P613_RS00065	SM00487	DEAD-like helicases superfamily
P613_RS00065	SM00490	helicase superfamily c-terminal domain
P613_RS00075	SM00450	Rhodanese Homology Domain
P613_RS00105	SM00382	ATPases associated with a variety of cellular activities
P613_RS00110	SM00278	Helix-hairpin-helix DNA-binding motif class 1
P613_RS00170	SM00434	DNA Topoisomerase IV
P613_RS00175	SM00387	Histidine kinase-like ATPases
P613_RS00175	SM00433	TopoisomeraseII
P613_RS00180	SM00563	Phosphate acyltransferases
P613_RS00195	SM00138	Methyltransferase, chemotaxis proteins 
P613_RS00225	SM00712	DNA/RNA-binding repeats in PUR-alpha/beta/gamma and in hypothetical proteins from spirochetes and the Bacteroides-Cytophaga-Flexibacter bacteria.
P613_RS00250	SM00986	Uracil DNA glycosylase superfamily
P613_RS00250	SM00987	UreE urease accessory protein, C-terminal domain 
P613_RS00270	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
P613_RS00275	SM00028	Tetratricopeptide repeats
P613_RS00280	SM01091	Transporter associated domain
P613_RS00300	SM00740	P613_RS00300
P613_RS00355	SM00937	P613_RS00355
P613_RS00365	SM00382	ATPases associated with a variety of cellular activities
P613_RS00365	SM00962	SRP54-type protein, GTPase domain
P613_RS00380	SM00382	ATPases associated with a variety of cellular activities
P613_RS00410	SM00382	ATPases associated with a variety of cellular activities
P613_RS00420	SM00838	Elongation factor G C-terminus
P613_RS00470	SM00463	Small MutS-related domain
P613_RS00470	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
P613_RS00470	SM00534	ATPase domain of DNA mismatch repair MUTS family
P613_RS00500	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
P613_RS00510	SM00028	Tetratricopeptide repeats
P613_RS00570	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
P613_RS00615	SM00316	Ribosomal protein S1-like RNA-binding domain
P613_RS00625	SM00363	S4 RNA-binding domain
P613_RS00635	SM00382	ATPases associated with a variety of cellular activities
P613_RS00650	SM00028	Tetratricopeptide repeats
P613_RS00660	SM00740	P613_RS00660
P613_RS00690	SM01234	P613_RS00690
P613_RS00705	SM00382	ATPases associated with a variety of cellular activities
P613_RS00735	SM00957	SecA DEAD-like domain
P613_RS00735	SM00958	SecA preprotein cross-linking domain
P613_RS00765	SM01005	Alanine racemase, C-terminal domain
P613_RS00805	SM00316	Ribosomal protein S1-like RNA-binding domain
P613_RS00810	SM00287	Bacterial SH3 domain homologues
P613_RS00815	SM00028	Tetratricopeptide repeats
P613_RS00820	SM00327	von Willebrand factor (vWF) type A domain
P613_RS00825	SM00327	von Willebrand factor (vWF) type A domain
P613_RS00835	SM00327	von Willebrand factor (vWF) type A domain
P613_RS00850	SM01228	P613_RS00850
P613_RS00930	SM00028	Tetratricopeptide repeats
P613_RS00935	SM00937	P613_RS00935
P613_RS00945	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
P613_RS00945	SM00954	Region found in RelA / SpoT proteins
P613_RS00970	SM00116	Domain in cystathionine beta-synthase and other proteins.
P613_RS00970	SM01091	Transporter associated domain
P613_RS00975	SM00244	prohibitin homologues
P613_RS00980	SM00244	prohibitin homologues
P613_RS01015	SM00028	Tetratricopeptide repeats
P613_RS01020	SM00028	Tetratricopeptide repeats
P613_RS01025	SM00853	MutL C terminal dimerisation domain
P613_RS01025	SM01340	P613_RS01025
P613_RS01045	SM00841	Elongation factor P, C-terminal
P613_RS01045	SM01185	P613_RS01045
P613_RS01065	SM00382	ATPases associated with a variety of cellular activities
P613_RS01075	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
P613_RS01115	SM01264	P613_RS01115
P613_RS01125	SM00357	Cold shock protein domain
P613_RS01125	SM00382	ATPases associated with a variety of cellular activities
P613_RS01135	SM00411	bacterial (prokaryotic) histone like domain
P613_RS01250	SM00382	ATPases associated with a variety of cellular activities
P613_RS01250	SM00464	Found in ATP-dependent protease La (LON)
P613_RS01270	SM00843	P613_RS01270
P613_RS01290	SM00028	Tetratricopeptide repeats
P613_RS01295	SM00257	Lysin motif
P613_RS01320	SM01245	P613_RS01320
P613_RS01335	SM00382	ATPases associated with a variety of cellular activities
P613_RS01335	SM00962	SRP54-type protein, GTPase domain
P613_RS01425	SM00382	ATPases associated with a variety of cellular activities
P613_RS01460	SM00382	ATPases associated with a variety of cellular activities
P613_RS01460	SM01086	C-terminal, D2-small domain, of ClpB protein
P613_RS01475	SM00028	Tetratricopeptide repeats
P613_RS01480	SM00864	Tubulin/FtsZ family, GTPase domain
P613_RS01480	SM00865	Tubulin/FtsZ family, C-terminal domain
P613_RS01485	SM00842	Cell division protein FtsA
P613_RS01540	SM00260	Two component signalling adaptor domain
P613_RS01600	SM00028	Tetratricopeptide repeats
P613_RS01635	SM00382	ATPases associated with a variety of cellular activities
P613_RS01640	SM00382	ATPases associated with a variety of cellular activities
P613_RS01650	SM01192	P613_RS01650
P613_RS01650	SM01193	P613_RS01650
P613_RS01670	SM00845	GatB domain
P613_RS01740	SM01058	CarD-like/TRCF domain
P613_RS01755	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
P613_RS01755	SM00245	tail specific protease
P613_RS01770	SM00052	Putative diguanylate phosphodiesterase
P613_RS01775	SM00851	MGS-like domain
P613_RS01800	SM00382	ATPases associated with a variety of cellular activities
P613_RS01805	SM00363	S4 RNA-binding domain
P613_RS01825	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
P613_RS01855	SM00924	MgtE intracellular N domain
P613_RS01895	SM00663	RNA polymerase I subunit A N-terminus
P613_RS01920	SM00649	Ribosomal protein L11/L12
P613_RS01925	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
P613_RS01925	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
P613_RS01960	SM00248	ankyrin repeats
P613_RS01975	SM00946	Prolyl-tRNA synthetase, C-terminal
P613_RS02015	SM00477	DNA/RNA non-specific endonuclease
P613_RS02015	SM00892	DNA/RNA non-specific endonuclease
P613_RS02030	SM00138	Methyltransferase, chemotaxis proteins 
P613_RS02055	SM00267	diguanylate cyclase
P613_RS02055	SM00448	cheY-homologous receiver domain
P613_RS02060	SM00387	Histidine kinase-like ATPases
P613_RS02060	SM00388	His Kinase A (phosphoacceptor) domain
P613_RS02060	SM00448	cheY-homologous receiver domain
P613_RS02145	SM00470	ParB-like nuclease domain
P613_RS02150	SM00434	DNA Topoisomerase IV
P613_RS02155	SM00387	Histidine kinase-like ATPases
P613_RS02155	SM00433	TopoisomeraseII
P613_RS02160	SM00382	ATPases associated with a variety of cellular activities
P613_RS02160	SM00760	Bacterial dnaA protein helix-turn-helix domain
P613_RS02165	SM00480	DNA polymerase III beta subunit
P613_RS02190	SM00393	Putative single-stranded nucleic acids-binding domain
P613_RS02190	SM01245	P613_RS02190
P613_RS02210	SM00970	Sexual stage antigen s48/45 domain
P613_RS02260	SM00465	GIY-YIG type nucleases (URI domain)
P613_RS02265	SM00060	Fibronectin type 3 domain
P613_RS02270	SM00028	Tetratricopeptide repeats
P613_RS02305	SM00382	ATPases associated with a variety of cellular activities
P613_RS02315	SM00562	P613_RS02315
P613_RS02330	SM00382	ATPases associated with a variety of cellular activities
P613_RS02380	SM01403	P613_RS02380
P613_RS02400	SM01382	P613_RS02400
P613_RS02400	SM01383	P613_RS02400
P613_RS02415	SM00322	K homology RNA-binding domain
P613_RS02435	SM01374	P613_RS02435
P613_RS02440	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
P613_RS02500	SM00662	RNA polymerases D
P613_RS02510	SM00322	K homology RNA-binding domain
P613_RS02510	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
P613_RS02525	SM00909	Sporulation and spore germination
P613_RS02555	SM00873	B3/4 domain
P613_RS02555	SM00874	tRNA synthetase B5 domain
P613_RS02565	SM00967	RNA 2'-O ribose methyltransferase substrate binding
P613_RS02570	SM00271	DnaJ molecular chaperone homology domain
P613_RS02630	SM00849	Metallo-beta-lactamase superfamily
P613_RS02660	SM00028	Tetratricopeptide repeats
P613_RS02675	SM00838	Elongation factor G C-terminus
P613_RS02675	SM00889	Elongation factor G, domain IV
P613_RS02685	SM00028	Tetratricopeptide repeats
P613_RS02695	SM01400	P613_RS02695
P613_RS02715	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
P613_RS02715	SM00474	3'-5' exonuclease
P613_RS02715	SM00475	5'-3' exonuclease
P613_RS02715	SM00482	DNA polymerase A domain
P613_RS02730	SM00448	cheY-homologous receiver domain
P613_RS02735	SM00278	Helix-hairpin-helix DNA-binding motif class 1
P613_RS02735	SM00292	breast cancer carboxy-terminal domain
P613_RS02735	SM00532	Ligase N family
P613_RS02775	SM00387	Histidine kinase-like ATPases
P613_RS02780	SM01350	P613_RS02780
P613_RS02800	SM00260	Two component signalling adaptor domain
P613_RS02810	SM00073	Histidine Phosphotransfer domain
P613_RS02810	SM00260	Two component signalling adaptor domain
P613_RS02810	SM00387	Histidine kinase-like ATPases
P613_RS02810	SM01231	P613_RS02810
P613_RS02825	SM00448	cheY-homologous receiver domain
P613_RS02845	SM00382	ATPases associated with a variety of cellular activities
P613_RS02875	SM00481	DNA polymerase alpha chain like domain
P613_RS02885	SM00487	DEAD-like helicases superfamily
P613_RS02885	SM00490	helicase superfamily c-terminal domain
P613_RS02930	SM00650	Ribosomal RNA adenine dimethylases
P613_RS02950	SM00836	DALR anticodon binding domain
P613_RS02950	SM01016	Arginyl tRNA synthetase N terminal dom
P613_RS02960	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
P613_RS02965	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
P613_RS02990	SM00271	DnaJ molecular chaperone homology domain
P613_RS03005	SM00936	Penicillin-binding protein 5, C-terminal domain 
P613_RS03055	SM00382	ATPases associated with a variety of cellular activities
P613_RS03055	SM00994	ClpX C4-type zinc finger
P613_RS03055	SM01086	C-terminal, D2-small domain, of ClpB protein
P613_RS03060	SM00382	ATPases associated with a variety of cellular activities
P613_RS03060	SM00464	Found in ATP-dependent protease La (LON)
P613_RS03065	SM00363	S4 RNA-binding domain
P613_RS03065	SM01390	P613_RS03065
P613_RS03115	SM00487	DEAD-like helicases superfamily
P613_RS03115	SM00490	helicase superfamily c-terminal domain
P613_RS03115	SM00982	P613_RS03115
P613_RS03115	SM01058	CarD-like/TRCF domain
P613_RS03125	SM00257	Lysin motif
P613_RS03170	SM00382	ATPases associated with a variety of cellular activities
P613_RS03220	SM00382	ATPases associated with a variety of cellular activities
P613_RS03265	SM01323	P613_RS03265
P613_RS03285	SM00271	DnaJ molecular chaperone homology domain
P613_RS03290	SM00729	Elongator protein 3, MiaB family, Radical SAM
P613_RS03300	SM00855	Phosphoglycerate mutase family
P613_RS03340	SM00646	P613_RS03340
P613_RS03355	SM00073	Histidine Phosphotransfer domain
P613_RS03355	SM00260	Two component signalling adaptor domain
P613_RS03355	SM00387	Histidine kinase-like ATPases
P613_RS03355	SM01231	P613_RS03355
P613_RS03360	SM00138	Methyltransferase, chemotaxis proteins 
P613_RS03360	SM00260	Two component signalling adaptor domain
P613_RS03370	SM00448	cheY-homologous receiver domain
P613_RS03395	SM00382	ATPases associated with a variety of cellular activities
P613_RS03410	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
P613_RS03415	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
P613_RS03470	SM00838	Elongation factor G C-terminus
P613_RS03470	SM00889	Elongation factor G, domain IV
P613_RS03480	SM00382	ATPases associated with a variety of cellular activities
P613_RS03480	SM00962	SRP54-type protein, GTPase domain
P613_RS03480	SM00963	SRP54-type protein, helical bundle domain
P613_RS03530	SM00358	Double-stranded RNA binding motif
P613_RS03530	SM00535	Ribonuclease III family
P613_RS03565	SM00400	zinc finger
P613_RS03565	SM00493	P613_RS03565
P613_RS03580	SM00028	Tetratricopeptide repeats
P613_RS03610	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
P613_RS03625	SM01118	P613_RS03625
P613_RS03665	SM00470	ParB-like nuclease domain
P613_RS03710	SM00883	Chaperonin 10 Kd subunit
P613_RS03715	SM00382	ATPases associated with a variety of cellular activities
P613_RS03740	SM00478	endonuclease III
P613_RS03780	SM00382	ATPases associated with a variety of cellular activities
P613_RS03785	SM00849	Metallo-beta-lactamase superfamily
P613_RS03820	SM00257	Lysin motif
P613_RS03825	SM00382	ATPases associated with a variety of cellular activities
P613_RS03825	SM00448	cheY-homologous receiver domain
P613_RS03830	SM00387	Histidine kinase-like ATPases
P613_RS03830	SM00388	His Kinase A (phosphoacceptor) domain
P613_RS03965	SM00382	ATPases associated with a variety of cellular activities
P613_RS04000	SM00935	Outer membrane protein (OmpH-like)
P613_RS04005	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
P613_RS04005	SM00534	ATPase domain of DNA mismatch repair MUTS family
P613_RS04020	SM00316	Ribosomal protein S1-like RNA-binding domain
P613_RS04020	SM00322	K homology RNA-binding domain
P613_RS04040	SM01387	P613_RS04040
P613_RS04045	SM00316	Ribosomal protein S1-like RNA-binding domain
P613_RS04045	SM00322	K homology RNA-binding domain
P613_RS04095	SM00363	S4 RNA-binding domain
P613_RS04150	SM00487	DEAD-like helicases superfamily
P613_RS04150	SM00490	helicase superfamily c-terminal domain
P613_RS04150	SM00847	Helicase associated domain (HA2)  Add an annotation
P613_RS04155	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
P613_RS04155	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
P613_RS04155	SM00493	P613_RS04155
P613_RS04185	SM00382	ATPases associated with a variety of cellular activities
P613_RS04185	SM01086	C-terminal, D2-small domain, of ClpB protein
P613_RS04195	SM00487	DEAD-like helicases superfamily
P613_RS04195	SM00490	helicase superfamily c-terminal domain
P613_RS04535	SM00278	Helix-hairpin-helix DNA-binding motif class 1
P613_RS04600	SM00434	DNA Topoisomerase IV
P613_RS04715	SM00986	Uracil DNA glycosylase superfamily
P613_RS04715	SM00987	UreE urease accessory protein, C-terminal domain 
