955 PF07478 D-ala D-ala ligase C-terminus P613_RS00955 PF01820 D-ala D-ala ligase N-terminus P613_RS00960 PF01225 Mur ligase family, catalytic domain P613_RS00960 PF02875 Mur ligase family, glutamate ligase domain P613_RS00960 PF08245 Mur ligase middle domain P613_RS00970 PF01595 Cyclin M transmembrane N-terminal domain P613_RS00970 PF03471 Transporter associated domain P613_RS00970 PF00571 CBS domain P613_RS00975 PF01145 SPFH domain / Band 7 family P613_RS00980 PF01145 SPFH domain / Band 7 family P613_RS01005 PF00483 Nucleotidyl transferase P613_RS01025 PF08676 MutL C terminal dimerisation domain P613_RS01025 PF01119 DNA mismatch repair protein, C-terminal domain P613_RS01045 PF01132 Elongation factor P (EF-P) OB domain P613_RS01045 PF08207 Elongation factor P (EF-P) KOW-like domain P613_RS01045 PF09285 Elongation factor P, C-terminal P613_RS01050 PF12849 PBP superfamily domain P613_RS01055 PF00528 Binding-protein-dependent transport system inner membrane component P613_RS01060 PF00528 Binding-protein-dependent transport system inner membrane component P613_RS01065 PF00005 ABC transporter P613_RS01070 PF02535 ZIP Zinc transporter P613_RS01075 PF01411 tRNA synthetases class II (A) P613_RS01075 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain P613_RS01080 PF14841 FliG middle domain P613_RS01080 PF14842 FliG N-terminal domain P613_RS01080 PF01706 FliG C-terminal domain P613_RS01085 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase P613_RS01100 PF01207 Dihydrouridine synthase (Dus) P613_RS01105 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) P613_RS01105 PF02403 Seryl-tRNA synthetase N-terminal domain P613_RS01115 PF08367 Peptidase M16C associated P613_RS01115 PF00675 Insulinase (Peptidase family M16) P613_RS01115 PF05193 Peptidase M16 inactive domain P613_RS01120 PF01197 Ribosomal protein L31 P613_RS01125 PF07497 Rho termination factor, RNA-binding domain P613_RS01125 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain P613_RS01135 PF00216 Bacterial DNA-binding protein P613_RS01140 PF01649 Ribosomal protein S20 P613_RS01150 PF01926 50S ribosome-binding GTPase P613_RS01150 PF06071 Protein of unknown function (DUF933) P613_RS01160 PF00795 Carbon-nitrogen hydrolase P613_RS01170 PF01712 Deoxynucleoside kinase P613_RS01180 PF00230 Major intrinsic protein P613_RS01185 PF02782 FGGY family of carbohydrate kinases, C-terminal domain P613_RS01185 PF00370 FGGY family of carbohydrate kinases, N-terminal domain P613_RS01195 PF01266 FAD dependent oxidoreductase P613_RS01195 PF16901 C-terminal domain of alpha-glycerophosphate oxidase P613_RS01210 PF01551 Peptidase family M23 P613_RS01215 PF01725 Ham1 family P613_RS01220 PF01432 Peptidase family M3 P613_RS01220 PF08439 Oligopeptidase F P613_RS01230 PF09335 SNARE associated Golgi protein P613_RS01240 PF08264 Anticodon-binding domain of tRNA P613_RS01240 PF13603 Leucyl-tRNA synthetase, Domain 2 P613_RS01240 PF00133 tRNA synthetases class I (I, L, M and V) P613_RS01240 PF09334 tRNA synthetases class I (M) P613_RS01250 PF00004 ATPase family associated with various cellular activities (AAA) P613_RS01250 PF05362 Lon protease (S16) C-terminal proteolytic domain P613_RS01250 PF02190 ATP-dependent protease La (LON) substrate-binding domain P613_RS01255 PF01368 DHH family P613_RS01255 PF02272 DHHA1 domain P613_RS01255 PF17768 RecJ OB domain P613_RS01260 PF08525 Opacity-associated protein A N-terminal motif P613_RS01260 PF01551 Peptidase family M23 P613_RS01260 PF01476 LysM domain P613_RS01265 PF01165 Ribosomal protein S21 P613_RS01270 PF09397 Ftsk gamma domain P613_RS01270 PF01580 FtsK/SpoIIIE family P613_RS01270 PF17854 FtsK alpha domain P613_RS01275 PF02673 Bacitracin resistance protein BacA P613_RS01280 PF14718 Soluble lytic murein transglycosylase L domain P613_RS01280 PF01464 Transglycosylase SLT domain P613_RS01295 PF08460 Bacterial SH3 domain P613_RS01295 PF01551 Peptidase family M23 P613_RS01300 PF10502 Signal peptidase, peptidase S26 P613_RS01305 PF00012 Hsp70 protein P613_RS01330 PF10609 NUBPL iron-transfer P-loop NTPase P613_RS01335 PF00448 SRP54-type protein, GTPase domain P613_RS01340 PF00771 FHIPEP family P613_RS01345 PF01312 FlhB HrpN YscU SpaS Family P613_RS01350 PF01311 Bacterial export proteins, family 1 P613_RS01355 PF01313 Bacterial export proteins, family 3 P613_RS01360 PF00813 FliP family P613_RS01370 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term P613_RS01375 PF02154 Flagellar motor switch protein FliM P613_RS01375 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term P613_RS01380 PF03748 Flagellar basal body-associated protein FliL P613_RS01385 PF13677 Membrane MotB of proton-channel complex MotA/MotB P613_RS01385 PF00691 OmpA family P613_RS01390 PF01618 MotA/TolQ/ExbB proton channel family P613_RS01395 PF06289 Flagellar and Swarming motility proteins P613_RS01400 PF00460 Flagella basal body rod protein P613_RS01400 PF06429 Flagellar basal body rod FlgEFG protein C-terminal P613_RS01400 PF07559 Flagellar basal body protein FlaE P613_RS01405 PF03963 Flagellar hook capping protein - N-terminal region P613_RS01425 PF18269 T3SS EscN ATPase C-terminal domain P613_RS01425 PF02874 ATP synthase alpha/beta family, beta-barrel domain P613_RS01425 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain P613_RS01430 PF02108 Flagellar assembly protein FliH P613_RS01435 PF14842 FliG N-terminal domain P613_RS01435 PF14841 FliG middle domain P613_RS01435 PF01706 FliG C-terminal domain P613_RS01440 PF08345 Flagellar M-ring protein C-terminal P613_RS01440 PF01514 Secretory protein of YscJ/FliF family P613_RS01445 PF02049 Flagellar hook-basal body complex protein FliE P613_RS01450 PF00460 Flagella basal body rod protein P613_RS01450 PF06429 Flagellar basal body rod FlgEFG protein C-terminal P613_RS01455 PF00460 Flagella basal body rod protein P613_RS01460 PF07724 AAA domain (Cdc48 subfamily) P613_RS01465 PF00227 Proteasome subunit P613_RS01470 PF02481 DNA recombination-mediator protein A P613_RS01475 PF00515 Tetratricopeptide repeat P613_RS01480 PF12327 FtsZ family, C-terminal domain P613_RS01480 PF00091 Tubulin/FtsZ family, GTPase domain P613_RS01485 PF02491 SHS2 domain inserted in FTSA P613_RS01495 PF01098 Cell cycle protein P613_RS01500 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 P613_RS01500 PF00953 Glycosyl transferase family 4 P613_RS01505 PF01225 Mur ligase family, catalytic domain P613_RS01505 PF02875 Mur ligase family, glutamate ligase domain P613_RS01505 PF08245 Mur ligase middle domain P613_RS01515 PF01795 MraW methylase family P613_RS01535 PF01513 ATP-NAD kinase P613_RS01540 PF01584 CheW-like domain P613_RS01545 PF01728 FtsJ-like methyltransferase P613_RS01550 PF00348 Polyprenyl synthetase P613_RS01570 PF00005 ABC transporter P613_RS01610 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle P613_RS01615 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle P613_RS01620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle P613_RS01625 PF00528 Binding-protein-dependent transport system inner membrane component P613_RS01630 PF12911 N-terminal TM domain of oligopeptide transport permease C P613_RS01630 PF00528 Binding-protein-dependent transport system inner membrane component P613_RS01635 PF00005 ABC transporter P613_RS01635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region P613_RS01640 PF00005 ABC transporter P613_RS01640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region P613_RS01650 PF03952 Enolase, N-terminal domain P613_RS01650 PF00113 Enolase, C-terminal TIM barrel domain P613_RS01655 PF00380 Ribosomal protein S9/S16 P613_RS01660 PF00572 Ribosomal protein L13 P613_RS01670 PF02637 GatB domain P613_RS01670 PF02934 GatB/GatE catalytic domain P613_RS01675 PF01425 Amidase P613_RS01685 PF13361 UvrD-like helicase C-terminal domain P613_RS01685 PF00580 UvrD/REP helicase N-terminal domain P613_RS01705 PF00224 Pyruvate kinase, barrel domain P613_RS01705 PF02887 Pyruvate kinase, alpha/beta domain P613_RS01715 PF00830 Ribosomal L28 family P613_RS01750 PF04452 RNA methyltransferase P613_RS01755 PF17820 PDZ domain P613_RS01755 PF03572 Peptidase family S41 P613_RS01755 PF01471 Putative peptidoglycan binding domain P613_RS01760 PF10609 NUBPL iron-transfer P-loop NTPase P613_RS01765 PF01790 Prolipoprotein diacylglyceryl transferase P613_RS01770 PF00563 EAL domain P613_RS01775 PF02142 MGS-like domain P613_RS01785 PF02127 Aminopeptidase I zinc metalloprotease (M18) P613_RS01790 PF00367 phosphotransferase system, EIIB P613_RS01795 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus P613_RS01795 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus P613_RS01800 PF02861 Clp amino terminal domain, pathogenicity island component P613_RS01800 PF17871 AAA lid domain P613_RS01800 PF00004 ATPase family associated with various cellular activities (AAA) P613_RS01800 PF07724 AAA domain (Cdc48 subfamily) P613_RS01800 PF10431 C-terminal, D2-small domain, of ClpB protein P613_RS01805 PF01479 S4 domain P613_RS01805 PF00579 tRNA synthetases class I (W and Y) P613_RS01810 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) P613_RS01810 PF03129 Anticodon binding domain P613_RS01815 PF00749 tRNA synthetases class I (E and Q), catalytic domain P613_RS01830 PF01048 Phosphorylase superfamily P613_RS01835 PF02773 S-adenosylmethionine synthetase, C-terminal domain P613_RS01835 PF00438 S-adenosylmethionine synthetase, N-terminal domain P613_RS01835 PF02772 S-adenosylmethionine synthetase, central domain P613_RS01840 PF02664 S-Ribosylhomocysteinase (LuxS) P613_RS01850 PF01230 HIT domain P613_RS01855 PF03448 MgtE intracellular N domain P613_RS01855 PF01769 Divalent cation transporter P613_RS01855 PF00571 CBS domain P613_RS01860 PF01204 Trehalase P613_RS01865 PF02608 ABC transporter substrate-binding protein PnrA-like P613_RS01870 PF02608 ABC transporter substrate-binding protein PnrA-like P613_RS01875 PF02608 ABC transporter substrate-binding protein PnrA-like P613_RS01880 PF02608 ABC transporter substrate-binding protein PnrA-like P613_RS01885 PF00177 Ribosomal protein S7p/S5e P613_RS01890 PF00164 Ribosomal protein S12/S23 P613_RS01895 PF04998 RNA polymerase Rpb1, domain 5 P613_RS01895 PF05000 RNA polymerase Rpb1, domain 4 P613_RS01895 PF04983 RNA polymerase Rpb1, domain 3 P613_RS01895 PF00623 RNA polymerase Rpb1, domain 2 P613_RS01895 PF04997 RNA polymerase Rpb1, domain 1 P613_RS01900 PF00562 RNA polymerase Rpb2, domain 6 P613_RS01900 PF04565 RNA polymerase Rpb2, domain 3 P613_RS01900 PF04561 RNA polymerase Rpb2, domain 2 P613_RS01900 PF10385 RNA polymerase beta subunit external 1 domain P613_RS01900 PF04563 RNA polymerase beta subunit P613_RS01900 PF04560 RNA polymerase Rpb2, domain 7 P613_RS01905 PF16320 Ribosomal protein L7/L12 dimerisation domain P613_RS01905 PF00542 Ribosomal protein L7/L12 C-terminal domain P613_RS01910 PF00466 Ribosomal protein L10 P613_RS01915 PF00687 Ribosomal protein L1p/L10e family P613_RS01920 PF00298 Ribosomal protein L11, RNA binding domain P613_RS01920 PF03946 Ribosomal protein L11, N-terminal domain P613_RS01925 PF02357 Transcription termination factor nusG P613_RS01930 PF00584 SecE/Sec61-gamma subunits of protein translocation complex P613_RS01940 PF00471 Ribosomal protein L33 P613_RS01960 PF12796 Ankyrin repeats (3 copies) P613_RS01975 PF09180 Prolyl-tRNA synthetase, C-terminal P613_RS01975 PF03129 Anticodon binding domain P613_RS01975 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) P613_RS02000 PF01238 Phosphomannose isomerase type I P613_RS02005 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 P613_RS02005 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit P613_RS02005 PF02378 Phosphotransferase system, EIIC P613_RS02030 PF01739 CheR methyltransferase, SAM binding domain P613_RS02030 PF03705 CheR methyltransferase, all-alpha domain P613_RS02035 PF01339 CheB methylesterase P613_RS02035 PF00072 Response regulator receiver domain P613_RS02045 PF05191 Adenylate kinase, active site lid P613_RS02055 PF00072 Response regulator receiver domain P613_RS02060 PF00072 Response regulator receiver domain P613_RS02060 PF01627 Hpt domain P613_RS02060 PF00672 HAMP domain P613_RS02060 PF00512 His Kinase A (phospho-acceptor) domain P613_RS02060 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) P613_RS02060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase P613_RS02090 PF02245 Methylpurine-DNA glycosylase (MPG) P613_RS02115 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases P613_RS02130 PF01205 Uncharacterized protein family UPF0029 P613_RS02130 PF09186 Domain of unknown function (DUF1949) P613_RS02135 PF13614 AAA domain P613_RS02145 PF17762 HTH domain found in ParB protein P613_RS02145 PF02195 ParB-like nuclease domain P613_RS02150 PF03989 DNA gyrase C-terminal domain, beta-propeller P613_RS02150 PF00521 DNA gyrase/topoisomerase IV, subunit A P613_RS02155 PF00986 DNA gyrase B subunit, carboxyl terminus P613_RS02155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase P613_RS02155 PF01751 Toprim domain P613_RS02155 PF00204 DNA gyrase B P613_RS02160 PF08299 Bacterial dnaA protein helix-turn-helix P613_RS02160 PF00308 Bacterial dnaA protein P613_RS02160 PF11638 DnaA N-terminal domain P613_RS02165 PF00712 DNA polymerase III beta subunit, N-terminal domain P613_RS02165 PF02768 DNA polymerase III beta subunit, C-terminal domain P613_RS02165 PF02767 DNA polymerase III beta subunit, central domain P613_RS02175 PF00468 Ribosomal protein L34 P613_RS02180 PF00825 Ribonuclease P P613_RS02185 PF02096 60Kd inner membrane protein P613_RS02195 PF01370 NAD dependent epimerase/dehydratase family P613_RS02200 PF01116 Fructose-bisphosphate aldolase class-II P613_RS02205 PF02938 GAD domain P613_RS02205 PF00152 tRNA synthetases class II (D, K and N) P613_RS02205 PF01336 OB-fold nucleic acid binding domain P613_RS02210 PF00999 Sodium/hydrogen exchanger family P613_RS02225 PF00309 Sigma-54 factor, Activator interacting domain (AID) P613_RS02225 PF04552 Sigma-54, DNA binding domain P613_RS02225 PF04963 Sigma-54 factor, core binding domain P613_RS02230 PF02417 Chromate transporter P613_RS02240 PF05552 Conserved TM helix P613_RS02240 PF00924 Mechanosensitive ion channel P613_RS02245 PF13439 Glycosyltransferase Family 4 P613_RS02245 PF00534 Glycosyl transferases group 1 P613_RS02260 PF01541 GIY-YIG catalytic domain P613_RS02260 PF08459 UvrC Helix-hairpin-helix N-terminal P613_RS02305 PF12169 DNA polymerase III subunits gamma and tau domain III P613_RS02310 PF02575 YbaB/EbfC DNA-binding family P613_RS02315 PF00334 Nucleoside diphosphate kinase P613_RS02330 PF12399 Branched-chain amino acid ATP-binding cassette transporter P613_RS02330 PF00005 ABC transporter P613_RS02335 PF02578 Multi-copper polyphenol oxidoreductase laccase P613_RS02340 PF01784 NIF3 (NGG1p interacting factor 3) P613_RS02345 PF01252 Signal peptidase (SPase) II P613_RS02360 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) P613_RS02365 PF01554 MatE P613_RS02375 PF03144 Elongation factor Tu domain 2 P613_RS02375 PF00009 Elongation factor Tu GTP binding domain P613_RS02375 PF03143 Elongation factor Tu C-terminal domain P613_RS02380 PF00338 Ribosomal protein S10p/S20e P613_RS02385 PF00297 Ribosomal protein L3 P613_RS02390 PF00573 Ribosomal protein L4/L1 family P613_RS02395 PF00276 Ribosomal protein L23 P613_RS02400 PF00181 Ribosomal Proteins L2, RNA binding domain P613_RS02400 PF03947 Ribosomal Proteins L2, C-terminal domain P613_RS02405 PF00203 Ribosomal protein S19 P613_RS02410 PF00237 Ribosomal protein L22p/L17e P613_RS02415 PF07650 KH domain P613_RS02415 PF00189 Ribosomal protein S3, C-terminal domain P613_RS02420 PF00252 Ribosomal protein L16p/L10e P613_RS02425 PF00831 Ribosomal L29 protein P613_RS02430 PF00366 Ribosomal protein S17 P613_RS02435 PF00238 Ribosomal protein L14p/L23e P613_RS02440 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 P613_RS02440 PF00467 KOW motif P613_RS02445 PF00281 Ribosomal protein L5 P613_RS02445 PF00673 ribosomal L5P family C-terminus P613_RS02450 PF00410 Ribosomal protein S8 P613_RS02455 PF00347 Ribosomal protein L6 P613_RS02460 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast P613_RS02465 PF00333 Ribosomal protein S5, N-terminal domain P613_RS02465 PF03719 Ribosomal protein S5, C-terminal domain P613_RS02470 PF00327 Ribosomal protein L30p/L7e P613_RS02475 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A P613_RS02480 PF00344 SecY translocase P613_RS02485 PF00444 Ribosomal protein L36 P613_RS02490 PF00416 Ribosomal protein S13/S18 P613_RS02495 PF00411 Ribosomal protein S11 P613_RS02500 PF01000 RNA polymerase Rpb3/RpoA insert domain P613_RS02500 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain P613_RS02500 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain P613_RS02505 PF01196 Ribosomal protein L17 P613_RS02510 PF12072 Domain of unknown function (DUF3552) P613_RS02510 PF01966 HD domain P613_RS02510 PF00013 KH domain P613_RS02515 PF13277 YmdB-like protein P613_RS02520 PF01728 FtsJ-like methyltransferase P613_RS02520 PF01479 S4 domain P613_RS02530 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal P613_RS02530 PF01926 50S ribosome-binding GTPase P613_RS02540 PF13419 Haloacid dehalogenase-like hydrolase P613_RS02550 PF01409 tRNA synthetases class II core domain (F) P613_RS02555 PF18262 Phe-tRNA synthetase beta subunit B1 domain P613_RS02555 PF03484 tRNA synthetase B5 domain P613_RS02555 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain P613_RS02560 PF07992 Pyridine nucleotide-disulphide oxidoreductase P613_RS02565 PF00588 SpoU rRNA Methylase family P613_RS02565 PF08032 RNA 2'-O ribose methyltransferase substrate binding P613_RS02570 PF00226 DnaJ domain P613_RS02570 PF01556 DnaJ C terminal domain P613_RS02570 PF00684 DnaJ central domain P613_RS02575 PF00012 Hsp70 protein P613_RS02580 PF01025 GrpE P613_RS02585 PF00795 Carbon-nitrogen hydrolase P613_RS02585 PF02540 NAD synthase P613_RS02605 PF03309 Type III pantothenate kinase P613_RS02610 PF00248 Aldo/keto reductase family P613_RS02620 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase P613_RS02630 PF03099 Biotin/lipoate A/B protein ligase family P613_RS02630 PF12706 Beta-lactamase superfamily domain P613_RS02635 PF03372 Endonuclease/Exonuclease/phosphatase family P613_RS02645 PF00675 Insulinase (Peptidase family M16) P613_RS02645 PF05193 Peptidase M16 inactive domain P613_RS02670 PF01027 Inhibitor of apoptosis-promoting Bax1 P613_RS02675 PF14492 Elongation Factor G, domain II P613_RS02675 PF00679 Elongation factor G C-terminus P613_RS02675 PF03144 Elongation factor Tu domain 2 P613_RS02675 PF00009 Elongation factor Tu GTP binding domain P613_RS02675 PF03764 Elongation factor G, domain IV P613_RS02695 PF14572 Phosphoribosyl synthetase-associated domain P613_RS02695 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase P613_RS02710 PF01121 Dephospho-CoA kinase P613_RS02715 PF01367 5'-3' exonuclease, C-terminal SAM fold P613_RS02715 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain P613_RS02715 PF00476 DNA polymerase family A P613_RS02715 PF01612 3'-5' exonuclease P613_RS02730 PF00072 Response regulator receiver domain P613_RS02735 PF00533 BRCA1 C Terminus (BRCT) domain P613_RS02735 PF01653 NAD-dependent DNA ligase adenylation domain P613_RS02735 PF03120 NAD-dependent DNA ligase OB-fold domain P613_RS02760 PF00381 PTS HPr component phosphorylation site P613_RS02765 PF05524 PEP-utilising enzyme, N-terminal P613_RS02765 PF02896 PEP-utilising enzyme, TIM barrel domain P613_RS02765 PF00391 PEP-utilising enzyme, mobile domain P613_RS02770 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 P613_RS02775 PF00183 Hsp90 protein P613_RS02780 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain P613_RS02780 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase P613_RS02800 PF01584 CheW-like domain P613_RS02810 PF02895 Signal transducing histidine kinase, homodimeric domain P613_RS02810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase P613_RS02810 PF01627 Hpt domain P613_RS02810 PF07194 P2 response regulator binding domain P613_RS02810 PF01584 CheW-like domain P613_RS02815 PF01339 CheB methylesterase P613_RS02825 PF00486 Transcriptional regulatory protein, C terminal P613_RS02825 PF00072 Response regulator receiver domain P613_RS02835 PF00696 Amino acid kinase family P613_RS02840 PF00535 Glycosyl transferase family 2 P613_RS02845 PF00005 ABC transporter P613_RS02855 PF00117 Glutamine amidotransferase class-I P613_RS02855 PF06418 CTP synthase N-terminus P613_RS02870 PF12729 Four helix bundle sensory module for signal transduction P613_RS02870 PF00672 HAMP domain P613_RS02870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain P613_RS02875 PF01336 OB-fold nucleic acid binding domain P613_RS02875 PF02811 PHP domain P613_RS02875 PF07733 Bacterial DNA polymerase III alpha NTPase domain P613_RS02875 PF17657 Bacterial DNA polymerase III alpha subunit finger domain P613_RS02875 PF14579 Helix-hairpin-helix motif P613_RS02885 PF00270 DEAD/DEAH box helicase P613_RS02885 PF00271 Helicase conserved C-terminal domain P613_RS02885 PF17191 RecG wedge domain P613_RS02905 PF08245 Mur ligase middle domain P613_RS02910 PF02388 FemAB family P613_RS02915 PF01588 Putative tRNA binding domain P613_RS02915 PF09334 tRNA synthetases class I (M) P613_RS02915 PF08264 Anticodon-binding domain of tRNA P613_RS02920 PF01048 Phosphorylase superfamily P613_RS02925 PF01515 Phosphate acetyl/butaryl transferase P613_RS02930 PF00398 Ribosomal RNA adenine dimethylase P613_RS02945 PF00501 AMP-binding enzyme P613_RS02950 PF05746 DALR anticodon binding domain P613_RS02950 PF00750 tRNA synthetases class I (R) P613_RS02950 PF03485 Arginyl tRNA synthetase N terminal domain P613_RS02960 PF00672 HAMP domain P613_RS02960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain P613_RS02960 PF12729 Four helix bundle sensory module for signal transduction P613_RS02965 PF00672 HAMP domain P613_RS02965 PF05227 CHASE3 domain P613_RS02965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain P613_RS02970 PF01565 FAD binding domain P613_RS02970 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain P613_RS02975 PF01406 tRNA synthetases class I (C) catalytic domain P613_RS02985 PF00464 Serine hydroxymethyltransferase P613_RS02990 PF00684 DnaJ central domain P613_RS02990 PF01556 DnaJ C terminal domain P613_RS02990 PF00226 DnaJ domain P613_RS03000 PF02652 L-lactate permease P613_RS03005 PF00768 D-alanyl-D-alanine carboxypeptidase P613_RS03005 PF07943 Penicillin-binding protein 5, C-terminal domain P613_RS03010 PF03975 CheD chemotactic sensory transduction P613_RS03015 PF13361 UvrD-like helicase C-terminal domain P613_RS03015 PF00580 UvrD/REP helicase N-terminal domain P613_RS03020 PF07687 Peptidase dimerisation domain P613_RS03020 PF01546 Peptidase family M20/M25/M40 P613_RS03045 PF05697 Bacterial trigger factor protein (TF) P613_RS03045 PF05698 Bacterial trigger factor protein (TF) C-terminus P613_RS03050 PF00574 Clp protease P613_RS03055 PF06689 ClpX C4-type zinc finger P613_RS03055 PF10431 C-terminal, D2-small domain, of ClpB protein P613_RS03055 PF07724 AAA domain (Cdc48 subfamily) P613_RS03060 PF02190 ATP-dependent protease La (LON) substrate-binding domain P613_RS03060 PF05362 Lon protease (S16) C-terminal proteolytic domain P613_RS03060 PF00004 ATPase family associated with various cellular activities (AAA) P613_RS03065 PF01479 S4 domain P613_RS03065 PF00163 Ribosomal protein S4/S9 N-terminal domain P613_RS03095 PF00933 Glycosyl hydrolase family 3 N terminal domain P613_RS03110 PF00871 Acetokinase family P613_RS03115 PF02559 CarD-like/TRCF domain P613_RS03115 PF00270 DEAD/DEAH box helicase P613_RS03115 PF17757 UvrB interaction domain P613_RS03115 PF00271 Helicase conserved C-terminal domain P613_RS03115 PF03461 TRCF domain P613_RS03125 PF01520 N-acetylmuramoyl-L-alanine amidase P613_RS03125 PF08239 Bacterial SH3 domain P613_RS03140 PF02127 Aminopeptidase I zinc metalloprotease (M18) P613_RS03150 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit P613_RS03150 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 P613_RS03155 PF00294 pfkB family carbohydrate kinase P613_RS03170 PF13538 UvrD-like helicase C-terminal domain P613_RS03175 PF13361 UvrD-like helicase C-terminal domain P613_RS03175 PF00580 UvrD/REP helicase N-terminal domain P613_RS03175 PF12705 PD-(D/E)XK nuclease superfamily P613_RS03185 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family P613_RS03185 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain P613_RS03185 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain P613_RS03190 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain P613_RS03190 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain P613_RS03210 PF00528 Binding-protein-dependent transport system inner membrane component P613_RS03215 PF00528 Binding-protein-dependent transport system inner membrane component P613_RS03220 PF00005 ABC transporter P613_RS03220 PF08402 TOBE domain P613_RS03225 PF01926 50S ribosome-binding GTPase P613_RS03230 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase P613_RS03235 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 P613_RS03235 PF00367 phosphotransferase system, EIIB P613_RS03235 PF02378 Phosphotransferase system, EIIC P613_RS03255 PF00118 TCP-1/cpn60 chaperonin family P613_RS03265 PF02699 Preprotein translocase subunit P613_RS03270 PF02355 Protein export membrane protein P613_RS03275 PF02355 Protein export membrane protein P613_RS03285 PF01556 DnaJ C terminal domain P613_RS03285 PF00226 DnaJ domain P613_RS03290 PF04055 Radical SAM superfamily P613_RS03290 PF06969 HemN C-terminal domain P613_RS03295 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) P613_RS03300 PF00300 Histidine phosphatase superfamily (branch 1) P613_RS03305 PF01921 tRNA synthetases class I (K) P613_RS03310 PF07650 KH domain P613_RS03310 PF01926 50S ribosome-binding GTPase P613_RS03340 PF01520 N-acetylmuramoyl-L-alanine amidase P613_RS03350 PF04620 Flagellar filament outer layer protein Flaa P613_RS03355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase P613_RS03355 PF07194 P2 response regulator binding domain P613_RS03355 PF01627 Hpt domain P613_RS03355 PF02895 Signal transducing histidine kinase, homodimeric domain P613_RS03355 PF01584 CheW-like domain P613_RS03360 PF01584 CheW-like domain P613_RS03370 PF00072 Response regulator receiver domain P613_RS03390 PF13419 Haloacid dehalogenase-like hydrolase P613_RS03395 PF00005 ABC transporter P613_RS03400 PF02653 Branched-chain amino acid transport system / permease component P613_RS03405 PF02653 Branched-chain amino acid transport system / permease component P613_RS03410 PF00672 HAMP domain P613_RS03410 PF02203 Tar ligand binding domain homologue P613_RS03410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain P613_RS03415 PF02203 Tar ligand binding domain homologue P613_RS03415 PF00672 HAMP domain P613_RS03415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain P613_RS03425 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal P613_RS03425 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal P613_RS03430 PF01070 FMN-dependent dehydrogenase P613_RS03435 PF00368 Hydroxymethylglutaryl-coenzyme A reductase P613_RS03460 PF00188 Cysteine-rich secretory protein family P613_RS03465 PF00210 Ferritin-like domain P613_RS03470 PF03764 Elongation factor G, domain IV P613_RS03470 PF03144 Elongation factor Tu domain 2 P613_RS03470 PF00009 Elongation factor Tu GTP binding domain P613_RS03470 PF00679 Elongation factor G C-terminus P613_RS03470 PF14492 Elongation Factor G, domain II P613_RS03480 PF00448 SRP54-type protein, GTPase domain P613_RS03480 PF02881 SRP54-type protein, helical bundle domain P613_RS03480 PF02978 Signal peptide binding domain P613_RS03485 PF00886 Ribosomal protein S16 P613_RS03495 PF05239 PRC-barrel domain P613_RS03495 PF01782 RimM N-terminal domain P613_RS03500 PF01746 tRNA (Guanine-1)-methyltransferase P613_RS03505 PF01245 Ribosomal protein L19 P613_RS03515 PF01467 Cytidylyltransferase-like P613_RS03520 PF01783 Ribosomal L32p protein family P613_RS03525 PF00550 Phosphopantetheine attachment site P613_RS03530 PF00035 Double-stranded RNA binding motif P613_RS03530 PF14622 Ribonuclease-III-like P613_RS03535 PF12627 Probable RNA and SrmB- binding site of polymerase A P613_RS03535 PF01743 Poly A polymerase head domain P613_RS03535 PF13735 tRNA nucleotidyltransferase domain 2 putative P613_RS03560 PF02618 YceG-like family P613_RS03565 PF13662 Toprim domain P613_RS03565 PF08275 DNA primase catalytic core, N-terminal domain P613_RS03565 PF01807 CHC2 zinc finger P613_RS03565 PF10410 DnaB-helicase binding domain of primase P613_RS03570 PF03979 Sigma-70 factor, region 1.1 P613_RS03570 PF00140 Sigma-70 factor, region 1.2 P613_RS03570 PF04542 Sigma-70 region 2 P613_RS03570 PF04539 Sigma-70 region 3 P613_RS03570 PF04545 Sigma-70, region 4 P613_RS03600 PF03793 PASTA domain P613_RS03600 PF03717 Penicillin-binding Protein dimerisation domain P613_RS03600 PF00905 Penicillin binding protein transpeptidase domain P613_RS03605 PF01098 Cell cycle protein P613_RS03610 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain P613_RS03610 PF03129 Anticodon binding domain P613_RS03610 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) P613_RS03615 PF01066 CDP-alcohol phosphatidyltransferase P613_RS03630 PF02386 Cation transport protein P613_RS03640 PF02374 Anion-transporting ATPase P613_RS03640 PF17886 HSP20-like domain found in ArsA P613_RS03645 PF00365 Phosphofructokinase P613_RS03650 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain P613_RS03650 PF07992 Pyridine nucleotide-disulphide oxidoreductase P613_RS03655 PF00375 Sodium:dicarboxylate symporter family P613_RS03660 PF00342 Phosphoglucose isomerase P613_RS03665 PF02195 ParB-like nuclease domain P613_RS03665 PF17762 HTH domain found in ParB protein P613_RS03670 PF00905 Penicillin binding protein transpeptidase domain P613_RS03670 PF17092 Penicillin-binding protein OB-like domain P613_RS03670 PF00912 Transglycosylase P613_RS03680 PF03481 Putative GTP-binding controlling metal-binding P613_RS03680 PF01300 Telomere recombination P613_RS03685 PF03330 Lytic transglycolase P613_RS03685 PF05036 Sporulation related domain P613_RS03690 PF01207 Dihydrouridine synthase (Dus) P613_RS03695 PF10458 Valyl tRNA synthetase tRNA binding arm P613_RS03695 PF08264 Anticodon-binding domain of tRNA P613_RS03695 PF00133 tRNA synthetases class I (I, L, M and V) P613_RS03705 PF05430 S-adenosyl-L-methionine-dependent methyltransferase P613_RS03705 PF01266 FAD dependent oxidoreductase P613_RS03710 PF00166 Chaperonin 10 Kd subunit P613_RS03715 PF12848 ABC transporter P613_RS03715 PF00005 ABC transporter P613_RS03740 PF00633 Helix-hairpin-helix motif P613_RS03740 PF00730 HhH-GPD superfamily base excision DNA repair protein P613_RS03745 PF00528 Binding-protein-dependent transport system inner membrane component P613_RS03745 PF12911 N-terminal TM domain of oligopeptide transport permease C P613_RS03750 PF00528 Binding-protein-dependent transport system inner membrane component P613_RS03770 PF09822 ABC-type uncharacterized transport system P613_RS03780 PF00005 ABC transporter P613_RS03785 PF00753 Metallo-beta-lactamase superfamily P613_RS03785 PF12706 Beta-lactamase superfamily domain P613_RS03790 PF01266 FAD dependent oxidoreductase P613_RS03795 PF00574 Clp protease P613_RS03820 PF01551 Peptidase family M23 P613_RS03825 PF00072 Response regulator receiver domain P613_RS03825 PF00158 Sigma-54 interaction domain P613_RS03825 PF02954 Bacterial regulatory protein, Fis family P613_RS03830 PF00989 PAS fold P613_RS03830 PF00512 His Kinase A (phospho-acceptor) domain P613_RS03830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase P613_RS03830 PF13188 PAS domain P613_RS03830 PF13426 PAS domain P613_RS03835 PF09115 DNA polymerase III, delta subunit, C terminal P613_RS03845 PF04101 Glycosyltransferase family 28 C-terminal domain P613_RS03845 PF03033 Glycosyltransferase family 28 N-terminal domain P613_RS03850 PF08543 Phosphomethylpyrimidine kinase P613_RS03855 PF00814 Glycoprotease family P613_RS03865 PF04545 Sigma-70, region 4 P613_RS03865 PF03979 Sigma-70 factor, region 1.1 P613_RS03865 PF00140 Sigma-70 factor, region 1.2 P613_RS03865 PF04542 Sigma-70 region 2 P613_RS03865 PF04539 Sigma-70 region 3 P613_RS03875 PF02119 Flagellar P-ring protein P613_RS03885 PF00460 Flagella basal body rod protein P613_RS03885 PF06429 Flagellar basal body rod FlgEFG protein C-terminal P613_RS03890 PF06429 Flagellar basal body rod FlgEFG protein C-terminal P613_RS03890 PF00460 Flagella basal body rod protein P613_RS03900 PF00156 Phosphoribosyl transferase domain P613_RS03905 PF00829 Ribosomal prokaryotic L21 protein P613_RS03915 PF01016 Ribosomal L27 protein P613_RS03920 PF01926 50S ribosome-binding GTPase P613_RS03920 PF01018 GTP1/OBG P613_RS03925 PF01467 Cytidylyltransferase-like P613_RS03940 PF04026 SpoVG P613_RS03950 PF14693 Ribosomal protein TL5, C-terminal domain P613_RS03950 PF01386 Ribosomal L25p family P613_RS03955 PF01195 Peptidyl-tRNA hydrolase P613_RS03960 PF01171 PP-loop family P613_RS03965 PF06480 FtsH Extracellular P613_RS03965 PF00004 ATPase family associated with various cellular activities (AAA) P613_RS03965 PF01434 Peptidase family M41 P613_RS03965 PF17862 AAA+ lid domain P613_RS03985 PF02223 Thymidylate kinase P613_RS03995 PF01103 Surface antigen P613_RS03995 PF07244 Surface antigen variable number repeat P613_RS04005 PF05190 MutS family domain IV P613_RS04005 PF05188 MutS domain II P613_RS04005 PF01624 MutS domain I P613_RS04005 PF00488 MutS domain V P613_RS04005 PF05192 MutS domain III P613_RS04010 PF00156 Phosphoribosyl transferase domain P613_RS04015 PF02576 RimP N-terminal domain P613_RS04020 PF00575 S1 RNA binding domain P613_RS04020 PF08529 NusA N-terminal domain P613_RS04020 PF13184 NusA-like KH domain P613_RS04025 PF04760 Translation initiation factor IF-2, N-terminal region P613_RS04025 PF00009 Elongation factor Tu GTP binding domain P613_RS04025 PF11987 Translation-initiation factor 2 P613_RS04030 PF02033 Ribosome-binding factor A P613_RS04035 PF01509 TruB family pseudouridylate synthase (N terminal domain) P613_RS04040 PF00312 Ribosomal protein S15 P613_RS04045 PF00575 S1 RNA binding domain P613_RS04045 PF00013 KH domain P613_RS04045 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain P613_RS04045 PF03725 3' exoribonuclease family, domain 2 P613_RS04045 PF01138 3' exoribonuclease family, domain 1 P613_RS04065 PF01702 Queuine tRNA-ribosyltransferase P613_RS04070 PF03023 Lipid II flippase MurJ P613_RS04080 PF04127 DNA / pantothenate metabolism flavoprotein P613_RS04080 PF02441 Flavoprotein P613_RS04090 PF00474 Sodium:solute symporter family P613_RS04095 PF00849 RNA pseudouridylate synthase P613_RS04105 PF02875 Mur ligase family, glutamate ligase domain P613_RS04105 PF01225 Mur ligase family, catalytic domain P613_RS04105 PF08245 Mur ligase middle domain P613_RS04110 PF03755 YicC-like family, N-terminal region P613_RS04110 PF08340 Domain of unknown function (DUF1732) P613_RS04150 PF00270 DEAD/DEAH box helicase P613_RS04150 PF04408 Helicase associated domain (HA2) P613_RS04150 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold P613_RS04150 PF00271 Helicase conserved C-terminal domain P613_RS04155 PF13368 Topoisomerase C-terminal repeat P613_RS04155 PF01751 Toprim domain P613_RS04155 PF01131 DNA topoisomerase P613_RS04160 PF00149 Calcineurin-like phosphoesterase P613_RS04165 PF13476 AAA domain P613_RS04170 PF00480 ROK family P613_RS04180 PF08264 Anticodon-binding domain of tRNA P613_RS04180 PF00133 tRNA synthetases class I (I, L, M and V) P613_RS04185 PF07724 AAA domain (Cdc48 subfamily) P613_RS04185 PF02861 Clp amino terminal domain, pathogenicity island component P613_RS04185 PF17871 AAA lid domain P613_RS04185 PF10431 C-terminal, D2-small domain, of ClpB protein P613_RS04185 PF00004 ATPase family associated with various cellular activities (AAA) P613_RS04190 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III P613_RS04190 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain P613_RS04190 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II P613_RS04190 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I P613_RS04195 PF17757 UvrB interaction domain P613_RS04195 PF02151 UvrB/uvrC motif P613_RS04195 PF04851 Type III restriction enzyme, res subunit P613_RS04195 PF00271 Helicase conserved C-terminal domain P613_RS04195 PF12344 Ultra-violet resistance protein B P613_RS04200 PF17755 UvrA DNA-binding domain P613_RS04200 PF00005 ABC transporter P613_RS04200 PF17760 UvrA interaction domain P613_RS04230 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain P613_RS04230 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain P613_RS04235 PF03606 C4-dicarboxylate anaerobic carrier P613_RS04250 PF01048 Phosphorylase superfamily P613_RS04395 PF00365 Phosphofructokinase P613_RS04460 PF02457 DisA bacterial checkpoint controller nucleotide-binding P613_RS04510 PF00365 Phosphofructokinase P613_RS04535 PF01330 RuvA N terminal domain P613_RS04600 PF00521 DNA gyrase/topoisomerase IV, subunit A P613_RS04605 PF00521 DNA gyrase/topoisomerase IV, subunit A P613_RS04610 PF00204 DNA gyrase B P613_RS04610 PF00986 DNA gyrase B subunit, carboxyl terminus P613_RS04610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase P613_RS04610 PF01751 Toprim domain P613_RS04715 PF03167 Uracil DNA glycosylase superfamily P613_RS04730 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain P613_RS04730 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain