CFK41_RS00030	SM01091	Transporter associated domain
CFK41_RS00085	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CFK41_RS00090	SM00947	Carbonic anhydrase
CFK41_RS00185	SM00420	helix_turn_helix, Deoxyribose operon repressor
CFK41_RS00185	SM01134	CFK41_RS00185
CFK41_RS00290	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CFK41_RS00290	SM00895	CFK41_RS00290
CFK41_RS00305	SM00422	helix_turn_helix, mercury resistance
CFK41_RS00350	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS00360	SM00529	Helix-turn-helix diphteria tox regulatory element
CFK41_RS00360	SM00899	CFK41_RS00360
CFK41_RS00370	SM00342	helix_turn_helix, arabinose operon control protein
CFK41_RS00405	SM01001	AIR carboxylase
CFK41_RS00420	SM00481	DNA polymerase alpha chain like domain
CFK41_RS00425	SM00354	helix_turn _helix lactose operon repressor
CFK41_RS00445	SM00421	helix_turn_helix, Lux Regulon
CFK41_RS00445	SM00448	cheY-homologous receiver domain
CFK41_RS00510	SM00347	helix_turn_helix multiple antibiotic resistance protein
CFK41_RS00515	SM00245	tail specific protease
CFK41_RS00545	SM00829	Enoylreductase
CFK41_RS00565	SM00354	helix_turn _helix lactose operon repressor
CFK41_RS00600	SM00530	Helix-turn-helix XRE-family like proteins 
CFK41_RS00610	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CFK41_RS00660	SM00346	helix_turn_helix isocitrate lyase regulation
CFK41_RS00770	SM00014	Acid phosphatase homologues
CFK41_RS00795	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS00890	SM00641	Glycosyl hydrolases family 25
CFK41_RS00930	SM01061	CAT RNA binding domain
CFK41_RS00995	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CFK41_RS01050	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS01055	SM00062	Bacterial periplasmic substrate-binding proteins
CFK41_RS01075	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS01110	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CFK41_RS01215	SM00796	Allophanate hydrolase subunit 1
CFK41_RS01215	SM00797	Allophanate hydrolase subunit 2
CFK41_RS01245	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS01330	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS01335	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS01375	SM00354	helix_turn _helix lactose operon repressor
CFK41_RS01385	SM01007	Class II Aldolase and Adducin N-terminal domain
CFK41_RS01425	SM00354	helix_turn _helix lactose operon repressor
CFK41_RS01430	SM00354	helix_turn _helix lactose operon repressor
CFK41_RS01570	SM01007	Class II Aldolase and Adducin N-terminal domain
CFK41_RS01580	SM00354	helix_turn _helix lactose operon repressor
CFK41_RS01590	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS01665	SM00354	helix_turn _helix lactose operon repressor
CFK41_RS01670	SM00813	Alpha-L-arabinofuranosidase C-terminus
CFK41_RS01675	SM00813	Alpha-L-arabinofuranosidase C-terminus
CFK41_RS01685	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CFK41_RS01710	SM00354	helix_turn _helix lactose operon repressor
CFK41_RS01740	SM00710	Parallel beta-helix repeats
CFK41_RS01755	SM00656	CFK41_RS01755
CFK41_RS01755	SM00710	Parallel beta-helix repeats
CFK41_RS01760	SM00656	CFK41_RS01760
CFK41_RS01765	SM00656	CFK41_RS01765
CFK41_RS01780	SM00849	Metallo-beta-lactamase superfamily
CFK41_RS01790	SM00342	helix_turn_helix, arabinose operon control protein
CFK41_RS01815	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CFK41_RS01850	SM00354	helix_turn _helix lactose operon repressor
CFK41_RS01905	SM00729	Elongator protein 3, MiaB family, Radical SAM
CFK41_RS01985	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CFK41_RS01995	SM00226	Low molecular weight phosphatase family
CFK41_RS02010	SM00530	Helix-turn-helix XRE-family like proteins 
CFK41_RS02035	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS02040	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS02060	SM00421	helix_turn_helix, Lux Regulon
CFK41_RS02060	SM00448	cheY-homologous receiver domain
CFK41_RS02065	SM00342	helix_turn_helix, arabinose operon control protein
CFK41_RS02155	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS02165	SM01149	CFK41_RS02165
CFK41_RS02170	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CFK41_RS02170	SM00493	CFK41_RS02170
CFK41_RS02185	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS02205	SM00530	Helix-turn-helix XRE-family like proteins 
CFK41_RS02230	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CFK41_RS02295	SM00421	helix_turn_helix, Lux Regulon
CFK41_RS02325	SM00530	Helix-turn-helix XRE-family like proteins 
CFK41_RS02330	SM00450	Rhodanese Homology Domain
CFK41_RS02330	SM00849	Metallo-beta-lactamase superfamily
CFK41_RS02365	SM00354	helix_turn _helix lactose operon repressor
CFK41_RS02415	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS02430	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS02495	SM00984	UDP binding domain
CFK41_RS02515	SM00448	cheY-homologous receiver domain
CFK41_RS02525	SM00387	Histidine kinase-like ATPases
CFK41_RS02525	SM00388	His Kinase A (phosphoacceptor) domain
CFK41_RS02555	SM00752	Horizontally Transferred TransMembrane Domain
CFK41_RS02635	SM00347	helix_turn_helix multiple antibiotic resistance protein
CFK41_RS02710	SM00460	Transglutaminase/protease-like homologues
CFK41_RS02765	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CFK41_RS02850	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS02855	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS02870	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS02875	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS02880	SM00062	Bacterial periplasmic substrate-binding proteins
CFK41_RS02890	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS02910	SM00563	Phosphate acyltransferases
CFK41_RS02920	SM00855	Phosphoglycerate mutase family
CFK41_RS02950	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CFK41_RS02990	SM00220	Serine/Threonine protein kinases, catalytic domain
CFK41_RS02990	SM00740	CFK41_RS02990
CFK41_RS02995	SM00220	Serine/Threonine protein kinases, catalytic domain
CFK41_RS03010	SM00331	Sigma factor PP2C-like phosphatases
CFK41_RS03010	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CFK41_RS03015	SM00240	Forkhead associated domain
CFK41_RS03020	SM00240	Forkhead associated domain
CFK41_RS03065	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS03095	SM00881	CoA binding domain
CFK41_RS03130	SM00320	WD40 repeats
CFK41_RS03140	SM01004	Delta-aminolevulinic acid dehydratase
CFK41_RS03230	SM01038	Beta galactosidase small chain
CFK41_RS03245	SM00530	Helix-turn-helix XRE-family like proteins 
CFK41_RS03280	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS03315	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS03320	SM00822	CFK41_RS03320
CFK41_RS03400	SM00849	Metallo-beta-lactamase superfamily
CFK41_RS03405	SM00100	Cyclic nucleotide-monophosphate binding domain
CFK41_RS03405	SM00419	helix_turn_helix, cAMP Regulatory protein
CFK41_RS03410	SM00478	endonuclease III
CFK41_RS03410	SM00525	CFK41_RS03410
CFK41_RS03420	SM00357	Cold shock protein domain
CFK41_RS03430	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS03460	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CFK41_RS03460	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CFK41_RS03460	SM00493	CFK41_RS03460
CFK41_RS03465	SM00014	Acid phosphatase homologues
CFK41_RS03475	SM00487	DEAD-like helicases superfamily
CFK41_RS03475	SM00490	helicase superfamily c-terminal domain
CFK41_RS03585	SM00855	Phosphoglycerate mutase family
CFK41_RS03610	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS03615	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS03625	SM00450	Rhodanese Homology Domain
CFK41_RS03635	SM00822	CFK41_RS03635
CFK41_RS03675	SM00387	Histidine kinase-like ATPases
CFK41_RS03675	SM00388	His Kinase A (phosphoacceptor) domain
CFK41_RS03685	SM00567	E-Z type HEAT repeats
CFK41_RS03690	SM00448	cheY-homologous receiver domain
CFK41_RS03710	SM00861	Transketolase, pyrimidine binding domain
CFK41_RS03750	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS03880	SM00421	helix_turn_helix, Lux Regulon
CFK41_RS03880	SM00448	cheY-homologous receiver domain
CFK41_RS03890	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS03915	SM00822	CFK41_RS03915
CFK41_RS03925	SM01060	CFK41_RS03925
CFK41_RS03935	SM00563	Phosphate acyltransferases
CFK41_RS03990	SM00346	helix_turn_helix isocitrate lyase regulation
CFK41_RS04015	SM00823	Phosphopantetheine attachment site
CFK41_RS04080	SM00347	helix_turn_helix multiple antibiotic resistance protein
CFK41_RS04085	SM00829	Enoylreductase
CFK41_RS04135	SM00347	helix_turn_helix multiple antibiotic resistance protein
CFK41_RS04165	SM00421	helix_turn_helix, Lux Regulon
CFK41_RS04165	SM00448	cheY-homologous receiver domain
CFK41_RS04210	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS04265	SM00420	helix_turn_helix, Deoxyribose operon repressor
CFK41_RS04265	SM01134	CFK41_RS04265
CFK41_RS04310	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS04315	SM01155	CFK41_RS04315
CFK41_RS04325	SM00867	YceI-like domain 
CFK41_RS04330	SM00347	helix_turn_helix multiple antibiotic resistance protein
CFK41_RS04335	SM00855	Phosphoglycerate mutase family
CFK41_RS04395	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CFK41_RS04405	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CFK41_RS04430	SM00798	AICARFT/IMPCHase bienzyme
CFK41_RS04430	SM00851	MGS-like domain
CFK41_RS04485	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CFK41_RS04490	SM00649	Ribosomal protein L11/L12
CFK41_RS04520	SM00663	RNA polymerase I subunit A N-terminus
CFK41_RS04525	SM01208	CFK41_RS04525
CFK41_RS04540	SM00838	Elongation factor G C-terminus
CFK41_RS04540	SM00889	Elongation factor G, domain IV
CFK41_RS04570	SM01403	CFK41_RS04570
CFK41_RS04590	SM01382	CFK41_RS04590
CFK41_RS04590	SM01383	CFK41_RS04590
CFK41_RS04605	SM00322	K homology RNA-binding domain
CFK41_RS04635	SM01374	CFK41_RS04635
CFK41_RS04700	SM00316	Ribosomal protein S1-like RNA-binding domain
CFK41_RS04720	SM00662	RNA polymerases D
CFK41_RS04730	SM00644	CFK41_RS04730
CFK41_RS04730	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
CFK41_RS04735	SM00644	CFK41_RS04735
CFK41_RS04735	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
CFK41_RS04760	SM01133	CFK41_RS04760
CFK41_RS04790	SM00822	CFK41_RS04790
CFK41_RS04810	SM00422	helix_turn_helix, mercury resistance
CFK41_RS04835	SM01211	CFK41_RS04835
CFK41_RS04845	SM00849	Metallo-beta-lactamase superfamily
CFK41_RS04860	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS04870	SM01209	CFK41_RS04870
CFK41_RS04870	SM01210	CFK41_RS04870
CFK41_RS04895	SM00487	DEAD-like helicases superfamily
CFK41_RS04895	SM00490	helicase superfamily c-terminal domain
CFK41_RS04925	SM01005	Alanine racemase, C-terminal domain
CFK41_RS04950	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS04990	SM00670	Large family of predicted nucleotide-binding domains
CFK41_RS05040	SM00327	von Willebrand factor (vWF) type A domain
CFK41_RS05085	SM00530	Helix-turn-helix XRE-family like proteins 
CFK41_RS05120	SM00530	Helix-turn-helix XRE-family like proteins 
CFK41_RS05150	SM00422	helix_turn_helix, mercury resistance
CFK41_RS05160	SM00903	Flavin reductase like domain
CFK41_RS05185	SM00855	Phosphoglycerate mutase family
CFK41_RS05190	SM00450	Rhodanese Homology Domain
CFK41_RS05195	SM00530	Helix-turn-helix XRE-family like proteins 
CFK41_RS05280	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS05285	SM00062	Bacterial periplasmic substrate-binding proteins
CFK41_RS05300	SM00014	Acid phosphatase homologues
CFK41_RS05310	SM00563	Phosphate acyltransferases
CFK41_RS05340	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS05345	SM00903	Flavin reductase like domain
CFK41_RS05350	SM00829	Enoylreductase
CFK41_RS05445	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS05465	SM00986	Uracil DNA glycosylase superfamily
CFK41_RS05465	SM00987	UreE urease accessory protein, C-terminal domain 
CFK41_RS05500	SM00420	helix_turn_helix, Deoxyribose operon repressor
CFK41_RS05500	SM01134	CFK41_RS05500
CFK41_RS05605	SM00354	helix_turn _helix lactose operon repressor
CFK41_RS05700	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CFK41_RS05720	SM00849	Metallo-beta-lactamase superfamily
CFK41_RS05735	SM00873	B3/4 domain
CFK41_RS05735	SM00874	tRNA synthetase B5 domain
CFK41_RS05735	SM00896	Ferredoxin-fold anticodon binding domain
CFK41_RS05760	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS05765	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS05785	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CFK41_RS05850	SM00060	Fibronectin type 3 domain
CFK41_RS05865	SM00460	Transglutaminase/protease-like homologues
CFK41_RS05870	SM00240	Forkhead associated domain
CFK41_RS05875	SM00331	Sigma factor PP2C-like phosphatases
CFK41_RS05875	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CFK41_RS05885	SM00220	Serine/Threonine protein kinases, catalytic domain
CFK41_RS05895	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS06025	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS06045	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
CFK41_RS06060	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CFK41_RS06060	SM00895	CFK41_RS06060
CFK41_RS06070	SM01133	CFK41_RS06070
CFK41_RS06095	SM00878	Biotin carboxylase C-terminal domain
CFK41_RS06125	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CFK41_RS06130	SM00448	cheY-homologous receiver domain
CFK41_RS06130	SM00862	Transcriptional regulatory protein, C terminal
CFK41_RS06135	SM00387	Histidine kinase-like ATPases
CFK41_RS06135	SM00388	His Kinase A (phosphoacceptor) domain
CFK41_RS06145	SM01001	AIR carboxylase
CFK41_RS06150	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS06175	SM00858	CFK41_RS06175
CFK41_RS06245	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS06335	SM00448	cheY-homologous receiver domain
CFK41_RS06335	SM00862	Transcriptional regulatory protein, C terminal
CFK41_RS06340	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CFK41_RS06340	SM00387	Histidine kinase-like ATPases
CFK41_RS06340	SM00388	His Kinase A (phosphoacceptor) domain
CFK41_RS06365	SM00957	SecA DEAD-like domain
CFK41_RS06365	SM00958	SecA preprotein cross-linking domain
CFK41_RS06390	SM00858	CFK41_RS06390
CFK41_RS06410	SM00387	Histidine kinase-like ATPases
CFK41_RS06410	SM00911	HWE histidine kinase
CFK41_RS06430	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS06435	SM00421	helix_turn_helix, Lux Regulon
CFK41_RS06435	SM00448	cheY-homologous receiver domain
CFK41_RS06440	SM00387	Histidine kinase-like ATPases
CFK41_RS06470	SM00490	helicase superfamily c-terminal domain
CFK41_RS06490	SM00937	CFK41_RS06490
CFK41_RS06495	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS06535	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS06535	SM00487	DEAD-like helicases superfamily
CFK41_RS06535	SM00490	helicase superfamily c-terminal domain
CFK41_RS06535	SM00847	Helicase associated domain (HA2)  Add an annotation
CFK41_RS06545	SM00919	Malic enzyme, NAD binding domain
CFK41_RS06545	SM01274	CFK41_RS06545
CFK41_RS06570	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS06575	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS06600	SM00487	DEAD-like helicases superfamily
CFK41_RS06645	SM00855	Phosphoglycerate mutase family
CFK41_RS06690	SM00829	Enoylreductase
CFK41_RS06710	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS06750	SM00954	Region found in RelA / SpoT proteins
CFK41_RS06765	SM00346	helix_turn_helix isocitrate lyase regulation
CFK41_RS06800	SM00479	CFK41_RS06800
CFK41_RS06825	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CFK41_RS06825	SM01232	CFK41_RS06825
CFK41_RS06830	SM00487	DEAD-like helicases superfamily
CFK41_RS06830	SM00490	helicase superfamily c-terminal domain
CFK41_RS06915	SM00861	Transketolase, pyrimidine binding domain
CFK41_RS06920	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CFK41_RS06920	SM00387	Histidine kinase-like ATPases
CFK41_RS06920	SM00388	His Kinase A (phosphoacceptor) domain
CFK41_RS06925	SM00448	cheY-homologous receiver domain
CFK41_RS06925	SM00862	Transcriptional regulatory protein, C terminal
CFK41_RS06970	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS06970	SM00959	Rho termination factor, N-terminal domain
CFK41_RS07000	SM00354	helix_turn _helix lactose operon repressor
CFK41_RS07010	SM00937	CFK41_RS07010
CFK41_RS07065	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS07105	SM00642	Alpha-amylase domain
CFK41_RS07110	SM00642	Alpha-amylase domain
CFK41_RS07115	SM00642	Alpha-amylase domain
CFK41_RS07135	SM00327	von Willebrand factor (vWF) type A domain
CFK41_RS07140	SM00327	von Willebrand factor (vWF) type A domain
CFK41_RS07165	SM00292	breast cancer carboxy-terminal domain
CFK41_RS07165	SM00532	Ligase N family
CFK41_RS07175	SM00487	DEAD-like helicases superfamily
CFK41_RS07175	SM00490	helicase superfamily c-terminal domain
CFK41_RS07210	SM00845	GatB domain
CFK41_RS07225	SM01006	Siderophore biosynthesis protein domain
CFK41_RS07250	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
CFK41_RS07255	SM01329	CFK41_RS07255
CFK41_RS07265	SM00917	LeuA allosteric (dimerisation) domain
CFK41_RS07280	SM00487	DEAD-like helicases superfamily
CFK41_RS07280	SM00490	helicase superfamily c-terminal domain
CFK41_RS07350	SM00346	helix_turn_helix isocitrate lyase regulation
CFK41_RS07375	SM00563	Phosphate acyltransferases
CFK41_RS07400	SM00829	Enoylreductase
CFK41_RS07420	SM00487	DEAD-like helicases superfamily
CFK41_RS07420	SM00490	helicase superfamily c-terminal domain
CFK41_RS07450	SM00342	helix_turn_helix, arabinose operon control protein
CFK41_RS07470	SM00358	Double-stranded RNA binding motif
CFK41_RS07470	SM00535	Ribonuclease III family
CFK41_RS07475	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CFK41_RS07475	SM01232	CFK41_RS07475
CFK41_RS07485	SM00421	helix_turn_helix, Lux Regulon
CFK41_RS07485	SM00448	cheY-homologous receiver domain
CFK41_RS07490	SM00387	Histidine kinase-like ATPases
CFK41_RS07495	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS07500	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS07515	SM00316	Ribosomal protein S1-like RNA-binding domain
CFK41_RS07535	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CFK41_RS07565	SM00855	Phosphoglycerate mutase family
CFK41_RS07580	SM00530	Helix-turn-helix XRE-family like proteins 
CFK41_RS07590	SM00347	helix_turn_helix multiple antibiotic resistance protein
CFK41_RS07600	SM00478	endonuclease III
CFK41_RS07605	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS07675	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS07695	SM00341	Helicase and RNase D C-terminal
CFK41_RS07695	SM00487	DEAD-like helicases superfamily
CFK41_RS07695	SM00490	helicase superfamily c-terminal domain
CFK41_RS07695	SM00956	CFK41_RS07695
CFK41_RS07710	SM00640	Glycosyl hydrolases family 32
CFK41_RS07730	SM00354	helix_turn _helix lactose operon repressor
CFK41_RS07735	SM00421	helix_turn_helix, Lux Regulon
CFK41_RS07735	SM00448	cheY-homologous receiver domain
CFK41_RS07815	SM00354	helix_turn _helix lactose operon repressor
CFK41_RS07845	SM00354	helix_turn _helix lactose operon repressor
CFK41_RS07850	SM00354	helix_turn _helix lactose operon repressor
CFK41_RS07870	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS07895	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS07900	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS07915	SM00530	Helix-turn-helix XRE-family like proteins 
CFK41_RS07920	SM00507	HNH nucleases
CFK41_RS08055	SM00756	CFK41_RS08055
CFK41_RS08060	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CFK41_RS08065	SM00849	Metallo-beta-lactamase superfamily
CFK41_RS08100	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CFK41_RS08105	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CFK41_RS08105	SM00895	CFK41_RS08105
CFK41_RS08110	SM00838	Elongation factor G C-terminus
CFK41_RS08120	SM00729	Elongator protein 3, MiaB family, Radical SAM
CFK41_RS08145	SM00271	DnaJ molecular chaperone homology domain
CFK41_RS08155	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS08190	SM00116	Domain in cystathionine beta-synthase and other proteins.
CFK41_RS08190	SM01091	Transporter associated domain
CFK41_RS08200	SM00917	LeuA allosteric (dimerisation) domain
CFK41_RS08270	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS08295	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CFK41_RS08300	SM00400	zinc finger
CFK41_RS08300	SM00493	CFK41_RS08300
CFK41_RS08315	SM00421	helix_turn_helix, Lux Regulon
CFK41_RS08315	SM00448	cheY-homologous receiver domain
CFK41_RS08320	SM00880	CFK41_RS08320
CFK41_RS08335	SM00421	helix_turn_helix, Lux Regulon
CFK41_RS08335	SM00448	cheY-homologous receiver domain
CFK41_RS08350	SM00354	helix_turn _helix lactose operon repressor
CFK41_RS08375	SM00825	Beta-ketoacyl synthase
CFK41_RS08390	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CFK41_RS08475	SM01230	CFK41_RS08475
CFK41_RS08495	SM01230	CFK41_RS08495
CFK41_RS08510	SM00729	Elongator protein 3, MiaB family, Radical SAM
CFK41_RS08555	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS08560	SM00363	S4 RNA-binding domain
CFK41_RS08560	SM01390	CFK41_RS08560
CFK41_RS08565	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CFK41_RS08570	SM00732	Likely ribonuclease with RNase H fold.
CFK41_RS08645	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS08740	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CFK41_RS08745	SM00487	DEAD-like helicases superfamily
CFK41_RS08745	SM00490	helicase superfamily c-terminal domain
CFK41_RS08745	SM01142	CFK41_RS08745
CFK41_RS08795	SM00822	CFK41_RS08795
CFK41_RS08800	SM00855	Phosphoglycerate mutase family
CFK41_RS08825	SM00955	CFK41_RS08825
CFK41_RS08830	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS08850	SM00248	ankyrin repeats
CFK41_RS08865	SM00829	Enoylreductase
CFK41_RS08890	SM00481	DNA polymerase alpha chain like domain
CFK41_RS08910	SM00641	Glycosyl hydrolases family 25
CFK41_RS08950	SM00460	Transglutaminase/protease-like homologues
CFK41_RS08980	SM00422	helix_turn_helix, mercury resistance
CFK41_RS08985	SM00422	helix_turn_helix, mercury resistance
CFK41_RS08990	SM00240	Forkhead associated domain
CFK41_RS09020	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CFK41_RS09040	SM00347	helix_turn_helix multiple antibiotic resistance protein
CFK41_RS09060	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS09100	SM00347	helix_turn_helix multiple antibiotic resistance protein
CFK41_RS09115	SM00421	helix_turn_helix, Lux Regulon
CFK41_RS09115	SM00448	cheY-homologous receiver domain
CFK41_RS09160	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS09170	SM00363	S4 RNA-binding domain
CFK41_RS09190	SM00861	Transketolase, pyrimidine binding domain
CFK41_RS09225	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CFK41_RS09245	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CFK41_RS09245	SM00465	GIY-YIG type nucleases (URI domain)
CFK41_RS09255	SM00849	Metallo-beta-lactamase superfamily
CFK41_RS09260	SM00482	DNA polymerase A domain
CFK41_RS09290	SM00487	DEAD-like helicases superfamily
CFK41_RS09290	SM00490	helicase superfamily c-terminal domain
CFK41_RS09330	SM00812	Alpha-L-fucosidase
CFK41_RS09340	SM00316	Ribosomal protein S1-like RNA-binding domain
CFK41_RS09345	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CFK41_RS09345	SM00475	5'-3' exonuclease
CFK41_RS09345	SM00482	DNA polymerase A domain
CFK41_RS09360	SM00448	cheY-homologous receiver domain
CFK41_RS09360	SM01012	CFK41_RS09360
CFK41_RS09405	SM01060	CFK41_RS09405
CFK41_RS09420	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
CFK41_RS09500	SM01409	CFK41_RS09500
CFK41_RS09505	SM00072	Guanylate kinase homologues.
CFK41_RS09515	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CFK41_RS09520	SM00851	MGS-like domain
CFK41_RS09520	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CFK41_RS09525	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CFK41_RS09555	SM00841	Elongation factor P, C-terminal
CFK41_RS09555	SM01185	CFK41_RS09555
CFK41_RS09565	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS09570	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CFK41_RS09570	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CFK41_RS09580	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS09630	SM00861	Transketolase, pyrimidine binding domain
CFK41_RS09650	SM00421	helix_turn_helix, Lux Regulon
CFK41_RS09650	SM00448	cheY-homologous receiver domain
CFK41_RS09655	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CFK41_RS09660	SM00829	Enoylreductase
CFK41_RS09715	SM00881	CoA binding domain
CFK41_RS09720	SM00434	DNA Topoisomerase IV
CFK41_RS09750	SM00387	Histidine kinase-like ATPases
CFK41_RS09750	SM00433	TopoisomeraseII
CFK41_RS09795	SM00220	Serine/Threonine protein kinases, catalytic domain
CFK41_RS09795	SM00740	CFK41_RS09795
CFK41_RS09805	SM00563	Phosphate acyltransferases
CFK41_RS09830	SM00465	GIY-YIG type nucleases (URI domain)
CFK41_RS09830	SM00479	CFK41_RS09830
CFK41_RS09910	SM00487	DEAD-like helicases superfamily
CFK41_RS09910	SM00490	helicase superfamily c-terminal domain
CFK41_RS09935	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CFK41_RS09935	SM00954	Region found in RelA / SpoT proteins
CFK41_RS09955	SM01323	CFK41_RS09955
CFK41_RS09960	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS09965	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CFK41_RS09990	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CFK41_RS10035	SM00642	Alpha-amylase domain
CFK41_RS10040	SM00642	Alpha-amylase domain
CFK41_RS10045	SM00642	Alpha-amylase domain
CFK41_RS10070	SM00474	3'-5' exonuclease
CFK41_RS10120	SM00363	S4 RNA-binding domain
CFK41_RS10160	SM00347	helix_turn_helix multiple antibiotic resistance protein
CFK41_RS10195	SM01192	CFK41_RS10195
CFK41_RS10195	SM01193	CFK41_RS10195
CFK41_RS10205	SM00487	DEAD-like helicases superfamily
CFK41_RS10205	SM00490	helicase superfamily c-terminal domain
CFK41_RS10205	SM00982	CFK41_RS10205
CFK41_RS10205	SM01058	CarD-like/TRCF domain
CFK41_RS10220	SM01400	CFK41_RS10220
CFK41_RS10240	SM00347	helix_turn_helix multiple antibiotic resistance protein
CFK41_RS10245	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS10260	SM00650	Ribosomal RNA adenine dimethylases
CFK41_RS10320	SM00530	Helix-turn-helix XRE-family like proteins 
CFK41_RS10370	SM00834	Putative regulatory protein
CFK41_RS10375	SM00858	CFK41_RS10375
CFK41_RS10385	SM00478	endonuclease III
CFK41_RS10385	SM00525	CFK41_RS10385
CFK41_RS10400	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS10400	SM01086	C-terminal, D2-small domain, of ClpB protein
CFK41_RS10490	SM00905	Dihydroneopterin aldolase
CFK41_RS10505	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS10540	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS10555	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CFK41_RS10560	SM00840	CFK41_RS10560
CFK41_RS10580	SM00421	helix_turn_helix, Lux Regulon
CFK41_RS10580	SM00448	cheY-homologous receiver domain
CFK41_RS10625	SM00487	DEAD-like helicases superfamily
CFK41_RS10625	SM00490	helicase superfamily c-terminal domain
CFK41_RS10670	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS10670	SM01086	C-terminal, D2-small domain, of ClpB protein
CFK41_RS10680	SM00363	S4 RNA-binding domain
CFK41_RS10690	SM00226	Low molecular weight phosphatase family
CFK41_RS10795	SM00354	helix_turn _helix lactose operon repressor
CFK41_RS10815	SM00642	Alpha-amylase domain
CFK41_RS10850	SM00422	helix_turn_helix, mercury resistance
CFK41_RS10855	SM00271	DnaJ molecular chaperone homology domain
CFK41_RS10890	SM00834	Putative regulatory protein
CFK41_RS10920	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CFK41_RS10920	SM00895	CFK41_RS10920
CFK41_RS10940	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CFK41_RS10940	SM00895	CFK41_RS10940
CFK41_RS10990	SM00387	Histidine kinase-like ATPases
CFK41_RS10995	SM00421	helix_turn_helix, Lux Regulon
CFK41_RS10995	SM00448	cheY-homologous receiver domain
CFK41_RS11000	SM00507	HNH nucleases
CFK41_RS11055	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS11060	SM00248	ankyrin repeats
CFK41_RS11075	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CFK41_RS11075	SM01232	CFK41_RS11075
CFK41_RS11095	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS11105	SM00220	Serine/Threonine protein kinases, catalytic domain
CFK41_RS11110	SM00421	helix_turn_helix, Lux Regulon
CFK41_RS11110	SM00448	cheY-homologous receiver domain
CFK41_RS11115	SM00387	Histidine kinase-like ATPases
CFK41_RS11130	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS11175	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS11185	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CFK41_RS11215	SM00341	Helicase and RNase D C-terminal
CFK41_RS11255	SM00487	DEAD-like helicases superfamily
CFK41_RS11255	SM00490	helicase superfamily c-terminal domain
CFK41_RS11260	SM00481	DNA polymerase alpha chain like domain
CFK41_RS11265	SM01011	Aminopeptidase P, N-terminal domain
CFK41_RS11270	SM00116	Domain in cystathionine beta-synthase and other proteins.
CFK41_RS11270	SM00924	MgtE intracellular N domain
CFK41_RS11370	SM00838	Elongation factor G C-terminus
CFK41_RS11375	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS11425	SM00481	DNA polymerase alpha chain like domain
CFK41_RS11435	SM00872	Alpha mannosidase, middle domain
CFK41_RS11445	SM00363	S4 RNA-binding domain
CFK41_RS11475	SM00864	Tubulin/FtsZ family, GTPase domain
CFK41_RS11475	SM00865	Tubulin/FtsZ family, C-terminal domain
CFK41_RS11565	SM00357	Cold shock protein domain
CFK41_RS11575	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS11595	SM00487	DEAD-like helicases superfamily
CFK41_RS11595	SM00491	CFK41_RS11595
CFK41_RS11625	SM00729	Elongator protein 3, MiaB family, Radical SAM
CFK41_RS11635	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS11645	SM00530	Helix-turn-helix XRE-family like proteins 
CFK41_RS11660	SM00843	CFK41_RS11660
CFK41_RS11665	SM00849	Metallo-beta-lactamase superfamily
CFK41_RS11670	SM01130	CFK41_RS11670
CFK41_RS11710	SM00316	Ribosomal protein S1-like RNA-binding domain
CFK41_RS11710	SM00322	K homology RNA-binding domain
CFK41_RS11715	SM01387	CFK41_RS11715
CFK41_RS11720	SM00904	Riboflavin kinase
CFK41_RS11865	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS11940	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS11940	SM00962	SRP54-type protein, GTPase domain
CFK41_RS11940	SM00963	SRP54-type protein, helical bundle domain
CFK41_RS11945	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CFK41_RS11950	SM00938	Nitrogen regulatory protein P-II
CFK41_RS11965	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS11965	SM00962	SRP54-type protein, GTPase domain
CFK41_RS11965	SM00963	SRP54-type protein, helical bundle domain
CFK41_RS11970	SM00562	CFK41_RS11970
CFK41_RS12020	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS12035	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CFK41_RS12055	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS12125	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CFK41_RS12135	SM00830	Chorismate mutase type II
CFK41_RS12140	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS12140	SM00994	ClpX C4-type zinc finger
CFK41_RS12140	SM01086	C-terminal, D2-small domain, of ClpB protein
CFK41_RS12180	SM00342	helix_turn_helix, arabinose operon control protein
CFK41_RS12180	SM00478	endonuclease III
CFK41_RS12180	SM01009	AlkA N-terminal domain
CFK41_RS12205	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS12210	SM01058	CarD-like/TRCF domain
CFK41_RS12270	SM00387	Histidine kinase-like ATPases
CFK41_RS12270	SM00388	His Kinase A (phosphoacceptor) domain
CFK41_RS12275	SM00448	cheY-homologous receiver domain
CFK41_RS12275	SM00862	Transcriptional regulatory protein, C terminal
CFK41_RS12285	SM01058	CarD-like/TRCF domain
CFK41_RS12325	SM01240	CFK41_RS12325
CFK41_RS12365	SM00529	Helix-turn-helix diphteria tox regulatory element
CFK41_RS12370	SM00881	CoA binding domain
CFK41_RS12455	SM00788	Adenylosuccinate synthetase
CFK41_RS12480	SM00855	Phosphoglycerate mutase family
CFK41_RS12565	SM01240	CFK41_RS12565
CFK41_RS12575	SM00479	CFK41_RS12575
CFK41_RS12590	SM00116	Domain in cystathionine beta-synthase and other proteins.
CFK41_RS12590	SM01240	CFK41_RS12590
CFK41_RS12620	SM00883	Chaperonin 10 Kd subunit
CFK41_RS12640	SM00852	Probable molybdopterin binding domain
CFK41_RS12650	SM00852	Probable molybdopterin binding domain
CFK41_RS12655	SM00729	Elongator protein 3, MiaB family, Radical SAM
CFK41_RS12665	SM00450	Rhodanese Homology Domain
CFK41_RS12680	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS12695	SM00852	Probable molybdopterin binding domain
CFK41_RS12700	SM00829	Enoylreductase
CFK41_RS12760	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CFK41_RS12760	SM00895	CFK41_RS12760
CFK41_RS12775	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS12780	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS12785	SM01130	CFK41_RS12785
CFK41_RS12870	SM00155	Phospholipase D. Active site motifs.
CFK41_RS12915	SM01350	CFK41_RS12915
CFK41_RS12925	SM00487	DEAD-like helicases superfamily
CFK41_RS12925	SM00490	helicase superfamily c-terminal domain
CFK41_RS12935	SM00448	cheY-homologous receiver domain
CFK41_RS12935	SM00862	Transcriptional regulatory protein, C terminal
CFK41_RS12960	SM00507	HNH nucleases
CFK41_RS12970	SM00829	Enoylreductase
CFK41_RS12990	SM00354	helix_turn _helix lactose operon repressor
CFK41_RS12995	SM00487	DEAD-like helicases superfamily
CFK41_RS12995	SM00490	helicase superfamily c-terminal domain
CFK41_RS13000	SM00450	Rhodanese Homology Domain
CFK41_RS13010	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CFK41_RS13050	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS13085	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS13125	SM00986	Uracil DNA glycosylase superfamily
CFK41_RS13125	SM00987	UreE urease accessory protein, C-terminal domain 
CFK41_RS13145	SM00220	Serine/Threonine protein kinases, catalytic domain
CFK41_RS13160	SM00460	Transglutaminase/protease-like homologues
CFK41_RS13170	SM00829	Enoylreductase
CFK41_RS13265	SM00226	Low molecular weight phosphatase family
CFK41_RS13295	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS13310	SM00062	Bacterial periplasmic substrate-binding proteins
CFK41_RS13320	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CFK41_RS13320	SM00895	CFK41_RS13320
CFK41_RS13345	SM00354	helix_turn _helix lactose operon repressor
CFK41_RS13350	SM00829	Enoylreductase
CFK41_RS13385	SM00357	Cold shock protein domain
CFK41_RS13410	SM00530	Helix-turn-helix XRE-family like proteins 
CFK41_RS13455	SM00829	Enoylreductase
CFK41_RS13460	SM00829	Enoylreductase
CFK41_RS13480	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CFK41_RS13515	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CFK41_RS13555	SM00855	Phosphoglycerate mutase family
CFK41_RS13560	SM00344	helix_turn_helix ASNC type
CFK41_RS13585	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS13615	SM00903	Flavin reductase like domain
CFK41_RS13625	SM00836	DALR anticodon binding domain
CFK41_RS13625	SM01016	Arginyl tRNA synthetase N terminal dom
CFK41_RS13660	SM00450	Rhodanese Homology Domain
CFK41_RS13715	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS13725	SM00421	helix_turn_helix, Lux Regulon
CFK41_RS13725	SM00448	cheY-homologous receiver domain
CFK41_RS13740	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS13770	SM00090	RIO-like kinase
CFK41_RS13795	SM00331	Sigma factor PP2C-like phosphatases
CFK41_RS13795	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CFK41_RS13795	SM00422	helix_turn_helix, mercury resistance
CFK41_RS13835	SM00244	prohibitin homologues
CFK41_RS13940	SM00354	helix_turn _helix lactose operon repressor
CFK41_RS13980	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CFK41_RS13985	SM00530	Helix-turn-helix XRE-family like proteins 
CFK41_RS14020	SM00354	helix_turn _helix lactose operon repressor
CFK41_RS14035	SM00421	helix_turn_helix, Lux Regulon
CFK41_RS14035	SM00448	cheY-homologous receiver domain
CFK41_RS14050	SM00387	Histidine kinase-like ATPases
CFK41_RS14055	SM00421	helix_turn_helix, Lux Regulon
CFK41_RS14055	SM00448	cheY-homologous receiver domain
CFK41_RS14080	SM01130	CFK41_RS14080
CFK41_RS14155	SM01130	CFK41_RS14155
CFK41_RS14160	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CFK41_RS14185	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CFK41_RS14185	SM00895	CFK41_RS14185
CFK41_RS14265	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CFK41_RS14265	SM00895	CFK41_RS14265
CFK41_RS14285	SM00812	Alpha-L-fucosidase
CFK41_RS14290	SM00354	helix_turn _helix lactose operon repressor
CFK41_RS14350	SM00420	helix_turn_helix, Deoxyribose operon repressor
CFK41_RS14450	SM00858	CFK41_RS14450
CFK41_RS14460	SM01007	Class II Aldolase and Adducin N-terminal domain
CFK41_RS14465	SM00420	helix_turn_helix, Deoxyribose operon repressor
CFK41_RS14465	SM01134	CFK41_RS14465
CFK41_RS14520	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS14525	SM00530	Helix-turn-helix XRE-family like proteins 
CFK41_RS14530	SM00822	CFK41_RS14530
CFK41_RS14540	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CFK41_RS14540	SM00895	CFK41_RS14540
CFK41_RS14550	SM01130	CFK41_RS14550
CFK41_RS14555	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CFK41_RS14575	SM01119	CFK41_RS14575
CFK41_RS14610	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS14610	SM00479	CFK41_RS14610
CFK41_RS14645	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CFK41_RS14645	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CFK41_RS14655	SM00813	Alpha-L-arabinofuranosidase C-terminus
CFK41_RS14670	SM01130	CFK41_RS14670
CFK41_RS14695	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CFK41_RS14695	SM00895	CFK41_RS14695
CFK41_RS14705	SM00354	helix_turn _helix lactose operon repressor
CFK41_RS14750	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CFK41_RS14750	SM00895	CFK41_RS14750
CFK41_RS14770	SM00342	helix_turn_helix, arabinose operon control protein
CFK41_RS14785	SM00487	DEAD-like helicases superfamily
CFK41_RS14805	SM00812	Alpha-L-fucosidase
CFK41_RS14825	SM01119	CFK41_RS14825
CFK41_RS14890	SM00347	helix_turn_helix multiple antibiotic resistance protein
CFK41_RS14965	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS14985	SM00342	helix_turn_helix, arabinose operon control protein
CFK41_RS15020	SM00530	Helix-turn-helix XRE-family like proteins 
CFK41_RS15035	SM00530	Helix-turn-helix XRE-family like proteins 
CFK41_RS15040	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CFK41_RS15125	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS15130	SM00093	SERine  Proteinase INhibitors
CFK41_RS15200	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CFK41_RS15215	SM00354	helix_turn _helix lactose operon repressor
CFK41_RS15270	SM00861	Transketolase, pyrimidine binding domain
CFK41_RS15315	SM00422	helix_turn_helix, mercury resistance
CFK41_RS15380	SM01353	CFK41_RS15380
CFK41_RS15420	SM00422	helix_turn_helix, mercury resistance
CFK41_RS15440	SM00487	DEAD-like helicases superfamily
CFK41_RS15440	SM00490	helicase superfamily c-terminal domain
CFK41_RS15440	SM00847	Helicase associated domain (HA2)  Add an annotation
CFK41_RS15465	SM00870	CFK41_RS15465
CFK41_RS15485	SM00450	Rhodanese Homology Domain
CFK41_RS15550	SM00822	CFK41_RS15550
CFK41_RS15565	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS15580	SM00421	helix_turn_helix, Lux Regulon
CFK41_RS15580	SM00448	cheY-homologous receiver domain
CFK41_RS15595	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS15620	SM00862	Transcriptional regulatory protein, C terminal
CFK41_RS15635	SM00487	DEAD-like helicases superfamily
CFK41_RS15635	SM00490	helicase superfamily c-terminal domain
CFK41_RS15650	SM00220	Serine/Threonine protein kinases, catalytic domain
CFK41_RS15685	SM00507	HNH nucleases
CFK41_RS15760	SM00448	cheY-homologous receiver domain
CFK41_RS15760	SM00862	Transcriptional regulatory protein, C terminal
CFK41_RS15765	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CFK41_RS15765	SM00387	Histidine kinase-like ATPases
CFK41_RS15765	SM00388	His Kinase A (phosphoacceptor) domain
CFK41_RS15885	SM00752	Horizontally Transferred TransMembrane Domain
CFK41_RS15930	SM00116	Domain in cystathionine beta-synthase and other proteins.
CFK41_RS15930	SM01091	Transporter associated domain
CFK41_RS15945	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS15975	SM00354	helix_turn _helix lactose operon repressor
CFK41_RS16005	SM00421	helix_turn_helix, Lux Regulon
CFK41_RS16005	SM00448	cheY-homologous receiver domain
CFK41_RS16035	SM00318	Staphylococcal nuclease homologues
CFK41_RS16060	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CFK41_RS16085	SM00062	Bacterial periplasmic substrate-binding proteins
CFK41_RS16090	SM00062	Bacterial periplasmic substrate-binding proteins
CFK41_RS16130	SM00642	Alpha-amylase domain
CFK41_RS16140	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS16145	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS16205	SM00984	UDP binding domain
CFK41_RS16275	SM00354	helix_turn _helix lactose operon repressor
CFK41_RS16295	SM01217	CFK41_RS16295
CFK41_RS16310	SM01217	CFK41_RS16310
CFK41_RS16390	SM00354	helix_turn _helix lactose operon repressor
CFK41_RS16420	SM00633	Glycosyl hydrolase family 10
CFK41_RS16445	SM00633	Glycosyl hydrolase family 10
CFK41_RS16450	SM01217	CFK41_RS16450
CFK41_RS16510	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CFK41_RS16510	SM00895	CFK41_RS16510
CFK41_RS16515	SM00822	CFK41_RS16515
CFK41_RS16530	SM00116	Domain in cystathionine beta-synthase and other proteins.
CFK41_RS16530	SM00924	MgtE intracellular N domain
CFK41_RS16540	SM00829	Enoylreductase
CFK41_RS16555	SM00347	helix_turn_helix multiple antibiotic resistance protein
CFK41_RS16570	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CFK41_RS16580	SM00346	helix_turn_helix isocitrate lyase regulation
CFK41_RS16625	SM01120	CFK41_RS16625
CFK41_RS16640	SM00855	Phosphoglycerate mutase family
CFK41_RS16655	SM00812	Alpha-L-fucosidase
CFK41_RS16735	SM00487	DEAD-like helicases superfamily
CFK41_RS16735	SM00490	helicase superfamily c-terminal domain
CFK41_RS16750	SM00422	helix_turn_helix, mercury resistance
CFK41_RS16780	SM00422	helix_turn_helix, mercury resistance
CFK41_RS16785	SM00422	helix_turn_helix, mercury resistance
CFK41_RS16795	SM00894	Excalibur calcium-binding domain
CFK41_RS16870	SM00420	helix_turn_helix, Deoxyribose operon repressor
CFK41_RS16870	SM01134	CFK41_RS16870
CFK41_RS16885	SM00812	Alpha-L-fucosidase
CFK41_RS16900	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CFK41_RS16900	SM00866	CFK41_RS16900
CFK41_RS16960	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS16990	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CFK41_RS16990	SM00895	CFK41_RS16990
CFK41_RS17010	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CFK41_RS17030	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CFK41_RS17030	SM00895	CFK41_RS17030
CFK41_RS17060	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CFK41_RS17065	SM00829	Enoylreductase
CFK41_RS17075	SM00822	CFK41_RS17075
CFK41_RS17130	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CFK41_RS17130	SM00895	CFK41_RS17130
CFK41_RS17150	SM01120	CFK41_RS17150
CFK41_RS17180	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CFK41_RS17180	SM00895	CFK41_RS17180
CFK41_RS17200	SM00861	Transketolase, pyrimidine binding domain
CFK41_RS17210	SM00895	CFK41_RS17210
CFK41_RS17215	SM00822	CFK41_RS17215
CFK41_RS17240	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CFK41_RS17275	SM00421	helix_turn_helix, Lux Regulon
CFK41_RS17275	SM00448	cheY-homologous receiver domain
CFK41_RS17280	SM00387	Histidine kinase-like ATPases
CFK41_RS17290	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS17305	SM00422	helix_turn_helix, mercury resistance
CFK41_RS17315	SM00422	helix_turn_helix, mercury resistance
CFK41_RS17330	SM00344	helix_turn_helix ASNC type
CFK41_RS17385	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
CFK41_RS17430	SM00434	DNA Topoisomerase IV
CFK41_RS17435	SM00387	Histidine kinase-like ATPases
CFK41_RS17435	SM00433	TopoisomeraseII
CFK41_RS17470	SM00480	DNA polymerase III beta subunit
CFK41_RS17475	SM00382	ATPases associated with a variety of cellular activities
CFK41_RS17475	SM00760	Bacterial dnaA protein helix-turn-helix domain
CFK41_RS17490	SM01234	CFK41_RS17490
CFK41_RS17500	SM00393	Putative single-stranded nucleic acids-binding domain
CFK41_RS17515	SM00470	ParB-like nuclease domain
CFK41_RS17550	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CFK41_RS17585	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CFK41_RS17610	SM00422	helix_turn_helix, mercury resistance
