locus strain_id interpro function go others B2904_RS00005 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003594 Histidine kinase-like ATPase, C-terminal domain G3DSA:3.30.565.10 B2904_RS00010 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000792|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00196|PR00038|PS00622|SM00421|SSF46894 B2904_RS00015 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 SSF101498 B2904_RS00020 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000878|IPR008189|IPR014776|IPR014777|IPR018063 SAM-dependent methyltransferase RsmI, conserved site|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2|rRNA small subunit methyltransferase I GO:0008152|GO:0008168 G3DSA:3.30.950.10|G3DSA:3.40.1010.10|MF_01877|PF00590|PIRSF005917|PS01296|PTHR21091|PTHR21091:SF18|SSF53790|TIGR00096 B2904_RS00025 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 B2904_RS00030 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011335 Restriction endonuclease type II-like PF12705|SSF52980 B2904_RS00035 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002110|IPR020683 Ankyrin repeat|Ankyrin repeat-containing domain GO:0005515 G3DSA:1.25.40.20|PF00023|PF12796|PF13606|PR01415|PTHR24198|SM00248|SSF48403 B2904_RS00040 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003783 Regulatory protein RecX GO:0006282 PF02631|PTHR33602 B2904_RS00045 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 G3DSA:1.10.3860.10|PF00375|PR00173|PTHR11958|PTHR11958:SF5|SSF118215 B2904_RS00050 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001763|IPR003735 Metal-sensitive transcriptional repressor|Rhodanese-like domain GO:0003677|GO:0006355|GO:0046872 G3DSA:3.40.250.10|PF00581|PF02583|PTHR33677|PTHR33677:SF3|SM00450|SSF52821 B2904_RS00055 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002516 Glycosyl transferase, family 11 GO:0005975|GO:0008107|GO:0016020 PF01531|PTHR11927 B2904_RS00060 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR029044 Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|SSF53448 B2904_RS00065 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR029044 Nucleotide-diphospho-sugar transferases SSF53448 B2904_RS00075 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002318|IPR003156|IPR009000|IPR012947|IPR018162|IPR018163|IPR018164|IPR023033 Alanine-tRNA ligase, class IIc|Alanine-tRNA ligase, class IIc, anti-codon-binding domain|Alanine-tRNA ligase, eukaryota/bacteria|Alanyl-tRNA synthetase, class IIc, N-terminal|DHHA1 domain|Threonyl/alanyl tRNA synthetase, SAD|Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain|Translation protein, beta-barrel domain GO:0000166|GO:0003676|GO:0004813|GO:0005524|GO:0005737|GO:0006419|GO:0016876|GO:0043039 G3DSA:3.30.930.10|MF_00036_B|PF01411|PF02272|PF07973|PR00980|PTHR11777|PTHR11777:SF9|SM00863|SSF101353|SSF50447|SSF55186|SSF55681|TIGR00344 B2904_RS00080 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011989|IPR016024 Armadillo-like helical|Armadillo-type fold GO:0005488 G3DSA:1.25.10.10|PF13646|SSF48371 B2904_RS00095 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000291|IPR005905|IPR011095|IPR011127|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|D-alanine--D-alanine ligase|D-alanine--D-alanine ligase, C-terminal|D-alanine--D-alanine ligase, N-terminal domain|D-alanine--D-alanine ligase/VANA/B/C, conserved site|Pre-ATP-grasp domain GO:0003824|GO:0005524|GO:0005737|GO:0008716 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|MF_00047|PF01820|PF07478|PS00843|PTHR23132|SSF52440|SSF56059|TIGR01205 B2904_RS00100 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002481|IPR011991 Ferric-uptake regulator|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01475|PTHR33202|PTHR33202:SF7|SSF46785 B2904_RS00105 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000672|IPR016040|IPR020630|IPR020631 NAD(P)-binding domain|Tetrahydrofolate dehydrogenase/cyclohydrolase|Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain|Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 G3DSA:3.40.192.10|G3DSA:3.40.50.720|MF_01576|PF00763|PF02882|PR00085|PTHR10025|PTHR10025:SF5|SSF51735|SSF53223 B2904_RS00110 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007300 CidB/LrgB family PF04172|PTHR30249|PTHR30249:SF5 B2904_RS00115 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005538 LrgA/CidA family GO:0016021 PF03788|PTHR33931 B2904_RS00120 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR024294 Protein of unknown function DUF3810 PF12725 B2904_RS00125 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002052|IPR004398|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|RNA methyltransferase, RsmD|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0008168|GO:0031167|GO:0032259 G3DSA:3.40.50.150|PF03602|PIRSF004553|PS00092|PTHR18895|PTHR18895:SF60|SSF53335|TIGR00095 B2904_RS00135 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007607 Protein of unknown function DUF583 PF04519|PTHR35024 B2904_RS00145 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SSF48452 B2904_RS00150 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR008391|IPR029058 Acetyl xylan esterase|Alpha/Beta hydrolase fold G3DSA:3.40.50.1820|PF05448|PTHR40111|PTHR40111:SF1|SSF53474 B2904_RS00155 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000212|IPR013986|IPR014016|IPR014017|IPR027417 DExx box DNA helicase domain|DNA helicase, UvrD/REP type|P-loop containing nucleoside triphosphate hydrolase|UvrD-like DNA helicase, C-terminal|UvrD-like Helicase, ATP-binding domain GO:0003677|GO:0004003|GO:0005524|GO:0016787 G3DSA:1.10.10.160|G3DSA:1.10.486.10|G3DSA:3.40.50.300|PF00580|PF13361|PTHR11070|PTHR11070:SF7|SSF52540 B2904_RS00160 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006683|IPR029069 HotDog domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|PTHR12418|PTHR12418:SF16|SSF54637 B2904_RS00165 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR22916|PTHR22916:SF24|SSF53448 B2904_RS00170 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR22916|PTHR22916:SF21|SSF53448 B2904_RS00185 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR027369 DinB/YfiT-like putative metal-dependent hydrolase G3DSA:1.20.120.450 B2904_RS00190 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000587|IPR000994|IPR028980|IPR029149 Creatinase, N-terminal|Creatinase/Aminopeptidase P, N-terminal|Creatinase/Aminopeptidase P/Spt16, N-terminal|Peptidase M24, structural domain GO:0016787 G3DSA:3.40.350.10|G3DSA:3.90.230.10|PF00557|PF01321|PTHR10804|SSF53092|SSF55920 B2904_RS00195 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 PF03806|PTHR30282|PTHR30282:SF0 B2904_RS00200 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF0|SSF82693|SSF82714|SSF82866 B2904_RS00205 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF13533|PF16576|PTHR30469|SSF111369|TIGR01730 B2904_RS00210 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 G3DSA:1.20.1600.10|PF02321|PTHR30026|PTHR30026:SF7|SSF56954 B2904_RS00215 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR021533 Putative beta-lactamase-inhibitor-like, PepSY-like PF11396|SSF160574 B2904_RS00220 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR021533 Putative beta-lactamase-inhibitor-like, PepSY-like PF11396|SSF160574 B2904_RS00225 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006043|IPR026033|IPR029940 AzgA purine transporter|Purine permease PbuG-like|Xanthine/uracil/vitamin C permease GO:0005215|GO:0005345|GO:0006810|GO:0006863|GO:0016020|GO:0055085 PF00860|PIRSF005353|PTHR11119|PTHR11119:SF9 B2904_RS00245 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 PF05681|PTHR30389|PTHR30389:SF4|TIGR00722 B2904_RS00250 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 G3DSA:3.20.130.10|PF05683|PTHR30389|SSF117457|TIGR00723 B2904_RS00255 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PF01235|PR00175|PTHR30330|PTHR30330:SF3|TIGR00835 B2904_RS00260 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000821|IPR001608|IPR009006|IPR011079|IPR029066 Alanine racemase|Alanine racemase, C-terminal|Alanine racemase, N-terminal|Alanine racemase/group IV decarboxylase, C-terminal|PLP-binding barrel GO:0003824|GO:0006522|GO:0008784 G3DSA:2.40.37.10|G3DSA:3.20.20.10|MF_01201|PF00842|PF01168|PR00992|PTHR30511|PTHR30511:SF0|SM01005|SSF50621|SSF51419|TIGR00492 B2904_RS00265 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 G3DSA:1.10.287.950|PF00015|PTHR32089|SM00283|SSF58104 B2904_RS00270 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001444|IPR010930|IPR012836|IPR020013 Fagellar hook-basal body protein, FlgE/F/G|Flagellar basal body rod protein, N-terminal|Flagellar basal-body rod FlgF|Flagellar basal-body/hook protein, C-terminal domain GO:0030694|GO:0071973 PF00460|PF06429|PTHR30435|PTHR30435:SF16|SSF117143|TIGR02490|TIGR03506 B2904_RS00275 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001986|IPR005750|IPR013792 Enolpyruvate transferase domain|RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta|UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0003824|GO:0008760|GO:0016765|GO:0019277 G3DSA:3.65.10.10|MF_00111|PF00275|PTHR21090|SSF55205|TIGR01072 B2904_RS00285 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005215|IPR008880|IPR008881|IPR027304 Trigger factor|Trigger factor, C-terminal|Trigger factor, ribosome-binding, bacterial|Trigger factor/SurA domain GO:0006457|GO:0015031 G3DSA:1.10.3120.10|G3DSA:3.30.70.1050|PF05697|PF05698|PIRSF003095|SSF102735|SSF109998 B2904_RS00290 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001907|IPR018215|IPR023562|IPR029045 ATP-dependent Clp protease proteolytic subunit|Clp protease proteolytic subunit /Translocation-enhancing protein TepA|ClpP, Ser active site|ClpP/crotonase-like domain GO:0004252|GO:0006508 G3DSA:3.90.226.10|MF_00444|PF00574|PR00127|PS00381|PTHR10381|SSF52096|TIGR00493 B2904_RS00295 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004360|IPR018146|IPR029068 Glyoxalase I, conserved site|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain GO:0004462|GO:0046872 G3DSA:3.10.180.10|PF00903|PS00934|PTHR21366|SSF54593 B2904_RS00300 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 B2904_RS00305 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003714|IPR027417 P-loop containing nucleoside triphosphate hydrolase|PhoH-like protein GO:0005524 G3DSA:3.40.50.300|PF02562|PTHR30473|PTHR30473:SF1|SSF52540 B2904_RS00310 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003607|IPR006674|IPR006675|IPR011621|IPR011624 HD domain|HD/PDEase domain|HDIG domain|Metal-dependent phosphohydrolase, 7TM extracellular domain|Metal-dependent phosphohydrolase, 7TM intracellular domain G3DSA:1.10.3210.10|PF01966|PF07697|PF07698|PTHR36442|SM00471|SSF109604|TIGR00277 B2904_RS00315 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002036|IPR023091 Endoribonuclease YbeY|Metalloprotease catalytic domain, predicted GO:0004222|GO:0006364 G3DSA:3.40.390.30|MF_00009|PF02130|SSF55486|TIGR00043 B2904_RS00320 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000644|IPR005170|IPR016166|IPR016169 CBS domain|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD-binding, type 2|Transporter-associated domain GO:0003824|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.10.580.10|G3DSA:3.30.465.10|PF00571|PF03471|PTHR22777|SM00116|SM01091|SSF54631|SSF56176 B2904_RS00325 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000836|IPR005854|IPR017932|IPR029055|IPR029057 Amidophosphoribosyltransferase|Glutamine amidotransferase type 2 domain|Nucleophile aminohydrolases, N-terminal|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0004044|GO:0009113|GO:0009116 G3DSA:3.40.50.2020|G3DSA:3.60.20.10|MF_01931|PF00156|PF13537|PIRSF000485|PTHR11907|PTHR11907:SF0|SSF53271|SSF56235|TIGR01134 B2904_RS00330 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003959|IPR027417 ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF13304|SSF52540 B2904_RS00345 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000897|IPR003593|IPR004125|IPR004780|IPR013822|IPR027417 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase|Signal recognition particle protein Ffh|Signal recognition particle, SRP54 subunit, GTPase domain|Signal recognition particle, SRP54 subunit, M-domain|Signal recognition particle, SRP54 subunit, helical bundle GO:0003924|GO:0005525|GO:0006614|GO:0008312|GO:0048500 G3DSA:1.10.260.30|G3DSA:1.20.120.140|G3DSA:3.40.50.300|PF00448|PF02881|PF02978|PTHR11564|PTHR11564:SF7|SM00382|SM00962|SM00963|SSF47364|SSF47446|SSF52540 B2904_RS00350 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000307|IPR020592|IPR023803 Ribosomal protein S16|Ribosomal protein S16 domain|Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.1320.10|MF_00385|PF00886|PS00732|PTHR12919|SSF54565|TIGR00002 B2904_RS00355 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR009019|IPR020627 K homology domain, prokaryotic type|Uncharacterised protein family UPF0109 GO:0003723 G3DSA:3.30.300.120|MF_00088|PF13083|PTHR34654|SSF54814 B2904_RS00365 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001353|IPR022281|IPR029055 ATP-dependent protease, HslV subunit|Nucleophile aminohydrolases, N-terminal|Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0006508|GO:0009376|GO:0051603 G3DSA:3.60.20.10|MF_00248|PF00227|PIRSF039093|PTHR32194|SSF56235|TIGR03692 B2904_RS00375 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR012312|IPR012827|IPR016131 Haemerythrin, iron-binding site|Haemerythrin, metal-binding domain|Haemerythrin-like GO:0046872 G3DSA:1.20.120.50|PF01814|PS00550|PTHR37164|SSF47188|TIGR02481 B2904_RS00380 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000523|IPR001208|IPR003593|IPR004482|IPR014721|IPR020568|IPR025158|IPR027417 AAA+ ATPase domain|MCM domain|Magnesium chelatase ChlI domain|Mg chelatase-related protein|Mg chelatase-related protein, C-terminal domain|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0003677|GO:0005524|GO:0006260 G3DSA:3.30.230.10|G3DSA:3.40.50.300|PF01078|PF13335|PF13541|PR01657|PTHR32039|PTHR32039:SF7|SM00382|SSF52540|SSF54211|TIGR00368 B2904_RS00395 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001320|IPR001638|IPR018313 Ionotropic glutamate receptor|Solute-binding protein family 3/N-terminal domain of MltF|Solute-binding protein family 3, conserved site GO:0004970|GO:0005215|GO:0006810|GO:0016020 G3DSA:3.40.190.10|PF00497|PS01039|PTHR18966|PTHR18966:SF152|SM00062|SM00079|SSF53850 B2904_RS00400 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001638 Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF00497|PTHR18966|PTHR18966:SF152|SM00062|SSF53850 B2904_RS00405 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|PTHR30614|SSF161098|TIGR01726 B2904_RS00410 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030679 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-type amino acid transport system, ATPase component, HisP-type|P-loop containing nucleoside triphosphate hydrolase GO:0003333|GO:0005524|GO:0015424|GO:0016887 G3DSA:3.40.50.300|PF00005|PIRSF039085|PS00211|PTHR24220|PTHR24220:SF447|SM00382|SSF52540 B2904_RS00415 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004808|IPR005135|IPR020847 AP endonuclease 1|AP endonuclease 1, binding site|Endonuclease/exonuclease/phosphatase GO:0003677|GO:0004518|GO:0004519|GO:0005622|GO:0006281 G3DSA:3.60.10.10|PF03372|PS00726|PTHR22748|SSF56219|TIGR00195|TIGR00633 B2904_RS00420 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002645 STAS domain G3DSA:3.30.750.24|PF01740|SSF52091 B2904_RS00425 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003425 CCB3/YggT GO:0016020 PF02325 B2904_RS00430 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006597|IPR011990 Sel1-like repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SM00671|SSF48452|SSF81901 B2904_RS00435 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR015077|IPR023883 Conserved hypothetical protein CHP03980, redox-disulphide|Domain of unknown function DUF1858 G3DSA:1.10.3910.10|PF08984|PTHR39341|SSF140683|TIGR03980 B2904_RS00440 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007809 FlgN-like protein GO:0005515|GO:0044780 PF05130 B2904_RS00445 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004536|IPR010918|IPR016188|IPR023061 AIR synthase-related protein, C-terminal domain|PurM-like, N-terminal domain|Selenophosphate synthetase|Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 G3DSA:3.30.1330.10|G3DSA:3.90.650.10|MF_00625|PF00586|PF02769|PIRSF036407|PTHR10256|SSF55326|SSF56042|TIGR00476 B2904_RS00450 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006095|IPR006096|IPR006097|IPR014362|IPR016040 Glutamate dehydrogenase|Glutamate/phenylalanine/leucine/valine dehydrogenase|Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal|Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain|NAD(P)-binding domain GO:0006520|GO:0016491|GO:0016639|GO:0055114 G3DSA:1.10.285.10|G3DSA:3.40.192.10|G3DSA:3.40.50.720|PF00208|PF02812|PIRSF000185|PR00082|PS00074|PTHR11606|PTHR11606:SF4|SM00839|SSF51735|SSF53223 B2904_RS00455 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|SM00382|SSF52540 B2904_RS00465 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003033|IPR016181|IPR025559 Acyl-CoA N-acyltransferase|Enhanced intracellular survival protein domain|SCP2 sterol-binding domain G3DSA:3.30.1050.10|G3DSA:3.40.630.30|PF13527|PF13530|PTHR37817|PTHR37817:SF1|SSF55718|SSF55729 B2904_RS00470 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000432|IPR005748|IPR007695|IPR007696|IPR007860|IPR007861|IPR016151|IPR027417 DNA mismatch repair protein MutS, C-terminal|DNA mismatch repair protein MutS, N-terminal|DNA mismatch repair protein MutS, clamp|DNA mismatch repair protein MutS, connector domain|DNA mismatch repair protein MutS, core|DNA mismatch repair protein MutS, type 1|DNA mismatch repair protein MutS-like, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006298|GO:0030983 G3DSA:1.10.1420.10|G3DSA:3.30.420.110|G3DSA:3.40.1170.10|G3DSA:3.40.50.300|MF_00096|PF00488|PF01624|PF05188|PF05190|PF05192|PIRSF037677|PS00486|PTHR11361|PTHR11361:SF86|SM00533|SM00534|SSF48334|SSF52540|SSF53150|SSF55271|TIGR01070 B2904_RS00475 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000223|IPR015927|IPR019759|IPR028360 Peptidase S24/S26, beta-ribbon domain|Peptidase S24/S26A/S26B|Peptidase S24/S26A/S26B/S26C|Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 G3DSA:2.10.109.10|PF00717|PR00727|PTHR12383|PTHR12383:SF14|SSF51306|TIGR02227 B2904_RS00480 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13508|SSF55729 B2904_RS00485 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000362|IPR004769|IPR008948|IPR019468|IPR020557|IPR022761|IPR024083 Adenylosuccinate lyase|Adenylosuccinate lyase C-terminal|Fumarase/histidase, N-terminal|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0004018|GO:0009152 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|PF00206|PF10397|PR00145|PR00149|PS00163|PTHR11444|PTHR11444:SF2|SM00998|SSF48557|TIGR00928 B2904_RS00490 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR025328 Domain of unknown function DUF4234 PF14018 B2904_RS00495 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002085|IPR002328|IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|Alcohol dehydrogenase, zinc-type, conserved site|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.90.180.10|PF00107|PF08240|PS00059|PTHR11695|PTHR11695:SF429|SM00829|SSF50129|SSF51735 B2904_RS00500 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003495|IPR011629|IPR012824|IPR027417 CobW/HypB/UreG, nucleotide-binding domain|Cobalamin (vitamin B12) biosynthesis CobW|Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0009236 G3DSA:3.40.50.300|PF02492|PF07683|PTHR13748|PTHR13748:SF10|SSF52540|SSF90002 B2904_RS00505 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000212|IPR014016|IPR014017|IPR027417 DNA helicase, UvrD/REP type|P-loop containing nucleoside triphosphate hydrolase|UvrD-like DNA helicase, C-terminal|UvrD-like Helicase, ATP-binding domain GO:0003677|GO:0004003|GO:0005524|GO:0016787 G3DSA:1.10.486.10|G3DSA:3.40.50.300|PF00580|PF13361|PTHR11070|PTHR11070:SF7|SSF52540 B2904_RS00510 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR010181 CGCAxxGCC motif PF09719|TIGR01909 B2904_RS00515 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004655|IPR013747|IPR013751|IPR016039 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III|3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal|3-oxoacyl-[acyl-carrier-protein] synthase 3|Thiolase-like GO:0003824|GO:0004315|GO:0006633|GO:0008152 G3DSA:3.40.47.10|MF_01815|PF08541|PF08545|PTHR34069|PTHR34069:SF2|SSF53901|TIGR00747 B2904_RS00525 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13489|PTHR10108|PTHR10108:SF739|SSF53335 B2904_RS00530 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13489|PTHR10108|PTHR10108:SF739|SSF53335 B2904_RS00540 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 G3DSA:3.40.50.2000|PF01075|PTHR30160|PTHR30160:SF7|SSF53756 B2904_RS00545 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13489|PTHR10108|PTHR10108:SF739|SSF53335 B2904_RS00550 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150 B2904_RS00560 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005835|IPR013446|IPR029044 Glucose-1-phosphate cytidylyltransferase|Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain GO:0009058|GO:0016779|GO:0047343 G3DSA:3.90.550.10|PF00483|PTHR22572|PTHR22572:SF16|SSF53448|TIGR02623 B2904_RS00565 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR013445|IPR016040 CDP-glucose 4,6-dehydratase|NAD(P)-binding domain G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF16363|PTHR10366|PTHR10366:SF33|SSF51735|TIGR02622 B2904_RS00570 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000888|IPR011051|IPR014710 RmlC-like cupin domain|RmlC-like jelly roll fold|dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 G3DSA:2.60.120.10|PD001462|PF00908|PTHR21047|SSF51182|TIGR01221 B2904_RS00575 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|PTHR10366|SSF51735 B2904_RS00580 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR10859|PTHR10859:SF86|SSF53448 B2904_RS00585 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002937|IPR023753 Amine oxidase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01593|PTHR10742|PTHR10742:SF271|SSF51905 B2904_RS00590 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000705|IPR006204|IPR006206|IPR013750|IPR014721|IPR019539|IPR020568 GHMP kinase N-terminal domain|GHMP kinase, C-terminal domain|Galactokinase|Galactokinase galactose-binding domain|Mevalonate/galactokinase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0004335|GO:0005524|GO:0005737|GO:0006012|GO:0008152|GO:0016301|GO:0016773|GO:0046835 G3DSA:3.30.230.10|G3DSA:3.30.70.890|PF00288|PF10509|PIRSF000530|PR00473|PR00959|PTHR10457|SSF54211|SSF55060 B2904_RS00610 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000673|IPR001789|IPR008248|IPR011006 CheY-like superfamily|Signal transduction response regulator, chemotaxis, CheB|Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase|Signal transduction response regulator, receiver domain GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 G3DSA:3.40.50.180|G3DSA:3.40.50.2300|PF00072|PF01339|PIRSF000876|PTHR24421|PTHR24421:SF16|SM00448|SSF52172|SSF52738 B2904_RS00615 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003010|IPR004563 Apolipoprotein N-acyltransferase|Carbon-nitrogen hydrolase GO:0006807|GO:0016021|GO:0016410|GO:0016810|GO:0042158 G3DSA:3.60.110.10|MF_01148|PF00795|PTHR23088|PTHR23088:SF29|SSF56317|TIGR00546 B2904_RS00620 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004089|IPR004090 Chemotaxis methyl-accepting receptor|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020 G3DSA:1.10.287.950|PF00015|PR00260|PTHR32089|SM00283|SSF58104 B2904_RS00625 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002371|IPR010810|IPR010930 Flagellar basal-body/hook protein, C-terminal domain|Flagellar hook-associated protein 1|Flagellin hook, IN motif GO:0005198|GO:0006928|GO:0009288|GO:0009424|GO:0044780|GO:0044781 PF06429|PF07196|PTHR30033|PTHR30033:SF1|SSF64518|TIGR02492 B2904_RS00630 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002524|IPR027469|IPR027470 Cation efflux protein|Cation efflux protein transmembrane domain|Cation efflux protein, cytoplasmic domain GO:0006812|GO:0008324|GO:0016021|GO:0055085 G3DSA:1.20.1510.10|G3DSA:3.30.70.1350|PF01545|PF16916|PTHR11562|PTHR11562:SF57|SSF160240|SSF161111|TIGR01297 B2904_RS00635 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003358|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 G3DSA:3.40.50.150|MF_01057|PF02390|PTHR23417|PTHR23417:SF14|SSF53335|TIGR00091 B2904_RS00640 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR024445 ISXO2-like transposase domain PF12762|SM01126 B2904_RS00650 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006437 Bacteriophage terminase, large subunit GO:0006323 PF04466 B2904_RS00655 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR024459 Protein of unknown function DUF1073 PF06381 B2904_RS00735 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006949 Baseplate protein J-like PF04865 B2904_RS00775 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SSF47413 B2904_RS00795 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007710|IPR025518 Nucleoside 2-deoxyribosyltransferase|Protein of unknown function DUF4406 GO:0009159|GO:0050144|GO:0070694 G3DSA:3.40.50.1810|PF14359|SSF52309 B2904_RS00840 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003356|IPR029063 DNA methylase, adenine-specific|S-adenosyl-L-methionine-dependent methyltransferase GO:0003677|GO:0006306|GO:0008170 PF02384|SSF53335 B2904_RS00850 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011991 Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF13412|SSF46785 B2904_RS00900 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 G3DSA:3.40.10.10 B2904_RS00910 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR010141|IPR010918|IPR016188|IPR029062 AIR synthase-related protein, C-terminal domain|Class I glutamine amidotransferase-like|Phosphoribosylformylglycinamidine synthase, FGAM|PurM-like, N-terminal domain G3DSA:3.30.1330.10|G3DSA:3.40.50.880|PF02769|PF13507|PTHR10099|PTHR10099:SF1|SM01211|SSF52317|SSF55326|SSF56042|TIGR01857 B2904_RS00915 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PTHR30290|PTHR30290:SF10|SSF53850 B2904_RS00925 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002810|IPR002825|IPR012340|IPR029045 ClpP/crotonase-like domain|NfeD-like, C-terminal domain|Nucleic acid-binding, OB-fold|Peptidase S49, serine-peptidase prokaryotes GO:0016021 G3DSA:2.40.50.140|G3DSA:3.90.226.10|PF01957|PF01972|PTHR33507|PTHR33507:SF1|SSF52096 B2904_RS00930 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011990|IPR021352 Protein of unknown function DUF2971|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF11185|PF12895|SSF48452 B2904_RS00935 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000031|IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE|Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189|GO:0034023 G3DSA:3.40.50.7700|MF_01929|PF00731|PIRSF001338|PTHR23046|SM01001|SSF52255|TIGR01162 B2904_RS00940 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|SSF82693|SSF82714|SSF82866 B2904_RS00945 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR016181|IPR027365 Acyl-CoA N-acyltransferase|GNAT acetyltransferase YdfB-like G3DSA:3.40.630.30|PF12746|SSF55729 B2904_RS00950 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 G3DSA:1.20.1600.10|PF02321|PTHR30203|SSF56954 B2904_RS00955 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001647|IPR009057|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PTHR30328|PTHR30328:SF20|SSF46689 B2904_RS00960 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000843|IPR010982|IPR028082 Lambda repressor-like, DNA-binding domain|Periplasmic binding protein-like I|Transcription regulator HTH, LacI GO:0003677|GO:0003700|GO:0006355 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|PTHR30146|PTHR30146:SF30|SM00354|SSF47413|SSF53822 B2904_RS00965 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290 B2904_RS00970 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004681|IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein GO:0016021 PF06808|PIRSF006066|PTHR33362|PTHR33362:SF2|TIGR00786 B2904_RS00975 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925 B2904_RS00980 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006115|IPR008927|IPR013328|IPR015815|IPR016040|IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain|3-hydroxyisobutyrate dehydrogenase-related|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, NADP-binding|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0004616|GO:0016491|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF03446|PF14833|PIRSF000103|PTHR22981|SSF48179|SSF51735 B2904_RS00985 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR009015|IPR012888|IPR015888 L-fucose isomerase, C-terminal|L-fucose isomerase, N-terminal-1|L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0006004|GO:0008736|GO:0016861 G3DSA:3.40.50.1070|PF02952|PTHR36120|PTHR36120:SF1|SSF53743 B2904_RS00990 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000322|IPR011013|IPR017853|IPR025887 Galactose mutarotase-like domain|Glycoside hydrolase family 31|Glycoside hydrolase family 31, N-terminal domain|Glycoside hydrolase superfamily GO:0003824|GO:0004553|GO:0005975|GO:0030246 PF01055|PF13802|PTHR22762|PTHR22762:SF90|SSF51011|SSF51445|SSF74650 B2904_RS00995 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000994|IPR028980|IPR029149 Creatinase/Aminopeptidase P, N-terminal|Creatinase/Aminopeptidase P/Spt16, N-terminal|Peptidase M24, structural domain G3DSA:3.40.350.10|G3DSA:3.90.230.10|PF00557|SSF53092|SSF55920 B2904_RS01000 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001585|IPR013785 Aldolase-type TIM barrel|Transaldolase/Fructose-6-phosphate aldolase GO:0003824|GO:0005975 G3DSA:3.20.20.70|PF00923|PTHR10683|SSF51569 B2904_RS01005 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PF03480|PTHR33376 B2904_RS01010 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001636|IPR013816|IPR018236|IPR028923 ATP-grasp fold, subdomain 2|Phosphoribosylaminoimidazole-succinocarboxamide synthase|SAICAR synthetase, conserved site|SAICAR synthetase/ADE2, N-terminal GO:0004639|GO:0005524|GO:0006164 G3DSA:3.30.200.20|G3DSA:3.30.470.20|MF_00137|PF01259|PS01057|PTHR11609|PTHR11609:SF2|SSF56104|TIGR00081 B2904_RS01015 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR019657 Late competence development protein ComFB PF10719 B2904_RS01025 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000819|IPR011356|IPR023042 Peptidase M17, leucine aminopeptidase|Peptidase M17, leucine aminopeptidase/peptidase B|Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0005737|GO:0006508|GO:0008235|GO:0019538|GO:0030145 G3DSA:3.40.630.10|MF_00181|PF00883|PR00481|PS00631|PTHR11963|PTHR11963:SF13|SSF53187 B2904_RS01030 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24222|PTHR24222:SF26|SM00382|SSF52540|SSF90123 B2904_RS01035 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24221|SM00382|SSF52540|SSF90123 B2904_RS01040 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001647|IPR009057|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|PTHR30055|SSF46689 B2904_RS01050 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007401 Protein of unknown function DUF454 PF04304|PIRSF016789|PTHR35813|PTHR35813:SF1 B2904_RS01060 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000115|IPR011054|IPR013815|IPR013816|IPR016185|IPR020560|IPR020561|IPR020562 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Phosphoribosylglycinamide synthetase|Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain|Phosphoribosylglycinamide synthetase, C-domain|Phosphoribosylglycinamide synthetase, N-terminal|Pre-ATP-grasp domain|Rudiment single hybrid motif GO:0003824|GO:0004637|GO:0005524|GO:0009113 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|G3DSA:3.90.600.10|MF_00138|PF01071|PF02843|PF02844|PTHR10520|SM01209|SM01210|SSF51246|SSF52440|SSF56059|TIGR00877 B2904_RS01065 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR024529 ECF transporter, substrate-specific component GO:0005215 PF12822 B2904_RS01080 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|SM00382|SSF52540 B2904_RS01085 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003339 ABC/ECF transporter, transmembrane component PF02361|PTHR33514 B2904_RS01095 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007401 Protein of unknown function DUF454 PF04304|PIRSF016789|PTHR35813|PTHR35813:SF1 B2904_RS01100 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR020483 Uncharacterised protein family YgbA PD075772|PF11756 B2904_RS01105 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR008838 Variable surface protein, Brachyspira PF05540 B2904_RS01115 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001278|IPR001412|IPR005148|IPR008909|IPR009080|IPR014729 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Aminoacyl-tRNA synthetase, class I, conserved site|Arginine-tRNA ligase|Arginyl tRNA synthetase N-terminal domain|DALR anticodon binding|Rossmann-like alpha/beta/alpha sandwich fold GO:0000166|GO:0004812|GO:0004814|GO:0005524|GO:0005737|GO:0006418|GO:0006420 G3DSA:1.10.730.10|G3DSA:3.30.1360.70|G3DSA:3.40.50.620|MF_00123|PF00750|PF03485|PF05746|PR01038|PS00178|PTHR11956|PTHR11956:SF6|SM00836|SM01016|SSF47323|SSF52374|SSF55190 B2904_RS01120 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011063|IPR012094|IPR012795|IPR012796|IPR014729|IPR020825 Lysidine-tRNA(Ile) synthetase, C-terminal|Phenylalanyl-tRNA synthetase, B3/B4|Rossmann-like alpha/beta/alpha sandwich fold|tRNA(Ile)-lysidine synthase|tRNA(Ile)-lysidine synthase, N-terminal|tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 G3DSA:3.40.50.620|PF01171|PF11734|PTHR11807|PTHR11807:SF2|SM00977|SSF52402|SSF56037|TIGR02432|TIGR02433 B2904_RS01135 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR024952 Lipoprotein LPP20-like PF02169 B2904_RS01145 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005534 Curli production assembly/transport component CsgG GO:0030288 PF03783 B2904_RS01155 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002035 von Willebrand factor, type A G3DSA:3.40.50.410|PF13519|PTHR36846|SM00327|SSF53300 B2904_RS01160 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011704|IPR027417 ATPase, dynein-related, AAA domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF07728|PTHR32204|SSF52540 B2904_RS01165 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13424|PTHR23083|PTHR23083:SF412|SM00028|SSF48452|SSF81901 B2904_RS01175 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003682|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 G3DSA:3.40.50.150|MF_00074|PF02527|PIRSF003078|PTHR31760|PTHR31760:SF0|SSF53335|TIGR00138 B2904_RS01185 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001585|IPR004731|IPR013785|IPR018225|IPR022999 Aldolase-type TIM barrel|Transaldolase type 3B, putative|Transaldolase type 3B/Fructose-6-phosphate aldolase|Transaldolase, active site|Transaldolase/Fructose-6-phosphate aldolase GO:0003824|GO:0004801|GO:0005975 G3DSA:3.20.20.70|MF_00494|PF00923|PS00958|PS01054|PTHR10683|SSF51569|TIGR00875 B2904_RS01195 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011703|IPR016366|IPR027417 ATPase chaperone, AAA-type, MoxR, predicted|ATPase, AAA-3|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:1.10.8.300|G3DSA:3.40.50.300|PF07726|PIRSF002849|PTHR11603|PTHR11603:SF148|SSF52540 B2904_RS01200 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR010262 Arylsulfotransferase PF05935 B2904_RS01210 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 PF03553|PTHR33451|PTHR33451:SF7 B2904_RS01215 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 G3DSA:3.40.50.270|PF02302|PTHR33843|PTHR33843:SF2|SSF52794 B2904_RS01220 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 PF03611|PTHR33843|PTHR33843:SF4 B2904_RS01225 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005474|IPR029061|IPR033247 Thiamin diphosphate-binding fold|Transketolase family|Transketolase, N-terminal G3DSA:3.40.50.970|PF00456|PTHR11624|PTHR11624:SF86|SSF52518 B2904_RS01230 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005475|IPR009014|IPR029061|IPR033247|IPR033248 Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase family|Transketolase, C-terminal domain|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0008152 G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF02779|PF02780|PTHR11624|PTHR11624:SF2|SM00861|SSF52518|SSF52922 B2904_RS01235 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002178|IPR016152 PTS EIIA type-2 domain|Phosphotransferase/anion transporter GO:0005215|GO:0006810 G3DSA:3.40.930.10|PF00359|PS00372|PTHR36203|SSF55804 B2904_RS01240 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 G3DSA:3.40.50.270|PF02302|PTHR33843|PTHR33843:SF2|SSF52794 B2904_RS01245 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 PF03611|PTHR33843|PTHR33843:SF4 B2904_RS01250 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001264|IPR001460|IPR012338|IPR023346 Beta-lactamase/transpeptidase-like|Glycosyl transferase, family 51|Lysozyme-like domain|Penicillin-binding protein, transpeptidase GO:0008658 G3DSA:1.10.3810.10|G3DSA:3.40.710.10|PF00905|PF00912|PTHR32282|PTHR32282:SF5|SSF53955|SSF56601 B2904_RS01255 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002813|IPR016117 ArgJ-like domain|Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 G3DSA:3.60.70.12|MF_01106|PD004193|PF01960|PTHR23100|PTHR23100:SF0|SSF56266 B2904_RS01270 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001670|IPR018211 Alcohol dehydrogenase, iron-type|Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 G3DSA:1.20.1090.10|G3DSA:3.40.50.1970|PF00465|PS00060|PS00913|PTHR11496|PTHR11496:SF79|SSF56796 B2904_RS01275 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000771|IPR013785 Aldolase-type TIM barrel|Ketose-bisphosphate aldolase, class-II GO:0003824|GO:0005975|GO:0008270|GO:0016832 G3DSA:3.20.20.70|PF01116|PIRSF001359|PS00806|PTHR30304|SSF51569|TIGR00167 B2904_RS01280 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003353|IPR003501|IPR006327 Phosphotransferase system, EIIB component, type 2/3|Phosphotransferase system, fructose IIC component|Phosphotransferase system, fructose-specific IIB subunit GO:0005351|GO:0008982|GO:0009401|GO:0016021|GO:0022877 G3DSA:3.40.50.2300|PF02302|PTHR30505|PTHR30505:SF0|SSF52794|TIGR00829|TIGR01427 B2904_RS01285 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002178|IPR016152 PTS EIIA type-2 domain|Phosphotransferase/anion transporter GO:0005215|GO:0006810 G3DSA:3.40.930.10|PF00359|PS00372|PTHR30505|SSF55804 B2904_RS01290 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001034|IPR011991|IPR014036|IPR018356 DeoR C-terminal sensor domain|DeoR-type HTH domain|Transcription regulator, HTH DeoR-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.1360|PF00455|PF08220|PS00894|PTHR30363|PTHR30363:SF1|SM00420|SM01134|SSF100950|SSF46785 B2904_RS01295 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 B2904_RS01305 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002495|IPR029044 Glycosyl transferase, family 8|Nucleotide-diphospho-sugar transferases GO:0016757 G3DSA:3.90.550.10|PF01501|PTHR13778|PTHR13778:SF1|SSF53448 B2904_RS01310 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD PF03706|PTHR39087|TIGR00374 B2904_RS01320 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR025335 Protein of unknown function DUF4241 PF14025 B2904_RS01325 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001086|IPR002701|IPR008242|IPR011279|IPR018528|IPR020822 Bifunctional P-protein, chorismate mutase/prephenate dehydratase|Chorismate mutase|Chorismate mutase, Gram-positive|Chorismate mutase, type II|Prephenate dehydratase|Prephenate dehydratase, conserved site GO:0004106|GO:0004664|GO:0005737|GO:0009094|GO:0046417 G3DSA:1.20.59.10|G3DSA:3.30.70.260|G3DSA:3.40.190.10|PF00800|PF01817|PIRSF001500|PS00857|PTHR21022|PTHR21022:SF0|SM00830|SSF48600|SSF53850|SSF55021|TIGR01805 B2904_RS01335 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000836|IPR001754|IPR004467|IPR011060|IPR013785|IPR014732|IPR018089|IPR023031|IPR029057 Aldolase-type TIM barrel|Orotate phosphoribosyl transferase domain|Orotate phosphoribosyltransferase|Orotidine 5'-phosphate decarboxylase|Orotidine 5'-phosphate decarboxylase domain|Orotidine 5'-phosphate decarboxylase, active site|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like|Ribulose-phosphate binding barrel GO:0003824|GO:0004588|GO:0004590|GO:0006207|GO:0006221|GO:0008152|GO:0009116|GO:0044205 G3DSA:3.20.20.70|G3DSA:3.40.50.2020|MF_01200_B|MF_01208|PF00156|PF00215|PS00156|PTHR32119|PTHR32119:SF2|SM00934|SSF51366|SSF53271|TIGR00336|TIGR01740 B2904_RS01340 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005720|IPR012135|IPR013785|IPR024920 Aldolase-type TIM barrel|Dihydroorotate dehydrogenase domain|Dihydroorotate dehydrogenase, class 1|Dihydroorotate dehydrogenase, class 1/ 2 GO:0003824|GO:0004152|GO:0005737|GO:0006221|GO:0006222|GO:0016627|GO:0055114 G3DSA:3.20.20.70|MF_00224|PF01180|PIRSF000164|PTHR11938|PTHR11938:SF5|SSF51395|TIGR01037 B2904_RS01345 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001433|IPR012165|IPR017938|IPR019480 Cytochrome-c3 hydrogenase, gamma subunit|Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain|Oxidoreductase FAD/NAD(P)-binding|Riboflavin synthase-like beta-barrel GO:0006221|GO:0016491|GO:0050660|GO:0051537|GO:0055114 G3DSA:2.10.240.10|G3DSA:2.40.30.10|G3DSA:3.40.50.80|PF00175|PF10418|PIRSF006816|PTHR19370|PTHR19370:SF68|SSF52343|SSF63380 B2904_RS01350 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007837|IPR027369 DNA damage-inducible protein DinB|DinB/YfiT-like putative metal-dependent hydrolase G3DSA:1.20.120.450|PF05163|SSF109854 B2904_RS01355 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000836|IPR029057 Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0009116 G3DSA:3.40.50.2020|PF00156|SSF53271 B2904_RS01375 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR009080|IPR014729|IPR015273|IPR015803|IPR024909|IPR032678 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Cysteine-tRNA ligase|Cysteinyl-tRNA synthetase, class Ia, DALR|Cysteinyl-tRNA synthetase/mycothiol ligase|Rossmann-like alpha/beta/alpha sandwich fold|tRNA synthetases class I, catalytic domain GO:0000166|GO:0004812|GO:0004817|GO:0005524|GO:0005737|GO:0006418|GO:0006423 G3DSA:1.20.120.640|G3DSA:3.40.50.620|MF_00041|PF01406|PF09190|PR00983|PTHR10890|SM00840|SSF47323|SSF52374|TIGR00435 B2904_RS01380 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR012337 Ribonuclease H-like domain GO:0003676 G3DSA:3.30.420.10|PF13482|PTHR38462|SSF53098 B2904_RS01385 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 G3DSA:1.20.1090.10|G3DSA:3.40.50.1970|PF00465|PTHR11496|PTHR11496:SF75|SSF56796 B2904_RS01390 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011704|IPR027417 ATPase, dynein-related, AAA domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF07728|PTHR22908|PTHR22908:SF54|SSF52540 B2904_RS01405 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001059|IPR008991|IPR011768|IPR012340|IPR013185|IPR013852|IPR014722|IPR015365|IPR020599 Elongation factor P, C-terminal|Nucleic acid-binding, OB-fold|Ribosomal protein L2 domain 2|Translation elongation factor P|Translation elongation factor P/YeiP|Translation elongation factor P/YeiP, central|Translation elongation factor P/YeiP, conserved site|Translation elongation factor, KOW-like|Translation protein SH3-like domain GO:0003746|GO:0005737|GO:0006414|GO:0043043 G3DSA:2.30.30.30|G3DSA:2.40.50.140|MF_00141|PF01132|PF08207|PF09285|PIRSF005901|PS01275|PTHR30053|SM00841|SM01185|SSF50104|SSF50249|TIGR00038 B2904_RS01410 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR009695 Diacylglycerol glucosyltransferase, N-terminal GO:0009247|GO:0016758 G3DSA:3.40.50.2000|PF06925|PTHR21015|PTHR21015:SF21|SSF53756 B2904_RS01420 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|SM00448|SSF52172 B2904_RS01425 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000780|IPR022641|IPR022642|IPR029063 Chemotaxis receptor methyltransferase CheR, N-terminal|MCP methyltransferase, CheR-type|MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal|S-adenosyl-L-methionine-dependent methyltransferase GO:0008757 G3DSA:1.10.155.10|G3DSA:3.40.50.150|PF01739|PF03705|PR00996|PTHR24422|SM00138|SSF47757|SSF53335 B2904_RS01430 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007607 Protein of unknown function DUF583 G3DSA:2.160.10.10|PF04519|PTHR35024|PTHR35024:SF2 B2904_RS01435 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13424|PF13432|PTHR23083|SM00028|SSF48452 B2904_RS01445 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007221 Rod shape-determining protein MreC GO:0008360 PF04085|PIRSF038471|PTHR34138|PTHR34138:SF1|TIGR00219 B2904_RS01450 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 PF04093|TIGR03426 B2904_RS01455 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002716|IPR002792|IPR005016|IPR029060 PIN domain|PIN domain-like|Serine incorporator/TMS membrane protein|TRAM domain GO:0016020 G3DSA:3.40.50.1010|PF01938|PF03348|PTHR11603|PTHR11603:SF147|SM00670|SSF88723 B2904_RS01460 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003711 CarD-like/TRCF domain PF02559|PTHR38447|SM01058|SSF141259 B2904_RS01465 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004588|IPR011060|IPR013785|IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial|4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type|Aldolase-type TIM barrel|Ribulose-phosphate binding barrel GO:0003824|GO:0005506|GO:0008152|GO:0008299|GO:0016114|GO:0046429|GO:0055114 G3DSA:3.20.20.70|MF_00159|PF04551|PIRSF004640|PTHR30454|SSF51366|SSF56014|TIGR00612 B2904_RS01470 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003374|IPR024932 ApbE-like domain|Flavin transferase ApbE GO:0017013 PF02424|PIRSF006268|PTHR30040|PTHR30040:SF2|SSF143631 B2904_RS01480 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000836|IPR005904|IPR029057 Hypoxanthine phosphoribosyl transferase|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0004422|GO:0005737|GO:0006166|GO:0009116 G3DSA:3.40.50.2020|PF00156|PTHR22573|PTHR22573:SF56|SSF53271|TIGR01203 B2904_RS01485 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001308|IPR014729|IPR014730|IPR014731|IPR029035 DHS-like NAD/FAD-binding domain|Electron transfer flavoprotein alpha subunit/FixB|Electron transfer flavoprotein, alpha subunit, C-terminal|Electron transfer flavoprotein, alpha/beta-subunit, N-terminal|Rossmann-like alpha/beta/alpha sandwich fold GO:0009055|GO:0050660 G3DSA:3.40.50.1220|G3DSA:3.40.50.620|PF00766|PF01012|PIRSF000089|PTHR10909|PTHR10909:SF294|SM00893|SSF52402|SSF52467 B2904_RS01490 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR012255|IPR014729|IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal|Electron transfer flavoprotein, beta subunit|Rossmann-like alpha/beta/alpha sandwich fold GO:0009055 G3DSA:3.40.50.620|PF01012|PIRSF000090|PTHR21294|PTHR21294:SF0|SM00893|SSF52402 B2904_RS01495 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006089|IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase, conserved site|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PIRSF016578|PS00072|PS00073|PTHR10909|PTHR10909:SF305|SSF47203|SSF56645 B2904_RS01500 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002539|IPR029069 HotDog domain|MaoC-like domain G3DSA:3.10.129.10|PF01575|PTHR13078|SSF54637 B2904_RS01505 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007793 DivIVA family PF05103|SSF160527 B2904_RS01510 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR024492 Protein of unknown function DUF2764 PD181473|PF10962 B2904_RS01515 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000194|IPR000793|IPR004100|IPR020003|IPR027417|IPR031686 ATPase, F1 complex alpha/beta subunit, N-terminal domain|ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|ATPsynthase alpha/beta subunit, N-terminal extension|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015991|GO:0015992|GO:0016820|GO:0033178|GO:0046034 G3DSA:3.40.50.300|PF00006|PF02874|PF16886|PS00152|PTHR15184|PTHR15184:SF7|SSF47917|SSF52540 B2904_RS01520 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000194|IPR027417 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF00006|PTHR15184|PTHR15184:SF11|SSF52540 B2904_RS01525 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002699 ATPase, V1 complex, subunit D GO:0042626 PF01813 B2904_RS01530 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002490 V-type ATPase, V0 complex, 116kDa subunit family GO:0015078|GO:0015991|GO:0033179 PF01496|PTHR11629 B2904_RS01535 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 G3DSA:1.20.120.610|PF00137|SSF81333 B2904_RS01540 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011663|IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain|UbiC transcription regulator-associated GO:0003677|GO:0006355 G3DSA:3.40.1410.10|PF07702|SM00866|SSF64288 B2904_RS01545 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001996|IPR003352|IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site|Phosphotransferase system, EIIC|Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401|GO:0016020 G3DSA:3.30.1360.60|PF00367|PF02378|PS01035|PTHR30175|PTHR30175:SF9|SSF55604 B2904_RS01550 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001360|IPR013781|IPR017853|IPR018120|IPR033132 Glycoside hydrolase family 1|Glycoside hydrolase family 1, active site|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycosyl hydrolases family 1, N-terminal conserved site GO:0004553|GO:0005975 G3DSA:3.20.20.80|PF00232|PR00131|PS00572|PS00653|PTHR10353|PTHR10353:SF35|SSF51445 B2904_RS01555 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011040 Sialidases G3DSA:2.120.10.10|SSF50939 B2904_RS01560 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR015168 SsuA/THI5-like G3DSA:3.40.190.10|PF09084|PTHR30024|SSF53850 B2904_RS01565 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30151|PTHR30151:SF0|SSF161098 B2904_RS01570 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF10|SM00382|SSF52540 B2904_RS01575 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR013785 Aldolase-type TIM barrel GO:0003824 G3DSA:3.20.20.70|SSF51412 B2904_RS01580 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001638|IPR015168 Solute-binding protein family 3/N-terminal domain of MltF|SsuA/THI5-like G3DSA:3.40.190.10|PF09084|PTHR30024|SM00062|SSF53850 B2904_RS01585 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000600|IPR011991 ROK family|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|G3DSA:3.30.420.40|PF00480|PTHR18964|PTHR18964:SF123|SSF46785|SSF53067 B2904_RS01590 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925|PTHR30269 B2904_RS01595 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005679|IPR006032|IPR012340 Nucleic acid-binding, OB-fold|Ribosomal protein S12, bacteria|Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015935 G3DSA:2.40.50.140|MF_00403_B|PF00164|PIRSF002133|PR01034|PS00055|PTHR11652|SSF50249|TIGR00981 B2904_RS01600 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000235|IPR005717|IPR020606|IPR023798 Ribosomal protein S5/S7|Ribosomal protein S7 domain|Ribosomal protein S7, bacterial/organellar-type|Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412|GO:0015935 G3DSA:1.10.455.10|MF_00480_B|PF00177|PIRSF002122|PS00052|PTHR11205|SSF47973|TIGR01029 B2904_RS01605 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000640|IPR000795|IPR004161|IPR004540|IPR005225|IPR005517|IPR009000|IPR009022|IPR014721|IPR020568|IPR027417|IPR031157 Elongation factor G, III-V domain|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFG, V domain|Translation elongation factor EFG/EF2|Translation elongation factor EFG/EF2, domain IV|Translation elongation factor EFTu/EF1A, domain 2|Translation protein, beta-barrel domain GO:0003746|GO:0003924|GO:0005525|GO:0005622|GO:0006414 G3DSA:2.40.30.10|G3DSA:3.30.230.10|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|MF_00054_B|PF00009|PF00679|PF03144|PF03764|PF14492|PR00315|PS00301|PTHR23115|PTHR23115:SF66|SM00838|SM00889|SSF50447|SSF52540|SSF54211|SSF54980|TIGR00231|TIGR00484 B2904_RS01610 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000795|IPR004160|IPR004161|IPR004541|IPR005225|IPR009000|IPR009001|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Transcription factor, GTP-binding domain|Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal|Translation elongation factor EFTu/EF1A, C-terminal|Translation elongation factor EFTu/EF1A, bacterial/organelle|Translation elongation factor EFTu/EF1A, domain 2|Translation protein, beta-barrel domain GO:0003746|GO:0003924|GO:0005525|GO:0005622|GO:0006414 G3DSA:2.40.30.10|G3DSA:3.40.50.300|MF_00118_B|PF00009|PF03143|PF03144|PR00315|PTHR23115|PTHR23115:SF112|SSF50447|SSF50465|SSF52540|TIGR00231|TIGR00485 B2904_RS01615 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001848|IPR018268|IPR027486 Ribosomal protein S10|Ribosomal protein S10 domain|Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.70.600|MF_00508|PF00338|PR00971|PS00361|PTHR11700|SM01403|SSF54999|TIGR01049 B2904_RS01620 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000597|IPR009000|IPR019926|IPR019927 Ribosomal protein L3|Ribosomal protein L3, bacterial/organelle-type|Ribosomal protein L3, conserved site|Translation protein, beta-barrel domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.40.30.10|G3DSA:4.10.960.10|MF_01325_B|PF00297|PS00474|PTHR11229|SSF50447|TIGR03625 B2904_RS01625 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002136|IPR013005|IPR023574 50S ribosomal protein uL4|Ribosomal protein L4 domain|Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 G3DSA:3.40.1370.10|MF_01328_B|PF00573|PTHR10746|SSF52166|TIGR03953 B2904_RS01630 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR012677|IPR012678|IPR013025 Nucleotide-binding alpha-beta plait domain|Ribosomal protein L23/L15e core domain|Ribosomal protein L25/L23 GO:0000166|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.70.330|MF_01369_B|PF00276|SSF54189 B2904_RS01635 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002171|IPR005880|IPR008991|IPR012340|IPR014722|IPR014726|IPR022666|IPR022669|IPR022671 Nucleic acid-binding, OB-fold|Ribosomal Proteins L2, RNA binding domain|Ribosomal protein L2|Ribosomal protein L2 domain 2|Ribosomal protein L2, C-terminal|Ribosomal protein L2, bacterial/organellar-type|Ribosomal protein L2, conserved site|Ribosomal protein L2, domain 3|Translation protein SH3-like domain GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015934|GO:0016740 G3DSA:2.30.30.30|G3DSA:2.40.50.140|G3DSA:4.10.950.10|MF_01320_B|PF00181|PF03947|PIRSF002158|PS00467|PTHR13691|PTHR13691:SF5|SM01382|SM01383|SSF50104|SSF50249|TIGR01171 B2904_RS01640 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002222|IPR005732|IPR020934|IPR023575 Ribosomal protein S19 conserved site|Ribosomal protein S19, bacterial-type|Ribosomal protein S19, superfamily|Ribosomal protein S19/S15 GO:0003723|GO:0003735|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.30.860.10|MF_00531|PF00203|PIRSF002144|PR00975|PS00323|PTHR11880|SSF54570|TIGR01050 B2904_RS01645 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001063|IPR005727 Ribosomal protein L22, bacterial/chloroplast-type|Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412|GO:0015934 G3DSA:3.90.470.10|MF_01331_B|PF00237|PTHR13501|SSF54843|TIGR01044 B2904_RS01650 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001351|IPR004044|IPR004087|IPR005704|IPR009019|IPR015946|IPR018280 K Homology domain|K Homology domain, type 2|K homology domain, prokaryotic type|K homology domain-like, alpha/beta|Ribosomal protein S3, C-terminal|Ribosomal protein S3, bacterial|Ribosomal protein S3, conserved site GO:0003676|GO:0003723|GO:0003735|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.30.1140.32|G3DSA:3.30.300.20|MF_01309_B|PF00189|PF07650|PS00548|PTHR11760|PTHR11760:SF19|SM00322|SSF54814|SSF54821|TIGR01009 B2904_RS01655 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000114|IPR016180|IPR020798 Ribosomal protein L10e/L16|Ribosomal protein L16|Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 G3DSA:3.90.1170.10|MF_01342|PF00252|PR00060|PS00586|PS00701|PTHR12220|SSF54686|TIGR01164 B2904_RS01660 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001854|IPR018254 Ribosomal protein L29|Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.10.287.310|MF_00374|PF00831|PS00579|SSF46561|TIGR00012 B2904_RS01665 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000266|IPR012340|IPR019979|IPR019984 Nucleic acid-binding, OB-fold|Ribosomal protein S17, bacterial-type|Ribosomal protein S17, conserved site|Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.40.50.140|MF_01345_B|PD001295|PF00366|PR00973|PS00056|PTHR10744|SSF50249|TIGR03635 B2904_RS01670 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000218|IPR005745|IPR019972 Ribosomal protein L14P|Ribosomal protein L14P, conserved site|Ribosomal protein L14P, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0015934 G3DSA:2.40.150.20|MF_01367|PF00238|PS00049|PTHR11761|SM01374|SSF50193|TIGR01067 B2904_RS01675 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003256|IPR005824|IPR008991|IPR014722 KOW|Ribosomal protein L2 domain 2|Ribosomal protein L24|Translation protein SH3-like domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.30.30.30|MF_01326_B|PF00467|PF17136|PTHR12903|SM00739|SSF50104|TIGR01079 B2904_RS01680 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002132|IPR020929|IPR020930|IPR022803|IPR031309|IPR031310 Ribosomal protein L5|Ribosomal protein L5 domain|Ribosomal protein L5, C-terminal|Ribosomal protein L5, N-terminal|Ribosomal protein L5, bacterial-type|Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.1440.10|MF_01333_B|PF00281|PF00673|PIRSF002161|PS00358|PTHR11994|SSF55282 B2904_RS01685 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001209|IPR023053 Ribosomal protein S14|Ribosomal protein S14, type Z GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:4.10.830.10|MF_01364_B|PF00253|PTHR19836|SSF57716 B2904_RS01690 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 G3DSA:3.30.1370.30|G3DSA:3.30.1490.10|MF_01302_B|PF00410|PS00053|PTHR11758|SSF56047 B2904_RS01695 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000702|IPR019906|IPR020040 Ribosomal protein L6|Ribosomal protein L6, alpha-beta domain|Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 G3DSA:3.90.930.12|PF00347|PIRSF002162|PR00059|PTHR11655|PTHR11655:SF14|SSF56053|TIGR03654 B2904_RS01700 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004389|IPR005484 Ribosomal protein L18|Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.420.100|MF_01337_B|PF00861|PTHR12899|SSF53137|TIGR00060 B2904_RS01705 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000851|IPR005324|IPR005712|IPR013810|IPR014720|IPR014721|IPR018192|IPR020568 Double-stranded RNA-binding domain|Ribosomal protein S5|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Ribosomal protein S5, C-terminal|Ribosomal protein S5, N-terminal|Ribosomal protein S5, N-terminal, conserved site|Ribosomal protein S5, bacterial-type GO:0003723|GO:0003735|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.30.160.20|G3DSA:3.30.230.10|MF_01307_B|PF00333|PF03719|PS00585|PTHR13718|SSF54211|SSF54768|TIGR01021 B2904_RS01710 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005996|IPR016082 Ribosomal protein L30, bacterial-type|Ribosomal protein L30, ferredoxin-like fold domain GO:0003735|GO:0006412|GO:0015934 G3DSA:3.30.1390.20|MF_01371_B|PF00327|PIRSF002211|PTHR15892|PTHR15892:SF2|SSF55129|TIGR01308 B2904_RS01715 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001196|IPR005749|IPR021131|IPR030878 Ribosomal protein L15|Ribosomal protein L15, bacterial-type|Ribosomal protein L15, conserved site|Ribosomal protein L18e/L15P GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015934 G3DSA:3.100.10.10|MF_01341|PF00828|PS00475|PTHR12934|SSF52080|TIGR01071 B2904_RS01720 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002208|IPR023201|IPR026593|IPR030659 Protein translocase subunit SecY|SecY conserved site|SecY subunit domain|SecY/SEC61-alpha family GO:0015031|GO:0016020 G3DSA:1.10.3370.10|MF_01465|PF00344|PIRSF004557|PR00303|PS00755|PS00756|PTHR10906|PTHR10906:SF2|SSF103491|TIGR00967 B2904_RS01725 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004368|IPR006196|IPR012340|IPR022967 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|RNA-binding domain, S1, IF1 type|Translation initiation factor IF-1 GO:0003723|GO:0003743|GO:0006413 G3DSA:2.40.50.140|MF_00075|PF01176|PTHR33370|SM00316|SSF50249|TIGR00008 B2904_RS01730 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00251|PD002101|PF00444|PS00828|PTHR18804|SSF57840|TIGR01022 B2904_RS01735 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001892|IPR010979|IPR019980|IPR027437 30s ribosomal protein S13, C-terminal|Ribosomal protein S13|Ribosomal protein S13, bacterial-type|Ribosomal protein S13-like, H2TH GO:0003676|GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.10.8.50|G3DSA:4.10.910.10|MF_01315|PF00416|PIRSF002134|PTHR10871|SSF46946|TIGR03631 B2904_RS01740 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001971|IPR018102|IPR019981 Ribosomal S11, conserved site|Ribosomal protein S11|Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.420.80|MF_01310|PF00411|PIRSF002131|PS00054|PTHR11759|SSF53137|TIGR03632 B2904_RS01745 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001912|IPR002942|IPR005709|IPR018079|IPR022801 RNA-binding S4 domain|Ribosomal protein S4, bacterial-type|Ribosomal protein S4, conserved site|Ribosomal protein S4/S9|Ribosomal protein S4/S9, N-terminal GO:0003723|GO:0003735|GO:0005622|GO:0006412|GO:0015935|GO:0019843 G3DSA:1.10.1050.10|G3DSA:3.10.290.10|MF_01306_B|PF00163|PF01479|PS00632|PTHR11831|PTHR11831:SF4|SM00363|SM01390|SSF55174|TIGR01017 B2904_RS01750 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR009025|IPR011260|IPR011262|IPR011263|IPR011773 DNA-directed RNA polymerase, RBP11-like dimerisation domain|DNA-directed RNA polymerase, RpoA/D/Rpb3-type|DNA-directed RNA polymerase, alpha subunit|DNA-directed RNA polymerase, insert domain|RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351|GO:0046983 G3DSA:1.10.150.20|G3DSA:2.170.120.12|G3DSA:3.30.1360.10|MF_00059|PD001179|PF01000|PF01193|PF03118|PTHR32108|PTHR32108:SF0|SM00662|SSF47789|SSF55257|SSF56553|TIGR02027 B2904_RS01755 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.90.1030.10|PF01196|PTHR14413|PTHR14413:SF5|SSF64263|TIGR00059 B2904_RS01760 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000194|IPR003593|IPR004665|IPR011113|IPR011129|IPR012340|IPR027417 AAA+ ATPase domain|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|Cold shock protein|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Rho termination factor, RNA-binding|Transcription termination factor Rho GO:0003676|GO:0003723|GO:0005524|GO:0006353|GO:0008186 G3DSA:2.40.50.140|G3DSA:3.40.50.300|MF_01884|PF00006|PF07497|PTHR15184|PTHR15184:SF34|SM00357|SM00382|SSF50249|SSF52540|TIGR00767 B2904_RS01765 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002625 Smr domain PF01713|PTHR35562|SM00463|SSF160443 B2904_RS01770 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001270|IPR003593|IPR008921|IPR012763|IPR022754|IPR027417 AAA+ ATPase domain|ClpA/B family|DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|DNA polymerase III, gamma subunit, domain III|DNA polymerase III, subunit gamma/ tau|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003887|GO:0005524|GO:0006260|GO:0009360 G3DSA:1.10.8.60|G3DSA:1.20.272.10|G3DSA:3.40.50.300|PF12169|PF13177|PR00300|PTHR11669|PTHR11669:SF0|SM00382|SSF48019|SSF52540|TIGR02397 B2904_RS01785 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000022|IPR029045 Carboxyl transferase|ClpP/crotonase-like domain G3DSA:3.90.226.10|PF01039|PTHR22855|PTHR22855:SF14|SSF52096 B2904_RS01790 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 PF04277 B2904_RS01795 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000089|IPR001882|IPR011053 Biotin-binding site|Biotin/lipoyl attachment|Single hybrid motif G3DSA:2.40.50.100|PF00364|PS00188|PTHR18866|SSF51230 B2904_RS01800 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 PF03977|PIRSF015658|PTHR35806|TIGR01109 B2904_RS01805 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001638|IPR018313 Solute-binding protein family 3/N-terminal domain of MltF|Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 G3DSA:3.40.190.10|PF00497|PS01039|PTHR18966|PTHR18966:SF191|SM00062|SSF53850 B2904_RS01810 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001638|IPR018313 Solute-binding protein family 3/N-terminal domain of MltF|Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 G3DSA:3.40.190.10|PF00497|PS01039|PTHR18966|PTHR18966:SF191|SM00062|SSF53850 B2904_RS01815 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001320|IPR001638|IPR018313 Ionotropic glutamate receptor|Solute-binding protein family 3/N-terminal domain of MltF|Solute-binding protein family 3, conserved site GO:0004970|GO:0005215|GO:0006810|GO:0016020 G3DSA:3.40.190.10|PF00497|PS01039|PTHR18966|PTHR18966:SF191|SM00062|SM00079|SSF53850 B2904_RS01820 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001440|IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide repeat 1|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF00515|PF13181|PF13432|PTHR23083|SM00028|SSF81901 B2904_RS01825 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002616|IPR004803 Queuine tRNA-ribosyltransferase|tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008033|GO:0008479|GO:0008616 G3DSA:3.20.20.105|MF_00168|PF01702|PTHR21148|PTHR21148:SF26|SSF51713|TIGR00430|TIGR00449 B2904_RS01830 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 MF_01147|PF01790|PS01311|PTHR30589|PTHR30589:SF0|TIGR00544 B2904_RS01840 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001345|IPR005952|IPR013078|IPR029033 Histidine phosphatase superfamily|Histidine phosphatase superfamily, clade-1|Phosphoglycerate mutase 1|Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0004619|GO:0006096|GO:0008152|GO:0016868 G3DSA:3.40.50.1240|MF_01039|PF00300|PIRSF000709|PS00175|PTHR11931|SM00855|SSF53254|TIGR01258 B2904_RS01850 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.20.58.110|MF_00500|PD004231|PF01649|PTHR33398|SSF46992|TIGR00029 B2904_RS01855 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR021533 Putative beta-lactamase-inhibitor-like, PepSY-like PF11396|SSF160574 B2904_RS01860 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003395|IPR027417 P-loop containing nucleoside triphosphate hydrolase|RecF/RecN/SMC, N-terminal G3DSA:3.40.50.300|PF02463|PTHR18937|PTHR18937:SF171|SSF52540 B2904_RS01865 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR012340|IPR022966 Nucleic acid-binding, OB-fold|Ribonuclease II/R, conserved site G3DSA:2.40.50.140|PF00773|PS01175|PTHR23355|PTHR23355:SF9|SM00955|SSF50249 B2904_RS01870 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR026906|IPR032675 Leucine rich repeat 5|Leucine-rich repeat domain, L domain-like PF13306|PTHR11017|SSF52058 B2904_RS01880 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001763|IPR004099|IPR016156|IPR023753 FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain|Rhodanese-like domain GO:0016491|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.40.250.10|G3DSA:3.50.50.60|PF00581|PF02852|PF07992|PR00368|PR00411|PTHR22912|PTHR22912:SF140|SM00450|SSF51905|SSF52821|SSF55424 B2904_RS01885 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011852 TRAP transporter solute receptor, TAXI family G3DSA:3.40.190.10|PF16868|PTHR30024|PTHR30024:SF12|SSF53850|TIGR02122 B2904_RS01890 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR015001 Protein of unknown function DUF1850 PF08905 B2904_RS01895 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR010656|IPR011853 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter, 4TM/12TM fusion protein PF06808|PTHR33362|PTHR33362:SF1|TIGR02123 B2904_RS01900 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR008838 Variable surface protein, Brachyspira PF05540 B2904_RS01905 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR010106 Conserved hypothetical protein CHP01784 PF12784|PTHR41317|PTHR41317:SF1|TIGR01784 B2904_RS01910 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001114|IPR018220|IPR027417|IPR033128 Adenylosuccinate synthase, active site|Adenylosuccinate synthase, GTP-binding site|Adenylosuccinate synthetase|P-loop containing nucleoside triphosphate hydrolase GO:0004019|GO:0005525|GO:0006164 G3DSA:1.10.300.10|G3DSA:3.40.440.10|G3DSA:3.90.170.10|MF_00011|PF00709|PS00513|PS01266|PTHR11846|SM00788|SSF52540|TIGR00184 B2904_RS01915 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR017985|IPR029063 DNA methylase, N-4 cytosine-specific, conserved site|S-adenosyl-L-methionine-dependent methyltransferase GO:0003677|GO:0015667|GO:0090124 G3DSA:3.40.50.150|PS00093|SSF53335 B2904_RS01920 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003111|IPR003593|IPR003959|IPR004815|IPR008268|IPR008269|IPR014721|IPR015947|IPR020568|IPR027065|IPR027417|IPR027543 AAA+ ATPase domain|ATP-dependent protease La (LON), substrate-binding domain|ATPase, AAA-type, core|Lon protease|Lon protease, bacterial|Lon protease, bacterial/eukaryotic-type|P-loop containing nucleoside triphosphate hydrolase|PUA-like domain|Peptidase S16, Lon C-terminal|Peptidase S16, active site|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0030163|GO:0043565 G3DSA:1.10.8.60|G3DSA:3.30.230.10|G3DSA:3.40.50.300|MF_01973|PF00004|PF02190|PF05362|PIRSF001174|PR00830|PS01046|PTHR10046|SM00382|SM00464|SSF52540|SSF54211|SSF88697|TIGR00763 B2904_RS01925 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004838|IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferases, class-I, pyridoxal-phosphate-binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PS00105|PTHR11751|SSF53383 B2904_RS01930 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR014710|IPR018490 Cyclic nucleotide-binding-like|RmlC-like jelly roll fold G3DSA:2.60.120.10|SSF51206 B2904_RS01960 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000843|IPR010982|IPR028082 Lambda repressor-like, DNA-binding domain|Periplasmic binding protein-like I|Transcription regulator HTH, LacI GO:0003677|GO:0003700|GO:0006355 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|PTHR30146|SM00354|SSF47413|SSF53822 B2904_RS01965 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001996|IPR003352|IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site|Phosphotransferase system, EIIC|Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401|GO:0016020 G3DSA:3.30.1360.60|PF00367|PF02378|PS01035|PTHR30175|PTHR30175:SF7|SSF55604|TIGR00826 B2904_RS01970 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001362|IPR006232|IPR013148|IPR013189|IPR013320|IPR018053|IPR023296 Concanavalin A-like lectin/glucanase domain|Glycoside hydrolase, family 32|Glycoside hydrolase, family 32, active site|Glycosyl hydrolase family 32, C-terminal|Glycosyl hydrolase family 32, N-terminal|Glycosyl hydrolase, five-bladed beta-propellor domain|Sucrose-6-phosphate hydrolase GO:0004553|GO:0004564|GO:0005737|GO:0005975 G3DSA:2.115.10.20|G3DSA:2.60.120.560|PF00251|PS00609|PTHR30175|PTHR30175:SF8|SM00640|SSF49899|SSF75005|TIGR01322 B2904_RS01975 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003713 Flagellar protein FliS GO:0044780 G3DSA:1.20.120.340|PF02561|PTHR34773|SSF101116|TIGR00208 B2904_RS01980 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR013783|IPR014756|IPR032640 AMP-activated protein kinase, glycogen-binding domain|Immunoglobulin E-set|Immunoglobulin-like fold G3DSA:2.60.40.10|PF16561|SSF81296 B2904_RS01985 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011990|IPR012336|IPR022910 Tetratricopeptide-like helical domain|Thiol:disulphide interchange protein DsbD|Thioredoxin-like fold GO:0005515|GO:0047134|GO:0055114 G3DSA:1.25.40.10|G3DSA:3.40.30.10|PF13899|PTHR32234|PTHR32234:SF0|SSF48452|SSF52833 B2904_RS01990 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:4.10.640.10|MF_00270|PD002239|PF01084|PR00974|PTHR13479|SSF46911|TIGR00165 B2904_RS01995 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000424|IPR011344|IPR012340 Nucleic acid-binding, OB-fold|Primosome PriB/single-strand DNA-binding|Single-stranded DNA-binding protein GO:0003697|GO:0006260 G3DSA:2.40.50.140|MF_00984|PF00436|PTHR10302|SSF50249|TIGR00621 B2904_RS02000 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000529|IPR014717|IPR020814 Ribosomal protein S6|Ribosomal protein S6, plastid/chloroplast|Translation elongation factor EF1B/ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 G3DSA:3.30.70.60|MF_00360|PF01250|SSF54995|TIGR00166 B2904_RS02005 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001650|IPR011545|IPR012340|IPR014001|IPR027417|IPR033454 DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|RecG, wedge domain GO:0003676|GO:0005524 G3DSA:3.40.50.300|PF00270|PF00271|PF17191|PTHR14025|PTHR14025:SF21|SM00487|SM00490|SSF50249|SSF52540 B2904_RS02010 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006591|IPR029057 Phosphoribosyltransferase-like|RNA polymerase archaeal subunit P/eukaryotic subunit RPABC4 GO:0003677|GO:0003899|GO:0006351 G3DSA:2.20.28.30|G3DSA:3.40.50.2020|PTHR11907|PTHR11907:SF9|SSF53271 B2904_RS02015 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003329|IPR004528|IPR029044 3-deoxy-D-manno-octulosonate cytidylyltransferase|Acylneuraminate cytidylyltransferase|Nucleotide-diphospho-sugar transferases GO:0005737|GO:0008690 G3DSA:3.90.550.10|MF_00057|PF02348|PTHR21485|PTHR21485:SF4|SSF53448|TIGR00466 B2904_RS02020 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002178|IPR016152 PTS EIIA type-2 domain|Phosphotransferase/anion transporter GO:0005215|GO:0006810 G3DSA:3.40.930.10|PF00359|PTHR30505|PTHR30505:SF5|SSF55804 B2904_RS02055 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR010652 Protein of unknown function DUF1232 PF06803 B2904_RS02065 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001048|IPR001341|IPR005260|IPR018042 Aspartate kinase domain|Aspartate kinase, conserved site|Aspartate kinase, monofunctional class|Aspartate/glutamate/uridylate kinase GO:0004072|GO:0008652|GO:0009089 G3DSA:3.40.1160.10|PF00696|PIRSF000726|PS00324|PTHR21499|PTHR21499:SF3|SSF53633|SSF55021|TIGR00657 B2904_RS02070 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR021533 Putative beta-lactamase-inhibitor-like, PepSY-like PF11396|SSF160574 B2904_RS02075 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007235|IPR009695 Diacylglycerol glucosyltransferase, N-terminal|Glycosyl transferase, family 28, C-terminal GO:0009247|GO:0016758 G3DSA:3.40.50.2000|PF04101|PF06925|PTHR21015|PTHR21015:SF21|SSF53756 B2904_RS02080 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR021533 Putative beta-lactamase-inhibitor-like, PepSY-like PF11396|SSF160574 B2904_RS02090 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003660|IPR004089 HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|G3DSA:3.30.450.20|PF00015|PF00672|PTHR32089|SM00283|SSF58104 B2904_RS02095 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002869|IPR009051|IPR011894|IPR017896|IPR017900|IPR019752 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Alpha-helical ferredoxin|Pyruvate-flavodoxin oxidoreductase, central domain|Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016491|GO:0016625|GO:0016903|GO:0051536|GO:0055114 G3DSA:3.30.70.20|G3DSA:3.40.920.10|PF01558|PF12838|PS00198|PTHR32154|PTHR32154:SF2|SSF46548|SSF53323|TIGR02175 B2904_RS02100 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002880|IPR009014|IPR011766|IPR029061|IPR033412 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal|Pyruvate:ferredoxin oxidoreductase, core domain II|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152|GO:0016491|GO:0030976|GO:0055114 G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF01855|PF02775|PF17147|PTHR32154|PTHR32154:SF21|SSF52518|SSF52922 B2904_RS02105 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 B2904_RS02110 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001412|IPR002547|IPR009080|IPR012340|IPR014729|IPR014758|IPR015413|IPR023457 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Aminoacyl-tRNA synthetase, class I, conserved site|Methionine-tRNA synthetase, type 2|Methionyl-tRNA synthetase|Methionyl/Leucyl tRNA synthetase|Nucleic acid-binding, OB-fold|Rossmann-like alpha/beta/alpha sandwich fold|tRNA-binding domain GO:0000049|GO:0000166|GO:0004812|GO:0004825|GO:0005524|GO:0005737|GO:0006418|GO:0006431 G3DSA:1.10.730.10|G3DSA:2.170.220.10|G3DSA:2.40.50.140|G3DSA:3.40.50.620|MF_01228|PF01588|PF09334|PR01041|PS00178|PTHR11946|PTHR11946:SF1|SSF47323|SSF50249|SSF52374|TIGR00398 B2904_RS02115 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR013685 Polypeptide-transport-associated, FtsQ-type PF08478 B2904_RS02125 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 PF03595|PTHR37955|PTHR37955:SF1 B2904_RS02135 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|PTHR10108|PTHR10108:SF330|SSF53335 B2904_RS02140 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006652|IPR015915|IPR019937 Cyclically-permuted mutarotase family|Kelch repeat type 1|Kelch-type beta propeller GO:0005515 G3DSA:2.120.10.80|PF01344|PTHR23244|PTHR23244:SF303|SSF117281|TIGR03548 B2904_RS02145 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PF00474|PTHR11819|PTHR11819:SF161|TIGR00813 B2904_RS02150 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004375 YhcH/YjgK/YiaL family G3DSA:2.60.120.370|PF04074|SSF51197|TIGR00022 B2904_RS02155 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002220|IPR013785|IPR020624 Aldolase-type TIM barrel|DapA-like|Schiff base-forming aldolase, conserved site GO:0003824|GO:0008152|GO:0016829 G3DSA:3.20.20.70|PF00701|PIRSF001365|PR00146|PS00665|PTHR12128|PTHR12128:SF30|SM01130|SSF51569 B2904_RS02160 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011040|IPR026856 Sialidase family|Sialidases GO:0004308 G3DSA:2.120.10.10|PF13088|PTHR10628|PTHR10628:SF5|SSF50939 B2904_RS02165 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR008838 Variable surface protein, Brachyspira PF05540 B2904_RS02170 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR010652 Protein of unknown function DUF1232 PF06803 B2904_RS02175 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR008928|IPR012341 Six-hairpin glycosidase|Six-hairpin glycosidase-like GO:0003824 G3DSA:1.50.10.10|PF07221|PTHR15108|SSF48208 B2904_RS02180 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000415|IPR020051|IPR029479 Nitroreductase|Nitroreductase-like|SagB-type dehydrogenase domain GO:0016491 G3DSA:3.40.109.10|PF00881|SSF55469|TIGR03605 B2904_RS02185 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000594|IPR016040 NAD(P)-binding domain|THIF-type NAD/FAD binding fold GO:0008641 G3DSA:3.40.50.720|SSF69572 B2904_RS02190 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003776 YcaO-like domain PF02624|PTHR37809 B2904_RS02195 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003675 CAAX amino terminal protease GO:0016020 PF02517 B2904_RS02205 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|SM00382|SSF52540 B2904_RS02210 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000412|IPR013525 ABC-2 transporter|ABC-2 type transporter GO:0006810|GO:0016020 PF01061|PIRSF006648|PTHR30294 B2904_RS02215 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005149|IPR011991 Transcription regulator PadR, N-terminal|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF03551|PTHR33169|SSF46785 B2904_RS02245 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SSF48452 B2904_RS02250 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|SM00382|SSF52540 B2904_RS02255 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003838 ABC transporter permease protein domain GO:0016020 PF02687|PTHR30489 B2904_RS02260 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic G3DSA:2.50.20.10 B2904_RS02275 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000644|IPR006667|IPR006668|IPR006669 CBS domain|Magnesium transporter MgtE|Magnesium transporter, MgtE intracellular domain|SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324|GO:0015095|GO:0015693|GO:0016020 G3DSA:1.10.357.20|G3DSA:1.25.60.10|G3DSA:3.10.580.10|PF00571|PF01769|PF03448|PTHR11911|PTHR11911:SF23|SM00116|SM00924|SSF158791|SSF161093|SSF54631|TIGR00400 B2904_RS02280 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000023|IPR012003|IPR012828|IPR015912|IPR022953 ATP-dependent 6-phosphofructokinase|ATP-dependent 6-phosphofructokinase, prokaryotic|ATP-dependent 6-phosphofructokinase, prokaryotic-type|Phosphofructokinase domain|Phosphofructokinase, conserved site GO:0003872|GO:0005524|GO:0006002|GO:0006096|GO:0008443 G3DSA:3.40.50.450|MF_00339|PF00365|PIRSF000532|PR00476|PS00433|PTHR13697|PTHR13697:SF4|SSF53784|TIGR02482 B2904_RS02285 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 PF03808|PTHR34136 B2904_RS02295 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004089|IPR004090 Chemotaxis methyl-accepting receptor|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020 G3DSA:1.10.287.950|PF00015|PR00260|PTHR32089|SM00283|SSF58104 B2904_RS02305 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004013|IPR010140|IPR016195 Histidinol phosphate phosphatase, HisJ|PHP domain|Polymerase/histidinol phosphatase-like GO:0000105|GO:0003824|GO:0004401 G3DSA:3.20.20.140|PF02811|PTHR21039|SSF89550|TIGR01856 B2904_RS02310 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000121|IPR002192|IPR008279|IPR010121|IPR013815|IPR013816|IPR015813|IPR018274 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|PEP-utilising enzyme, C-terminal|PEP-utilising enzyme, active site|PEP-utilising enzyme, mobile domain|Pyruvate phosphate dikinase, PEP/pyruvate-binding|Pyruvate, phosphate dikinase|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0005524|GO:0006090|GO:0016301|GO:0016310|GO:0016772|GO:0050242 G3DSA:1.10.189.10|G3DSA:1.20.80.30|G3DSA:3.20.20.60|G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.50.30.10|PF00391|PF01326|PF02896|PS00370|PTHR22931|PTHR22931:SF9|SSF51621|SSF52009|SSF56059|TIGR01828 B2904_RS02315 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006543|IPR006549|IPR023214 HAD-like domain|HAD-superfamily hydrolase,subfamily IIIA|Histidinol-phosphate phosphatase GO:0016791 G3DSA:3.40.50.1000|PF13242|PTHR23133|PTHR23133:SF3|SSF56784|TIGR01656|TIGR01662 B2904_RS02320 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000340|IPR016130|IPR029021 Dual specificity phosphatase, catalytic domain|Protein-tyrosine phosphatase, active site|Protein-tyrosine phosphatase-like GO:0004725|GO:0006470|GO:0008138|GO:0016311|GO:0016791 G3DSA:3.90.190.10|PF00782|PS00383|SSF52799 B2904_RS02330 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000873|IPR020845 AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PS00455|PTHR24096|PTHR24096:SF193|SSF56801 B2904_RS02335 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001395|IPR020471|IPR023210 Aldo/keto reductase|Aldo/keto reductase/potassium channel subunit beta|NADP-dependent oxidoreductase domain GO:0016491|GO:0055114 G3DSA:3.20.20.100|PF00248|PR00069|PTHR11732|SSF51430 B2904_RS02340 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001707|IPR023213 Chloramphenicol acetyltransferase|Chloramphenicol acetyltransferase-like domain GO:0008811 G3DSA:3.30.559.10|PD002660|PF00302|PIRSF000440|PTHR38474|PTHR38474:SF2|SM01059|SSF52777 B2904_RS02350 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR021457 Protein of unknown function DUF3108 PF11306 B2904_RS02355 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002376|IPR005793|IPR005794|IPR011034 Formyl transferase, C-terminal|Formyl transferase, C-terminal-like|Formyl transferase, N-terminal|Methionyl-tRNA formyltransferase GO:0003824|GO:0004479|GO:0009058|GO:0016742|GO:0071951 G3DSA:3.10.25.10|G3DSA:3.40.50.170|PF00551|PF02911|PTHR11138|SSF50486|SSF53328|TIGR00460 B2904_RS02360 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005543 PASTA domain PF03793|SM00740 B2904_RS02365 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13489|PTHR10108|SSF53335 B2904_RS02370 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005646|IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal|Protein of unknown function DUF342 GO:0000902 G3DSA:2.160.20.70|PF03961|PTHR38032 B2904_RS02375 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011611|IPR011913|IPR029056 Carbohydrate kinase PfkB|RfaE bifunctional protein, domain I|Ribokinase-like GO:0005975|GO:0016773|GO:0016779 G3DSA:3.40.1190.20|PF00294|PTHR10584|PTHR10584:SF159|SSF53613|TIGR02198 B2904_RS02390 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23501|PTHR23501:SF4|SSF103473 B2904_RS02400 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PTHR30290|PTHR30290:SF10|SSF53850 B2904_RS02410 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR009164|IPR029052 Fructose-1,6-bisphosphatase class 3|Metallo-dependent phosphatase-like GO:0006094|GO:0042132 G3DSA:3.60.21.10|MF_01854|PF06874|SSF56300 B2904_RS02415 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR010106 Conserved hypothetical protein CHP01784 PF12784|PTHR41317|PTHR41317:SF1|TIGR01784 B2904_RS02420 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001451|IPR011004|IPR013710|IPR018357|IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH|2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal|Hexapeptide repeat|Hexapeptide transferase, conserved site|Trimeric LpxA-like GO:0009089|GO:0016740|GO:0047200 G3DSA:2.160.10.10|G3DSA:3.30.70.250|MF_01691|PF00132|PF08503|PF14602|PS00101|PTHR23416|PTHR23416:SF50|SSF51161|TIGR03532 B2904_RS02425 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 G3DSA:1.20.1090.10|G3DSA:3.40.50.1970|PF00465|PTHR11496|SSF56796 B2904_RS02430 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003770|IPR013087 Uncharacterised protein family UPF0755, YceG-like|Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 G3DSA:3.30.160.60|PF02618|PTHR30518|PTHR30518:SF2|TIGR00247 B2904_RS02435 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR010262 Arylsulfotransferase PF05935 B2904_RS02440 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 MF_01129|PF03030|PIRSF001265|PTHR31998|PTHR31998:SF0|TIGR01104 B2904_RS02445 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007324|IPR011991|IPR013324 RNA polymerase sigma factor, region 3/4|Sugar-binding domain, putative|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987|GO:0030246 G3DSA:1.10.10.10|G3DSA:3.40.50.1360|PF04198|PTHR34294|SSF100950|SSF88659 B2904_RS02450 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000917|IPR013320|IPR017849|IPR017850 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Concanavalin A-like lectin/glucanase domain|Sulfatase, N-terminal GO:0003824|GO:0008152|GO:0008484 G3DSA:3.30.1120.10|G3DSA:3.40.720.10|PF00884|PTHR10342|PTHR10342:SF201|SSF49899|SSF53649 B2904_RS02455 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000917|IPR013320|IPR017849|IPR017850|IPR024607 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Concanavalin A-like lectin/glucanase domain|Sulfatase, N-terminal|Sulfatase, conserved site GO:0003824|GO:0008152|GO:0008484 G3DSA:3.30.1120.10|G3DSA:3.40.720.10|PF00884|PS00149|PS00523|PTHR10342|PTHR10342:SF201|SSF49899|SSF53649 B2904_RS02465 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 B2904_RS02470 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000163|IPR001107 Band 7 domain|Prohibitin GO:0016020 PF01145|PR00679|PTHR23222|PTHR23222:SF0|SM00244|SSF117892 B2904_RS02475 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PF00474|PTHR11819 B2904_RS02480 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011055|IPR016047 Duplicated hybrid motif|Peptidase M23 G3DSA:2.70.70.10|PF01551|PTHR21666|SSF51261 B2904_RS02485 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003593|IPR004605|IPR008823|IPR008824|IPR011991|IPR027417 AAA+ ATPase domain|DNA helicase, Holliday junction RuvB type|DNA helicase, Holliday junction RuvB type, C-terminal|Holliday junction DNA helicase ruvB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 G3DSA:1.10.10.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00016|PD005323|PF05491|PF05496|PTHR13779|PTHR13779:SF25|SM00382|SSF46785|SSF52540|TIGR00635 B2904_RS02490 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002110|IPR020683 Ankyrin repeat|Ankyrin repeat-containing domain GO:0005515 G3DSA:1.25.40.20|PF00023|PF12796|PF13606|PF13857|PR01415|PTHR24123|SM00248|SSF48403 B2904_RS02495 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003029|IPR004476|IPR011805|IPR012340|IPR022966|IPR022967 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|Ribonuclease II/R, conserved site|Ribonuclease II/ribonuclease R|Ribonuclease R|S1 domain GO:0003676|GO:0003723|GO:0004518|GO:0004540|GO:0016070 G3DSA:2.40.50.140|MF_01895|PF00575|PF00773|PS01175|PTHR23355|PTHR23355:SF9|SM00316|SM00955|SSF50249|TIGR00358 B2904_RS02500 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR025357 Domain of unknown function DUF4261 PF14080 B2904_RS02505 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001736|IPR022924|IPR025202|IPR027379|IPR030874 Cardiolipin synthase|Cardiolipin synthase N-terminal|Cardiolipin synthase, Firmicutes-type|Phospholipase D-like domain|Phospholipase D/Transphosphatidylase GO:0003824|GO:0008808|GO:0016780|GO:0032049 G3DSA:3.30.870.10|MF_01916|PF13091|PF13396|PTHR21248|PTHR21248:SF10|SM00155|SSF56024|TIGR04265 B2904_RS02510 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR032675 Leucine-rich repeat domain, L domain-like G3DSA:3.80.10.10|SSF52058 B2904_RS02515 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000644|IPR001347|IPR004800 CBS domain|Phosphosugar isomerase, KdsD/KpsF-type|Sugar isomerase (SIS) GO:0005975|GO:0016853|GO:0030246 G3DSA:3.10.580.10|G3DSA:3.40.50.10490|PF00571|PF01380|PIRSF004692|PTHR38418|SM00116|SSF53697|TIGR00393 B2904_RS02520 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003509|IPR011335|IPR011856 Restriction endonuclease type II-like|Uncharacterised protein family UPF0102|tRNA endonuclease-like domain GO:0003676|GO:0004518 G3DSA:3.40.1350.10|MF_00048|PF02021|PTHR34039|PTHR34039:SF1|SSF52980|TIGR00252 B2904_RS02525 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006674 HD domain G3DSA:1.10.3210.10|PF13487|SSF109604 B2904_RS02530 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006135|IPR029025 Type III secretion system substrate exporter|Type III secretion system substrate exporter, C-terminal GO:0009306|GO:0016020 G3DSA:3.40.1690.10|PF01312|PTHR30531|PTHR30531:SF0|SSF160544 B2904_RS02550 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13177|PTHR11669|PTHR11669:SF8|SSF52540 B2904_RS02560 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001189|IPR019831|IPR019832|IPR019833 Manganese/iron superoxide dismutase|Manganese/iron superoxide dismutase, C-terminal|Manganese/iron superoxide dismutase, N-terminal|Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 G3DSA:1.10.287.990|PF00081|PF02777|PIRSF000349|PR01703|PS00088|PTHR11404|PTHR11404:SF8|SSF46609|SSF54719 B2904_RS02565 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003251|IPR004039|IPR009078|IPR012347 Ferritin-like superfamily|Ferritin-related|Rubredoxin-type fold|Rubrerythrin GO:0016491|GO:0046872|GO:0055114 G3DSA:1.20.1260.10|G3DSA:2.20.28.10|PF02915|PTHR33746|PTHR33746:SF1|SSF47240|SSF57802 B2904_RS02570 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000620|IPR004626 EamA domain|RarD protein GO:0005215|GO:0005887|GO:0006810|GO:0016020|GO:0016021 PF00892|PTHR22911|PTHR22911:SF41|SSF103481|TIGR00688 B2904_RS02575 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR010758|IPR024906|IPR024910 Enoyl reductase FAD binding domain|Trans-2-enoyl-CoA reductase|Trans-2-enoyl-CoA reductase catalytic domain, putative GO:0016491|GO:0055114 MF_01838|PF07055|PF12241|PF12242|PTHR37480 B2904_RS02580 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006342|IPR029063 Methyltransferase FkbM|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF05050|SSF53335|TIGR01444 B2904_RS02585 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR021320 Protein of unknown function DUF2905 PF11146|PTHR36443|PTHR36443:SF1 B2904_RS02590 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003148|IPR006037|IPR016040 NAD(P)-binding domain|Regulator of K+ conductance, C-terminal|Regulator of K+ conductance, N-terminal GO:0006813|GO:0008324 G3DSA:3.30.70.1450|G3DSA:3.40.50.720|PF02080|PF02254|PTHR16254|SSF116726|SSF51735 B2904_RS02600 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|PTHR24319|PTHR24319:SF32|SSF51735 B2904_RS02610 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 PF03279|PIRSF026649|PTHR30606 B2904_RS02615 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001478|IPR001940|IPR009003|IPR011782 PDZ domain|Peptidase S1, PA clan|Peptidase S1C|Peptidase S1C, Do GO:0004252|GO:0005515|GO:0006508 G3DSA:2.30.42.10|G3DSA:2.40.10.10|PF13180|PF13365|PR00834|PTHR22939|SM00228|SSF50156|SSF50494|TIGR02037 B2904_RS02620 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001406|IPR020094|IPR020095|IPR020097|IPR020103 Pseudouridine synthase I, TruA|Pseudouridine synthase I, TruA, C-terminal|Pseudouridine synthase I, TruA, N-terminal|Pseudouridine synthase I, TruA, alpha/beta domain|Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.30.70.580|G3DSA:3.30.70.660|MF_00171|PF01416|PIRSF001430|PTHR11142|SSF55120|TIGR00071 B2904_RS02625 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006218|IPR006268|IPR013785 Aldolase-type TIM barrel|DAHP synthetase I/KDSA|Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0003824|GO:0009058|GO:0009073|GO:0016832 G3DSA:3.20.20.70|G3DSA:3.30.70.1140|PF00793|PTHR21057|PTHR21057:SF1|SSF51569|TIGR01361 B2904_RS02630 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005822|IPR005823|IPR023563|IPR023564 Ribosomal protein L13|Ribosomal protein L13 domain|Ribosomal protein L13, bacterial-type|Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 G3DSA:3.90.1180.10|MF_01366|PF00572|PIRSF002181|PS00783|PTHR11545|SSF52161|TIGR01066 B2904_RS02635 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000754|IPR014721|IPR020568|IPR020574|IPR023035 Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Ribosomal protein S9|Ribosomal protein S9, bacterial/plastid|Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 G3DSA:3.30.230.10|MF_00532_B|PF00380|PS00360|PTHR21569|SSF54211 B2904_RS02640 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 PF01258|PTHR33823|PTHR33823:SF4|SSF109635|SSF57716 B2904_RS02645 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001650|IPR005259|IPR006935|IPR014001|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Primosomal protein N' GO:0003677|GO:0004003|GO:0005524|GO:0006260|GO:0016787|GO:0032508 G3DSA:3.40.50.300|MF_00983|PF00271|PF04851|PTHR30580|SM00487|SM00490|SSF52540|TIGR00595 B2904_RS02650 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001789|IPR009061|IPR011006 CheY-like superfamily|Putative DNA-binding domain|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PF12728|PTHR26402|SM00448|SSF46955|SSF52172 B2904_RS02655 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR025117 Domain of unknown function DUF4037 G3DSA:3.30.460.10|PF13228|SSF81301 B2904_RS02690 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001357|IPR001679|IPR003583|IPR004149|IPR004150|IPR010994|IPR012340|IPR013839|IPR013840|IPR018239|IPR033136 BRCT domain|Helix-hairpin-helix DNA-binding motif, class 1|NAD-dependent DNA ligase|NAD-dependent DNA ligase, N-terminal|NAD-dependent DNA ligase, OB-fold|NAD-dependent DNA ligase, active site|NAD-dependent DNA ligase, adenylation|NAD-dependent DNA ligase, conserved site|Nucleic acid-binding, OB-fold|RuvA domain 2-like|Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003677|GO:0003911|GO:0006260|GO:0006281 G3DSA:1.10.150.20|G3DSA:1.10.287.610|G3DSA:2.40.50.140|G3DSA:3.30.470.30|G3DSA:3.40.50.10190|MF_01588|PF00533|PF01653|PF03119|PF03120|PF12826|PIRSF001604|PS01055|PS01056|PTHR23389|PTHR23389:SF9|SM00278|SM00292|SM00532|SSF47781|SSF50249|SSF52113|SSF56091|TIGR00575 B2904_RS02695 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007213|IPR016874|IPR029063 Methyltransferase Ppm1/Ppm2/Tcmp|S-adenosyl-L-methionine-dependent methyltransferase|Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0008168|GO:0017000|GO:0032259|GO:1901106 G3DSA:3.40.50.150|PF04072|PIRSF028177|PTHR13600|PTHR13600:SF19|SSF53335 B2904_RS02700 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 B2904_RS02705 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR010652 Protein of unknown function DUF1232 PF06803 B2904_RS02710 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011990|IPR013105|IPR019734 Tetratricopeptide repeat|Tetratricopeptide repeat 2|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF07719|PF12895|PF13181|PTHR23083|SM00028|SSF48452 B2904_RS02730 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002218|IPR004416|IPR020595|IPR023753|IPR026904 FAD/NAD(P)-binding domain|GidA associated domain 3|MnmG-related, conserved site|tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG|tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0002098|GO:0008033|GO:0016491|GO:0050660|GO:0055114 G3DSA:3.50.50.60|MF_00129|PF01134|PF13932|PS01280|PS01281|PTHR11806|PTHR11806:SF0|SM01228|SSF51905|TIGR00136 B2904_RS02735 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007395 Putative neutral zinc metallopeptidase PF04298|PTHR36434 B2904_RS02740 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic SSF55961 B2904_RS02745 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004137|IPR010048|IPR011254|IPR016099|IPR016100 Hydroxylamine reductase|Hydroxylamine reductase/Ni-containing CO dehydrogenase|Prismane, alpha-bundle|Prismane-like|Prismane-like, alpha/beta-sandwich GO:0003824|GO:0005737|GO:0016491|GO:0016661|GO:0051536|GO:0055114 G3DSA:1.20.1270.20|G3DSA:3.40.50.2030|MF_00069|PF03063|PIRSF000076|PTHR30109|PTHR30109:SF0|SSF56821|TIGR01703 B2904_RS02750 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000944|IPR011991|IPR030489 Transcription regulator Rrf2-type|Transcription regulator Rrf2-type, conserved site|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF02082|PS01332|PTHR33221|SSF46785|TIGR00738 B2904_RS02755 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004506|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 G3DSA:3.40.50.620|PF03054|PTHR11933|PTHR11933:SF6|SSF52402 B2904_RS02770 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001261|IPR002933|IPR010161|IPR011650 ArgE/DapE/ACY1/CPG2/YscS, conserved site|Peptidase M20|Peptidase M20, dimerisation domain|Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006508|GO:0006518|GO:0008152|GO:0008237|GO:0008270|GO:0016787|GO:0045148 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PIRSF037215|PS00758|PS00759|PTHR11014|PTHR11014:SF3|SSF53187|SSF55031|TIGR01882 B2904_RS02775 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR22916|PTHR22916:SF24|SSF53448 B2904_RS02790 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 B2904_RS02795 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003789|IPR004413|IPR006075|IPR017959|IPR018027|IPR023168 Asn/Gln amidotransferase|Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic|Aspartyl/glutamyl-tRNA amidotransferase subunit B-related|Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal|Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit|Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016874|GO:0016884 G3DSA:1.10.10.410|MF_00121|PF02637|PF02934|PTHR11659|PTHR11659:SF0|SM00845|SSF55931|SSF89095|TIGR00133 B2904_RS02810 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR018573 Restriction endonuclease, type II, AlwI PF09491 B2904_RS02815 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006679|IPR006680|IPR011059|IPR026912|IPR032466 Adenine deaminase|Adenine deaminase C-terminal domain|Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0000034|GO:0006146|GO:0016787|GO:0016810 G3DSA:2.30.40.10|MF_01518|PF01979|PF13382|PTHR11113|PTHR11113:SF2|SSF51338|SSF51556|TIGR01178 B2904_RS02820 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007560|IPR011990 Restriction endonuclease type IV, Mrr|Tetratricopeptide-like helical domain GO:0003677|GO:0004519|GO:0005515|GO:0009307 G3DSA:1.25.40.10|PF04471|SSF48452 B2904_RS02825 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007560|IPR011990 Restriction endonuclease type IV, Mrr|Tetratricopeptide-like helical domain GO:0003677|GO:0004519|GO:0005515|GO:0009307 G3DSA:1.25.40.10|PF04471|SSF48452 B2904_RS02830 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003660|IPR004089|IPR033479 Double Cache domain 1|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|G3DSA:3.30.450.20|PF00015|PF00672|PF02743|PTHR32089|PTHR32089:SF63|SM00283|SM00304|SSF58104 B2904_RS02835 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004556|IPR007848|IPR019874|IPR029063 Methyltransferase small domain|Modification methylase HemK|Protein-(glutamine-N5) methyltransferase, release factor-specific|S-adenosyl-L-methionine-dependent methyltransferase GO:0006479|GO:0008168|GO:0008276 G3DSA:1.10.8.10|G3DSA:3.40.50.150|PF05175|PTHR18895|PTHR18895:SF64|SSF53335|TIGR00536|TIGR03534 B2904_RS02845 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011059|IPR013108|IPR032466 Amidohydrolase 3|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF07969|PTHR22642|PTHR22642:SF2|SSF51338|SSF51556 B2904_RS02850 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000453|IPR020541 Chorismate synthase|Chorismate synthase, conserved site GO:0004107|GO:0009073 G3DSA:3.60.150.10|MF_00300|PF01264|PIRSF001456|PS00787|PS00788|PS00789|PTHR21085|SSF103263|TIGR00033 B2904_RS02855 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000683|IPR016040 NAD(P)-binding domain|Oxidoreductase, N-terminal GO:0016491 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01408|PTHR22604|PTHR22604:SF14|SSF51735|SSF55347 B2904_RS02860 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR025997|IPR028082 Periplasmic binding protein|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13407|PTHR30036|PTHR30036:SF2|SSF53822 B2904_RS02865 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR025997|IPR028082 Periplasmic binding protein|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13407|PTHR30036|PTHR30036:SF2|SSF53822 B2904_RS02875 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001519|IPR008331|IPR009078|IPR012347 Ferritin|Ferritin-like superfamily|Ferritin-related|Ferritin/DPS protein domain GO:0006826|GO:0006879|GO:0008199 G3DSA:1.20.1260.10|PF00210|PTHR11431|PTHR11431:SF4|SSF47240 B2904_RS02880 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003439|IPR003593|IPR027417|IPR030921 AAA+ ATPase domain|ABC transporter-like|LPS export ABC transporter, ATP-binding protein LptB|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887|GO:0043190|GO:0055085 G3DSA:3.40.50.300|PF00005|PTHR24220|PTHR24220:SF497|SM00382|SSF52540|TIGR04406 B2904_RS02885 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 PF02535|PTHR11040|PTHR11040:SF33 B2904_RS02890 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001310|IPR011146|IPR019808 HIT-like domain|Histidine triad (HIT) protein|Histidine triad, conserved site GO:0003824 G3DSA:3.30.428.10|PF01230|PR00332|PS00892|PTHR23089|SSF54197 B2904_RS02910 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10 B2904_RS02915 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SSF48452 B2904_RS02920 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR021533 Putative beta-lactamase-inhibitor-like, PepSY-like PF11396|SSF160574 B2904_RS02925 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR021533 Putative beta-lactamase-inhibitor-like, PepSY-like PF11396|SSF160574 B2904_RS02930 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR029046 Lipoprotein localisation LolA/LolB/LppX G3DSA:2.50.20.10|SSF89392 B2904_RS02935 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 G3DSA:1.10.260.40|PF13413|PTHR34475|PTHR34475:SF1 B2904_RS02940 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005839|IPR005840|IPR006638|IPR007197|IPR012340|IPR013848|IPR020612|IPR023404|IPR023970 Elongator protein 3/MiaB/NifB|Methylthiotransferase|Methylthiotransferase, N-terminal|Methylthiotransferase, conserved site|Methylthiotransferase/radical SAM-type protein|Nucleic acid-binding, OB-fold|Radical SAM|Radical SAM, alpha/beta horseshoe|Ribosomal protein S12 methylthiotransferase RimO GO:0003824|GO:0005737|GO:0009451|GO:0016740|GO:0018339|GO:0043412|GO:0051536|GO:0051539 G3DSA:2.40.50.140|G3DSA:3.80.30.20|MF_01865|PF00919|PF04055|PS01278|PTHR11918|PTHR11918:SF57|SM00729|SSF102114|TIGR00089|TIGR01125 B2904_RS02945 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003593|IPR003959|IPR019489|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|Clp ATPase, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF07724|PF10431|PTHR11262|PTHR11262:SF4|SM00382|SM01086|SSF52540 B2904_RS02950 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PTHR30173|SSF88659|SSF88946|TIGR02937 B2904_RS02960 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001270|IPR001943|IPR003593|IPR003959|IPR004176|IPR018368|IPR019489|IPR027417|IPR028299 AAA+ ATPase domain|ATPase, AAA-type, core|Clp ATPase, C-terminal|Clp, N-terminal|ClpA/B family|ClpA/B, conserved site 1|ClpA/B, conserved site 2|P-loop containing nucleoside triphosphate hydrolase|UVR domain GO:0005515|GO:0005524|GO:0019538 G3DSA:1.10.1780.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|G3DSA:4.10.860.10|PF00004|PF02151|PF02861|PF07724|PF10431|PR00300|PS00870|PS00871|PTHR11638|PTHR11638:SF18|SM00382|SM01086|SSF52540|SSF81923 B2904_RS02965 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|PIRSF006603|PTHR11206|PTHR11206:SF132|TIGR00797 B2904_RS02970 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002915|IPR011343|IPR013785|IPR028581 Aldolase-type TIM barrel|DeoC/FbaB/ lacD aldolase|Deoxyribose-phosphate aldolase|Deoxyribose-phosphate aldolase type I GO:0003824|GO:0004139|GO:0005737|GO:0009264|GO:0016829 G3DSA:3.20.20.70|MF_00114|PF01791|PIRSF001357|PTHR10889|SM01133|SSF51569|TIGR00126 B2904_RS02975 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000845|IPR018016|IPR018017 Nucleoside phosphorylase|Nucleoside phosphorylase domain|Nucleoside phosphorylase, conserved site GO:0003824|GO:0009116|GO:0016763 G3DSA:3.40.50.1580|PF01048|PS01232|PTHR21234|PTHR21234:SF8|SSF53167 B2904_RS02980 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000845|IPR018016|IPR018017 Nucleoside phosphorylase|Nucleoside phosphorylase domain|Nucleoside phosphorylase, conserved site GO:0003824|GO:0009116|GO:0016763 G3DSA:3.40.50.1580|PF01048|PS01232|PTHR21234|PTHR21234:SF8|SSF53167 B2904_RS02985 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003760|IPR028082 Basic membrane lipoprotein|Periplasmic binding protein-like I GO:0005886 G3DSA:3.40.50.2300|PF02608|PTHR34296|PTHR34296:SF2|SSF53822 B2904_RS02990 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003760|IPR028082 Basic membrane lipoprotein|Periplasmic binding protein-like I GO:0005886 G3DSA:3.40.50.2300|PF02608|PTHR34296|PTHR34296:SF2|SSF53822 B2904_RS02995 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF239|SM00382|SSF52540 B2904_RS03005 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR32196|PTHR32196:SF40 B2904_RS03010 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000150|IPR006379|IPR023214 Cof protein|HAD-like domain|HAD-superfamily hydrolase, subfamily IIB GO:0016787 G3DSA:3.30.1240.10|G3DSA:3.40.50.1000|PF08282|PS01228|PS01229|PTHR10000|PTHR10000:SF8|SSF56784|TIGR00099|TIGR01484 B2904_RS03015 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000150|IPR006379|IPR023214 Cof protein|HAD-like domain|HAD-superfamily hydrolase, subfamily IIB GO:0016787 G3DSA:3.30.1240.10|G3DSA:3.40.50.1000|PF08282|PS01228|PS01229|PTHR10000|PTHR10000:SF8|SSF56784|TIGR00099|TIGR01484 B2904_RS03020 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006674 HD domain G3DSA:1.10.3210.10|PF01966|SSF109604 B2904_RS03030 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 G3DSA:2.40.170.20|PF00593|SSF56935 B2904_RS03035 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004307 TspO/MBR-related protein GO:0016021 PF03073|PIRSF005859|PTHR10057 B2904_RS03040 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002060|IPR008949|IPR019845 Isoprenoid synthase domain|Squalene/phytoene synthase|Squalene/phytoene synthase, conserved site GO:0009058|GO:0016740|GO:0016765 G3DSA:1.10.600.10|PF00494|PS01044|PTHR11626|PTHR11626:SF2|SSF48576 B2904_RS03045 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003526|IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase|2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685|GO:0016114 G3DSA:3.30.1330.50|MF_00107|PF02542|PS01350|PTHR32125|SSF69765|TIGR00151 B2904_RS03050 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001036|IPR018247|IPR027463 Acriflavin resistance protein|EF-Hand 1, calcium-binding site|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PS00018|PTHR32063|SSF82693|SSF82714|SSF82866 B2904_RS03055 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 G3DSA:1.20.1600.10|PF02321|PTHR30203|SSF56954 B2904_RS03060 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001647|IPR009057|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|SSF46689 B2904_RS03070 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR029057 Phosphoribosyltransferase-like G3DSA:3.40.50.2020|SSF53271 B2904_RS03075 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002547|IPR004532|IPR005121|IPR005146|IPR005147|IPR009061|IPR012340|IPR020825 B3/B4 tRNA-binding domain|Nucleic acid-binding, OB-fold|Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding|Phenylalanine-tRNA ligase, class IIc, beta subunit|Phenylalanyl-tRNA synthetase, B3/B4|Putative DNA-binding domain|tRNA synthetase, B5-domain|tRNA-binding domain GO:0000049|GO:0000287|GO:0003723|GO:0004826|GO:0005524|GO:0005737|GO:0006432|GO:0008033 G3DSA:2.40.50.140|G3DSA:3.30.56.10|G3DSA:3.30.56.20|G3DSA:3.30.70.380|G3DSA:3.30.930.10|G3DSA:3.50.40.10|MF_00283|PF01588|PF03147|PF03483|PF03484|PTHR10947|PTHR10947:SF0|SM00873|SM00874|SM00896|SSF46955|SSF50249|SSF54991|SSF55681|SSF56037|TIGR00472 B2904_RS03080 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002319|IPR004188|IPR004529|IPR010978|IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial|Phenylalanine-tRNA ligase, class II, N-terminal|Phenylalanyl-tRNA synthetase|Phenylalanyl-tRNA synthetase, class IIc, alpha subunit|tRNA-binding arm GO:0000049|GO:0000166|GO:0004812|GO:0004826|GO:0005524|GO:0005737|GO:0006432|GO:0043039 G3DSA:3.30.930.10|MF_00281|PF01409|PF02912|PTHR11538|SSF46589|SSF55681|TIGR00468 B2904_RS03085 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 PF02386|PTHR32024|PTHR32024:SF1 B2904_RS03090 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004175|IPR009097 RNA 2',3'-cyclic phosphodiesterase|RNA ligase/cyclic nucleotide phosphodiesterase GO:0004113|GO:0008664 G3DSA:3.90.1140.10|MF_01940|PF13563|PTHR35561|PTHR35561:SF1|SSF55144|TIGR02258 B2904_RS03095 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003265|IPR011257|IPR023170 DNA glycosylase|Helix-turn-helix, base-excision DNA repair, C-terminal|HhH-GPD domain GO:0003824|GO:0006281|GO:0006284 G3DSA:1.10.1670.10|G3DSA:1.10.340.30|SM00478|SSF48150 B2904_RS03100 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|SSF56300 B2904_RS03105 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.1140.10|PF13555|SSF52540 B2904_RS03110 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011990|IPR012336 Tetratricopeptide-like helical domain|Thioredoxin-like fold GO:0005515 G3DSA:1.25.40.10|G3DSA:3.40.30.10|PF13899|SSF48452|SSF52833 B2904_RS03115 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 B2904_RS03120 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 PF04347 B2904_RS03130 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005046|IPR011889|IPR025406 Bacterial surface protein 26-residue repeat|Domain of unknown function DUF4132|Protein of unknown function DUF285 PF03382|PF13569|TIGR02167 B2904_RS03140 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|PIRSF006603|PTHR11206|PTHR11206:SF132 B2904_RS03145 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007337 RelB antitoxin/Antitoxin DinJ PF04221|TIGR02384 B2904_RS03150 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR009614 Toxin YoeB GO:0004519|GO:0006401 PF06769|PTHR38039|PTHR38039:SF1|SSF143011|TIGR02116 B2904_RS03155 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR021254 Protein of unknown function DUF2806 PF10987 B2904_RS03160 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001412|IPR002300|IPR002303|IPR009008|IPR009080|IPR010978|IPR013155|IPR014729|IPR019499 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold|Valine-tRNA ligase|Valyl-tRNA synthetase, tRNA-binding arm|Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain|tRNA-binding arm GO:0000166|GO:0002161|GO:0004812|GO:0004832|GO:0005524|GO:0005737|GO:0006418|GO:0006438 G3DSA:1.10.287.380|G3DSA:1.10.730.10|G3DSA:3.40.50.620|G3DSA:3.90.740.10|MF_02004|PF00133|PF08264|PF10458|PR00986|PS00178|PTHR11946|PTHR11946:SF5|SSF46589|SSF47323|SSF50677|SSF52374|TIGR00422 B2904_RS03165 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic G3DSA:1.10.287.950|SSF58104 B2904_RS03170 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004089|IPR004090 Chemotaxis methyl-accepting receptor|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020 G3DSA:1.10.287.950|PF00015|PR00260|SSF58104 B2904_RS03175 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 PF02674 B2904_RS03180 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|PTHR11206|PTHR11206:SF95|TIGR00797 B2904_RS03185 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PTHR30290|PTHR30290:SF10|SSF53850 B2904_RS03190 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002933|IPR011650|IPR017439 Amidohydrolase|Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PIRSF005962|PTHR11014|PTHR11014:SF63|SSF53187|SSF55031|TIGR01891 B2904_RS03195 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011697|IPR029062 Class I glutamine amidotransferase-like|Peptidase C26 GO:0006541|GO:0016787 G3DSA:3.40.50.880|PF07722|PTHR11922|PTHR11922:SF18|SSF52317 B2904_RS03210 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000103|IPR023753 FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF07992|PR00368|PR00469|PTHR22912|PTHR22912:SF175|SSF51905 B2904_RS03215 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR015417|IPR016585 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta|Glycine/sarcosine/betaine reductase, component B, fused alpha/beta GO:0050485|GO:0055114 PF09338|PIRSF011588 B2904_RS03220 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006812 Glycine reductase complex selenoprotein A GO:0030699|GO:0030700|GO:0050485|GO:0055114 PF04723 B2904_RS03225 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006812 Glycine reductase complex selenoprotein A GO:0030699|GO:0030700|GO:0050485|GO:0055114 PF04723|PIRSF000181 B2904_RS03230 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family GO:0050485|GO:0055114 PF07355|TIGR01918 B2904_RS03235 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family GO:0050485|GO:0055114 TIGR01918 B2904_RS03240 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR013751|IPR016039 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III|Thiolase-like GO:0003824|GO:0004315|GO:0006633|GO:0008152 G3DSA:3.40.47.10|PF08545|SSF53901 B2904_RS03245 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003664|IPR012116|IPR024084 Fatty acid synthesis PlsX protein|Glycine/sarcosine/betaine reductase complex, protein C, alpha subunit|Isopropylmalate dehydrogenase-like domain GO:0003824|GO:0006633|GO:0016616|GO:0016747|GO:0055114 G3DSA:3.40.718.10|PF02504|PIRSF036593|SSF53659 B2904_RS03250 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PF01235|PR00175|PS00873|PTHR30330|PTHR30330:SF4|TIGR00835 B2904_RS03255 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PF01235|PR00175|PS00873|PTHR30330|PTHR30330:SF4|TIGR00835 B2904_RS03260 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 G3DSA:2.102.10.10|PF00355|PTHR21266|PTHR21266:SF23|SSF50022|SSF55961 B2904_RS03265 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004396|IPR006073|IPR012675|IPR012676|IPR013029|IPR023192|IPR027417 Beta-grasp domain|Domain of unknown function DUF933|GTP binding domain|P-loop containing nucleoside triphosphate hydrolase|Ribosome-binding ATPase YchF/Obg-like ATPase 1|TGS-like|TGS-like domain GO:0005525 G3DSA:1.10.150.300|G3DSA:3.10.20.30|G3DSA:3.40.50.300|MF_00944|PF01926|PF06071|PIRSF006641|PR00326|PTHR23305|SSF52540|SSF81271|TIGR00092 B2904_RS03275 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 G3DSA:1.10.3860.10|PF00375|PR00173|PTHR11958|SSF118215 B2904_RS03280 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 B2904_RS03285 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005130|IPR021144 Serine dehydratase-like, alpha subunit|Uncharacterised protein family UPF0597 MF_01845|PF03313|PIRSF006054|PTHR30501|PTHR30501:SF2 B2904_RS03295 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13432|PTHR23083|SM00028|SSF48452 B2904_RS03300 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007922 Protein of unknown function DUF721/UPF0232 PF05258 B2904_RS03315 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005019|IPR011257 DNA glycosylase|Methyladenine glycosylase GO:0003824|GO:0006281|GO:0006284|GO:0008725 G3DSA:1.10.340.30|PF03352|PTHR30037|PTHR30037:SF4|SSF48150 B2904_RS03320 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003841|IPR004633|IPR026022 Na/Pi-cotransporter II-related/YqeW-like protein|PhoU domain|Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 G3DSA:1.20.58.220|PF01895|PF02690|PTHR10010|PTHR10010:SF26|SSF109755|TIGR00704 B2904_RS03325 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004089|IPR033479 Double Cache domain 1|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 G3DSA:1.10.287.950|G3DSA:3.30.450.20|G3DSA:3.40.50.10710|PF00015|PF02743|PTHR32089|SM00283|SSF58104 B2904_RS03330 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006062|IPR011060|IPR013785 Aldolase-type TIM barrel|Histidine biosynthesis|Ribulose-phosphate binding barrel GO:0000105|GO:0003824|GO:0008152 G3DSA:3.20.20.70|PF00977|SSF51366 B2904_RS03350 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001395|IPR005399|IPR023210 Aldo/keto reductase/potassium channel subunit beta|NADP-dependent oxidoreductase domain|Potassium channel, voltage-dependent, beta subunit, KCNAB-related G3DSA:3.20.20.100|PF00248|PR01577|PTHR11732|PTHR11732:SF191|SSF51430 B2904_RS03355 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13432|PTHR23083|SM00028|SSF48452|SSF81901 B2904_RS03360 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001469|IPR020546 ATPase, F1 complex, delta/epsilon subunit|ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 G3DSA:2.60.15.10|MF_00530|PD000944|PF02823|SSF51344|TIGR01216 B2904_RS03370 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006683|IPR006684|IPR008272|IPR029069 4-hydroxybenzoyl-CoA thioesterase, active site|Acyl-CoA thioester hydrolase YbgC/YbaW family|HotDog domain|Thioesterase domain GO:0016787 G3DSA:3.10.129.10|PF03061|PIRSF003230|PS01328|PTHR31793|PTHR31793:SF9|SSF54637|TIGR00051 B2904_RS03375 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR009875 PilZ domain GO:0035438 G3DSA:2.40.10.220|PF07238 B2904_RS03380 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002698|IPR024185 5-formyltetrahydrofolate cyclo-ligase|5-formyltetrahydrofolate cyclo-ligase-like domain G3DSA:3.40.50.10420|PF01812|PIRSF006806|PTHR23407|PTHR23407:SF1|SSF100950|TIGR02727 B2904_RS03385 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 G3DSA:2.30.30.40|G3DSA:2.40.50.180|PF01584|PTHR22617|PTHR22617:SF33|SM00260|SSF50341 B2904_RS03390 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 B2904_RS03400 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000086|IPR015797|IPR020084 NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site GO:0016787 G3DSA:3.90.79.10|PF00293|PS00893|PTHR22769|SSF55811 B2904_RS03405 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR014998 Protein of unknown function DUF1848 PF08902 B2904_RS03410 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002575|IPR009212|IPR011009 Aminoglycoside phosphotransferase|Methylthioribose kinase|Protein kinase-like domain GO:0009086|GO:0046522 G3DSA:3.90.1200.10|MF_01683|PF01636|PIRSF031134|PTHR34273|PTHR34273:SF2|SSF56112|TIGR01767 B2904_RS03415 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000649|IPR005251|IPR011559|IPR027363 Initiation factor 2B alpha/beta/delta|Initiation factor 2B-related|Methylthioribose-1-phosphate isomerase|Methylthioribose-1-phosphate isomerase-like, N-terminal domain GO:0044237|GO:0044249 G3DSA:1.20.120.420|G3DSA:3.40.50.10470|MF_01678|PF01008|PTHR10233|PTHR10233:SF6|SSF100950|TIGR00512|TIGR00524 B2904_RS03425 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001763 Rhodanese-like domain G3DSA:3.40.250.10|PF00581|SM00450|SSF52821 B2904_RS03430 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR015414|IPR032816 SNARE associated Golgi protein|Transmembrane protein TMEM64/TMEM41 GO:0016021 PF09335|PTHR12677|PTHR12677:SF20 B2904_RS03435 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR015414|IPR032816 SNARE associated Golgi protein|Transmembrane protein TMEM64/TMEM41 GO:0016021 PF09335|PTHR12677|PTHR12677:SF5 B2904_RS03450 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR018641|IPR029044 Nucleotide-diphospho-sugar transferases|Transferase 1, rSAM/selenodomain-associated G3DSA:3.90.550.10|PF09837|PTHR36529|SSF53448|TIGR04282 B2904_RS03455 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001173|IPR026461|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases|Transferase 2, rSAM/selenodomain-associated G3DSA:3.90.550.10|PF00535|PTHR10859|PTHR10859:SF92|SSF53448|TIGR04283 B2904_RS03470 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001307|IPR001763 Rhodanese-like domain|Thiosulphate sulfurtransferase, conserved site GO:0004792 G3DSA:3.40.250.10|PF00581|PS00380|PTHR11364|PTHR11364:SF15|SM00450|SSF52821 B2904_RS03475 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR025406 Domain of unknown function DUF4132 PF13569 B2904_RS03480 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003199|IPR005079|IPR029055 Choloylglycine hydrolase/Peptidase C59 family|Nucleophile aminohydrolases, N-terminal|Peptidase C45 GO:0016811 G3DSA:3.60.60.10|PF03417|SSF56235 B2904_RS03485 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000383|IPR029058 Alpha/Beta hydrolase fold|Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 G3DSA:3.40.50.1820|PF02129|PTHR17630|PTHR17630:SF49|SSF53474 B2904_RS03490 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002645|IPR003658 Anti-sigma factor antagonist|STAS domain GO:0006355|GO:0045152 G3DSA:3.30.750.24|PF01740|PTHR33495|SSF52091|TIGR00377 B2904_RS03495 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011042|IPR011659|IPR011990|IPR019734|IPR023114 Elongated TPR repeat-containing domain|Six-bladed beta-propeller, TolB-like|Tetratricopeptide repeat|Tetratricopeptide-like helical domain|WD40-like Beta Propeller GO:0005515 G3DSA:1.10.150.160|G3DSA:1.25.40.10|G3DSA:2.120.10.30|PF07676|SM00028|SSF48452|SSF82171 B2904_RS03500 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000831|IPR010921|IPR013335 Trp repressor|Trp repressor, bacterial|Trp repressor/replication initiator GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.1270.10|PD012582|PF01371|SSF48295 B2904_RS03510 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000943|IPR007624|IPR007627|IPR007630|IPR009042|IPR011991|IPR013324|IPR013325|IPR014284|IPR016263 RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 1.2|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 3|RNA polymerase sigma-70 region 4|RNA polymerase sporulation-specific sigma factor|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006351|GO:0006352|GO:0006355|GO:0016987|GO:0030435 G3DSA:1.10.10.10|G3DSA:1.10.601.10|PF00140|PF04539|PF04542|PF04545|PIRSF000770|PR00046|PS00716|PTHR30603|PTHR30603:SF0|SSF88659|SSF88946|TIGR02937 B2904_RS03515 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001789|IPR004463|IPR011006|IPR011334|IPR015870|IPR020568 CheY-like superfamily|Ribosomal protein S5 domain 2-type fold|Signal transduction response regulator, receiver domain|UDP-3-O-acyl N-acetylglucosamine deacetylase|UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal|UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0000160|GO:0008759|GO:0009245 G3DSA:3.30.1700.10|G3DSA:3.30.230.20|G3DSA:3.40.50.2300|PF00072|PF03331|PTHR33694|SM00448|SSF52172|SSF54211|TIGR00325 B2904_RS03520 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR008599|IPR009057|IPR025736 Homeodomain-like|PucR C-terminal helix-turn-helix domain|Putative sugar diacid recognition GO:0003677 G3DSA:1.10.10.60|PF05651|PF13556|PTHR33744|PTHR33744:SF1 B2904_RS03525 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 PF02447|PTHR30354|PTHR30354:SF3 B2904_RS03530 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004381|IPR018193 Glycerate kinase|Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 G3DSA:3.90.1510.10|PF02595|PIRSF006078|PTHR21599|PTHR21599:SF0|SSF110738|TIGR00045 B2904_RS03535 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000653|IPR015421|IPR015422|IPR015424 DegT/DnrJ/EryC1/StrS aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01041|PTHR30244|PTHR30244:SF3|SSF53383 B2904_RS03540 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001764|IPR017853 Glycoside hydrolase superfamily|Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 G3DSA:3.20.20.300|PF00933|SSF51445 B2904_RS03560 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic PF13730 B2904_RS03565 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR021533 Putative beta-lactamase-inhibitor-like, PepSY-like PF11396|SSF160574 B2904_RS03570 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001645|IPR004101|IPR013221 Folylpolyglutamate synthetase|Mur ligase, C-terminal|Mur ligase, central GO:0004326|GO:0005524|GO:0009058|GO:0009396|GO:0016874 G3DSA:3.40.1190.10|G3DSA:3.90.190.20|PF08245|PIRSF001563|PTHR11136|SSF53244|SSF53623|TIGR01499 B2904_RS03575 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000551|IPR009061|IPR015358 MerR-type HTH domain|Putative DNA-binding domain|Transcription regulator MerR, DNA binding GO:0003677|GO:0006355 G3DSA:1.10.1660.10|PF00376|PF09278|PR00040|PS00552|PTHR30204|PTHR30204:SF2|SM00422|SSF46955 B2904_RS03580 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR029000 Cyclophilin-like domain SSF50891 B2904_RS03585 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001395|IPR020471|IPR023210 Aldo/keto reductase|Aldo/keto reductase/potassium channel subunit beta|NADP-dependent oxidoreductase domain GO:0016491|GO:0055114 G3DSA:3.20.20.100|PF00248|PR00069|PTHR11732|SSF51430 B2904_RS03590 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001395|IPR020471|IPR023210 Aldo/keto reductase|Aldo/keto reductase/potassium channel subunit beta|NADP-dependent oxidoreductase domain GO:0016491|GO:0055114 G3DSA:3.20.20.100|PF00248|PR00069|PTHR11732|PTHR11732:SF269|SSF51430 B2904_RS03595 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR008254|IPR029039 Flavodoxin/nitric oxide synthase|Flavoprotein-like domain GO:0010181 G3DSA:3.40.50.360|PF12682|PTHR39201|PTHR39201:SF1|SSF52218 B2904_RS03600 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|PTHR33570|PTHR33570:SF5|SSF51182 B2904_RS03615 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005025|IPR029039 Flavoprotein-like domain|NADPH-dependent FMN reductase-like GO:0016491 G3DSA:3.40.50.360|PF03358|PTHR10204|PTHR10204:SF5|SSF52218 B2904_RS03620 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR025658|IPR029000 Cyclophilin TM1367-like domain|Cyclophilin-like domain PF04126|SSF50891 B2904_RS03625 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003779|IPR029032 AhpD-like|Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 G3DSA:1.20.1290.10|PF02627|PTHR33570|PTHR33570:SF4|SSF69118 B2904_RS03630 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001226|IPR008254|IPR029039 Flavodoxin, conserved site|Flavodoxin/nitric oxide synthase|Flavoprotein-like domain GO:0009055|GO:0010181 G3DSA:3.40.50.360|PF12682|PS00201|PTHR39201|PTHR39201:SF1|SSF52218 B2904_RS03635 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00081|SSF51735 B2904_RS03640 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR008254|IPR029039 Flavodoxin/nitric oxide synthase|Flavoprotein-like domain GO:0010181 G3DSA:3.40.50.360|PF12682|PTHR39201|PTHR39201:SF1|SSF52218 B2904_RS03645 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR025517 Domain of unknown function DUF4405 PF14358 B2904_RS03650 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011611|IPR029056 Carbohydrate kinase PfkB|Ribokinase-like G3DSA:3.40.1190.20|PF00294|PTHR10584|PTHR10584:SF196|SSF53613 B2904_RS03655 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase G3DSA:1.20.144.10|PF01569|PTHR14969|SM00014|SSF48317 B2904_RS03660 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004089|IPR029151|IPR033479 Double Cache domain 1|Methyl-accepting chemotaxis protein (MCP) signalling domain|Periplasmic sensor domain-like GO:0004871|GO:0007165|GO:0016020 G3DSA:1.10.287.950|G3DSA:3.30.450.20|PF00015|PF02743|PTHR32089|PTHR32089:SF63|SM00283|SSF103190|SSF58104 B2904_RS03665 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005025|IPR029039 Flavoprotein-like domain|NADPH-dependent FMN reductase-like GO:0016491 G3DSA:3.40.50.360|PF03358|PTHR10204|PTHR10204:SF5|SSF52218 B2904_RS03670 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PTHR30290|PTHR30290:SF10|SSF53850 B2904_RS03685 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000515|IPR025966 ABC transporter type 1, transmembrane domain MetI-like|Oligopeptide transport permease C-like, N-terminal domain GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PF12911|PTHR30465|PTHR30465:SF9|SSF161098 B2904_RS03690 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30465|PTHR30465:SF45|SSF161098 B2904_RS03710 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001957|IPR003593|IPR010921|IPR013159|IPR013317|IPR018312|IPR020591|IPR027417 AAA+ ATPase domain|Chromosomal replication control, initiator DnaA|Chromosomal replication control, initiator DnaA, conserved site|Chromosomal replication control, initiator DnaA-like|Chromosomal replication initiator protein DnaA|Chromosomal replication initiator, DnaA C-terminal|P-loop containing nucleoside triphosphate hydrolase|Trp repressor/replication initiator GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275|GO:0043565 G3DSA:1.10.1750.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00377|PF00308|PF08299|PR00051|PS01008|PTHR30050|PTHR30050:SF2|SM00382|SM00760|SSF48295|SSF52540|TIGR00362 B2904_RS03715 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000740|IPR009012|IPR013805 GrpE nucleotide exchange factor|GrpE nucleotide exchange factor, coiled-coil|GrpE nucleotide exchange factor, head GO:0000774|GO:0006457|GO:0042803|GO:0051087 G3DSA:2.30.22.10|G3DSA:3.90.20.20|MF_01151|PF01025|PR00773|PS01071|PTHR21237|SSF51064|SSF58014 B2904_RS03725 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR012725|IPR013126|IPR018181|IPR029047|IPR029048 Chaperone DnaK|Heat shock protein 70 family|Heat shock protein 70, conserved site|Heat shock protein 70kD, C-terminal domain|Heat shock protein 70kD, peptide-binding domain GO:0005524|GO:0006457|GO:0051082 G3DSA:1.20.1270.10|G3DSA:2.60.34.10|G3DSA:3.30.30.30|G3DSA:3.30.420.40|G3DSA:3.90.640.10|MF_00332|PF00012|PR00301|PS00297|PS00329|PS01036|PTHR19375|PTHR19375:SF173|SSF100920|SSF100934|SSF53067|TIGR02350 B2904_RS03730 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR010106 Conserved hypothetical protein CHP01784 PF12784|PTHR41317|PTHR41317:SF1|TIGR01784 B2904_RS03735 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002547|IPR008231|IPR012340 Nucleic acid-binding, OB-fold|Probable chaperone CsaA|tRNA-binding domain GO:0000049 G3DSA:2.40.50.140|PF01588|PTHR11586|SSF50249|TIGR02222 B2904_RS03740 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011704|IPR027417 ATPase, dynein-related, AAA domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF07728|PTHR13779|PTHR13779:SF30|SSF52540 B2904_RS03745 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003733|IPR013785|IPR022998 Aldolase-type TIM barrel|Thiamin phosphate synthase superfamily|Thiamine phosphate synthase GO:0003824|GO:0004789|GO:0009228 G3DSA:3.20.20.70|MF_00097|PF02581|PTHR20857|PTHR20857:SF15|SSF51391|TIGR00693 B2904_RS03750 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR016071 Staphylococcal nuclease (SNase-like), OB-fold G3DSA:2.40.50.90|PF00565|SSF50199 B2904_RS03755 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001127|IPR001996|IPR003352|IPR011055|IPR018113 Duplicated hybrid motif|Phosphotransferase system EIIB, cysteine phosphorylation site|Phosphotransferase system, EIIC|Phosphotransferase system, IIB component, type 1|Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0008982|GO:0009401|GO:0016020 G3DSA:2.70.70.10|G3DSA:3.30.1360.60|PF00358|PF00367|PF02378|PS00371|PS01035|PTHR30009|PTHR30009:SF2|SSF51261|SSF55604|TIGR00826|TIGR00830 B2904_RS03760 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011990|IPR018704 Tetratricopeptide repeat-like domain|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF09976|SSF48452 B2904_RS03765 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001650|IPR006935|IPR014001|IPR027417|IPR032438|IPR032830 ERCC3/RAD25/XPB helicase, C-terminal domain|Helicase XPB/Ssl2, N-terminal domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0005524|GO:0016787 G3DSA:3.40.50.300|PF04851|PF13625|PF16203|PR00851|PTHR11274|SM00487|SM00490|SSF52540 B2904_RS03770 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR22916|SSF53448 B2904_RS03775 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR029032 AhpD-like G3DSA:1.20.1290.10|SSF69118 B2904_RS03780 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR008763 Peptidase S55, SpoIVB PF05580 B2904_RS03785 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003961|IPR011042|IPR013783 Fibronectin type III|Immunoglobulin-like fold|Six-bladed beta-propeller, TolB-like GO:0005515 G3DSA:2.120.10.30|G3DSA:2.60.40.10|SSF101898|SSF49265 B2904_RS03810 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001048|IPR011817|IPR015963 Aspartate/glutamate/uridylate kinase|Uridylate kinase|Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0009041|GO:0033862 G3DSA:3.40.1160.10|MF_01220_B|PF00696|PIRSF005650|PTHR21499|PTHR21499:SF23|SSF53633|TIGR02075 B2904_RS03815 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR015866|IPR022853 Serine-tRNA synthetase, type1, N-terminal|Uncharacterised protein family YdfA-immunity G3DSA:1.10.287.40|MF_01562|PF12127 B2904_RS03820 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006674 HD domain G3DSA:1.10.3210.10|PF01966|SSF109604 B2904_RS03830 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000131|IPR023633 ATPase, F1 complex, gamma subunit|ATPase, F1 complex, gamma subunit domain GO:0015986|GO:0045261|GO:0046933|GO:0046961 G3DSA:1.10.287.80|G3DSA:3.40.1380.10|MF_00815|PF00231|PR00126|PTHR11693|SSF52943|TIGR01146 B2904_RS03835 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003406 Glycosyl transferase, family 14 GO:0008375|GO:0016020 PF02485 B2904_RS03840 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000194|IPR000793|IPR004100|IPR005294|IPR020003|IPR023366|IPR027417 ATP synthase subunit alpha-like domain|ATPase, F1 complex alpha/beta subunit, N-terminal domain|ATPase, F1 complex, alpha subunit|ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015986|GO:0015991|GO:0015992|GO:0016820|GO:0033178|GO:0045261|GO:0046034|GO:0046933|GO:0046961 G3DSA:1.20.150.20|G3DSA:2.40.30.20|G3DSA:3.40.50.300|MF_01346|PF00006|PF00306|PF02874|PIRSF039088|PS00152|PTHR15184|PTHR15184:SF3|SSF47917|SSF50615|SSF52540|TIGR00962 B2904_RS03845 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000711|IPR020781|IPR026015 ATPase, OSCP/delta subunit|ATPase, OSCP/delta subunit, conserved site|F1F0 ATP synthase OSCP/delta subunit, N-terminal domain GO:0015986|GO:0016020|GO:0046933 G3DSA:1.10.520.20|MF_01416|PF00213|PR00125|PS00389|PTHR11910|SSF47928|TIGR01145 B2904_RS03850 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000711|IPR020781|IPR026015 ATPase, OSCP/delta subunit|ATPase, OSCP/delta subunit, conserved site|F1F0 ATP synthase OSCP/delta subunit, N-terminal domain GO:0015986|GO:0016020|GO:0046933 G3DSA:1.10.520.20|MF_01416|PF00213|PR00125|PS00389|PTHR11910|PTHR11910:SF1|SSF47928|TIGR01145 B2904_RS03855 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002146|IPR005864|IPR028987 ATPase, F0 complex, subunit B, bacterial|ATPase, F0 complex, subunit B/B', bacterial/chloroplast|F-type ATP synthase subunit B-like, membrane domain GO:0015078|GO:0015986|GO:0045263 G3DSA:1.20.5.620|MF_01398|PF00430|PTHR33445|SSF81573|TIGR01144 B2904_RS03860 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000454|IPR002379|IPR005953|IPR020537 ATPase, F0 complex, subunit C|ATPase, F0 complex, subunit C, DCCD-binding site|ATPase, F0 complex, subunit C, bacterial/chloroplast|V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015986|GO:0015991|GO:0033177|GO:0045263 G3DSA:1.20.20.10|MF_01396|PF00137|PR00124|PS00605|PTHR10031|SSF81333|TIGR01260 B2904_RS03865 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000568|IPR023011 ATPase, F0 complex, subunit A|ATPase, F0 complex, subunit A, active site GO:0015078|GO:0015986 G3DSA:1.20.120.220|MF_01393|PF00119|PR00123|PS00449|PTHR11410|SSF81336|TIGR01131 B2904_RS03870 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002645|IPR003658 Anti-sigma factor antagonist|STAS domain GO:0006355|GO:0045152 G3DSA:3.30.750.24|PF01740|PTHR33495|SSF52091|TIGR00377 B2904_RS03875 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004843|IPR006179|IPR008334|IPR029052 5'-Nucleotidase, C-terminal|5'-Nucleotidase/apyrase|Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0009166|GO:0016787 G3DSA:3.60.21.10|G3DSA:3.90.780.10|PF00149|PF02872|PR01607|PTHR11575|SSF55816|SSF56300 B2904_RS03880 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13176|PF13181|PF13432|PTHR23083|SM00028|SSF48452 B2904_RS03885 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006027|IPR011605 NusB antitermination factor|NusB/RsmB/TIM44 GO:0003723|GO:0006353|GO:0006355 G3DSA:1.10.940.10|MF_00073|PF01029|PTHR11078|SSF48013|TIGR01951 B2904_RS03890 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001412|IPR002300|IPR002301|IPR009008|IPR009080|IPR010663|IPR013155|IPR014729|IPR023585 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia|Isoleucine-tRNA ligase|Isoleucine-tRNA ligase, type 1|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold|Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain|Zinc finger, FPG/IleRS-type GO:0000166|GO:0002161|GO:0004812|GO:0004822|GO:0005524|GO:0005737|GO:0006418|GO:0006428 G3DSA:1.10.730.10|G3DSA:3.40.50.620|G3DSA:3.90.740.10|MF_02002|PF00133|PF06827|PF08264|PR00984|PS00178|PTHR11946|PTHR11946:SF11|SSF47323|SSF50677|SSF52374|TIGR00392 B2904_RS03905 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR025382 Domain of unknown function DUF4297 PF14130 B2904_RS03910 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002052|IPR003356|IPR025931|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|DNA methylase, adenine-specific|S-adenosyl-L-methionine-dependent methyltransferase|TaqI-like C-terminal specificity domain GO:0003676|GO:0003677|GO:0006306|GO:0008168|GO:0008170|GO:0032259 G3DSA:3.40.50.150|PF02384|PF12950|PR00507|PS00092|PTHR33841|PTHR33841:SF1|SSF53335 B2904_RS03915 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007560|IPR011335|IPR011856 Restriction endonuclease type II-like|Restriction endonuclease type IV, Mrr|tRNA endonuclease-like domain GO:0003676|GO:0003677|GO:0004518|GO:0004519|GO:0009307 G3DSA:3.40.1350.10|PF04471|SSF52980 B2904_RS03920 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR010359 HTH domain, IrrE-type PF06114 B2904_RS03925 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006047|IPR013781|IPR015902|IPR017853|IPR032792 Glycogen debranching enzyme, glucanotransferase domain|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 G3DSA:3.20.20.80|PF14701|PTHR10357|SM00642|SSF51445 B2904_RS03930 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003018|IPR003594|IPR003661|IPR004358|IPR029016 GAF domain|GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0005515|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.40|G3DSA:3.30.565.10|PF01590|PF02518|PR00344|PTHR24423|PTHR24423:SF445|SM00387|SSF47384|SSF55781|SSF55874 B2904_RS03940 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005839|IPR006467|IPR006638|IPR007197|IPR013848|IPR020612|IPR023404|IPR023970 Elongator protein 3/MiaB/NifB|Methylthiotransferase|Methylthiotransferase, N-terminal|Methylthiotransferase, conserved site|Methylthiotransferase/radical SAM-type protein|MiaB-like tRNA modifying enzyme|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0009451|GO:0016740|GO:0043412|GO:0051536|GO:0051539 G3DSA:3.80.30.20|PF00919|PF04055|PS01278|PTHR11918|PTHR11918:SF45|SM00729|SSF102114|TIGR00089|TIGR01579 B2904_RS03945 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000158|IPR003008|IPR008280|IPR018316|IPR024757 Cell division protein FtsZ|Cell division protein FtsZ, C-terminal|Tubulin/FtsZ, 2-layer sandwich domain|Tubulin/FtsZ, C-terminal|Tubulin/FtsZ, GTPase domain GO:0003924|GO:0005525 G3DSA:3.30.1330.20|G3DSA:3.40.50.1440|MF_00909|PF00091|PF12327|PR00423|PTHR30314|PTHR30314:SF3|SM00864|SM00865|SSF52490|SSF55307|TIGR00065 B2904_RS03950 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PTHR23083|SM00028|SSF48452 B2904_RS03955 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001977|IPR027417 Dephospho-CoA kinase|P-loop containing nucleoside triphosphate hydrolase GO:0004140|GO:0005524|GO:0015937 G3DSA:3.40.50.300|MF_00376|PF01121|PTHR10695|SSF52540|TIGR00152 B2904_RS03960 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007730 Sporulation-related domain GO:0042834 G3DSA:3.30.70.1070|PF05036|SSF110997 B2904_RS03965 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006638|IPR007197|IPR023404 Elongator protein 3/MiaB/NifB|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0051536 G3DSA:3.80.30.20|PF04055|PTHR11228|PTHR11228:SF26|SM00729|SSF102114 B2904_RS03970 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002495|IPR029044 Glycosyl transferase, family 8|Nucleotide-diphospho-sugar transferases GO:0016757 G3DSA:3.90.550.10|PF01501|SSF53448 B2904_RS03980 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000262|IPR013785|IPR013816|IPR016185 ATP-grasp fold, subdomain 2|Aldolase-type TIM barrel|FMN-dependent dehydrogenase|Pre-ATP-grasp domain GO:0003824|GO:0005524|GO:0016491 G3DSA:3.20.20.70|G3DSA:3.30.470.20|G3DSA:3.40.50.20|PF01070|PF13535|SM01209|SSF51395|SSF52440|SSF56059 B2904_RS03985 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR029787 Nucleotide cyclase G3DSA:3.30.70.270|SSF55073 B2904_RS03990 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011990|IPR013105|IPR019734 Tetratricopeptide repeat|Tetratricopeptide repeat 2|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF07719|PF13181|PTHR23083|SM00028|SSF48452 B2904_RS03995 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR021729|IPR025303 Domain of unknown function DUF3298|Domain of unknown function DUF4163 G3DSA:3.30.565.40|G3DSA:3.90.640.20|PF11738|PF13739 B2904_RS04005 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001440|IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide repeat 1|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF00515|SM00028|SSF48452 B2904_RS04010 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic SSF81665 B2904_RS04015 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001737|IPR011530|IPR020598|IPR023165|IPR029063 Ribosomal RNA adenine dimethylase|Ribosomal RNA adenine methylase transferase, N-terminal|Ribosomal RNA adenine methyltransferase KsgA/Erm|S-adenosyl-L-methionine-dependent methyltransferase|rRNA adenine dimethylase-like GO:0000154|GO:0000179|GO:0006364|GO:0008649 G3DSA:1.10.8.100|G3DSA:3.40.50.150|MF_00607|PF00398|PTHR11727|SM00650|SSF53335|TIGR00755 B2904_RS04025 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001697|IPR011037|IPR015793|IPR015794|IPR015795|IPR015806|IPR015813|IPR018209 Pyruvate kinase|Pyruvate kinase, C-terminal|Pyruvate kinase, active site|Pyruvate kinase, alpha/beta|Pyruvate kinase, barrel|Pyruvate kinase, beta-barrel insert domain|Pyruvate kinase-like, insert domain|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0000287|GO:0003824|GO:0004743|GO:0006096|GO:0030955 G3DSA:2.40.33.10|G3DSA:3.20.20.60|G3DSA:3.40.1380.20|PF00224|PF02887|PR01050|PS00110|PTHR11817|SSF50800|SSF51621|SSF52935|TIGR01064 B2904_RS04030 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002347|IPR011284|IPR016040|IPR020904 3-oxoacyl-(acyl-carrier-protein) reductase|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0004316|GO:0006633|GO:0016491|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|PTHR24322|PTHR24322:SF328|SM00822|SSF51735|TIGR01830 B2904_RS04035 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003231|IPR006162|IPR009081 Acyl carrier protein (ACP)|Phosphopantetheine attachment site|Phosphopantetheine binding ACP domain GO:0006633 G3DSA:1.10.1200.10|MF_01217|PD000887|PF00550|PS00012|PTHR20863|SSF47336|TIGR00517 B2904_RS04040 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR014030|IPR014031|IPR016039|IPR017568|IPR018201|IPR020841 3-oxoacyl-[acyl-carrier-protein] synthase 2|Beta-ketoacyl synthase, C-terminal|Beta-ketoacyl synthase, N-terminal|Beta-ketoacyl synthase, active site|Polyketide synthase, beta-ketoacyl synthase domain|Thiolase-like GO:0003824|GO:0006633|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00109|PF02801|PIRSF000447|PS00606|PTHR11712|SM00825|SSF53901|TIGR03150 B2904_RS04045 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002130|IPR024936|IPR029000 Cyclophilin-like domain|Cyclophilin-type peptidyl-prolyl cis-trans isomerase|Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 G3DSA:2.40.100.10|PF00160|PIRSF001467|PR00153|PTHR11071|SSF50891 B2904_RS04050 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002130|IPR020892|IPR024936|IPR029000 Cyclophilin-like domain|Cyclophilin-type peptidyl-prolyl cis-trans isomerase|Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain|Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0000413|GO:0003755|GO:0006457 G3DSA:2.40.100.10|PF00160|PR00153|PS00170|PTHR11071|SSF50891 B2904_RS04055 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic PTHR34700|PTHR34700:SF1 B2904_RS04065 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 MF_00358|PD005521|PF01165|PR00976|TIGR00030 B2904_RS04080 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002661|IPR023584 Ribosome recycling factor|Ribosome recycling factor domain GO:0006412 G3DSA:1.10.132.20|MF_00040|PF01765|PTHR20982|SSF55194|TIGR00496 B2904_RS04085 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001441|IPR018520 Decaprenyl diphosphate synthase-like|Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 G3DSA:3.40.1180.10|MF_01139|PF01255|PS01066|PTHR10291|SSF64005|TIGR00055 B2904_RS04090 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic PF01148|PTHR13773|PTHR13773:SF0 B2904_RS04100 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000189|IPR008258|IPR018392|IPR023346 LysM domain|Lysozyme-like domain|Prokaryotic transglycosylase, active site|Transglycosylase SLT domain 1 GO:0000270|GO:0008933|GO:0016020 G3DSA:1.10.530.10|G3DSA:3.10.350.10|PF01464|PF01476|PS00922|PTHR21666|PTHR21666:SF219|SM00257|SSF53955|SSF54106 B2904_RS04105 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005746|IPR012336|IPR013766|IPR017937 Thioredoxin|Thioredoxin domain|Thioredoxin, conserved site|Thioredoxin-like fold GO:0006662|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00085|PIRSF000077|PS00194|PTHR10438|SSF52833 B2904_RS04110 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007551 Protein of unknown function DUF520 G3DSA:3.30.70.860|G3DSA:3.30.70.990|MF_00632|PF04461|PTHR30476|PTHR30476:SF0|SSF89963 B2904_RS04115 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001296|IPR011835|IPR013534 Bacterial/plant glycogen synthase|Glycosyl transferase, family 1|Starch synthase, catalytic domain GO:0004373 G3DSA:3.40.50.2000|MF_00484|PF00534|PF08323|PTHR12526|PTHR12526:SF17|SSF53756|TIGR02095 B2904_RS04120 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic G3DSA:1.20.1070.10 B2904_RS04125 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001567|IPR004438|IPR013647|IPR024079 Metallopeptidase, catalytic domain|Oligopeptidase F, N-terminal domain|Peptidase M3A/M3B|Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508|GO:0008237 G3DSA:1.10.287.830|G3DSA:3.40.390.10|PF01432|PF08439|PTHR11804|PTHR11804:SF8|SSF55486|TIGR00181 B2904_RS04130 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002178|IPR007737|IPR011608|IPR011991|IPR016152 Mga helix-turn-helix domain|PRD domain|PTS EIIA type-2 domain|Phosphotransferase/anion transporter|Winged helix-turn-helix DNA-binding domain GO:0005215|GO:0006355|GO:0006810 G3DSA:1.10.10.10|G3DSA:1.10.1790.10|G3DSA:3.40.930.10|PF00359|PF05043|SSF46785|SSF55804|SSF63520 B2904_RS04135 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001996|IPR003352|IPR011301|IPR018113 PTS system, maltose/glucose-specific IIBC component|Phosphotransferase system EIIB, cysteine phosphorylation site|Phosphotransferase system, EIIC|Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401|GO:0016020 G3DSA:3.30.1360.60|PF00367|PF02378|PS01035|PTHR30009|PTHR30009:SF1|SSF55604|TIGR00826|TIGR02004 B2904_RS04140 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004839|IPR015421|IPR015422|IPR015424|IPR027619 Aminotransferase, class I/classII|Putative C-S lyase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PTHR11751|PTHR11751:SF361|SSF53383|TIGR04350 B2904_RS04145 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007829 TM2 domain PF05154|PTHR21016 B2904_RS04150 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR024445 ISXO2-like transposase domain PF12762|SM01126 B2904_RS04155 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005320|IPR029062 Class I glutamine amidotransferase-like|Peptidase S51 GO:0006508|GO:0008236 G3DSA:3.40.50.880|PF03575|PTHR20842|SSF52317 B2904_RS04160 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR012337 Ribonuclease H-like domain GO:0003676 G3DSA:3.30.420.10|SSF53098 B2904_RS04165 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR029470 PD-(D/E)XK nuclease superfamily 4 PF14281 B2904_RS04180 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002314|IPR002320|IPR004154|IPR012675|IPR012947|IPR018163 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Anticodon-binding|Beta-grasp domain|Threonine-tRNA ligase, class IIa|Threonyl/alanyl tRNA synthetase, SAD|Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166|GO:0004812|GO:0004829|GO:0005524|GO:0005737|GO:0006418|GO:0006435|GO:0016876|GO:0043039 G3DSA:3.10.20.30|G3DSA:3.30.54.20|G3DSA:3.30.930.10|G3DSA:3.30.980.10|G3DSA:3.40.50.800|MF_00184|PF00587|PF03129|PF07973|PR01047|PTHR11451|PTHR11451:SF31|SM00863|SSF52954|SSF55186|SSF55681|TIGR00418 B2904_RS04185 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001288|IPR019813|IPR019814|IPR019815 Translation initiation factor 3|Translation initiation factor 3, C-terminal|Translation initiation factor 3, N-terminal|Translation initiation factor 3, conserved site GO:0003743|GO:0006413 G3DSA:3.10.20.80|G3DSA:3.30.110.10|MF_00080|PF00707|PF05198|PS00938|PTHR10938|SSF54364|SSF55200|TIGR00168 B2904_RS04190 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001706|IPR018265|IPR021137 Ribosomal protein L35|Ribosomal protein L35, conserved site|Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00514|PF01632|PR00064|PS00936|SSF143034|TIGR00001 B2904_RS04195 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 G3DSA:1.10.1900.20|MF_00382|PD002389|PF00453|PR00062|PTHR10986|PTHR10986:SF12|SSF74731|TIGR01032 B2904_RS04210 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000358|IPR009078|IPR012348 Ferritin-like superfamily|Ribonucleotide reductase small subunit|Ribonucleotide reductase-related GO:0009186|GO:0016491|GO:0055114 G3DSA:1.10.620.20|PF00268|SSF47240 B2904_RS04215 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 PF01758|PTHR10361 B2904_RS04220 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000581|IPR004404|IPR015928|IPR020558 Aconitase/3-isopropylmalate dehydratase, swivel|Dihydroxy-acid dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0004160|GO:0008152|GO:0009082 MF_00012|PF00920|PS00886|PS00887|PTHR21000|PTHR21000:SF11|SSF143975|SSF52016|TIGR00110 B2904_RS04225 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001519|IPR008331|IPR009078|IPR012347 Ferritin|Ferritin-like superfamily|Ferritin-related|Ferritin/DPS protein domain GO:0006826|GO:0006879|GO:0008199 G3DSA:1.20.1260.10|PF00210|PTHR11431|PTHR11431:SF4|SSF47240 B2904_RS04230 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR026816|IPR029039 Flavodoxin domain|Flavoprotein-like domain G3DSA:3.40.50.360|PF12724|SSF52218 B2904_RS04235 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002937|IPR023753 Amine oxidase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01593|PR00420|PTHR10668|SSF51905 B2904_RS04240 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR019223 Domain of unknown function DUF2147 PF09917|PTHR36919 B2904_RS04255 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 G3DSA:1.10.287.950|PF00015|PTHR32089|SM00283|SSF58104 B2904_RS04260 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000194|IPR000793|IPR003593|IPR004100|IPR005722|IPR020003|IPR024034|IPR027417 AAA+ ATPase domain|ATPase, F1 complex alpha/beta subunit, N-terminal domain|ATPase, F1 complex beta subunit/V1 complex, C-terminal|ATPase, F1 complex, beta subunit|ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015986|GO:0015991|GO:0015992|GO:0016820|GO:0033178|GO:0046034|GO:0046933 G3DSA:1.10.1140.10|G3DSA:2.40.10.170|G3DSA:3.40.50.300|MF_01347|PF00006|PF02874|PS00152|PTHR15184|PTHR15184:SF8|SM00382|SSF47917|SSF50615|SSF52540|TIGR01039 B2904_RS04270 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003399 Mce/MlaD PF02470|PTHR33371 B2904_RS04275 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF567|SM00382|SSF52540 B2904_RS04280 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001250|IPR011051|IPR014628|IPR014710 Mannose-6-phosphate isomerase, Firmicutes type, short form|Mannose-6-phosphate isomerase, type I|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0004476|GO:0005975|GO:0008270 G3DSA:2.60.120.10|PF01238|PIRSF036894|PTHR18964|PTHR18964:SF114|SSF51182 B2904_RS04285 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002085|IPR002328|IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|Alcohol dehydrogenase, zinc-type, conserved site|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PS00059|PTHR11695|PTHR11695:SF429|SM00829|SSF50129|SSF51735 B2904_RS04290 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001412|IPR002300|IPR002302|IPR009008|IPR009080|IPR013155|IPR014729|IPR015413|IPR025709 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia|Leucine-tRNA ligase|Leucyl-tRNA synthetase, editing domain|Methionyl/Leucyl tRNA synthetase|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold|Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0000166|GO:0002161|GO:0004812|GO:0004823|GO:0005524|GO:0006418|GO:0006429 G3DSA:1.10.730.10|G3DSA:3.40.50.620|G3DSA:3.90.740.10|MF_00049_B|PF00133|PF08264|PF09334|PF13603|PR00985|PS00178|PTHR11946|PTHR11946:SF7|SSF47323|SSF50677|SSF52374|TIGR00396 B2904_RS04295 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR021533 Putative beta-lactamase-inhibitor-like, PepSY-like PF11396|SSF160574 B2904_RS04305 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002110|IPR020683 Ankyrin repeat|Ankyrin repeat-containing domain GO:0005515 G3DSA:1.25.40.20|PF00023|PTHR24182|PTHR24182:SF13|SSF48403 B2904_RS04310 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001440|IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide repeat 1|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF00515|PF13414|PTHR23083|SM00028|SSF48439 B2904_RS04315 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PTHR30290|PTHR30290:SF10|SSF53850 B2904_RS04320 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002085|IPR002328|IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|Alcohol dehydrogenase, zinc-type, conserved site|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PS00059|PTHR11695|PTHR11695:SF261|SM00829|SSF50129|SSF51735 B2904_RS04325 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PTHR30290|PTHR30290:SF10|SSF53850 B2904_RS04335 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PTHR11751|PTHR11751:SF362|SM00345|SM00895|SSF46785|SSF48008 B2904_RS04340 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004682|IPR018389 TRAP transporter solute receptor DctP/TeaA|TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 PF03480|PIRSF006470|PTHR33376|PTHR33376:SF2|SSF53850|TIGR00787 B2904_RS04345 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290|PTHR35011|PTHR35011:SF2 B2904_RS04350 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004681|IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein GO:0016021 PF06808|PIRSF006066|PTHR33362|PTHR33362:SF2|TIGR00786 B2904_RS04355 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000322|IPR011013|IPR017853|IPR025887|IPR032513 Alpha-glucosidase, domain of unknown function DUF4968|Galactose mutarotase-like domain|Glycoside hydrolase family 31|Glycoside hydrolase family 31, N-terminal domain|Glycoside hydrolase superfamily GO:0003824|GO:0004553|GO:0005975|GO:0030246 PF01055|PF13802|PF16338|PTHR22762|PTHR22762:SF7|SSF51011|SSF51445|SSF74650 B2904_RS04360 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic G3DSA:2.40.160.40 B2904_RS04365 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006101|IPR006102|IPR006103|IPR006104|IPR008979|IPR013781|IPR013812|IPR017853|IPR023230|IPR023232 Galactose-binding domain-like|Glycoside hydrolase family 2, catalytic domain|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 2|Glycoside hydrolase, family 2, active site|Glycoside hydrolase, family 2, conserved site|Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich|Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain|Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 G3DSA:2.60.120.260|G3DSA:2.60.40.320|G3DSA:3.20.20.80|PF00703|PF02836|PF02837|PR00132|PS00608|PS00719|PTHR10066|PTHR10066:SF67|SSF49303|SSF49785|SSF51445 B2904_RS04370 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR020846 Major facilitator superfamily domain G3DSA:1.20.1250.20|PF13347|PTHR11328|SSF103473 B2904_RS04375 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR008927|IPR013118|IPR013131|IPR013328|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|Mannitol dehydrogenase, C-terminal|Mannitol dehydrogenase, N-terminal|NAD(P)-binding domain GO:0016491|GO:0050662|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF01232|PF08125|PTHR30562|PTHR30562:SF6|SSF48179|SSF51735 B2904_RS04380 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004628|IPR013022 Mannonate dehydratase|Xylose isomerase-like, TIM barrel domain GO:0006064|GO:0008927 G3DSA:3.20.20.150|MF_00106|PF03786|PIRSF016049|PTHR30387|PTHR30387:SF2|SSF51658|TIGR00695 B2904_RS04385 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003766|IPR023177|IPR032466 Metal-dependent hydrolase|Uronate isomerase|Uronate isomerase, domain 2 GO:0006064|GO:0008880 G3DSA:1.10.2020.10|G3DSA:3.20.20.140|MF_00675|PF02614|PTHR30068|PTHR30068:SF4|SSF51556 B2904_RS04390 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000887|IPR013785 Aldolase-type TIM barrel|KDPG/KHG aldolase GO:0003824|GO:0008152|GO:0016829 G3DSA:3.20.20.70|PF01081|PTHR30246|PTHR30246:SF0|SSF51569|TIGR01182 B2904_RS04400 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004518|IPR011551 NTP pyrophosphohydrolase MazG|NTP pyrophosphohydrolase MazG, putative catalytic core G3DSA:1.10.287.1080|PF03819|PTHR30522|PTHR30522:SF0|SSF101386|TIGR00444 B2904_RS04405 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002549 Transmembrane protein TqsA-like PF01594|PTHR21716|PTHR21716:SF13 B2904_RS04410 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 G3DSA:3.40.50.2000|PF01075|PTHR30160|PTHR30160:SF7|SSF53756 B2904_RS04415 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR019079|IPR029052 Capsule synthesis protein, CapA|Metallo-dependent phosphatase-like G3DSA:3.60.21.30|PF09587|PTHR33393|PTHR33393:SF2|SM00854|SSF56300 B2904_RS04420 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000644|IPR002550|IPR005170|IPR016166|IPR016169 CBS domain|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|Domain of unknown function DUF21|FAD-binding, type 2|Transporter-associated domain GO:0003824|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.10.580.10|G3DSA:3.30.465.10|PF00571|PF01595|PF03471|PTHR22777|SM01091|SSF54631|SSF56176 B2904_RS04425 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 G3DSA:3.40.80.10|PF01510|SM00644|SSF55846 B2904_RS04430 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR028051|IPR028976 CheC-like domain|Chemotaxis phosphatase CheX-like domain G3DSA:3.40.1550.10|PF13690|PTHR39452|PTHR39452:SF1|SSF103039 B2904_RS04445 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005490 L,D-transpeptidase catalytic domain GO:0016740 G3DSA:2.40.440.10|PF03734|PTHR36699|SSF141523 B2904_RS04450 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic G3DSA:1.10.287.950|SSF58104 B2904_RS04455 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002645 STAS domain G3DSA:3.30.750.24|SSF52091 B2904_RS04460 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|SM00448|SSF52172 B2904_RS04465 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002545|IPR003594|IPR003661|IPR004105|IPR004358|IPR008207 CheW-like domain|Histidine kinase CheA-like, homodimeric domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0000160|GO:0004673|GO:0004871|GO:0005737|GO:0006935|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.560|G3DSA:1.20.120.160|G3DSA:2.30.30.40|G3DSA:2.40.50.180|G3DSA:3.30.565.10|PF01584|PF01627|PF02518|PF02895|PR00344|PTHR22617|PTHR22617:SF20|SM00073|SM00260|SM00387|SM01231|SSF47226|SSF47384|SSF50341|SSF55874 B2904_RS04470 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 G3DSA:2.30.30.40|G3DSA:2.40.50.180|PF01584|PTHR22617|SM00260|SSF50341 B2904_RS04475 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000780|IPR022641|IPR022642|IPR026024|IPR029063 Chemotaxis protein methyltransferase CheR|Chemotaxis receptor methyltransferase CheR, N-terminal|MCP methyltransferase, CheR-type|MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal|S-adenosyl-L-methionine-dependent methyltransferase GO:0008757 G3DSA:1.10.155.10|G3DSA:3.40.50.150|PF01739|PF03705|PIRSF000410|PR00996|PTHR24422|PTHR24422:SF13|SM00138|SSF47757|SSF53335 B2904_RS04480 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005659|IPR011324 Chemoreceptor glutamine deamidase CheD|Cytotoxic necrotizing factor-like, catalytic GO:0006935|GO:0050568 MF_01440|PF03975|PTHR35147|PTHR35147:SF2|SSF64438 B2904_RS04485 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000673|IPR001789|IPR008248|IPR011006 CheY-like superfamily|Signal transduction response regulator, chemotaxis, CheB|Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase|Signal transduction response regulator, receiver domain GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 G3DSA:3.40.50.180|G3DSA:3.40.50.2300|MF_00099|PF00072|PF01339|PIRSF000876|PTHR24421|PTHR24421:SF4|SM00448|SSF52172|SSF52738 B2904_RS04495 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000905|IPR017860|IPR017861|IPR022450 Gcp-like domain|Kae1/TsaD family|Peptidase M22, conserved site|tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 G3DSA:3.30.420.40|MF_01445|PF00814|PR00789|PS01016|PTHR11735|PTHR11735:SF6|SSF53067|TIGR00329|TIGR03723 B2904_RS04500 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001440|IPR006597|IPR011990|IPR019734 Sel1-like repeat|Tetratricopeptide repeat|Tetratricopeptide repeat 1|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF00515|PF13181|PF13414|PTHR23083|SM00028|SM00671|SSF48452 B2904_RS04505 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|SM00382|SSF52540 B2904_RS04510 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30151|SSF161098 B2904_RS04520 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004642|IPR005130|IPR005656 MmgE/PrpD|Serine dehydratase, alpha subunit|Serine dehydratase-like, alpha subunit GO:0003941|GO:0006094|GO:0016829 PF03313|PTHR30182|SSF103378|TIGR00718 B2904_RS04525 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002912|IPR004643|IPR005131|IPR029009 ACT domain|Allosteric substrate binding domain|Iron-sulphur-dependent L-serine dehydratase beta subunit|Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0008152|GO:0016597|GO:0051539 G3DSA:3.30.1330.90|G3DSA:3.30.70.260|PF01842|PF03315|PIRSF036692|PTHR30182|PTHR30182:SF2|SSF143548|SSF55021|TIGR00719 B2904_RS04530 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002104|IPR004107|IPR011010|IPR011932|IPR013762|IPR023009|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, SAM-like, N-terminal|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Tyrosine recombinase XerC/XerD|Tyrosine recombinase XerD GO:0003677|GO:0006310|GO:0009009|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|MF_01808|PF00589|PF02899|PTHR30349|PTHR30349:SF5|SSF56349|TIGR02225 B2904_RS04545 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001537|IPR016914|IPR029026|IPR029028 Alpha/beta knot methyltransferases|tRNA (cytidine/uridine-2'-O-)-methyltransferase|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0001510|GO:0003723|GO:0006396|GO:0008168|GO:0008173 G3DSA:3.40.1280.10|MF_01885|PF00588|PIRSF029256|PTHR12029|PTHR12029:SF31|SSF75217 B2904_RS04550 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF02518|PR00344|PTHR24423|SM00387|SM00388|SSF47384|SSF55874 B2904_RS04555 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF614|SM00448|SM00862|SSF46894|SSF52172 B2904_RS04560 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006004|IPR009051|IPR016040|IPR023753|IPR028261 Alpha-helical ferredoxin|Dihydroprymidine dehydrogenase domain II|FAD/NAD(P)-binding domain|Glutamate synthase (NADPH), homotetrameric|NAD(P)-binding domain GO:0016491|GO:0051536|GO:0055114 G3DSA:1.10.1060.10|G3DSA:3.40.50.720|G3DSA:3.50.50.60|PF07992|PF14691|PR00368|PR00411|PTHR11938|PTHR11938:SF90|SSF46548|SSF51971|TIGR01316 B2904_RS04565 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006342|IPR029063 Methyltransferase FkbM|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF05050|PTHR34203|PTHR34203:SF1|SSF53335|TIGR01444 B2904_RS04570 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004300|IPR011330|IPR021923|IPR027291 Glycoside hydrolase 38/57, N-terminal domain|Glycoside hydrolase family 57, N-terminal domain|Glycoside hydrolase/deacetylase, beta/alpha-barrel|Protein of unknown function DUF3536 GO:0003824|GO:0005975 G3DSA:3.20.110.10|PF03065|PF12055|SSF88713 B2904_RS04580 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007359|IPR026268 Positive regulator of sigma(E), RseC/MucC|Protein RseC PF04246|PIRSF004923 B2904_RS04585 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 G3DSA:1.10.3860.10|PF00375|PR00173|PTHR11958|PTHR11958:SF61|SSF118215 B2904_RS04590 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004839|IPR015421|IPR015422|IPR015424|IPR027619 Aminotransferase, class I/classII|Putative C-S lyase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PTHR11751|PTHR11751:SF21|SSF53383|TIGR04350 B2904_RS04595 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR013559 YheO-like PD037769|PF08348|PF13309|PTHR35568|PTHR35568:SF3 B2904_RS04600 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 G3DSA:1.10.3860.10|PF00375|PR00173|PTHR11958|PTHR11958:SF61|SSF118215 B2904_RS04605 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004155|IPR011989|IPR016024 Armadillo-like helical|Armadillo-type fold|PBS lyase HEAT-like repeat GO:0005488 G3DSA:1.25.10.10|PF13646|SM00567|SSF48371 B2904_RS04610 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000032|IPR004701|IPR008279|IPR008731 PEP-utilising enzyme, mobile domain|Phosphocarrier HPr protein-like|Phosphotransferase system, enzyme I N-terminal|Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.274.10|G3DSA:3.30.1340.10|G3DSA:3.40.50.510|G3DSA:3.50.30.10|PF00381|PF00391|PF03610|PF05524|PTHR38594|SSF47831|SSF52009|SSF53062|SSF55594 B2904_RS04615 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002110|IPR020683 Ankyrin repeat|Ankyrin repeat-containing domain GO:0005515 G3DSA:1.25.40.20|PF12796|PR01415|PTHR24193|SM00248|SSF48403 B2904_RS04625 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002110|IPR020683 Ankyrin repeat|Ankyrin repeat-containing domain GO:0005515 G3DSA:1.25.40.20|PF12796|PTHR24198|SM00248|SSF48403 B2904_RS04630 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001509|IPR005886|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain|UDP-glucose 4-epimerase GalE GO:0003824|GO:0003978|GO:0006012|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|PTHR10366|PTHR10366:SF39|SSF51735|TIGR01179 B2904_RS04635 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001537|IPR004441|IPR029026|IPR029028|IPR029064 50S ribosomal protein L30e-like|Alpha/beta knot methyltransferases|RNA methyltransferase TrmH family|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 G3DSA:3.30.1330.30|G3DSA:3.40.1280.10|PF00588|PTHR12029|SSF75217|TIGR00186 B2904_RS04645 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR010539 Protein of unknown function UCP009160 PF12811|PIRSF009160|PTHR41282|PTHR41282:SF1 B2904_RS04650 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13302|PTHR13256|PTHR13256:SF10|SSF55729 B2904_RS04655 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000092|IPR008949|IPR017446 Isoprenoid synthase domain|Polyprenyl synthetase|Polyprenyl synthetase-related GO:0008299 G3DSA:1.10.600.10|PF00348|PS00444|PS00723|PTHR12001|PTHR12001:SF23|SSF48576 B2904_RS04670 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004254|IPR005744 AdipoR/Haemolysin-III-related|Hly-III GO:0016021|GO:0019835 PF03006|PTHR20855|PTHR20855:SF3|TIGR01065 B2904_RS04680 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006439|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain GO:0008152|GO:0016787 G3DSA:3.40.50.1000|PF13419|PTHR18901|SSF56784|TIGR01509 B2904_RS04685 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002052|IPR003356|IPR029063|IPR029464 DNA methylase, N-6 adenine-specific, conserved site|DNA methylase, adenine-specific|S-adenosyl-L-methionine-dependent methyltransferase|Type I restriction enzyme R protein, N-terminal domain GO:0003676|GO:0003677|GO:0006306|GO:0008168|GO:0008170|GO:0032259 G3DSA:3.40.50.150|PF02384|PF13588|PR00507|PS00092|PTHR30195|PTHR30195:SF2|SSF53335 B2904_RS04695 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 PF01420|PTHR30408|PTHR30408:SF2|SSF116734 B2904_RS04700 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SSF48452 B2904_RS04710 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR025665 Outer membrane protein beta-barrel domain PF13568 B2904_RS04730 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic G3DSA:2.60.120.380|SSF89260 B2904_RS04740 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR008309 Uncharacterised conserved protein UCP025560 PF07027 B2904_RS04745 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR010280|IPR012340|IPR029063|IPR030390 (Uracil-5)-methyltransferase family|Nucleic acid-binding, OB-fold|RNA methyltransferase TrmA, active site|S-adenosyl-L-methionine-dependent methyltransferase GO:0006396|GO:0008173 G3DSA:2.40.50.140|G3DSA:3.40.50.150|PF05958|PS01230|PTHR11061|PTHR11061:SF30|SSF50249|SSF53335 B2904_RS04750 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF12706|PTHR12553|PTHR12553:SF7|SM00849|SSF56281 B2904_RS04755 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001996|IPR003352|IPR010974|IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site|Phosphotransferase system, EIIC|Phosphotransferase system, IIB component, type 1|Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016020|GO:0016021|GO:0019866 G3DSA:3.30.1360.60|PF00367|PF02378|PS01035|PTHR30009|PTHR30009:SF4|SSF55604|TIGR00826|TIGR01998 B2904_RS04760 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001093|IPR005990|IPR013785|IPR015875 Aldolase-type TIM barrel|IMP dehydrogenase / GMP reductase, conserved site|IMP dehydrogenase/GMP reductase|Inosine-5'-monophosphate dehydrogenase GO:0003824|GO:0003938|GO:0006164|GO:0016491|GO:0055114 G3DSA:3.20.20.70|PF00478|PS00487|PTHR11911|PTHR11911:SF6|SM01240|SSF51412 B2904_RS04765 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001576|IPR015824|IPR015901|IPR015911 Phosphoglycerate kinase|Phosphoglycerate kinase, C-terminal|Phosphoglycerate kinase, N-terminal|Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 G3DSA:3.40.50.1260|G3DSA:3.40.50.1270|MF_00145|PF00162|PIRSF000724|PR00477|PS00111|PTHR11406|SSF53748 B2904_RS04770 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006424|IPR016040|IPR020828|IPR020829|IPR020830|IPR020831 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain|Glyceraldehyde 3-phosphate dehydrogenase, active site|Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain|Glyceraldehyde-3-phosphate dehydrogenase, type I|Glyceraldehyde/Erythrose phosphate dehydrogenase family|NAD(P)-binding domain GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF00044|PF02800|PIRSF000149|PR00078|PS00071|PTHR10836|PTHR10836:SF31|SM00846|SSF51735|SSF55347|TIGR01534 B2904_RS04780 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR022742|IPR029058 Alpha/Beta hydrolase fold|Serine aminopeptidase, S33 G3DSA:3.40.50.1820|PF12146|PTHR12277|PTHR12277:SF68|SSF53474 B2904_RS04790 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004394 Protein Iojap/ribosomal silencing factor RsfS G3DSA:3.30.460.10|MF_01477|PF02410|PTHR21043|SSF81301|TIGR00090 B2904_RS04795 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004474|IPR027381 Cell envelope-related transcriptional attenuator domain|Putative LytR/CpsA/Psr regulator, C-terminal domain PF03816|PF13399 B2904_RS04810 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002579|IPR011057|IPR028427 Mss4-like|Peptide methionine sulfoxide reductase|Peptide methionine sulphoxide reductase MrsB GO:0006979|GO:0016671|GO:0030091|GO:0033743|GO:0055114 G3DSA:2.170.150.20|PF01641|PTHR10173|PTHR10173:SF19|SSF51316|TIGR00357 B2904_RS04815 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006037|IPR006153|IPR030151 Cation/H+ exchanger|K(+)/H(+) antiporter NhaP|Regulator of K+ conductance, C-terminal GO:0005451|GO:0006812|GO:0006813|GO:0008324|GO:0015299|GO:0016021|GO:0055085 G3DSA:3.30.70.1450|PF00999|PF02080|PTHR32507|PTHR32507:SF7|SSF116726 B2904_RS04820 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001844|IPR002423|IPR018370|IPR027409|IPR027413 Chaperonin Cpn60|Chaperonin Cpn60, conserved site|Chaperonin Cpn60/TCP-1 family|GroEL-like apical domain|GroEL-like equatorial domain GO:0005524|GO:0005737|GO:0006457|GO:0042026 G3DSA:1.10.560.10|G3DSA:3.50.7.10|MF_00600|PF00118|PR00298|PS00296|PTHR11353|SSF48592|SSF52029|SSF54849|TIGR02348 B2904_RS04825 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|PTHR10545|SSF55729 B2904_RS04830 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000933|IPR013781|IPR017853 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 29 GO:0004560|GO:0005975 G3DSA:3.20.20.80|PF01120|PTHR10030|PTHR10030:SF28|SM00812|SSF51445 B2904_RS04835 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003607|IPR004087|IPR004088|IPR006674|IPR006675|IPR017705|IPR022711|IPR028987 F-type ATP synthase subunit B-like, membrane domain|HD domain|HD/PDEase domain|HDIG domain|K Homology domain|K Homology domain, type 1|Ribonuclease Y|Ribonuclease Y, N-terminal GO:0003676|GO:0003723|GO:0006402|GO:0016020 G3DSA:1.10.3210.10|G3DSA:1.20.5.620|G3DSA:3.30.1370.10|MF_00335|PF00013|PF01966|PF12072|PTHR12826|SM00322|SM00471|SSF109604|SSF54791|TIGR00277|TIGR03319 B2904_RS04840 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005235|IPR029052 Metallo-dependent phosphatase-like|Metallophosphoesterase, YmdB-like G3DSA:3.60.21.30|PF13277|PIRSF004789|PTHR36303|PTHR36303:SF1|SSF56300|TIGR00282 B2904_RS04855 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003607|IPR005249|IPR006674 Conserved hypothetical protein CHP00488|HD domain|HD/PDEase domain G3DSA:1.10.3210.10|PF01966|PTHR35795|SM00471|SSF109604|TIGR00488 B2904_RS04860 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005225|IPR006073|IPR016496|IPR025121|IPR027417|IPR032305 GTP binding domain|GTP-binding protein, middle domain|GTPase HflX|GTPase HflX, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain GO:0005525 G3DSA:3.40.50.300|MF_00900|PF01926|PF13167|PF16360|PIRSF006809|PR00326|PTHR10229|PTHR10229:SF0|SSF52540|TIGR00231|TIGR03156 B2904_RS04865 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002314|IPR002316|IPR004154|IPR004500|IPR007214|IPR023717 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Anticodon-binding|Proline-tRNA ligase, class IIa|Prolyl-tRNA synthetase, class IIa, bacterial-type|Prolyl-tRNA synthetase, class IIa, type 1|YbaK/aminoacyl-tRNA synthetase-associated domain GO:0000166|GO:0002161|GO:0004812|GO:0004827|GO:0005524|GO:0005737|GO:0006418|GO:0006433 G3DSA:3.30.930.10|G3DSA:3.40.50.800|G3DSA:3.90.960.10|MF_01569|PF00587|PF03129|PF04073|PR01046|PTHR11451|PTHR11451:SF3|SSF52954|SSF55681|SSF55826|TIGR00409 B2904_RS04870 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13673|PTHR23091|PTHR23091:SF122|SSF55729 B2904_RS04875 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005495 Permease LptG/LptF-related GO:0016021 PF03739|PTHR33529 B2904_RS04880 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR018708 Protein of unknown function DUF2225 PF09986 B2904_RS04890 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001451|IPR011004|IPR025877|IPR029044 Hexapeptide repeat|MobA-like NTP transferase|Nucleotide-diphospho-sugar transferases|Trimeric LpxA-like G3DSA:2.160.10.10|G3DSA:3.90.550.10|PF00132|PF12804|PTHR22572|PTHR22572:SF115|SSF51161|SSF53448 B2904_RS04900 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000489|IPR003726|IPR003759|IPR006158|IPR011005|IPR011822 Cobalamin (vitamin B12)-binding domain|Cobalamin (vitamin B12)-binding module, cap domain|Cobalamin-dependent methionine synthase|Dihydropteroate synthase-like|Homocysteine-binding domain|Pterin-binding domain GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419|GO:0042558|GO:0044237|GO:0046872 G3DSA:1.10.1240.10|G3DSA:3.20.20.20|G3DSA:3.20.20.330|G3DSA:3.40.50.280|PF00809|PF02310|PF02574|PF02607|PIRSF000381|PTHR21091|PTHR21091:SF97|SM01018|SSF47644|SSF51717|SSF52242|SSF82282 B2904_RS04905 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 G3DSA:3.10.196.10|PF02965|SSF56507 B2904_RS04910 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 G3DSA:3.40.10.10|SSF57884 B2904_RS04915 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003171|IPR029041 FAD-linked oxidoreductase-like|Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 G3DSA:3.20.20.220|PF02219|SSF51730 B2904_RS04920 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000150|IPR006379|IPR023214 Cof protein|HAD-like domain|HAD-superfamily hydrolase, subfamily IIB GO:0016787 G3DSA:3.30.1240.10|G3DSA:3.40.50.1000|PF08282|PS01228|PTHR10000|PTHR10000:SF8|SSF56784|TIGR00099|TIGR01484 B2904_RS04925 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001754|IPR011060|IPR013785 Aldolase-type TIM barrel|Orotidine 5'-phosphate decarboxylase domain|Ribulose-phosphate binding barrel GO:0003824|GO:0004590|GO:0006207|GO:0008152 G3DSA:3.20.20.70|PF00215|PTHR35039|PTHR35039:SF2|SM00934|SSF51366 B2904_RS04930 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001303 Class II aldolase/adducin N-terminal G3DSA:3.40.225.10|PF00596|PTHR22789|PTHR22789:SF8|SM01007|SSF53639 B2904_RS04935 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004560|IPR013022 L-ribulose-5-phosphate 3-epimerase|Xylose isomerase-like, TIM barrel domain GO:0005975|GO:0016861 G3DSA:3.20.20.150|PF01261|PTHR12110|PTHR12110:SF20|SSF51658|TIGR00542 B2904_RS04940 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 G3DSA:3.40.50.270|PF02302|SSF52794 B2904_RS04945 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 PF03611|PTHR33843|PTHR33843:SF5 B2904_RS04955 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002178|IPR016152 PTS EIIA type-2 domain|Phosphotransferase/anion transporter GO:0005215|GO:0006810 G3DSA:3.40.930.10|PF00359|PTHR36203|SSF55804 B2904_RS04960 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|PIRSF006603|PTHR11206|PTHR11206:SF132|TIGR00797 B2904_RS04965 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011989 Armadillo-like helical G3DSA:1.25.10.10 B2904_RS04970 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002586|IPR025501|IPR027417 ATP binding protein MinD|CobQ/CobB/MinD/ParA nucleotide binding domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF01656|PIRSF003092|PTHR13696|PTHR13696:SF3|SSF52540 B2904_RS04980 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005325 Protein of unknown function DUF308, membrane PF03729 B2904_RS04985 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000573|IPR001030|IPR006248|IPR015928|IPR015931|IPR015932|IPR015937|IPR018136 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain|Aconitase family, 4Fe-4S cluster binding site|Aconitase, mitochondrial-like|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2|Aconitase/3-isopropylmalate dehydratase, swivel|Aconitase/isopropylmalate dehydratase GO:0003994|GO:0006099|GO:0008152|GO:0051539 G3DSA:3.20.19.10|G3DSA:3.30.499.10|G3DSA:3.40.1060.10|PF00330|PF00694|PR00415|PS00450|PS01244|PTHR11670|PTHR11670:SF30|SSF52016|SSF53732|TIGR01340 B2904_RS04990 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001804|IPR004439|IPR019818|IPR024084 Isocitrate and isopropylmalate dehydrogenases family|Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic|Isocitrate/isopropylmalate dehydrogenase, conserved site|Isopropylmalate dehydrogenase-like domain GO:0000287|GO:0004450|GO:0006099|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.718.10|PF00180|PS00470|PTHR11835|PTHR11835:SF52|SM01329|SSF53659|TIGR00183 B2904_RS04995 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002020|IPR016142|IPR024176 Citrate synthase|Citrate synthase, bacterial-type|Citrate synthase-like, large alpha subdomain GO:0046912 G3DSA:1.10.580.10|PF00285|PIRSF001369|PR00143|PTHR11739|PTHR11739:SF4|SSF48256 B2904_RS05005 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR027304 Trigger factor/SurA domain G3DSA:3.10.50.40|PF13623|SSF109998 B2904_RS05010 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002104|IPR004107|IPR011010|IPR013762|IPR023009|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, SAM-like, N-terminal|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Tyrosine recombinase XerC/XerD GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|MF_01808|PF00589|PF02899|PTHR30349|PTHR30349:SF5|SSF56349 B2904_RS05015 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001248|IPR030191 Cytosine permease|Purine-cytosine permease GO:0005215|GO:0015209|GO:0016020|GO:0016021|GO:0055085 PF02133|PTHR30569 B2904_RS05025 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002125|IPR016192|IPR016193 APOBEC/CMP deaminase, zinc-binding|Cytidine and deoxycytidylate deaminases, zinc-binding|Cytidine deaminase-like GO:0003824|GO:0008270|GO:0016787 G3DSA:3.40.140.10|PF00383|PS00903|PTHR11079|PTHR11079:SF69|SSF53927 B2904_RS05030 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF0|SSF82693|SSF82714|SSF82866 B2904_RS05035 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007163 Protein of unknown function DUF368 PF04018|PTHR37308 B2904_RS05045 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003848|IPR014729 Domain of unknown function DUF218|Rossmann-like alpha/beta/alpha sandwich fold G3DSA:3.40.50.620|PF02698|PTHR30336|PTHR30336:SF0 B2904_RS05050 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 PF03616 B2904_RS05055 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004821|IPR011914|IPR014729 Cytidyltransferase-like domain|RfaE bifunctional protein, domain II|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0005975|GO:0009058|GO:0016773|GO:0016779 G3DSA:3.40.50.620|PF01467|PTHR10739|PTHR10739:SF26|SSF52374|TIGR00125|TIGR02199 B2904_RS05065 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003170|IPR011601|IPR016166|IPR016167|IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|UDP-N-acetylenolpyruvoylglucosamine reductase|UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0003824|GO:0008762|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.30.43.10|G3DSA:3.30.465.10|MF_00037|PTHR21071|PTHR21071:SF4|SSF56176|SSF56194 B2904_RS05070 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007437 Putative member of DMT superfamily PF04342|PIRSF021239|PTHR38482 B2904_RS05075 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001932 PPM-type phosphatase domain GO:0003824 PF07228|PTHR21021|PTHR21021:SF19|SM00331|SSF81606 B2904_RS05085 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003141|IPR004013|IPR004805|IPR011708|IPR016195|IPR029460 Bacterial DNA polymerase III, alpha subunit|DNA polymerase III, alpha subunit|DNA polymerase, helix-hairpin-helix motif|PHP domain|Polymerase/histidinol phosphatase, N-terminal|Polymerase/histidinol phosphatase-like GO:0003677|GO:0003824|GO:0003887|GO:0006260|GO:0008408 G3DSA:1.10.150.280|G3DSA:3.20.20.140|PF02811|PF07733|PF14579|PTHR32294|PTHR32294:SF0|SM00481|SSF160975|SSF89550|TIGR00594 B2904_RS05090 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30465|PTHR30465:SF74|SSF161098 B2904_RS05095 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000515|IPR025966 ABC transporter type 1, transmembrane domain MetI-like|Oligopeptide transport permease C-like, N-terminal domain GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PF12911|PTHR30465|PTHR30465:SF75|SSF161098 B2904_RS05100 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|PTHR24220|PTHR24220:SF535|SM00382|SSF52540|TIGR01727 B2904_RS05105 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|PTHR24220|PTHR24220:SF336|SM00382|SSF52540|TIGR01727 B2904_RS05125 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003821|IPR013512|IPR013644|IPR016040|IPR026877 1-deoxy-D-xylulose 5-phosphate reductoisomerase|1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal|1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal|DXP reductoisomerase C-terminal domain|NAD(P)-binding domain GO:0005515|GO:0008299|GO:0030604|GO:0046872|GO:0055114|GO:0070402 G3DSA:1.10.1740.10|G3DSA:3.40.50.720|MF_00183|PF02670|PF08436|PF13288|PIRSF006205|PTHR30525|SSF51735|SSF55347|SSF69055|TIGR00243 B2904_RS05135 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000644|IPR003439|IPR003593|IPR005892|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|CBS domain|Glycine betaine transport ATP-binding subunit|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016020|GO:0016887|GO:0031460 G3DSA:3.10.580.10|G3DSA:3.40.50.300|PF00005|PF00571|PS00211|PTHR24220|PTHR24220:SF434|SM00116|SM00382|SSF52540|SSF54631|TIGR01186 B2904_RS05140 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain G3DSA:3.30.70.20|PF13237|PS00198|PTHR24960|PTHR24960:SF44|SSF54862 B2904_RS05145 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|PTHR24567|SM00100|SM00419|SSF46785|SSF51206 B2904_RS05150 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000944|IPR011991 Transcription regulator Rrf2-type|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF02082|PTHR33221|PTHR33221:SF5|SSF46785 B2904_RS05155 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011042 Six-bladed beta-propeller, TolB-like G3DSA:2.120.10.30|SSF101898 B2904_RS05160 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001015|IPR019772 Ferrochelatase|Ferrochelatase, active site GO:0004325|GO:0006783 G3DSA:3.40.50.1400|MF_00323|PF00762|PS00534|PTHR11108|PTHR11108:SF1|SSF53800|TIGR00109 B2904_RS05165 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000683|IPR016040 NAD(P)-binding domain|Oxidoreductase, N-terminal GO:0016491 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01408|PTHR22604|PTHR22604:SF105|SSF51735|SSF55347 B2904_RS05170 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR025406 Domain of unknown function DUF4132 PF13569 B2904_RS05175 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006555|IPR006935|IPR014001|IPR020891|IPR027417 ATP-dependent helicase, C-terminal|Helicase superfamily 1/2, ATP-binding domain|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Uncharacterised protein family UPF0758, conserved site GO:0003676|GO:0003677|GO:0005524|GO:0006139|GO:0008026|GO:0016787|GO:0016818 G3DSA:3.40.140.10|G3DSA:3.40.50.300|PF04851|PF13307|PS01302|PTHR11472|PTHR11472:SF37|SM00487|SM00491|SSF102712|SSF52540 B2904_RS05180 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR008257|IPR032466 Metal-dependent hydrolase|Renal dipeptidase family GO:0006508|GO:0016805 G3DSA:3.20.20.140|PF01244|PTHR10443|PTHR10443:SF12|SSF51556 B2904_RS05185 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004520|IPR005225|IPR006073|IPR018948|IPR025867|IPR027266|IPR027368|IPR027417 GTP binding domain|GTP-binding protein TrmE, N-terminal|GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1|MnmE, helical domain|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|tRNA modification GTPase MnmE|tRNA modification GTPase MnmE domain 2 GO:0003924|GO:0005515|GO:0005525|GO:0005622|GO:0006400 G3DSA:1.20.120.430|G3DSA:3.30.1360.120|G3DSA:3.40.50.300|MF_00379|PF01926|PF10396|PF12631|PTHR11649|PTHR11649:SF56|SSF103025|SSF116878|SSF52540|TIGR00231|TIGR00450 B2904_RS05195 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003442|IPR027417 P-loop containing nucleoside triphosphate hydrolase|tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 G3DSA:3.40.50.300|PF02367|PTHR33540|PTHR33540:SF2|SSF52540|TIGR00150 B2904_RS05200 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001608|IPR011078|IPR029066 Alanine racemase, N-terminal|PLP-binding barrel|Uncharacterised protein family UPF0001 G3DSA:3.20.20.10|PF01168|PIRSF004848|PS01211|PTHR10146|PTHR10146:SF0|SSF51419|TIGR00044 B2904_RS05210 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 B2904_RS05220 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000649|IPR011559|IPR027363 Initiation factor 2B alpha/beta/delta|Initiation factor 2B-related|Methylthioribose-1-phosphate isomerase-like, N-terminal domain GO:0044237|GO:0044249 G3DSA:1.20.120.420|G3DSA:3.40.50.10470|PF01008|PTHR10233|PTHR10233:SF6|SSF100950|TIGR00524 B2904_RS05245 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003593|IPR004504|IPR014721|IPR020568|IPR027417 AAA+ ATPase domain|DNA repair protein RadA|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0003684|GO:0005524|GO:0006281 G3DSA:3.30.230.10|G3DSA:3.40.50.300|PF13481|PF13541|PR01874|PTHR32472|PTHR32472:SF10|SM00382|SSF52540|SSF54211|TIGR00416 B2904_RS05250 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002505|IPR004614|IPR012147 Phosphate acetyl/butaryl transferase|Phosphate acetyl/butyryltransferase|Phosphate acetyltransferase GO:0008152|GO:0016407|GO:0016746 G3DSA:3.40.50.10750|PF01515|PIRSF000428|PTHR23406|PTHR23406:SF3|SSF53659|TIGR00651 B2904_RS05260 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000121|IPR006318|IPR008279|IPR008731|IPR015813|IPR023151|IPR024692 PEP-utilising enzyme, C-terminal|PEP-utilising enzyme, conserved site|PEP-utilising enzyme, mobile domain|Phosphotransferase system, enzyme I|Phosphotransferase system, enzyme I N-terminal|Phosphotransferase system, enzyme I-like|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0008965|GO:0009401|GO:0016310|GO:0016772 G3DSA:1.10.274.10|G3DSA:3.20.20.60|G3DSA:3.50.30.10|PF00391|PF02896|PF05524|PIRSF000732|PR01736|PS00742|PTHR22931|PTHR22931:SF28|SSF47831|SSF51621|SSF52009|TIGR01417 B2904_RS05265 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000845|IPR010049|IPR018017 MTA/SAH nucleosidase|Nucleoside phosphorylase|Nucleoside phosphorylase domain GO:0003824|GO:0008782|GO:0008930|GO:0009116|GO:0009164|GO:0019509 G3DSA:3.40.50.1580|PF01048|PTHR21234|PTHR21234:SF16|SSF53167|TIGR01704 B2904_RS05270 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003953|IPR015939|IPR023753 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain|Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 G3DSA:1.20.58.100|G3DSA:3.50.50.60|PF00890|PF02910|PR00368|PTHR11632|SSF46977|SSF51905 B2904_RS05275 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000845|IPR010049|IPR018017 MTA/SAH nucleosidase|Nucleoside phosphorylase|Nucleoside phosphorylase domain GO:0003824|GO:0008782|GO:0008930|GO:0009116|GO:0009164|GO:0019509 G3DSA:3.40.50.1580|PF01048|PTHR21234|PTHR21234:SF16|SSF53167|TIGR01704 B2904_RS05280 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011663|IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain|UbiC transcription regulator-associated GO:0003677|GO:0006355 G3DSA:3.40.1410.10|PF07702|SM00866|SSF64288 B2904_RS05285 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000524|IPR011991 Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF00392|PR00035|PTHR11751|PTHR11751:SF333|SM00345|SSF46785 B2904_RS05290 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001088|IPR015955|IPR016040|IPR022616 Glycoside hydrolase, family 4|Glycosyl hydrolase, family 4, C-terminal|Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal|NAD(P)-binding domain GO:0003824|GO:0004553|GO:0005975|GO:0016616|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.110.10|PF02056|PF11975|PR00732|PTHR32092|PTHR32092:SF7|SSF51735|SSF56327 B2904_RS05295 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001996|IPR003352|IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site|Phosphotransferase system, EIIC|Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401|GO:0016020 G3DSA:3.30.1360.60|PF00367|PF02378|PS01035|PTHR30009|PTHR30009:SF2|SSF55604 B2904_RS05300 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925|PTHR30269|PTHR30269:SF13 B2904_RS05310 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005837|IPR005838 Flagellar transport protein FliP|Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PF00813|PR00951|PR01302|PS01061|PTHR30587|PTHR30587:SF0|TIGR01103 B2904_RS05315 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002191|IPR006305 Bacterial export protein family 3|Flagellar biosynthesis protein FliQ GO:0009306|GO:0016020|GO:0016021|GO:0044780 PF01313|PIRSF004669|PR00952|PTHR34040|PTHR34040:SF2|TIGR01402 B2904_RS05320 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002010|IPR006303 Flagellar biosynthesis protein FliR|Type III secretion system inner membrane R protein GO:0006605|GO:0016020|GO:0016021|GO:0044780 PF01311|PR00953|PTHR30065|PTHR30065:SF1|TIGR01400 B2904_RS05325 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006135|IPR006136|IPR029025 Flagellar biosynthetic protein FlhB|Type III secretion system substrate exporter|Type III secretion system substrate exporter, C-terminal GO:0009306|GO:0015031|GO:0016020|GO:0016021|GO:0044780 G3DSA:3.40.1690.10|PF01312|PR00950|PTHR30531|PTHR30531:SF0|SSF160544|TIGR00328 B2904_RS05330 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PF00771|PIRSF005419|PR00949|PTHR30161|PTHR30161:SF1 B2904_RS05335 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000897|IPR003593|IPR020006|IPR027417 AAA+ ATPase domain|Flagellar biosynthesis protein FlhF|P-loop containing nucleoside triphosphate hydrolase|Signal recognition particle, SRP54 subunit, GTPase domain GO:0003924|GO:0005525|GO:0006614|GO:0044781 G3DSA:1.20.120.140|G3DSA:3.40.50.300|PF00448|PTHR11564|PTHR11564:SF3|SM00382|SM00962|SSF52540 B2904_RS05340 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002586|IPR025501|IPR027417 ATP binding protein MinD|CobQ/CobB/MinD/ParA nucleotide binding domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF01656|PIRSF003092|PTHR13696|PTHR13696:SF3|SSF52540 B2904_RS05350 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000943|IPR007624|IPR007627|IPR007630|IPR011991|IPR012845|IPR013324|IPR013325|IPR014284|IPR016263 RNA polymerase sigma factor, FliA/WhiG|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 3|RNA polymerase sigma-70 region 4|RNA polymerase sporulation-specific sigma factor|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0003899|GO:0006351|GO:0006352|GO:0006355|GO:0016987|GO:0030435 G3DSA:1.10.10.10|G3DSA:1.10.601.10|PF04539|PF04542|PF04545|PIRSF000770|PR00046|PS00716|PTHR30385|PTHR30385:SF7|SSF88659|SSF88946|TIGR02479|TIGR02937 B2904_RS05355 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005646|IPR032782 Jag, N-terminal|Protein of unknown function DUF342 G3DSA:3.30.30.80|PF03961|PTHR38032 B2904_RS05365 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR023198|IPR023214 HAD-like domain|Phosphoglycolate phosphatase, domain 2 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|PTHR18901|PTHR18901:SF23|SSF56784 B2904_RS05375 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000813|IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|7Fe ferredoxin GO:0009055 G3DSA:3.30.70.20|PF00037|PR00354|PS00198|PTHR24960|SSF54862 B2904_RS05380 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002550|IPR005170|IPR016166|IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|Domain of unknown function DUF21|FAD-binding, type 2|Transporter-associated domain GO:0003824|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.10.580.10|G3DSA:3.30.465.10|PF01595|PF03471|PTHR22777|PTHR22777:SF8|SM01091|SSF54631|SSF56176 B2904_RS05385 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000398|IPR020940|IPR023451 Thymidylate synthase|Thymidylate synthase, active site|Thymidylate synthase/dCMP hydroxymethylase domain GO:0004799|GO:0006231 G3DSA:3.30.572.10|MF_00008|PF00303|PR00108|PS00091|PTHR11548|SSF55831|TIGR03284 B2904_RS05395 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR019045 Restriction endonuclease, type II, TdeIII GO:0003677|GO:0009036|GO:0009307 PF09520 B2904_RS05400 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001796|IPR012259|IPR017925|IPR024072 Dihydrofolate reductase|Dihydrofolate reductase conserved site|Dihydrofolate reductase domain|Dihydrofolate reductase-like domain GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 G3DSA:3.40.430.10|PF00186|PR00070|PS00075|PTHR22778|PTHR22778:SF16|SSF53597 B2904_RS05405 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011059|IPR013108|IPR032466 Amidohydrolase 3|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF07969|PTHR22642|PTHR22642:SF2|SSF51338|SSF51556 B2904_RS05410 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006357|IPR023214|IPR023215 HAD-like domain|HAD-superfamily hydrolase, subfamily IIA|Nitrophenylphosphatase-like domain G3DSA:3.40.50.1000|G3DSA:3.40.50.10410|PF13242|PF13344|PIRSF000915|PTHR19288|PTHR19288:SF40|SSF56784|TIGR01460 B2904_RS05415 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000845|IPR004402|IPR018016|IPR018017 Nucleoside phosphorylase|Nucleoside phosphorylase domain|Nucleoside phosphorylase, conserved site|Purine nucleoside phosphorylase DeoD-type GO:0003824|GO:0004731|GO:0006139|GO:0009116|GO:0016763 G3DSA:3.40.50.1580|MF_01627|PF01048|PS01232|PTHR21234|PTHR21234:SF8|SSF53167|TIGR00107 B2904_RS05420 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR012394|IPR015590|IPR016161|IPR016162|IPR016163|IPR029510 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase NAD(P)-dependent|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase GO:0004030|GO:0006081|GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PIRSF036492|PS00687|PTHR11699|SSF53720 B2904_RS05425 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR013486|IPR013693 Sporulation stage II protein D, amidase enhancer LytB|Sporulation stage II protein D, amidase enhancer LytB N-terminal GO:0030435 PD191273|PF08486|PTHR30032|PTHR30032:SF4|TIGR02669 B2904_RS05430 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003790|IPR017853 Glycoside hydrolase superfamily|Glycosyl hydrolase-like 10 PF02638|PTHR30032|PTHR30032:SF2|SSF51445 B2904_RS05440 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004154|IPR004516|IPR015807 Anticodon-binding|Histidine-tRNA ligase|Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0004821|GO:0005524|GO:0005737|GO:0006427 G3DSA:3.30.930.10|G3DSA:3.40.50.800|MF_00127|PF03129|PF13393|PIRSF001549|PTHR11476|PTHR11476:SF9|SSF52954|SSF55681|TIGR00442 B2904_RS05445 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002110|IPR020683 Ankyrin repeat|Ankyrin repeat-containing domain GO:0005515 G3DSA:1.25.40.20|PF12796|PTHR24123|SM00248|SSF48403 B2904_RS05455 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001986|IPR006264|IPR013792|IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase|3-phosphoshikimate 1-carboxyvinyltransferase, conserved site|Enolpyruvate transferase domain|RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824|GO:0003866|GO:0016765 G3DSA:3.65.10.10|MF_00210|PF00275|PIRSF000505|PS00885|PTHR21090|PTHR21090:SF5|SSF55205|TIGR01356 B2904_RS05475 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PTHR30173|SSF88659|SSF88946|TIGR02937 B2904_RS05480 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR027383 Putative zinc-finger PF13490 B2904_RS05485 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000086|IPR003594|IPR003661|IPR004358|IPR015797 Histidine kinase-like ATPase, C-terminal domain|NUDIX hydrolase domain|NUDIX hydrolase domain-like|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772|GO:0016787 G3DSA:1.10.287.130|G3DSA:3.30.565.10|G3DSA:3.90.79.10|PF00293|PF00512|PF02518|PR00344|PTHR24423|SM00387|SM00388|SSF47384|SSF55811|SSF55874 B2904_RS05490 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003594 Histidine kinase-like ATPase, C-terminal domain G3DSA:3.30.565.10|PF13581|SSF55874 B2904_RS05495 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002575|IPR009212|IPR011009 Aminoglycoside phosphotransferase|Methylthioribose kinase|Protein kinase-like domain GO:0009086|GO:0046522 G3DSA:3.90.1200.10|MF_01683|PF01636|PIRSF031134|PTHR34273|PTHR34273:SF2|SSF56112|TIGR01767 B2904_RS05515 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001674|IPR004739|IPR014729|IPR017926|IPR022310|IPR022955|IPR029062 Class I glutamine amidotransferase-like|GMP synthase|GMP synthase, C-terminal|GMP synthase, N-terminal|Glutamine amidotransferase|NAD/GMP synthase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003922|GO:0005524|GO:0006164|GO:0006177 G3DSA:3.30.300.10|G3DSA:3.40.50.620|G3DSA:3.40.50.880|MF_00344|PF00117|PF00958|PF02540|PR00096|PR00097|PTHR11922|PTHR11922:SF2|SSF52317|SSF52402|SSF54810|TIGR00884|TIGR00888 B2904_RS05525 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000160|IPR000644|IPR029787 CBS domain|GGDEF domain|Nucleotide cyclase G3DSA:3.10.580.10|G3DSA:3.30.70.270|PF00571|PF00990|PTHR10799|PTHR10799:SF750|SM00116|SM00267|SSF54631|SSF55073|TIGR00254 B2904_RS05530 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 G3DSA:1.20.1090.10|G3DSA:3.40.50.1970|PF00465|PIRSF000112|PTHR11496|PTHR11496:SF55|SSF56796 B2904_RS05540 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000943|IPR007624|IPR007627|IPR007630|IPR009042|IPR011991|IPR013324|IPR013325|IPR014284|IPR016263 RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 1.2|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 3|RNA polymerase sigma-70 region 4|RNA polymerase sporulation-specific sigma factor|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006351|GO:0006352|GO:0006355|GO:0016987|GO:0030435 G3DSA:1.10.10.10|G3DSA:1.10.601.10|PF00140|PF04539|PF04542|PF04545|PIRSF000770|PR00046|PS00716|PTHR30603|PTHR30603:SF0|SSF88659|SSF88946|TIGR02937 B2904_RS05555 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003136|IPR011994|IPR027417 Cytidylate kinase|Cytidylate kinase domain|P-loop containing nucleoside triphosphate hydrolase GO:0004127|GO:0005524|GO:0006139 G3DSA:3.40.50.300|MF_00238|PF02224|PTHR21299|SSF52540|TIGR00017 B2904_RS05560 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000110|IPR003029|IPR012340|IPR022967 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|Ribosomal protein S1|S1 domain GO:0003676|GO:0003723|GO:0003735|GO:0005840|GO:0006412 G3DSA:2.40.50.140|PF00575|PR00681|PTHR10724|PTHR10724:SF6|SM00316|SSF50249 B2904_RS05565 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002491 ABC transporter periplasmic binding domain GO:0005488 G3DSA:3.40.50.1980|PF01497|PTHR30535|SSF53807 B2904_RS05570 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000522|IPR029022 ABC transporter, BtuC-like|ABC transporter, permease protein GO:0005215|GO:0016020 G3DSA:1.10.3470.10|PF01032|PTHR30472|PTHR30472:SF3|SSF81345 B2904_RS05575 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF73|SM00382|SSF52540 B2904_RS05595 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003439|IPR003593|IPR017871|IPR018449|IPR026253|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Methionine import ATP-binding protein MetN|NIL domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015821|GO:0016887|GO:0042626 G3DSA:3.30.70.260|G3DSA:3.40.50.300|PF00005|PF09383|PS00211|PTHR24220|PTHR24220:SF455|SM00382|SM00930|SSF52540|SSF55021 B2904_RS05600 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30450|PTHR30450:SF1|SSF161098 B2904_RS05605 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001236|IPR001557|IPR011304|IPR015955|IPR016040|IPR022383 L-lactate dehydrogenase|L-lactate/malate dehydrogenase|Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal|Lactate/malate dehydrogenase, C-terminal|Lactate/malate dehydrogenase, N-terminal|NAD(P)-binding domain GO:0003824|GO:0004459|GO:0005737|GO:0005975|GO:0016491|GO:0016616|GO:0019752|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.110.10|MF_00488|PF00056|PF02866|PIRSF000102|PR00086|PTHR11540|PTHR11540:SF24|SSF51735|SSF56327|TIGR01771 B2904_RS05610 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004872 Lipoprotein NlpA family G3DSA:3.40.190.10|PF03180|PIRSF002854|PTHR30429|SSF53850 B2904_RS05615 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004872 Lipoprotein NlpA family G3DSA:3.40.190.10|PF03180|PIRSF002854|PTHR30429|PTHR30429:SF1|SSF53850 B2904_RS05620 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007829 TM2 domain PF05154|PTHR21016 B2904_RS05625 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002110|IPR020683 Ankyrin repeat|Ankyrin repeat-containing domain GO:0005515 G3DSA:1.25.40.20|PF12796|PR01415|PTHR24198|SM00248|SSF48403 B2904_RS05630 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR032688 ABC-2 family transporter protein GO:0006810 PF12730|PTHR30294|PTHR30294:SF5 B2904_RS05635 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|SM00382|SSF52540 B2904_RS05645 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011032|IPR018369|IPR020818 Chaperonin GroES, conserved site|GroES chaperonin family|GroES-like GO:0005524|GO:0005737|GO:0006457 G3DSA:2.30.33.40|MF_00580|PF00166|PR00297|PS00681|PTHR10772|PTHR10772:SF0|SM00883|SSF50129 B2904_RS05655 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001763|IPR017582|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Rhodanese-like domain|tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 G3DSA:3.40.250.10|G3DSA:3.40.50.300|PF00581|PTHR30401|PTHR30401:SF0|SM00450|SSF52821|TIGR03167 B2904_RS05660 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003660|IPR004089|IPR033479 Double Cache domain 1|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|G3DSA:3.30.450.20|PF00015|PF00672|PF02743|PTHR32089|PTHR32089:SF63|SM00283|SSF58104 B2904_RS05665 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000905|IPR022496 Gcp-like domain|tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 G3DSA:3.30.420.40|PF00814|PTHR11735|PTHR11735:SF11|SSF53067|TIGR03725 B2904_RS05670 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005585|IPR024042 Hypothetical protein TM1646-like domain|Protein of unknown function DUF327 G3DSA:1.20.120.490|PF03885|SSF158397 B2904_RS05675 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 PF00209|PR00176|PS00610|PTHR11616|PTHR11616:SF167|SSF161070 B2904_RS05680 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 B2904_RS05685 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001845|IPR011991 HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01022|PR00778|PTHR33154|SM00418|SSF46785 B2904_RS05690 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001757|IPR008250|IPR018303|IPR023214|IPR023299|IPR027256 HAD-like domain|P-type ATPase|P-type ATPase, A domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site|P-type ATPase, subfamily IB GO:0000166|GO:0006812|GO:0016021|GO:0019829|GO:0046872 G3DSA:2.70.150.10|G3DSA:3.40.1110.10|G3DSA:3.40.50.1000|PF00122|PF00702|PR00119|PS00154|PTHR24093|PTHR24093:SF210|SSF56784|SSF81653|SSF81665|TIGR01494|TIGR01512|TIGR01525 B2904_RS05695 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006685|IPR010920|IPR011014|IPR011066 LSM domain|Mechanosensitive ion channel MscS|Mechanosensitive ion channel MscS, C-terminal|Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020|GO:0055085 G3DSA:2.30.30.60|G3DSA:3.30.70.100|PF00924|PTHR30566|SSF50182|SSF82689|SSF82861 B2904_RS05700 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004089|IPR029151|IPR033479 Double Cache domain 1|Methyl-accepting chemotaxis protein (MCP) signalling domain|Periplasmic sensor domain-like GO:0004871|GO:0007165|GO:0016020 G3DSA:1.10.287.950|G3DSA:3.30.450.20|PF00015|PF02743|PTHR32089|SM00283|SSF103190|SSF58104 B2904_RS05705 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR025493 Domain of unknown function DUF4384 PF14326 B2904_RS05715 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR025669|IPR027417 AAA domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13614|PTHR13696|PTHR13696:SF52|SSF52540 B2904_RS05720 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011990|IPR013105|IPR019734 Tetratricopeptide repeat|Tetratricopeptide repeat 2|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF07719|PF13181|PF13432|PTHR23083|SM00028|SSF48452 B2904_RS05725 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011055|IPR016047 Duplicated hybrid motif|Peptidase M23 G3DSA:2.70.70.10|PF01551|PTHR21666|SSF51261 B2904_RS05730 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011047|IPR015943 Quinoprotein alcohol dehydrogenase-like superfamily|WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.130.10.10|SSF50998 B2904_RS05735 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011055|IPR016047 Duplicated hybrid motif|Peptidase M23 G3DSA:2.70.70.10|PF01551|PTHR21666|SSF51261 B2904_RS05745 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000244|IPR009027|IPR020069|IPR020070|IPR020594 Ribosomal protein L9|Ribosomal protein L9, C-terminal|Ribosomal protein L9, N-terminal|Ribosomal protein L9, bacteria/chloroplast|Ribosomal protein L9/RNase H1, N-terminal GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.10.430.100|G3DSA:3.40.5.10|MF_00503|PF01281|PF03948|PS00651|PTHR21368|SSF55653|SSF55658|TIGR00158 B2904_RS05750 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007692|IPR007693|IPR007694|IPR016136|IPR027417 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal|DNA helicase, DnaB type|DNA helicase, DnaB-like, C-terminal|DNA helicase, DnaB-like, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003678|GO:0005524|GO:0006260 G3DSA:1.10.860.10|G3DSA:3.40.50.300|PF00772|PF03796|PTHR30153|SSF48024|SSF52540|TIGR00665 B2904_RS05765 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006218|IPR006269|IPR013785 3-deoxy-8-phosphooctulonate synthase|Aldolase-type TIM barrel|DAHP synthetase I/KDSA GO:0003824|GO:0005737|GO:0008152|GO:0008676|GO:0009058 G3DSA:3.20.20.70|PF00793|PTHR21057|PTHR21057:SF2|SSF51569|TIGR01362 B2904_RS05775 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR018022|IPR027417 P-loop containing nucleoside triphosphate hydrolase|tRNA dimethylallyltransferase GO:0008033 G3DSA:1.10.287.890|G3DSA:3.40.50.300|MF_00185|PF01715|PTHR11088|SSF52540|TIGR00174 B2904_RS05785 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR008145|IPR017665|IPR020590|IPR027417 Guanylate kinase|Guanylate kinase, conserved site|Guanylate kinase/L-type calcium channel beta subunit|P-loop containing nucleoside triphosphate hydrolase GO:0004385|GO:0006163 G3DSA:3.30.63.10|G3DSA:3.40.50.300|MF_00328|PF00625|PS00856|PTHR23117|SM00072|SSF52540|TIGR03263 B2904_RS05790 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR012349|IPR024747 FMN-binding split barrel|Pyridoxamine 5'-phosphate oxidase-related GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF12900|PTHR34071|SSF50475 B2904_RS05805 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001412|IPR002305|IPR002306|IPR014729|IPR024109 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ic|Rossmann-like alpha/beta/alpha sandwich fold|Tryptophan-tRNA ligase|Tryptophan-tRNA ligase, bacterial-type GO:0000166|GO:0004812|GO:0004830|GO:0005524|GO:0005737|GO:0006418|GO:0006436 G3DSA:1.10.240.10|G3DSA:3.40.50.620|MF_00140_B|PF00579|PR01039|PS00178|PTHR10055|PTHR10055:SF10|SSF52374|TIGR00233 B2904_RS05810 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001375|IPR029058 Alpha/Beta hydrolase fold|Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 G3DSA:3.40.50.1820|PF00326|PTHR10655|PTHR10655:SF24|SSF53474 B2904_RS05815 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PF01618|PTHR30625 B2904_RS05830 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002501|IPR014780|IPR020103 Pseudouridine synthase II, N-terminal|Pseudouridine synthase, catalytic domain|tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0006396|GO:0009451|GO:0009982 MF_01080|PF01509|PTHR13767|PTHR13767:SF2|SSF55120|TIGR00431 B2904_RS05835 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003329|IPR029044 Acylneuraminate cytidylyltransferase|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF02348|PTHR21485|PTHR21485:SF16|SSF53448 B2904_RS05845 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001599|IPR002890|IPR008930|IPR008979|IPR011625|IPR021868|IPR032812 Alpha-2-macroglobulin|Alpha-2-macroglobulin MG1 domain|Alpha-2-macroglobulin, N-terminal|Alpha-2-macroglobulin, N-terminal 2|Galactose-binding domain-like|SbsA, Ig-like domain|Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid GO:0004866 G3DSA:1.50.10.20|G3DSA:2.60.120.260|PF00207|PF01835|PF07703|PF11974|PF13205|PTHR40094|PTHR40094:SF1|SM01359|SM01360|SSF48239 B2904_RS05855 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 B2904_RS05865 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000160|IPR029787 GGDEF domain|Nucleotide cyclase G3DSA:3.30.70.270|PF00990|PTHR10799|PTHR10799:SF750|SM00267|SSF55073|TIGR00254 B2904_RS05870 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PTHR23083|SM00028|SSF48452 B2904_RS05880 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001098|IPR002298|IPR002421|IPR002562|IPR008918|IPR012337|IPR018320|IPR020045|IPR020046|IPR029060 3'-5' exonuclease domain|5'-3' exonuclease, C-terminal domain|5'-3' exonuclease, N-terminal|5'-3' exonuclease, alpha-helical arch, N-terminal|DNA polymerase 1|DNA polymerase A|DNA-directed DNA polymerase, family A, palm domain|Helix-hairpin-helix motif, class 2|PIN domain-like|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0003824|GO:0003887|GO:0006139|GO:0006260|GO:0006261|GO:0008408 G3DSA:1.10.150.20|G3DSA:1.20.1060.10|G3DSA:3.30.420.10|G3DSA:3.30.70.370|G3DSA:3.40.50.1010|PF00476|PF01367|PF01612|PF02739|PR00868|PTHR10133|PTHR10133:SF27|SM00279|SM00474|SM00475|SM00482|SSF47807|SSF53098|SSF56672|SSF88723|TIGR00593 B2904_RS05885 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001763 Rhodanese-like domain G3DSA:3.40.250.10|PF00581|SM00450|SSF52821 B2904_RS05900 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005835|IPR005836|IPR011004|IPR011831|IPR029044 ADP-glucose pyrophosphorylase, conserved site|Glucose-1-phosphate adenylyltransferase|Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain|Trimeric LpxA-like GO:0005978|GO:0008878|GO:0009058|GO:0016779 G3DSA:2.160.10.10|G3DSA:3.90.550.10|PF00483|PS00809|PS00810|PTHR22572|PTHR22572:SF110|SSF51161|SSF53448|TIGR02091 B2904_RS05910 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 PF01098|PTHR30474 B2904_RS05915 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004276|IPR006009|IPR007235 Glycosyl transferase, family 28, C-terminal|Glycosyltransferase family 28, N-terminal domain|N-acetylglucosaminyltransferase, MurG GO:0005975|GO:0009252|GO:0016758|GO:0030259|GO:0050511 G3DSA:3.40.50.2000|MF_00033|PF03033|PF04101|PTHR21015|PTHR21015:SF22|SSF53756 B2904_RS05920 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001509|IPR011912|IPR016040 ADP-L-glycero-D-manno-heptose-6-epimerase|NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0005975|GO:0008712|GO:0050661|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|PTHR10366|PTHR10366:SF469|SSF51735|TIGR02197 B2904_RS05930 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR018580 Uncharacterised protein family YfhO PF09586 B2904_RS05940 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000850|IPR006259|IPR027417 Adenylate kinase subfamily|Adenylate kinase/UMP-CMP kinase|P-loop containing nucleoside triphosphate hydrolase GO:0004017|GO:0005524|GO:0006139|GO:0016776|GO:0019205 G3DSA:3.40.50.300|MF_00235|PF00406|PR00094|PS00113|PTHR23359|SSF52540|TIGR01351 B2904_RS05945 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 PF02073|PTHR34448|PTHR34448:SF1|SSF144052 B2904_RS05950 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PTHR11751|PTHR11751:SF294|SSF53383 B2904_RS05965 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002110|IPR020683 Ankyrin repeat|Ankyrin repeat-containing domain GO:0005515 G3DSA:1.25.40.20|PF12796|PTHR24188|SM00248|SSF48403 B2904_RS05975 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000600|IPR011991 ROK family|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|G3DSA:3.30.420.40|PF00480|PTHR18964|PTHR18964:SF123|SSF46785|SSF53067 B2904_RS05980 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002085|IPR002328|IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|Alcohol dehydrogenase, zinc-type, conserved site|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PS00059|PTHR11695|PTHR11695:SF451|SM00829|SSF50129|SSF51735 B2904_RS05985 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|PTHR24322|SSF51735 B2904_RS05990 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR025997|IPR028082 Periplasmic binding protein|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13407|PTHR32196|PTHR32196:SF9|SSF53822 B2904_RS05995 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF416|SM00382|SSF52540 B2904_RS06000 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR32196|PTHR32196:SF21 B2904_RS06005 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|PIRSF006603|PTHR11206|PTHR11206:SF132|TIGR00797 B2904_RS06010 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001926|IPR006654|IPR023026 Tryptophan synthase beta chain/beta chain-like|Tryptophan synthase beta subunit-like PLP-dependent enzyme|Tryptophan synthase, beta chain GO:0000162|GO:0004834|GO:0006568 G3DSA:3.40.50.1100|MF_00133|PF00291|PIRSF001413|PTHR10314|PTHR10314:SF3|SSF53686|TIGR00263 B2904_RS06015 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 B2904_RS06020 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011042 Six-bladed beta-propeller, TolB-like G3DSA:2.120.10.30|SSF63825 B2904_RS06030 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003439|IPR003593|IPR013563|IPR027417 AAA+ ATPase domain|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PTHR24220|PTHR24220:SF81|SM00382|SSF52540|TIGR01727 B2904_RS06035 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|PTHR24220|PTHR24220:SF426|SM00382|SSF52540|TIGR01727 B2904_RS06040 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002110|IPR020683 Ankyrin repeat|Ankyrin repeat-containing domain GO:0005515 G3DSA:1.25.40.20|PF12796|PR01415|PTHR24123|SM00248|SSF48403 B2904_RS06045 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004089|IPR004090|IPR029151|IPR033479 Chemotaxis methyl-accepting receptor|Double Cache domain 1|Methyl-accepting chemotaxis protein (MCP) signalling domain|Periplasmic sensor domain-like GO:0004871|GO:0006935|GO:0007165|GO:0016020 G3DSA:1.10.287.950|G3DSA:3.30.450.20|PF00015|PF02743|PR00260|PTHR32089|SM00283|SSF103190|SSF58104 B2904_RS06050 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001155|IPR013785 Aldolase-type TIM barrel|NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0003824|GO:0010181|GO:0016491|GO:0055114 G3DSA:3.20.20.70|PF00724|PTHR22893|PTHR22893:SF7|SSF51395 B2904_RS06055 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002637|IPR020922|IPR029001 Ham1-like protein|Inosine triphosphate pyrophosphatase-like|Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0016787|GO:0017111 G3DSA:3.90.950.10|MF_01405|PF01725|PTHR11067|PTHR11067:SF9|SSF52972|TIGR00042 B2904_RS06060 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24221|SM00382|SSF52540|SSF90123 B2904_RS06065 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR026865|IPR027417 Cytidylate kinase-like family|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13189|SSF52540 B2904_RS06070 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR019260 Domain of unknown function DUF2262 PF10020 B2904_RS06075 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002313|IPR004364|IPR004365|IPR012340|IPR018149|IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)|Aminoacyl-tRNA synthetase, class II (D/K/N)-like|Lysine-tRNA ligase, class II|Lysyl-tRNA synthetase, class II, C-terminal|Nucleic acid-binding, OB-fold|OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0000166|GO:0003676|GO:0004812|GO:0004824|GO:0005524|GO:0005737|GO:0006418|GO:0006430 G3DSA:2.40.50.140|G3DSA:3.30.930.10|MF_00252|PF00152|PF01336|PR00982|PTHR22594|PTHR22594:SF4|SSF50249|SSF55681|TIGR00499 B2904_RS06080 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007345|IPR007516|IPR007525|IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Coenzyme F420 hydrogenase/dehydrogenase beta subunit, C-terminal|Coenzyme F420 hydrogenase/dehydrogenase beta subunit, N-terminal|Polysaccharide pyruvyl transferase G3DSA:1.10.1060.10|G3DSA:3.30.70.20|PF04230|PF04422|PF04432|PF12838|PS00198|SSF54862 B2904_RS06085 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR013217|IPR029063 Methyltransferase type 12|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF08242|SSF53335 B2904_RS06090 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 G3DSA:3.40.50.2000|PF01075|SSF53756 B2904_RS06095 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007197|IPR013785|IPR023885 4Fe4S-binding SPASM domain|Aldolase-type TIM barrel|Radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|PF04055|PF13186|PF13394|SSF102114 B2904_RS06100 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR013785|IPR023885 4Fe4S-binding SPASM domain|Aldolase-type TIM barrel GO:0003824 G3DSA:3.20.20.70|PF13186|PF13353|SSF102114 B2904_RS06110 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR029465 TupA-like ATPgrasp protein PF14305 B2904_RS06120 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR013785|IPR023885|IPR029044 4Fe4S-binding SPASM domain|Aldolase-type TIM barrel|Nucleotide-diphospho-sugar transferases GO:0003824 G3DSA:3.20.20.70|G3DSA:3.90.550.10|PF13186|PF13394|PTHR22916|PTHR22916:SF31|SSF102114|SSF53448 B2904_RS06125 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150 B2904_RS06135 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004101|IPR005762|IPR013221|IPR016040 Mur ligase, C-terminal|Mur ligase, central|NAD(P)-binding domain|UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0009058|GO:0016874|GO:0051301 G3DSA:3.40.1190.10|G3DSA:3.40.50.720|G3DSA:3.90.190.20|MF_00639|PF02875|PF08245|PTHR23135|PTHR23135:SF2|SSF51984|SSF53244|SSF53623|TIGR01087 B2904_RS06140 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003660|IPR004089|IPR004090|IPR012827|IPR033479 Chemotaxis methyl-accepting receptor|Double Cache domain 1|HAMP domain|Haemerythrin, metal-binding domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020|GO:0016021|GO:0046872 G3DSA:1.10.287.950|G3DSA:1.20.120.50|G3DSA:3.30.450.20|PF00015|PF00672|PF02743|PR00260|PTHR32089|SM00283|SSF47188|SSF58104|TIGR02481 B2904_RS06160 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000271|IPR020939 Ribosomal protein L34|Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00391|PD003101|PF00468|PS00784|PTHR14503|TIGR01030 B2904_RS06165 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000100|IPR014721|IPR020568 Ribonuclease P|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0000049|GO:0004526|GO:0008033 G3DSA:3.30.230.10|MF_00227|PD003629|PF00825|PTHR33992|SSF54211|TIGR00188 B2904_RS06170 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002696 Putative membrane protein insertion efficiency factor MF_00386|PD004225|PF01809|PTHR33383|SM01234|TIGR00278 B2904_RS06175 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001708|IPR019998|IPR028053|IPR028055 Membrane insertase OXA1/ALB3/YidC|Membrane insertase YidC|Membrane insertase YidC, N-terminal|Membrane insertase YidC/Oxa1, C-terminal GO:0016021|GO:0051205 MF_01810|PF02096|PF14849|PR00701|PTHR12428|PTHR12428:SF14|TIGR03592|TIGR03593 B2904_RS06180 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001374|IPR032782 Jag, N-terminal|R3H domain GO:0003676 G3DSA:3.30.1370.50|G3DSA:3.30.30.80|G3DSA:3.30.300.120|PF01424|PF13083|PF14804|PTHR35800|SM00393|SM01245|SSF82708 B2904_RS06195 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PTHR30290|PTHR30290:SF10|SSF53850 B2904_RS06200 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005184 Domain of unknown function DUF306, Meta/HslJ PF03724 B2904_RS06205 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005184 Domain of unknown function DUF306, Meta/HslJ PF03724 B2904_RS06210 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 B2904_RS06215 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR010699 Protein of unknown function DUF1275 PF06912|PTHR37314|PTHR37314:SF2 B2904_RS06220 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001623|IPR018253 DnaJ domain|DnaJ domain, conserved site G3DSA:1.10.287.110|PF00226|PR00625|PS00636|PTHR24078|SM00271|SSF46565 B2904_RS06225 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001305|IPR001623|IPR002939|IPR008971|IPR012724|IPR018253 Chaperone DnaJ|Chaperone DnaJ, C-terminal|DnaJ domain|DnaJ domain, conserved site|HSP40/DnaJ peptide-binding|Heat shock protein DnaJ, cysteine-rich domain GO:0005524|GO:0006457|GO:0009408|GO:0031072|GO:0051082 G3DSA:1.10.287.110|G3DSA:2.10.230.10|G3DSA:2.60.260.20|MF_01152|PF00226|PF00684|PF01556|PR00625|PS00636|PTHR24078|PTHR24078:SF190|SM00271|SSF46565|SSF49493|SSF57938|TIGR02349 B2904_RS06230 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001296 Glycosyl transferase, family 1 PF00534|SSF53756 B2904_RS06235 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF14559|PTHR23083|SM00028|SSF48452 B2904_RS06240 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004625|IPR013749|IPR029056 Pyridoxamine kinase/Phosphomethylpyrimidine kinase|Pyridoxine kinase|Ribokinase-like GO:0008478|GO:0009443 G3DSA:3.40.1190.20|PD968187|PF08543|PTHR10534|PTHR10534:SF0|SSF53613 B2904_RS06265 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001405|IPR020891|IPR025657 RadC protein|RadC-like JAB domain|Uncharacterised protein family UPF0758, conserved site G3DSA:3.40.140.10|PF04002|PS01302|PTHR30471|TIGR00608 B2904_RS06270 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413 B2904_RS06275 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003481|IPR010809 Flagellar hook-associated 2, C-terminal|Flagellar hook-associated protein 2, N-terminal GO:0007155|GO:0009288|GO:0009424 PF02465|PF07195|PTHR30288|PTHR30288:SF0 B2904_RS06280 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|PTHR12715|SSF103481 B2904_RS06285 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002110|IPR020683 Ankyrin repeat|Ankyrin repeat-containing domain GO:0005515 G3DSA:1.25.40.20|PF12796|PF13606|PR01415|PTHR24123|SM00248|SSF48403 B2904_RS06290 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000644|IPR006667|IPR006668|IPR006669 CBS domain|Magnesium transporter MgtE|Magnesium transporter, MgtE intracellular domain|SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324|GO:0015095|GO:0015693|GO:0016020 G3DSA:1.10.357.20|G3DSA:1.25.60.10|G3DSA:3.10.580.10|PF00571|PF01769|PF03448|PTHR11911|PTHR11911:SF23|SM00116|SM00924|SSF158791|SSF161093|SSF54631|TIGR00400 B2904_RS06305 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007698|IPR007886|IPR008141|IPR008143|IPR016040 Alanine dehydrogenase|Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal|Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain|Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2|NAD(P)-binding domain GO:0000286|GO:0016491|GO:0042853|GO:0055114 G3DSA:3.40.50.1770|G3DSA:3.40.50.720|PF01262|PF05222|PIRSF000183|PR00411|PS00837|PTHR10160|SM01002|SM01003|SSF51735|SSF52283|TIGR00518 B2904_RS06310 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004108|IPR009016|IPR017896|IPR017900|IPR027631 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Iron hydrogenase|Iron hydrogenase, large subunit, C-terminal|[FeFe] hydrogenase, group B1/B3 G3DSA:3.30.70.20|G3DSA:3.40.50.1780|PF00037|PF02906|PS00198|PTHR11615|PTHR11615:SF158|SSF53920|SSF54862|TIGR04105 B2904_RS06320 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR010787 Protein of unknown function DUF1385 PD131510|PF07136|PTHR31223|PTHR31223:SF5 B2904_RS06325 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic PF13231|PTHR33908|PTHR33908:SF1 B2904_RS06330 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR10859|PTHR10859:SF86|SSF53448 B2904_RS06340 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 PF03977|PIRSF015658|PTHR35806|TIGR01109 B2904_RS06345 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000089|IPR000891|IPR001882|IPR003379|IPR011053|IPR013785 Aldolase-type TIM barrel|Biotin-binding site|Biotin/lipoyl attachment|Carboxylase, conserved domain|Pyruvate carboxyltransferase|Single hybrid motif GO:0003824 G3DSA:2.40.50.100|G3DSA:3.20.20.70|PF00364|PF00682|PF02436|PS00188|PTHR18866|PTHR18866:SF109|SSF51230|SSF51569|SSF89000 B2904_RS06350 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 PF04277|TIGR01195 B2904_RS06355 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001920|IPR004391|IPR015942|IPR033134 Asp/Glu racemase|Asp/Glu racemase, active site 2|Asp/Glu/hydantoin racemase|Glutamate racemase GO:0006807|GO:0008152|GO:0008881|GO:0009252|GO:0016855|GO:0036361 G3DSA:3.40.50.1860|MF_00258|PF01177|PS00924|PTHR21198|PTHR21198:SF2|SSF53681|TIGR00067 B2904_RS06360 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 MF_00167|PD009007|PF02599|PTHR34984|PTHR34984:SF1|SSF117130|TIGR00202 B2904_RS06365 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003775|IPR024046 Flagellar assembly factor FliW|Flagellar assembly factor FliW domain GO:0044780 G3DSA:2.30.290.10|MF_01185|PF02623|PTHR39190|SSF141457 B2904_RS06370 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001029|IPR010810|IPR013384 Flagellar hook-associated protein 3|Flagellin hook, IN motif|Flagellin, D0/D1 domain GO:0005198|GO:0006928|GO:0009288|GO:0009424|GO:0044781|GO:0071973 G3DSA:1.20.1330.10|PF00669|PF07196|PTHR30244|PTHR30244:SF5|SSF64518|TIGR02550 B2904_RS06375 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|PF13420|PTHR23091|PTHR23091:SF187|SSF55729 B2904_RS06385 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR033195 Glycine/inosamine-phosphate amidinotransferase GO:0015067 G3DSA:3.75.10.10|PF02274|PTHR10488|SSF55909 B2904_RS06395 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002220|IPR005263|IPR013785|IPR020625 4-hydroxy-tetrahydrodipicolinate synthase, DapA|Aldolase-type TIM barrel|DapA-like|Schiff base-forming aldolase, active site GO:0003824|GO:0008152|GO:0008840|GO:0009089|GO:0016829 G3DSA:3.20.20.70|MF_00418|PF00701|PIRSF001365|PR00146|PS00666|PTHR12128|PTHR12128:SF34|SM01130|SSF51569|TIGR00674 B2904_RS06400 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002933|IPR011650|IPR017439 Amidohydrolase|Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PIRSF005962|PTHR11014|PTHR11014:SF63|SSF53187|SSF55031|TIGR01891 B2904_RS06410 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005474|IPR005475|IPR005477|IPR009014|IPR029061|IPR033247|IPR033248 Deoxyxylulose-5-phosphate synthase|Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase family|Transketolase, C-terminal domain|Transketolase, N-terminal|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0008152|GO:0008661|GO:0016114 G3DSA:3.40.50.920|G3DSA:3.40.50.970|MF_00315|PF02779|PF02780|PF13292|PS00801|PTHR11624|PTHR11624:SF20|SM00861|SSF52518|SSF52922|TIGR00204 B2904_RS06415 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001342|IPR005106|IPR016040|IPR016204|IPR019811 Aspartate/homoserine dehydrogenase, NAD-binding|Homoserine dehydrogenase|Homoserine dehydrogenase, catalytic|Homoserine dehydrogenase, conserved site|NAD(P)-binding domain GO:0004412|GO:0006520|GO:0016491|GO:0050661|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF00742|PF03447|PIRSF000098|PS01042|PTHR21499|PTHR21499:SF2|SSF51735|SSF55347 B2904_RS06420 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006145|IPR006224|IPR020103 Pseudouridine synthase, RluC/RluD, conserved site|Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PF00849|PS01129|PTHR11079|PTHR11079:SF73|SSF55120 B2904_RS06425 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002110|IPR020683 Ankyrin repeat|Ankyrin repeat-containing domain GO:0005515 G3DSA:1.25.40.20|PF12796|PR01415|PTHR24198|SM00248|SSF48403 B2904_RS06440 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001792|IPR017968 Acylphosphatase, conserved site|Acylphosphatase-like domain G3DSA:3.30.70.100|PF00708|PS00150|PTHR10029|PTHR10029:SF4|SSF54975 B2904_RS06450 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR029032 AhpD-like G3DSA:1.20.1290.10|SSF69118 B2904_RS06455 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 B2904_RS06460 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 B2904_RS06470 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002052|IPR003356|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|DNA methylase, adenine-specific|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0003677|GO:0006306|GO:0008168|GO:0008170|GO:0032259 G3DSA:3.40.50.150|PF02384|PR00507|PS00092|SSF53335 B2904_RS06475 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004305|IPR016084 Haem oxygenase-like, multi-helical|Thiaminase-2/PQQC G3DSA:1.20.910.10|PF03070|PTHR20858|PTHR20858:SF20|SSF48613 B2904_RS06485 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|SSF55729 B2904_RS06490 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005184 Domain of unknown function DUF306, Meta/HslJ PF03724 B2904_RS06495 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000890|IPR004372|IPR023865 Acetate/propionate kinase|Aliphatic acid kinase, short-chain|Aliphatic acid kinase, short-chain, conserved site GO:0005622|GO:0006082|GO:0008152|GO:0016301|GO:0016310|GO:0016774 G3DSA:3.30.420.40|MF_00020|PF00871|PIRSF000722|PR00471|PS01075|PS01076|PTHR21060|PTHR21060:SF11|SSF53067|TIGR00016 B2904_RS06500 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR008180|IPR008181|IPR029054 Deoxyuridine triphosphate nucleotidohydrolase|Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase|dUTPase-like GO:0004170|GO:0016787|GO:0046080 G3DSA:2.70.40.10|MF_00116|PF00692|PTHR11241|SSF51283|TIGR00576 B2904_RS06505 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 PF02447|PTHR30354|PTHR30354:SF0 B2904_RS06510 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000032|IPR002114 Phosphocarrier HPr protein-like|Phosphotransferase system, HPr serine phosphorylation site G3DSA:3.30.1340.10|PF00381|PR00107|PS00589|SSF55594|TIGR01003 B2904_RS06515 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002110|IPR020683 Ankyrin repeat|Ankyrin repeat-containing domain GO:0005515 G3DSA:1.25.40.20|PF13637|PF13857|PTHR24198|SM00248|SSF48403 B2904_RS06520 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR010652 Protein of unknown function DUF1232 PF06803 B2904_RS06525 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000965|IPR012134|IPR015590|IPR016161|IPR016162|IPR016163 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde/histidinol dehydrogenase|GPR domain|Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0008152|GO:0016491|GO:0016620|GO:0050661|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|MF_00412|PF00171|PIRSF000151|PTHR11063|PTHR11063:SF8|SSF53720|TIGR00407 B2904_RS06530 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001455 TusA-like domain G3DSA:3.30.110.40|SSF64307 B2904_RS06535 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007272|IPR026366 Putative selenium metabolism protein, YedE family|Sulphur transport domain PF04143|PTHR30574|PTHR30574:SF1|TIGR04112 B2904_RS06540 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003190|IPR009010 Aspartate decarboxylase|Aspartate decarboxylase-like domain GO:0004068|GO:0006523 G3DSA:2.40.40.20|MF_00446|PD009294|PF02261|PTHR21012|PTHR21012:SF0|SSF50692 B2904_RS06550 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR021533 Putative beta-lactamase-inhibitor-like, PepSY-like PF11396|SSF160574 B2904_RS06555 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR008146|IPR014746|IPR022147|IPR027303 Glutamine synthetase type III N-terminal|Glutamine synthetase, catalytic domain|Glutamine synthetase, glycine-rich site|Glutamine synthetase/guanido kinase, catalytic domain GO:0003824|GO:0004356|GO:0006807 G3DSA:3.30.590.10|PF00120|PF12437|PS00181|PTHR20852|PTHR20852:SF14|SM01230|SSF55931 B2904_RS06560 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 B2904_RS06565 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011004|IPR032533 Protein of unknown function DUF4954|Trimeric LpxA-like G3DSA:2.160.10.10|PF16314|SSF51161 B2904_RS06570 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004498|IPR029063 Ribosomal protein L11 methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase GO:0006479|GO:0008276 G3DSA:3.40.50.150|PF06325|PIRSF000401|PTHR18895|PTHR18895:SF3|SSF53335 B2904_RS06575 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001937|IPR005849|IPR005850|IPR011146 Galactose-1-phosphate uridyl transferase, C-terminal|Galactose-1-phosphate uridyl transferase, N-terminal|Galactose-1-phosphate uridyl transferase, class I|HIT-like domain GO:0003824|GO:0006012|GO:0008108|GO:0008270 G3DSA:3.30.428.10|PF01087|PF02744|PIRSF000808|PTHR11943|PTHR11943:SF3|SSF54197 B2904_RS06580 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|SM00448|SSF52172 B2904_RS06585 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000304|IPR008927|IPR016040|IPR028939|IPR029036 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|Pyrroline-5-carboxylate reductase|Pyrroline-5-carboxylate reductase, catalytic, N-terminal|Pyrroline-5-carboxylate reductase, dimerisation domain GO:0004735|GO:0006561|GO:0055114 G3DSA:1.10.3730.10|G3DSA:3.40.50.720|MF_01925|PF03807|PF14748|PIRSF000193|PS00521|PTHR11645|SSF48179|SSF51735|TIGR00112 B2904_RS06590 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003736|IPR006683|IPR029069 HotDog domain|Phenylacetic acid degradation-related domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|PTHR12418|SSF54637|TIGR00369 B2904_RS06595 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003764|IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain|N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448|GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|G3DSA:3.40.50.1360|PF01979|PTHR11113|PTHR11113:SF7|SSF100950|SSF51338|SSF51556|TIGR00221 B2904_RS06600 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004547|IPR006148 Glucosamine-6-phosphate isomerase|Glucosamine/galactosamine-6-phosphate isomerase GO:0004342|GO:0005975|GO:0006044 G3DSA:3.40.50.1360|PF01182|PTHR11280|PTHR11280:SF5|SSF100950 B2904_RS06605 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR012480 Heparinase II/III-like PF07940 B2904_RS06620 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PF00999|PTHR31102|PTHR31102:SF1 B2904_RS06625 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR021778 Protein of unknown function DUF3343 PF11823 B2904_RS06640 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001455|IPR019870|IPR027396 DsrEFH-like|Selenium metabolism protein YedF|TusA-like domain G3DSA:3.30.110.40|G3DSA:3.40.1260.10|PF01206|PS01148|PTHR33279|PTHR33279:SF3|SSF64307|SSF75169|TIGR03527 B2904_RS06645 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 PF02472|PTHR30558|PTHR30558:SF3 B2904_RS06650 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR014044 CAP domain G3DSA:3.40.33.10|PF00188|SSF55797 B2904_RS06655 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005841|IPR005843|IPR005844|IPR005845|IPR005846|IPR016055|IPR016066|IPR024086 Alpha-D-phosphohexomutase superfamily|Alpha-D-phosphohexomutase, C-terminal|Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III|Alpha-D-phosphohexomutase, alpha/beta/alpha domain I|Alpha-D-phosphohexomutase, alpha/beta/alpha domain II|Alpha-D-phosphohexomutase, alpha/beta/alpha domain III|Alpha-D-phosphohexomutase, conserved site|Phosphoglucosamine mutase, archaeal type GO:0000287|GO:0005975|GO:0008966|GO:0016868|GO:0071704 G3DSA:3.30.310.50|G3DSA:3.40.120.10|PF00408|PF02878|PF02879|PF02880|PR00509|PS00710|PTHR22573|PTHR22573:SF48|SSF53738|SSF55957|TIGR03990 B2904_RS06665 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002082|IPR006130|IPR006131|IPR006132 Aspartate carbamoyltransferase|Aspartate/ornithine carbamoyltransferase|Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain|Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0004070|GO:0006207|GO:0006520|GO:0016597|GO:0016743 G3DSA:3.40.50.1370|MF_00001|PF00185|PF02729|PR00100|PR00101|PS00097|PTHR11405|PTHR11405:SF39|SSF53671|TIGR00670 B2904_RS06675 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004821|IPR005248|IPR014729 Cytidyltransferase-like domain|Probable nicotinate-nucleotide adenylyltransferase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0009058|GO:0009435|GO:0016779 G3DSA:3.40.50.620|MF_00244|PF01467|PTHR12039|SSF52374|TIGR00125|TIGR00482 B2904_RS06680 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR015168|IPR027024 ABC-type uncharacterised transport system, substrate-binding component, TM0202 type|SsuA/THI5-like G3DSA:3.40.190.10|PF09084|PIRSF027386|PTHR30024|SSF53850 B2904_RS06690 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003706|IPR025299 CstA, C-terminal domain|CstA, N-terminal domain GO:0009267|GO:0016020 PF02554|PF13722|PTHR30252|PTHR30252:SF0 B2904_RS06700 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011990|IPR013105|IPR019734 Tetratricopeptide repeat|Tetratricopeptide repeat 2|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF07719|PF13181|PTHR23083|SM00028|SSF48452 B2904_RS06705 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 G3DSA:3.40.50.2000|PF01075|PTHR30160|PTHR30160:SF1|SSF53756 B2904_RS06710 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 G3DSA:3.40.50.10490|PF01380|PF13580|PTHR30390|SSF53697 B2904_RS06715 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR022742|IPR029058 Alpha/Beta hydrolase fold|Serine aminopeptidase, S33 G3DSA:3.40.50.1820|PF12146|PTHR11614|PTHR11614:SF87|SSF53474 B2904_RS06720 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001226|IPR008254|IPR029039 Flavodoxin, conserved site|Flavodoxin/nitric oxide synthase|Flavoprotein-like domain GO:0009055|GO:0010181 G3DSA:3.40.50.360|PF12682|PS00201|PTHR39201|PTHR39201:SF1|SSF52218 B2904_RS06730 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002877|IPR002942|IPR004538|IPR029063 Haemolysin A /rRNA methyltransferase TlyA|RNA-binding S4 domain|Ribosomal RNA methyltransferase FtsJ domain|S-adenosyl-L-methionine-dependent methyltransferase GO:0003723|GO:0008168|GO:0032259 G3DSA:3.10.290.10|PF01479|PF01728|PIRSF005578|PTHR32319|PTHR32319:SF0|SM00363|SSF53335|SSF55174|TIGR00478 B2904_RS06735 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000595|IPR014710|IPR018490 Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF00027|SSF51206 B2904_RS06740 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002110|IPR020683 Ankyrin repeat|Ankyrin repeat-containing domain GO:0005515 G3DSA:1.25.40.20|PF12796|PTHR24123|SM00248|SSF48403 B2904_RS06745 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic PF13440 B2904_RS06750 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR019196|IPR029062 ABC-type uncharacterised transport system|Class I glutamine amidotransferase-like PF09822|SSF52317 B2904_RS06755 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000352|IPR004374|IPR005139|IPR014720 Double-stranded RNA-binding domain|Peptide chain release factor|Peptide chain release factor 2|Peptide chain release factor class I/class II GO:0003747|GO:0005737|GO:0006415|GO:0016149 G3DSA:1.20.58.410|G3DSA:3.30.160.20|PF00472|PF03462|PS00745|PTHR11075|PTHR11075:SF6|SM00937|SSF75620|TIGR00020 B2904_RS06760 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000705|IPR006204|IPR006206|IPR013750|IPR014721|IPR019539|IPR020568 GHMP kinase N-terminal domain|GHMP kinase, C-terminal domain|Galactokinase|Galactokinase galactose-binding domain|Mevalonate/galactokinase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0004335|GO:0005524|GO:0005737|GO:0006012|GO:0008152|GO:0016301|GO:0016773|GO:0046835 G3DSA:3.30.230.10|G3DSA:3.30.70.890|PF00288|PF08544|PF10509|PIRSF000530|PR00473|PR00959|PTHR10457|PTHR10457:SF6|SSF54211|SSF55060|TIGR00131 B2904_RS06765 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001757|IPR004014|IPR006068|IPR006408|IPR008250|IPR018303|IPR023214|IPR023298|IPR023299 Cation-transporting P-type ATPase, C-terminal|Cation-transporting P-type ATPase, N-terminal|HAD-like domain|P-type ATPase|P-type ATPase, transmembrane domain|P-type ATPase, A domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site|P-type ATPase, subfamily IIB GO:0000166|GO:0005388|GO:0005524|GO:0016020|GO:0016021|GO:0046872|GO:0070588 G3DSA:1.20.1110.10|G3DSA:2.70.150.10|G3DSA:3.40.1110.10|PF00122|PF00689|PF00690|PF00702|PR00119|PR00120|PS00154|PTHR24093|SM00831|SSF56784|SSF81653|SSF81660|SSF81665|TIGR01494|TIGR01517 B2904_RS06770 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007721|IPR023750 D-ribose pyranase RbsD/L-fucose mutarotase FucU|RbsD-like domain GO:0005996|GO:0016853|GO:0048029 G3DSA:3.40.1650.10|PF05025|PTHR31690|SSF102546 B2904_RS06775 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004216|IPR005763|IPR009015|IPR012888|IPR012889|IPR015888 L-fucose isomerase|L-fucose isomerase, C-terminal|L-fucose isomerase, N-terminal-1|L-fucose isomerase, N-terminal-2|L-fucose isomerase, N-terminal/central domain|L-fucose/L-arabinose isomerase, C-terminal GO:0005737|GO:0005996|GO:0006004|GO:0008736|GO:0016861|GO:0019317|GO:0030145 G3DSA:3.20.14.10|G3DSA:3.40.275.10|G3DSA:3.40.50.1070|MF_01254|PF02952|PF07881|PF07882|PTHR37840|PTHR37840:SF1|SSF50443|SSF53743|TIGR01089 B2904_RS06780 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR025997|IPR028082 Periplasmic binding protein|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13407|PTHR32196|PTHR32196:SF14|SSF53822 B2904_RS06785 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR32196|PTHR32196:SF21 B2904_RS06790 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF416|SM00382|SSF52540 B2904_RS06795 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR018484|IPR018485 Carbohydrate kinase, FGGY, C-terminal|Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 G3DSA:3.30.420.40|PF00370|PF02782|PTHR10196|PTHR10196:SF6|SSF53067 B2904_RS06800 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001303 Class II aldolase/adducin N-terminal G3DSA:3.40.225.10|PF00596|PTHR22789|PTHR22789:SF0|SM01007|SSF53639 B2904_RS06805 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001670|IPR013460|IPR018211 Alcohol dehydrogenase, iron-type|Alcohol dehydrogenase, iron-type, conserved site|Lactaldehyde reductase GO:0016491|GO:0046872|GO:0055114 G3DSA:1.20.1090.10|G3DSA:3.40.50.1970|PF00465|PS00060|PS00913|PTHR11496|PTHR11496:SF77|SSF56796|TIGR02638 B2904_RS06810 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000843|IPR010982|IPR028082 Lambda repressor-like, DNA-binding domain|Periplasmic binding protein-like I|Transcription regulator HTH, LacI GO:0003677|GO:0003700|GO:0006355 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|PTHR30146|PTHR30146:SF4|SM00354|SSF47413|SSF53822 B2904_RS06815 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR008258|IPR011990|IPR023346 Lysozyme-like domain|Tetratricopeptide-like helical domain|Transglycosylase SLT domain 1 GO:0005515 G3DSA:1.10.530.10|G3DSA:1.25.40.10|PF01464|PTHR21666|SSF48452|SSF53955 B2904_RS06825 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005653 Organic solvent tolerance-like, N-terminal G3DSA:2.60.450.10|PF03968 B2904_RS06830 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR010664|IPR026265 Lipopolysaccharide assembly, LptC-related|Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 PF06835|TIGR04409 B2904_RS06835 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR010023|IPR023214 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase|HAD-like domain GO:0019143 G3DSA:3.40.50.1000|PF08282|PIRSF006118|PTHR21485|SSF56784|TIGR01670 B2904_RS06850 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001367|IPR011991|IPR022687|IPR022689 DTXR-type HTH domain|Iron dependent repressor|Iron dependent repressor, metal binding and dimerisation domain|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006355|GO:0046914|GO:0046983 G3DSA:1.10.10.10|G3DSA:1.10.60.10|PF01325|PF02742|PTHR33238|PTHR33238:SF1|SM00529|SSF46785|SSF47979 B2904_RS06855 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000183|IPR002986|IPR009006|IPR022643|IPR022644|IPR029066 Alanine racemase/group IV decarboxylase, C-terminal|Diaminopimelate decarboxylase, LysA|Orn/DAP/Arg decarboxylase 2, C-terminal|Orn/DAP/Arg decarboxylase 2, N-terminal|Ornithine/DAP/Arg decarboxylase|PLP-binding barrel GO:0003824|GO:0008836|GO:0009089 G3DSA:2.40.37.10|G3DSA:3.20.20.10|MF_02120|PF00278|PF02784|PR01179|PR01181|PTHR11482|PTHR11482:SF5|SSF50621|SSF51419|TIGR01048 B2904_RS06865 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR009057 Homeodomain-like GO:0003677 G3DSA:1.10.10.60 B2904_RS06870 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|SM00448|SSF52172 B2904_RS06880 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000587|IPR000994|IPR001131|IPR028980|IPR029149 Creatinase, N-terminal|Creatinase/Aminopeptidase P, N-terminal|Creatinase/Aminopeptidase P/Spt16, N-terminal|Peptidase M24, structural domain|Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site GO:0016787 G3DSA:3.40.350.10|G3DSA:3.90.230.10|PF00557|PF01321|PS00491|PTHR10804|PTHR10804:SF110|SSF53092|SSF55920 B2904_RS06885 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011089 Domain of unknown function DUF1524 PF07510|PTHR24094|PTHR24094:SF10 B2904_RS06895 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002820|IPR023045 Molybdenum cofactor biosynthesis C|Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 G3DSA:3.30.70.640|PF01967|PTHR22960|SSF55040|TIGR00581 B2904_RS06900 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000385|IPR006638|IPR007197|IPR010505|IPR013785 Aldolase-type TIM barrel|Elongator protein 3/MiaB/NifB|MoaA/nifB/pqqE, iron-sulphur binding, conserved site|Molybdenum cofactor synthesis C-terminal|Radical SAM GO:0003824|GO:0006777|GO:0019008|GO:0046872|GO:0051536|GO:0051539 G3DSA:3.20.20.70|PF04055|PF06463|PF13353|PS01305|PTHR22960|SM00729|SSF102114 B2904_RS06905 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001453|IPR005110|IPR005111|IPR008284 MoaB/Mog domain|MoeA, C-terminal, domain IV|MoeA, N-terminal and linker domain|Molybdenum cofactor biosynthesis, conserved site GO:0006777|GO:0032324 G3DSA:2.170.190.11|G3DSA:2.40.340.10|G3DSA:3.40.980.10|PF00994|PF03453|PF03454|PS01079|PTHR10192|SM00852|SSF53218|SSF63867|SSF63882|TIGR00177 B2904_RS06915 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000515|IPR011867 ABC transporter type 1, transmembrane domain MetI-like|Molybdate ABC transporter, permease protein GO:0006810|GO:0015098|GO:0015689|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|PTHR30183|SSF161098|TIGR02141 B2904_RS06920 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 G3DSA:3.40.190.10|PF13531|PIRSF004846|PTHR30632|PTHR30632:SF0|SSF53850|TIGR01256 B2904_RS06925 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001453|IPR008284 MoaB/Mog domain|Molybdenum cofactor biosynthesis, conserved site GO:0006777 G3DSA:3.40.980.10|PF00994|PS01078|PTHR10192|SM00852|SSF53218|TIGR00177 B2904_RS06930 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005302|IPR011037|IPR015808 Molybdenum cofactor sulfurase, C-terminal|Molybdenum cofactor sulfurase, C-terminal-like|Pyruvate kinase-like, insert domain GO:0003824|GO:0030151|GO:0030170 G3DSA:2.40.33.20|PF03473|PTHR36930|PTHR36930:SF1|SSF50800 B2904_RS06935 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic SSF55961 B2904_RS06940 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002110|IPR020683 Ankyrin repeat|Ankyrin repeat-containing domain GO:0005515 G3DSA:1.25.40.20|PF00023|PF12796|PTHR24198|SM00248|SSF48403 B2904_RS06970 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR014469 Protein of unknown function DUF2271 PF10029 B2904_RS06980 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 PF01420|PTHR30408|PTHR30408:SF2|SSF116734 B2904_RS06985 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002052|IPR003356|IPR004546|IPR022749|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|DNA methylase, adenine-specific|N6 adenine-specific DNA methyltransferase, N-terminal domain|Restriction endonuclease, type I, HsdM|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0003677|GO:0006306|GO:0008168|GO:0008170|GO:0009007|GO:0009307|GO:0032259 G3DSA:3.40.50.150|PF02384|PF12161|PR00507|PS00092|PTHR30408|PTHR30408:SF4|SSF53335|TIGR00497 B2904_RS06990 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001763 Rhodanese-like domain G3DSA:3.40.250.10|PF00581|SM00450|SSF52821 B2904_RS06995 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003834|IPR012336|IPR013766|IPR022910|IPR028250 Cytochrome C biogenesis protein, transmembrane domain|Thiol:disulfide interchange protein DsbD, N-terminal domain|Thiol:disulphide interchange protein DsbD|Thioredoxin domain|Thioredoxin-like fold GO:0016020|GO:0017004|GO:0045454|GO:0047134|GO:0055114 G3DSA:2.60.40.1250|G3DSA:3.40.30.10|PF00085|PF02683|PF11412|PTHR32234|PTHR32234:SF0|SSF52833|SSF74863 B2904_RS07005 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002110|IPR020683 Ankyrin repeat|Ankyrin repeat-containing domain GO:0005515 G3DSA:1.25.40.20|PF12796|SM00248|SSF48403 B2904_RS07010 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR010106 Conserved hypothetical protein CHP01784 PF12784|PTHR41317|PTHR41317:SF1|TIGR01784 B2904_RS07015 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003500|IPR004785 Ribose 5-phosphate isomerase B|Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0004751|GO:0005975|GO:0006098|GO:0016853 G3DSA:3.40.1400.10|PF02502|PIRSF005384|PTHR30345|SSF89623|TIGR00689|TIGR01120 B2904_RS07020 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002864|IPR029069 Acyl-ACP thioesterase|HotDog domain GO:0006633|GO:0016790 G3DSA:3.10.129.10|PF01643|SSF54637 B2904_RS07025 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003730|IPR011324 Cytotoxic necrotizing factor-like, catalytic|Multi-copper polyphenol oxidoreductase, laccase G3DSA:3.60.140.10|PF02578|PTHR30616|SSF64438|TIGR00726 B2904_RS07030 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic SSF57997 B2904_RS07035 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001804|IPR004429|IPR019818|IPR024084 Isocitrate and isopropylmalate dehydrogenases family|Isocitrate/isopropylmalate dehydrogenase, conserved site|Isopropylmalate dehydrogenase|Isopropylmalate dehydrogenase-like domain GO:0000287|GO:0003862|GO:0005737|GO:0009098|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.718.10|MF_01033|PF00180|PS00470|PTHR11835|PTHR11835:SF35|SM01329|SSF53659|TIGR00169 B2904_RS07040 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000573|IPR011824|IPR011827|IPR015928|IPR015937 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain|Aconitase/3-isopropylmalate dehydratase, swivel|Aconitase/isopropylmalate dehydratase|Hydrolyase LeuD/DmdB, bacterial|Hydrolyase LeuD/HacB/DmdB GO:0008152|GO:0016836 G3DSA:3.20.19.10|MF_01032|PF00694|PTHR11670|PTHR11670:SF41|SSF52016|TIGR02084|TIGR02087 B2904_RS07045 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001030|IPR006251|IPR011823|IPR011826|IPR015931|IPR015932|IPR015937|IPR018136 3-isopropylmalate dehydratase, large subunit, bacteria|Aconitase family, 4Fe-4S cluster binding site|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2|Aconitase/isopropylmalate dehydratase|Homoaconitase/3-isopropylmalate dehydratase, large subunit|Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0008152|GO:0008652|GO:0009098|GO:0016836|GO:0051539 G3DSA:3.30.499.10|G3DSA:3.40.1060.10|MF_01027|PF00330|PR00415|PS00450|PS01244|PTHR11670|SSF53732|TIGR01343|TIGR02083|TIGR02086 B2904_RS07050 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000891|IPR002034|IPR005671|IPR013709|IPR013785 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain|2-isopropylmalate synthase, bacterial-type|Aldolase-type TIM barrel|Alpha-isopropylmalate/homocitrate synthase, conserved site|Pyruvate carboxyltransferase GO:0003824|GO:0003852|GO:0009098|GO:0019752|GO:0046912 G3DSA:3.20.20.70|MF_01025|PF00682|PF08502|PS00815|PS00816|PTHR10277|PTHR10277:SF9|SM00917|SSF110921|SSF51569|TIGR00973 B2904_RS07055 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000506|IPR008927|IPR013023|IPR013116|IPR013328|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|Acetohydroxy acid isomeroreductase C-terminal|Acetohydroxy acid isomeroreductase, NADPH-binding domain|Ketol-acid reductoisomerase|NAD(P)-binding domain GO:0004455|GO:0009082|GO:0016491|GO:0055114 G3DSA:1.10.1040.10|MF_00435|PF01450|PF07991|PTHR21371|SSF48179|SSF51735|TIGR00465 B2904_RS07060 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004789|IPR019455 Acetolactate synthase, small subunit|Acetolactate synthase, small subunit, C-terminal GO:0003984|GO:0009082 G3DSA:3.30.70.1150|G3DSA:3.30.70.260|PD002844|PF10369|PF13710|PTHR30239|SSF55021|TIGR00119 B2904_RS07065 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000399|IPR011766|IPR012000|IPR012001|IPR012846|IPR029035|IPR029061 Acetolactate synthase, large subunit, biosynthetic|DHS-like NAD/FAD-binding domain|TPP-binding enzyme, conserved site|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0003984|GO:0009082|GO:0030976|GO:0050660 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|PS00187|PTHR18968|PTHR18968:SF116|SSF52467|SSF52518|TIGR00118 B2904_RS07070 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 G3DSA:1.10.940.10 B2904_RS07075 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004147|IPR011009 Protein kinase-like domain|UbiB domain G3DSA:3.90.1200.10|PF03109|PTHR10566|PTHR10566:SF10|SSF56112 B2904_RS07080 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003646|IPR011990 SH3-like domain, bacterial-type|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF08239|SSF48452 B2904_RS07085 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR025738 Aerotolerance-related protein BatD PF13584 B2904_RS07090 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13414|SM00028|SSF48452 B2904_RS07095 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002035 von Willebrand factor, type A G3DSA:3.40.50.410|PF00092|PTHR22550|PTHR22550:SF8|SM00327|SSF53300 B2904_RS07100 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011059|IPR013108|IPR032466 Amidohydrolase 3|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF07969|PTHR22642|PTHR22642:SF2|SSF51338|SSF51556 B2904_RS07105 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR032781 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-transporter extension domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12848|PS00211|PTHR19211|SM00382|SSF52540 B2904_RS07110 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004099|IPR016040|IPR016156|IPR023753 FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0016491|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.40.50.720|G3DSA:3.50.50.60|PF02852|PF07992|PR00368|PR00411|PTHR22912|PTHR22912:SF147|SSF51905|SSF55424 B2904_RS07115 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011697|IPR029062 Class I glutamine amidotransferase-like|Peptidase C26 GO:0006541|GO:0016787 G3DSA:3.40.50.880|PF07722|PTHR11922|PTHR11922:SF18|SSF52317 B2904_RS07120 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PTHR30290|PTHR30290:SF10|SSF53850 B2904_RS07125 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR019223 Domain of unknown function DUF2147 PF09917 B2904_RS07135 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13174|PF13181|PTHR23083|SM00028|SSF48452 B2904_RS07145 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000330|IPR001650|IPR013663|IPR014001|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase, SWF/SNF/SWI type, bacterial|P-loop containing nucleoside triphosphate hydrolase|SNF2-related, N-terminal domain GO:0005524 G3DSA:3.40.50.300|PF00176|PF00271|PF08455|PTHR10799|SM00487|SM00490|SSF52540 B2904_RS07155 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007563 Protein of unknown function DUF554 PF04474|PTHR36111|PTHR36111:SF2 B2904_RS07160 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000811|IPR011834|IPR024517 Alpha-glucan phosphorylase|Glycogen phosphorylase, domain of unknown function DUF3417|Glycosyl transferase, family 35 GO:0004645|GO:0005975|GO:0008184|GO:0030170 G3DSA:3.40.50.2000|PF00343|PF11897|PIRSF000460|PTHR11468|PTHR11468:SF9|SSF53756|TIGR02094 B2904_RS07180 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002110|IPR020683 Ankyrin repeat|Ankyrin repeat-containing domain GO:0005515 G3DSA:1.25.40.20|PF00023|PF12796|PR01415|PTHR24123|SM00248|SSF48403 B2904_RS07185 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001029|IPR001492 Flagellin|Flagellin, D0/D1 domain GO:0005198|GO:0009420|GO:0071973 G3DSA:1.20.1330.10|PF00669|PF00700|PR00207|PTHR30244|PTHR30244:SF1|SSF64518 B2904_RS07190 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000792|IPR011991|IPR013324 RNA polymerase sigma factor, region 3/4|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|PF00196|SSF88659 B2904_RS07200 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007419 BFD-like [2Fe-2S]-binding domain PF04324 B2904_RS07205 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001653|IPR018510 Diaminopimelate epimerase, DapF|Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 G3DSA:3.10.310.10|MF_00197|PF01678|PS01326|PTHR31689|PTHR31689:SF0|SSF54506|TIGR00652 B2904_RS07220 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003680|IPR029039 Flavodoxin-like fold|Flavoprotein-like domain G3DSA:3.40.50.360|PF02525|SSF52218 B2904_RS07225 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002110|IPR020683 Ankyrin repeat|Ankyrin repeat-containing domain GO:0005515 G3DSA:1.25.40.20|PF12796|PTHR24198|SM00248|SSF48403 B2904_RS07230 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003768 Segregation and condensation protein A PF02616|PTHR33969|PTHR33969:SF2 B2904_RS07235 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|PTHR12715|PTHR12715:SF12|SSF103481 B2904_RS07245 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000944|IPR011991 Transcription regulator Rrf2-type|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF02082|PTHR33221|PTHR33221:SF5|SSF46785 B2904_RS07250 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002589 Macro domain G3DSA:3.40.220.10|PF01661|PTHR11106|SM00506|SSF52949 B2904_RS07255 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR029035 DHS-like NAD/FAD-binding domain G3DSA:3.40.50.1220|SSF52467 B2904_RS07260 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR016040 NAD(P)-binding domain G3DSA:3.40.50.720|PF13460|PTHR15020|PTHR15020:SF29|SSF51735 B2904_RS07265 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000185|IPR004027|IPR011115|IPR011116|IPR011130|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Protein translocase subunit SecA|SEC-C motif|SecA DEAD-like, N-terminal|SecA Wing/Scaffold|SecA preprotein, cross-linking domain GO:0005524|GO:0006605|GO:0006886|GO:0016020|GO:0017038 G3DSA:1.10.3060.10|G3DSA:3.40.50.300|G3DSA:3.90.1440.10|MF_01382|PF01043|PF02810|PF07516|PF07517|PR00906|PTHR30612|SM00957|SM00958|SSF52540|SSF81767|SSF81886|TIGR00963 B2904_RS07270 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003394|IPR005534|IPR011250 Curli production assembly/transport component CsgG|Outer membrane protein/outer membrane enzyme PagP, beta-barrel|Porin, opacity type GO:0015288|GO:0016020|GO:0016021|GO:0030288 G3DSA:2.40.160.20|PF02462|PF03783|SSF56925 B2904_RS07280 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 PF04977 B2904_RS07285 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF111|SM00382|SSF52540 B2904_RS07290 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003838|IPR025857 ABC transporter permease protein domain|MacB-like periplasmic core domain GO:0016020 PF02687|PF12704|PTHR30489 B2904_RS07295 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004481|IPR004837 Sodium/calcium exchanger membrane region|Sodium/potassium/calcium exchanger GO:0016021|GO:0055085 PF01699|PTHR10846|PTHR10846:SF8|TIGR00367 B2904_RS07300 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13683|SSF53098 B2904_RS07315 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002765 Uncharacterised protein family UPF0145 G3DSA:3.30.110.70|MF_00338|PF01906|PTHR34068|PTHR34068:SF3|SSF117782 B2904_RS07320 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005269|IPR031100 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG|LOG family G3DSA:3.40.50.450|PF03641|PTHR31223|PTHR31223:SF1|SSF102405|TIGR00730 B2904_RS07335 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001865|IPR005706|IPR018130|IPR023591 Ribosomal protein S2|Ribosomal protein S2, bacteria/mitochondria/plastid|Ribosomal protein S2, conserved site|Ribosomal protein S2, flavodoxin-like domain GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015935 G3DSA:1.10.287.610|G3DSA:3.40.50.10490|MF_00291_B|PF00318|PR00395|PS00962|PS00963|PTHR12534|SSF52313|TIGR01011 B2904_RS07340 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001816|IPR009060|IPR014039|IPR018101 Translation elongation factor EFTs/EF1B|Translation elongation factor EFTs/EF1B, dimerisation|Translation elongation factor Ts, conserved site|UBA-like GO:0003746|GO:0005515|GO:0005622|GO:0006414 G3DSA:1.10.286.20|G3DSA:1.10.8.10|G3DSA:3.30.479.20|MF_00050|PF00889|PS01126|PTHR11741|SSF46934|SSF54713|TIGR00116 B2904_RS07345 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR010493|IPR011004 Serine acetyltransferase, N-terminal|Trimeric LpxA-like GO:0005737|GO:0006535|GO:0009001 G3DSA:1.10.3130.10|G3DSA:2.160.10.10|PF06426|PTHR23416|PTHR23416:SF65|SSF51161 B2904_RS07350 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme G3DSA:3.40.50.1100|PF00291|PTHR10314|PTHR10314:SF8|SSF53686 B2904_RS07355 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000192|IPR015421|IPR015422|IPR015424|IPR016454|IPR017772|IPR018247|IPR020578 Aminotransferase class V domain|Aminotransferase class-V, pyridoxal-phosphate binding site|Cysteine desulfurase|Cysteine desulfurase NifS, bacterial/archaeal|EF-Hand 1, calcium-binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0006520|GO:0030170|GO:0031071 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|PIRSF005572|PS00018|PS00595|PTHR11601|PTHR11601:SF20|SSF53383|TIGR03402 B2904_RS07360 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001075|IPR002871|IPR007419|IPR010238|IPR016217 BFD-like [2Fe-2S]-binding domain|NIF system FeS cluster assembly, NifU|NIF system FeS cluster assembly, NifU, C-terminal|NIF system FeS cluster assembly, NifU, N-terminal|Nitrogen fixation, NifU GO:0005506|GO:0016226|GO:0051536 G3DSA:3.90.1010.10|PD002830|PF01106|PF01592|PF04324|PIRSF000375|PTHR10093|PTHR10093:SF1|SSF117916|SSF82649|TIGR02000 B2904_RS07365 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007419 BFD-like [2Fe-2S]-binding domain PF04324 B2904_RS07370 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004300|IPR011013|IPR011330|IPR014718|IPR015178|IPR015179|IPR027291|IPR028995 Alpha-amylase/4-alpha-glucanotransferase, C-terminal|Alpha-amylase/4-alpha-glucanotransferase, central domain|Galactose mutarotase-like domain|Glycoside hydrolase 38/57, N-terminal domain|Glycoside hydrolase families 57/38, central domain|Glycoside hydrolase family 57, N-terminal domain|Glycoside hydrolase-type carbohydrate-binding, subgroup|Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975|GO:0030246 G3DSA:2.70.98.10|G3DSA:3.20.110.10|PD014405|PF03065|PF09094|PF09095|SSF74650|SSF88688|SSF88713 B2904_RS07375 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13500|SSF52540 B2904_RS07380 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR028082 Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13377|PTHR30146|PTHR30146:SF4|SSF53822 B2904_RS07385 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001088|IPR015955|IPR016040|IPR022616 Glycoside hydrolase, family 4|Glycosyl hydrolase, family 4, C-terminal|Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal|NAD(P)-binding domain GO:0003824|GO:0004553|GO:0005975|GO:0016616|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.110.10|PF02056|PF11975|PR00732|PTHR32092|SSF51735|SSF56327 B2904_RS07390 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001996|IPR003352|IPR010975|IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site|Phosphotransferase system, EIIC|Phosphotransferase system, IIB component, type 1|Phosphotransferase system, alpha-glucoside-specific IIBC component GO:0008982|GO:0009401|GO:0016020 G3DSA:3.30.1360.60|PF00367|PF02378|PS01035|PTHR30009|PTHR30009:SF12|SSF55604|TIGR00826|TIGR02005 B2904_RS07395 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001088|IPR015955|IPR016040|IPR019802|IPR022616 Glycoside hydrolase, family 4|Glycoside hydrolase, family 4, conserved site|Glycosyl hydrolase, family 4, C-terminal|Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal|NAD(P)-binding domain GO:0003824|GO:0004553|GO:0005975|GO:0016616|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.110.10|PF02056|PF11975|PR00732|PS01324|PTHR32092|PTHR32092:SF7|SSF51735|SSF56327 B2904_RS07400 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000870|IPR006203|IPR006204|IPR013750|IPR014721|IPR020568 GHMP kinase N-terminal domain|GHMP kinase, ATP-binding, conserved site|GHMP kinase, C-terminal domain|Homoserine kinase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0004413|GO:0005524|GO:0006566 G3DSA:3.30.230.10|G3DSA:3.30.70.890|MF_00384|PF00288|PF08544|PIRSF000676|PR00958|PS00627|PTHR20861|PTHR20861:SF1|SSF54211|SSF55060|TIGR00191 B2904_RS07405 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000634|IPR001926|IPR004450|IPR026260 Serine/threonine dehydratase, pyridoxal-phosphate-binding site|Threonine synthase, bacterial/archaeal|Threonine synthase-like|Tryptophan synthase beta subunit-like PLP-dependent enzyme GO:0004795|GO:0006520|GO:0009088|GO:0030170 G3DSA:3.40.50.1100|PF00291|PIRSF038945|PS00165|PTHR10314|PTHR10314:SF5|SSF53686|TIGR00260 B2904_RS07410 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007768|IPR020941 Suppressor of fused|Suppressor of fused-like domain PF05076|PTHR10928|PTHR10928:SF2|SSF103359 B2904_RS07415 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002474|IPR006274|IPR017926|IPR029062 Carbamoyl-phosphate synthase, small subunit|Carbamoyl-phosphate synthase, small subunit N-terminal domain|Class I glutamine amidotransferase-like|Glutamine amidotransferase GO:0004088|GO:0006207|GO:0006541 G3DSA:3.40.50.880|G3DSA:3.50.30.20|MF_01209|PF00117|PF00988|PR00096|PR00097|PR00099|PTHR11405|SM01097|SSF52021|SSF52317|TIGR01368 B2904_RS07420 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005479|IPR005480|IPR005483|IPR006275|IPR011607|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Carbamoyl-phosphate synthase large subunit, CPSase domain|Carbamoyl-phosphate synthase, large subunit|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain|Carbamoyl-phosphate synthetase, large subunit oligomerisation domain|Methylglyoxal synthase-like domain|Pre-ATP-grasp domain GO:0003824|GO:0005524|GO:0006807 G3DSA:1.10.1030.10|G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.1380|G3DSA:3.40.50.20|MF_01210_B|PF02142|PF02786|PF02787|PR00098|PS00866|PS00867|PTHR11405|PTHR11405:SF5|SM00851|SM01096|SSF48108|SSF52335|SSF52440|SSF56059|TIGR01369 B2904_RS07435 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000101|IPR029055 Gamma-glutamyltranspeptidase|Nucleophile aminohydrolases, N-terminal GO:0003840|GO:0006749 PF01019|PR01210|PTHR11686|PTHR11686:SF8|SSF56235 B2904_RS07440 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 B2904_RS07445 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004838|IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferases, class-I, pyridoxal-phosphate-binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PS00105|PTHR11751|PTHR11751:SF404|SSF53383 B2904_RS07460 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR010420|IPR016040 CASTOR/POLLUX/SYM8 ion channels|NAD(P)-binding domain G3DSA:3.40.50.720|PF06241|PTHR31563|SSF51735 B2904_RS07465 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SSF81901 B2904_RS07470 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR032585 Protein of unknown function DUF4912 PF16258 B2904_RS07475 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 MF_00191|PF02401|PTHR30426|TIGR00216 B2904_RS07480 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001383|IPR026569 Ribosomal protein L28|Ribosomal protein L28/L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.30.170.40|MF_00373|PF00830|PTHR13528|PTHR13528:SF5|SSF143800|TIGR00009 B2904_RS07485 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR026022|IPR028366 PhoU domain|Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 G3DSA:1.20.58.220|PF01895|PIRSF003107|PTHR10010|PTHR10010:SF14|SSF109755|TIGR02135 B2904_RS07490 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003439|IPR003593|IPR005670|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase|Phosphate transport system permease protein 1 GO:0005315|GO:0005524|GO:0016020|GO:0016887|GO:0035435 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF585|SM00382|SSF52540|TIGR00972 B2904_RS07495 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000515|IPR005672|IPR011864 ABC transporter type 1, transmembrane domain MetI-like|Phosphate ABC transporter, permease protein PstC|Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0006810|GO:0006817|GO:0016020|GO:0016021|GO:0035435 G3DSA:1.10.3720.10|PF00528|PTHR30425|PTHR30425:SF6|SSF161098|TIGR00974|TIGR02138 B2904_RS07500 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR024370 PBP domain G3DSA:3.40.190.10|PF12849|PTHR30570|PTHR30570:SF1|SSF53850 B2904_RS07510 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002226|IPR010582|IPR011614|IPR018028|IPR020835|IPR024708|IPR024711 Catalase active site|Catalase core domain|Catalase haem-binding site|Catalase immune-responsive domain|Catalase, mono-functional, haem-containing|Catalase, mono-functional, haem-containing, clades 1 and 3|Catalase-like domain GO:0004096|GO:0006979|GO:0020037|GO:0055114 G3DSA:2.40.180.10|PF00199|PF06628|PIRSF038928|PR00067|PS00437|PS00438|PTHR11465|SM01060|SSF56634 B2904_RS07515 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR012336 Thioredoxin-like fold G3DSA:3.40.30.10|PF13192|SSF52833 B2904_RS07520 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR012336 Thioredoxin-like fold G3DSA:3.40.30.10|PF13192|SSF52833 B2904_RS07525 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011060|IPR013785 Aldolase-type TIM barrel|Ribulose-phosphate binding barrel GO:0003824|GO:0008152 G3DSA:3.20.20.70|SSF51366 B2904_RS07530 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003352|IPR004501|IPR004796 Phosphotransferase system, EIIC|Phosphotransferase system, EIIC component, type 3|Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016020|GO:0016021 PF02378|PIRSF006351|PTHR33989|TIGR00410 B2904_RS07535 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005524 Predicted permease DUF318 PF03773|PTHR34184|PTHR34184:SF2 B2904_RS07540 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001845|IPR011991 HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01022|PR00778|PTHR33154|SM00418|SSF46785 B2904_RS07550 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002877|IPR015507|IPR029063 Ribosomal RNA large subunit methyltransferase E|Ribosomal RNA methyltransferase FtsJ domain|S-adenosyl-L-methionine-dependent methyltransferase GO:0001510|GO:0008168|GO:0032259 G3DSA:3.40.50.150|MF_01547|PF01728|PIRSF005461|PTHR10920|SSF53335 B2904_RS07555 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13181|PF14559|PTHR23083|SM00028|SSF48452 B2904_RS07560 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005149|IPR011991|IPR018309 Transcription regulator PadR, C-terminal|Transcription regulator PadR, N-terminal|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF03551|PF10400|PTHR33169|PTHR33169:SF4|SSF46785 B2904_RS07565 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR11360|PTHR11360:SF135|SSF103473 B2904_RS07570 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001155|IPR013785|IPR016040|IPR023753 Aldolase-type TIM barrel|FAD/NAD(P)-binding domain|NAD(P)-binding domain|NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0003824|GO:0010181|GO:0016491|GO:0055114 G3DSA:3.20.20.70|G3DSA:3.40.50.720|G3DSA:3.50.50.60|PF00724|PF07992|PR00368|PTHR22893|PTHR22893:SF7|SSF51395|SSF51905 B2904_RS07575 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003439|IPR003593|IPR004602|IPR013815|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ATP-grasp fold, subdomain 1|P-loop containing nucleoside triphosphate hydrolase|UvrABC system subunit A GO:0003824|GO:0005524|GO:0006289|GO:0009380|GO:0009381|GO:0016887 G3DSA:1.10.8.280|G3DSA:1.20.1580.10|G3DSA:3.30.1490.20|G3DSA:3.40.50.300|PF00005|PS00211|PTHR32282|PTHR32282:SF2|SM00382|SSF52540|TIGR00630 B2904_RS07585 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007197|IPR013785 Aldolase-type TIM barrel|Radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|PF04055|PTHR21339|SSF102114 B2904_RS07590 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR021729|IPR025303 Domain of unknown function DUF3298|Domain of unknown function DUF4163 G3DSA:3.30.565.40|G3DSA:3.90.640.20|PF11738|PF13739 B2904_RS07600 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000534|IPR000706|IPR012280|IPR016040|IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site|N-acetyl-gamma-glutamyl-phosphate reductase, type 1|NAD(P)-binding domain|Semialdehyde dehydrogenase, NAD-binding|Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0006526|GO:0008652|GO:0016620|GO:0046983|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_00150|PF01118|PF02774|PS01224|PTHR32338|PTHR32338:SF8|SM00859|SSF51735|SSF55347|TIGR01850 B2904_RS07605 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002813|IPR016117 ArgJ-like domain|Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 G3DSA:3.60.70.12|MF_01106|PD004193|PF01960|PTHR23100|PTHR23100:SF0|SSF56266|TIGR00120 B2904_RS07610 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001048|IPR001057|IPR004662 Acetylglutamate kinase|Aspartate/glutamate/uridylate kinase|Glutamate/acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526|GO:0006561 G3DSA:3.40.1160.10|MF_00082_B|PF00696|PIRSF000728|PR00474|PTHR23342|PTHR23342:SF2|SSF53633|TIGR00761 B2904_RS07625 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|PTHR24220:SF160|SM00382|SSF52540 B2904_RS07630 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PR00455|SSF46689|SSF48498 B2904_RS07640 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR025406 Domain of unknown function DUF4132 PF13569 B2904_RS07645 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR008007|IPR023367 Peptidase M42|Peptidase M42, domain 2 G3DSA:2.40.30.40|G3DSA:3.40.630.10|PF05343|PIRSF001123|PTHR32481|PTHR32481:SF0|SSF101821|SSF53187 B2904_RS07665 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR025906 Putative motility protein PF14070 B2904_RS07680 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000056|IPR011060|IPR013785|IPR026019 Aldolase-type TIM barrel|Ribulose-phosphate 3-epimerase|Ribulose-phosphate 3-epimerase-like|Ribulose-phosphate binding barrel GO:0003824|GO:0004750|GO:0005975|GO:0006098|GO:0008152|GO:0016857 G3DSA:3.20.20.70|PF00834|PIRSF001461|PS01086|PTHR11749|SSF51366|TIGR01163 B2904_RS07690 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|SM00448|SSF52172 B2904_RS07695 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000924|IPR001412|IPR004527|IPR008925|IPR014729|IPR020058|IPR020061|IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding|Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2|Aminoacyl-tRNA synthetase, class I, conserved site|Glutamate-tRNA ligase, bacterial/mitochondrial|Glutamyl/glutaminyl-tRNA synthetase|Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain|Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain|Rossmann-like alpha/beta/alpha sandwich fold GO:0000049|GO:0000166|GO:0004812|GO:0004818|GO:0005524|GO:0005737|GO:0006418|GO:0006424|GO:0016876|GO:0043039 G3DSA:1.10.10.350|G3DSA:1.10.1160.10|G3DSA:3.40.50.620|G3DSA:3.90.800.10|MF_00022_B|PF00749|PR00987|PS00178|PTHR11451|PTHR11451:SF41|SSF48163|SSF52374|TIGR00464 B2904_RS07700 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006674|IPR006675 HD domain|HDIG domain G3DSA:1.10.3210.10|PF01966|PTHR38659|PTHR38659:SF2|SSF109604|TIGR00277 B2904_RS07705 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|PF00857|PTHR11080|PTHR11080:SF2|SSF52499 B2904_RS07710 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001497|IPR008332|IPR011991|IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding|Methylated-DNA-[protein]-cysteine S-methyltransferase, active site|Methylguanine DNA methyltransferase, ribonuclease-like domain|Winged helix-turn-helix DNA-binding domain GO:0003824|GO:0003908|GO:0006281 G3DSA:1.10.10.10|PF01035|PS00374|PTHR10815|PTHR10815:SF5|SSF46767|SSF53155|TIGR00589 B2904_RS07715 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13302|PTHR13256|PTHR13256:SF24|SSF55729 B2904_RS07720 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PF00474|PTHR11819 B2904_RS07730 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002645 STAS domain G3DSA:3.30.750.24|PF01740|SSF52091 B2904_RS07735 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004534|IPR015421|IPR015424|IPR018319 L-seryl-tRNA selenium transferase-like|L-seryl-tRNA(Sec) selenium transferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0001514|GO:0003824|GO:0004125|GO:0005737 G3DSA:3.40.640.10|MF_00423|PF03841|PTHR32328|PTHR32328:SF0|SSF53383|TIGR00474 B2904_RS07745 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000093|IPR006171|IPR015967|IPR023627|IPR023628 DNA recombination protein RecR|Recombination protein RecR|Recombination protein RecR, C4-type zinc finger|Recombination protein RecR, conserved site|Toprim domain GO:0003677|GO:0006281|GO:0006310 MF_00017|PF02132|PF13662|PS01300|PTHR30446|PTHR30446:SF0|SM00493|SSF111304|TIGR00615 B2904_RS07750 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004401 Nucleoid-associated protein YbaB/EbfC family G3DSA:3.30.1310.10|PF02575|SSF82607 B2904_RS07780 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000150|IPR006379|IPR023214 Cof protein|HAD-like domain|HAD-superfamily hydrolase, subfamily IIB GO:0016787 G3DSA:3.40.50.1000|PF08282|PS01228|PS01229|PTHR10000|PTHR10000:SF1|SSF56784|TIGR00099|TIGR01484 B2904_RS07785 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000150|IPR006379|IPR023214 Cof protein|HAD-like domain|HAD-superfamily hydrolase, subfamily IIB GO:0016787 G3DSA:3.40.50.1000|PF08282|PS01228|PS01229|PTHR10000|PTHR10000:SF1|SSF56784|TIGR00099|TIGR01484 B2904_RS07810 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006109|IPR006168|IPR008927|IPR011128|IPR013328|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|Glycerol-3-phosphate dehydrogenase, NAD-dependent|Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal|Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal|NAD(P)-binding domain GO:0004367|GO:0005975|GO:0006072|GO:0009331|GO:0016491|GO:0016616|GO:0046168|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|MF_00394|PF01210|PF07479|PIRSF000114|PR00077|PS00957|PTHR11728|SSF48179|SSF51735 B2904_RS07820 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001732|IPR008927|IPR014026|IPR014027|IPR016040|IPR017476|IPR028357 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|UDP-glucose 6-dehydrogenase, bacterial type|UDP-glucose/GDP-mannose dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase, C-terminal|UDP-glucose/GDP-mannose dehydrogenase, N-terminal|UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0000271|GO:0003979|GO:0016616|GO:0051287|GO:0055114 G3DSA:1.20.5.100|G3DSA:3.40.50.720|PF00984|PF03720|PF03721|PIRSF000124|PIRSF500134|PTHR11374|PTHR11374:SF18|SM00984|SSF48179|SSF51735|SSF52413|TIGR03026 B2904_RS07825 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR029052 Metallo-dependent phosphatase-like G3DSA:3.60.21.10|SSF56300 B2904_RS07840 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23514|SSF103473 B2904_RS07845 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001269|IPR013785|IPR018517|IPR024036 Aldolase-type TIM barrel|tRNA-dihydrouridine synthase|tRNA-dihydrouridine synthase, conserved site|tRNA-dihydrouridine synthase, putative, C-terminal GO:0003824|GO:0008033|GO:0016491|GO:0017150|GO:0050660|GO:0055114 G3DSA:1.10.1200.80|G3DSA:3.20.20.70|PF01207|PIRSF006621|PS01136|PTHR11082|PTHR11082:SF25|SSF51395 B2904_RS07855 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002510|IPR025502 Metalloprotease TldD/PmbA|TldD GO:0006508|GO:0008237 PF01523|PIRSF004919|PTHR30624|PTHR30624:SF4|SSF111283 B2904_RS07860 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 PF01523|PTHR30624|PTHR30624:SF1|SSF111283 B2904_RS07865 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000462|IPR004570 CDP-alcohol phosphatidyltransferase|CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016020|GO:0016021|GO:0016780 PF01066|PIRSF000847|PS00379|PTHR14269|TIGR00560 B2904_RS07870 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR025641 Domain of unknown function DUF4340 PF14238 B2904_RS07875 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR032688 ABC-2 family transporter protein GO:0006810 PF12679|PTHR30294|PTHR30294:SF5 B2904_RS07880 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|PTHR24220:SF523|SM00382|SSF52540 B2904_RS07885 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005184|IPR012336 Domain of unknown function DUF306, Meta/HslJ|Thioredoxin-like fold G3DSA:3.40.30.10|PF03724 B2904_RS07890 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002110|IPR020683 Ankyrin repeat|Ankyrin repeat-containing domain GO:0005515 G3DSA:1.25.40.20|PF00023|PF12796|PR01415|PTHR24188|SM00248|SSF48403 B2904_RS07895 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004881|IPR010914|IPR012340|IPR027417 Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Ribosome biogenesis GTPase RsgA, putative|RsgA type GTPase domain GO:0003924|GO:0005525 G3DSA:1.10.40.50|G3DSA:2.40.50.140|G3DSA:3.40.50.300|MF_01820|PF03193|PTHR32120|PTHR32120:SF8|SSF50249|SSF52540|TIGR00157 B2904_RS07900 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR031811 AlgX, SGNH hydrolase-like domain PF16822 B2904_RS07905 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004299|IPR024194|IPR028362 Alginate O-acetyltransferase AlgI|Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB|Membrane bound O-acyl transferase, MBOAT GO:0042121 PF03062|PIRSF016636|PIRSF500217|PTHR13285|PTHR13285:SF24 B2904_RS07915 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001264|IPR001460|IPR012338|IPR023346 Beta-lactamase/transpeptidase-like|Glycosyl transferase, family 51|Lysozyme-like domain|Penicillin-binding protein, transpeptidase GO:0008658 G3DSA:1.10.3810.10|G3DSA:3.40.710.10|PF00905|PF00912|PTHR32282|PTHR32282:SF5|SSF53955|SSF56601|TIGR02074 B2904_RS07925 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR012933 HicA mRNA interferase family GO:0003729 G3DSA:3.30.920.30|PF07927|PTHR34873|PTHR34873:SF1|SSF54786 B2904_RS07930 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR031807 HicB-like antitoxin of toxin-antitoxin system PF15919|SSF143100 B2904_RS07935 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002068|IPR008978|IPR031107 Alpha crystallin/Hsp20 domain|HSP20-like chaperone|Small heat shock protein HSP20 G3DSA:2.60.40.790|PF00011|PTHR11527|PTHR11527:SF119|SSF49764 B2904_RS07940 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002068|IPR008978|IPR031107 Alpha crystallin/Hsp20 domain|HSP20-like chaperone|Small heat shock protein HSP20 G3DSA:2.60.40.790|PF00011|PTHR11527|SSF49764 B2904_RS07945 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 PF01741|PR01264|PTHR30266|PTHR30266:SF2|SSF81330|TIGR00220 B2904_RS07950 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000192|IPR015421|IPR015422|IPR015424|IPR020578|IPR024169 Aminotransferase class V domain|Aminotransferase class-V, pyridoxal-phosphate binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|PIRSF000524|PS00595|PTHR21152|PTHR21152:SF21|SSF53383 B2904_RS07955 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006139|IPR006140|IPR006236|IPR016040|IPR029009|IPR029752|IPR029753 Allosteric substrate binding domain|D-3-phosphoglycerate dehydrogenase|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain GO:0004617|GO:0006564|GO:0008152|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.30.1330.90|G3DSA:3.30.70.260|G3DSA:3.40.50.720|PF00389|PF02826|PS00065|PS00671|PTHR10996|PTHR10996:SF20|SSF143548|SSF51735|SSF52283|SSF55021|TIGR01327 B2904_RS07960 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006383|IPR023190|IPR023214 HAD-like domain|HAD-superfamily hydrolase, subfamily IB, PSPase-like|Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564|GO:0008152|GO:0016791 G3DSA:1.10.150.210|G3DSA:3.40.50.1000|PF00702|PTHR10000|PTHR10000:SF7|SSF56784|TIGR00338|TIGR01488 B2904_RS07970 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002205|IPR005743|IPR006691|IPR013758|IPR013760|IPR024946 Arginine repressor C-terminal-like domain|DNA gyrase, subunit A|DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel|DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta|DNA topoisomerase, type IIA, subunit A/C-terminal|DNA topoisomerase, type IIA-like domain GO:0003677|GO:0003916|GO:0003918|GO:0005524|GO:0005694|GO:0006259|GO:0006265 G3DSA:2.120.10.90|G3DSA:3.30.1360.40|G3DSA:3.90.199.10|MF_01897|PF00521|PF03989|PTHR10169|PTHR10169:SF48|SM00434|SSF101904|SSF56719|TIGR01063 B2904_RS07975 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 B2904_RS07985 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007260|IPR011060|IPR013785 Aldolase-type TIM barrel|Putative N-acetylmannosamine-6-phosphate epimerase|Ribulose-phosphate binding barrel GO:0003824|GO:0006051|GO:0008152|GO:0047465 G3DSA:3.20.20.70|MF_01235|PF04131|PTHR36204|PTHR36204:SF1|SSF51366 B2904_RS07995 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001460|IPR005311|IPR012338 Beta-lactamase/transpeptidase-like|Penicillin-binding protein, dimerisation domain|Penicillin-binding protein, transpeptidase GO:0008658 G3DSA:3.40.710.10|G3DSA:3.90.1310.10|PF00905|PF03717|PTHR30627|PTHR30627:SF1|SSF54184|SSF56519|SSF56601 B2904_RS08010 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SM00028|SSF48452 B2904_RS08015 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001943|IPR003729 Bifunctional nuclease domain|UVR domain GO:0004518|GO:0005515 PF02151|PF02577|PTHR15160|PTHR15160:SF1|SSF103256 B2904_RS08025 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003142|IPR004143|IPR004408 Biotin protein ligase, C-terminal|Biotin--acetyl-CoA-carboxylase ligase|Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0004077|GO:0006464 G3DSA:2.30.30.100|G3DSA:3.30.930.10|PF02237|PF03099|PTHR12835|SSF55681|TIGR00121 B2904_RS08030 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 G3DSA:2.30.30.40|G3DSA:2.40.50.180|PF01584|PTHR22617|SM00260|SSF50341 B2904_RS08035 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000238|IPR015946|IPR023799 K homology domain-like, alpha/beta|Ribosome-binding factor A|Ribosome-binding factor A domain GO:0006364 G3DSA:3.30.300.20|MF_00003|PD007327|PF02033|PTHR33515|SSF89919|TIGR00082 B2904_RS08040 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001667|IPR003156 DDH domain|DHHA1 domain GO:0003676 G3DSA:3.90.1640.10|PF01368|PF02272|SSF64182 B2904_RS08045 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002156|IPR012337 Ribonuclease H domain|Ribonuclease H-like domain GO:0003676|GO:0004523 G3DSA:3.30.420.10|PF00075|PTHR10642|SSF53098 B2904_RS08050 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000595|IPR011990|IPR014710|IPR018490|IPR019734 Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|G3DSA:2.60.120.10|PF00027|PF13174|PTHR24567|SM00028|SM00100|SSF48452|SSF51206 B2904_RS08055 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000595|IPR011991|IPR014710|IPR018488|IPR018490 Cyclic nucleotide-binding domain|Cyclic nucleotide-binding, conserved site|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PS00889|PTHR24567|PTHR24567:SF30|SM00100|SSF46785|SSF51206 B2904_RS08065 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13181|PTHR23083|SM00028|SSF48452 B2904_RS08070 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003961|IPR013320|IPR013783 Concanavalin A-like lectin/glucanase domain|Fibronectin type III|Immunoglobulin-like fold GO:0005515 G3DSA:2.60.120.200|G3DSA:2.60.40.10|PF00041|SM00060|SSF49265|SSF49899 B2904_RS08075 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|SSF56300 B2904_RS08090 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 MF_01876|PF04227|PTHR10584|PTHR10584:SF1|SSF110581 B2904_RS08095 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004039|IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain|Rubredoxin-type fold G3DSA:2.20.28.10|PF09723|PTHR34404|SM00834|TIGR02605 B2904_RS08105 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003141|IPR004013|IPR016195 PHP domain|Polymerase/histidinol phosphatase, N-terminal|Polymerase/histidinol phosphatase-like GO:0003677|GO:0003824|GO:0003887|GO:0006260 G3DSA:3.20.20.140|PF02811|PTHR36928|SM00481|SSF89550 B2904_RS08110 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR026865|IPR027417 Cytidylate kinase-like family|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13189 B2904_RS08115 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR008254|IPR029039 Flavodoxin/nitric oxide synthase|Flavoprotein-like domain GO:0010181 G3DSA:3.40.50.360|PF00258|PTHR32145|PTHR32145:SF19|SSF52218 B2904_RS08130 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001440|IPR011990|IPR019734|IPR021352 Protein of unknown function DUF2971|Tetratricopeptide repeat|Tetratricopeptide repeat 1|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF00515|PF11185|PF13181|PF13424|PTHR23083|SM00028|SSF48452 B2904_RS08140 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR014825|IPR016024 Armadillo-type fold|DNA alkylation repair enzyme GO:0005488 G3DSA:1.25.40.290|PF08713|PTHR34070|PTHR34070:SF1|SSF48371 B2904_RS08145 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006158|IPR006638|IPR007197|IPR023404|IPR023970 Cobalamin (vitamin B12)-binding domain|Elongator protein 3/MiaB/NifB|Methylthiotransferase/radical SAM-type protein|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0031419|GO:0046872|GO:0051536 G3DSA:3.80.30.20|PF02310|PF04055|PTHR11918|PTHR11918:SF64|SM00729|SSF102114 B2904_RS08150 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|PTHR37694|SSF51182 B2904_RS08155 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|PTHR31302|PTHR31302:SF6|SSF56300 B2904_RS08165 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002133|IPR022628|IPR022629|IPR022630|IPR022631|IPR022636 S-adenosylmethionine synthetase|S-adenosylmethionine synthetase superfamily|S-adenosylmethionine synthetase, C-terminal|S-adenosylmethionine synthetase, N-terminal|S-adenosylmethionine synthetase, central domain|S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0005524|GO:0006556 G3DSA:3.30.300.10|MF_00086|PF00438|PF02772|PF02773|PIRSF000497|PS00376|PS00377|PTHR11964|SSF55973|TIGR01034 B2904_RS08170 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005025|IPR029039 Flavoprotein-like domain|NADPH-dependent FMN reductase-like GO:0016491 G3DSA:3.40.50.360|PF03358|PTHR10204|PTHR10204:SF38|SSF52218 B2904_RS08175 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 G3DSA:3.40.50.1580|PF01048|SSF53167 B2904_RS08180 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001395|IPR018170|IPR020471|IPR023210 Aldo/keto reductase|Aldo/keto reductase, conserved site|Aldo/keto reductase/potassium channel subunit beta|NADP-dependent oxidoreductase domain GO:0016491|GO:0055114 G3DSA:3.20.20.100|PF00248|PIRSF000097|PR00069|PS00062|PS00063|PTHR11732|SSF51430 B2904_RS08190 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001270|IPR003593|IPR003959|IPR004176|IPR017730|IPR018368|IPR019489|IPR027417|IPR028299 AAA+ ATPase domain|ATPase, AAA-type, core|Chaperonin ClpB|Clp ATPase, C-terminal|Clp, N-terminal|ClpA/B family|ClpA/B, conserved site 1|ClpA/B, conserved site 2|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0005737|GO:0009408|GO:0016485|GO:0019538 G3DSA:1.10.1780.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00004|PF02861|PF07724|PF10431|PR00300|PS00870|PS00871|PTHR11638|PTHR11638:SF18|SM00382|SM01086|SSF52540|SSF81923|TIGR03346 B2904_RS08195 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006665 OmpA-like domain G3DSA:3.30.1330.60|PF00691|SSF103088 B2904_RS08215 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000417|IPR029056 Hydroxyethylthiazole kinase|Ribokinase-like GO:0004417|GO:0009228 G3DSA:3.40.1190.20|MF_00228|PF02110|PIRSF000513|PR01099|PTHR20857|PTHR20857:SF19|SSF53613|TIGR00694 B2904_RS08220 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain PF07670|PTHR32089|PTHR32089:SF50 B2904_RS08225 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003251|IPR004039|IPR009078|IPR012347 Ferritin-like superfamily|Ferritin-related|Rubredoxin-type fold|Rubrerythrin GO:0016491|GO:0046872|GO:0055114 G3DSA:1.20.1260.10|G3DSA:2.20.28.10|PF02915|PTHR33746|SSF47240|SSF57802 B2904_RS08230 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001279|IPR001587|IPR004613|IPR011108|IPR030854 Metallo-beta-lactamase|Ribonuclease J|Ribonuclease J, bacteria|Ribonuclease J, conserved site|Zn-dependent metallo-hydrolase, RNA specificity domain GO:0003723|GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0046872|GO:0090501 G3DSA:3.60.15.10|MF_01491|PF00753|PF07521|PIRSF004803|PS01292|PTHR11203|PTHR11203:SF22|SM00849|SSF56281|TIGR00649 B2904_RS08235 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002142|IPR004635|IPR029045 ClpP/crotonase-like domain|Peptidase S49|Peptidase S49, SppA GO:0006508|GO:0008233 G3DSA:3.90.226.10|PF01343|PTHR33209|SSF52096|TIGR00706 B2904_RS08245 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005495 Permease LptG/LptF-related GO:0016021 PF03739|PTHR33529|PTHR33529:SF2 B2904_RS08250 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002035|IPR011042|IPR011990 Six-bladed beta-propeller, TolB-like|Tetratricopeptide-like helical domain|von Willebrand factor, type A GO:0005515 G3DSA:1.25.40.10|G3DSA:2.120.10.30|PF17170|PTHR24103|PTHR24103:SF378|SSF101898|SSF48452|SSF53300 B2904_RS08260 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000189|IPR008258|IPR023346 Lysozyme-like domain|Prokaryotic transglycosylase, active site|Transglycosylase SLT domain 1 GO:0000270|GO:0008933|GO:0016020 G3DSA:1.10.530.10|PF01464|PS00922|PTHR21666|SSF53955 B2904_RS08265 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR012823|IPR013750 Flagellar export FliJ|GHMP kinase, C-terminal domain GO:0009288|GO:0071973 G3DSA:3.30.70.890|PF02050 B2904_RS08270 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000194|IPR003593|IPR005714|IPR020003|IPR027417|IPR032463 AAA+ ATPase domain|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|ATPase, type III secretion system, FliI|ATPase, type III secretion system, FliI/YscN|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257|GO:0044780 G3DSA:3.40.50.300|PF00006|PS00152|PTHR15184|PTHR15184:SF9|SM00382|SSF52540|TIGR01026 B2904_RS08275 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE PF02108|PTHR34982|PTHR34982:SF1 B2904_RS08280 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000090|IPR011002|IPR023087|IPR028263|IPR032779 Flagellar motor switch protein FliG|Flagellar motor switch protein FliG, C-terminal|Flagellar motor switch protein FliG, N-terminal domain|Flagellar motor switch protein FliG, alpha-helical|Flagellar motor switch protein FliG, middle domain GO:0003774|GO:0006935|GO:0009288|GO:0071973 G3DSA:1.10.220.30|PF01706|PF14841|PF14842|PIRSF003161|PR00954|PTHR30534|PTHR30534:SF0|SSF48029|TIGR00207 B2904_RS08285 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000067|IPR006182|IPR013556 Flagellar M-ring C-terminal|Flagellar M-ring protein FliF|Secretory protein YscJ/FliF GO:0003774|GO:0009431|GO:0071973 PF01514|PF08345|PR01009|PTHR30046|PTHR30046:SF0|TIGR00206 B2904_RS08290 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR008136 CinA, C-terminal G3DSA:3.90.950.20|PF02464|PTHR13939|SSF142433|TIGR00199 B2904_RS08295 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR008407 Branched-chain amino acid transport, AzlD PF05437|PIRSF003203 B2904_RS08300 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011606 Branched-chain amino acid transport, permease PF03591|PTHR34979 B2904_RS08305 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005627|IPR023648 Copper homeostasis CutC domain|Copper homeostasis protein CutC GO:0005507|GO:0055070 G3DSA:3.20.20.380|PF03932|PTHR12598|PTHR12598:SF0|SSF110395 B2904_RS08310 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR024445 ISXO2-like transposase domain PF12762|SM01126 B2904_RS08325 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000889|IPR012336|IPR029760 Glutathione peroxidase|Glutathione peroxidase conserved site|Thioredoxin-like fold GO:0004602|GO:0006979|GO:0055114 G3DSA:3.40.30.10|PF00255|PIRSF000303|PR01011|PS00763|PTHR11592|SSF52833 B2904_RS08330 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000889|IPR012336 Glutathione peroxidase|Thioredoxin-like fold GO:0004602|GO:0006979|GO:0055114 G3DSA:3.40.30.10|PF00255|SSF52833 B2904_RS08335 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR012336|IPR013740|IPR018219 Redoxin|Thiol peroxidase conserved site|Thioredoxin-like fold GO:0016491|GO:0016684|GO:0055114 G3DSA:3.40.30.10|PF08534|PS01265|PTHR10681|PTHR10681:SF81|SSF52833 B2904_RS08340 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000713|IPR004101|IPR005761|IPR013221 Mur ligase, C-terminal|Mur ligase, N-terminal catalytic domain|Mur ligase, central|UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0009058|GO:0016874|GO:0016881|GO:0051301 G3DSA:3.40.1190.10|G3DSA:3.40.1390.10|G3DSA:3.90.190.20|MF_00208|PF01225|PF02875|PF08245|PTHR23135|PTHR23135:SF4|SSF53244|SSF53623|SSF63418|TIGR01085 B2904_RS08345 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic SSF58100 B2904_RS08350 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002903|IPR023397|IPR029063 Ribosomal RNA small subunit methyltransferase H|S-adenosyl-L-methionine-dependent methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 G3DSA:1.10.150.170|G3DSA:3.40.50.150|MF_01007|PF01795|PIRSF004486|PTHR11265|PTHR11265:SF0|SSF53335|SSF81799|TIGR00006 B2904_RS08355 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001650|IPR001943|IPR004807|IPR006935|IPR014001|IPR024759|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|UVR domain|UvrABC system, subunit B|UvrB, YAD/RRR-motif-containing domain GO:0003677|GO:0005515|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432|GO:0016787 G3DSA:3.30.2060.10|G3DSA:3.40.50.300|G3DSA:4.10.860.10|MF_00204|PF00271|PF02151|PF04851|PF12344|PTHR24029|SM00487|SM00490|SSF46600|SSF52540|TIGR00631 B2904_RS08360 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|PIRSF006603|PTHR11206|PTHR11206:SF107|TIGR00797 B2904_RS08365 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR013830 SGNH hydrolase-type esterase domain G3DSA:3.40.50.1110|PF13472|PTHR30383|SSF52266 B2904_RS08380 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000182|IPR016181|IPR025685 Acyl-CoA N-acyltransferase|GNAT domain|YoaP-like domain GO:0008080 G3DSA:3.40.630.30|PF00583|PF14268|SSF55729 B2904_RS08385 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 G3DSA:3.40.1130.10|PF01553|PTHR10434|SM00563|SSF69593 B2904_RS08395 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR026906|IPR032675 Leucine rich repeat 5|Leucine-rich repeat domain, L domain-like G3DSA:3.80.10.10|PF13306|PTHR11017|SSF52058 B2904_RS08400 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR026906 Leucine rich repeat 5 PF13306|PTHR11017 B2904_RS08420 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR013830 SGNH hydrolase-type esterase domain G3DSA:3.40.50.1110|SSF52266 B2904_RS08425 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004299|IPR024194|IPR028362 Alginate O-acetyltransferase AlgI|Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB|Membrane bound O-acyl transferase, MBOAT GO:0042121 PF03062|PIRSF016636|PIRSF500217|PTHR13285|PTHR13285:SF24 B2904_RS08430 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002694|IPR006171|IPR006295|IPR013264|IPR030846 DNA primase DnaG, bacteria|DNA primase, DnaG|DNA primase, catalytic core, N-terminal|Toprim domain|Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0006269|GO:0008270 G3DSA:3.40.1360.10|G3DSA:3.90.580.10|G3DSA:3.90.980.10|MF_00974|PF01807|PF08275|PF13155|PTHR30313|SM00400|SM00493|SSF56731|SSF57783|TIGR01391 B2904_RS08435 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000943|IPR007127|IPR007624|IPR007627|IPR007630|IPR009042|IPR011991|IPR012760|IPR013324|IPR013325|IPR014284|IPR028630 RNA polymerase sigma factor 70, region 1.1|RNA polymerase sigma factor RpoD|RNA polymerase sigma factor RpoD, C-terminal|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 1.2|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 3|RNA polymerase sigma-70 region 4|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.601.10|MF_00963|PF00140|PF03979|PF04539|PF04542|PF04545|PR00046|PS00715|PS00716|PTHR30603|PTHR30603:SF0|SSF88659|SSF88946|TIGR02393|TIGR02937 B2904_RS08440 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000873|IPR020459|IPR020845 AMP-binding|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.40.50.980|PF00501|PR00154|PS00455|PTHR24096|PTHR24096:SF199|SSF56801 B2904_RS08445 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001296 Glycosyl transferase, family 1 G3DSA:3.40.50.2000|PF00534|PTHR12526|SSF53756 B2904_RS08450 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR012336 Thioredoxin-like fold G3DSA:3.40.30.10|SSF52833 B2904_RS08455 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005524 Predicted permease DUF318 PF03773|PTHR34184|PTHR34184:SF4 B2904_RS08465 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic G3DSA:3.40.190.10|PF13379|SSF53850 B2904_RS08475 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30151|SSF161098 B2904_RS08480 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|SM00382|SSF52540 B2904_RS08485 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004927 Alkylmercury lyase GO:0018836|GO:0046413 PF03243|SSF160387 B2904_RS08500 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000565|IPR001241|IPR002288|IPR003594|IPR006171|IPR011557|IPR013506|IPR013759|IPR013760|IPR014721|IPR018522|IPR020568 DNA gyrase B subunit, C-terminal|DNA gyrase, subunit B|DNA topoisomerase, type IIA|DNA topoisomerase, type IIA, central domain|DNA topoisomerase, type IIA, conserved site|DNA topoisomerase, type IIA, subunit B|DNA topoisomerase, type IIA, subunit B, domain 2|DNA topoisomerase, type IIA-like domain|Histidine kinase-like ATPase, C-terminal domain|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Toprim domain GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 G3DSA:3.30.230.10|G3DSA:3.30.565.10|G3DSA:3.40.50.670|MF_01898|PF00204|PF00986|PF01751|PF02518|PR00418|PR01159|PS00177|PTHR10169|SM00387|SM00433|SSF54211|SSF55874|SSF56719|TIGR01059 B2904_RS08505 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000103|IPR023753 FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF13738|PR00368|PR00469|PTHR22912|SSF51905 B2904_RS08510 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 G3DSA:3.40.50.270|PF02302|SSF52794 B2904_RS08515 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004843|IPR006179|IPR008334|IPR029052 5'-Nucleotidase, C-terminal|5'-Nucleotidase/apyrase|Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0009166|GO:0016787 G3DSA:3.60.21.10|G3DSA:3.90.780.10|PF00149|PF02872|PR01607|PTHR11575|PTHR11575:SF6|SSF55816|SSF56300 B2904_RS08520 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 G3DSA:3.40.630.40|PF01520|PTHR30404|PTHR30404:SF0|SM00646|SSF53187 B2904_RS08525 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000380|IPR003601|IPR003602|IPR005733|IPR006171|IPR013497|IPR013498|IPR013824|IPR013825|IPR023405|IPR023406|IPR028612 DNA topoisomerase I, bacterial-type|DNA topoisomerase I, type IA|DNA topoisomerase, type IA|DNA topoisomerase, type IA, DNA-binding domain|DNA topoisomerase, type IA, active site|DNA topoisomerase, type IA, central|DNA topoisomerase, type IA, central region, subdomain 1|DNA topoisomerase, type IA, central region, subdomain 2|DNA topoisomerase, type IA, core domain|DNA topoisomerase, type IA, domain 2|DNA topoisomerase, type IA, zn finger|Toprim domain GO:0003677|GO:0003916|GO:0003917|GO:0005694|GO:0006265 G3DSA:1.10.460.10|G3DSA:2.70.20.10|G3DSA:3.30.65.10|G3DSA:3.40.50.140|MF_00952|PF01131|PF01396|PF01751|PR00417|PS00396|PTHR11390|PTHR11390:SF27|SM00436|SM00437|SM00493|SSF56712|SSF57783|TIGR01051 B2904_RS08530 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003488|IPR011991 DNA recombination-mediator protein A|Winged helix-turn-helix DNA-binding domain GO:0009294 G3DSA:1.10.10.10|G3DSA:3.40.50.450|PF02481|PTHR32039|PTHR32039:SF8|SSF102405|SSF46785|TIGR00732 B2904_RS08535 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PTHR23083|SM00028|SSF48452 B2904_RS08540 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011040 Sialidases G3DSA:2.120.10.10|SSF50939 B2904_RS08545 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011040 Sialidases G3DSA:2.120.10.10|PF13859|SSF50939 B2904_RS08555 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011040 Sialidases G3DSA:2.120.10.10|PF13088|SSF50939 B2904_RS08560 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR008209|IPR008210|IPR013035|IPR018091 Phosphoenolpyruvate carboxykinase, C-terminal|Phosphoenolpyruvate carboxykinase, GTP-utilising|Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site|Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0004613|GO:0005525|GO:0006094|GO:0017076 G3DSA:3.40.449.10|G3DSA:3.90.228.20|MF_00452|PF00821|PIRSF001348|PS00505|PTHR11561|SSF53795|SSF68923 B2904_RS08565 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR014864|IPR023860 Transcription factor, NikR, nickel binding C-terminal|[FeFe]-hydrogenase system regulator TM1266 G3DSA:3.30.70.1150|PF08753|SSF55021|TIGR03959 B2904_RS08570 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007197|IPR010722|IPR013785|IPR024007 Aldolase-type TIM barrel|Biotin and thiamin synthesis-associated domain|Radical SAM|[FeFe]-hydrogenase maturation HydG, radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|PF04055|PF06968|PTHR22976|PTHR22976:SF2|SM00876|SSF102114|TIGR03955 B2904_RS08575 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005225|IPR006073|IPR023873|IPR027417 GTP binding domain|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|[FeFe]-hydrogenase H-cluster maturation GTPase HydF GO:0005525 G3DSA:3.40.50.300|PF01926|PTHR11649|PTHR11649:SF59|SSF52540|TIGR00231|TIGR03918 B2904_RS08585 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002678 GTP cyclohydrolase 1 type 2/Nif3 G3DSA:3.30.70.830|PTHR41774|PTHR41774:SF2|SSF102705 B2904_RS08590 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13673|PTHR23091|PTHR23091:SF210|SSF55729 B2904_RS08595 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|PIRSF006603|PTHR11206|PTHR11206:SF132 B2904_RS08600 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002818|IPR029062 Class I glutamine amidotransferase-like|DJ-1/PfpI G3DSA:3.40.50.880|PF01965|PTHR11019|PTHR11019:SF4|SSF52317 B2904_RS08605 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001296|IPR011835|IPR013534 Bacterial/plant glycogen synthase|Glycosyl transferase, family 1|Starch synthase, catalytic domain GO:0004373 G3DSA:3.40.50.2000|MF_00484|PF00534|PF08323|PTHR12526|PTHR12526:SF17|SSF53756|TIGR02095 B2904_RS08625 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 PF03806|PTHR30282|PTHR30282:SF1 B2904_RS08630 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001261|IPR002933|IPR010161|IPR011650 ArgE/DapE/ACY1/CPG2/YscS, conserved site|Peptidase M20|Peptidase M20, dimerisation domain|Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006508|GO:0006518|GO:0008152|GO:0008237|GO:0008270|GO:0016787|GO:0045148 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PIRSF037215|PS00758|PS00759|PTHR11014|PTHR11014:SF3|SSF53187|SSF55031|TIGR01882 B2904_RS08635 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002085|IPR011032|IPR013154 Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, N-terminal|GroES-like GO:0008270|GO:0016491|GO:0055114 G3DSA:3.90.180.10|PF08240|PTHR11695|PTHR11695:SF429|SSF50129 B2904_RS08640 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR012816 Conserved hypothetical protein CHP02464 PF08719|PTHR11079|PTHR11079:SF10|SSF143990|TIGR02464 B2904_RS08645 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002110|IPR020683 Ankyrin repeat|Ankyrin repeat-containing domain GO:0005515 G3DSA:1.25.40.20|PF12796|PTHR24123|SM00248|SSF48403 B2904_RS08655 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001264|IPR001460|IPR011815|IPR012338|IPR023346 Beta-lactamase/transpeptidase-like|Glycosyl transferase, family 51|Lysozyme-like domain|Penicillin-binding protein 1C|Penicillin-binding protein, transpeptidase GO:0008658|GO:0008955|GO:0009252 G3DSA:1.10.3810.10|G3DSA:3.40.710.10|PF00905|PF00912|PTHR32282|PTHR32282:SF0|SSF53955|SSF56601|TIGR02073 B2904_RS08660 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006860 FecR protein PF04773 B2904_RS08665 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|PTHR30055|SSF46689|SSF48498 B2904_RS08670 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004477|IPR025405 ComEC/Rec2-related protein|Domain of unknown function DUF4131 PF03772|PF13567|PTHR30619|TIGR00360 B2904_RS08685 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011042 Six-bladed beta-propeller, TolB-like G3DSA:2.120.10.30|SSF82171 B2904_RS08690 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002942|IPR006145|IPR006224|IPR006225|IPR020103 Pseudouridine synthase, RluC/RluD|Pseudouridine synthase, RluC/RluD, conserved site|Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.10.290.10|PF00849|PF01479|PS01129|PTHR11079|PTHR11079:SF73|SM00363|SSF55120|SSF55174|TIGR00005 B2904_RS08695 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011962|IPR029054 Deoxycytidine triphosphate deaminase|dUTPase-like GO:0006229|GO:0008829 G3DSA:2.70.40.10|MF_00146|PTHR11241|PTHR11241:SF1|SSF51283|TIGR02274 B2904_RS08700 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001672|IPR018189 Phosphoglucose isomerase (PGI)|Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 G3DSA:3.40.50.10490|MF_00473|PF00342|PR00662|PS00174|PS00765|PTHR11469|SSF53697 B2904_RS08705 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001444|IPR010930|IPR012834|IPR019776|IPR020013 Fagellar hook-basal body protein, FlgE/F/G|Flagellar basal body rod protein, N-terminal|Flagellar basal body rod protein, conserved site|Flagellar basal-body rod FlgG|Flagellar basal-body/hook protein, C-terminal domain GO:0009426|GO:0071973 PF00460|PF06429|PS00588|PTHR30435|PTHR30435:SF19|SSF117143|TIGR02488|TIGR03506 B2904_RS08710 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR008258|IPR023346 Lysozyme-like domain|Transglycosylase SLT domain 1 G3DSA:1.10.530.10|PF01464|PTHR21666|SSF53955 B2904_RS08715 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001440|IPR006597|IPR011990|IPR013105|IPR019734 Sel1-like repeat|Tetratricopeptide repeat|Tetratricopeptide repeat 1|Tetratricopeptide repeat 2|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF00515|PF07719|PF13181|PF13424|PF13432|PTHR23083|SM00028|SM00671|SSF48452 B2904_RS08725 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR19211|PTHR19211:SF54|SM00382|SSF52540 B2904_RS08735 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004468|IPR017456|IPR017926|IPR027417|IPR029062 CTP synthase|CTP synthase, N-terminal|Class I glutamine amidotransferase-like|Glutamine amidotransferase|P-loop containing nucleoside triphosphate hydrolase GO:0003883|GO:0006221 G3DSA:3.40.50.300|G3DSA:3.40.50.880|MF_01227|PF00117|PF06418|PTHR11550|SSF52317|SSF52540|TIGR00337 B2904_RS08740 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003099|IPR008927|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 G3DSA:3.40.50.720|PF02153|PTHR21363|PTHR21363:SF0|SSF48179|SSF51735 B2904_RS08750 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR22916|SSF53448 B2904_RS08755 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002563|IPR004039|IPR012349|IPR018527|IPR024935 FMN-binding split barrel|Flavin reductase like domain|Rubredoxin domain|Rubredoxin, iron-binding site|Rubredoxin-type fold GO:0005506|GO:0010181|GO:0016491|GO:0046872|GO:0055114 G3DSA:2.20.28.10|G3DSA:2.30.110.10|PF00301|PF01613|PS00202|PTHR30466|SM00903|SSF50475|SSF57802 B2904_RS08760 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006127|IPR006128|IPR006129 Adhesin B|Adhesion lipoprotein|Periplasmic solute binding protein, ZnuA-like GO:0007155|GO:0030001|GO:0046872 G3DSA:3.40.50.1980|PF01297|PR00690|PR00691|PTHR30477|PTHR30477:SF1|SSF53807 B2904_RS08765 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF566|SM00382|SSF52540 B2904_RS08775 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000640|IPR000795|IPR004161|IPR005225|IPR006297|IPR009000|IPR009022|IPR013842|IPR027417|IPR031157 Elongation factor 4|Elongation factor G, III-V domain|GTP-binding protein LepA, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFG, V domain|Translation elongation factor EFTu/EF1A, domain 2|Translation protein, beta-barrel domain GO:0003924|GO:0005525 G3DSA:2.40.30.10|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|MF_00071|PF00009|PF00679|PF03144|PF06421|PR00315|PS00301|PTHR23115|PTHR23115:SF97|SSF50447|SSF52540|SSF54980|TIGR00231|TIGR01393 B2904_RS08785 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005146|IPR020825 B3/B4 tRNA-binding domain|Phenylalanyl-tRNA synthetase, B3/B4 GO:0003723|GO:0004826 G3DSA:3.50.40.10|PF03483|PTHR39209|PTHR39209:SF2|SM00873|SSF56037 B2904_RS08795 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR024445 ISXO2-like transposase domain PF12762|SM01126 B2904_RS08805 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001440|IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide repeat 1|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF00515|SM00028|SSF48452 B2904_RS08810 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006638|IPR007197|IPR018768|IPR023404|IPR023862|IPR023970 Conserved hypothetical protein CHP03960, radical SAM|Domain of unknown function DUF2344|Elongator protein 3/MiaB/NifB|Methylthiotransferase/radical SAM-type protein|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0051536 G3DSA:3.80.30.20|PF04055|PF10105|PTHR11918|PTHR11918:SF77|SM00729|SSF102114|TIGR03936|TIGR03960 B2904_RS08815 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR013217|IPR029063 Methyltransferase type 12|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF08242|SSF53335 B2904_RS08820 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR008183|IPR011013|IPR014718|IPR015443|IPR018052 Aldose 1-/Glucose-6-phosphate 1-epimerase|Aldose 1-epimerase|Aldose 1-epimerase, conserved site|Galactose mutarotase-like domain|Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0016853|GO:0019318|GO:0030246 G3DSA:2.70.98.10|PF01263|PIRSF005096|PS00545|PTHR10091|PTHR10091:SF0|SSF74650 B2904_RS08825 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR008909|IPR009080|IPR015944 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|DALR anticodon binding|Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004812|GO:0004814|GO:0004820|GO:0005524|GO:0005737|GO:0006418|GO:0006420|GO:0006426 G3DSA:1.10.730.10|PF02092|PF05746|PR01045|PTHR30075|SSF109604|TIGR00211 B2904_RS08830 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003740 Uncharacterised membrane protein YitT PF02588|PTHR40078|PTHR40078:SF1 B2904_RS08835 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000835|IPR011991|IPR023187 MarR-type HTH domain|Transcriptional regulator MarR-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PR00598|PS01117|PTHR33164|SM00347|SSF46785 B2904_RS08840 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR021533 Putative beta-lactamase-inhibitor-like, PepSY-like PF11396|SSF160574 B2904_RS08855 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004604|IPR027417 DNA recombination/repair protein RecN|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006281|GO:0006310 G3DSA:3.40.50.300|PF13476|PIRSF003128|PTHR11059|SSF52540|TIGR00634 B2904_RS08860 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000415|IPR029479 Nitroreductase|Nitroreductase-like GO:0016491 G3DSA:3.40.109.10|PF00881|PTHR23026|PTHR23026:SF103|SSF55469 B2904_RS08865 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 PF03186|PTHR34308|PTHR34308:SF1 B2904_RS08870 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 B2904_RS08875 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR013078|IPR029033 Histidine phosphatase superfamily|Histidine phosphatase superfamily, clade-1 G3DSA:3.40.50.1240|PF00300|PTHR23029|PTHR23029:SF1|SM00855|SSF53254 B2904_RS08880 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002641|IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase|Patatin/Phospholipase A2-related GO:0006629|GO:0008152 G3DSA:3.40.1090.10|PF01734|PTHR14226|SSF52151 B2904_RS08885 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10 B2904_RS08890 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR010979|IPR012319|IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding|Formamidopyrimidine-DNA glycosylase, catalytic domain|Ribosomal protein S13-like, H2TH GO:0003676|GO:0003684|GO:0003906|GO:0006284|GO:0006289|GO:0008270|GO:0016799 G3DSA:1.10.8.50|G3DSA:3.20.190.10|PF06831|SM01232|SSF46946|SSF81624 B2904_RS08895 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000424|IPR011344|IPR012340 Nucleic acid-binding, OB-fold|Primosome PriB/single-strand DNA-binding|Single-stranded DNA-binding protein GO:0003697|GO:0006260 G3DSA:2.40.50.140|PF00436|PIRSF002070|PTHR10302|SSF50249|TIGR00621 B2904_RS08900 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR018094|IPR018095|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Thymidylate kinase|Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 G3DSA:3.40.50.300|MF_00165|PF02223|PS01331|PTHR10344|SSF52540|TIGR00041 B2904_RS08910 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|PTHR24321|PTHR24321:SF6|SSF51735 B2904_RS08915 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001001|IPR022634|IPR022635|IPR022637 DNA polymerase III, beta chain|DNA polymerase III, beta chain, C-terminal|DNA polymerase III, beta chain, N-terminal|DNA polymerase III, beta chain, central GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 G3DSA:3.10.150.10|PF00712|PF02767|PF02768|PIRSF000804|PTHR30478|SM00480|SSF55979|TIGR00663 B2904_RS08940 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001437|IPR006359|IPR018151|IPR022691|IPR023459|IPR028624 Transcription elongation factor GreA|Transcription elongation factor GreA/GreB|Transcription elongation factor GreA/GreB family|Transcription elongation factor, GreA/GreB, C-terminal|Transcription elongation factor, GreA/GreB, N-terminal|Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784|GO:0070063 G3DSA:1.10.287.180|G3DSA:3.10.50.30|MF_00105|PF01272|PF03449|PIRSF006092|PS00829|PTHR30437|SSF46557|SSF54534|TIGR01462 B2904_RS08945 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 MF_01043|PF02660|PTHR30309|PTHR30309:SF0|SM01207|TIGR00023 B2904_RS08950 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005225|IPR006073|IPR015946|IPR016484|IPR027417|IPR032859 GTP binding domain|GTP-binding protein EngA|GTPase Der, C-terminal KH-domain-like|K homology domain-like, alpha/beta|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain GO:0005525 G3DSA:3.30.300.20|G3DSA:3.40.50.300|MF_00195|PF01926|PF14714|PIRSF006485|PR00326|PTHR11649|PTHR11649:SF5|SSF52540|TIGR00231|TIGR03594 B2904_RS08960 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002677|IPR011332 Ribosomal protein L32p|Zinc-binding ribosomal protein GO:0003735|GO:0006412|GO:0015934 MF_00340|PF01783|PTHR21026|SSF57829|TIGR01031 B2904_RS08965 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003664|IPR012281|IPR024084 Fatty acid synthesis PlsX protein|Isopropylmalate dehydrogenase-like domain|Phospholipid biosynthesis protein, PlsX-like GO:0003824|GO:0006633|GO:0016616|GO:0016747|GO:0055114 G3DSA:3.40.718.10|MF_00019|PF02504|PIRSF002465|PTHR30100|PTHR30100:SF1|SSF53659|TIGR00182 B2904_RS08970 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR013747|IPR013751|IPR016039 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III|3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal|Thiolase-like GO:0003824|GO:0004315|GO:0006633|GO:0008152 G3DSA:3.40.47.10|PF08541|PF08545|PTHR34069|PTHR34069:SF2|SSF53901 B2904_RS08975 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR009051|IPR010208|IPR011538|IPR017896|IPR017900|IPR019554|IPR026902 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Alpha-helical ferredoxin|Electron transport complex, subunit RnfC/RsxC|NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain|RnfC Barrel sandwich hybrid domain|Soluble ligand binding domain GO:0009055|GO:0016020|GO:0051536|GO:0051539 G3DSA:1.10.1060.10|MF_00461|PF01512|PF10531|PF13183|PF13375|PS00198|PTHR11780|PTHR11780:SF1|SSF142019|SSF46548|TIGR01945 B2904_RS08980 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004338|IPR011303 Electron transport complex, subunit RnfD/RsxD|NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020|GO:0016021|GO:0022900 MF_00462|PF03116|PTHR30578|TIGR01946 B2904_RS08985 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007329|IPR010209 Electron transport complex, subunit RnfG/RsxG|FMN-binding GO:0005886|GO:0009055|GO:0010181|GO:0016020|GO:0022900 MF_00479|PF04205|PIRSF006091|PTHR36118|PTHR36118:SF1|SM00900 B2904_RS08995 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002110|IPR020683 Ankyrin repeat|Ankyrin repeat-containing domain GO:0005515 G3DSA:1.25.40.20|PF12796|PTHR24123|SM00248|SSF48403 B2904_RS09000 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002110|IPR020683 Ankyrin repeat|Ankyrin repeat-containing domain GO:0005515 G3DSA:1.25.40.20|PF00023|PF12796|PF13857|PTHR24198|SM00248|SSF48403 B2904_RS09005 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic G3DSA:2.60.450.10 B2904_RS09015 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001763 Rhodanese-like domain G3DSA:3.40.250.10|PF00581|SSF52821 B2904_RS09020 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 B2904_RS09025 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002150|IPR027491 Ribosomal protein L31|Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00501|PF01197|PR01249|PS01143|PTHR33280|PTHR33280:SF2|SSF143800|TIGR00105 B2904_RS09035 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002099|IPR003594|IPR013507|IPR014721|IPR014762|IPR014790|IPR020568|IPR020667 DNA mismatch repair protein family|DNA mismatch repair protein, C-terminal|DNA mismatch repair protein, MutL|DNA mismatch repair, conserved site|Histidine kinase-like ATPase, C-terminal domain|MutL, C-terminal, dimerisation|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0005524|GO:0006298|GO:0030983 G3DSA:3.30.230.10|G3DSA:3.30.565.10|MF_00149|PF01119|PF08676|PF13589|PS00058|PTHR10073|SM00853|SM01340|SSF118116|SSF54211|SSF55874|TIGR00585 B2904_RS09050 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 MF_01006|PF02673|PTHR30622 B2904_RS09055 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF12844|SM00530|SSF47413 B2904_RS09060 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13174|PF13181|PTHR23083|SM00028|SSF48452 B2904_RS09065 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SSF48452 B2904_RS09070 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007163 Protein of unknown function DUF368 PF04018|PTHR37308 B2904_RS09075 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006056|IPR006175|IPR013813|IPR019897 Endoribonuclease L-PSP/chorismate mutase-like|RidA family|RidA, conserved site|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|PS01094|PTHR11803|PTHR11803:SF13|SSF55298|TIGR00004 B2904_RS09085 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000842|IPR005946|IPR029057|IPR029099 Phosphoribosyl pyrophosphate synthetase, conserved site|Phosphoribosyltransferase-like|Ribose-phosphate diphosphokinase|Ribose-phosphate pyrophosphokinase, N-terminal domain GO:0000287|GO:0004749|GO:0009156|GO:0009165|GO:0044249 G3DSA:3.40.50.2020|MF_00583_B|PF13793|PF14572|PS00114|PTHR10210|PTHR10210:SF41|SM01400|SSF53271|TIGR01251 B2904_RS09090 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001021|IPR011035|IPR020056|IPR020057|IPR029751 Ribosomal protein L25|Ribosomal protein L25, beta domain|Ribosomal protein L25, long-form|Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain|Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain GO:0003735|GO:0005840|GO:0006412|GO:0008097 G3DSA:2.170.120.20|G3DSA:2.40.240.10|MF_01334|PD012503|PF01386|PF14693|PTHR33284|SSF50715|TIGR00731 B2904_RS09095 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001328|IPR018171 Peptidyl-tRNA hydrolase|Peptidyl-tRNA hydrolase, conserved site GO:0004045 G3DSA:3.40.50.1470|MF_00083|PF01195|PS01196|PTHR17224|SSF53178|TIGR00447 B2904_RS09100 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001328|IPR018171 Peptidyl-tRNA hydrolase|Peptidyl-tRNA hydrolase, conserved site GO:0004045 G3DSA:3.40.50.1470|MF_00083|PF01195|PS01196|PTHR17224|SSF53178|TIGR00447 B2904_RS09105 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007138|IPR011008 Antibiotic biosynthesis monooxygenase domain|Dimeric alpha-beta barrel G3DSA:3.30.70.900|PF03992|PTHR33336|PTHR33336:SF3|SSF54909 B2904_RS09110 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001238|IPR003395|IPR027417 DNA-binding, RecF|P-loop containing nucleoside triphosphate hydrolase|RecF/RecN/SMC, N-terminal GO:0003697|GO:0005524|GO:0006281 G3DSA:3.40.50.300|MF_00365|PF02463|PTHR32182|PTHR32182:SF0|SSF52540|TIGR00611 B2904_RS09115 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001127|IPR011055 Duplicated hybrid motif|Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 G3DSA:2.70.70.10|PF00358|PS00371|PTHR30175|PTHR30175:SF1|SSF51261|TIGR00830 B2904_RS09120 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR011006|IPR025662|IPR025943|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PR01590|PS00675|PS00676|PTHR32071|SM00382|SM00448|SSF46689|SSF52172|SSF52540 B2904_RS09125 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF02518|PR00344|PTHR24423|SM00387|SM00388|SSF47384|SSF55874 B2904_RS09130 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000181|IPR023635 Formylmethionine deformylase|Peptide deformylase GO:0005506|GO:0042586 G3DSA:3.90.45.10|MF_00163|PF01327|PIRSF004749|PR01576|PTHR10458|SSF56420|TIGR00079 B2904_RS09135 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006439|IPR023198|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain|Phosphoglycolate phosphatase, domain 2 GO:0008152|GO:0016787 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|PTHR18901|PTHR18901:SF14|SSF56784|TIGR01549 B2904_RS09140 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PTHR30290|PTHR30290:SF10|SSF53850 B2904_RS09145 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR019079|IPR029052 Capsule synthesis protein, CapA|Metallo-dependent phosphatase-like G3DSA:3.60.21.30|PF09587|PTHR33393|PTHR33393:SF2|SM00854|SSF56300 B2904_RS09150 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011055|IPR016047|IPR018392 Duplicated hybrid motif|LysM domain|Peptidase M23 G3DSA:2.70.70.10|G3DSA:3.10.350.10|PF01476|PF01551|PTHR21666|SM00257|SSF51261 B2904_RS09155 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002104|IPR011010|IPR013762|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PTHR30349|PTHR30349:SF5|SSF56349 B2904_RS09160 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002110|IPR020683 Ankyrin repeat|Ankyrin repeat-containing domain GO:0005515 G3DSA:1.25.40.20|PF00023|PF12796|PTHR24198|SM00248|SSF48403 B2904_RS09190 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000726|IPR023346 Glycoside hydrolase, family 19, catalytic|Lysozyme-like domain GO:0004568|GO:0006032|GO:0016998 G3DSA:1.10.530.10|G3DSA:3.30.20.10|PF00182|PTHR34408|PTHR34408:SF1|SSF53955 B2904_RS09200 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007630|IPR011991|IPR013324 RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 region 4|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|PF04545|SSF88659 B2904_RS09230 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR010090 Phage tail tape measure protein PF10145|TIGR01760 B2904_RS09255 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR010064 Bacteriophage HK97-gp10, putative tail-component TIGR01725 B2904_RS09260 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR008767 Bacteriophage SPP1, head-tail adaptor PF05521 B2904_RS09265 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006450|IPR021146 Phage gp6-like head-tail connector protein|Phage protein of unkonwn function PF05135|TIGR01560 B2904_RS09270 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006444|IPR024455 Phage capsid|Phage major capsid protein, HK97 PF05065|SSF56563|TIGR01554 B2904_RS09275 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006433 Prohead protease PF04586|TIGR01543 B2904_RS09280 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006427|IPR006944 Bacteriophage/Gene transfer agent portal protein|Phage portal protein, HK97 PF04860|TIGR01537 B2904_RS09285 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001091|IPR002052|IPR002941|IPR029063 DNA methylase N-4/N-6|DNA methylase, N-6 adenine-specific, conserved site|Restriction/modification DNA-methylase|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0003677|GO:0006306|GO:0008168|GO:0008170|GO:0032259 G3DSA:3.40.50.150|PF01555|PR00508|PS00092|PTHR13370|PTHR13370:SF8|SSF53335 B2904_RS09290 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006448 Putative phage terminase, small subunit, P27 family PF05119 B2904_RS09295 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005021 Phage terminase PF03354|PTHR41287 B2904_RS09315 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR023114 Elongated TPR repeat-containing domain G3DSA:1.10.150.160 B2904_RS09330 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic SSF161270 B2904_RS09340 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002104|IPR004107|IPR011010|IPR013762|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, SAM-like, N-terminal|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PF02899|PTHR30349|SSF56349 B2904_RS09350 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000424|IPR011344|IPR012340 Nucleic acid-binding, OB-fold|Primosome PriB/single-strand DNA-binding|Single-stranded DNA-binding protein GO:0003697|GO:0006260 G3DSA:2.40.50.140|MF_00984|PF00436|PIRSF002070|PTHR10302|PTHR10302:SF0|SSF50249|TIGR00621 B2904_RS09390 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002711 HNH endonuclease GO:0003676|GO:0004519 PF01844 B2904_RS09410 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002611|IPR003593|IPR025662|IPR027417 AAA+ ATPase domain|IstB-like ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase|Sigma-54 interaction domain, ATP-binding site 1 GO:0005524 G3DSA:3.40.50.300|PF01695|PS00675|SM00382|SSF52540 B2904_RS09425 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002035|IPR002881 Domain of unknown function DUF58|von Willebrand factor, type A G3DSA:3.40.50.410|PF01882|PTHR33608|PTHR33608:SF5|SSF53300 B2904_RS09430 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007202|IPR010207|IPR017896|IPR017900 4Fe-4S domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 G3DSA:3.30.70.20|PF04060|PF13187|PS00198|SSF54862|TIGR01944 B2904_RS09435 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003667|IPR011293 Electron transport complex, subunit RnfA/RsxA|Rnf-Nqr subunit, membrane protein GO:0016020|GO:0022900 MF_00459|PF02508|PIRSF006102|PTHR30335|TIGR01943 B2904_RS09440 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003667|IPR010968 Electron transport complex, RsxE|Rnf-Nqr subunit, membrane protein GO:0016020|GO:0022900 MF_00478|PF02508|PIRSF006102|PTHR30586|TIGR01948 B2904_RS09445 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001048|IPR001057|IPR002478|IPR005715|IPR011529|IPR015947|IPR019797 Aspartate/glutamate/uridylate kinase|Glutamate 5-kinase|Glutamate 5-kinase, conserved site|Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase|Glutamate/acetylglutamate kinase|PUA domain|PUA-like domain GO:0003723|GO:0004349|GO:0005737|GO:0006561 G3DSA:2.30.130.10|G3DSA:3.40.1160.10|MF_00456|PF00696|PF01472|PIRSF000729|PR00474|PS00902|PTHR11063|PTHR11063:SF12|SM00359|SSF53633|SSF88697|TIGR01027 B2904_RS09450 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005046|IPR011889|IPR025406 Bacterial surface protein 26-residue repeat|Domain of unknown function DUF4132|Protein of unknown function DUF285 PF03382|PF13569|TIGR02167 B2904_RS09455 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 PF02686|PTHR15004|PTHR15004:SF0|SSF141000|TIGR00135 B2904_RS09460 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000223|IPR015927|IPR019533|IPR028360 Peptidase S24/S26, beta-ribbon domain|Peptidase S24/S26A/S26B/S26C|Peptidase S26|Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 G3DSA:2.10.109.10|PF10502|PR00727|PTHR12383|SSF51306|TIGR02227 B2904_RS09465 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PF03840 B2904_RS09470 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|PTHR23091|SSF55729 B2904_RS09475 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003593|IPR013765|IPR020584|IPR023400|IPR027417 AAA+ ATPase domain|DNA recombination and repair protein RecA|DNA recombination and repair protein RecA, C-terminal|DNA recombination/repair protein RecA, conserved site|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003697|GO:0005524|GO:0006259|GO:0006281|GO:0008094 G3DSA:3.30.250.10|G3DSA:3.40.50.300|MF_00268|PF00154|PR00142|PS00321|PTHR22942|PTHR22942:SF1|SM00382|SSF52540|SSF54752|TIGR02012 B2904_RS09480 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR021440|IPR029058 Alpha/Beta hydrolase fold|Protein of unknown function DUF3089 G3DSA:3.40.50.1820|PF11288|SSF53474 B2904_RS09485 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|PIRSF006603|PTHR11206|PTHR11206:SF132|TIGR00797 B2904_RS09490 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004089|IPR033479 Double Cache domain 1|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 G3DSA:1.10.287.950|G3DSA:3.30.450.20|PF00015|PF02743|PTHR32089|PTHR32089:SF63|SM00283|SSF58104 B2904_RS09505 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001757|IPR008250|IPR018303|IPR023214|IPR023299|IPR027256 HAD-like domain|P-type ATPase|P-type ATPase, A domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site|P-type ATPase, subfamily IB GO:0000166|GO:0006812|GO:0016021|GO:0019829|GO:0046872 G3DSA:2.70.150.10|G3DSA:3.40.1110.10|G3DSA:3.40.50.1000|PF00122|PF00702|PR00119|PR00943|PS00154|PTHR24093|SSF56784|SSF81653|SSF81665|TIGR01494|TIGR01511|TIGR01525 B2904_RS09510 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR025517 Domain of unknown function DUF4405 PF14358 B2904_RS09515 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 B2904_RS09535 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF07715|SSF56935 B2904_RS09540 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000445|IPR003265|IPR004035|IPR005759|IPR011257|IPR023170 DNA glycosylase|Endonuclease III|Endonuclease III, iron-sulphur binding site|Helix-hairpin-helix motif|Helix-turn-helix, base-excision DNA repair, C-terminal|HhH-GPD domain GO:0003677|GO:0003824|GO:0003906|GO:0006281|GO:0006284 G3DSA:1.10.1670.10|G3DSA:1.10.340.30|MF_00942|PF00633|PF00730|PIRSF001435|PS00764|PTHR10359|SM00478|SSF48150 B2904_RS09550 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000652|IPR013785|IPR020861|IPR022896 Aldolase-type TIM barrel|Triosephosphate isomerase|Triosephosphate isomerase, active site|Triosephosphate isomerase, bacterial/eukaryotic GO:0003824|GO:0004807|GO:0006096|GO:0008152 G3DSA:3.20.20.70|MF_00147_B|PF00121|PS00171|PTHR21139|SSF51351|TIGR00419 B2904_RS09555 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|PF00857|PTHR14119|SSF52499 B2904_RS09560 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006714 Flagellar filament outer layer protein FlaA GO:0030288|GO:0071973 PF04620 B2904_RS09565 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003494|IPR020823 Cell division protein FtsA|SHS2 domain inserted in FtsA GO:0005515|GO:0007049 G3DSA:3.30.420.40|G3DSA:3.90.640.10|MF_02033|PF02491|PF14450|PIRSF003101|PTHR32432|PTHR32432:SF4|SM00842|SSF53067|TIGR01174 B2904_RS09580 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|SSF52540 B2904_RS09590 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 G3DSA:3.40.50.2000|PF01075|PTHR30160|PTHR30160:SF7|SSF53756 B2904_RS09595 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR012336 Thioredoxin-like fold G3DSA:3.40.30.10|SSF52833 B2904_RS09600 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13673|SSF55729 B2904_RS09605 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001602 Uncharacterised protein family UPF0047 G3DSA:2.60.120.460|PF01894|PIRSF004681|PTHR30615|SSF111038|TIGR00149 B2904_RS09615 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003390|IPR014046 DNA integrity scanning protein, DisA, N-terminal|Diadenylate cyclase-like G3DSA:3.40.1700.10|PF02457|PIRSF004793|PTHR34185|PTHR34185:SF1|SSF143597|TIGR00159 B2904_RS09620 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR012505 YbbR-like PF07949 B2904_RS09625 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR024045 NusG, domain 2 G3DSA:2.60.320.10|PF07009 B2904_RS09630 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR010898|IPR014535 Heptaprenyl diphosphate synthase component I|Predicted heptaprenyl diphosphate synthase, component I PF07456|PIRSF027391|PTHR41780|PTHR41780:SF1 B2904_RS09635 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR008183|IPR011013|IPR014718|IPR015443 Aldose 1-/Glucose-6-phosphate 1-epimerase|Aldose 1-epimerase|Galactose mutarotase-like domain|Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0016853|GO:0019318|GO:0030246 G3DSA:2.70.98.10|PF01263|PIRSF005096|PTHR10091|PTHR10091:SF0|SSF74650 B2904_RS09640 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002052|IPR012327|IPR029063 D12 class N6 adenine-specific DNA methyltransferase|DNA methylase, N-6 adenine-specific, conserved site|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0008168|GO:0009007|GO:0032259|GO:0032775 G3DSA:3.40.50.150|PF02086|PR00505|PS00092|SSF53335 B2904_RS09645 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003828|IPR014729 Protein of unknown function DUF208|Rossmann-like alpha/beta/alpha sandwich fold G3DSA:3.40.50.620|PF02677|PTHR36701 B2904_RS09655 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004770|IPR018461 Na+/H+ antiporter NhaC|Na+/H+ antiporter, NhaC-like, C-terminal GO:0015297|GO:0016021 PF03553|PTHR33451|PTHR33451:SF3|TIGR00931 B2904_RS09660 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002110|IPR020683 Ankyrin repeat|Ankyrin repeat-containing domain GO:0005515 G3DSA:1.25.40.20|PF12796|PF13606|PR01415|PTHR24198|SM00248|SSF48403 B2904_RS09665 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 PF02028|PTHR30047|PTHR30047:SF2|TIGR00842 B2904_RS09670 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family GO:0050485|GO:0055114 TIGR01918 B2904_RS09675 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family GO:0050485|GO:0055114 PF07355|TIGR01918 B2904_RS09680 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta GO:0050485|GO:0055114 PF09338 B2904_RS09685 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006121|IPR017969 Heavy metal-associated domain, HMA|Heavy-metal-associated, conserved site GO:0030001|GO:0046872 G3DSA:3.30.70.100|PF00403|PS01047|SSF55008 B2904_RS09690 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000085|IPR003583|IPR010994|IPR011114|IPR012340|IPR013849 Bacterial DNA recombination protein RuvA|DNA helicase, Holliday junction RuvA type, domain I, bacterial|DNA helicase, Holliday junction RuvA type, domain III, C-terminal|Helix-hairpin-helix DNA-binding motif, class 1|Nucleic acid-binding, OB-fold|RuvA domain 2-like GO:0003677|GO:0003678|GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 G3DSA:1.10.150.20|G3DSA:1.10.8.10|G3DSA:2.40.50.140|MF_00031|PF01330|PF07499|PF14520|PTHR33796|SM00278|SSF46929|SSF47781|SSF50249|TIGR00084 B2904_RS09710 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003607|IPR006674|IPR026875 HD domain|HD/PDEase domain|Phosphohydrolase-associated domain G3DSA:1.10.3210.10|PF01966|PF13286|PTHR11373|PTHR11373:SF25|SM00471|SSF109604 B2904_RS09720 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002178|IPR003743|IPR016152 C4-type zinc ribbon domain|PTS EIIA type-2 domain|Phosphotransferase/anion transporter GO:0005215|GO:0006810 G3DSA:3.40.930.10|PF00359|PF02591|PS00372|PTHR30505|SSF55804 B2904_RS09725 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000640|IPR000795|IPR004161|IPR005225|IPR005517|IPR009000|IPR009022|IPR014721|IPR020568|IPR027417 Elongation factor G, III-V domain|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Small GTP-binding protein domain|Transcription factor, GTP-binding domain|Translation elongation factor EFG, V domain|Translation elongation factor EFG/EF2, domain IV|Translation elongation factor EFTu/EF1A, domain 2|Translation protein, beta-barrel domain GO:0003924|GO:0005525 G3DSA:2.40.30.10|G3DSA:3.30.230.10|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|PF00009|PF00679|PF03144|PF03764|PF14492|PR00315|PTHR23115|PTHR23115:SF98|SM00838|SM00889|SSF50447|SSF52540|SSF54211|SSF54980|TIGR00231 B2904_RS09735 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001952|IPR017849|IPR017850 Alkaline phosphatase|Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152|GO:0016791 G3DSA:3.40.720.10|PF00245|PR00113|PTHR11596|PTHR11596:SF51|SM00098|SSF53649 B2904_RS09740 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 B2904_RS09760 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000551|IPR009061 MerR-type HTH domain|Putative DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.1660.10|PF13411|SSF46955 B2904_RS09765 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002625 Smr domain SSF160443 B2904_RS09780 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR025665 Outer membrane protein beta-barrel domain PF13568 B2904_RS09785 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002110|IPR020683 Ankyrin repeat|Ankyrin repeat-containing domain GO:0005515 G3DSA:1.25.40.20|PF12796|PR01415|PTHR24123|SM00248|SSF48403 B2904_RS09790 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|PTHR11935|SM00849|SSF56281 B2904_RS09795 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000835|IPR011991|IPR023187 MarR-type HTH domain|Transcriptional regulator MarR-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PR00598|PS01117|PTHR33164|PTHR33164:SF16|SM00347|SSF46785 B2904_RS09800 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR009050|IPR012292 Globin-like|Globin/Protoglobin GO:0019825|GO:0020037 G3DSA:1.10.490.10|SSF46458 B2904_RS09805 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006108|IPR006176|IPR006180|IPR008927|IPR013328|IPR016040|IPR022694 3-hydroxyacyl-CoA dehydrogenase|3-hydroxyacyl-CoA dehydrogenase, C-terminal|3-hydroxyacyl-CoA dehydrogenase, NAD binding|3-hydroxyacyl-CoA dehydrogenase, conserved site|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0003857|GO:0006631|GO:0016491|GO:0055114|GO:0070403 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF00725|PF02737|PIRSF000105|PS00067|PTHR23309|SSF48179|SSF51735 B2904_RS09810 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001753|IPR018376|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily|Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|PS00166|PTHR11941|PTHR11941:SF54|SSF52096 B2904_RS09815 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002155|IPR016039|IPR020610|IPR020613|IPR020615|IPR020616|IPR020617 Thiolase|Thiolase, C-terminal|Thiolase, N-terminal|Thiolase, active site|Thiolase, acyl-enzyme intermediate active site|Thiolase, conserved site|Thiolase-like GO:0003824|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00108|PF02803|PIRSF000429|PS00098|PS00099|PS00737|PTHR18919|PTHR18919:SF95|SSF53901|TIGR01930 B2904_RS09820 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR029787 Nucleotide cyclase SSF55073 B2904_RS09825 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR017896|IPR017900|IPR026816|IPR029039 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Flavodoxin domain|Flavoprotein-like domain G3DSA:3.30.70.20|G3DSA:3.40.50.360|PF12724|PF13237|PS00198|PTHR24960|PTHR24960:SF20|SSF52218|SSF54862 B2904_RS09830 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003702|IPR023990|IPR026888 Acetyl-CoA hydrolase/transferase|Acetyl-CoA hydrolase/transferase C-terminal domain|Butyryl-CoA:acetate CoA-transferase GO:0003824|GO:0006084 G3DSA:3.40.1080.10|G3DSA:3.40.810.20|PF02550|PF13336|PTHR21432|PTHR21432:SF18|SSF100950|TIGR03948 B2904_RS09840 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004039|IPR014731|IPR024935|IPR029035 DHS-like NAD/FAD-binding domain|Electron transfer flavoprotein, alpha subunit, C-terminal|Rubredoxin domain|Rubredoxin-type fold GO:0005506 G3DSA:2.20.28.10|G3DSA:3.40.50.1220|PF00301|PF00766|PR00163|PTHR10909|PTHR10909:SF309|SSF52467|SSF57802 B2904_RS09845 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001226|IPR001279|IPR016440|IPR029039 Flavodoxin, conserved site|Flavoprotein-like domain|Metallo-beta-lactamase|Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 G3DSA:3.40.50.360|G3DSA:3.60.15.10|PF00753|PIRSF005243|PS00201|PTHR32145|PTHR32145:SF20|SM00849|SSF52218|SSF56281 B2904_RS09860 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR025877|IPR027417|IPR029044 MobA-like NTP transferase|Nucleotide-diphospho-sugar transferases|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|G3DSA:3.90.550.10|PF12804|PTHR19136|PTHR19136:SF78|SSF53448 B2904_RS09865 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006042|IPR006043 Xanthine/uracil permease|Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PF00860|PTHR11119|TIGR00801 B2904_RS09875 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001041|IPR002888|IPR006058|IPR012675 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|[2Fe-2S]-binding GO:0009055|GO:0016491|GO:0046872|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.150.120|G3DSA:3.10.20.30|PF00111|PF01799|PS00197|PTHR11908|PTHR11908:SF66|SSF47741|SSF54292 B2904_RS09880 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000674|IPR008274 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF01315|PF02738|PTHR11908|SM01008|SSF54665|SSF56003 B2904_RS09885 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001048|IPR003964 Aspartate/glutamate/uridylate kinase|Carbamate kinase GO:0006525|GO:0008804 G3DSA:3.40.1160.10|PF00696|PIRSF000723|PR01469|PTHR30409|PTHR30409:SF1|SSF53633|TIGR00746 B2904_RS09890 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002082|IPR006130|IPR006131|IPR006132|IPR017702 Aspartate carbamoyltransferase|Aspartate/ornithine carbamoyltransferase|Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain|Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding|Putative carbamoyltransferase YgeW GO:0004070|GO:0006207|GO:0006520|GO:0016597|GO:0016743 G3DSA:3.40.50.1370|PF00185|PF02729|PR00100|PR00101|PTHR11405|PTHR11405:SF40|SSF53671|TIGR03316 B2904_RS09895 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001261|IPR002933|IPR011650|IPR017706 ArgE/DapE/ACY1/CPG2/YscS, conserved site|Peptidase M20|Peptidase M20, dimerisation domain|Peptidase M20/DapE, YgeY GO:0006508|GO:0008152|GO:0008237|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PS00758|PTHR11014|PTHR11014:SF116|SSF53187|SSF55031|TIGR03526 B2904_RS09900 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001926|IPR010081|IPR019871 Diaminopropionate ammonia-lyase|Diaminopropionate ammonia-lyase, subgroup|Tryptophan synthase beta subunit-like PLP-dependent enzyme GO:0008838|GO:0030170 G3DSA:3.40.50.1100|PF00291|PTHR10314|PTHR10314:SF127|SSF53686|TIGR01747|TIGR03528 B2904_RS09905 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR013559 YheO-like PD037769|PF08348|PF13309|PTHR35568 B2904_RS09910 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006680|IPR011059|IPR017700|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain|Putative selenium metabolism protein SsnA GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|PTHR11271|PTHR11271:SF40|SSF51338|SSF51556|TIGR03314 B2904_RS09920 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000674|IPR001041|IPR002888|IPR006058|IPR008274|IPR012675|IPR017697 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding|Beta-grasp domain|Selenium-dependent xanthine dehydrogenase|[2Fe-2S]-binding GO:0009055|GO:0016491|GO:0046872|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.150.120|G3DSA:3.10.20.30|G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF00111|PF01315|PF01799|PF02738|PS00197|PTHR11908|PTHR11908:SF91|SM01008|SSF47741|SSF54292|SSF54665|SSF56003|TIGR03311 B2904_RS09930 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002110|IPR020683 Ankyrin repeat|Ankyrin repeat-containing domain GO:0005515 G3DSA:1.25.40.20|PF12796|PF13606|PF13637|PF13857|PR01415|PTHR24123|SM00248|SSF48403 B2904_RS09935 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006680|IPR011059|IPR011778|IPR032466 Amidohydrolase-related|Hydantoinase/dihydropyrimidinase|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0005737|GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|PTHR11647|PTHR11647:SF1|SSF51338|SSF51556|TIGR02033 B2904_RS09950 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000192|IPR010969|IPR015421|IPR015422|IPR015424|IPR016454|IPR020578 Aminotransferase class V domain|Aminotransferase class-V, pyridoxal-phosphate binding site|Cysteine desulfurase|Cysteine desulfurase-related, unknown function|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|PIRSF005572|PS00595|PTHR11601|PTHR11601:SF43|SSF53383|TIGR01977 B2904_RS09955 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR010327 FldB/FldC dehydratase alpha/beta subunit PF06050|PTHR30548|PTHR30548:SF6 B2904_RS09960 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003251|IPR004039|IPR009078|IPR012347 Ferritin-like superfamily|Ferritin-related|Rubredoxin-type fold|Rubrerythrin GO:0016491|GO:0046872|GO:0055114 G3DSA:1.20.1260.10|G3DSA:2.20.28.10|PF02915|PTHR33746|PTHR33746:SF3|SSF47240|SSF57802 B2904_RS09970 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR024445 ISXO2-like transposase domain PF12762|SM01126 B2904_RS09990 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR22916|SSF53448 B2904_RS09995 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007829|IPR018770 5-bromo-4-chloroindolyl phosphate hydrolysis protein|TM2 domain PF05154|PF10112 B2904_RS10000 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007156|IPR023353 LemA|LemA-like domain G3DSA:1.20.1440.20|PF04011|SSF140478 B2904_RS10005 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR021136 Flagellar hook-length control protein-like, C-terminal PF02120 B2904_RS10010 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005648 Flagellar hook capping protein PF03963|PTHR30435|PTHR30435:SF15 B2904_RS10015 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005639 Delta endotoxin, N-terminal GO:0009405 G3DSA:1.20.190.10 B2904_RS10020 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011989|IPR016024 Armadillo-like helical|Armadillo-type fold GO:0005488 G3DSA:1.25.10.10|SSF48371 B2904_RS10025 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006665 OmpA-like domain G3DSA:3.30.1330.60|PF00691|SSF103088 B2904_RS10030 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006664|IPR006665 OmpA-like domain|Outer membrane protein, bacterial GO:0009279|GO:0016021 G3DSA:3.30.1330.60|PF00691|PR01021|SSF103088 B2904_RS10040 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007197|IPR013785|IPR016431 Aldolase-type TIM barrel|Pyruvate-formate lyase-activating enzyme, predicted|Radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|PF04055|PIRSF004869|PTHR30352|PTHR30352:SF7|SSF102114 B2904_RS10045 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003170|IPR006094|IPR011601|IPR016166|IPR016167|IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|UDP-N-acetylenolpyruvoylglucosamine reductase|UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0003824|GO:0008762|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.30.43.10|G3DSA:3.30.465.10|G3DSA:3.90.78.10|MF_00037|PF01565|PF02873|PTHR21071|PTHR21071:SF4|SSF56176|SSF56194|TIGR00179 B2904_RS10050 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002085|IPR002328|IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|Alcohol dehydrogenase, zinc-type, conserved site|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PS00059|PTHR11695|PTHR11695:SF261|SM00829|SSF50129|SSF51735 B2904_RS10055 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003141|IPR004013|IPR010140|IPR016195 Histidinol phosphate phosphatase, HisJ|PHP domain|Polymerase/histidinol phosphatase, N-terminal|Polymerase/histidinol phosphatase-like GO:0000105|GO:0003677|GO:0003824|GO:0003887|GO:0004401|GO:0006260 G3DSA:3.20.20.140|PF02811|PTHR21039|SM00481|SSF89550|TIGR01856 B2904_RS10085 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|PTHR22911|PTHR22911:SF27|SSF103481 B2904_RS10090 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 G3DSA:3.90.960.10|PF04073|PTHR30411|PTHR30411:SF6|SSF55826 B2904_RS10095 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR021533 Putative beta-lactamase-inhibitor-like, PepSY-like PF11396|SSF160574 B2904_RS10100 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001444|IPR010930|IPR011491|IPR019776|IPR020013 Fagellar hook-basal body protein, FlgE/F/G|Flagellar basal body rod protein, N-terminal|Flagellar basal body rod protein, conserved site|Flagellar basal-body/hook protein, C-terminal domain|Flagellar hook protein FlgE GO:0071973 PF00460|PF06429|PF07559|PS00588|PTHR30435|PTHR30435:SF1|SSF117143|TIGR03506 B2904_RS10105 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR009384 Flagellar PF06289 B2904_RS10110 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002898|IPR022522 Flagellar motor stator, MotA|MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PF01618|PTHR30433|PTHR30433:SF2 B2904_RS10115 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006665|IPR025713 Motility protein B, N-terminal domain|OmpA-like domain G3DSA:3.30.1330.60|PF00691|PF13677|PTHR30329|PTHR30329:SF4|SSF103088 B2904_RS10120 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR019614|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|S-adenosylmethionine-dependent methyltransferase GO:0008168 G3DSA:3.40.50.150|PF10672|PTHR11061|PTHR11061:SF33|SSF53335 B2904_RS10125 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001054|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|Nucleotide cyclase GO:0009190|GO:0016849|GO:0035556 G3DSA:3.30.70.1230|SSF55073 B2904_RS10130 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR027304 Trigger factor/SurA domain PF13624|SSF109998 B2904_RS10135 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000178|IPR005225|IPR006847|IPR009000|IPR023115|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Translation initiation factor IF- 2, domain 3|Translation initiation factor IF-2, N-terminal|Translation initiation factor aIF-2, bacterial-like|Translation protein, beta-barrel domain GO:0003743|GO:0005525|GO:0005622|GO:0006413 G3DSA:2.40.30.10|G3DSA:3.40.50.10050|G3DSA:3.40.50.300|MF_00100_B|PF00009|PF04760|PF11987|PS01176|PTHR23115|PTHR23115:SF184|SSF50447|SSF52156|SSF52540|TIGR00231|TIGR00487 B2904_RS10145 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 PF02684|PTHR30372|SSF53756|TIGR00215 B2904_RS10150 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001451|IPR010137|IPR011004|IPR029098 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase|Hexapeptide repeat|Trimeric LpxA-like|Udp N-acetylglucosamine O-acyltransferase, C-terminal GO:0008610|GO:0008780 G3DSA:1.20.1180.10|G3DSA:2.160.10.10|PF00132|PF13720|PIRSF000456|PTHR23416|PTHR23416:SF8|SSF51161|TIGR01852 B2904_RS10155 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR010084|IPR013114|IPR029069 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ|Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ|HotDog domain GO:0005737|GO:0006633|GO:0016836 G3DSA:3.10.129.10|MF_00406|PF07977|PTHR30272|SSF54637|TIGR01750 B2904_RS10160 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007160|IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Domain of unknown function DUF362 G3DSA:3.30.70.20|PF04015|PF13237|PS00198|PTHR24960|PTHR24960:SF25|SSF54862 B2904_RS10170 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 G3DSA:3.90.470.20|PF01648|PTHR12215|PTHR12215:SF10|SSF56214 B2904_RS10175 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR008863 Toxic anion resistance PF05816|PIRSF026508|PTHR38432|PTHR38432:SF1 B2904_RS10180 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR018770 5-bromo-4-chloroindolyl phosphate hydrolysis protein PF10112 B2904_RS10185 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13489|PTHR10108|PTHR10108:SF739|SSF53335 B2904_RS10190 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 B2904_RS10200 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006714 Flagellar filament outer layer protein FlaA GO:0030288|GO:0071973 PF04620 B2904_RS10205 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006714 Flagellar filament outer layer protein FlaA GO:0030288|GO:0071973 PF04620 B2904_RS10210 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000748|IPR002942|IPR006145|IPR018496|IPR020103 Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, RsuA/RluB/E/F|Pseudouridine synthase, RsuA/RluB/E/F, conserved site|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain GO:0001522|GO:0003723|GO:0009451|GO:0009982|GO:0016866 G3DSA:3.10.290.10|PF00849|PF01479|PS01149|PTHR21600|PTHR21600:SF24|SM00363|SSF55120|SSF55174|TIGR00093 B2904_RS10215 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003660|IPR004089 HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|G3DSA:3.30.450.20|PF00015|PF00672|PTHR32089|SM00283|SM00304|SSF58104 B2904_RS10220 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 G3DSA:1.20.1090.10|G3DSA:3.40.50.1970|PF00465|PTHR11496|PTHR11496:SF69|SSF56796 B2904_RS10225 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR010364 Uncharacterised protein family, inner membrane CreD PF06123|PIRSF004548|PTHR30092 B2904_RS10230 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR024445 ISXO2-like transposase domain PF12762|SM01126 B2904_RS10240 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|PIRSF006603|PTHR11206|PTHR11206:SF132|TIGR00797 B2904_RS10250 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|PIRSF006603|PTHR11206|PTHR11206:SF132|TIGR00797 B2904_RS10260 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002684|IPR006638|IPR007197|IPR010722|IPR013785|IPR024177 Aldolase-type TIM barrel|Biotin and thiamin synthesis-associated domain|Biotin synthase|Biotin synthase/Biotin biosynthesis bifunctional protein BioAB|Elongator protein 3/MiaB/NifB|Radical SAM GO:0003824|GO:0004076|GO:0009102|GO:0051536 G3DSA:3.20.20.70|MF_01694|PF04055|PF06968|PIRSF001619|PTHR22976|PTHR22976:SF1|SM00729|SM00876|SSF102114|TIGR00433 B2904_RS10265 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004472|IPR027417 Dethiobiotin synthase BioD|P-loop containing nucleoside triphosphate hydrolase GO:0000287|GO:0004141|GO:0005524|GO:0009102 G3DSA:3.40.50.300|MF_00336|PF13500|PIRSF006755|PTHR21343|PTHR21343:SF0|SSF52540|TIGR00347 B2904_RS10270 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005814|IPR005815|IPR015421|IPR015422|IPR015424 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA|Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0004015|GO:0008483|GO:0009102|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00202|PIRSF000521|PTHR11986|PTHR11986:SF8|SSF53383|TIGR00508 B2904_RS10275 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PTHR30290|PTHR30290:SF10|SSF53850 B2904_RS10280 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007076 TfoX, N-terminal G3DSA:3.30.1460.30|PF04993|SSF159894 B2904_RS10285 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002314|IPR002317|IPR010978|IPR015866 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Serine-tRNA ligase, type1|Serine-tRNA synthetase, type1, N-terminal|tRNA-binding arm GO:0000166|GO:0004812|GO:0004828|GO:0005524|GO:0005737|GO:0006418|GO:0006434 G3DSA:1.10.287.40|G3DSA:3.30.930.10|MF_00176|PF00587|PF02403|PIRSF001529|PR00981|PTHR11778|PTHR11778:SF0|SSF46589|SSF55681|TIGR00414 B2904_RS10290 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003251|IPR004039|IPR009078|IPR012347 Ferritin-like superfamily|Ferritin-related|Rubredoxin-type fold|Rubrerythrin GO:0016491|GO:0046872|GO:0055114 G3DSA:1.20.1260.10|G3DSA:2.20.28.10|PF02915|PTHR33746|PTHR33746:SF1|SSF47240|SSF57802 B2904_RS10295 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000425|IPR022357|IPR023271 Aquaporin-like|Major intrinsic protein|Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 G3DSA:1.20.1080.10|PF00230|PR00783|PS00221|PTHR19139|PTHR19139:SF100|SSF81338|TIGR00861 B2904_RS10300 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000577|IPR005999|IPR018483|IPR018484|IPR018485 Carbohydrate kinase, FGGY|Carbohydrate kinase, FGGY, C-terminal|Carbohydrate kinase, FGGY, N-terminal|Carbohydrate kinase, FGGY, conserved site|Glycerol kinase GO:0004370|GO:0005975|GO:0006072|GO:0016773 G3DSA:3.30.420.40|MF_00186|PF00370|PF02782|PIRSF000538|PS00933|PTHR10196|PTHR10196:SF9|SSF53067|TIGR01311 B2904_RS10305 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006076|IPR007419|IPR023753 BFD-like [2Fe-2S]-binding domain|FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01266|PF04324|PTHR13847|PTHR13847:SF150|SSF51905 B2904_RS10310 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000103|IPR023753 FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF07992|PR00368|PR00469|PTHR22912|PTHR22912:SF141|SSF51905 B2904_RS10315 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006035|IPR023696 Ureohydrolase|Ureohydrolase domain GO:0046872 G3DSA:3.40.800.10|PF00491|PR00116|PTHR11358|SSF52768 B2904_RS10320 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR012460 Protein of unknown function DUF1667 G3DSA:3.10.530.10|PF07892|PTHR39450|SSF160148 B2904_RS10325 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002646|IPR032810|IPR032828 CCA-adding enzyme, C-terminal|Poly A polymerase, head domain|tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain GO:0003723|GO:0006396|GO:0016779 G3DSA:1.10.3090.10|G3DSA:3.30.460.10|PF01743|PF12627|PF13735|PTHR13734|PTHR13734:SF5|SSF81301|SSF81891 B2904_RS10330 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004619 Type III pantothenate kinase GO:0004594 G3DSA:3.30.420.40|MF_01274|PF03309|PTHR34265|SSF53067|TIGR00671 B2904_RS10335 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000032|IPR001020 Phosphocarrier HPr protein-like|Phosphotransferase system, HPr histidine phosphorylation site G3DSA:3.30.1340.10|PF00381|PR00107|PS00369|PTHR33705|PTHR33705:SF1|SSF55594|TIGR01003 B2904_RS10340 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000121|IPR006318|IPR008279|IPR008731|IPR015813|IPR018274|IPR023151|IPR024692 PEP-utilising enzyme, C-terminal|PEP-utilising enzyme, active site|PEP-utilising enzyme, conserved site|PEP-utilising enzyme, mobile domain|Phosphotransferase system, enzyme I|Phosphotransferase system, enzyme I N-terminal|Phosphotransferase system, enzyme I-like|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0008965|GO:0009401|GO:0016310|GO:0016772 G3DSA:1.10.274.10|G3DSA:3.20.20.60|G3DSA:3.50.30.10|PF00391|PF02896|PF05524|PIRSF000732|PR01736|PS00370|PS00742|PTHR22931|PTHR22931:SF28|SSF47831|SSF51621|SSF52009|TIGR01417 B2904_RS10350 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR017896|IPR017900|IPR029039 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Flavoprotein-like domain G3DSA:3.30.70.20|G3DSA:3.40.50.360|PF00037|PS00198|SSF52218|SSF54862 B2904_RS10355 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000914|IPR023765|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain|Solute-binding protein family 5, conserved site GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PS01040|PTHR30290|PTHR30290:SF10|SSF53850 B2904_RS10360 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000836|IPR005764|IPR029057 Adenine phosphoribosyl transferase|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0003999|GO:0005737|GO:0006168|GO:0009116 G3DSA:3.40.50.2020|MF_00004|PF00156|PTHR32315|SSF53271|TIGR01090 B2904_RS10370 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13175|SSF52540 B2904_RS10375 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 B2904_RS10380 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007421|IPR029684 Schlafen family|Schlafen, AAA domain GO:0005524 PF04326|PTHR12155 B2904_RS10385 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000103|IPR005982|IPR008255|IPR023753 FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, class-II|Pyridine nucleotide-disulphide oxidoreductase, class-II, active site|Thioredoxin reductase GO:0004791|GO:0005737|GO:0016491|GO:0019430|GO:0055114 G3DSA:3.50.50.60|PF07992|PR00368|PR00469|PS00573|PTHR22912|PTHR22912:SF48|SSF51905|TIGR01292 B2904_RS10390 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003728|IPR028989 Ribosome maturation factor RimP|Ribosome maturation factor RimP, N-terminal GO:0042274 G3DSA:3.30.300.70|PF02576|SSF75420 B2904_RS10395 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003029|IPR009019|IPR010213|IPR010995|IPR012340|IPR013735|IPR015946|IPR022967|IPR025249|IPR030842 DNA repair Rad51/transcription factor NusA, alpha-helical|K homology domain, prokaryotic type|K homology domain-like, alpha/beta|KH domain, NusA-like|Nucleic acid-binding, OB-fold|RNA-binding domain, S1|S1 domain|Transcription factor NusA, N-terminal|Transcription termination factor NusA|Transcription termination/antitermination protein NusA, bacterial GO:0000166|GO:0003676|GO:0003700|GO:0003723|GO:0006353|GO:0031554|GO:0031564 G3DSA:1.10.150.20|G3DSA:2.40.50.140|G3DSA:3.30.1480.10|G3DSA:3.30.300.20|MF_00945_B|PF00575|PF08529|PF13184|PF13248|PTHR22648|PTHR22648:SF0|SM00316|SSF47794|SSF50249|SSF54814|SSF69705|TIGR01953 B2904_RS10400 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13489|SSF53335 B2904_RS10405 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF12705|SSF52540 B2904_RS10410 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 G3DSA:2.40.10.240|G3DSA:3.40.1780.10|MF_00113|PF02547|PTHR30307|PTHR30307:SF0|SSF111337|TIGR00113 B2904_RS10420 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000223|IPR015927|IPR019758|IPR019759|IPR028360 Peptidase S24/S26, beta-ribbon domain|Peptidase S24/S26A/S26B|Peptidase S24/S26A/S26B/S26C|Peptidase S26A, signal peptidase I|Peptidase S26A, signal peptidase I, conserved site GO:0006508|GO:0008236|GO:0016020|GO:0016021 G3DSA:2.10.109.10|PF00717|PR00727|PS00761|PTHR12383|PTHR12383:SF14|SSF51306|TIGR02227 B2904_RS10425 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 B2904_RS10430 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR012336 Thioredoxin-like fold PF01257|SSF52833 B2904_RS10435 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011538|IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain|NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 PF01512|PF10589|PTHR11780|PTHR11780:SF0|SSF140490|SSF142019 B2904_RS10440 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001041|IPR012675 2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain GO:0009055|GO:0051536 G3DSA:3.10.20.30|G3DSA:3.30.70.20|PF13510|SSF53706|SSF54292|SSF54862 B2904_RS10445 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000447|IPR006076|IPR023753|IPR031656 Alpha-glycerophosphate oxidase, C-terminal|FAD dependent oxidoreductase|FAD-dependent glycerol-3-phosphate dehydrogenase|FAD/NAD(P)-binding domain GO:0004368|GO:0006072|GO:0009331|GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01266|PF16901|PR01001|PTHR11985|PTHR11985:SF1|SSF51905 B2904_RS10450 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR021533 Putative beta-lactamase-inhibitor-like, PepSY-like PF11396|SSF160574 B2904_RS10455 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000559|IPR020628|IPR027417 Formate-tetrahydrofolate ligase, FTHFS|Formate-tetrahydrofolate ligase, FTHFS, conserved site|P-loop containing nucleoside triphosphate hydrolase GO:0004329|GO:0005524|GO:0009396 G3DSA:3.10.410.10|G3DSA:3.30.1510.10|G3DSA:3.40.50.300|MF_01543|PF01268|PS00722|PTHR10025|SSF52540 B2904_RS10460 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001667|IPR003156|IPR004610 Bacterial RecJ exonuclease|DDH domain|DHHA1 domain GO:0003676|GO:0006281|GO:0006310|GO:0008409 PF01368|PF02272|PTHR30255|PTHR30255:SF2|SSF64182|TIGR00644 B2904_RS10465 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|PIRSF006603|PTHR11206|PTHR11206:SF107|TIGR00797 B2904_RS10470 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000352|IPR004373|IPR005139|IPR014720 Double-stranded RNA-binding domain|Peptide chain release factor|Peptide chain release factor 1|Peptide chain release factor class I/class II GO:0003747|GO:0005737|GO:0006415|GO:0016149 G3DSA:1.20.58.410|G3DSA:3.30.160.20|MF_00093|PF00472|PF03462|PS00745|PTHR11075|PTHR11075:SF9|SM00937|SSF75620|TIGR00019 B2904_RS10480 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR013785|IPR023885|IPR027608 4Fe4S-binding SPASM domain|Aldolase-type TIM barrel|Spirochetes SPASM protein GO:0003824 G3DSA:3.20.20.70|PF13186|SSF102114|TIGR04321 B2904_RS10490 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001451|IPR005835|IPR029044 Hexapeptide repeat|Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain GO:0009058|GO:0016779 G3DSA:3.90.550.10|PF00132|PF00483|PTHR22572|SSF53448 B2904_RS10495 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002818|IPR006287|IPR029062 Class I glutamine amidotransferase-like|DJ-1|DJ-1/PfpI G3DSA:3.40.50.880|PF01965|PTHR11019|PTHR11019:SF4|SSF52317|TIGR01383 B2904_RS10500 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005790|IPR008921|IPR010372|IPR027417 DNA polymerase III delta, N-terminal|DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|DNA polymerase III, delta subunit|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003887|GO:0006260|GO:0009360 G3DSA:1.10.8.60|PF06144|PTHR34388|SSF48019|SSF52540|TIGR01128 B2904_RS10505 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR014905 HIRAN domain GO:0003676|GO:0008270|GO:0016818 PF08797|SM00910 B2904_RS10525 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|SSF56925 B2904_RS10530 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|SSF56925 B2904_RS10535 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003746 Protein of unknown function DUF167 G3DSA:3.30.1200.10|MF_00634|PF02594|SM01152|SSF69786 B2904_RS10540 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011042 Six-bladed beta-propeller, TolB-like G3DSA:2.120.10.30|SSF82171 B2904_RS10545 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR012312|IPR012827|IPR016131 Haemerythrin, iron-binding site|Haemerythrin, metal-binding domain|Haemerythrin-like GO:0046872 G3DSA:1.20.120.50|PF01814|PS00550|PTHR37164|SSF47188|TIGR02481 B2904_RS10550 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR012312|IPR012827|IPR016131 Haemerythrin, iron-binding site|Haemerythrin, metal-binding domain|Haemerythrin-like GO:0046872 G3DSA:1.20.120.50|PF01814|PS00550|PTHR37164|SSF47188|TIGR02481 B2904_RS10555 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000941|IPR020809|IPR020810|IPR020811|IPR029017|IPR029065 Enolase|Enolase C-terminal domain-like|Enolase N-terminal domain-like|Enolase, C-terminal TIM barrel domain|Enolase, N-terminal|Enolase, conserved site GO:0000015|GO:0000287|GO:0004634|GO:0006096 G3DSA:3.20.20.120|G3DSA:3.30.390.10|MF_00318|PF00113|PF03952|PIRSF001400|PR00148|PS00164|PTHR11902|SM01192|SM01193|SSF51604|SSF54826|TIGR01060 B2904_RS10560 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR10859|PTHR10859:SF95|SSF53448 B2904_RS10570 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001670|IPR012079|IPR015590|IPR016161|IPR016162|IPR016163|IPR018211 Alcohol dehydrogenase, iron-type|Alcohol dehydrogenase, iron-type, conserved site|Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde/histidinol dehydrogenase|Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008152|GO:0008774|GO:0015976|GO:0016491|GO:0016620|GO:0046872|GO:0055114 G3DSA:1.20.1090.10|G3DSA:3.40.309.10|G3DSA:3.40.50.1970|G3DSA:3.40.605.10|PF00171|PF00465|PIRSF000111|PS00060|PTHR11496|PTHR11496:SF79|SSF53720|SSF56796 B2904_RS10575 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 G3DSA:1.20.58.180|G3DSA:3.30.930.10|MF_00254|PF02091|PR01044|PTHR30075|SSF55681|TIGR00388 B2904_RS10585 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|PTHR11271|PTHR11271:SF37|SSF51338|SSF51556 B2904_RS10595 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|PTHR11935|SM00849|SSF56281 B2904_RS10610 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004919|IPR011089 Domain of unknown function DUF1524|Domain of unknown function DUF262 PF03235|PF07510 B2904_RS10615 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 G3DSA:3.40.190.10|PF13343|PIRSF019574|PR00909|PTHR30222|PTHR30222:SF5|SSF53850 B2904_RS10620 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30222|PTHR30222:SF6|SSF161098 B2904_RS10625 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30193|PTHR30193:SF10|SSF161098 B2904_RS10630 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003439|IPR003593|IPR005893|IPR008995|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0005524|GO:0015417|GO:0015846|GO:0016887|GO:0043190 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF150|SM00382|SSF50331|SSF52540|TIGR01187 B2904_RS10635 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR013783 Immunoglobulin-like fold G3DSA:2.60.40.10|SSF117070 B2904_RS10640 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|PIRSF006603|PTHR11206|PTHR11206:SF107|TIGR00797 B2904_RS10650 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 B2904_RS10655 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007380|IPR012312|IPR015077 Domain of unknown function DUF1858|Domain of unknown function DUF438|Haemerythrin-like G3DSA:1.10.3910.10|G3DSA:1.20.120.520|PF01814|PF04282|PF08984|SSF140683 B2904_RS10660 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR025588 YcxB-like protein PF14317 B2904_RS10665 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR008217|IPR009078|IPR012347 Ccc1 family|Ferritin-like superfamily|Ferritin-related G3DSA:1.20.1260.10|PF01988|PTHR31851|PTHR31851:SF1|SSF47240 B2904_RS10670 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002933|IPR011650|IPR017439 Amidohydrolase|Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PIRSF005962|PTHR11014|PTHR11014:SF63|SSF53187|SSF55031|TIGR01891 B2904_RS10675 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR032479 Protein of unknown function DUF5058 PF16481 B2904_RS10690 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001789|IPR001932|IPR011006 CheY-like superfamily|PPM-type phosphatase domain|Signal transduction response regulator, receiver domain GO:0000160|GO:0003824 G3DSA:3.40.50.2300|PF00072|PF07228|PTHR21021|PTHR21021:SF21|SM00331|SM00448|SSF52172|SSF81606 B2904_RS10695 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001182|IPR011923|IPR018365 Cell cycle protein FtsW/RodA|Cell cycle, FtsW / RodA / SpoVE, conserved site|Rod shape-determining protein RodA GO:0007049|GO:0008360|GO:0016021|GO:0051301 PF01098|PS00428|PTHR30474|PTHR30474:SF1 B2904_RS10700 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001460|IPR002137|IPR005311|IPR012338|IPR017790 Beta-lactamase, class-D active site|Beta-lactamase/transpeptidase-like|Penicillin-binding protein 2|Penicillin-binding protein, dimerisation domain|Penicillin-binding protein, transpeptidase GO:0008658|GO:0008800|GO:0016020|GO:0017001 G3DSA:3.40.710.10|G3DSA:3.90.1310.10|PF00905|PF03717|PS00337|PTHR30627|PTHR30627:SF2|SSF56519|SSF56601|TIGR03423 B2904_RS10705 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001478|IPR004447|IPR005151|IPR029045 C-terminal-processing peptidase S41A|ClpP/crotonase-like domain|PDZ domain|Tail specific protease GO:0005515|GO:0006508|GO:0008236 G3DSA:2.30.42.10|G3DSA:3.30.750.44|G3DSA:3.90.226.10|PF00595|PF03572|PTHR32060|SM00228|SM00245|SSF50156|SSF52096|TIGR00225 B2904_RS10710 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 G3DSA:3.40.630.40|PF01520|SSF53187 B2904_RS10715 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000600 ROK family G3DSA:3.30.420.40|PF00480|PS01125|PTHR18964|PTHR18964:SF123|SSF53067 B2904_RS10720 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR10859|SSF53448 B2904_RS10725 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003370 Chromate transporter GO:0015109|GO:0015703 PF02417|PTHR33567 B2904_RS10730 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003370 Chromate transporter GO:0015109|GO:0015703 PF02417|PTHR33567|PTHR33567:SF2 B2904_RS10745 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001891|IPR012301|IPR012302|IPR016040 Malic enzyme, N-terminal domain|Malic enzyme, NAD-binding|Malic oxidoreductase|NAD(P)-binding domain GO:0004470|GO:0004471|GO:0006108|GO:0051287|GO:0055114 G3DSA:3.40.50.10380|G3DSA:3.40.50.720|PF00390|PF03949|PIRSF000106|PTHR23406|SM00919|SM01274|SSF51735|SSF53223 B2904_RS10750 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011544 Restriction endonuclease, type II, Cfr10/BsoB1, core GO:0003677|GO:0009036|GO:0009307 G3DSA:3.40.91.10 B2904_RS10755 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000073|IPR008220|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 G3DSA:3.40.50.1820|MF_00296|PF00561|PIRSF000443|PTHR32268|PTHR32268:SF11|SSF53474|TIGR01392 B2904_RS10760 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000277|IPR006235|IPR015421|IPR015422|IPR015424 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme|O-acetylhomoserine/O-acetylserine sulfhydrylase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0006520|GO:0016765|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01053|PIRSF001434|PS00868|PTHR11808|PTHR11808:SF12|SSF53383|TIGR01326 B2904_RS10775 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002579|IPR011057|IPR028427 Mss4-like|Peptide methionine sulfoxide reductase|Peptide methionine sulphoxide reductase MrsB GO:0006979|GO:0016671|GO:0030091|GO:0033743|GO:0055114 G3DSA:2.170.150.20|PF01641|PTHR10173|PTHR10173:SF18|SSF51316|TIGR00357 B2904_RS10780 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002569|IPR028427 Peptide methionine sulfoxide reductase|Peptide methionine sulphoxide reductase MsrA GO:0006979|GO:0008113|GO:0016671|GO:0030091|GO:0055114 G3DSA:3.30.1060.10|MF_01401|PF01625|PTHR10173|PTHR10173:SF6|SSF55068|TIGR00401 B2904_RS10785 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001851|IPR030158 ABC transporter, permease|Galactoside transport system permease protein MglC GO:0005215|GO:0006810|GO:0008643|GO:0016020|GO:0016021 PF02653|PTHR32196|PTHR32196:SF18 B2904_RS10790 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF303|SM00382|SSF52540 B2904_RS10795 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR025997|IPR028082 Periplasmic binding protein|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13407|PTHR30036|PTHR30036:SF2|SSF53822 B2904_RS10805 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002942|IPR006145|IPR006224|IPR006225|IPR020103 Pseudouridine synthase, RluC/RluD|Pseudouridine synthase, RluC/RluD, conserved site|Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.10.290.10|PF00849|PS01129|PTHR11079|PTHR11079:SF73|SM00363|SSF55120|SSF55174|TIGR00005 B2904_RS10810 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MF_00161|PF01252|PR00781|PS00855|PTHR33695|PTHR33695:SF1|TIGR00077 B2904_RS10815 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001980|IPR004821|IPR014729 Coenzyme A biosynthesis protein|Cytidyltransferase-like domain|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0004595|GO:0009058|GO:0015937 G3DSA:3.40.50.620|MF_00151|PF01467|PR01020|PTHR21342|PTHR21342:SF1|SSF52374|TIGR00125|TIGR01510 B2904_RS10820 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005839|IPR006638|IPR007197|IPR013848|IPR020612|IPR023404|IPR023970 Elongator protein 3/MiaB/NifB|Methylthiotransferase|Methylthiotransferase, N-terminal|Methylthiotransferase, conserved site|Methylthiotransferase/radical SAM-type protein|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0009451|GO:0016740|GO:0043412|GO:0051536|GO:0051539 G3DSA:3.80.30.20|PF00919|PF04055|PS01278|PTHR11918|PTHR11918:SF43|SM00729|SSF102114|TIGR00089|TIGR01574 B2904_RS10825 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001943|IPR025542 UVR domain|YacH protein GO:0005515 PF02151|PIRSF015034|PTHR38430 B2904_RS10830 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR014746|IPR022414 ATP:guanido phosphotransferase, catalytic domain|Glutamine synthetase/guanido kinase, catalytic domain GO:0003824|GO:0016301|GO:0016772 G3DSA:3.30.590.10|PF00217|SSF55931 B2904_RS10835 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR013783 Immunoglobulin-like fold G3DSA:2.60.40.10 B2904_RS10840 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001433|IPR012165|IPR017938|IPR019480 Cytochrome-c3 hydrogenase, gamma subunit|Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain|Oxidoreductase FAD/NAD(P)-binding|Riboflavin synthase-like beta-barrel GO:0006221|GO:0016491|GO:0050660|GO:0051537|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.40.50.80|PF00175|PF10418|PIRSF006816|PTHR11938|PTHR11938:SF47|SSF52343|SSF63380 B2904_RS10845 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001857|IPR008991|IPR018257 Ribosomal protein L19|Ribosomal protein L19, conserved site|Translation protein SH3-like domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00402|PF01245|PIRSF002191|PR00061|PS01015|PTHR15680|SSF50104|TIGR01024 B2904_RS10850 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 B2904_RS10855 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011055|IPR016047 Duplicated hybrid motif|Peptidase M23 G3DSA:2.70.70.10|PF01551|SSF51261 B2904_RS10860 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter PF09527 B2904_RS10865 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002638|IPR006406|IPR007229 Nicotinate phosphoribosyltransferase|Nicotinate phosphoribosyltransferase family|Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0004516|GO:0009435|GO:0019357 G3DSA:3.20.140.10|MF_00570|PF04095|PIRSF000484|PTHR11098|PTHR11098:SF16|SSF51690|SSF54675|TIGR01514 B2904_RS10870 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic G3DSA:2.60.120.380 B2904_RS10885 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005835|IPR029044 Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain GO:0009058|GO:0016779 G3DSA:3.90.550.10|PF00483|PTHR12526|PTHR12526:SF387|SSF159283|SSF53448 B2904_RS10890 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003382|IPR005252|IPR007085 Coenzyme A biosynthesis bifunctional protein CoaBC|DNA/pantothenate metabolism flavoprotein, C-terminal|Flavoprotein GO:0003824|GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 G3DSA:3.40.50.10300|G3DSA:3.40.50.1950|PF02441|PF04127|PTHR14359|PTHR14359:SF20|SSF102645|SSF52507|TIGR00521 B2904_RS10895 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF577|SM00382|SSF52540 B2904_RS10905 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001431|IPR007863|IPR011237|IPR011249|IPR011765 Metalloenzyme, LuxS/M16 peptidase-like|Peptidase M16 domain|Peptidase M16, C-terminal|Peptidase M16, N-terminal|Peptidase M16, zinc-binding site GO:0003824|GO:0004222|GO:0006508|GO:0046872 G3DSA:3.30.830.10|PF00675|PF05193|PS00143|PTHR11851|SSF63411 B2904_RS10915 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006124|IPR010045|IPR017849|IPR017850|IPR024052 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Metalloenzyme|Phosphopentomutase|Phosphopentomutase DeoB cap domain GO:0000287|GO:0003824|GO:0005737|GO:0008152|GO:0008973|GO:0009117|GO:0043094|GO:0046872 G3DSA:3.30.70.1250|G3DSA:3.40.720.10|MF_00740|PF01676|PIRSF001491|PTHR21110|PTHR21110:SF0|SSF143856|SSF53649|TIGR01696 B2904_RS10925 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006379|IPR023214 HAD-like domain|HAD-superfamily hydrolase, subfamily IIB G3DSA:3.40.50.1000|PF08282|PTHR10000|PTHR10000:SF16|SSF56784|TIGR01484 B2904_RS10930 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001602 Uncharacterised protein family UPF0047 G3DSA:2.60.120.460|PF01894|PIRSF004681|PTHR30615|PTHR30615:SF2|SSF111038|TIGR00149 B2904_RS10935 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR018756|IPR025102 Domain of unknown function DUF2314|Protein of unknown function DUF4026 PF10077|PF13218 B2904_RS10940 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic G3DSA:3.10.560.10 B2904_RS10955 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000836|IPR023050|IPR029057 Bifunctional protein PyrR|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0009116 G3DSA:3.40.50.2020|MF_01219|PF00156|PTHR11608|SSF53271 B2904_RS10960 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 PF03748|PTHR35091|PTHR35091:SF2 B2904_RS10965 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001543|IPR001689|IPR028976 CheC-like domain|Flagellar motor switch protein FliM|Surface presentation of antigen (SpoA) GO:0003774|GO:0009425|GO:0071973 G3DSA:2.30.330.10|G3DSA:3.40.1550.10|PF01052|PF02154|PIRSF002888|PR00955|PTHR30034|PTHR30034:SF0|SSF101801|SSF103039|TIGR01397 B2904_RS10970 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001172|IPR001543|IPR012826|IPR028976 CheC-like domain|Flagellar motor switch FliN|Flagellar motor switch FliN/Type III secretion HrcQb|Surface presentation of antigen (SpoA) GO:0003774|GO:0006935|GO:0009288|GO:0009425|GO:0016020|GO:0071973 G3DSA:2.30.330.10|G3DSA:3.40.1550.10|PF01052|PR00956|PTHR22617|SSF101801|SSF103039|TIGR02480 B2904_RS10980 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000631|IPR004443|IPR017953|IPR029056|IPR030677 ATP-dependent (S)-NAD(P)H-hydrate dehydratase|Bifunctional NAD(P)H-hydrate repair enzyme Nnr|Carbohydrate kinase, predicted, conserved site|Ribokinase-like|YjeF N-terminal domain GO:0052855 G3DSA:3.40.1190.20|G3DSA:3.40.50.10260|MF_01965|PF01256|PF03853|PIRSF017184|PS01050|PTHR12592|PTHR12592:SF0|SSF53613|SSF64153|TIGR00196|TIGR00197 B2904_RS10990 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005746|IPR012336|IPR013766|IPR017937 Thioredoxin|Thioredoxin domain|Thioredoxin, conserved site|Thioredoxin-like fold GO:0006662|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00085|PIRSF000077|PR00421|PS00194|PTHR10438|SSF52833|TIGR01068 B2904_RS10995 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000262|IPR013785 Aldolase-type TIM barrel|FMN-dependent dehydrogenase GO:0003824|GO:0016491 G3DSA:3.20.20.70|PF01070|PTHR10578|PTHR10578:SF65|SM01240|SSF51395 B2904_RS11000 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 G3DSA:1.20.58.80|PF02255|PIRSF000699|PTHR34382|PTHR34382:SF2|SSF46973 B2904_RS11005 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001088|IPR015955|IPR016040|IPR019802|IPR022616 Glycoside hydrolase, family 4|Glycoside hydrolase, family 4, conserved site|Glycosyl hydrolase, family 4, C-terminal|Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal|NAD(P)-binding domain GO:0003824|GO:0004553|GO:0005975|GO:0016616|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.110.10|PF02056|PF11975|PR00732|PS01324|PTHR32092|PTHR32092:SF5|SSF51735|SSF56327 B2904_RS11010 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001360|IPR013781|IPR017853 Glycoside hydrolase family 1|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain GO:0004553|GO:0005975 G3DSA:3.20.20.80|PF00232|PR00131|PTHR10353|PTHR10353:SF73|SSF51445 B2904_RS11015 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003352|IPR004501|IPR004796 Phosphotransferase system, EIIC|Phosphotransferase system, EIIC component, type 3|Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016020|GO:0016021 PF02378|PIRSF006351|PTHR33989|TIGR00359|TIGR00410 B2904_RS11020 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR008589|IPR013785|IPR017853|IPR029000 Aldolase-type TIM barrel|Cyclophilin-like domain|Glycoside hydrolase superfamily|Protein of unknown function DUF871, prokaryotic GO:0003824 G3DSA:2.40.100.10|G3DSA:3.20.20.70|PF05913|PTHR38435|PTHR38435:SF1|SSF50891|SSF51445 B2904_RS11025 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 G3DSA:3.40.50.270|PF02302|PTHR34581|PTHR34581:SF2|SSF52794 B2904_RS11030 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002178|IPR003501|IPR007737|IPR011608|IPR011991|IPR013196|IPR016152 Helix-turn-helix, type 11|Mga helix-turn-helix domain|PRD domain|PTS EIIA type-2 domain|Phosphotransferase system, EIIB component, type 2/3|Phosphotransferase/anion transporter|Winged helix-turn-helix DNA-binding domain GO:0005215|GO:0006355|GO:0006810|GO:0008982|GO:0009401 G3DSA:1.10.10.10|G3DSA:1.10.1790.10|G3DSA:3.40.50.270|G3DSA:3.40.930.10|PF00359|PF00874|PF05043|PF08279|PTHR30185|PTHR30185:SF4|SSF52794|SSF55804|SSF63520 B2904_RS11035 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000032 Phosphocarrier HPr protein-like G3DSA:3.30.1340.10|PF00381|PR00107|PTHR33705|SSF55594|TIGR01003 B2904_RS11040 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001247|IPR003029|IPR004087|IPR004088|IPR012162|IPR012340|IPR015847|IPR015848|IPR020568|IPR022967|IPR027408 Exoribonuclease, phosphorolytic domain 1|Exoribonuclease, phosphorolytic domain 2|K Homology domain|K Homology domain, type 1|Nucleic acid-binding, OB-fold|PNPase/RNase PH domain|Polyribonucleotide nucleotidyltransferase|Polyribonucleotide nucleotidyltransferase, RNA-binding domain|RNA-binding domain, S1|Ribosomal protein S5 domain 2-type fold|S1 domain GO:0000175|GO:0003676|GO:0003723|GO:0004654|GO:0006396|GO:0006402 G3DSA:1.10.10.400|G3DSA:2.40.50.140|G3DSA:3.30.1370.10|G3DSA:3.30.230.70|MF_01595|PF00013|PF00575|PF01138|PF03725|PF03726|PIRSF005499|PTHR11252|PTHR11252:SF0|SM00316|SM00322|SSF50249|SSF54211|SSF54791|SSF55666|TIGR03591 B2904_RS11045 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000589|IPR005290|IPR009068 Ribosomal protein S15|Ribosomal protein S15, bacterial-type|S15/NS1, RNA-binding GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.10.287.10|MF_01343_B|PD157043|PF00312|PS00362|PTHR23321|SM01387|SSF47060|TIGR00952 B2904_RS11050 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002606|IPR014729|IPR015864|IPR015865|IPR023465|IPR023468 FAD synthetase|Riboflavin kinase|Riboflavin kinase domain|Riboflavin kinase domain, bacterial/eukaryotic|Riboflavin kinase, bacterial|Rossmann-like alpha/beta/alpha sandwich fold GO:0003919|GO:0008531|GO:0009231 G3DSA:2.40.30.30|G3DSA:3.40.50.620|PF01687|PF06574|PIRSF004491|PTHR22749|PTHR22749:SF0|SM00904|SSF52374|SSF82114|TIGR00083 B2904_RS11060 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002645 STAS domain G3DSA:3.30.750.24|SSF52091 B2904_RS11065 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004099|IPR016156|IPR023753 FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0016491|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF02852|PF07992|PR00368|PR00411|PTHR22912|PTHR22912:SF149|SSF51905|SSF55424 B2904_RS11080 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PTHR30290|PTHR30290:SF10|SSF53850 B2904_RS11085 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001404|IPR003594|IPR019805|IPR020568|IPR020575 Heat shock protein Hsp90 family|Heat shock protein Hsp90, N-terminal|Heat shock protein Hsp90, conserved site|Histidine kinase-like ATPase, C-terminal domain|Ribosomal protein S5 domain 2-type fold GO:0005524|GO:0006457|GO:0006950|GO:0051082 G3DSA:3.30.565.10|MF_00505|PF00183|PF02518|PIRSF002583|PR00775|PS00298|PTHR11528|PTHR11528:SF44|SM00387|SSF110942|SSF54211|SSF55874 B2904_RS11090 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR024402 Domain of unknown function DUF2726 PF10881 B2904_RS11095 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR024523 Protein of unknown function DUF3793 PF12672 B2904_RS11100 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001226|IPR008254|IPR010087|IPR029039 Flavodoxin, conserved site|Flavodoxin, short chain|Flavodoxin/nitric oxide synthase|Flavoprotein-like domain GO:0009055|GO:0010181 G3DSA:3.40.50.360|PF00258|PS00201|PTHR32145|PTHR32145:SF19|SSF52218|TIGR01753 B2904_RS11105 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR016037|IPR030960|IPR030963 3-dehydroquinate synthase AroB|3-dehydroquinate synthase domain|3-dehydroquinate synthase family GO:0003856|GO:0005737|GO:0009073|GO:0016838 G3DSA:1.20.1090.10|G3DSA:3.40.50.1970|MF_00110|PF01761|PIRSF001455|PTHR21090|SSF56796|TIGR01357 B2904_RS11120 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004813|IPR004814 Oligopeptide transporter OPT|Oligopeptide transporter, OPT superfamily GO:0055085 PF03169|PTHR31645|PTHR31645:SF0|TIGR00728|TIGR00733 B2904_RS11125 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001160|IPR002933|IPR011650 Peptidase M20|Peptidase M20, dimerisation domain|Peptidase M20C, Xaa-His dipeptidase GO:0006508|GO:0008152|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PIRSF016599|PR00934|PTHR11014|PTHR11014:SF54|SSF53187|SSF55031|TIGR01893 B2904_RS11130 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000771|IPR011289|IPR013785 Aldolase-type TIM barrel|Fructose-1,6-bisphosphate aldolase, class 2|Ketose-bisphosphate aldolase, class-II GO:0003824|GO:0004332|GO:0005975|GO:0006096|GO:0008270|GO:0016832|GO:0030388 G3DSA:3.20.20.70|PF01116|PIRSF001359|PS00602|PTHR30304|SSF51569|TIGR00167|TIGR01859 B2904_RS11135 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002747|IPR023227|IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal|S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal|SAM-dependent chlorinase/fluorinase G3DSA:2.40.30.90|PF01887|PIRSF006779|PTHR35092|PTHR35092:SF2|SSF101852|SSF102522 B2904_RS11140 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005122|IPR005273 Uracil-DNA glycosylase, family 4 domain|Uracil-DNA glycosylase-like G3DSA:3.40.470.10|PF03167|PTHR33693|PTHR33693:SF1|SM00986|SM00987|SSF52141|TIGR00758 B2904_RS11145 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002110|IPR020683 Ankyrin repeat|Ankyrin repeat-containing domain GO:0005515 G3DSA:1.25.40.20|PF12796|PF13606|PTHR24198|SM00248|SSF48403 B2904_RS11160 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 PF00209|PR00176|PS00610|PTHR11616|PTHR11616:SF167|SSF161070 B2904_RS11165 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000394|IPR007046|IPR007634 RNA polymerase sigma factor 54|RNA polymerase sigma factor 54, DNA-binding|RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PF00309|PF04552|PF04963|PIRSF000774|PR00045|PS00718|PTHR32248|PTHR32248:SF4|TIGR02395 B2904_RS11170 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 G3DSA:3.30.160.100|PF02482|SSF69754|TIGR00741 B2904_RS11175 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002178|IPR004715|IPR016152 PTS EIIA type-2 domain|Phosphotransferase system, IIA component fructose subfamily|Phosphotransferase/anion transporter GO:0005215|GO:0006810|GO:0008982|GO:0009401|GO:0016021 G3DSA:3.40.930.10|PF00359|PS00372|PTHR30505|PTHR30505:SF5|SSF55804|TIGR00848 B2904_RS11180 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003755|IPR011104|IPR011126|IPR027417|IPR028979 HPr kinase/phosphorylase, C-terminal|HPr(Ser) kinase/phosphorylase|HPr(Ser) kinase/phosphorylase, N-terminal|HPr(Ser) kinase/phosphorylase, N-terminal domain-like|P-loop containing nucleoside triphosphate hydrolase GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 G3DSA:3.40.1390.20|G3DSA:3.40.50.300|MF_01249|PF02603|PF07475|PTHR30305|PTHR30305:SF1|SSF53795|SSF75138|TIGR00679 B2904_RS11185 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004506|IPR014729|IPR023382 Adenine nucleotide alpha hydrolase-like domains|Rossmann-like alpha/beta/alpha sandwich fold|tRNA-specific 2-thiouridylase GO:0008033|GO:0016740|GO:0016783 G3DSA:2.30.30.280|G3DSA:2.40.30.10|G3DSA:3.40.50.620|MF_00144|PF03054|PTHR11933|PTHR11933:SF10|SSF52402|TIGR00420 B2904_RS11190 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007401 Protein of unknown function DUF454 PF04304|PIRSF016789|PTHR35813|PTHR35813:SF1 B2904_RS11195 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001684|IPR018261 Ribosomal protein L27|Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.40.50.100|MF_00539|PD003114|PF01016|PR00063|PS00831|PTHR15893|SSF110324|TIGR00062 B2904_RS11200 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007422 Cysteine peptidase C108, N-terminal of ribosomal L27 G3DSA:3.30.70.1490|PF04327|SSF118010 B2904_RS11205 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001787|IPR028909 Ribosomal protein L21|Ribosomal protein L21-like GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_01363|PF00829|PTHR21349|SSF141091|TIGR00061 B2904_RS11210 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR015391|IPR023058|IPR027304 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site|SurA N-terminal|Trigger factor/SurA domain G3DSA:3.10.50.40|PF09312|PF13616|PS01096|PTHR10657|PTHR10657:SF11|SSF109998|SSF54534 B2904_RS11220 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 G3DSA:3.90.850.10|PF01557|PTHR11820|PTHR11820:SF6|SSF56529 B2904_RS11225 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001267|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Thymidine kinase GO:0004797|GO:0005524 G3DSA:3.30.60.20|PF00265|PIRSF035805|SSF52540 B2904_RS11230 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 B2904_RS11235 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007560|IPR011990 Restriction endonuclease type IV, Mrr|Tetratricopeptide-like helical domain GO:0003677|GO:0004519|GO:0005515|GO:0009307 G3DSA:1.25.40.10|PF04471|SSF81901 B2904_RS11240 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005183|IPR012347 Domain of unknown function DUF305|Ferritin-related G3DSA:1.20.1260.10|PF03713|PTHR36933|PTHR36933:SF1 B2904_RS11245 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001451|IPR007691|IPR011004|IPR018357|IPR020573 Hexapeptide repeat|Hexapeptide transferase, conserved site|Trimeric LpxA-like|UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD|UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016410|GO:0016740|GO:0016747 G3DSA:2.160.10.10|MF_00523|PF00132|PF04613|PS00101|PTHR22572|PTHR22572:SF117|SSF51161|TIGR01853 B2904_RS11250 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|PTHR22911|SSF103481 B2904_RS11255 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005911|IPR006638|IPR023404|IPR032432 Elongator protein 3/MiaB/NifB|Protein YhcC-like|Radical SAM, C-terminal extension|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0051536 G3DSA:3.80.30.20|PF16199|PTHR11135|PTHR11135:SF1|SM00729|SSF102114|TIGR01212 B2904_RS11260 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000037|IPR020081|IPR023620 Small protein B|SsrA-binding protein|SsrA-binding protein, conserved site GO:0003723 G3DSA:2.40.280.10|MF_00023|PD004488|PF01668|PS01317|PTHR30308|PTHR30308:SF2|SSF74982|TIGR00086 B2904_RS11265 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000843|IPR001761|IPR010982|IPR028082 Lambda repressor-like, DNA-binding domain|Periplasmic binding protein-like I|Periplasmic binding protein/LacI sugar binding domain|Transcription regulator HTH, LacI GO:0003677|GO:0003700|GO:0006355 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF00532|PTHR30146|PTHR30146:SF30|SM00354|SSF47413|SSF53822 B2904_RS11270 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003760|IPR028082 Basic membrane lipoprotein|Periplasmic binding protein-like I GO:0005886 G3DSA:3.40.50.2300|PF02608|PTHR34296|PTHR34296:SF2|SSF53822 B2904_RS11275 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF239|SM00382|SSF52540 B2904_RS11280 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR32196|PTHR32196:SF30 B2904_RS11285 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR32196|PTHR32196:SF40 B2904_RS11290 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001910|IPR015910|IPR023186 Inosine/uridine-preferring nucleoside hydrolase|Inosine/uridine-preferring nucleoside hydrolase domain|Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 G3DSA:3.90.245.10|PF01156|PS01247|PTHR12304|PTHR12304:SF19|SSF53590 B2904_RS11295 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001261|IPR002933|IPR010182|IPR011650 ArgE/DapE/ACY1/CPG2/YscS, conserved site|N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase|Peptidase M20|Peptidase M20, dimerisation domain GO:0006508|GO:0008152|GO:0008237|GO:0016787|GO:0016813 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PS00759|PTHR11014|SSF53187|SSF55031|TIGR01910 B2904_RS11300 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR010768|IPR017027|IPR029062 Class I glutamine amidotransferase-like|Putative glutamine amidotransferase|Uncharacterised conserved protein UCP034405 G3DSA:3.40.50.880|PF07090|PIRSF034405|PTHR37947|SSF52317 B2904_RS11305 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002139|IPR002173|IPR011611|IPR011877|IPR029056 Carbohydrate kinase PfkB|Carbohydrate/puine kinase, PfkB, conserved site|Ribokinase|Ribokinase, bacterial type|Ribokinase-like GO:0004747|GO:0006014|GO:0016773 G3DSA:3.40.1190.20|PF00294|PR00990|PS00583|PS00584|PTHR10584|PTHR10584:SF184|SSF53613|TIGR02152 B2904_RS11345 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005358 Putative zinc- or iron-chelating domain containing protein PF03692 B2904_RS11350 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006674 HD domain G3DSA:1.10.3210.10|PF01966|SSF109604 B2904_RS11360 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR028051|IPR028976 CheC-like domain|Chemotaxis phosphatase CheX-like domain G3DSA:3.40.1550.10|PF13690|PTHR39452|PTHR39452:SF1|SSF103039 B2904_RS11365 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001597|IPR015421|IPR015422|IPR015424|IPR023603 Aromatic amino acid beta-eliminating lyase/threonine aldolase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Threonine aldolase GO:0003824|GO:0006520|GO:0016829 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01212|PIRSF017617|PTHR10289|PTHR10289:SF5|SSF53383 B2904_RS11370 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006218|IPR006268|IPR013785 Aldolase-type TIM barrel|DAHP synthetase I/KDSA|Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0003824|GO:0009058|GO:0009073|GO:0016832 G3DSA:3.20.20.70|G3DSA:3.30.70.1140|PF00793|PTHR21057|PTHR21057:SF1|SSF51569|TIGR01361 B2904_RS11375 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000722|IPR006592|IPR007066|IPR007080|IPR007081|IPR007083|IPR012754 DNA-directed RNA polymerase, subunit beta-prime|RNA polymerase Rpb1, domain 1|RNA polymerase Rpb1, domain 3|RNA polymerase Rpb1, domain 4|RNA polymerase Rpb1, domain 5|RNA polymerase, N-terminal|RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 G3DSA:2.40.40.20|G3DSA:2.40.50.100|MF_01322|PF00623|PF04983|PF04997|PF04998|PF05000|PTHR19376|PTHR19376:SF32|SM00663|SSF64484|TIGR02386 B2904_RS11380 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007120|IPR007121|IPR007641|IPR007642|IPR007644|IPR007645|IPR010243|IPR014724|IPR015712|IPR019462 DNA-directed RNA polymerase, beta subunit|DNA-directed RNA polymerase, beta subunit, external 1 domain|DNA-directed RNA polymerase, subunit 2|DNA-directed RNA polymerase, subunit 2, domain 6|RNA polymerase Rpb2, OB-fold|RNA polymerase Rpb2, domain 2|RNA polymerase Rpb2, domain 3|RNA polymerase Rpb2, domain 7|RNA polymerase, beta subunit, conserved site|RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351|GO:0032549 G3DSA:2.30.150.10|G3DSA:2.40.270.10|G3DSA:2.40.50.100|G3DSA:2.40.50.150|G3DSA:3.90.1100.10|G3DSA:3.90.1110.10|MF_01321|PF00562|PF04560|PF04561|PF04563|PF04565|PF10385|PS01166|PTHR20856|PTHR20856:SF20|SSF64484|TIGR02013 B2904_RS11385 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000206|IPR008932|IPR013823|IPR014719 Ribosomal protein L7/L12|Ribosomal protein L7/L12, C-terminal|Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like|Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.20.5.710|G3DSA:3.30.1390.10|MF_00368|PD001326|PF00542|PF16320|SSF48300|SSF54736|TIGR00855 B2904_RS11390 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001790|IPR002363|IPR022973 Ribosomal protein L10|Ribosomal protein L10, eubacterial, conserved site|Ribosomal protein L10P GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0042254 MF_00362|PD968187|PF00466|PS01109|PTHR11560|SSF160369 B2904_RS11395 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002143|IPR005878|IPR016094|IPR016095|IPR023673|IPR023674|IPR028364 Ribosomal protein L1|Ribosomal protein L1, 2-layer alpha/beta-sandwich|Ribosomal protein L1, 3-layer alpha/beta-sandwich|Ribosomal protein L1, bacterial-type|Ribosomal protein L1, conserved site|Ribosomal protein L1-like|Ribosomal protein L1/ribosomal biogenesis protein GO:0003723|GO:0003735|GO:0006412|GO:0015934 G3DSA:3.30.190.20|G3DSA:3.40.50.790|MF_01318_B|PF00687|PIRSF002155|PS01199|PTHR23105|PTHR23105:SF5|SSF56808|TIGR01169 B2904_RS11400 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000911|IPR006519|IPR020783|IPR020784 Ribosomal protein L11, C-terminal|Ribosomal protein L11, N-terminal|Ribosomal protein L11, bacterial-type|Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 G3DSA:1.10.10.250|G3DSA:3.30.1550.10|MF_00736|PD001367|PF00298|PF03946|PTHR11661|SM00649|SSF46906|SSF54747|TIGR01632 B2904_RS11405 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001062|IPR005824|IPR006645|IPR008991|IPR014722 KOW|NusG, N-terminal|Ribosomal protein L2 domain 2|Transcription antitermination protein, NusG|Translation protein SH3-like domain GO:0006355|GO:0032784 G3DSA:2.30.30.30|G3DSA:3.30.70.940|MF_00948|PF00467|PF02357|PR00338|PTHR30265|SM00738|SM00739|SSF50104|SSF82679|TIGR00922 B2904_RS11410 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001901|IPR005807|IPR022943 Preprotein translocase subunit SecE|Protein translocase complex, SecE/Sec61-gamma subunit|SecE subunit of protein translocation complex GO:0006605|GO:0006886|GO:0009306|GO:0015450|GO:0016020|GO:0016021 G3DSA:1.20.5.1030|MF_00422|PF00584|TIGR00964 B2904_RS11420 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001705|IPR011332|IPR018264 Ribosomal protein L33|Ribosomal protein L33, conserved site|Zinc-binding ribosomal protein GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00294|PF00471|PS00582|PTHR15238|PTHR15238:SF3|SSF57829|TIGR01023 B2904_RS11430 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004399|IPR013749|IPR029056 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase|Pyridoxamine kinase/Phosphomethylpyrimidine kinase|Ribokinase-like GO:0008972|GO:0009228 G3DSA:3.40.1190.20|PF08543|PTHR20858|PTHR20858:SF17|SSF53613|TIGR00097 B2904_RS11435 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:2.40.10.220|G3DSA:3.40.50.2300|PF00072|SSF52172 B2904_RS11440 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005321|IPR016117 ArgJ-like domain|Peptidase S58, DmpA G3DSA:3.60.70.12|PF03576|PTHR36512|PTHR36512:SF3|SSF56266 B2904_RS11450 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003741 LUD domain PF02589|PTHR36179 B2904_RS11455 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR009078|IPR011566|IPR012347 Ferritin-like superfamily|Ferritin-related|Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 G3DSA:1.20.1260.10|PF03232|PTHR37165|PTHR37165:SF1|SSF47240|TIGR04537 B2904_RS11460 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007544 Encapsulating protein for peroxidase GO:0008233|GO:0042742 PF04454|PIRSF019254|PTHR37165|PTHR37165:SF1 B2904_RS11465 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003848 Domain of unknown function DUF218 G3DSA:1.10.3620.10|PF02698 B2904_RS11470 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004655|IPR013747|IPR013751|IPR016039 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III|3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal|3-oxoacyl-[acyl-carrier-protein] synthase 3|Thiolase-like GO:0003824|GO:0004315|GO:0006633|GO:0008152 G3DSA:3.40.47.10|MF_01815|PF08541|PF08545|PTHR34069|PTHR34069:SF2|SSF53901|TIGR00747 B2904_RS11475 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002052|IPR002941|IPR029063 DNA methylase N-4/N-6|DNA methylase, N-6 adenine-specific, conserved site|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0003677|GO:0006306|GO:0008168|GO:0008170|GO:0032259 G3DSA:3.40.50.150|PF01555|PS00092|SSF53335 B2904_RS11480 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002155|IPR016039|IPR020610|IPR020613|IPR020615|IPR020616|IPR020617 Thiolase|Thiolase, C-terminal|Thiolase, N-terminal|Thiolase, active site|Thiolase, acyl-enzyme intermediate active site|Thiolase, conserved site|Thiolase-like GO:0003824|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00108|PF02803|PIRSF000429|PS00098|PS00099|PS00737|PTHR18919|PTHR18919:SF95|SSF53901|TIGR01930 B2904_RS11495 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 B2904_RS11500 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|PIRSF006603|PTHR11206|PTHR11206:SF138 B2904_RS11505 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006368|IPR016040 GDP-mannose 4,6-dehydratase|NAD(P)-binding domain GO:0008446|GO:0019673 G3DSA:3.40.50.720|G3DSA:3.90.25.10|MF_00955|PF16363|PTHR10366|PTHR10366:SF32|SSF51735|TIGR01472 B2904_RS11510 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001509|IPR016040|IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase|NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0009226|GO:0016491|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|MF_00956|PF01370|PTHR10366|PTHR10366:SF246|SSF51735 B2904_RS11520 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001036|IPR005791|IPR022645|IPR022646|IPR022813 Acriflavin resistance protein|Protein translocase subunit SecD|Protein-export membrane protein SecD/SecF, archaeal and bacterial|Protein-export membrane protein SecD/SecF, bacterial|Protein-export membrane protein SecD/SecF/SecDF, conserved site GO:0005215|GO:0006810|GO:0006886|GO:0015450|GO:0016020 G3DSA:1.20.1640.10|MF_01463_B|PF02355|PF07549|PR00702|PTHR30081|PTHR30081:SF1|SSF82866|TIGR00916|TIGR01129 B2904_RS11525 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005665|IPR022645|IPR022646|IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial|Protein-export membrane protein SecD/SecF, bacterial|Protein-export membrane protein SecD/SecF/SecDF, conserved site|Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 G3DSA:1.20.1640.10|MF_01464_B|PF02355|PF07549|PR01755|PTHR30081|SSF82866|TIGR00966 B2904_RS11530 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic G3DSA:1.25.40.120|SSF48439 B2904_RS11535 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004547|IPR006148 Glucosamine-6-phosphate isomerase|Glucosamine/galactosamine-6-phosphate isomerase GO:0004342|GO:0005975|GO:0006044 G3DSA:3.40.50.1360|PF01182|PTHR11280|SSF100950 B2904_RS11540 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000669|IPR008927|IPR013118|IPR013131|IPR013328|IPR016040|IPR023028 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|Mannitol dehydrogenase|Mannitol dehydrogenase, C-terminal|Mannitol dehydrogenase, N-terminal|Mannitol-1-phosphate 5-dehydrogenase|NAD(P)-binding domain GO:0003824|GO:0008152|GO:0008926|GO:0016491|GO:0019594|GO:0050662|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|MF_00196|PF01232|PF08125|PR00084|PTHR30524|PTHR30524:SF0|SSF48179|SSF51735 B2904_RS11545 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003352|IPR003501|IPR004718|IPR029503 Phosphotransferase system EIIB component, mannitol-specific|Phosphotransferase system, EIIB component, type 2/3|Phosphotransferase system, EIIC|Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016020|GO:0016021|GO:0022872 G3DSA:3.40.50.10370|PF02302|PF02378|PTHR30181|PTHR30181:SF2|SSF52794|TIGR00851 B2904_RS11550 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006439|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain GO:0008152|GO:0016787 G3DSA:3.40.50.1000|PF13419|PTHR18901|SSF56784|TIGR01509 B2904_RS11555 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002178|IPR016152 PTS EIIA type-2 domain|Phosphotransferase/anion transporter GO:0005215|GO:0006810 G3DSA:3.40.930.10|PF00359|PTHR30505|PTHR30505:SF3|SSF55804 B2904_RS11560 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001085|IPR015421|IPR015422|IPR015424|IPR019798 Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Serine hydroxymethyltransferase|Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0003824|GO:0004372|GO:0006544|GO:0006563|GO:0016740|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00051|PF00464|PIRSF000412|PS00096|PTHR11680|SSF53383 B2904_RS11575 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002869|IPR019752 Pyruvate-flavodoxin oxidoreductase, central domain|Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016491|GO:0016903|GO:0055114 G3DSA:3.40.920.10|PF01558|PTHR32154|PTHR32154:SF15|SSF53323 B2904_RS11580 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011766|IPR029061 Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 G3DSA:3.40.50.970|PF02775|PTHR18968|PTHR18968:SF117|SSF52518 B2904_RS11585 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002880|IPR009014|IPR029061|IPR033412 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal|Pyruvate:ferredoxin oxidoreductase, core domain II|Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152|GO:0016491|GO:0055114 G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF01855|PF17147|PTHR32154|PTHR32154:SF19|SSF52518|SSF52922 B2904_RS11590 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain G3DSA:3.30.70.20|PF12838|PS00198|PTHR10849|PTHR10849:SF12|SSF54862 B2904_RS11600 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030679 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-type amino acid transport system, ATPase component, HisP-type|P-loop containing nucleoside triphosphate hydrolase GO:0003333|GO:0005524|GO:0015424|GO:0016887 G3DSA:3.40.50.300|PF00005|PIRSF039085|PS00211|PTHR24220|PTHR24220:SF327|SM00382|SSF52540 B2904_RS11605 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|PTHR30614|PTHR30614:SF11|SSF161098|TIGR01726 B2904_RS11615 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011990|IPR021280 Protein of unknown function DUF2723|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF11028|PTHR16214|SSF48452 B2904_RS11645 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002085|IPR011032|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF08240|PF13602|PTHR11695|PTHR11695:SF294|SM00829|SSF50129|SSF51735 B2904_RS11660 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003593|IPR003959|IPR004487|IPR019489|IPR025943|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|Clp ATPase, C-terminal|Clp protease, ATP-binding subunit ClpX|P-loop containing nucleoside triphosphate hydrolase|Sigma-54 interaction domain, ATP-binding site 2 GO:0005524|GO:0006457|GO:0051082 G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00175|PF07724|PF10431|PS00676|PTHR11262|PTHR11262:SF4|SM00382|SM01086|SSF52540|TIGR00382 B2904_RS11670 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|PF01370|PTHR10366|PTHR10366:SF469|SSF51735 B2904_RS11675 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006665 OmpA-like domain G3DSA:3.30.1330.60|PF00691|SSF103088 B2904_RS11680 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000160|IPR001789|IPR011006|IPR029787 CheY-like superfamily|GGDEF domain|Nucleotide cyclase|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.30.70.270|G3DSA:3.40.50.2300|PF00072|PF00990|SM00267|SM00448|SSF52172|SSF55073|TIGR00254 B2904_RS11685 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006070|IPR017945 DHBP synthase RibB-like alpha/beta domain|YrdC-like domain GO:0003725 G3DSA:3.90.870.10|PF01300|PTHR17490|SSF55821|TIGR00057 B2904_RS11690 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001478|IPR004387|IPR008915 PDZ domain|Peptidase M50|Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0005515|GO:0006508|GO:0016021 G3DSA:2.30.42.10|PF02163|PF13180|PTHR22939|PTHR22939:SF78|SM00228|SSF50156|TIGR00054 B2904_RS11695 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|PTHR36113|PTHR36113:SF1|SSF54593 B2904_RS11700 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002035|IPR008912 Uncharacterised protein family CoxE-like|von Willebrand factor, type A PF05762|PTHR30634|PTHR30634:SF7|SSF53300 B2904_RS11705 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain PF13539|SSF55166 B2904_RS11715 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR008173|IPR023577|IPR033469 Adenylyl cyclase CyaB|CYTH domain|CYTH-like domain G3DSA:2.40.320.10|PTHR21028|PTHR21028:SF2|SSF55154|TIGR00318 B2904_RS11720 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR008537 Protein of unknown function DUF819 PF05684|PTHR34289|PTHR34289:SF3 B2904_RS11725 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002312|IPR004115|IPR004364|IPR004365|IPR004524|IPR012340|IPR018150|IPR029351 Aminoacyl-tRNA synthetase, class II (D/K/N)|Aminoacyl-tRNA synthetase, class II (D/K/N)-like|Aspartate-tRNA ligase, bacterial/mitochondrial-type|Aspartyl/Asparaginyl-tRNA synthetase, class IIb|GAD domain|GAD-like domain|Nucleic acid-binding, OB-fold|OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0000166|GO:0003676|GO:0004812|GO:0005524|GO:0005737|GO:0006418|GO:0016874 G3DSA:2.40.50.140|G3DSA:3.30.1360.30|G3DSA:3.30.930.10|MF_00044|PF00152|PF01336|PF02938|PR01042|PTHR22594|PTHR22594:SF5|SSF50249|SSF55261|SSF55681|TIGR00459 B2904_RS11730 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001440|IPR011990|IPR019734|IPR023114 Elongated TPR repeat-containing domain|Tetratricopeptide repeat|Tetratricopeptide repeat 1|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.10.150.160|G3DSA:1.25.40.10|PF00515|PTHR23083|PTHR23083:SF416|SM00028|SSF48452 B2904_RS11735 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PF01235|PR00175|PS00873|PTHR30330|PTHR30330:SF1|TIGR00835 B2904_RS11745 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006437 Bacteriophage terminase, large subunit GO:0006323 PF04466 B2904_RS11770 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002110|IPR020683 Ankyrin repeat|Ankyrin repeat-containing domain GO:0005515 G3DSA:1.25.40.20|PF12796|PF13637|PR01415|PTHR24198|SM00248|SSF48403 B2904_RS11780 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007759 HB1/Asxl, restriction endonuclease HTH domain GO:0006351|GO:0006355 PF05066 B2904_RS11785 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR025328 Domain of unknown function DUF4234 PF14018 B2904_RS11795 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002110|IPR020683 Ankyrin repeat|Ankyrin repeat-containing domain GO:0005515 G3DSA:1.25.40.20|PF12796|PF13857|PR01415|PTHR24198|SM00248|SSF48403 B2904_RS11800 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002110|IPR020683 Ankyrin repeat|Ankyrin repeat-containing domain GO:0005515 G3DSA:1.25.40.20|PF12796|PTHR24198|SM00248|SSF48403 B2904_RS11810 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001539|IPR020988 Peptidase U32|Peptidase U32, collagenase GO:0006508|GO:0008233 PF01136|PF12392|PTHR30217|PTHR30217:SF10 B2904_RS11815 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003352|IPR004501|IPR004796 Phosphotransferase system, EIIC|Phosphotransferase system, EIIC component, type 3|Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016020|GO:0016021 PF02378|PIRSF006351|PTHR33989|TIGR00359|TIGR00410 B2904_RS11820 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003352|IPR004501|IPR004796 Phosphotransferase system, EIIC|Phosphotransferase system, EIIC component, type 3|Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016020|GO:0016021 PF02378|PIRSF006351|PTHR33989|TIGR00410 B2904_RS11825 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003352|IPR004501|IPR004796 Phosphotransferase system, EIIC|Phosphotransferase system, EIIC component, type 3|Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016020|GO:0016021 PF02378|PIRSF006351|PTHR33989|TIGR00410 B2904_RS11830 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001360|IPR013781|IPR017853|IPR018120|IPR033132 Glycoside hydrolase family 1|Glycoside hydrolase family 1, active site|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycosyl hydrolases family 1, N-terminal conserved site GO:0004553|GO:0005975 G3DSA:3.20.20.80|PF00232|PR00131|PS00572|PS00653|PTHR10353|PTHR10353:SF74|SSF51445 B2904_RS11835 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 G3DSA:1.10.3860.10|PF00375|PR00173|PTHR11958|SSF118215 B2904_RS11840 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 G3DSA:3.40.50.960|MF_00178|PF00885|PTHR21058|SSF52121|TIGR00114 B2904_RS11850 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001783|IPR017938|IPR023366|IPR026017 ATP synthase subunit alpha-like domain|Lumazine-binding domain|Lumazine-binding protein|Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 G3DSA:2.40.30.20|PF00677|PIRSF000498|PTHR21098|SSF63380|TIGR00187 B2904_RS11855 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002125|IPR002734|IPR004794|IPR011549|IPR016193|IPR024072 Bacterial bifunctional deaminase-reductase, C-terminal|Cytidine and deoxycytidylate deaminases, zinc-binding|Cytidine deaminase-like|Dihydrofolate reductase-like domain|Riboflavin biosynthesis protein RibD|Riboflavin-specific deaminase, C-terminal GO:0003824|GO:0008270|GO:0008703|GO:0008835|GO:0009231|GO:0050661|GO:0055114 G3DSA:3.40.140.10|G3DSA:3.40.430.10|PF00383|PF01872|PIRSF006769|PTHR11079|PTHR11079:SF10|SSF53597|SSF53927|TIGR00227|TIGR00326 B2904_RS11860 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005234|IPR011991 Chromosome segregation/condensation protein ScpB|Winged helix-turn-helix DNA-binding domain GO:0051304 G3DSA:1.10.10.10|PF04079|PIRSF019345|PTHR34298|PTHR34298:SF2|SSF46785|TIGR00281 B2904_RS11865 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000086|IPR015797|IPR020084 NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site GO:0016787 G3DSA:3.90.79.10|PF00293|PS00893|PTHR22769|SSF55811 B2904_RS11870 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006158|IPR006638|IPR023404|IPR023970 Cobalamin (vitamin B12)-binding domain|Elongator protein 3/MiaB/NifB|Methylthiotransferase/radical SAM-type protein|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0031419|GO:0046872|GO:0051536 G3DSA:3.80.30.20|PF02310|PTHR11918|PTHR11918:SF64|SM00729|SSF102114 B2904_RS11875 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005358 Putative zinc- or iron-chelating domain containing protein PF03692 B2904_RS11885 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PTHR33164|SM00347|SSF46785 B2904_RS11890 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 PF00209|PR00176|PS00610|PTHR11616|PTHR11616:SF167|SSF161070 B2904_RS11895 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004424|IPR013750|IPR014721|IPR020568 4-diphosphocytidyl-2C-methyl-D-erythritol kinase|GHMP kinase, C-terminal domain|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0016114|GO:0050515 G3DSA:3.30.230.10|G3DSA:3.30.70.890|MF_00061|PIRSF010376|PTHR20861|PTHR20861:SF2|SSF54211|SSF55060|TIGR00154 B2904_RS11900 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 G3DSA:3.60.110.10|PF00795|PTHR23088|SSF56317 B2904_RS11910 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000653|IPR015421|IPR015422|IPR015424 DegT/DnrJ/EryC1/StrS aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01041|PIRSF000390|PTHR30244|PTHR30244:SF15|SSF53383 B2904_RS11925 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR024623 Uncharacterised protein family YtxH PF12732 B2904_RS11930 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic G3DSA:1.20.5.110 B2904_RS11935 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR027304 Trigger factor/SurA domain SSF109998 B2904_RS11945 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR008915 Peptidase M50 GO:0004222|GO:0006508 PF02163|PTHR22939|PTHR22939:SF104 B2904_RS11950 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002649|IPR016009|IPR023148|IPR029026|IPR029028 Alpha/beta knot methyltransferases|tRNA (guanine-N1-)-methyltransferase, C-terminal|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA (guanine-N1-)-methyltransferase, bacteria|tRNA methyltransferase TRMD/TRM10-type domain GO:0008033|GO:0052906 G3DSA:1.10.1270.20|G3DSA:3.40.1280.10|MF_00605|PF01746|PIRSF000386|PTHR32125|PTHR32125:SF1|SSF75217|TIGR00088 B2904_RS11960 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003593|IPR003959|IPR008921|IPR021886|IPR027417|IPR032423 AAA ATPase, C-terminal domain|AAA+ ATPase domain|ATPase, AAA-type, core|DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|MgsA AAA+ ATPase C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0005524|GO:0006260 G3DSA:1.10.3710.10|G3DSA:1.10.8.60|G3DSA:1.20.272.10|G3DSA:3.40.50.300|PF00004|PF12002|PF16193|PTHR13779|PTHR13779:SF32|SM00382|SSF48019|SSF52540 B2904_RS11965 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|SSF55729 B2904_RS11975 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR025500 Protein of unknown function DUF4390 PF14334 B2904_RS11980 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000064 Endopeptidase, NLPC/P60 domain G3DSA:3.90.1720.10|PF00877|SSF54001 B2904_RS11985 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000642|IPR003593|IPR003959|IPR003960|IPR005936|IPR011546|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, conserved site|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase|Peptidase M41|Peptidase M41, FtsH extracellular|Peptidase, FtsH GO:0004222|GO:0005524|GO:0006508|GO:0008270|GO:0016020|GO:0016021 G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_01458|PF00004|PF01434|PF06480|PS00674|PTHR23076|SM00382|SSF140990|SSF52540|TIGR01241 B2904_RS11990 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 G3DSA:1.10.3860.10|PF00375|PR00173|PTHR11958|PTHR11958:SF53|SSF118215 B2904_RS11995 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 G3DSA:1.10.3860.10|PF00375|PR00173|PTHR11958|PTHR11958:SF53|SSF118215 B2904_RS12000 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|PTHR22911|SSF103481 B2904_RS12005 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR018677 Domain of unknown function DUF2157 PF09925 B2904_RS12010 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR021215 Protein of unknown function DUF2752 PF10825 B2904_RS12030 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004300|IPR011330|IPR015293|IPR027291|IPR028995 Domain of unknown function DUF1957|Glycoside hydrolase 38/57, N-terminal domain|Glycoside hydrolase families 57/38, central domain|Glycoside hydrolase family 57, N-terminal domain|Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 G3DSA:1.20.1430.10|G3DSA:3.20.110.10|PF03065|PF09210|PTHR41695|SSF88688|SSF88713 B2904_RS12040 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011704|IPR027417 ATPase, dynein-related, AAA domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF07728|PTHR37291|PTHR37291:SF1|SSF52540 B2904_RS12045 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR019292 5-methylcytosine restriction system component PF10117 B2904_RS12050 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001932 PPM-type phosphatase domain GO:0003824 G3DSA:3.60.40.10|SSF81606 B2904_RS12055 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003594 Histidine kinase-like ATPase, C-terminal domain G3DSA:3.30.565.10|PF13581|PTHR35526|PTHR35526:SF1|SSF55874 B2904_RS12065 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003959|IPR027417 ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF13304|SSF52540 B2904_RS12070 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003356|IPR029063 DNA methylase, adenine-specific|S-adenosyl-L-methionine-dependent methyltransferase GO:0003677|GO:0006306|GO:0008170 G3DSA:3.40.50.150|PF02384|PR00507|SSF53335 B2904_RS12080 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 PF01420|PTHR30408|PTHR30408:SF2|SSF116734 B2904_RS12110 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000120|IPR004412|IPR020556|IPR023631 Amidase|Amidase signature domain|Amidase, conserved site|Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0016884 G3DSA:3.90.1300.10|MF_00120|PF01425|PS00571|PTHR11895|PTHR11895:SF7|SSF75304|TIGR00132 B2904_RS12115 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 B2904_RS12120 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007419 BFD-like [2Fe-2S]-binding domain PF04324 B2904_RS12125 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR016040 NAD(P)-binding domain G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF16363|PTHR10366|PTHR10366:SF399|SSF51735 B2904_RS12130 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|PTHR24314|PTHR24314:SF12|SSF51735 B2904_RS12135 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002495|IPR029044 Glycosyl transferase, family 8|Nucleotide-diphospho-sugar transferases GO:0016757 G3DSA:3.90.550.10|PF01501|PTHR13778|PTHR13778:SF1|SSF53448 B2904_RS12140 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 PF04973|PTHR36122|PTHR36122:SF2|TIGR01528 B2904_RS12145 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004821|IPR014729|IPR027417 Cytidyltransferase-like domain|P-loop containing nucleoside triphosphate hydrolase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0009058 G3DSA:3.40.50.300|G3DSA:3.40.50.620|PF01467|PF13521|PTHR37512|SSF52374|SSF52540|TIGR00125 B2904_RS12150 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR024445 ISXO2-like transposase domain PF12762|SM01126 B2904_RS12160 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001460|IPR012338 Beta-lactamase/transpeptidase-like|Penicillin-binding protein, transpeptidase GO:0008658 G3DSA:3.40.710.10|PF00905|PTHR30627|PTHR30627:SF6|SSF56601 B2904_RS12175 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007838 Cell division protein ZapA-like PF05164|SSF102829 B2904_RS12180 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003744 Protein of unknown function DUF165 PF02592|PTHR34300|PTHR34300:SF2|TIGR00697 B2904_RS12185 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001029|IPR001492 Flagellin|Flagellin, D0/D1 domain GO:0005198|GO:0009420|GO:0071973 G3DSA:1.20.1330.10|PF00669|PF00700|PR00207|PTHR30244|PTHR30244:SF1|SSF64518 B2904_RS12195 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic G3DSA:3.40.630.10|SSF53187 B2904_RS12205 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR025641 Domain of unknown function DUF4340 PF14238 B2904_RS12210 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001227|IPR004410|IPR014043|IPR016035|IPR016036|IPR020801|IPR024925 Acyl transferase|Acyl transferase domain|Acyl transferase/acyl hydrolase/lysophospholipase|Malonyl CoA-acyl carrier protein transacylase|Malonyl CoA-acyl carrier protein transacylase, FabD-type|Malonyl-CoA ACP transacylase, ACP-binding|Polyketide synthase, acyl transferase domain GO:0003824|GO:0004314|GO:0008152|GO:0016740 G3DSA:3.30.70.250|G3DSA:3.40.366.10|PF00698|PIRSF000446|PTHR10982|SM00827|SSF52151|SSF55048|TIGR00128 B2904_RS12215 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000866|IPR012336|IPR017559|IPR019479|IPR024706 Alkyl hydroperoxide reductase subunit C|Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Peroxiredoxin, AhpC-type|Peroxiredoxin, C-terminal|Thioredoxin-like fold GO:0006979|GO:0016209|GO:0016491|GO:0051920|GO:0055114 G3DSA:3.40.30.10|PF00578|PF10417|PIRSF000239|PTHR10681|PTHR10681:SF121|SSF52833|TIGR03137 B2904_RS12220 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002695|IPR011607|IPR016193|IPR024051 AICAR transformylase domain|AICARFT/IMPCHase bienzyme|Cytidine deaminase-like|Methylglyoxal synthase-like domain GO:0003824|GO:0003937|GO:0004643|GO:0006164 G3DSA:3.40.140.20|G3DSA:3.40.50.1380|MF_00139|PF01808|PF02142|PIRSF000414|PTHR11692|PTHR11692:SF2|SM00798|SM00851|SSF52335|SSF53927|TIGR00355 B2904_RS12225 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003959|IPR027417 ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF13304|PTHR40396|SSF52540 B2904_RS12235 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000944|IPR011991|IPR017039 Transcription regulator Rrf2-type|Virulence factor BrkB|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF02082|PF03631|PTHR30213|SSF46785 B2904_RS12255 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001647|IPR009057|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PF14278|PTHR30055|PTHR30055:SF55|SSF46689 B2904_RS12270 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PTHR11751|PTHR11751:SF294|SSF53383 B2904_RS12280 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001444|IPR006300 Flagellar basal body rod protein, N-terminal|Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 PF00460|PIRSF002889|PTHR30435|PTHR30435:SF12|TIGR01396 B2904_RS12285 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001444|IPR006299|IPR010930|IPR019776 Flagellar basal body rod protein, N-terminal|Flagellar basal body rod protein, conserved site|Flagellar basal-body rod protein FlgC|Flagellar basal-body/hook protein, C-terminal domain GO:0030694|GO:0071973 PF00460|PF06429|PS00588|PTHR30435|PTHR30435:SF2|TIGR01395 B2904_RS12290 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 PF02049|PR01006|TIGR00205 B2904_RS12300 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002110|IPR020683 Ankyrin repeat|Ankyrin repeat-containing domain GO:0005515 G3DSA:1.25.40.20|PF12796|PTHR24198|SM00248|SSF48403 B2904_RS12305 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30346|SSF46785|SSF53850 B2904_RS12310 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000383|IPR029058 Alpha/Beta hydrolase fold|Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 G3DSA:3.40.50.1820|PF02129|PTHR17630|PTHR17630:SF49|SSF53474 B2904_RS12315 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001451|IPR011004|IPR018357 Hexapeptide repeat|Hexapeptide transferase, conserved site|Trimeric LpxA-like GO:0016740 G3DSA:2.160.10.10|PF00132|PF14602|PS00101|PTHR23416|PTHR23416:SF58|SSF51161 B2904_RS12320 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002716|IPR003714|IPR027417|IPR029060 P-loop containing nucleoside triphosphate hydrolase|PIN domain|PIN domain-like|PhoH-like protein GO:0005524 G3DSA:3.40.50.1010|G3DSA:3.40.50.300|PF02562|PF13638|PTHR30473|PTHR30473:SF2|SM00670|SSF52540 B2904_RS12325 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR024445 ISXO2-like transposase domain PF12762|SM01126 B2904_RS12335 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001381|IPR013785 3-dehydroquinate dehydratase type I|Aldolase-type TIM barrel GO:0003824|GO:0003855 G3DSA:3.20.20.70|MF_00214|PF01487|PTHR21089|PTHR21089:SF5|SSF51569|TIGR01093 B2904_RS12340 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011342|IPR013708|IPR016040|IPR022893 NAD(P)-binding domain|Shikimate dehydrogenase|Shikimate dehydrogenase family|Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0019632|GO:0050661|GO:0055114 G3DSA:3.40.192.10|G3DSA:3.40.50.720|MF_00222|PF08501|PTHR21089|SSF51735|SSF53223|TIGR00507 B2904_RS12345 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003869|IPR016040|IPR029063 NAD(P)-binding domain|Polysaccharide biosynthesis protein, CapD-like domain|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF02719|PTHR10366|PTHR10366:SF256|SSF51735|SSF53335 B2904_RS12350 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR006439|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain GO:0008152|GO:0016787 G3DSA:3.40.50.1000|PF13419|PTHR12725|PTHR12725:SF63|SSF56784|TIGR01509 B2904_RS12355 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF02518|PR00344|PTHR24423|PTHR24423:SF520|SM00387|SM00388|SSF47384|SSF55874 B2904_RS12360 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SSF52172 B2904_RS12370 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 PF00209|PR00176|PS00610|PTHR11616|PTHR11616:SF11|SSF161070 B2904_RS12385 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 B2904_RS12390 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000914|IPR023765|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain|Solute-binding protein family 5, conserved site GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PS01040|PTHR30290|PTHR30290:SF10|SSF53850 B2904_RS12395 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011664|IPR017034 Abortive infection system protein AbiD/AbiF|Abortive infection system protein AbiD/AbiF-like PF07751|PIRSF034934 B2904_RS12400 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002818|IPR006286|IPR029062 Class I glutamine amidotransferase-like|DJ-1/PfpI|Peptidase C56, PfpI GO:0016798 G3DSA:3.40.50.880|PF01965|PTHR11019|PTHR11019:SF115|SSF52317|TIGR01382 B2904_RS12405 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005843|IPR005844|IPR005845|IPR005846|IPR016055|IPR016066 Alpha-D-phosphohexomutase, C-terminal|Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III|Alpha-D-phosphohexomutase, alpha/beta/alpha domain I|Alpha-D-phosphohexomutase, alpha/beta/alpha domain II|Alpha-D-phosphohexomutase, alpha/beta/alpha domain III|Alpha-D-phosphohexomutase, conserved site GO:0000287|GO:0005975|GO:0016868|GO:0071704 G3DSA:3.30.310.50|G3DSA:3.40.120.10|PF00408|PF02878|PF02879|PF02880|PS00710|PTHR22573|PTHR22573:SF54|SSF53738|SSF55957 B2904_RS12410 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR026906|IPR032675 Leucine rich repeat 5|Leucine-rich repeat domain, L domain-like G3DSA:3.80.10.10|PF13306|PTHR11017|SSF52058 B2904_RS12415 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000748|IPR002942|IPR006145|IPR018496|IPR020103 Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, RsuA/RluB/E/F|Pseudouridine synthase, RsuA/RluB/E/F, conserved site|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain GO:0001522|GO:0003723|GO:0009451|GO:0009982|GO:0016866 G3DSA:3.10.290.10|PF00849|PF01479|PS01149|PTHR21600|PTHR21600:SF2|SM00363|SSF55120|SSF55174|TIGR00093 B2904_RS12420 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005632|IPR024930 Chaperone protein Skp|Skp domain GO:0051082 G3DSA:3.30.910.20|PF03938|SM00935|SSF111384 B2904_RS12425 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000184|IPR010827|IPR023707 Bacterial surface antigen (D15)|Outer membrane protein assembly factor BamA|Surface antigen variable number GO:0019867|GO:0071709 G3DSA:2.40.160.50|PF01103|PF07244|PIRSF006076|PTHR12815|PTHR12815:SF11|TIGR03303 B2904_RS12435 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001228|IPR029044 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase|Nucleotide-diphospho-sugar transferases GO:0008299|GO:0050518 G3DSA:3.90.550.10|PF01128|PTHR32125|PTHR32125:SF4|SSF53448|TIGR00453 B2904_RS12440 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|PTHR11206|PTHR11206:SF132 B2904_RS12445 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007484 Peptidase M28 G3DSA:3.40.630.10|PF04389|PTHR12147|SSF53187 B2904_RS12450 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000319|IPR000534|IPR005986|IPR012080|IPR012280|IPR016040 Aspartate-semialdehyde dehydrogenase|Aspartate-semialdehyde dehydrogenase, beta-type|Aspartate-semialdehyde dehydrogenase, conserved site|NAD(P)-binding domain|Semialdehyde dehydrogenase, NAD-binding|Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0004073|GO:0005737|GO:0006520|GO:0008652|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0016620|GO:0046983|GO:0050661|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_02121|PF01118|PF02774|PIRSF000148|PS01103|PTHR10174|PTHR10174:SF2|SM00859|SSF51735|SSF55347|TIGR01296 B2904_RS12455 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 B2904_RS12460 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007035|IPR027476 D-aminopeptidase, N-terminal|Peptidase M55, D-aminopeptidase G3DSA:3.30.1360.130|G3DSA:3.40.50.10780|PF04951|PIRSF015853|SSF63992 B2904_RS12465 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 B2904_RS12475 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR024983|IPR029030 CHAT domain|Caspase-like domain PF12770|SSF52129 B2904_RS12480 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002477|IPR002502 N-acetylmuramoyl-L-alanine amidase domain|Peptidoglycan binding-like GO:0008745|GO:0009253 G3DSA:3.40.80.10|PF01510|PTHR30417|SM00644|SSF47090|SSF55846 B2904_RS12485 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000878|IPR008189|IPR014776|IPR014777 Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2|rRNA small subunit methyltransferase I GO:0008152|GO:0008168 G3DSA:3.30.950.10|G3DSA:3.40.1010.10|PF00590|PIRSF005917|PTHR21091|PTHR21091:SF18|SSF53790 B2904_RS12490 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003607|IPR006674|IPR006675 HD domain|HD/PDEase domain|HDIG domain G3DSA:1.10.3210.10|PF01966|SM00471|SSF109604|TIGR00277 B2904_RS12495 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002110|IPR020683 Ankyrin repeat|Ankyrin repeat-containing domain GO:0005515 G3DSA:1.25.40.20|PF00023|PF12796|PF13606|PF13637|PF13857|PR01415|PTHR24123|SM00248|SSF48403 B2904_RS12515 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|PTHR22911|PTHR22911:SF6|SSF103481 B2904_RS12520 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13176|PF13181|SM00028|SSF48452 B2904_RS12530 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003781|IPR009718|IPR011991|IPR016040|IPR022876 CoA-binding|NAD(P)-binding domain|Redox-sensing transcriptional repressor Rex|Rex DNA-binding, C-terminal domain|Winged helix-turn-helix DNA-binding domain GO:0005737|GO:0045892|GO:0048037|GO:0051775 G3DSA:1.10.10.10|G3DSA:3.40.50.720|MF_01131|PF02629|PF06971|PTHR35786|PTHR35786:SF1|SM00881|SSF46785|SSF51735 B2904_RS12535 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003000|IPR026591|IPR029035 DHS-like NAD/FAD-binding domain|Sirtuin family|Sirtuin family, catalytic core small domain GO:0070403 G3DSA:3.30.1600.10|G3DSA:3.40.50.1220|PF02146|PTHR11085|SSF52467 B2904_RS12540 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|SSF52499 B2904_RS12550 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR007527 Zinc finger, SWIM-type GO:0008270 PF04434 B2904_RS12555 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001539 Peptidase U32 GO:0006508|GO:0008233 PF01136|PS01276|PTHR30217|PTHR30217:SF6 B2904_RS12560 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005227|IPR006641|IPR012337 Putative pre-16S rRNA nuclease|Ribonuclease H-like domain|YqgF/RNase H-like domain GO:0003676|GO:0006139|GO:0006364 G3DSA:3.30.420.140|PF03652|PTHR33317|SSF53098|TIGR00250 B2904_RS12565 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR010106 Conserved hypothetical protein CHP01784 PF12784|PTHR41317|PTHR41317:SF1|TIGR01784 B2904_RS12570 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002176|IPR012337 Crossover junction endodeoxyribonuclease RuvC|Ribonuclease H-like domain GO:0003676|GO:0004520|GO:0006281|GO:0006310 G3DSA:3.30.420.10|MF_00034|PF02075|PR00696|PTHR30194|SSF53098|TIGR00228 B2904_RS12575 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR002876|IPR017856|IPR026563|IPR026564|IPR029072 Integrase, N-terminal zinc-binding domain-like|Transcriptional regulator TACO1-like|Transcriptional regulator TACO1-like, domain 2|Transcriptional regulator TACO1-like, domain 3|YebC-like G3DSA:1.10.10.200|G3DSA:3.30.1270.10|G3DSA:3.30.70.980|MF_00693|PF01709|PTHR12532|PTHR12532:SF0|SSF75625|TIGR01033 B2904_RS12585 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001029|IPR001492 Flagellin|Flagellin, D0/D1 domain GO:0005198|GO:0009420|GO:0071973 G3DSA:1.20.1330.10|PF00669|PF00700|PR00207|PTHR30244|PTHR30244:SF1|SSF64518 B2904_RS12590 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR004733|IPR010918|IPR016188 AIR synthase-related protein, C-terminal domain|Phosphoribosylformylglycinamidine cyclo-ligase|PurM-like, N-terminal domain GO:0004641|GO:0005737|GO:0006189 G3DSA:3.30.1330.10|G3DSA:3.90.650.10|MF_00741|PF00586|PF02769|PTHR10520|SSF55326|SSF56042|TIGR00878 B2904_RS12595 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001555|IPR002376|IPR004607 Formyl transferase, N-terminal|Phosphoribosylglycinamide formyltransferase|Phosphoribosylglycinamide formyltransferase, active site GO:0004644|GO:0006189|GO:0009058|GO:0016742 G3DSA:3.40.50.170|MF_01930|PF00551|PS00373|PTHR10520|PTHR10520:SF9|SSF53328|TIGR00639 B2904_RS12600 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 G3DSA:1.10.1530.10|G3DSA:3.30.1370.60|PF02615|PTHR11091|PTHR11091:SF0|SSF89733 B2904_RS12620 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR32196|PTHR32196:SF21 B2904_RS12625 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF416|SM00382|SSF52540 B2904_RS12630 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR025997|IPR028082 Periplasmic binding protein|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13407|PTHR32196|PTHR32196:SF9|SSF53822 B2904_RS12635 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000600|IPR011991 ROK family|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|G3DSA:3.30.420.40|PF00480|PTHR18964|PTHR18964:SF123|SSF46785|SSF53067 B2904_RS12640 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 B2904_RS12705 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic G3DSA:1.20.1170.10 B2904_RS12710 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000726|IPR023346 Glycoside hydrolase, family 19, catalytic|Lysozyme-like domain GO:0004568|GO:0006032|GO:0016998 G3DSA:3.30.20.10|PF00182|PTHR34408|SSF53955 B2904_RS12735 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001091|IPR002052|IPR002941|IPR029063 DNA methylase N-4/N-6|DNA methylase, N-6 adenine-specific, conserved site|Restriction/modification DNA-methylase|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0003677|GO:0006306|GO:0008168|GO:0008170|GO:0032259 G3DSA:3.40.50.150|PF01555|PR00508|PS00092|PTHR13370|PTHR13370:SF8|SSF53335 B2904_RS12775 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011991 Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF13730 B2904_RS12780 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR026906|IPR032675 Leucine rich repeat 5|Leucine-rich repeat domain, L domain-like G3DSA:3.80.10.10|PF13306|PTHR11017|SSF52058 B2904_RS12785 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR026906 Leucine rich repeat 5 PF13306 B2904_RS12790 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001352|IPR012337|IPR024567 Ribonuclease H-like domain|Ribonuclease HII/HIII|Ribonuclease HII/HIII domain GO:0003676|GO:0003723|GO:0004523 G3DSA:3.30.420.10|PF01351|PTHR10954|PTHR10954:SF7|SSF53098 B2904_RS12795 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR012337|IPR024567 Ribonuclease H-like domain|Ribonuclease HII/HIII domain GO:0003676 G3DSA:3.30.420.10|PF01351|SSF53098 B2904_RS12810 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 PF01420|SSF116734 B2904_RS12815 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 B2904_RS12835 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR005122 Uracil-DNA glycosylase-like G3DSA:3.40.470.10|PF03167|SSF52141 B2904_RS12840 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 PF02092|PR01045|PTHR30075|PTHR30075:SF2 B2904_RS12845 /var/genomes/g2d_mirror/Brachyspira_pilosicoli_B2904/ASM29657v1_genomic IPR011004 Trimeric LpxA-like G3DSA:2.160.10.10|SSF51161