locus-tag class description BKD09_RS00030 PF00317 Ribonucleotide reductase, all-alpha domain BKD09_RS00030 PF02867 Ribonucleotide reductase, barrel domain BKD09_RS00030 PF03477 ATP cone domain BKD09_RS00040 PF00583 Acetyltransferase (GNAT) family BKD09_RS00055 PF13408 Recombinase zinc beta ribbon domain BKD09_RS00055 PF00239 Resolvase, N terminal domain BKD09_RS00055 PF07508 Recombinase BKD09_RS00080 PF13333 Integrase core domain BKD09_RS00080 PF00665 Integrase core domain BKD09_RS00080 PF13276 HTH-like domain BKD09_RS00105 PF01695 IstB-like ATP binding protein BKD09_RS00110 PF06100 MCRA family BKD09_RS00145 PF01522 Polysaccharide deacetylase BKD09_RS00150 PF01527 Transposase BKD09_RS00155 PF05717 IS66 Orf2 like protein BKD09_RS00160 PF00497 Bacterial extracellular solute-binding proteins, family 3 BKD09_RS00165 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS00170 PF08671 Anti-repressor SinI BKD09_RS00170 PF01381 Helix-turn-helix BKD09_RS00185 PF02534 Type IV secretory system Conjugative DNA transfer BKD09_RS00205 PF10502 Signal peptidase, peptidase S26 BKD09_RS00220 PF13614 AAA domain BKD09_RS00245 PF01381 Helix-turn-helix BKD09_RS00255 PF05284 Protein of unknown function (DUF736) BKD09_RS00270 PF00313 'Cold-shock' DNA-binding domain BKD09_RS00275 PF08241 Methyltransferase domain BKD09_RS00320 PF00929 Exonuclease BKD09_RS00320 PF08411 Exonuclease C-terminal BKD09_RS00375 PF07285 Protein of unknown function (DUF1444) BKD09_RS00395 PF04542 Sigma-70 region 2 BKD09_RS00395 PF08281 Sigma-70, region 4 BKD09_RS00410 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BKD09_RS00410 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BKD09_RS00415 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS00420 PF00005 ABC transporter BKD09_RS00430 PF02633 Creatinine amidohydrolase BKD09_RS00440 PF13505 Outer membrane protein beta-barrel domain BKD09_RS00450 PF00005 ABC transporter BKD09_RS00455 PF01595 Cyclin M transmembrane N-terminal domain BKD09_RS00455 PF03471 Transporter associated domain BKD09_RS00455 PF00571 CBS domain BKD09_RS00465 PF01645 Conserved region in glutamate synthase BKD09_RS00475 PF00175 Oxidoreductase NAD-binding domain BKD09_RS00475 PF00970 Oxidoreductase FAD-binding domain BKD09_RS00480 PF08443 RimK-like ATP-grasp domain BKD09_RS00480 PF18030 RimK PreATP-grasp domain BKD09_RS00485 PF00497 Bacterial extracellular solute-binding proteins, family 3 BKD09_RS00490 PF00375 Sodium:dicarboxylate symporter family BKD09_RS00495 PF16884 N-terminal domain of oxidoreductase BKD09_RS00495 PF00107 Zinc-binding dehydrogenase BKD09_RS00510 PF01494 FAD binding domain BKD09_RS00515 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS00515 PF00501 AMP-binding enzyme BKD09_RS00525 PF14497 Glutathione S-transferase, C-terminal domain BKD09_RS00525 PF02798 Glutathione S-transferase, N-terminal domain BKD09_RS00530 PF07883 Cupin domain BKD09_RS00540 PF00005 ABC transporter BKD09_RS00550 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BKD09_RS00550 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKD09_RS00555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS00555 PF03466 LysR substrate binding domain BKD09_RS00560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BKD09_RS00560 PF08269 Cache domain BKD09_RS00565 PF03480 Bacterial extracellular solute-binding protein, family 7 BKD09_RS00575 PF00378 Enoyl-CoA hydratase/isomerase BKD09_RS00580 PF02558 Ketopantoate reductase PanE/ApbA BKD09_RS00580 PF08546 Ketopantoate reductase PanE/ApbA C terminal BKD09_RS00590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BKD09_RS00590 PF02770 Acyl-CoA dehydrogenase, middle domain BKD09_RS00590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BKD09_RS00595 PF12833 Helix-turn-helix domain BKD09_RS00605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKD09_RS00610 PF01979 Amidohydrolase family BKD09_RS00635 PF03401 Tripartite tricarboxylate transporter family receptor BKD09_RS00645 PF03737 Aldolase/RraA BKD09_RS00650 PF00501 AMP-binding enzyme BKD09_RS00650 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS00670 PF02558 Ketopantoate reductase PanE/ApbA BKD09_RS00670 PF08546 Ketopantoate reductase PanE/ApbA C terminal BKD09_RS00680 PF04226 Transglycosylase associated protein BKD09_RS00695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BKD09_RS00695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BKD09_RS00695 PF02770 Acyl-CoA dehydrogenase, middle domain BKD09_RS00700 PF00378 Enoyl-CoA hydratase/isomerase BKD09_RS00710 PF00378 Enoyl-CoA hydratase/isomerase BKD09_RS00730 PF00034 Cytochrome c BKD09_RS00735 PF00083 Sugar (and other) transporter BKD09_RS00735 PF07690 Major Facilitator Superfamily BKD09_RS00740 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BKD09_RS00740 PF06481 COX Aromatic Rich Motif BKD09_RS00745 PF00115 Cytochrome C and Quinol oxidase polypeptide I BKD09_RS00750 PF00510 Cytochrome c oxidase subunit III BKD09_RS00755 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BKD09_RS00765 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS00765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS00770 PF00072 Response regulator receiver domain BKD09_RS00775 PF03466 LysR substrate binding domain BKD09_RS00775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS00790 PF00037 4Fe-4S binding domain BKD09_RS00790 PF11953 Domain of unknown function (DUF3470) BKD09_RS00795 PF01479 S4 domain BKD09_RS00795 PF00163 Ribosomal protein S4/S9 N-terminal domain BKD09_RS00810 PF00830 Ribosomal L28 family BKD09_RS00845 PF00091 Tubulin/FtsZ family, GTPase domain BKD09_RS00845 PF12327 FtsZ family, C-terminal domain BKD09_RS00870 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BKD09_RS00885 PF06213 Cobalamin biosynthesis protein CobT BKD09_RS00885 PF11775 Cobalamin biosynthesis protein CobT VWA domain BKD09_RS00895 PF07728 AAA domain (dynein-related subfamily) BKD09_RS00895 PF12556 Cobaltochelatase CobS subunit N terminal BKD09_RS00895 PF08406 CbbQ/NirQ/NorQ C-terminal BKD09_RS00900 PF09335 SNARE associated Golgi protein BKD09_RS00905 PF00285 Citrate synthase, C-terminal domain BKD09_RS00910 PF00285 Citrate synthase, C-terminal domain BKD09_RS00915 PF13426 PAS domain BKD09_RS00915 PF07536 HWE histidine kinase BKD09_RS00920 PF00226 DnaJ domain BKD09_RS00925 PF01722 BolA-like protein BKD09_RS00930 PF00665 Integrase core domain BKD09_RS00935 PF01595 Cyclin M transmembrane N-terminal domain BKD09_RS00935 PF03471 Transporter associated domain BKD09_RS00935 PF00571 CBS domain BKD09_RS00940 PF01761 3-dehydroquinate synthase BKD09_RS00945 PF01202 Shikimate kinase BKD09_RS00955 PF02899 Phage integrase, N-terminal SAM-like domain BKD09_RS00955 PF00589 Phage integrase family BKD09_RS00960 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BKD09_RS00965 PF03734 L,D-transpeptidase catalytic domain BKD09_RS00970 PF00005 ABC transporter BKD09_RS00975 PF08402 TOBE domain BKD09_RS00975 PF00005 ABC transporter BKD09_RS00980 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS00980 PF11862 Domain of unknown function (DUF3382) BKD09_RS00995 PF01425 Amidase BKD09_RS01000 PF13458 Periplasmic binding protein BKD09_RS01010 PF01043 SecA preprotein cross-linking domain BKD09_RS01010 PF07516 SecA Wing and Scaffold domain BKD09_RS01010 PF02810 SEC-C motif BKD09_RS01010 PF07517 SecA DEAD-like domain BKD09_RS01020 PF01960 ArgJ family BKD09_RS01025 PF00293 NUDIX domain BKD09_RS01030 PF13649 Methyltransferase domain BKD09_RS01035 PF00156 Phosphoribosyl transferase domain BKD09_RS01040 PF00462 Glutaredoxin BKD09_RS01045 PF00795 Carbon-nitrogen hydrolase BKD09_RS01060 PF01541 GIY-YIG catalytic domain BKD09_RS01075 PF01842 ACT domain BKD09_RS01075 PF13840 ACT domain BKD09_RS01075 PF00696 Amino acid kinase family BKD09_RS01080 PF02896 PEP-utilising enzyme, TIM barrel domain BKD09_RS01080 PF01590 GAF domain BKD09_RS01080 PF05524 PEP-utilising enzyme, N-terminal BKD09_RS01080 PF00391 PEP-utilising enzyme, mobile domain BKD09_RS01085 PF00472 RF-1 domain BKD09_RS01085 PF03462 PCRF domain BKD09_RS01105 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS01110 PF00005 ABC transporter BKD09_RS01110 PF12399 Branched-chain amino acid ATP-binding cassette transporter BKD09_RS01115 PF00005 ABC transporter BKD09_RS01125 PF01230 HIT domain BKD09_RS01130 PF05175 Methyltransferase small domain BKD09_RS01130 PF17827 PrmC N-terminal domain BKD09_RS01140 PF08241 Methyltransferase domain BKD09_RS01145 PF00753 Metallo-beta-lactamase superfamily BKD09_RS01145 PF16123 Hydroxyacylglutathione hydrolase C-terminus BKD09_RS01155 PF00892 EamA-like transporter family BKD09_RS01165 PF00108 Thiolase, N-terminal domain BKD09_RS01165 PF02803 Thiolase, C-terminal domain BKD09_RS01170 PF05233 PHB accumulation regulatory domain BKD09_RS01170 PF07879 PHB/PHA accumulation regulator DNA-binding domain BKD09_RS01180 PF01063 Amino-transferase class IV BKD09_RS01185 PF07859 alpha/beta hydrolase fold BKD09_RS01215 PF01037 Lrp/AsnC ligand binding domain BKD09_RS01220 PF00291 Pyridoxal-phosphate dependent enzyme BKD09_RS01225 PF00570 HRDC domain BKD09_RS01225 PF00271 Helicase conserved C-terminal domain BKD09_RS01225 PF09382 RQC domain BKD09_RS01225 PF16124 RecQ zinc-binding BKD09_RS01225 PF00270 DEAD/DEAH box helicase BKD09_RS01235 PF04204 Homoserine O-succinyltransferase BKD09_RS01240 PF01053 Cys/Met metabolism PLP-dependent enzyme BKD09_RS01245 PF01425 Amidase BKD09_RS01260 PF00248 Aldo/keto reductase family BKD09_RS01265 PF07690 Major Facilitator Superfamily BKD09_RS01270 PF03466 LysR substrate binding domain BKD09_RS01270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS01285 PF01425 Amidase BKD09_RS01300 PF00501 AMP-binding enzyme BKD09_RS01300 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS01310 PF00067 Cytochrome P450 BKD09_RS01315 PF07690 Major Facilitator Superfamily BKD09_RS01320 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BKD09_RS01335 PF00106 short chain dehydrogenase BKD09_RS01345 PF14525 AraC-binding-like domain BKD09_RS01345 PF12833 Helix-turn-helix domain BKD09_RS01365 PF11867 Domain of unknown function (DUF3387) BKD09_RS01365 PF18766 SWI2/SNF2 ATPase BKD09_RS01365 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BKD09_RS01370 PF01420 Type I restriction modification DNA specificity domain BKD09_RS01375 PF02384 N-6 DNA Methylase BKD09_RS01450 PF00982 Glycosyltransferase family 20 BKD09_RS01455 PF02358 Trehalose-phosphatase BKD09_RS01460 PF00083 Sugar (and other) transporter BKD09_RS01470 PF08269 Cache domain BKD09_RS01470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BKD09_RS01475 PF08269 Cache domain BKD09_RS01475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BKD09_RS01480 PF00111 2Fe-2S iron-sulfur cluster binding domain BKD09_RS01480 PF01799 [2Fe-2S] binding domain BKD09_RS01485 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BKD09_RS01485 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BKD09_RS01490 PF03450 CO dehydrogenase flavoprotein C-terminal domain BKD09_RS01490 PF00941 FAD binding domain in molybdopterin dehydrogenase BKD09_RS01495 PF02515 CoA-transferase family III BKD09_RS01500 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BKD09_RS01505 PF01037 Lrp/AsnC ligand binding domain BKD09_RS01510 PF06906 Protein of unknown function (DUF1272) BKD09_RS01520 PF04209 homogentisate 1,2-dioxygenase BKD09_RS01535 PF01494 FAD binding domain BKD09_RS01540 PF01047 MarR family BKD09_RS01560 PF01389 OmpA-like transmembrane domain BKD09_RS01560 PF00691 OmpA family BKD09_RS01570 PF00873 AcrB/AcrD/AcrF family BKD09_RS01575 PF00027 Cyclic nucleotide-binding domain BKD09_RS01575 PF13545 Crp-like helix-turn-helix domain BKD09_RS01585 PF00672 HAMP domain BKD09_RS01585 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS01610 PF00990 Diguanylate cyclase, GGDEF domain BKD09_RS01610 PF08447 PAS fold BKD09_RS01610 PF08448 PAS fold BKD09_RS01610 PF00563 EAL domain BKD09_RS01645 PF01165 Ribosomal protein S21 BKD09_RS01670 PF10282 Lactonase, 7-bladed beta-propeller BKD09_RS01695 PF00266 Aminotransferase class-V BKD09_RS01705 PF03062 MBOAT, membrane-bound O-acyltransferase family BKD09_RS01710 PF00326 Prolyl oligopeptidase family BKD09_RS01710 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BKD09_RS01720 PF03737 Aldolase/RraA BKD09_RS01725 PF00920 Dehydratase family BKD09_RS01730 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS01735 PF00005 ABC transporter BKD09_RS01745 PF07729 FCD domain BKD09_RS01745 PF00392 Bacterial regulatory proteins, gntR family BKD09_RS01755 PF00158 Sigma-54 interaction domain BKD09_RS01755 PF00072 Response regulator receiver domain BKD09_RS01755 PF02954 Bacterial regulatory protein, Fis family BKD09_RS01760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS01760 PF00072 Response regulator receiver domain BKD09_RS01760 PF13426 PAS domain BKD09_RS01765 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS01765 PF00072 Response regulator receiver domain BKD09_RS01775 PF00072 Response regulator receiver domain BKD09_RS01775 PF01339 CheB methylesterase BKD09_RS01785 PF01739 CheR methyltransferase, SAM binding domain BKD09_RS01785 PF03705 CheR methyltransferase, all-alpha domain BKD09_RS01790 PF00072 Response regulator receiver domain BKD09_RS01790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS01795 PF01584 CheW-like domain BKD09_RS01800 PF00072 Response regulator receiver domain BKD09_RS01800 PF01627 Hpt domain BKD09_RS01800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS01800 PF02895 Signal transducing histidine kinase, homodimeric domain BKD09_RS01800 PF01584 CheW-like domain BKD09_RS01820 PF13545 Crp-like helix-turn-helix domain BKD09_RS01820 PF00027 Cyclic nucleotide-binding domain BKD09_RS01835 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS01845 PF03707 Bacterial signalling protein N terminal repeat BKD09_RS01845 PF00563 EAL domain BKD09_RS01845 PF00990 Diguanylate cyclase, GGDEF domain BKD09_RS01850 PF00892 EamA-like transporter family BKD09_RS01855 PF00155 Aminotransferase class I and II BKD09_RS01855 PF00392 Bacterial regulatory proteins, gntR family BKD09_RS01880 PF00561 alpha/beta hydrolase fold BKD09_RS01885 PF03401 Tripartite tricarboxylate transporter family receptor BKD09_RS01890 PF01494 FAD binding domain BKD09_RS01895 PF03466 LysR substrate binding domain BKD09_RS01895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS01900 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS01905 PF00005 ABC transporter BKD09_RS01915 PF00180 Isocitrate/isopropylmalate dehydrogenase BKD09_RS01920 PF00694 Aconitase C-terminal domain BKD09_RS01925 PF00330 Aconitase family (aconitate hydratase) BKD09_RS01930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS01930 PF03466 LysR substrate binding domain BKD09_RS01935 PF07516 SecA Wing and Scaffold domain BKD09_RS01935 PF02810 SEC-C motif BKD09_RS01935 PF07517 SecA DEAD-like domain BKD09_RS01935 PF01043 SecA preprotein cross-linking domain BKD09_RS01960 PF00561 alpha/beta hydrolase fold BKD09_RS01970 PF00829 Ribosomal prokaryotic L21 protein BKD09_RS01975 PF01016 Ribosomal L27 protein BKD09_RS01980 PF13302 Acetyltransferase (GNAT) domain BKD09_RS01995 PF01018 GTP1/OBG BKD09_RS01995 PF01926 50S ribosome-binding GTPase BKD09_RS02000 PF16347 Domain of unknown function (DUF4976) BKD09_RS02000 PF00884 Sulfatase BKD09_RS02010 PF01472 PUA domain BKD09_RS02010 PF00696 Amino acid kinase family BKD09_RS02015 PF00171 Aldehyde dehydrogenase family BKD09_RS02020 PF01467 Cytidylyltransferase-like BKD09_RS02030 PF02590 Predicted SPOUT methyltransferase BKD09_RS02040 PF03572 Peptidase family S41 BKD09_RS02040 PF13180 PDZ domain BKD09_RS02050 PF00293 NUDIX domain BKD09_RS02055 PF00293 NUDIX domain BKD09_RS02060 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS02065 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BKD09_RS02070 PF02874 ATP synthase alpha/beta family, beta-barrel domain BKD09_RS02070 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BKD09_RS02075 PF00231 ATP synthase BKD09_RS02080 PF02874 ATP synthase alpha/beta family, beta-barrel domain BKD09_RS02080 PF00306 ATP synthase alpha/beta chain, C terminal domain BKD09_RS02080 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BKD09_RS02085 PF00213 ATP synthase delta (OSCP) subunit BKD09_RS02090 PF03330 Lytic transglycolase BKD09_RS02095 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BKD09_RS02095 PF00270 DEAD/DEAH box helicase BKD09_RS02095 PF17764 3′ DNA-binding domain (3′BD) BKD09_RS02095 PF18074 Primosomal protein N C-terminal domain BKD09_RS02100 PF02899 Phage integrase, N-terminal SAM-like domain BKD09_RS02100 PF00589 Phage integrase family BKD09_RS02115 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BKD09_RS02115 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKD09_RS02130 PF02817 e3 binding domain BKD09_RS02130 PF00364 Biotin-requiring enzyme BKD09_RS02130 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BKD09_RS02135 PF16870 2-oxoglutarate dehydrogenase C-terminal BKD09_RS02135 PF02779 Transketolase, pyrimidine binding domain BKD09_RS02135 PF16078 2-oxoglutarate dehydrogenase N-terminus BKD09_RS02135 PF00676 Dehydrogenase E1 component BKD09_RS02140 PF02629 CoA binding domain BKD09_RS02140 PF00549 CoA-ligase BKD09_RS02150 PF08442 ATP-grasp domain BKD09_RS02150 PF00549 CoA-ligase BKD09_RS02155 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BKD09_RS02155 PF00056 lactate/malate dehydrogenase, NAD binding domain BKD09_RS02160 PF03969 AFG1-like ATPase BKD09_RS02165 PF02834 LigT like Phosphoesterase BKD09_RS02170 PF13472 GDSL-like Lipase/Acylhydrolase family BKD09_RS02175 PF00005 ABC transporter BKD09_RS02180 PF00005 ABC transporter BKD09_RS02180 PF02687 FtsX-like permease family BKD09_RS02180 PF12704 MacB-like periplasmic core domain BKD09_RS02185 PF01027 Inhibitor of apoptosis-promoting Bax1 BKD09_RS02190 PF00665 Integrase core domain BKD09_RS02210 PF00694 Aconitase C-terminal domain BKD09_RS02210 PF00330 Aconitase family (aconitate hydratase) BKD09_RS02215 PF00005 ABC transporter BKD09_RS02220 PF03379 CcmB protein BKD09_RS02225 PF01578 Cytochrome C assembly protein BKD09_RS02230 PF04995 Heme exporter protein D (CcmD) BKD09_RS02235 PF08534 Redoxin BKD09_RS02240 PF04279 Intracellular septation protein A BKD09_RS02245 PF00448 SRP54-type protein, GTPase domain BKD09_RS02245 PF02881 SRP54-type protein, helical bundle domain BKD09_RS02250 PF00849 RNA pseudouridylate synthase BKD09_RS02260 PF04055 Radical SAM superfamily BKD09_RS02260 PF00919 Uncharacterized protein family UPF0004 BKD09_RS02265 PF01678 Diaminopimelate epimerase BKD09_RS02280 PF12706 Beta-lactamase superfamily domain BKD09_RS02285 PF02881 SRP54-type protein, helical bundle domain BKD09_RS02285 PF00448 SRP54-type protein, GTPase domain BKD09_RS02285 PF02978 Signal peptide binding domain BKD09_RS02290 PF00886 Ribosomal protein S16 BKD09_RS02295 PF05239 PRC-barrel domain BKD09_RS02295 PF01782 RimM N-terminal domain BKD09_RS02300 PF01746 tRNA (Guanine-1)-methyltransferase BKD09_RS02305 PF01245 Ribosomal protein L19 BKD09_RS02310 PF00330 Aconitase family (aconitate hydratase) BKD09_RS02355 PF00694 Aconitase C-terminal domain BKD09_RS02380 PF03328 HpcH/HpaI aldolase/citrate lyase family BKD09_RS02385 PF00484 Carbonic anhydrase BKD09_RS02390 PF02774 Semialdehyde dehydrogenase, dimerisation domain BKD09_RS02390 PF01118 Semialdehyde dehydrogenase, NAD binding domain BKD09_RS02405 PF00132 Bacterial transferase hexapeptide (six repeats) BKD09_RS02410 PF00180 Isocitrate/isopropylmalate dehydrogenase BKD09_RS02420 PF00174 Oxidoreductase molybdopterin binding domain BKD09_RS02425 PF01292 Prokaryotic cytochrome b561 BKD09_RS02430 PF02469 Fasciclin domain BKD09_RS02440 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS02440 PF00501 AMP-binding enzyme BKD09_RS02450 PF01925 Sulfite exporter TauE/SafE BKD09_RS02455 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BKD09_RS02465 PF00890 FAD binding domain BKD09_RS02465 PF02910 Fumarate reductase flavoprotein C-term BKD09_RS02470 PF13237 4Fe-4S dicluster domain BKD09_RS02470 PF13085 2Fe-2S iron-sulfur cluster binding domain BKD09_RS02475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS02475 PF13426 PAS domain BKD09_RS02475 PF00072 Response regulator receiver domain BKD09_RS02480 PF06472 ABC transporter transmembrane region 2 BKD09_RS02480 PF00005 ABC transporter BKD09_RS02520 PF00245 Alkaline phosphatase BKD09_RS02525 PF00764 Arginosuccinate synthase BKD09_RS02530 PF01569 PAP2 superfamily BKD09_RS02540 PF04055 Radical SAM superfamily BKD09_RS02555 PF08659 KR domain BKD09_RS02555 PF08240 Alcohol dehydrogenase GroES-like domain BKD09_RS02555 PF00107 Zinc-binding dehydrogenase BKD09_RS02555 PF16197 Ketoacyl-synthetase C-terminal extension BKD09_RS02555 PF02801 Beta-ketoacyl synthase, C-terminal domain BKD09_RS02555 PF00698 Acyl transferase domain BKD09_RS02555 PF00550 Phosphopantetheine attachment site BKD09_RS02555 PF14765 Polyketide synthase dehydratase BKD09_RS02555 PF00109 Beta-ketoacyl synthase, N-terminal domain BKD09_RS02575 PF01329 Pterin 4 alpha carbinolamine dehydratase BKD09_RS02590 PF00072 Response regulator receiver domain BKD09_RS02600 PF00009 Elongation factor Tu GTP binding domain BKD09_RS02600 PF03144 Elongation factor Tu domain 2 BKD09_RS02600 PF00679 Elongation factor G C-terminus BKD09_RS02605 PF01593 Flavin containing amine oxidoreductase BKD09_RS02610 PF04134 Protein of unknown function, DUF393 BKD09_RS02630 PF00583 Acetyltransferase (GNAT) family BKD09_RS02635 PF00719 Inorganic pyrophosphatase BKD09_RS02640 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BKD09_RS02640 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BKD09_RS02645 PF02594 Uncharacterised ACR, YggU family COG1872 BKD09_RS02650 PF02325 YGGT family BKD09_RS02660 PF00378 Enoyl-CoA hydratase/isomerase BKD09_RS02665 PF00117 Glutamine amidotransferase class-I BKD09_RS02670 PF00106 short chain dehydrogenase BKD09_RS02690 PF00067 Cytochrome P450 BKD09_RS02700 PF05977 Transmembrane secretion effector BKD09_RS02715 PF01522 Polysaccharide deacetylase BKD09_RS02760 PF00814 Glycoprotease family BKD09_RS02765 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BKD09_RS02765 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BKD09_RS02775 PF00672 HAMP domain BKD09_RS02775 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS02775 PF02743 Cache domain BKD09_RS02790 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS02790 PF00501 AMP-binding enzyme BKD09_RS02790 PF16177 Acetyl-coenzyme A synthetase N-terminus BKD09_RS02795 PF17969 L,D-transpeptidase C-terminal domain BKD09_RS02795 PF01476 LysM domain BKD09_RS02795 PF03734 L,D-transpeptidase catalytic domain BKD09_RS02810 PF01029 NusB family BKD09_RS02810 PF01189 16S rRNA methyltransferase RsmB/F BKD09_RS02820 PF01808 AICARFT/IMPCHase bienzyme BKD09_RS02820 PF02142 MGS-like domain BKD09_RS02835 PF07690 Major Facilitator Superfamily BKD09_RS02850 PF01554 MatE BKD09_RS02860 PF08546 Ketopantoate reductase PanE/ApbA C terminal BKD09_RS02860 PF02558 Ketopantoate reductase PanE/ApbA BKD09_RS02870 PF07995 Glucose / Sorbosone dehydrogenase BKD09_RS02875 PF16363 GDP-mannose 4,6 dehydratase BKD09_RS02885 PF00085 Thioredoxin BKD09_RS02915 PF03966 Trm112p-like protein BKD09_RS02920 PF01494 FAD binding domain BKD09_RS02935 PF00543 Nitrogen regulatory protein P-II BKD09_RS02940 PF00909 Ammonium Transporter Family BKD09_RS02945 PF01022 Bacterial regulatory protein, arsR family BKD09_RS02955 PF00574 Clp protease BKD09_RS02965 PF00543 Nitrogen regulatory protein P-II BKD09_RS02970 PF00909 Ammonium Transporter Family BKD09_RS02985 PF00155 Aminotransferase class I and II BKD09_RS02990 PF01580 FtsK/SpoIIIE family BKD09_RS02990 PF09397 Ftsk gamma domain BKD09_RS02990 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BKD09_RS02990 PF17854 FtsK alpha domain BKD09_RS02995 PF03548 Outer membrane lipoprotein carrier protein LolA BKD09_RS03010 PF00486 Transcriptional regulatory protein, C terminal BKD09_RS03010 PF00072 Response regulator receiver domain BKD09_RS03025 PF01168 Alanine racemase, N-terminal domain BKD09_RS03030 PF00990 Diguanylate cyclase, GGDEF domain BKD09_RS03030 PF01590 GAF domain BKD09_RS03030 PF00563 EAL domain BKD09_RS03030 PF00360 Phytochrome region BKD09_RS03035 PF00990 Diguanylate cyclase, GGDEF domain BKD09_RS03040 PF13603 Leucyl-tRNA synthetase, Domain 2 BKD09_RS03040 PF09334 tRNA synthetases class I (M) BKD09_RS03040 PF08264 Anticodon-binding domain of tRNA BKD09_RS03040 PF00133 tRNA synthetases class I (I, L, M and V) BKD09_RS03055 PF17762 HTH domain found in ParB protein BKD09_RS03055 PF02195 ParB-like nuclease domain BKD09_RS03060 PF13614 AAA domain BKD09_RS03065 PF02527 rRNA small subunit methyltransferase G BKD09_RS03070 PF01134 Glucose inhibited division protein A BKD09_RS03070 PF13932 GidA associated domain BKD09_RS03075 PF12631 MnmE helical domain BKD09_RS03075 PF10396 GTP-binding protein TrmE N-terminus BKD09_RS03075 PF01926 50S ribosome-binding GTPase BKD09_RS03080 PF07497 Rho termination factor, RNA-binding domain BKD09_RS03080 PF07498 Rho termination factor, N-terminal domain BKD09_RS03080 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BKD09_RS03085 PF03653 Uncharacterised protein family (UPF0093) BKD09_RS03095 PF03618 Kinase/pyrophosphorylase BKD09_RS03100 PF02545 Maf-like protein BKD09_RS03105 PF01121 Dephospho-CoA kinase BKD09_RS03110 PF00929 Exonuclease BKD09_RS03115 PF02556 Preprotein translocase subunit SecB BKD09_RS03125 PF03562 MltA specific insert domain BKD09_RS03125 PF06725 3D domain BKD09_RS03140 PF00004 ATPase family associated with various cellular activities (AAA) BKD09_RS03140 PF07724 AAA domain (Cdc48 subfamily) BKD09_RS03140 PF10431 C-terminal, D2-small domain, of ClpB protein BKD09_RS03145 PF10755 Protein of unknown function (DUF2585) BKD09_RS03155 PF00227 Proteasome subunit BKD09_RS03160 PF00475 Imidazoleglycerol-phosphate dehydratase BKD09_RS03170 PF00117 Glutamine amidotransferase class-I BKD09_RS03175 PF00977 Histidine biosynthesis protein BKD09_RS03180 PF00977 Histidine biosynthesis protein BKD09_RS03185 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BKD09_RS03190 PF00485 Phosphoribulokinase / Uridine kinase family BKD09_RS03195 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS03195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS03195 PF00672 HAMP domain BKD09_RS03195 PF01627 Hpt domain BKD09_RS03195 PF00072 Response regulator receiver domain BKD09_RS03195 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BKD09_RS03205 PF13335 Magnesium chelatase, subunit ChlI C-terminal BKD09_RS03205 PF01078 Magnesium chelatase, subunit ChlI BKD09_RS03230 PF04972 BON domain BKD09_RS03230 PF00263 Bacterial type II and III secretion system protein BKD09_RS03230 PF13629 Pilus formation protein N terminal region BKD09_RS03240 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BKD09_RS03240 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BKD09_RS03245 PF02021 Uncharacterised protein family UPF0102 BKD09_RS03250 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BKD09_RS03260 PF06969 HemN C-terminal domain BKD09_RS03260 PF04055 Radical SAM superfamily BKD09_RS03265 PF01725 Ham1 family BKD09_RS03270 PF03725 3' exoribonuclease family, domain 2 BKD09_RS03270 PF01138 3' exoribonuclease family, domain 1 BKD09_RS03275 PF01628 HrcA protein C terminal domain BKD09_RS03280 PF01025 GrpE BKD09_RS03285 PF00857 Isochorismatase family BKD09_RS03295 PF00012 Hsp70 protein BKD09_RS03300 PF00684 DnaJ central domain BKD09_RS03300 PF01556 DnaJ C terminal domain BKD09_RS03300 PF00226 DnaJ domain BKD09_RS03305 PF13649 Methyltransferase domain BKD09_RS03310 PF03358 NADPH-dependent FMN reductase BKD09_RS03315 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BKD09_RS03330 PF00005 ABC transporter BKD09_RS03330 PF00664 ABC transporter transmembrane region BKD09_RS03335 PF00529 HlyD membrane-fusion protein of T1SS BKD09_RS03335 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BKD09_RS03350 PF05173 Dihydrodipicolinate reductase, C-terminus BKD09_RS03350 PF01113 Dihydrodipicolinate reductase, N-terminus BKD09_RS03355 PF00300 Histidine phosphatase superfamily (branch 1) BKD09_RS03360 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BKD09_RS03360 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BKD09_RS03370 PF00730 HhH-GPD superfamily base excision DNA repair protein BKD09_RS03375 PF13533 Biotin-lipoyl like BKD09_RS03390 PF00082 Subtilase family BKD09_RS03405 PF01402 Ribbon-helix-helix protein, copG family BKD09_RS03405 PF08753 NikR C terminal nickel binding domain BKD09_RS03410 PF04945 YHS domain BKD09_RS03415 PF02583 Metal-sensitive transcriptional repressor BKD09_RS03425 PF01593 Flavin containing amine oxidoreductase BKD09_RS03435 PF03483 B3/4 domain BKD09_RS03435 PF03484 tRNA synthetase B5 domain BKD09_RS03435 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BKD09_RS03435 PF03147 Ferredoxin-fold anticodon binding domain BKD09_RS03435 PF01588 Putative tRNA binding domain BKD09_RS03440 PF01409 tRNA synthetases class II core domain (F) BKD09_RS03440 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BKD09_RS03450 PF00453 Ribosomal protein L20 BKD09_RS03455 PF01632 Ribosomal protein L35 BKD09_RS03465 PF05198 Translation initiation factor IF-3, N-terminal domain BKD09_RS03465 PF00707 Translation initiation factor IF-3, C-terminal domain BKD09_RS03490 PF08331 Domain of unknown function (DUF1730) BKD09_RS03495 PF00043 Glutathione S-transferase, C-terminal domain BKD09_RS03495 PF13417 Glutathione S-transferase, N-terminal domain BKD09_RS03500 PF02673 Bacitracin resistance protein BacA BKD09_RS03505 PF04030 D-arabinono-1,4-lactone oxidase BKD09_RS03505 PF01565 FAD binding domain BKD09_RS03515 PF13460 NAD(P)H-binding BKD09_RS03515 PF11066 Protein of unknown function (DUF2867) BKD09_RS03530 PF00593 TonB dependent receptor BKD09_RS03530 PF07715 TonB-dependent Receptor Plug Domain BKD09_RS03535 PF01568 Molydopterin dinucleotide binding domain BKD09_RS03535 PF00384 Molybdopterin oxidoreductase BKD09_RS03535 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BKD09_RS03540 PF13247 4Fe-4S dicluster domain BKD09_RS03545 PF01292 Prokaryotic cytochrome b561 BKD09_RS03575 PF00672 HAMP domain BKD09_RS03575 PF13426 PAS domain BKD09_RS03575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS03575 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS03580 PF00072 Response regulator receiver domain BKD09_RS03580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS03580 PF13426 PAS domain BKD09_RS03585 PF07690 Major Facilitator Superfamily BKD09_RS03590 PF01040 UbiA prenyltransferase family BKD09_RS03595 PF00570 HRDC domain BKD09_RS03595 PF01612 3'-5' exonuclease BKD09_RS03605 PF03968 OstA-like protein BKD09_RS03610 PF00005 ABC transporter BKD09_RS03615 PF04552 Sigma-54, DNA binding domain BKD09_RS03615 PF04963 Sigma-54 factor, core binding domain BKD09_RS03615 PF00309 Sigma-54 factor, Activator interacting domain (AID) BKD09_RS03620 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus BKD09_RS03620 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BKD09_RS03625 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BKD09_RS03650 PF03435 Saccharopine dehydrogenase NADP binding domain BKD09_RS03655 PF00501 AMP-binding enzyme BKD09_RS03655 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS03675 PF00011 Hsp20/alpha crystallin family BKD09_RS03680 PF00005 ABC transporter BKD09_RS03685 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS03690 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS03695 PF13416 Bacterial extracellular solute-binding protein BKD09_RS03700 PF02515 CoA-transferase family III BKD09_RS03705 PF02566 OsmC-like protein BKD09_RS03710 PF01047 MarR family BKD09_RS03715 PF01541 GIY-YIG catalytic domain BKD09_RS03730 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BKD09_RS03735 PF02224 Cytidylate kinase BKD09_RS03740 PF00575 S1 RNA binding domain BKD09_RS03745 PF01343 Peptidase family S49 BKD09_RS03750 PF00216 Bacterial DNA-binding protein BKD09_RS03760 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BKD09_RS03765 PF00291 Pyridoxal-phosphate dependent enzyme BKD09_RS03770 PF00290 Tryptophan synthase alpha chain BKD09_RS03775 PF01039 Carboxyl transferase domain BKD09_RS03780 PF08245 Mur ligase middle domain BKD09_RS03780 PF02875 Mur ligase family, glutamate ligase domain BKD09_RS03795 PF00085 Thioredoxin BKD09_RS03800 PF13361 UvrD-like helicase C-terminal domain BKD09_RS03800 PF00580 UvrD/REP helicase N-terminal domain BKD09_RS03800 PF12705 PD-(D/E)XK nuclease superfamily BKD09_RS03810 PF12804 MobA-like NTP transferase domain BKD09_RS03820 PF01636 Phosphotransferase enzyme family BKD09_RS03825 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS03825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS03830 PF00692 dUTPase BKD09_RS03835 PF04127 DNA / pantothenate metabolism flavoprotein BKD09_RS03835 PF02441 Flavoprotein BKD09_RS03840 PF03109 ABC1 family BKD09_RS03845 PF01209 ubiE/COQ5 methyltransferase family BKD09_RS03850 PF06827 Zinc finger found in FPG and IleRS BKD09_RS03850 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BKD09_RS03850 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BKD09_RS03870 PF13581 Histidine kinase-like ATPase domain BKD09_RS03870 PF07536 HWE histidine kinase BKD09_RS03870 PF13426 PAS domain BKD09_RS03880 PF00899 ThiF family BKD09_RS03885 PF00248 Aldo/keto reductase family BKD09_RS03890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS03890 PF03466 LysR substrate binding domain BKD09_RS03895 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BKD09_RS03895 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BKD09_RS03905 PF01475 Ferric uptake regulator family BKD09_RS03910 PF07977 FabA-like domain BKD09_RS03915 PF00109 Beta-ketoacyl synthase, N-terminal domain BKD09_RS03915 PF02801 Beta-ketoacyl synthase, C-terminal domain BKD09_RS03925 PF02798 Glutathione S-transferase, N-terminal domain BKD09_RS03925 PF00043 Glutathione S-transferase, C-terminal domain BKD09_RS03945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS03945 PF03466 LysR substrate binding domain BKD09_RS03950 PF00141 Peroxidase BKD09_RS03955 PF03725 3' exoribonuclease family, domain 2 BKD09_RS03955 PF00575 S1 RNA binding domain BKD09_RS03955 PF00013 KH domain BKD09_RS03955 PF01138 3' exoribonuclease family, domain 1 BKD09_RS03955 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BKD09_RS03960 PF00312 Ribosomal protein S15 BKD09_RS03965 PF09157 Pseudouridine synthase II TruB, C-terminal BKD09_RS03965 PF16198 tRNA pseudouridylate synthase B C-terminal domain BKD09_RS03965 PF01509 TruB family pseudouridylate synthase (N terminal domain) BKD09_RS03970 PF02033 Ribosome-binding factor A BKD09_RS03975 PF04760 Translation initiation factor IF-2, N-terminal region BKD09_RS03975 PF08364 Bacterial translation initiation factor IF-2 associated region BKD09_RS03975 PF00009 Elongation factor Tu GTP binding domain BKD09_RS03975 PF11987 Translation-initiation factor 2 BKD09_RS03975 PF03144 Elongation factor Tu domain 2 BKD09_RS03985 PF00575 S1 RNA binding domain BKD09_RS03985 PF08529 NusA N-terminal domain BKD09_RS03985 PF13184 NusA-like KH domain BKD09_RS03990 PF02576 RimP N-terminal domain BKD09_RS03990 PF17384 RimP C-terminal SH3 domain BKD09_RS04000 PF02390 Putative methyltransferase BKD09_RS04010 PF01381 Helix-turn-helix BKD09_RS04015 PF00795 Carbon-nitrogen hydrolase BKD09_RS04020 PF03471 Transporter associated domain BKD09_RS04020 PF00571 CBS domain BKD09_RS04025 PF02130 Uncharacterized protein family UPF0054 BKD09_RS04030 PF02562 PhoH-like protein BKD09_RS04035 PF00919 Uncharacterized protein family UPF0004 BKD09_RS04035 PF04055 Radical SAM superfamily BKD09_RS04035 PF01938 TRAM domain BKD09_RS04040 PF13419 Haloacid dehalogenase-like hydrolase BKD09_RS04045 PF01475 Ferric uptake regulator family BKD09_RS04055 PF00814 Glycoprotease family BKD09_RS04060 PF13426 PAS domain BKD09_RS04060 PF08447 PAS fold BKD09_RS04060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BKD09_RS04075 PF00579 tRNA synthetases class I (W and Y) BKD09_RS04080 PF03023 Lipid II flippase MurJ BKD09_RS04085 PF00294 pfkB family carbohydrate kinase BKD09_RS04090 PF00501 AMP-binding enzyme BKD09_RS04090 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS04095 PF00144 Beta-lactamase BKD09_RS04105 PF00171 Aldehyde dehydrogenase family BKD09_RS04110 PF12833 Helix-turn-helix domain BKD09_RS04130 PF01259 SAICAR synthetase BKD09_RS04135 PF05726 Pirin C-terminal cupin domain BKD09_RS04135 PF02678 Pirin BKD09_RS04170 PF01323 DSBA-like thioredoxin domain BKD09_RS04175 PF01554 MatE BKD09_RS04180 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BKD09_RS04190 PF01751 Toprim domain BKD09_RS04190 PF00986 DNA gyrase B subunit, carboxyl terminus BKD09_RS04190 PF00204 DNA gyrase B BKD09_RS04190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS04200 PF00884 Sulfatase BKD09_RS04215 PF02463 RecF/RecN/SMC N terminal domain BKD09_RS04220 PF00712 DNA polymerase III beta subunit, N-terminal domain BKD09_RS04220 PF02768 DNA polymerase III beta subunit, C-terminal domain BKD09_RS04220 PF02767 DNA polymerase III beta subunit, central domain BKD09_RS04225 PF00308 Bacterial dnaA protein BKD09_RS04225 PF08299 Bacterial dnaA protein helix-turn-helix BKD09_RS04225 PF11638 DnaA N-terminal domain BKD09_RS04230 PF01649 Ribosomal protein S20 BKD09_RS04240 PF01625 Peptide methionine sulfoxide reductase BKD09_RS04255 PF01738 Dienelactone hydrolase family BKD09_RS04265 PF00561 alpha/beta hydrolase fold BKD09_RS04270 PF01799 [2Fe-2S] binding domain BKD09_RS04270 PF00111 2Fe-2S iron-sulfur cluster binding domain BKD09_RS04275 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BKD09_RS04280 PF11871 Domain of unknown function (DUF3391) BKD09_RS04280 PF01966 HD domain BKD09_RS04285 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS04285 PF00501 AMP-binding enzyme BKD09_RS04290 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BKD09_RS04295 PF03401 Tripartite tricarboxylate transporter family receptor BKD09_RS04340 PF01255 Putative undecaprenyl diphosphate synthase BKD09_RS04375 PF11798 IMS family HHH motif BKD09_RS04375 PF11799 impB/mucB/samB family C-terminal domain BKD09_RS04375 PF00817 impB/mucB/samB family BKD09_RS04400 PF00149 Calcineurin-like phosphoesterase BKD09_RS04420 PF00990 Diguanylate cyclase, GGDEF domain BKD09_RS04420 PF17158 Membrane-associated sensor, integral membrane domain BKD09_RS04425 PF08448 PAS fold BKD09_RS04425 PF08447 PAS fold BKD09_RS04425 PF00990 Diguanylate cyclase, GGDEF domain BKD09_RS04425 PF00563 EAL domain BKD09_RS04440 PF00005 ABC transporter BKD09_RS04445 PF00005 ABC transporter BKD09_RS04445 PF12399 Branched-chain amino acid ATP-binding cassette transporter BKD09_RS04455 PF00158 Sigma-54 interaction domain BKD09_RS04455 PF00989 PAS fold BKD09_RS04455 PF02954 Bacterial regulatory protein, Fis family BKD09_RS04460 PF13426 PAS domain BKD09_RS04460 PF00990 Diguanylate cyclase, GGDEF domain BKD09_RS04460 PF00563 EAL domain BKD09_RS04475 PF00067 Cytochrome P450 BKD09_RS04480 PF00296 Luciferase-like monooxygenase BKD09_RS04485 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BKD09_RS04485 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKD09_RS04490 PF07690 Major Facilitator Superfamily BKD09_RS04495 PF10503 Esterase PHB depolymerase BKD09_RS04505 PF01638 HxlR-like helix-turn-helix BKD09_RS04510 PF00753 Metallo-beta-lactamase superfamily BKD09_RS04515 PF00128 Alpha amylase, catalytic domain BKD09_RS04525 PF00072 Response regulator receiver domain BKD09_RS04530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS04530 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS04535 PF00005 ABC transporter BKD09_RS04560 PF00905 Penicillin binding protein transpeptidase domain BKD09_RS04560 PF00912 Transglycosylase BKD09_RS04570 PF13458 Periplasmic binding protein BKD09_RS04585 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BKD09_RS04585 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BKD09_RS04590 PF08335 GlnD PII-uridylyltransferase BKD09_RS04590 PF01909 Nucleotidyltransferase domain BKD09_RS04590 PF01842 ACT domain BKD09_RS04590 PF01966 HD domain BKD09_RS04600 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS04605 PF00005 ABC transporter BKD09_RS04625 PF13426 PAS domain BKD09_RS04625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BKD09_RS04625 PF08447 PAS fold BKD09_RS04630 PF05188 MutS domain II BKD09_RS04630 PF00488 MutS domain V BKD09_RS04630 PF05192 MutS domain III BKD09_RS04630 PF01624 MutS domain I BKD09_RS04630 PF05190 MutS family domain IV BKD09_RS04635 PF00108 Thiolase, N-terminal domain BKD09_RS04635 PF02803 Thiolase, C-terminal domain BKD09_RS04640 PF00775 Dioxygenase BKD09_RS04640 PF04444 Catechol dioxygenase N terminus BKD09_RS04645 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal BKD09_RS04645 PF00775 Dioxygenase BKD09_RS04655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BKD09_RS04655 PF00672 HAMP domain BKD09_RS04665 PF07690 Major Facilitator Superfamily BKD09_RS04670 PF13533 Biotin-lipoyl like BKD09_RS04680 PF01475 Ferric uptake regulator family BKD09_RS04690 PF04551 GcpE protein BKD09_RS04695 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BKD09_RS04700 PF03781 Sulfatase-modifying factor enzyme 1 BKD09_RS04700 PF00069 Protein kinase domain BKD09_RS04715 PF00999 Sodium/hydrogen exchanger family BKD09_RS04745 PF00348 Polyprenyl synthetase BKD09_RS04750 PF00912 Transglycosylase BKD09_RS04755 PF01783 Ribosomal L32p protein family BKD09_RS04770 PF00563 EAL domain BKD09_RS04770 PF00990 Diguanylate cyclase, GGDEF domain BKD09_RS04770 PF03707 Bacterial signalling protein N terminal repeat BKD09_RS04770 PF13188 PAS domain BKD09_RS04790 PF08448 PAS fold BKD09_RS04790 PF08447 PAS fold BKD09_RS04790 PF00990 Diguanylate cyclase, GGDEF domain BKD09_RS04790 PF00563 EAL domain BKD09_RS04805 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BKD09_RS04805 PF02770 Acyl-CoA dehydrogenase, middle domain BKD09_RS04805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BKD09_RS04810 PF00550 Phosphopantetheine attachment site BKD09_RS04815 PF01048 Phosphorylase superfamily BKD09_RS04820 PF01008 Initiation factor 2 subunit family BKD09_RS04825 PF13419 Haloacid dehalogenase-like hydrolase BKD09_RS04835 PF00743 Flavin-binding monooxygenase-like BKD09_RS04840 PF00486 Transcriptional regulatory protein, C terminal BKD09_RS04840 PF00072 Response regulator receiver domain BKD09_RS04845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS04845 PF00989 PAS fold BKD09_RS04845 PF01627 Hpt domain BKD09_RS04845 PF18415 Histidine kinase receptor ArcB trans-membrane domain BKD09_RS04845 PF00072 Response regulator receiver domain BKD09_RS04845 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS04850 PF13458 Periplasmic binding protein BKD09_RS04860 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS04865 PF00005 ABC transporter BKD09_RS04870 PF00005 ABC transporter BKD09_RS04875 PF03069 Acetamidase/Formamidase family BKD09_RS04885 PF00795 Carbon-nitrogen hydrolase BKD09_RS04900 PF13607 Succinyl-CoA ligase like flavodoxin domain BKD09_RS04900 PF13380 CoA binding domain BKD09_RS04935 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS04935 PF00501 AMP-binding enzyme BKD09_RS04940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BKD09_RS04940 PF02770 Acyl-CoA dehydrogenase, middle domain BKD09_RS04940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BKD09_RS04945 PF02770 Acyl-CoA dehydrogenase, middle domain BKD09_RS04945 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BKD09_RS04945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BKD09_RS04960 PF05853 beta-keto acid cleavage enzyme BKD09_RS04965 PF01039 Carboxyl transferase domain BKD09_RS04970 PF00364 Biotin-requiring enzyme BKD09_RS04970 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BKD09_RS04970 PF00289 Biotin carboxylase, N-terminal domain BKD09_RS04970 PF02785 Biotin carboxylase C-terminal domain BKD09_RS04980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKD09_RS04980 PF00005 ABC transporter BKD09_RS04985 PF00005 ABC transporter BKD09_RS04985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKD09_RS04990 PF12911 N-terminal TM domain of oligopeptide transport permease C BKD09_RS04990 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS04995 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS05000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKD09_RS05005 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS05005 PF00501 AMP-binding enzyme BKD09_RS05010 PF00465 Iron-containing alcohol dehydrogenase BKD09_RS05015 PF00529 HlyD membrane-fusion protein of T1SS BKD09_RS05015 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BKD09_RS05020 PF00873 AcrB/AcrD/AcrF family BKD09_RS05025 PF13458 Periplasmic binding protein BKD09_RS05030 PF01124 MAPEG family BKD09_RS05045 PF00005 ABC transporter BKD09_RS05050 PF07690 Major Facilitator Superfamily BKD09_RS05055 PF07969 Amidohydrolase family BKD09_RS05060 PF07690 Major Facilitator Superfamily BKD09_RS05065 PF00753 Metallo-beta-lactamase superfamily BKD09_RS05065 PF04273 Putative phosphatase (DUF442) BKD09_RS05075 PF00149 Calcineurin-like phosphoesterase BKD09_RS05075 PF02872 5'-nucleotidase, C-terminal domain BKD09_RS05110 PF00326 Prolyl oligopeptidase family BKD09_RS05110 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BKD09_RS05115 PF07690 Major Facilitator Superfamily BKD09_RS05125 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BKD09_RS05135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BKD09_RS05135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BKD09_RS05135 PF02770 Acyl-CoA dehydrogenase, middle domain BKD09_RS05140 PF02770 Acyl-CoA dehydrogenase, middle domain BKD09_RS05140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BKD09_RS05140 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BKD09_RS05145 PF00497 Bacterial extracellular solute-binding proteins, family 3 BKD09_RS05160 PF17991 Thioredoxin like C-terminal domain BKD09_RS05160 PF02683 Cytochrome C biogenesis protein transmembrane region BKD09_RS05160 PF00578 AhpC/TSA family BKD09_RS05165 PF00578 AhpC/TSA family BKD09_RS05165 PF02683 Cytochrome C biogenesis protein transmembrane region BKD09_RS05165 PF17991 Thioredoxin like C-terminal domain BKD09_RS05175 PF04542 Sigma-70 region 2 BKD09_RS05175 PF04545 Sigma-70, region 4 BKD09_RS05180 PF00486 Transcriptional regulatory protein, C terminal BKD09_RS05180 PF00072 Response regulator receiver domain BKD09_RS05185 PF11849 Domain of unknown function (DUF3369) BKD09_RS05190 PF00497 Bacterial extracellular solute-binding proteins, family 3 BKD09_RS05190 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS05190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS05195 PF03480 Bacterial extracellular solute-binding protein, family 7 BKD09_RS05200 PF13416 Bacterial extracellular solute-binding protein BKD09_RS05205 PF01636 Phosphotransferase enzyme family BKD09_RS05210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKD09_RS05215 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS05220 PF12911 N-terminal TM domain of oligopeptide transport permease C BKD09_RS05220 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS05225 PF00005 ABC transporter BKD09_RS05225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKD09_RS05235 PF01425 Amidase BKD09_RS05245 PF07729 FCD domain BKD09_RS05245 PF00392 Bacterial regulatory proteins, gntR family BKD09_RS05250 PF01425 Amidase BKD09_RS05260 PF07993 Male sterility protein BKD09_RS05260 PF00501 AMP-binding enzyme BKD09_RS05260 PF00550 Phosphopantetheine attachment site BKD09_RS05270 PF00067 Cytochrome P450 BKD09_RS05275 PF00111 2Fe-2S iron-sulfur cluster binding domain BKD09_RS05285 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKD09_RS05295 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BKD09_RS05295 PF01261 Xylose isomerase-like TIM barrel BKD09_RS05300 PF00005 ABC transporter BKD09_RS05305 PF12399 Branched-chain amino acid ATP-binding cassette transporter BKD09_RS05305 PF00005 ABC transporter BKD09_RS05310 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS05310 PF11862 Domain of unknown function (DUF3382) BKD09_RS05315 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS05320 PF13458 Periplasmic binding protein BKD09_RS05325 PF08501 Shikimate dehydrogenase substrate binding domain BKD09_RS05325 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BKD09_RS05330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS05330 PF03466 LysR substrate binding domain BKD09_RS05340 PF03472 Autoinducer binding domain BKD09_RS05340 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS05345 PF00765 Autoinducer synthase BKD09_RS05355 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS05365 PF12399 Branched-chain amino acid ATP-binding cassette transporter BKD09_RS05365 PF00005 ABC transporter BKD09_RS05370 PF00005 ABC transporter BKD09_RS05375 PF14525 AraC-binding-like domain BKD09_RS05375 PF12833 Helix-turn-helix domain BKD09_RS05380 PF00593 TonB dependent receptor BKD09_RS05380 PF07715 TonB-dependent Receptor Plug Domain BKD09_RS05385 PF00120 Glutamine synthetase, catalytic domain BKD09_RS05390 PF00355 Rieske [2Fe-2S] domain BKD09_RS05395 PF09339 IclR helix-turn-helix domain BKD09_RS05395 PF01614 Bacterial transcriptional regulator BKD09_RS05405 PF02254 TrkA-N domain BKD09_RS05405 PF00999 Sodium/hydrogen exchanger family BKD09_RS05415 PF01152 Bacterial-like globin BKD09_RS05420 PF01202 Shikimate kinase BKD09_RS05425 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS05425 PF00501 AMP-binding enzyme BKD09_RS05440 PF00378 Enoyl-CoA hydratase/isomerase BKD09_RS05460 PF01389 OmpA-like transmembrane domain BKD09_RS05460 PF00691 OmpA family BKD09_RS05470 PF16925 Tetracyclin repressor-like, C-terminal domain BKD09_RS05470 PF00440 Bacterial regulatory proteins, tetR family BKD09_RS05475 PF00561 alpha/beta hydrolase fold BKD09_RS05490 PF00989 PAS fold BKD09_RS05490 PF16736 Single Cache-like BKD09_RS05490 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS05490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS05495 PF12849 PBP superfamily domain BKD09_RS05500 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS05505 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS05510 PF00005 ABC transporter BKD09_RS05515 PF01895 PhoU domain BKD09_RS05520 PF00486 Transcriptional regulatory protein, C terminal BKD09_RS05520 PF00072 Response regulator receiver domain BKD09_RS05530 PF00202 Aminotransferase class-III BKD09_RS05535 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BKD09_RS05535 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BKD09_RS05540 PF01430 Hsp33 protein BKD09_RS05545 PF04379 ApaG domain BKD09_RS05565 PF01053 Cys/Met metabolism PLP-dependent enzyme BKD09_RS05570 PF00692 dUTPase BKD09_RS05575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS05575 PF00989 PAS fold BKD09_RS05575 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS05605 PF12833 Helix-turn-helix domain BKD09_RS05610 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BKD09_RS05610 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BKD09_RS05625 PF07883 Cupin domain BKD09_RS05625 PF01381 Helix-turn-helix BKD09_RS05640 PF00356 Bacterial regulatory proteins, lacI family BKD09_RS05645 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BKD09_RS05645 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BKD09_RS05655 PF00005 ABC transporter BKD09_RS05660 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS05670 PF00248 Aldo/keto reductase family BKD09_RS05685 PF01042 Endoribonuclease L-PSP BKD09_RS05695 PF00890 FAD binding domain BKD09_RS05710 PF02630 SCO1/SenC BKD09_RS05715 PF00497 Bacterial extracellular solute-binding proteins, family 3 BKD09_RS05720 PF01921 tRNA synthetases class I (K) BKD09_RS05725 PF00194 Eukaryotic-type carbonic anhydrase BKD09_RS05740 PF01180 Dihydroorotate dehydrogenase BKD09_RS05750 PF00753 Metallo-beta-lactamase superfamily BKD09_RS05760 PF04675 DNA ligase N terminus BKD09_RS05760 PF04679 ATP dependent DNA ligase C terminal region BKD09_RS05760 PF01068 ATP dependent DNA ligase domain BKD09_RS05780 PF00271 Helicase conserved C-terminal domain BKD09_RS05780 PF00270 DEAD/DEAH box helicase BKD09_RS05780 PF08494 DEAD/H associated BKD09_RS05800 PF00156 Phosphoribosyl transferase domain BKD09_RS05805 PF02798 Glutathione S-transferase, N-terminal domain BKD09_RS05805 PF00043 Glutathione S-transferase, C-terminal domain BKD09_RS05810 PF01810 LysE type translocator BKD09_RS05815 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BKD09_RS05815 PF00476 DNA polymerase family A BKD09_RS05815 PF01612 3'-5' exonuclease BKD09_RS05815 PF01367 5'-3' exonuclease, C-terminal SAM fold BKD09_RS05825 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BKD09_RS05825 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BKD09_RS05825 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BKD09_RS05830 PF00270 DEAD/DEAH box helicase BKD09_RS05830 PF04408 Helicase associated domain (HA2) BKD09_RS05830 PF00271 Helicase conserved C-terminal domain BKD09_RS05830 PF08482 ATP-dependent helicase C-terminal BKD09_RS05840 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BKD09_RS05840 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BKD09_RS05840 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BKD09_RS05840 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BKD09_RS05845 PF01037 Lrp/AsnC ligand binding domain BKD09_RS05845 PF13404 AsnC-type helix-turn-helix domain BKD09_RS05850 PF00294 pfkB family carbohydrate kinase BKD09_RS05855 PF09297 NADH pyrophosphatase zinc ribbon domain BKD09_RS05855 PF00293 NUDIX domain BKD09_RS05865 PF13378 Enolase C-terminal domain-like BKD09_RS05865 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BKD09_RS05875 PF00005 ABC transporter BKD09_RS05880 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS05885 PF00497 Bacterial extracellular solute-binding proteins, family 3 BKD09_RS05890 PF06628 Catalase-related immune-responsive BKD09_RS05890 PF00199 Catalase BKD09_RS05900 PF12833 Helix-turn-helix domain BKD09_RS05900 PF01965 DJ-1/PfpI family BKD09_RS05910 PF12170 DNA polymerase III tau subunit V interacting with alpha BKD09_RS05910 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding BKD09_RS05910 PF12169 DNA polymerase III subunits gamma and tau domain III BKD09_RS05915 PF02575 YbaB/EbfC DNA-binding family BKD09_RS05920 PF02132 RecR protein BKD09_RS05920 PF13662 Toprim domain BKD09_RS05930 PF07690 Major Facilitator Superfamily BKD09_RS05935 PF02646 RmuC family BKD09_RS05940 PF01327 Polypeptide deformylase BKD09_RS05945 PF02911 Formyl transferase, C-terminal domain BKD09_RS05945 PF00551 Formyl transferase BKD09_RS05950 PF01416 tRNA pseudouridine synthase BKD09_RS05955 PF07687 Peptidase dimerisation domain BKD09_RS05955 PF01546 Peptidase family M20/M25/M40 BKD09_RS05965 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal BKD09_RS05965 PF14602 Hexapeptide repeat of succinyl-transferase BKD09_RS05965 PF00132 Bacterial transferase hexapeptide (six repeats) BKD09_RS05980 PF00696 Amino acid kinase family BKD09_RS05990 PF01926 50S ribosome-binding GTPase BKD09_RS05995 PF14849 YidC periplasmic domain BKD09_RS05995 PF02096 60Kd inner membrane protein BKD09_RS06000 PF00825 Ribonuclease P BKD09_RS06010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS06010 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS06010 PF00989 PAS fold BKD09_RS06020 PF00561 alpha/beta hydrolase fold BKD09_RS06030 PF00571 CBS domain BKD09_RS06045 PF05088 Bacterial NAD-glutamate dehydrogenase BKD09_RS06065 PF00266 Aminotransferase class-V BKD09_RS06075 PF00296 Luciferase-like monooxygenase BKD09_RS06080 PF03466 LysR substrate binding domain BKD09_RS06080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS06085 PF17885 Styrene monooxygenase A putative substrate binding domain BKD09_RS06090 PF01613 Flavin reductase like domain BKD09_RS06095 PF12833 Helix-turn-helix domain BKD09_RS06120 PF02082 Transcriptional regulator BKD09_RS06125 PF08497 Radical SAM N-terminal BKD09_RS06125 PF04055 Radical SAM superfamily BKD09_RS06125 PF11842 Domain of unknown function (DUF3362) BKD09_RS06135 PF07729 FCD domain BKD09_RS06135 PF00392 Bacterial regulatory proteins, gntR family BKD09_RS06140 PF01565 FAD binding domain BKD09_RS06140 PF02913 FAD linked oxidases, C-terminal domain BKD09_RS06145 PF00701 Dihydrodipicolinate synthetase family BKD09_RS06150 PF00593 TonB dependent receptor BKD09_RS06155 PF13416 Bacterial extracellular solute-binding protein BKD09_RS06165 PF00581 Rhodanese-like domain BKD09_RS06170 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BKD09_RS06170 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BKD09_RS06185 PF07519 Tannase and feruloyl esterase BKD09_RS06190 PF07690 Major Facilitator Superfamily BKD09_RS06195 PF13533 Biotin-lipoyl like BKD09_RS06200 PF00440 Bacterial regulatory proteins, tetR family BKD09_RS06210 PF00378 Enoyl-CoA hydratase/isomerase BKD09_RS06215 PF02203 Tar ligand binding domain homologue BKD09_RS06215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BKD09_RS06215 PF00672 HAMP domain BKD09_RS06220 PF00701 Dihydrodipicolinate synthetase family BKD09_RS06235 PF06299 Protein of unknown function (DUF1045) BKD09_RS06240 PF07969 Amidohydrolase family BKD09_RS06245 PF00132 Bacterial transferase hexapeptide (six repeats) BKD09_RS06250 PF00005 ABC transporter BKD09_RS06260 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS06265 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS06270 PF00392 Bacterial regulatory proteins, gntR family BKD09_RS06270 PF07702 UTRA domain BKD09_RS06275 PF06754 Phosphonate metabolism protein PhnG BKD09_RS06280 PF05845 Bacterial phosphonate metabolism protein (PhnH) BKD09_RS06285 PF05861 Bacterial phosphonate metabolism protein (PhnI) BKD09_RS06290 PF06007 Phosphonate metabolism protein PhnJ BKD09_RS06295 PF00005 ABC transporter BKD09_RS06300 PF00005 ABC transporter BKD09_RS06305 PF07969 Amidohydrolase family BKD09_RS06310 PF00625 Guanylate kinase BKD09_RS06330 PF09084 NMT1/THI5 like BKD09_RS06335 PF12697 Alpha/beta hydrolase family BKD09_RS06340 PF01053 Cys/Met metabolism PLP-dependent enzyme BKD09_RS06350 PF03401 Tripartite tricarboxylate transporter family receptor BKD09_RS06355 PF01613 Flavin reductase like domain BKD09_RS06360 PF01557 Fumarylacetoacetate (FAA) hydrolase family BKD09_RS06365 PF01557 Fumarylacetoacetate (FAA) hydrolase family BKD09_RS06375 PF04909 Amidohydrolase BKD09_RS06380 PF00296 Luciferase-like monooxygenase BKD09_RS06400 PF01740 STAS domain BKD09_RS06400 PF00916 Sulfate permease family BKD09_RS06415 PF00027 Cyclic nucleotide-binding domain BKD09_RS06415 PF13545 Crp-like helix-turn-helix domain BKD09_RS06420 PF03330 Lytic transglycolase BKD09_RS06440 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKD09_RS06455 PF00561 alpha/beta hydrolase fold BKD09_RS06460 PF17754 MftR C-terminal domain BKD09_RS06460 PF00440 Bacterial regulatory proteins, tetR family BKD09_RS06465 PF00106 short chain dehydrogenase BKD09_RS06470 PF13460 NAD(P)H-binding BKD09_RS06480 PF00815 Histidinol dehydrogenase BKD09_RS06485 PF06793 Uncharacterised protein family (UPF0262) BKD09_RS06490 PF01451 Low molecular weight phosphotyrosine protein phosphatase BKD09_RS06495 PF02545 Maf-like protein BKD09_RS06500 PF03884 DNA gyrase inhibitor YacG BKD09_RS06530 PF00072 Response regulator receiver domain BKD09_RS06530 PF13426 PAS domain BKD09_RS06530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS06545 PF01593 Flavin containing amine oxidoreductase BKD09_RS06555 PF00857 Isochorismatase family BKD09_RS06575 PF00248 Aldo/keto reductase family BKD09_RS06585 PF00293 NUDIX domain BKD09_RS06605 PF16868 NMT1-like family BKD09_RS06630 PF00999 Sodium/hydrogen exchanger family BKD09_RS06645 PF00501 AMP-binding enzyme BKD09_RS06645 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS06645 PF16177 Acetyl-coenzyme A synthetase N-terminus BKD09_RS06655 PF03922 OmpW family BKD09_RS06665 PF02401 LytB protein BKD09_RS06670 PF01636 Phosphotransferase enzyme family BKD09_RS06675 PF00075 RNase H BKD09_RS06680 PF08534 Redoxin BKD09_RS06680 PF00462 Glutaredoxin BKD09_RS06690 PF00501 AMP-binding enzyme BKD09_RS06690 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS06695 PF07943 Penicillin-binding protein 5, C-terminal domain BKD09_RS06695 PF00768 D-alanyl-D-alanine carboxypeptidase BKD09_RS06700 PF00005 ABC transporter BKD09_RS06700 PF00664 ABC transporter transmembrane region BKD09_RS06715 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BKD09_RS06720 PF09335 SNARE associated Golgi protein BKD09_RS06730 PF10415 Fumarase C C-terminus BKD09_RS06730 PF00206 Lyase BKD09_RS06745 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS06745 PF00501 AMP-binding enzyme BKD09_RS06750 PF03060 Nitronate monooxygenase BKD09_RS06795 PF07730 Histidine kinase BKD09_RS06800 PF00158 Sigma-54 interaction domain BKD09_RS06800 PF00072 Response regulator receiver domain BKD09_RS06800 PF02954 Bacterial regulatory protein, Fis family BKD09_RS06820 PF12833 Helix-turn-helix domain BKD09_RS06845 PF02600 Disulfide bond formation protein DsbB BKD09_RS06880 PF06965 Na+/H+ antiporter 1 BKD09_RS06880 PF13462 Thioredoxin BKD09_RS06895 PF13180 PDZ domain BKD09_RS06900 PF01546 Peptidase family M20/M25/M40 BKD09_RS06905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKD09_RS06910 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS06915 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS06915 PF12911 N-terminal TM domain of oligopeptide transport permease C BKD09_RS06920 PF00005 ABC transporter BKD09_RS06920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKD09_RS06925 PF00005 ABC transporter BKD09_RS06925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKD09_RS06940 PF00563 EAL domain BKD09_RS06940 PF01590 GAF domain BKD09_RS06940 PF00990 Diguanylate cyclase, GGDEF domain BKD09_RS06940 PF00360 Phytochrome region BKD09_RS06945 PF07311 Dodecin BKD09_RS06950 PF00892 EamA-like transporter family BKD09_RS06960 PF00722 Glycosyl hydrolases family 16 BKD09_RS06960 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) BKD09_RS06965 PF00232 Glycosyl hydrolase family 1 BKD09_RS06985 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKD09_RS06985 PF18113 Rubredoxin binding C-terminal domain BKD09_RS06995 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS06995 PF00501 AMP-binding enzyme BKD09_RS07010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS07010 PF03466 LysR substrate binding domain BKD09_RS07015 PF06029 AlkA N-terminal domain BKD09_RS07015 PF00730 HhH-GPD superfamily base excision DNA repair protein BKD09_RS07015 PF12833 Helix-turn-helix domain BKD09_RS07015 PF02805 Metal binding domain of Ada BKD09_RS07020 PF00749 tRNA synthetases class I (E and Q), catalytic domain BKD09_RS07025 PF00072 Response regulator receiver domain BKD09_RS07025 PF01627 Hpt domain BKD09_RS07025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS07025 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS07040 PF01923 Cobalamin adenosyltransferase BKD09_RS07045 PF01012 Electron transfer flavoprotein domain BKD09_RS07050 PF01012 Electron transfer flavoprotein domain BKD09_RS07050 PF00766 Electron transfer flavoprotein FAD-binding domain BKD09_RS07055 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BKD09_RS07055 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BKD09_RS07065 PF08534 Redoxin BKD09_RS07070 PF14698 Argininosuccinate lyase C-terminal BKD09_RS07070 PF00206 Lyase BKD09_RS07080 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BKD09_RS07080 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BKD09_RS07085 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BKD09_RS07085 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BKD09_RS07090 PF02627 Carboxymuconolactone decarboxylase family BKD09_RS07105 PF00072 Response regulator receiver domain BKD09_RS07105 PF00158 Sigma-54 interaction domain BKD09_RS07105 PF02954 Bacterial regulatory protein, Fis family BKD09_RS07115 PF00005 ABC transporter BKD09_RS07145 PF02153 Prephenate dehydrogenase BKD09_RS07150 PF00155 Aminotransferase class I and II BKD09_RS07160 PF00561 alpha/beta hydrolase fold BKD09_RS07165 PF00561 alpha/beta hydrolase fold BKD09_RS07165 PF07021 Methionine biosynthesis protein MetW BKD09_RS07170 PF00561 alpha/beta hydrolase fold BKD09_RS07185 PF00004 ATPase family associated with various cellular activities (AAA) BKD09_RS07185 PF07724 AAA domain (Cdc48 subfamily) BKD09_RS07185 PF10431 C-terminal, D2-small domain, of ClpB protein BKD09_RS07185 PF17871 AAA lid domain BKD09_RS07185 PF02861 Clp amino terminal domain, pathogenicity island component BKD09_RS07200 PF01551 Peptidase family M23 BKD09_RS07240 PF03480 Bacterial extracellular solute-binding protein, family 7 BKD09_RS07245 PF03480 Bacterial extracellular solute-binding protein, family 7 BKD09_RS07265 PF01488 Shikimate / quinate 5-dehydrogenase BKD09_RS07265 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BKD09_RS07265 PF08501 Shikimate dehydrogenase substrate binding domain BKD09_RS07270 PF05721 Phytanoyl-CoA dioxygenase (PhyH) BKD09_RS07280 PF01546 Peptidase family M20/M25/M40 BKD09_RS07280 PF07687 Peptidase dimerisation domain BKD09_RS07285 PF04542 Sigma-70 region 2 BKD09_RS07285 PF08281 Sigma-70, region 4 BKD09_RS07285 PF12680 SnoaL-like domain BKD09_RS07290 PF02627 Carboxymuconolactone decarboxylase family BKD09_RS07300 PF12697 Alpha/beta hydrolase family BKD09_RS07310 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS07310 PF00501 AMP-binding enzyme BKD09_RS07315 PF02803 Thiolase, C-terminal domain BKD09_RS07315 PF00108 Thiolase, N-terminal domain BKD09_RS07325 PF00106 short chain dehydrogenase BKD09_RS07330 PF00378 Enoyl-CoA hydratase/isomerase BKD09_RS07335 PF00501 AMP-binding enzyme BKD09_RS07335 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS07335 PF00668 Condensation domain BKD09_RS07335 PF00550 Phosphopantetheine attachment site BKD09_RS07340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BKD09_RS07340 PF02770 Acyl-CoA dehydrogenase, middle domain BKD09_RS07340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BKD09_RS07345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BKD09_RS07345 PF02770 Acyl-CoA dehydrogenase, middle domain BKD09_RS07345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BKD09_RS07350 PF02770 Acyl-CoA dehydrogenase, middle domain BKD09_RS07350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BKD09_RS07350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BKD09_RS07355 PF00881 Nitroreductase family BKD09_RS07360 PF04542 Sigma-70 region 2 BKD09_RS07360 PF08281 Sigma-70, region 4 BKD09_RS07370 PF00072 Response regulator receiver domain BKD09_RS07400 PF13298 DNA polymerase Ligase (LigD) BKD09_RS07400 PF01068 ATP dependent DNA ligase domain BKD09_RS07400 PF04679 ATP dependent DNA ligase C terminal region BKD09_RS07425 PF00239 Resolvase, N terminal domain BKD09_RS07425 PF02796 Helix-turn-helix domain of resolvase BKD09_RS07470 PF00183 Hsp90 protein BKD09_RS07470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS07490 PF00501 AMP-binding enzyme BKD09_RS07490 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS07540 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BKD09_RS07540 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BKD09_RS07560 PF00005 ABC transporter BKD09_RS07565 PF00950 ABC 3 transport family BKD09_RS07570 PF01297 Zinc-uptake complex component A periplasmic BKD09_RS07575 PF07683 Cobalamin synthesis protein cobW C-terminal domain BKD09_RS07575 PF02492 CobW/HypB/UreG, nucleotide-binding domain BKD09_RS07585 PF02308 MgtC family BKD09_RS07595 PF06314 Acetoacetate decarboxylase (ADC) BKD09_RS07600 PF16653 Saccharopine dehydrogenase C-terminal domain BKD09_RS07600 PF03435 Saccharopine dehydrogenase NADP binding domain BKD09_RS07615 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BKD09_RS07615 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BKD09_RS07625 PF01432 Peptidase family M3 BKD09_RS07635 PF03824 High-affinity nickel-transport protein BKD09_RS07650 PF00762 Ferrochelatase BKD09_RS07665 PF01145 SPFH domain / Band 7 family BKD09_RS07665 PF16200 C-terminal region of band_7 BKD09_RS07690 PF01380 SIS domain BKD09_RS07690 PF00571 CBS domain BKD09_RS07700 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BKD09_RS07700 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKD09_RS07705 PF00310 Glutamine amidotransferases class-II BKD09_RS07705 PF04898 Glutamate synthase central domain BKD09_RS07705 PF01493 GXGXG motif BKD09_RS07705 PF01645 Conserved region in glutamate synthase BKD09_RS07720 PF00011 Hsp20/alpha crystallin family BKD09_RS07735 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS07740 PF01810 LysE type translocator BKD09_RS07755 PF03466 LysR substrate binding domain BKD09_RS07755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS07760 PF03401 Tripartite tricarboxylate transporter family receptor BKD09_RS07765 PF00459 Inositol monophosphatase family BKD09_RS07775 PF00072 Response regulator receiver domain BKD09_RS07825 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BKD09_RS07825 PF13378 Enolase C-terminal domain-like BKD09_RS07830 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS07860 PF02027 RolB/RolC glucosidase family BKD09_RS07860 PF01593 Flavin containing amine oxidoreductase BKD09_RS07870 PF00672 HAMP domain BKD09_RS07870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS07870 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS07875 PF00072 Response regulator receiver domain BKD09_RS07875 PF00486 Transcriptional regulatory protein, C terminal BKD09_RS07885 PF00933 Glycosyl hydrolase family 3 N terminal domain BKD09_RS07890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKD09_RS07895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS07895 PF03466 LysR substrate binding domain BKD09_RS07905 PF01979 Amidohydrolase family BKD09_RS07935 PF00355 Rieske [2Fe-2S] domain BKD09_RS07945 PF00561 alpha/beta hydrolase fold BKD09_RS07945 PF00106 short chain dehydrogenase BKD09_RS07950 PF00171 Aldehyde dehydrogenase family BKD09_RS07955 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BKD09_RS07970 PF00205 Thiamine pyrophosphate enzyme, central domain BKD09_RS07970 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BKD09_RS07970 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BKD09_RS07975 PF00296 Luciferase-like monooxygenase BKD09_RS07985 PF00497 Bacterial extracellular solute-binding proteins, family 3 BKD09_RS07990 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS07995 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS08000 PF00005 ABC transporter BKD09_RS08010 PF02627 Carboxymuconolactone decarboxylase family BKD09_RS08015 PF07690 Major Facilitator Superfamily BKD09_RS08020 PF13533 Biotin-lipoyl like BKD09_RS08025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS08025 PF03466 LysR substrate binding domain BKD09_RS08030 PF01425 Amidase BKD09_RS08040 PF01037 Lrp/AsnC ligand binding domain BKD09_RS08045 PF01557 Fumarylacetoacetate (FAA) hydrolase family BKD09_RS08050 PF00296 Luciferase-like monooxygenase BKD09_RS08055 PF02615 Malate/L-lactate dehydrogenase BKD09_RS08060 PF03707 Bacterial signalling protein N terminal repeat BKD09_RS08060 PF00990 Diguanylate cyclase, GGDEF domain BKD09_RS08060 PF00563 EAL domain BKD09_RS08070 PF16363 GDP-mannose 4,6 dehydratase BKD09_RS08075 PF03808 Glycosyl transferase WecB/TagA/CpsF family BKD09_RS08095 PF00535 Glycosyl transferase family 2 BKD09_RS08120 PF01037 Lrp/AsnC ligand binding domain BKD09_RS08130 PF03358 NADPH-dependent FMN reductase BKD09_RS08135 PF02678 Pirin BKD09_RS08135 PF17954 Quercetinase C-terminal cupin domain BKD09_RS08145 PF03466 LysR substrate binding domain BKD09_RS08145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS08150 PF01797 Transposase IS200 like BKD09_RS08160 PF03401 Tripartite tricarboxylate transporter family receptor BKD09_RS08170 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS08175 PF04073 Aminoacyl-tRNA editing domain BKD09_RS08180 PF13419 Haloacid dehalogenase-like hydrolase BKD09_RS08185 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BKD09_RS08205 PF00444 Ribosomal protein L36 BKD09_RS08225 PF00561 alpha/beta hydrolase fold BKD09_RS08230 PF00034 Cytochrome c BKD09_RS08235 PF01565 FAD binding domain BKD09_RS08235 PF02913 FAD linked oxidases, C-terminal domain BKD09_RS08250 PF01565 FAD binding domain BKD09_RS08255 PF13183 4Fe-4S dicluster domain BKD09_RS08255 PF02754 Cysteine-rich domain BKD09_RS08270 PF00005 ABC transporter BKD09_RS08270 PF06472 ABC transporter transmembrane region 2 BKD09_RS08275 PF02652 L-lactate permease BKD09_RS08290 PF00118 TCP-1/cpn60 chaperonin family BKD09_RS08295 PF00166 Chaperonin 10 Kd subunit BKD09_RS08310 PF01476 LysM domain BKD09_RS08310 PF17969 L,D-transpeptidase C-terminal domain BKD09_RS08310 PF03734 L,D-transpeptidase catalytic domain BKD09_RS08315 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) BKD09_RS08325 PF00535 Glycosyl transferase family 2 BKD09_RS08330 PF01634 ATP phosphoribosyltransferase BKD09_RS08335 PF13393 Histidyl-tRNA synthetase BKD09_RS08355 PF04452 RNA methyltransferase BKD09_RS08365 PF01040 UbiA prenyltransferase family BKD09_RS08375 PF01523 Putative modulator of DNA gyrase BKD09_RS08380 PF00459 Inositol monophosphatase family BKD09_RS08395 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BKD09_RS08400 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BKD09_RS08430 PF13742 OB-fold nucleic acid binding domain BKD09_RS08430 PF02601 Exonuclease VII, large subunit BKD09_RS08450 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BKD09_RS08450 PF02843 Phosphoribosylglycinamide synthetase, C domain BKD09_RS08450 PF02844 Phosphoribosylglycinamide synthetase, N domain BKD09_RS08455 PF00561 alpha/beta hydrolase fold BKD09_RS08460 PF14437 MafB19-like deaminase BKD09_RS08465 PF01479 S4 domain BKD09_RS08465 PF00849 RNA pseudouridylate synthase BKD09_RS08475 PF08676 MutL C terminal dimerisation domain BKD09_RS08475 PF01119 DNA mismatch repair protein, C-terminal domain BKD09_RS08485 PF00732 GMC oxidoreductase BKD09_RS08485 PF05199 GMC oxidoreductase BKD09_RS08495 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BKD09_RS08510 PF00472 RF-1 domain BKD09_RS08515 PF05193 Peptidase M16 inactive domain BKD09_RS08520 PF05193 Peptidase M16 inactive domain BKD09_RS08520 PF00675 Insulinase (Peptidase family M16) BKD09_RS08530 PF01252 Signal peptidase (SPase) II BKD09_RS08535 PF08264 Anticodon-binding domain of tRNA BKD09_RS08535 PF00133 tRNA synthetases class I (I, L, M and V) BKD09_RS08540 PF01687 Riboflavin kinase BKD09_RS08540 PF06574 FAD synthetase BKD09_RS08545 PF00072 Response regulator receiver domain BKD09_RS08555 PF00563 EAL domain BKD09_RS08555 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS08560 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS08565 PF08241 Methyltransferase domain BKD09_RS08570 PF03631 Virulence factor BrkB BKD09_RS08580 PF05175 Methyltransferase small domain BKD09_RS08585 PF02391 MoaE protein BKD09_RS08595 PF01066 CDP-alcohol phosphatidyltransferase BKD09_RS08600 PF02151 UvrB/uvrC motif BKD09_RS08600 PF08459 UvrC Helix-hairpin-helix N-terminal BKD09_RS08600 PF01541 GIY-YIG catalytic domain BKD09_RS08605 PF13505 Outer membrane protein beta-barrel domain BKD09_RS08610 PF00313 'Cold-shock' DNA-binding domain BKD09_RS08615 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ BKD09_RS08620 PF00445 Ribonuclease T2 family BKD09_RS08645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS08645 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS08645 PF00672 HAMP domain BKD09_RS08650 PF00486 Transcriptional regulatory protein, C terminal BKD09_RS08650 PF00072 Response regulator receiver domain BKD09_RS08655 PF12802 MarR family BKD09_RS08660 PF01063 Amino-transferase class IV BKD09_RS08670 PF13393 Histidyl-tRNA synthetase BKD09_RS08670 PF03129 Anticodon binding domain BKD09_RS08675 PF01361 Tautomerase enzyme BKD09_RS08685 PF03807 NADP oxidoreductase coenzyme F420-dependent BKD09_RS08685 PF14748 Pyrroline-5-carboxylate reductase dimerisation BKD09_RS08695 PF00885 6,7-dimethyl-8-ribityllumazine synthase BKD09_RS08700 PF00563 EAL domain BKD09_RS08700 PF03707 Bacterial signalling protein N terminal repeat BKD09_RS08700 PF00990 Diguanylate cyclase, GGDEF domain BKD09_RS08705 PF00941 FAD binding domain in molybdopterin dehydrogenase BKD09_RS08705 PF03450 CO dehydrogenase flavoprotein C-terminal domain BKD09_RS08710 PF00111 2Fe-2S iron-sulfur cluster binding domain BKD09_RS08710 PF01799 [2Fe-2S] binding domain BKD09_RS08715 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BKD09_RS08715 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BKD09_RS08720 PF10431 C-terminal, D2-small domain, of ClpB protein BKD09_RS08720 PF17871 AAA lid domain BKD09_RS08720 PF00004 ATPase family associated with various cellular activities (AAA) BKD09_RS08720 PF07724 AAA domain (Cdc48 subfamily) BKD09_RS08720 PF02861 Clp amino terminal domain, pathogenicity island component BKD09_RS08730 PF02625 XdhC and CoxI family BKD09_RS08730 PF13478 XdhC Rossmann domain BKD09_RS08740 PF07478 D-ala D-ala ligase C-terminus BKD09_RS08750 PF14572 Phosphoribosyl synthetase-associated domain BKD09_RS08750 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BKD09_RS08765 PF02578 Multi-copper polyphenol oxidoreductase laccase BKD09_RS08775 PF01790 Prolipoprotein diacylglyceryl transferase BKD09_RS08790 PF01386 Ribosomal L25p family BKD09_RS08790 PF14693 Ribosomal protein TL5, C-terminal domain BKD09_RS08795 PF01195 Peptidyl-tRNA hydrolase BKD09_RS08800 PF06071 Protein of unknown function (DUF933) BKD09_RS08800 PF01926 50S ribosome-binding GTPase BKD09_RS08810 PF01575 MaoC like domain BKD09_RS08855 PF17757 UvrB interaction domain BKD09_RS08855 PF04851 Type III restriction enzyme, res subunit BKD09_RS08855 PF02151 UvrB/uvrC motif BKD09_RS08855 PF00271 Helicase conserved C-terminal domain BKD09_RS08855 PF12344 Ultra-violet resistance protein B BKD09_RS08870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS08870 PF03466 LysR substrate binding domain BKD09_RS08885 PF13417 Glutathione S-transferase, N-terminal domain BKD09_RS08910 PF00248 Aldo/keto reductase family BKD09_RS08930 PF02798 Glutathione S-transferase, N-terminal domain BKD09_RS08935 PF00155 Aminotransferase class I and II BKD09_RS08945 PF00679 Elongation factor G C-terminus BKD09_RS08945 PF03764 Elongation factor G, domain IV BKD09_RS08945 PF14492 Elongation Factor G, domain II BKD09_RS08945 PF00009 Elongation factor Tu GTP binding domain BKD09_RS08955 PF01740 STAS domain BKD09_RS08955 PF00916 Sulfate permease family BKD09_RS08965 PF08501 Shikimate dehydrogenase substrate binding domain BKD09_RS08965 PF01488 Shikimate / quinate 5-dehydrogenase BKD09_RS08965 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BKD09_RS08980 PF01070 FMN-dependent dehydrogenase BKD09_RS08990 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BKD09_RS08990 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BKD09_RS08990 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BKD09_RS08990 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BKD09_RS08995 PF07690 Major Facilitator Superfamily BKD09_RS09010 PF02798 Glutathione S-transferase, N-terminal domain BKD09_RS09030 PF01842 ACT domain BKD09_RS09030 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BKD09_RS09030 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BKD09_RS09035 PF02803 Thiolase, C-terminal domain BKD09_RS09035 PF00108 Thiolase, N-terminal domain BKD09_RS09040 PF01494 FAD binding domain BKD09_RS09045 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS09045 PF00989 PAS fold BKD09_RS09045 PF13188 PAS domain BKD09_RS09045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS09045 PF13426 PAS domain BKD09_RS09085 PF13614 AAA domain BKD09_RS09095 PF00701 Dihydrodipicolinate synthetase family BKD09_RS09100 PF03466 LysR substrate binding domain BKD09_RS09100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS09105 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKD09_RS09110 PF01037 Lrp/AsnC ligand binding domain BKD09_RS09115 PF03449 Transcription elongation factor, N-terminal BKD09_RS09115 PF01272 Transcription elongation factor, GreA/GreB, C-term BKD09_RS09120 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BKD09_RS09120 PF02142 MGS-like domain BKD09_RS09120 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BKD09_RS09125 PF07690 Major Facilitator Superfamily BKD09_RS09150 PF00117 Glutamine amidotransferase class-I BKD09_RS09150 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BKD09_RS09165 PF06441 Epoxide hydrolase N terminus BKD09_RS09170 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS09170 PF00501 AMP-binding enzyme BKD09_RS09175 PF12802 MarR family BKD09_RS09190 PF08448 PAS fold BKD09_RS09190 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS09190 PF00072 Response regulator receiver domain BKD09_RS09190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS09190 PF13188 PAS domain BKD09_RS09245 PF01810 LysE type translocator BKD09_RS09270 PF08275 DNA primase catalytic core, N-terminal domain BKD09_RS09270 PF13662 Toprim domain BKD09_RS09270 PF08278 DNA primase DnaG DnaB-binding BKD09_RS09270 PF10410 DnaB-helicase binding domain of primase BKD09_RS09270 PF01807 CHC2 zinc finger BKD09_RS09275 PF04546 Sigma-70, non-essential region BKD09_RS09275 PF03979 Sigma-70 factor, region 1.1 BKD09_RS09275 PF00140 Sigma-70 factor, region 1.2 BKD09_RS09275 PF04542 Sigma-70 region 2 BKD09_RS09275 PF04539 Sigma-70 region 3 BKD09_RS09275 PF04545 Sigma-70, region 4 BKD09_RS09285 PF00691 OmpA family BKD09_RS09285 PF05736 OprF membrane domain BKD09_RS09295 PF00106 short chain dehydrogenase BKD09_RS09305 PF01810 LysE type translocator BKD09_RS09310 PF00990 Diguanylate cyclase, GGDEF domain BKD09_RS09310 PF17151 Periplasmic sensor domain BKD09_RS09330 PF04542 Sigma-70 region 2 BKD09_RS09330 PF04545 Sigma-70, region 4 BKD09_RS09330 PF00140 Sigma-70 factor, region 1.2 BKD09_RS09335 PF00849 RNA pseudouridylate synthase BKD09_RS09365 PF01979 Amidohydrolase family BKD09_RS09370 PF07683 Cobalamin synthesis protein cobW C-terminal domain BKD09_RS09370 PF02492 CobW/HypB/UreG, nucleotide-binding domain BKD09_RS09400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BKD09_RS09400 PF08269 Cache domain BKD09_RS09405 PF00682 HMGL-like BKD09_RS09405 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BKD09_RS09405 PF00364 Biotin-requiring enzyme BKD09_RS09405 PF00289 Biotin carboxylase, N-terminal domain BKD09_RS09405 PF02785 Biotin carboxylase C-terminal domain BKD09_RS09405 PF02436 Conserved carboxylase domain BKD09_RS09410 PF00158 Sigma-54 interaction domain BKD09_RS09410 PF02954 Bacterial regulatory protein, Fis family BKD09_RS09410 PF01590 GAF domain BKD09_RS09415 PF01613 Flavin reductase like domain BKD09_RS09420 PF00296 Luciferase-like monooxygenase BKD09_RS09425 PF05035 2-keto-3-deoxy-galactonokinase BKD09_RS09430 PF01081 KDPG and KHG aldolase BKD09_RS09435 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BKD09_RS09435 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BKD09_RS09435 PF00205 Thiamine pyrophosphate enzyme, central domain BKD09_RS09455 PF01425 Amidase BKD09_RS09460 PF09663 Amidohydrolase ring-opening protein (Amido_AtzD_TrzD) BKD09_RS09465 PF09371 Tex-like protein N-terminal domain BKD09_RS09465 PF17674 HHH domain BKD09_RS09465 PF00575 S1 RNA binding domain BKD09_RS09465 PF16921 Tex protein YqgF-like domain BKD09_RS09475 PF00486 Transcriptional regulatory protein, C terminal BKD09_RS09475 PF00072 Response regulator receiver domain BKD09_RS09480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS09480 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS09480 PF00672 HAMP domain BKD09_RS09485 PF00072 Response regulator receiver domain BKD09_RS09485 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS09490 PF13180 PDZ domain BKD09_RS09495 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BKD09_RS09500 PF00701 Dihydrodipicolinate synthetase family BKD09_RS09505 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BKD09_RS09505 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BKD09_RS09510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BKD09_RS09510 PF02770 Acyl-CoA dehydrogenase, middle domain BKD09_RS09510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BKD09_RS09515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BKD09_RS09515 PF02770 Acyl-CoA dehydrogenase, middle domain BKD09_RS09515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BKD09_RS09520 PF00378 Enoyl-CoA hydratase/isomerase BKD09_RS09525 PF04011 LemA family BKD09_RS09530 PF04536 TPM domain BKD09_RS09550 PF02798 Glutathione S-transferase, N-terminal domain BKD09_RS09550 PF14497 Glutathione S-transferase, C-terminal domain BKD09_RS09555 PF02515 CoA-transferase family III BKD09_RS09560 PF01619 Proline dehydrogenase BKD09_RS09560 PF00171 Aldehyde dehydrogenase family BKD09_RS09560 PF14850 DNA-binding domain of Proline dehydrogenase BKD09_RS09560 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BKD09_RS09565 PF01037 Lrp/AsnC ligand binding domain BKD09_RS09570 PF00313 'Cold-shock' DNA-binding domain BKD09_RS09585 PF00672 HAMP domain BKD09_RS09585 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS09590 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase BKD09_RS09610 PF05128 Domain of unknown function (DUF697) BKD09_RS09615 PF04317 YcjX-like family, DUF463 BKD09_RS09620 PF03006 Haemolysin-III related BKD09_RS09640 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BKD09_RS09640 PF00205 Thiamine pyrophosphate enzyme, central domain BKD09_RS09640 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BKD09_RS09650 PF02515 CoA-transferase family III BKD09_RS09655 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BKD09_RS09655 PF02770 Acyl-CoA dehydrogenase, middle domain BKD09_RS09655 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BKD09_RS09660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS09660 PF03466 LysR substrate binding domain BKD09_RS09665 PF00067 Cytochrome P450 BKD09_RS09670 PF00067 Cytochrome P450 BKD09_RS09680 PF01435 Peptidase family M48 BKD09_RS09700 PF00291 Pyridoxal-phosphate dependent enzyme BKD09_RS09710 PF01476 LysM domain BKD09_RS09710 PF03734 L,D-transpeptidase catalytic domain BKD09_RS09710 PF17969 L,D-transpeptidase C-terminal domain BKD09_RS09715 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BKD09_RS09715 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BKD09_RS09745 PF03449 Transcription elongation factor, N-terminal BKD09_RS09745 PF01272 Transcription elongation factor, GreA/GreB, C-term BKD09_RS09790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS09790 PF03466 LysR substrate binding domain BKD09_RS09800 PF00171 Aldehyde dehydrogenase family BKD09_RS09830 PF03061 Thioesterase superfamily BKD09_RS09835 PF03061 Thioesterase superfamily BKD09_RS09845 PF00117 Glutamine amidotransferase class-I BKD09_RS09845 PF02540 NAD synthase BKD09_RS09845 PF00958 GMP synthase C terminal domain BKD09_RS09850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS09850 PF03466 LysR substrate binding domain BKD09_RS09855 PF00795 Carbon-nitrogen hydrolase BKD09_RS09860 PF00497 Bacterial extracellular solute-binding proteins, family 3 BKD09_RS09865 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS09870 PF00005 ABC transporter BKD09_RS09875 PF00497 Bacterial extracellular solute-binding proteins, family 3 BKD09_RS09880 PF01522 Polysaccharide deacetylase BKD09_RS09885 PF01177 Asp/Glu/Hydantoin racemase BKD09_RS09895 PF01979 Amidohydrolase family BKD09_RS09900 PF03466 LysR substrate binding domain BKD09_RS09900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS09910 PF08402 TOBE domain BKD09_RS09910 PF00005 ABC transporter BKD09_RS09915 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS09920 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS09925 PF01266 FAD dependent oxidoreductase BKD09_RS09935 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKD09_RS09935 PF04324 BFD-like [2Fe-2S] binding domain BKD09_RS09965 PF00005 ABC transporter BKD09_RS09970 PF00375 Sodium:dicarboxylate symporter family BKD09_RS09975 PF00860 Permease family BKD09_RS10005 PF02146 Sir2 family BKD09_RS10010 PF05378 Hydantoinase/oxoprolinase N-terminal region BKD09_RS10010 PF01968 Hydantoinase/oxoprolinase BKD09_RS10030 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BKD09_RS10030 PF13360 PQQ-like domain BKD09_RS10040 PF00497 Bacterial extracellular solute-binding proteins, family 3 BKD09_RS10040 PF01464 Transglycosylase SLT domain BKD09_RS10045 PF02798 Glutathione S-transferase, N-terminal domain BKD09_RS10045 PF00043 Glutathione S-transferase, C-terminal domain BKD09_RS10050 PF00440 Bacterial regulatory proteins, tetR family BKD09_RS10055 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BKD09_RS10060 PF03795 YCII-related domain BKD09_RS10065 PF04542 Sigma-70 region 2 BKD09_RS10065 PF08281 Sigma-70, region 4 BKD09_RS10105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BKD09_RS10105 PF08447 PAS fold BKD09_RS10105 PF13426 PAS domain BKD09_RS10115 PF03795 YCII-related domain BKD09_RS10125 PF00440 Bacterial regulatory proteins, tetR family BKD09_RS10145 PF06426 Serine acetyltransferase, N-terminal BKD09_RS10145 PF00132 Bacterial transferase hexapeptide (six repeats) BKD09_RS10160 PF01618 MotA/TolQ/ExbB proton channel family BKD09_RS10165 PF02472 Biopolymer transport protein ExbD/TolR BKD09_RS10175 PF07676 WD40-like Beta Propeller Repeat BKD09_RS10175 PF04052 TolB amino-terminal domain BKD09_RS10180 PF08447 PAS fold BKD09_RS10180 PF00563 EAL domain BKD09_RS10180 PF08448 PAS fold BKD09_RS10180 PF00990 Diguanylate cyclase, GGDEF domain BKD09_RS10190 PF00691 OmpA family BKD09_RS10200 PF01171 PP-loop family BKD09_RS10205 PF00004 ATPase family associated with various cellular activities (AAA) BKD09_RS10205 PF01434 Peptidase family M41 BKD09_RS10205 PF06480 FtsH Extracellular BKD09_RS10205 PF17862 AAA+ lid domain BKD09_RS10210 PF00561 alpha/beta hydrolase fold BKD09_RS10215 PF00892 EamA-like transporter family BKD09_RS10220 PF00440 Bacterial regulatory proteins, tetR family BKD09_RS10230 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS10235 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS10265 PF00224 Pyruvate kinase, barrel domain BKD09_RS10265 PF02887 Pyruvate kinase, alpha/beta domain BKD09_RS10280 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) BKD09_RS10295 PF05951 Bacterial protein of unknown function (DUF882) BKD09_RS10300 PF03734 L,D-transpeptidase catalytic domain BKD09_RS10300 PF01471 Putative peptidoglycan binding domain BKD09_RS10305 PF00158 Sigma-54 interaction domain BKD09_RS10305 PF00072 Response regulator receiver domain BKD09_RS10305 PF02954 Bacterial regulatory protein, Fis family BKD09_RS10325 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BKD09_RS10325 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BKD09_RS10330 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BKD09_RS10335 PF02233 NAD(P) transhydrogenase beta subunit BKD09_RS10340 PF12146 Serine aminopeptidase, S33 BKD09_RS10345 PF01699 Sodium/calcium exchanger protein BKD09_RS10350 PF07883 Cupin domain BKD09_RS10365 PF01165 Ribosomal protein S21 BKD09_RS10370 PF00230 Major intrinsic protein BKD09_RS10375 PF02222 ATP-grasp domain BKD09_RS10375 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BKD09_RS10380 PF00731 AIR carboxylase BKD09_RS10385 PF13426 PAS domain BKD09_RS10385 PF08448 PAS fold BKD09_RS10385 PF08447 PAS fold BKD09_RS10385 PF05231 MASE1 BKD09_RS10385 PF00990 Diguanylate cyclase, GGDEF domain BKD09_RS10385 PF00563 EAL domain BKD09_RS10410 PF01266 FAD dependent oxidoreductase BKD09_RS10415 PF03707 Bacterial signalling protein N terminal repeat BKD09_RS10415 PF00990 Diguanylate cyclase, GGDEF domain BKD09_RS10415 PF00563 EAL domain BKD09_RS10415 PF13188 PAS domain BKD09_RS10420 PF01266 FAD dependent oxidoreductase BKD09_RS10420 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BKD09_RS10425 PF00005 ABC transporter BKD09_RS10425 PF08402 TOBE domain BKD09_RS10430 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS10435 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS10450 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS10455 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS10475 PF01144 Coenzyme A transferase BKD09_RS10480 PF01144 Coenzyme A transferase BKD09_RS10495 PF07732 Multicopper oxidase BKD09_RS10495 PF00394 Multicopper oxidase BKD09_RS10505 PF04055 Radical SAM superfamily BKD09_RS10530 PF00072 Response regulator receiver domain BKD09_RS10530 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS10540 PF00005 ABC transporter BKD09_RS10545 PF01032 FecCD transport family BKD09_RS10560 PF00593 TonB dependent receptor BKD09_RS10560 PF07715 TonB-dependent Receptor Plug Domain BKD09_RS10575 PF01618 MotA/TolQ/ExbB proton channel family BKD09_RS10580 PF02472 Biopolymer transport protein ExbD/TolR BKD09_RS10600 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS10605 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS10615 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BKD09_RS10615 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BKD09_RS10620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BKD09_RS10620 PF00672 HAMP domain BKD09_RS10625 PF03401 Tripartite tricarboxylate transporter family receptor BKD09_RS10630 PF00892 EamA-like transporter family BKD09_RS10645 PF00709 Adenylosuccinate synthetase BKD09_RS10690 PF01641 SelR domain BKD09_RS10695 PF01625 Peptide methionine sulfoxide reductase BKD09_RS10705 PF13538 UvrD-like helicase C-terminal domain BKD09_RS10710 PF03264 NapC/NirT cytochrome c family, N-terminal region BKD09_RS10715 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) BKD09_RS10720 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BKD09_RS10720 PF00384 Molybdopterin oxidoreductase BKD09_RS10720 PF01568 Molydopterin dinucleotide binding domain BKD09_RS10745 PF02080 TrkA-C domain BKD09_RS10745 PF03600 Citrate transporter BKD09_RS10760 PF00296 Luciferase-like monooxygenase BKD09_RS10780 PF03734 L,D-transpeptidase catalytic domain BKD09_RS10780 PF01476 LysM domain BKD09_RS10780 PF17969 L,D-transpeptidase C-terminal domain BKD09_RS10790 PF00067 Cytochrome P450 BKD09_RS10800 PF09084 NMT1/THI5 like BKD09_RS10805 PF09084 NMT1/THI5 like BKD09_RS10810 PF00296 Luciferase-like monooxygenase BKD09_RS10815 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS10820 PF00005 ABC transporter BKD09_RS10825 PF01613 Flavin reductase like domain BKD09_RS10840 PF02954 Bacterial regulatory protein, Fis family BKD09_RS10840 PF00158 Sigma-54 interaction domain BKD09_RS10845 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BKD09_RS10855 PF14842 FliG N-terminal domain BKD09_RS10855 PF14841 FliG middle domain BKD09_RS10855 PF01706 FliG C-terminal domain BKD09_RS10860 PF01514 Secretory protein of YscJ/FliF family BKD09_RS10860 PF08345 Flagellar M-ring protein C-terminal BKD09_RS10870 PF03963 Flagellar hook capping protein - N-terminal region BKD09_RS10885 PF08241 Methyltransferase domain BKD09_RS10910 PF12833 Helix-turn-helix domain BKD09_RS10915 PF01209 ubiE/COQ5 methyltransferase family BKD09_RS10930 PF12833 Helix-turn-helix domain BKD09_RS10950 PF01068 ATP dependent DNA ligase domain BKD09_RS10950 PF04675 DNA ligase N terminus BKD09_RS10950 PF04679 ATP dependent DNA ligase C terminal region BKD09_RS10975 PF13191 AAA ATPase domain BKD09_RS10975 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS10980 PF00486 Transcriptional regulatory protein, C terminal BKD09_RS10980 PF00072 Response regulator receiver domain BKD09_RS11005 PF03466 LysR substrate binding domain BKD09_RS11005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS11010 PF03328 HpcH/HpaI aldolase/citrate lyase family BKD09_RS11015 PF02515 CoA-transferase family III BKD09_RS11030 PF13458 Periplasmic binding protein BKD09_RS11035 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS11045 PF00005 ABC transporter BKD09_RS11045 PF12399 Branched-chain amino acid ATP-binding cassette transporter BKD09_RS11050 PF00005 ABC transporter BKD09_RS11065 PF00561 alpha/beta hydrolase fold BKD09_RS11065 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus BKD09_RS11075 PF07690 Major Facilitator Superfamily BKD09_RS11085 PF07722 Peptidase C26 BKD09_RS11090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS11090 PF03466 LysR substrate binding domain BKD09_RS11110 PF02735 Ku70/Ku80 beta-barrel domain BKD09_RS11120 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS11130 PF12852 Cupin BKD09_RS11130 PF12833 Helix-turn-helix domain BKD09_RS11135 PF12833 Helix-turn-helix domain BKD09_RS11135 PF02311 AraC-like ligand binding domain BKD09_RS11140 PF00561 alpha/beta hydrolase fold BKD09_RS11155 PF07690 Major Facilitator Superfamily BKD09_RS11165 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BKD09_RS11170 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BKD09_RS11170 PF03625 Domain of unknown function DUF302 BKD09_RS11175 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS11200 PF00732 GMC oxidoreductase BKD09_RS11200 PF05199 GMC oxidoreductase BKD09_RS11205 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BKD09_RS11205 PF00034 Cytochrome c BKD09_RS11220 PF00664 ABC transporter transmembrane region BKD09_RS11220 PF00005 ABC transporter BKD09_RS11235 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS11235 PF00072 Response regulator receiver domain BKD09_RS11250 PF00743 Flavin-binding monooxygenase-like BKD09_RS11275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS11275 PF00072 Response regulator receiver domain BKD09_RS11275 PF13426 PAS domain BKD09_RS11290 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS11295 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS11305 PF00005 ABC transporter BKD09_RS11305 PF17912 MalK OB fold domain BKD09_RS11310 PF08402 TOBE domain BKD09_RS11310 PF00005 ABC transporter BKD09_RS11315 PF02734 DAK2 domain BKD09_RS11325 PF00381 PTS HPr component phosphorylation site BKD09_RS11330 PF02896 PEP-utilising enzyme, TIM barrel domain BKD09_RS11330 PF05524 PEP-utilising enzyme, N-terminal BKD09_RS11330 PF00391 PEP-utilising enzyme, mobile domain BKD09_RS11340 PF02733 Dak1 domain BKD09_RS11385 PF00596 Class II Aldolase and Adducin N-terminal domain BKD09_RS11395 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS11400 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS11405 PF00005 ABC transporter BKD09_RS11425 PF01590 GAF domain BKD09_RS11425 PF02954 Bacterial regulatory protein, Fis family BKD09_RS11425 PF00158 Sigma-54 interaction domain BKD09_RS11430 PF00107 Zinc-binding dehydrogenase BKD09_RS11430 PF08240 Alcohol dehydrogenase GroES-like domain BKD09_RS11445 PF02332 Methane/Phenol/Toluene Hydroxylase BKD09_RS11450 PF00175 Oxidoreductase NAD-binding domain BKD09_RS11450 PF00111 2Fe-2S iron-sulfur cluster binding domain BKD09_RS11450 PF00970 Oxidoreductase FAD-binding domain BKD09_RS11455 PF02332 Methane/Phenol/Toluene Hydroxylase BKD09_RS11475 PF00118 TCP-1/cpn60 chaperonin family BKD09_RS11480 PF00158 Sigma-54 interaction domain BKD09_RS11480 PF02954 Bacterial regulatory protein, Fis family BKD09_RS11480 PF01590 GAF domain BKD09_RS11500 PF13533 Biotin-lipoyl like BKD09_RS11510 PF03625 Domain of unknown function DUF302 BKD09_RS11510 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BKD09_RS11515 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BKD09_RS11530 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKD09_RS11545 PF00440 Bacterial regulatory proteins, tetR family BKD09_RS11550 PF01554 MatE BKD09_RS11560 PF03180 NLPA lipoprotein BKD09_RS11565 PF00296 Luciferase-like monooxygenase BKD09_RS11580 PF13458 Periplasmic binding protein BKD09_RS11585 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS11590 PF00005 ABC transporter BKD09_RS11590 PF12399 Branched-chain amino acid ATP-binding cassette transporter BKD09_RS11595 PF00005 ABC transporter BKD09_RS11600 PF03824 High-affinity nickel-transport protein BKD09_RS11605 PF00593 TonB dependent receptor BKD09_RS11605 PF07715 TonB-dependent Receptor Plug Domain BKD09_RS11605 PF07660 Secretin and TonB N terminus short domain BKD09_RS11625 PF01047 MarR family BKD09_RS11630 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BKD09_RS11630 PF18269 T3SS EscN ATPase C-terminal domain BKD09_RS11635 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BKD09_RS11635 PF00460 Flagella basal body rod protein BKD09_RS11645 PF01618 MotA/TolQ/ExbB proton channel family BKD09_RS11650 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BKD09_RS11650 PF02154 Flagellar motor switch protein FliM BKD09_RS11660 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BKD09_RS11665 PF14842 FliG N-terminal domain BKD09_RS11665 PF01706 FliG C-terminal domain BKD09_RS11665 PF14841 FliG middle domain BKD09_RS11670 PF01312 FlhB HrpN YscU SpaS Family BKD09_RS11675 PF00460 Flagella basal body rod protein BKD09_RS11680 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BKD09_RS11680 PF00460 Flagella basal body rod protein BKD09_RS11685 PF02049 Flagellar hook-basal body complex protein FliE BKD09_RS11690 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BKD09_RS11690 PF00460 Flagella basal body rod protein BKD09_RS11700 PF02119 Flagellar P-ring protein BKD09_RS11710 PF02107 Flagellar L-ring protein BKD09_RS11720 PF00813 FliP family BKD09_RS11725 PF00700 Bacterial flagellin C-terminal helical region BKD09_RS11725 PF00669 Bacterial flagellin N-terminal helical region BKD09_RS11730 PF00669 Bacterial flagellin N-terminal helical region BKD09_RS11730 PF00700 Bacterial flagellin C-terminal helical region BKD09_RS11735 PF00700 Bacterial flagellin C-terminal helical region BKD09_RS11735 PF00669 Bacterial flagellin N-terminal helical region BKD09_RS11740 PF01514 Secretory protein of YscJ/FliF family BKD09_RS11740 PF08345 Flagellar M-ring protein C-terminal BKD09_RS11750 PF00691 OmpA family BKD09_RS11750 PF13677 Membrane MotB of proton-channel complex MotA/MotB BKD09_RS11770 PF07559 Flagellar basal body protein FlaE BKD09_RS11770 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BKD09_RS11770 PF00460 Flagella basal body rod protein BKD09_RS11790 PF07378 Flagellar protein FlbT BKD09_RS11795 PF03963 Flagellar hook capping protein - N-terminal region BKD09_RS11795 PF13860 FlgD Ig-like domain BKD09_RS11795 PF13861 FlgD Tudor-like domain BKD09_RS11800 PF01313 Bacterial export proteins, family 3 BKD09_RS11805 PF00771 FHIPEP family BKD09_RS11810 PF01311 Bacterial export proteins, family 1 BKD09_RS11835 PF00486 Transcriptional regulatory protein, C terminal BKD09_RS11850 PF07690 Major Facilitator Superfamily BKD09_RS11855 PF01738 Dienelactone hydrolase family BKD09_RS11860 PF00144 Beta-lactamase BKD09_RS11870 PF13419 Haloacid dehalogenase-like hydrolase BKD09_RS11880 PF01232 Mannitol dehydrogenase Rossmann domain BKD09_RS11880 PF08125 Mannitol dehydrogenase C-terminal domain BKD09_RS11885 PF00392 Bacterial regulatory proteins, gntR family BKD09_RS11885 PF07729 FCD domain BKD09_RS11890 PF03480 Bacterial extracellular solute-binding protein, family 7 BKD09_RS11900 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BKD09_RS11905 PF08240 Alcohol dehydrogenase GroES-like domain BKD09_RS11905 PF00107 Zinc-binding dehydrogenase BKD09_RS11910 PF03786 D-mannonate dehydratase (UxuA) BKD09_RS11915 PF01070 FMN-dependent dehydrogenase BKD09_RS11920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS11920 PF03466 LysR substrate binding domain BKD09_RS11925 PF00005 ABC transporter BKD09_RS11925 PF08402 TOBE domain BKD09_RS11935 PF01266 FAD dependent oxidoreductase BKD09_RS11945 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS11950 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS11955 PF17938 Tetracyclin repressor-like, C-terminal domain BKD09_RS11955 PF00440 Bacterial regulatory proteins, tetR family BKD09_RS11960 PF00083 Sugar (and other) transporter BKD09_RS11960 PF07690 Major Facilitator Superfamily BKD09_RS11965 PF00135 Carboxylesterase family BKD09_RS11975 PF05199 GMC oxidoreductase BKD09_RS11975 PF00732 GMC oxidoreductase BKD09_RS11990 PF00005 ABC transporter BKD09_RS11995 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS12005 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BKD09_RS12005 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BKD09_RS12010 PF01042 Endoribonuclease L-PSP BKD09_RS12015 PF00155 Aminotransferase class I and II BKD09_RS12020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BKD09_RS12020 PF00205 Thiamine pyrophosphate enzyme, central domain BKD09_RS12020 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BKD09_RS12025 PF01266 FAD dependent oxidoreductase BKD09_RS12035 PF00392 Bacterial regulatory proteins, gntR family BKD09_RS12035 PF07729 FCD domain BKD09_RS12055 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS12060 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS12070 PF00356 Bacterial regulatory proteins, lacI family BKD09_RS12080 PF01614 Bacterial transcriptional regulator BKD09_RS12080 PF09339 IclR helix-turn-helix domain BKD09_RS12085 PF00890 FAD binding domain BKD09_RS12095 PF00083 Sugar (and other) transporter BKD09_RS12095 PF07690 Major Facilitator Superfamily BKD09_RS12105 PF03466 LysR substrate binding domain BKD09_RS12105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS12110 PF00375 Sodium:dicarboxylate symporter family BKD09_RS12115 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BKD09_RS12130 PF03401 Tripartite tricarboxylate transporter family receptor BKD09_RS12140 PF00561 alpha/beta hydrolase fold BKD09_RS12145 PF01557 Fumarylacetoacetate (FAA) hydrolase family BKD09_RS12165 PF03328 HpcH/HpaI aldolase/citrate lyase family BKD09_RS12170 PF01575 MaoC like domain BKD09_RS12175 PF02515 CoA-transferase family III BKD09_RS12190 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BKD09_RS12195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BKD09_RS12195 PF02770 Acyl-CoA dehydrogenase, middle domain BKD09_RS12195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BKD09_RS12200 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BKD09_RS12200 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BKD09_RS12205 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS12205 PF00501 AMP-binding enzyme BKD09_RS12230 PF00701 Dihydrodipicolinate synthetase family BKD09_RS12260 PF03814 Potassium-transporting ATPase A subunit BKD09_RS12270 PF02669 K+-transporting ATPase, c chain BKD09_RS12275 PF02702 Osmosensitive K+ channel His kinase sensor domain BKD09_RS12275 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS12275 PF13493 Domain of unknown function (DUF4118) BKD09_RS12275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS12275 PF13492 GAF domain BKD09_RS12280 PF00486 Transcriptional regulatory protein, C terminal BKD09_RS12280 PF00072 Response regulator receiver domain BKD09_RS12285 PF02735 Ku70/Ku80 beta-barrel domain BKD09_RS12290 PF01068 ATP dependent DNA ligase domain BKD09_RS12290 PF04679 ATP dependent DNA ligase C terminal region BKD09_RS12290 PF13298 DNA polymerase Ligase (LigD) BKD09_RS12305 PF00128 Alpha amylase, catalytic domain BKD09_RS12310 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BKD09_RS12310 PF00128 Alpha amylase, catalytic domain BKD09_RS12310 PF11941 Domain of unknown function (DUF3459) BKD09_RS12315 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BKD09_RS12315 PF00128 Alpha amylase, catalytic domain BKD09_RS12320 PF02806 Alpha amylase, C-terminal all-beta domain BKD09_RS12320 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BKD09_RS12320 PF00128 Alpha amylase, catalytic domain BKD09_RS12325 PF16657 Maltogenic Amylase, C-terminal domain BKD09_RS12325 PF00128 Alpha amylase, catalytic domain BKD09_RS12330 PF11896 Domain of unknown function (DUF3416) BKD09_RS12330 PF00128 Alpha amylase, catalytic domain BKD09_RS12335 PF02446 4-alpha-glucanotransferase BKD09_RS12340 PF00723 Glycosyl hydrolases family 15 BKD09_RS12355 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BKD09_RS12360 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BKD09_RS12360 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BKD09_RS12365 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BKD09_RS12365 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BKD09_RS12370 PF00923 Transaldolase/Fructose-6-phosphate aldolase BKD09_RS12380 PF06798 PrkA serine protein kinase C-terminal domain BKD09_RS12380 PF08298 PrkA AAA domain BKD09_RS12385 PF04285 Protein of unknown function (DUF444) BKD09_RS12390 PF04293 SpoVR like protein BKD09_RS12430 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS12440 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BKD09_RS12445 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BKD09_RS12445 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BKD09_RS12445 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BKD09_RS12450 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BKD09_RS12450 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKD09_RS12450 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BKD09_RS12460 PF00561 alpha/beta hydrolase fold BKD09_RS12465 PF13186 Iron-sulfur cluster-binding domain BKD09_RS12465 PF04055 Radical SAM superfamily BKD09_RS12470 PF05402 Coenzyme PQQ synthesis protein D (PqqD) BKD09_RS12475 PF03070 TENA/THI-4/PQQC family BKD09_RS12480 PF12706 Beta-lactamase superfamily domain BKD09_RS12485 PF08042 PqqA family BKD09_RS12495 PF01425 Amidase BKD09_RS12500 PF00255 Glutathione peroxidase BKD09_RS12510 PF13378 Enolase C-terminal domain-like BKD09_RS12515 PF04235 Protein of unknown function (DUF418) BKD09_RS12540 PF00873 AcrB/AcrD/AcrF family BKD09_RS12545 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BKD09_RS12565 PF04185 Phosphoesterase family BKD09_RS12570 PF03150 Di-haem cytochrome c peroxidase BKD09_RS12580 PF00890 FAD binding domain BKD09_RS12580 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) BKD09_RS12590 PF12833 Helix-turn-helix domain BKD09_RS12590 PF14525 AraC-binding-like domain BKD09_RS12595 PF00072 Response regulator receiver domain BKD09_RS12595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS12595 PF13188 PAS domain BKD09_RS12595 PF08448 PAS fold BKD09_RS12595 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS12605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKD09_RS12610 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS12615 PF12911 N-terminal TM domain of oligopeptide transport permease C BKD09_RS12615 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS12620 PF01266 FAD dependent oxidoreductase BKD09_RS12620 PF16350 FAD dependent oxidoreductase central domain BKD09_RS12620 PF01571 Aminomethyltransferase folate-binding domain BKD09_RS12620 PF08669 Glycine cleavage T-protein C-terminal barrel domain BKD09_RS12625 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BKD09_RS12630 PF00005 ABC transporter BKD09_RS12630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKD09_RS12635 PF12833 Helix-turn-helix domain BKD09_RS12635 PF14525 AraC-binding-like domain BKD09_RS12645 PF13191 AAA ATPase domain BKD09_RS12645 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS12670 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BKD09_RS12670 PF13378 Enolase C-terminal domain-like BKD09_RS12675 PF12833 Helix-turn-helix domain BKD09_RS12675 PF06445 GyrI-like small molecule binding domain BKD09_RS12680 PF08450 SMP-30/Gluconolactonase/LRE-like region BKD09_RS12690 PF05199 GMC oxidoreductase BKD09_RS12690 PF00732 GMC oxidoreductase BKD09_RS12700 PF01434 Peptidase family M41 BKD09_RS12700 PF17862 AAA+ lid domain BKD09_RS12700 PF00004 ATPase family associated with various cellular activities (AAA) BKD09_RS12715 PF00581 Rhodanese-like domain BKD09_RS12720 PF00581 Rhodanese-like domain BKD09_RS12730 PF03734 L,D-transpeptidase catalytic domain BKD09_RS12730 PF01476 LysM domain BKD09_RS12735 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BKD09_RS12735 PF01842 ACT domain BKD09_RS12735 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BKD09_RS12745 PF12848 ABC transporter BKD09_RS12745 PF00005 ABC transporter BKD09_RS12775 PF00210 Ferritin-like domain BKD09_RS12785 PF05922 Peptidase inhibitor I9 BKD09_RS12785 PF00082 Subtilase family BKD09_RS12805 PF00561 alpha/beta hydrolase fold BKD09_RS12825 PF00158 Sigma-54 interaction domain BKD09_RS12825 PF02954 Bacterial regulatory protein, Fis family BKD09_RS12850 PF01042 Endoribonuclease L-PSP BKD09_RS12870 PF00043 Glutathione S-transferase, C-terminal domain BKD09_RS12870 PF02798 Glutathione S-transferase, N-terminal domain BKD09_RS12880 PF00106 short chain dehydrogenase BKD09_RS12885 PF03167 Uracil DNA glycosylase superfamily BKD09_RS12895 PF13667 ThiC-associated domain BKD09_RS12895 PF01964 Radical SAM ThiC family BKD09_RS12900 PF02581 Thiamine monophosphate synthase BKD09_RS12905 PF05690 Thiazole biosynthesis protein ThiG BKD09_RS12915 PF01266 FAD dependent oxidoreductase BKD09_RS12930 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS12930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS12930 PF00672 HAMP domain BKD09_RS12935 PF00072 Response regulator receiver domain BKD09_RS12935 PF00486 Transcriptional regulatory protein, C terminal BKD09_RS12955 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS12960 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS12970 PF08402 TOBE domain BKD09_RS12970 PF00005 ABC transporter BKD09_RS13005 PF01037 Lrp/AsnC ligand binding domain BKD09_RS13015 PF00034 Cytochrome c BKD09_RS13020 PF01476 LysM domain BKD09_RS13020 PF17969 L,D-transpeptidase C-terminal domain BKD09_RS13020 PF03734 L,D-transpeptidase catalytic domain BKD09_RS13025 PF13439 Glycosyltransferase Family 4 BKD09_RS13025 PF00534 Glycosyl transferases group 1 BKD09_RS13030 PF08241 Methyltransferase domain BKD09_RS13040 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS13040 PF16197 Ketoacyl-synthetase C-terminal extension BKD09_RS13040 PF00550 Phosphopantetheine attachment site BKD09_RS13040 PF02801 Beta-ketoacyl synthase, C-terminal domain BKD09_RS13040 PF00668 Condensation domain BKD09_RS13040 PF00109 Beta-ketoacyl synthase, N-terminal domain BKD09_RS13040 PF00202 Aminotransferase class-III BKD09_RS13040 PF00501 AMP-binding enzyme BKD09_RS13045 PF02666 Phosphatidylserine decarboxylase BKD09_RS13050 PF00293 NUDIX domain BKD09_RS13050 PF00300 Histidine phosphatase superfamily (branch 1) BKD09_RS13095 PF00440 Bacterial regulatory proteins, tetR family BKD09_RS13095 PF08361 MAATS-type transcriptional repressor, C-terminal region BKD09_RS13100 PF13533 Biotin-lipoyl like BKD09_RS13105 PF07690 Major Facilitator Superfamily BKD09_RS13110 PF00664 ABC transporter transmembrane region BKD09_RS13110 PF00005 ABC transporter BKD09_RS13135 PF00155 Aminotransferase class I and II BKD09_RS13135 PF00392 Bacterial regulatory proteins, gntR family BKD09_RS13145 PF00561 alpha/beta hydrolase fold BKD09_RS13155 PF03795 YCII-related domain BKD09_RS13160 PF03795 YCII-related domain BKD09_RS13165 PF04542 Sigma-70 region 2 BKD09_RS13165 PF08281 Sigma-70, region 4 BKD09_RS13170 PF01510 N-acetylmuramoyl-L-alanine amidase BKD09_RS13175 PF01795 MraW methylase family BKD09_RS13185 PF03717 Penicillin-binding Protein dimerisation domain BKD09_RS13185 PF00905 Penicillin binding protein transpeptidase domain BKD09_RS13190 PF01225 Mur ligase family, catalytic domain BKD09_RS13190 PF08245 Mur ligase middle domain BKD09_RS13190 PF02875 Mur ligase family, glutamate ligase domain BKD09_RS13195 PF01225 Mur ligase family, catalytic domain BKD09_RS13195 PF08245 Mur ligase middle domain BKD09_RS13195 PF02875 Mur ligase family, glutamate ligase domain BKD09_RS13200 PF00953 Glycosyl transferase family 4 BKD09_RS13200 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BKD09_RS13205 PF08245 Mur ligase middle domain BKD09_RS13205 PF02875 Mur ligase family, glutamate ligase domain BKD09_RS13205 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BKD09_RS13215 PF01098 Cell cycle protein BKD09_RS13220 PF04101 Glycosyltransferase family 28 C-terminal domain BKD09_RS13220 PF03033 Glycosyltransferase family 28 N-terminal domain BKD09_RS13225 PF01225 Mur ligase family, catalytic domain BKD09_RS13225 PF08245 Mur ligase middle domain BKD09_RS13225 PF02875 Mur ligase family, glutamate ligase domain BKD09_RS13230 PF01565 FAD binding domain BKD09_RS13230 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BKD09_RS13235 PF01820 D-ala D-ala ligase N-terminus BKD09_RS13235 PF07478 D-ala D-ala ligase C-terminus BKD09_RS13240 PF08478 POTRA domain, FtsQ-type BKD09_RS13240 PF03799 Cell division protein FtsQ BKD09_RS13245 PF02491 SHS2 domain inserted in FTSA BKD09_RS13250 PF12327 FtsZ family, C-terminal domain BKD09_RS13250 PF00091 Tubulin/FtsZ family, GTPase domain BKD09_RS13255 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BKD09_RS13260 PF13525 Outer membrane lipoprotein BKD09_RS13265 PF02463 RecF/RecN/SMC N terminal domain BKD09_RS13270 PF12826 Helix-hairpin-helix motif BKD09_RS13270 PF03120 NAD-dependent DNA ligase OB-fold domain BKD09_RS13270 PF00533 BRCA1 C Terminus (BRCT) domain BKD09_RS13270 PF01653 NAD-dependent DNA ligase adenylation domain BKD09_RS13275 PF07690 Major Facilitator Superfamily BKD09_RS13280 PF00557 Metallopeptidase family M24 BKD09_RS13280 PF01321 Creatinase/Prolidase N-terminal domain BKD09_RS13280 PF00557 Metallopeptidase family M24 BKD09_RS13280 PF01321 Creatinase/Prolidase N-terminal domain BKD09_RS13315 PF03009 Glycerophosphoryl diester phosphodiesterase family BKD09_RS13335 PF01061 ABC-2 type transporter BKD09_RS13340 PF00005 ABC transporter BKD09_RS13350 PF00067 Cytochrome P450 BKD09_RS13390 PF00180 Isocitrate/isopropylmalate dehydrogenase BKD09_RS13395 PF07690 Major Facilitator Superfamily BKD09_RS13400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS13400 PF03466 LysR substrate binding domain BKD09_RS13405 PF03447 Homoserine dehydrogenase, NAD binding domain BKD09_RS13405 PF01958 Domain of unknown function DUF108 BKD09_RS13410 PF07995 Glucose / Sorbosone dehydrogenase BKD09_RS13440 PF16363 GDP-mannose 4,6 dehydratase BKD09_RS13450 PF05736 OprF membrane domain BKD09_RS13450 PF00691 OmpA family BKD09_RS13465 PF00580 UvrD/REP helicase N-terminal domain BKD09_RS13465 PF13361 UvrD-like helicase C-terminal domain BKD09_RS13470 PF07043 Protein of unknown function (DUF1328) BKD09_RS13480 PF02913 FAD linked oxidases, C-terminal domain BKD09_RS13480 PF01565 FAD binding domain BKD09_RS13495 PF03459 TOBE domain BKD09_RS13495 PF17912 MalK OB fold domain BKD09_RS13495 PF00005 ABC transporter BKD09_RS13500 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS13505 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS13515 PF01740 STAS domain BKD09_RS13515 PF00916 Sulfate permease family BKD09_RS13525 PF03480 Bacterial extracellular solute-binding protein, family 7 BKD09_RS13530 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BKD09_RS13535 PF01842 ACT domain BKD09_RS13535 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BKD09_RS13535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BKD09_RS13545 PF13188 PAS domain BKD09_RS13545 PF00990 Diguanylate cyclase, GGDEF domain BKD09_RS13545 PF03707 Bacterial signalling protein N terminal repeat BKD09_RS13545 PF00563 EAL domain BKD09_RS13550 PF07690 Major Facilitator Superfamily BKD09_RS13555 PF00563 EAL domain BKD09_RS13555 PF13426 PAS domain BKD09_RS13555 PF00990 Diguanylate cyclase, GGDEF domain BKD09_RS13565 PF00753 Metallo-beta-lactamase superfamily BKD09_RS13565 PF16123 Hydroxyacylglutathione hydrolase C-terminus BKD09_RS13570 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKD09_RS13585 PF00067 Cytochrome P450 BKD09_RS13605 PF07690 Major Facilitator Superfamily BKD09_RS13615 PF00440 Bacterial regulatory proteins, tetR family BKD09_RS13620 PF00582 Universal stress protein family BKD09_RS13630 PF13302 Acetyltransferase (GNAT) domain BKD09_RS13630 PF13673 Acetyltransferase (GNAT) domain BKD09_RS13630 PF00117 Glutamine amidotransferase class-I BKD09_RS13630 PF00958 GMP synthase C terminal domain BKD09_RS13630 PF03352 Methyladenine glycosylase BKD09_RS13635 PF08448 PAS fold BKD09_RS13635 PF00072 Response regulator receiver domain BKD09_RS13635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS13635 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS13635 PF13188 PAS domain BKD09_RS13640 PF06745 KaiC BKD09_RS13655 PF07664 Ferrous iron transport protein B C terminus BKD09_RS13655 PF07670 Nucleoside recognition BKD09_RS13655 PF02421 Ferrous iron transport protein B BKD09_RS13675 PF10415 Fumarase C C-terminus BKD09_RS13675 PF00206 Lyase BKD09_RS13695 PF02417 Chromate transporter BKD09_RS13705 PF01970 Tripartite tricarboxylate transporter TctA family BKD09_RS13710 PF03401 Tripartite tricarboxylate transporter family receptor BKD09_RS13715 PF00303 Thymidylate synthase BKD09_RS13725 PF00186 Dihydrofolate reductase BKD09_RS13730 PF01145 SPFH domain / Band 7 family BKD09_RS13735 PF01145 SPFH domain / Band 7 family BKD09_RS13745 PF13180 PDZ domain BKD09_RS13750 PF18429 Domain of unknown function (DUF5609) BKD09_RS13760 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BKD09_RS13760 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BKD09_RS13760 PF00205 Thiamine pyrophosphate enzyme, central domain BKD09_RS13765 PF00291 Pyridoxal-phosphate dependent enzyme BKD09_RS13770 PF10369 Small subunit of acetolactate synthase BKD09_RS13775 PF05175 Methyltransferase small domain BKD09_RS13785 PF01810 LysE type translocator BKD09_RS13790 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BKD09_RS13790 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BKD09_RS13795 PF00106 short chain dehydrogenase BKD09_RS13815 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS13820 PF00005 ABC transporter BKD09_RS13820 PF00571 CBS domain BKD09_RS13825 PF00005 ABC transporter BKD09_RS13830 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS13845 PF08281 Sigma-70, region 4 BKD09_RS13845 PF04542 Sigma-70 region 2 BKD09_RS13875 PF00005 ABC transporter BKD09_RS13875 PF12399 Branched-chain amino acid ATP-binding cassette transporter BKD09_RS13880 PF00005 ABC transporter BKD09_RS13895 PF03976 Polyphosphate kinase 2 (PPK2) BKD09_RS13920 PF00924 Mechanosensitive ion channel BKD09_RS13925 PF03401 Tripartite tricarboxylate transporter family receptor BKD09_RS13930 PF00390 Malic enzyme, N-terminal domain BKD09_RS13930 PF03949 Malic enzyme, NAD binding domain BKD09_RS13945 PF00144 Beta-lactamase BKD09_RS13965 PF03330 Lytic transglycolase BKD09_RS13990 PF00135 Carboxylesterase family BKD09_RS14000 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BKD09_RS14015 PF14437 MafB19-like deaminase BKD09_RS14020 PF04193 PQ loop repeat BKD09_RS14025 PF08323 Starch synthase catalytic domain BKD09_RS14025 PF00534 Glycosyl transferases group 1 BKD09_RS14030 PF00483 Nucleotidyl transferase BKD09_RS14040 PF09084 NMT1/THI5 like BKD09_RS14055 PF00005 ABC transporter BKD09_RS14060 PF02770 Acyl-CoA dehydrogenase, middle domain BKD09_RS14060 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BKD09_RS14060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BKD09_RS14065 PF00296 Luciferase-like monooxygenase BKD09_RS14070 PF09084 NMT1/THI5 like BKD09_RS14080 PF03330 Lytic transglycolase BKD09_RS14085 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BKD09_RS14085 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BKD09_RS14095 PF13458 Periplasmic binding protein BKD09_RS14100 PF00891 O-methyltransferase domain BKD09_RS14110 PF00005 ABC transporter BKD09_RS14120 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS14125 PF13458 Periplasmic binding protein BKD09_RS14130 PF01266 FAD dependent oxidoreductase BKD09_RS14150 PF00682 HMGL-like BKD09_RS14150 PF08502 LeuA allosteric (dimerisation) domain BKD09_RS14155 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BKD09_RS14165 PF03480 Bacterial extracellular solute-binding protein, family 7 BKD09_RS14220 PF06480 FtsH Extracellular BKD09_RS14220 PF01434 Peptidase family M41 BKD09_RS14220 PF00004 ATPase family associated with various cellular activities (AAA) BKD09_RS14220 PF17862 AAA+ lid domain BKD09_RS14225 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BKD09_RS14225 PF01842 ACT domain BKD09_RS14225 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BKD09_RS14255 PF11798 IMS family HHH motif BKD09_RS14255 PF11799 impB/mucB/samB family C-terminal domain BKD09_RS14255 PF00817 impB/mucB/samB family BKD09_RS14275 PF02735 Ku70/Ku80 beta-barrel domain BKD09_RS14295 PF13362 Toprim domain BKD09_RS14295 PF18818 Metallopeptidase superfamily domain BKD09_RS14295 PF08401 Domain of unknown function (DUF1738) BKD09_RS14325 PF05284 Protein of unknown function (DUF736) BKD09_RS14330 PF01381 Helix-turn-helix BKD09_RS14365 PF10502 Signal peptidase, peptidase S26 BKD09_RS14370 PF10145 Phage-related minor tail protein BKD09_RS14370 PF01464 Transglycosylase SLT domain BKD09_RS14370 PF01551 Peptidase family M23 BKD09_RS14380 PF02534 Type IV secretory system Conjugative DNA transfer BKD09_RS14385 PF01464 Transglycosylase SLT domain BKD09_RS14385 PF10145 Phage-related minor tail protein BKD09_RS14385 PF01551 Peptidase family M23 BKD09_RS14395 PF00589 Phage integrase family BKD09_RS14395 PF02899 Phage integrase, N-terminal SAM-like domain BKD09_RS14415 PF00011 Hsp20/alpha crystallin family BKD09_RS14465 PF00486 Transcriptional regulatory protein, C terminal BKD09_RS14465 PF00072 Response regulator receiver domain BKD09_RS14495 PF13340 Putative transposase of IS4/5 family (DUF4096) BKD09_RS14520 PF00072 Response regulator receiver domain BKD09_RS14520 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS14570 PF01594 AI-2E family transporter BKD09_RS14585 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS14585 PF00072 Response regulator receiver domain BKD09_RS14590 PF05231 MASE1 BKD09_RS14590 PF07730 Histidine kinase BKD09_RS14590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS14650 PF04349 Periplasmic glucan biosynthesis protein, MdoG BKD09_RS14655 PF13632 Glycosyl transferase family group 2 BKD09_RS14665 PF10503 Esterase PHB depolymerase BKD09_RS14670 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS14670 PF08446 PAS fold BKD09_RS14670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS14670 PF01590 GAF domain BKD09_RS14670 PF00360 Phytochrome region BKD09_RS14675 PF12697 Alpha/beta hydrolase family BKD09_RS14695 PF01569 PAP2 superfamily BKD09_RS14720 PF05974 Domain of unknown function (DUF892) BKD09_RS14735 PF00107 Zinc-binding dehydrogenase BKD09_RS14735 PF13823 Alcohol dehydrogenase GroES-associated BKD09_RS14735 PF08240 Alcohol dehydrogenase GroES-like domain BKD09_RS14740 PF00106 short chain dehydrogenase BKD09_RS14830 PF13439 Glycosyltransferase Family 4 BKD09_RS14830 PF00534 Glycosyl transferases group 1 BKD09_RS14845 PF04226 Transglycosylase associated protein BKD09_RS14865 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BKD09_RS14865 PF00205 Thiamine pyrophosphate enzyme, central domain BKD09_RS14865 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BKD09_RS14870 PF00248 Aldo/keto reductase family BKD09_RS14875 PF17755 UvrA DNA-binding domain BKD09_RS14935 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS14935 PF00072 Response regulator receiver domain BKD09_RS14970 PF04966 Carbohydrate-selective porin, OprB family BKD09_RS15015 PF00313 'Cold-shock' DNA-binding domain BKD09_RS15030 PF03631 Virulence factor BrkB BKD09_RS15045 PF05974 Domain of unknown function (DUF892) BKD09_RS15050 PF01594 AI-2E family transporter BKD09_RS15085 PF00011 Hsp20/alpha crystallin family BKD09_RS15150 PF00672 HAMP domain BKD09_RS15150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS15150 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS15220 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS15220 PF00072 Response regulator receiver domain BKD09_RS15225 PF00989 PAS fold BKD09_RS15225 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS15225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS15250 PF17755 UvrA DNA-binding domain BKD09_RS15260 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS15265 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BKD09_RS15265 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BKD09_RS15270 PF00941 FAD binding domain in molybdopterin dehydrogenase BKD09_RS15270 PF03450 CO dehydrogenase flavoprotein C-terminal domain BKD09_RS15275 PF10518 TAT (twin-arginine translocation) pathway signal sequence BKD09_RS15275 PF01799 [2Fe-2S] binding domain BKD09_RS15275 PF00111 2Fe-2S iron-sulfur cluster binding domain BKD09_RS15280 PF10431 C-terminal, D2-small domain, of ClpB protein BKD09_RS15280 PF17871 AAA lid domain BKD09_RS15280 PF00004 ATPase family associated with various cellular activities (AAA) BKD09_RS15280 PF02861 Clp amino terminal domain, pathogenicity island component BKD09_RS15280 PF07724 AAA domain (Cdc48 subfamily) BKD09_RS15285 PF00171 Aldehyde dehydrogenase family BKD09_RS15290 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKD09_RS15300 PF00248 Aldo/keto reductase family BKD09_RS15305 PF00085 Thioredoxin BKD09_RS15320 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BKD09_RS15320 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BKD09_RS15325 PF00941 FAD binding domain in molybdopterin dehydrogenase BKD09_RS15325 PF03450 CO dehydrogenase flavoprotein C-terminal domain BKD09_RS15330 PF00111 2Fe-2S iron-sulfur cluster binding domain BKD09_RS15330 PF01799 [2Fe-2S] binding domain BKD09_RS15330 PF10518 TAT (twin-arginine translocation) pathway signal sequence BKD09_RS15335 PF00210 Ferritin-like domain BKD09_RS15355 PF13581 Histidine kinase-like ATPase domain BKD09_RS15355 PF13426 PAS domain BKD09_RS15355 PF07536 HWE histidine kinase BKD09_RS15370 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BKD09_RS15390 PF00226 DnaJ domain BKD09_RS15390 PF01556 DnaJ C terminal domain BKD09_RS15390 PF00684 DnaJ central domain BKD09_RS15395 PF01025 GrpE BKD09_RS15400 PF00012 Hsp70 protein BKD09_RS15405 PF00011 Hsp20/alpha crystallin family BKD09_RS15425 PF00027 Cyclic nucleotide-binding domain BKD09_RS15425 PF13545 Crp-like helix-turn-helix domain BKD09_RS15430 PF01965 DJ-1/PfpI family BKD09_RS15450 PF14765 Polyketide synthase dehydratase BKD09_RS15450 PF00550 Phosphopantetheine attachment site BKD09_RS15450 PF08659 KR domain BKD09_RS15450 PF02801 Beta-ketoacyl synthase, C-terminal domain BKD09_RS15450 PF00109 Beta-ketoacyl synthase, N-terminal domain BKD09_RS15450 PF16197 Ketoacyl-synthetase C-terminal extension BKD09_RS15450 PF00107 Zinc-binding dehydrogenase BKD09_RS15450 PF08240 Alcohol dehydrogenase GroES-like domain BKD09_RS15450 PF00698 Acyl transferase domain BKD09_RS15460 PF01594 AI-2E family transporter BKD09_RS15500 PF00056 lactate/malate dehydrogenase, NAD binding domain BKD09_RS15500 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BKD09_RS15505 PF00072 Response regulator receiver domain BKD09_RS15505 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS15515 PF00107 Zinc-binding dehydrogenase BKD09_RS15515 PF08240 Alcohol dehydrogenase GroES-like domain BKD09_RS15555 PF00011 Hsp20/alpha crystallin family BKD09_RS15580 PF00118 TCP-1/cpn60 chaperonin family BKD09_RS15585 PF00166 Chaperonin 10 Kd subunit BKD09_RS15590 PF17269 Family of unknown function (DUF5335) BKD09_RS15600 PF00004 ATPase family associated with various cellular activities (AAA) BKD09_RS15600 PF02190 ATP-dependent protease La (LON) substrate-binding domain BKD09_RS15600 PF05362 Lon protease (S16) C-terminal proteolytic domain BKD09_RS15615 PF07995 Glucose / Sorbosone dehydrogenase BKD09_RS15625 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BKD09_RS15625 PF00205 Thiamine pyrophosphate enzyme, central domain BKD09_RS15625 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BKD09_RS15640 PF00582 Universal stress protein family BKD09_RS15660 PF00171 Aldehyde dehydrogenase family BKD09_RS15665 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BKD09_RS15665 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BKD09_RS15670 PF02705 K+ potassium transporter BKD09_RS15705 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BKD09_RS15705 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BKD09_RS15730 PF01027 Inhibitor of apoptosis-promoting Bax1 BKD09_RS15735 PF00296 Luciferase-like monooxygenase BKD09_RS15745 PF04545 Sigma-70, region 4 BKD09_RS15745 PF04542 Sigma-70 region 2 BKD09_RS15745 PF00140 Sigma-70 factor, region 1.2 BKD09_RS15755 PF00011 Hsp20/alpha crystallin family BKD09_RS15760 PF00166 Chaperonin 10 Kd subunit BKD09_RS15765 PF00118 TCP-1/cpn60 chaperonin family BKD09_RS15780 PF00011 Hsp20/alpha crystallin family BKD09_RS15785 PF00011 Hsp20/alpha crystallin family BKD09_RS15795 PF13180 PDZ domain BKD09_RS15795 PF00595 PDZ domain BKD09_RS15800 PF03466 LysR substrate binding domain BKD09_RS15800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS15805 PF04303 PrpF protein BKD09_RS15810 PF00375 Sodium:dicarboxylate symporter family BKD09_RS15820 PF00561 alpha/beta hydrolase fold BKD09_RS15860 PF01569 PAP2 superfamily BKD09_RS15865 PF00857 Isochorismatase family BKD09_RS15870 PF00719 Inorganic pyrophosphatase BKD09_RS15875 PF05974 Domain of unknown function (DUF892) BKD09_RS15880 PF00355 Rieske [2Fe-2S] domain BKD09_RS15880 PF01266 FAD dependent oxidoreductase BKD09_RS15885 PF01266 FAD dependent oxidoreductase BKD09_RS15885 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BKD09_RS15920 PF00534 Glycosyl transferases group 1 BKD09_RS15920 PF13439 Glycosyltransferase Family 4 BKD09_RS15930 PF10503 Esterase PHB depolymerase BKD09_RS15935 PF00072 Response regulator receiver domain BKD09_RS15935 PF03861 ANTAR domain BKD09_RS15950 PF00011 Hsp20/alpha crystallin family BKD09_RS15955 PF00011 Hsp20/alpha crystallin family BKD09_RS15985 PF03861 ANTAR domain BKD09_RS15985 PF00072 Response regulator receiver domain BKD09_RS16035 PF01351 Ribonuclease HII BKD09_RS16110 PF00011 Hsp20/alpha crystallin family BKD09_RS16160 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS16160 PF13191 AAA ATPase domain BKD09_RS16165 PF01548 Transposase BKD09_RS16165 PF02371 Transposase IS116/IS110/IS902 family BKD09_RS16175 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS16180 PF00665 Integrase core domain BKD09_RS16185 PF01695 IstB-like ATP binding protein BKD09_RS16215 PF01594 AI-2E family transporter BKD09_RS16245 PF14659 Phage integrase, N-terminal SAM-like domain BKD09_RS16245 PF00589 Phage integrase family BKD09_RS16295 PF13426 PAS domain BKD09_RS16295 PF13581 Histidine kinase-like ATPase domain BKD09_RS16295 PF07568 Histidine kinase BKD09_RS16300 PF03330 Lytic transglycolase BKD09_RS16315 PF05974 Domain of unknown function (DUF892) BKD09_RS16335 PF03631 Virulence factor BrkB BKD09_RS16350 PF01569 PAP2 superfamily BKD09_RS16420 PF00011 Hsp20/alpha crystallin family BKD09_RS16425 PF04679 ATP dependent DNA ligase C terminal region BKD09_RS16425 PF01068 ATP dependent DNA ligase domain BKD09_RS16425 PF04675 DNA ligase N terminus BKD09_RS16485 PF00027 Cyclic nucleotide-binding domain BKD09_RS16485 PF13545 Crp-like helix-turn-helix domain BKD09_RS16595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS16595 PF03466 LysR substrate binding domain BKD09_RS16600 PF04303 PrpF protein BKD09_RS16605 PF00375 Sodium:dicarboxylate symporter family BKD09_RS16615 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BKD09_RS16625 PF00171 Aldehyde dehydrogenase family BKD09_RS16635 PF00202 Aminotransferase class-III BKD09_RS16640 PF01037 Lrp/AsnC ligand binding domain BKD09_RS16645 PF01266 FAD dependent oxidoreductase BKD09_RS16650 PF00005 ABC transporter BKD09_RS16650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKD09_RS16655 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKD09_RS16660 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS16665 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS16665 PF12911 N-terminal TM domain of oligopeptide transport permease C BKD09_RS16670 PF01134 Glucose inhibited division protein A BKD09_RS16670 PF13932 GidA associated domain BKD09_RS16675 PF14821 Threonine synthase N terminus BKD09_RS16675 PF00291 Pyridoxal-phosphate dependent enzyme BKD09_RS16680 PF01636 Phosphotransferase enzyme family BKD09_RS16685 PF00155 Aminotransferase class I and II BKD09_RS16690 PF00107 Zinc-binding dehydrogenase BKD09_RS16690 PF08240 Alcohol dehydrogenase GroES-like domain BKD09_RS16700 PF01168 Alanine racemase, N-terminal domain BKD09_RS16700 PF14031 Putative serine dehydratase domain BKD09_RS16705 PF00171 Aldehyde dehydrogenase family BKD09_RS16710 PF01266 FAD dependent oxidoreductase BKD09_RS16715 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BKD09_RS16715 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BKD09_RS16720 PF02913 FAD linked oxidases, C-terminal domain BKD09_RS16720 PF01565 FAD binding domain BKD09_RS16725 PF00375 Sodium:dicarboxylate symporter family BKD09_RS16740 PF04909 Amidohydrolase BKD09_RS16745 PF07690 Major Facilitator Superfamily BKD09_RS16750 PF00561 alpha/beta hydrolase fold BKD09_RS16755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS16755 PF03466 LysR substrate binding domain BKD09_RS16765 PF00378 Enoyl-CoA hydratase/isomerase BKD09_RS16770 PF13607 Succinyl-CoA ligase like flavodoxin domain BKD09_RS16770 PF13380 CoA binding domain BKD09_RS16775 PF00939 Sodium:sulfate symporter transmembrane region BKD09_RS16780 PF07690 Major Facilitator Superfamily BKD09_RS16790 PF01557 Fumarylacetoacetate (FAA) hydrolase family BKD09_RS16795 PF03466 LysR substrate binding domain BKD09_RS16795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS16800 PF13407 Periplasmic binding protein domain BKD09_RS16805 PF00005 ABC transporter BKD09_RS16810 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS16815 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS16830 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BKD09_RS16830 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BKD09_RS16850 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BKD09_RS16850 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKD09_RS16865 PF03466 LysR substrate binding domain BKD09_RS16865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS16900 PF05114 Protein of unknown function (DUF692) BKD09_RS16910 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS16910 PF02743 Cache domain BKD09_RS16910 PF00672 HAMP domain BKD09_RS16920 PF07690 Major Facilitator Superfamily BKD09_RS16930 PF07730 Histidine kinase BKD09_RS16930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS16930 PF00672 HAMP domain BKD09_RS16935 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS16935 PF00072 Response regulator receiver domain BKD09_RS16940 PF00873 AcrB/AcrD/AcrF family BKD09_RS16945 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BKD09_RS16960 PF01594 AI-2E family transporter BKD09_RS16975 PF01027 Inhibitor of apoptosis-promoting Bax1 BKD09_RS16985 PF00361 Proton-conducting membrane transporter BKD09_RS16990 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BKD09_RS17000 PF03334 Na+/H+ antiporter subunit BKD09_RS17015 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BKD09_RS17020 PF00873 AcrB/AcrD/AcrF family BKD09_RS17025 PF02080 TrkA-C domain BKD09_RS17025 PF03600 Citrate transporter BKD09_RS17030 PF03600 Citrate transporter BKD09_RS17030 PF02080 TrkA-C domain BKD09_RS17035 PF01546 Peptidase family M20/M25/M40 BKD09_RS17035 PF07687 Peptidase dimerisation domain BKD09_RS17045 PF04960 Glutaminase BKD09_RS17050 PF03806 AbgT putative transporter family BKD09_RS17060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS17060 PF07730 Histidine kinase BKD09_RS17060 PF05384 Sensor protein DegS BKD09_RS17065 PF00072 Response regulator receiver domain BKD09_RS17065 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS17080 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BKD09_RS17080 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BKD09_RS17085 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BKD09_RS17085 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BKD09_RS17095 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BKD09_RS17105 PF01547 Bacterial extracellular solute-binding protein BKD09_RS17110 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS17115 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS17120 PF03070 TENA/THI-4/PQQC family BKD09_RS17145 PF07298 NnrU protein BKD09_RS17165 PF02310 B12 binding domain BKD09_RS17165 PF13282 Domain of unknown function (DUF4070) BKD09_RS17165 PF04055 Radical SAM superfamily BKD09_RS17205 PF10119 Predicted methyltransferase regulatory domain BKD09_RS17205 PF13847 Methyltransferase domain BKD09_RS17210 PF10431 C-terminal, D2-small domain, of ClpB protein BKD09_RS17210 PF17871 AAA lid domain BKD09_RS17210 PF07724 AAA domain (Cdc48 subfamily) BKD09_RS17210 PF00004 ATPase family associated with various cellular activities (AAA) BKD09_RS17220 PF05947 Type VI secretion system, TssF BKD09_RS17235 PF05638 Type VI secretion system effector, Hcp BKD09_RS17240 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath BKD09_RS17245 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 BKD09_RS17255 PF04717 Type VI secretion system, phage-baseplate injector BKD09_RS17255 PF06715 Gp5 C-terminal repeat (3 copies) BKD09_RS17265 PF12773 Double zinc ribbon BKD09_RS17265 PF00498 FHA domain BKD09_RS17270 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE BKD09_RS17275 PF04972 BON domain BKD09_RS17275 PF00691 OmpA family BKD09_RS17280 PF06744 Type VI secretion protein IcmF C-terminal BKD09_RS17280 PF14331 ImcF-related N-terminal domain BKD09_RS17280 PF06761 Intracellular multiplication and human macrophage-killing BKD09_RS17295 PF00069 Protein kinase domain BKD09_RS17295 PF03793 PASTA domain BKD09_RS17355 PF00072 Response regulator receiver domain BKD09_RS17355 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS17360 PF00529 HlyD membrane-fusion protein of T1SS BKD09_RS17365 PF00005 ABC transporter BKD09_RS17365 PF00664 ABC transporter transmembrane region BKD09_RS17385 PF00698 Acyl transferase domain BKD09_RS17390 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase BKD09_RS17395 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG BKD09_RS17405 PF01039 Carboxyl transferase domain BKD09_RS17410 PF06857 Malonate decarboxylase delta subunit (MdcD) BKD09_RS17415 PF16957 Malonate decarboxylase, alpha subunit, transporter BKD09_RS17430 PF07729 FCD domain BKD09_RS17430 PF00392 Bacterial regulatory proteins, gntR family BKD09_RS17440 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BKD09_RS17440 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BKD09_RS17445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKD09_RS17445 PF00005 ABC transporter BKD09_RS17455 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BKD09_RS17460 PF00480 ROK family BKD09_RS17465 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKD09_RS17470 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS17475 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS17475 PF12911 N-terminal TM domain of oligopeptide transport permease C BKD09_RS17480 PF01594 AI-2E family transporter BKD09_RS17485 PF00871 Acetokinase family BKD09_RS17495 PF00027 Cyclic nucleotide-binding domain BKD09_RS17495 PF13545 Crp-like helix-turn-helix domain BKD09_RS17500 PF00072 Response regulator receiver domain BKD09_RS17500 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS17505 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS17505 PF00072 Response regulator receiver domain BKD09_RS17520 PF06826 Predicted Permease Membrane Region BKD09_RS17530 PF01740 STAS domain BKD09_RS17530 PF00916 Sulfate permease family BKD09_RS17535 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BKD09_RS17535 PF01276 Orn/Lys/Arg decarboxylase, major domain BKD09_RS17535 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain BKD09_RS17540 PF02080 TrkA-C domain BKD09_RS17540 PF06826 Predicted Permease Membrane Region BKD09_RS17545 PF06826 Predicted Permease Membrane Region BKD09_RS17545 PF02080 TrkA-C domain BKD09_RS17550 PF00155 Aminotransferase class I and II BKD09_RS17560 PF03976 Polyphosphate kinase 2 (PPK2) BKD09_RS17575 PF13533 Biotin-lipoyl like BKD09_RS17580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS17580 PF13426 PAS domain BKD09_RS17580 PF08447 PAS fold BKD09_RS17580 PF00989 PAS fold BKD09_RS17580 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS17580 PF13493 Domain of unknown function (DUF4118) BKD09_RS17585 PF11737 Protein of unknown function (DUF3300) BKD09_RS17605 PF00384 Molybdopterin oxidoreductase BKD09_RS17605 PF01568 Molydopterin dinucleotide binding domain BKD09_RS17610 PF02805 Metal binding domain of Ada BKD09_RS17610 PF12833 Helix-turn-helix domain BKD09_RS17625 PF00561 alpha/beta hydrolase fold BKD09_RS17630 PF12697 Alpha/beta hydrolase family BKD09_RS17645 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS17660 PF06441 Epoxide hydrolase N terminus BKD09_RS17670 PF02566 OsmC-like protein BKD09_RS17680 PF01625 Peptide methionine sulfoxide reductase BKD09_RS17690 PF00529 HlyD membrane-fusion protein of T1SS BKD09_RS17690 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BKD09_RS17695 PF07690 Major Facilitator Superfamily BKD09_RS17700 PF00248 Aldo/keto reductase family BKD09_RS17705 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS17710 PF03401 Tripartite tricarboxylate transporter family receptor BKD09_RS17715 PF07690 Major Facilitator Superfamily BKD09_RS17840 PF01594 AI-2E family transporter BKD09_RS17845 PF06826 Predicted Permease Membrane Region BKD09_RS17905 PF00072 Response regulator receiver domain BKD09_RS17905 PF13426 PAS domain BKD09_RS17905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS17910 PF06965 Na+/H+ antiporter 1 BKD09_RS17935 PF00005 ABC transporter BKD09_RS17940 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS17950 PF00392 Bacterial regulatory proteins, gntR family BKD09_RS17950 PF07702 UTRA domain BKD09_RS17960 PF07969 Amidohydrolase family BKD09_RS17965 PF00221 Aromatic amino acid lyase BKD09_RS17970 PF17392 Urocanase C-terminal domain BKD09_RS17970 PF01175 Urocanase Rossmann-like domain BKD09_RS17970 PF17391 Urocanase N-terminal domain BKD09_RS17975 PF00440 Bacterial regulatory proteins, tetR family BKD09_RS17980 PF00941 FAD binding domain in molybdopterin dehydrogenase BKD09_RS17980 PF03450 CO dehydrogenase flavoprotein C-terminal domain BKD09_RS17985 PF00111 2Fe-2S iron-sulfur cluster binding domain BKD09_RS17985 PF01799 [2Fe-2S] binding domain BKD09_RS17990 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BKD09_RS17990 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BKD09_RS18000 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS18010 PF00005 ABC transporter BKD09_RS18010 PF12399 Branched-chain amino acid ATP-binding cassette transporter BKD09_RS18015 PF00005 ABC transporter BKD09_RS18125 PF00072 Response regulator receiver domain BKD09_RS18125 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS18130 PF00563 EAL domain BKD09_RS18130 PF00990 Diguanylate cyclase, GGDEF domain BKD09_RS18130 PF03707 Bacterial signalling protein N terminal repeat BKD09_RS18135 PF00753 Metallo-beta-lactamase superfamily BKD09_RS18160 PF12849 PBP superfamily domain BKD09_RS18165 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS18170 PF03960 ArsC family BKD09_RS18175 PF12849 PBP superfamily domain BKD09_RS18180 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BKD09_RS18180 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BKD09_RS18190 PF00355 Rieske [2Fe-2S] domain BKD09_RS18195 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BKD09_RS18195 PF13360 PQQ-like domain BKD09_RS18205 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BKD09_RS18210 PF00111 2Fe-2S iron-sulfur cluster binding domain BKD09_RS18210 PF01799 [2Fe-2S] binding domain BKD09_RS18215 PF04828 Glutathione-dependent formaldehyde-activating enzyme BKD09_RS18220 PF08240 Alcohol dehydrogenase GroES-like domain BKD09_RS18220 PF00107 Zinc-binding dehydrogenase BKD09_RS18230 PF13360 PQQ-like domain BKD09_RS18245 PF03401 Tripartite tricarboxylate transporter family receptor BKD09_RS18265 PF01011 PQQ enzyme repeat BKD09_RS18265 PF13360 PQQ-like domain BKD09_RS18275 PF08042 PqqA family BKD09_RS18300 PF00005 ABC transporter BKD09_RS18335 PF00497 Bacterial extracellular solute-binding proteins, family 3 BKD09_RS18360 PF00005 ABC transporter BKD09_RS18380 PF00756 Putative esterase BKD09_RS18385 PF00072 Response regulator receiver domain BKD09_RS18385 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS18390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS18390 PF07730 Histidine kinase BKD09_RS18390 PF05231 MASE1 BKD09_RS18395 PF07715 TonB-dependent Receptor Plug Domain BKD09_RS18395 PF00593 TonB dependent receptor BKD09_RS18405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS18405 PF03466 LysR substrate binding domain BKD09_RS18430 PF00232 Glycosyl hydrolase family 1 BKD09_RS18435 PF00108 Thiolase, N-terminal domain BKD09_RS18435 PF02803 Thiolase, C-terminal domain BKD09_RS18440 PF00216 Bacterial DNA-binding protein BKD09_RS18445 PF02190 ATP-dependent protease La (LON) substrate-binding domain BKD09_RS18445 PF05362 Lon protease (S16) C-terminal proteolytic domain BKD09_RS18445 PF00004 ATPase family associated with various cellular activities (AAA) BKD09_RS18460 PF01914 MarC family integral membrane protein BKD09_RS18465 PF00596 Class II Aldolase and Adducin N-terminal domain BKD09_RS18495 PF01594 AI-2E family transporter BKD09_RS18525 PF00576 HIUase/Transthyretin family BKD09_RS18530 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BKD09_RS18530 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BKD09_RS18530 PF01799 [2Fe-2S] binding domain BKD09_RS18540 PF01979 Amidohydrolase family BKD09_RS18545 PF02608 ABC transporter substrate-binding protein PnrA-like BKD09_RS18550 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS18555 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS18560 PF00005 ABC transporter BKD09_RS18575 PF00005 ABC transporter BKD09_RS18580 PF00857 Isochorismatase family BKD09_RS18585 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS18590 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS18595 PF02608 ABC transporter substrate-binding protein PnrA-like BKD09_RS18600 PF01546 Peptidase family M20/M25/M40 BKD09_RS18600 PF07687 Peptidase dimerisation domain BKD09_RS18610 PF00375 Sodium:dicarboxylate symporter family BKD09_RS18635 PF10431 C-terminal, D2-small domain, of ClpB protein BKD09_RS18635 PF02861 Clp amino terminal domain, pathogenicity island component BKD09_RS18635 PF17871 AAA lid domain BKD09_RS18635 PF07724 AAA domain (Cdc48 subfamily) BKD09_RS18635 PF00004 ATPase family associated with various cellular activities (AAA) BKD09_RS18645 PF08240 Alcohol dehydrogenase GroES-like domain BKD09_RS18645 PF00107 Zinc-binding dehydrogenase BKD09_RS18695 PF08479 POTRA domain, ShlB-type BKD09_RS18695 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB BKD09_RS18705 PF00990 Diguanylate cyclase, GGDEF domain BKD09_RS18705 PF00563 EAL domain BKD09_RS18705 PF13188 PAS domain BKD09_RS18705 PF03707 Bacterial signalling protein N terminal repeat BKD09_RS18715 PF00491 Arginase family BKD09_RS18725 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BKD09_RS18735 PF01566 Natural resistance-associated macrophage protein BKD09_RS18795 PF01548 Transposase BKD09_RS18795 PF02371 Transposase IS116/IS110/IS902 family BKD09_RS18840 PF01757 Acyltransferase family BKD09_RS18850 PF01494 FAD binding domain BKD09_RS18855 PF00158 Sigma-54 interaction domain BKD09_RS18855 PF00072 Response regulator receiver domain BKD09_RS18855 PF02954 Bacterial regulatory protein, Fis family BKD09_RS18870 PF02515 CoA-transferase family III BKD09_RS18875 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BKD09_RS18880 PF01613 Flavin reductase like domain BKD09_RS18885 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BKD09_RS18885 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BKD09_RS18895 PF00920 Dehydratase family BKD09_RS18900 PF00005 ABC transporter BKD09_RS18905 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS18910 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS18920 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BKD09_RS18920 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BKD09_RS18930 PF00501 AMP-binding enzyme BKD09_RS18930 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS18940 PF00561 alpha/beta hydrolase fold BKD09_RS18950 PF00378 Enoyl-CoA hydratase/isomerase BKD09_RS18955 PF01494 FAD binding domain BKD09_RS18960 PF07883 Cupin domain BKD09_RS18975 PF00501 AMP-binding enzyme BKD09_RS18975 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS18985 PF01743 Poly A polymerase head domain BKD09_RS18985 PF00571 CBS domain BKD09_RS19005 PF00583 Acetyltransferase (GNAT) family BKD09_RS19005 PF13380 CoA binding domain BKD09_RS19005 PF13607 Succinyl-CoA ligase like flavodoxin domain BKD09_RS19020 PF02405 Permease MlaE BKD09_RS19025 PF00005 ABC transporter BKD09_RS19030 PF02470 MlaD protein BKD09_RS19030 PF03886 ABC-type transport auxiliary lipoprotein component BKD09_RS19035 PF00027 Cyclic nucleotide-binding domain BKD09_RS19035 PF13545 Crp-like helix-turn-helix domain BKD09_RS19040 PF13545 Crp-like helix-turn-helix domain BKD09_RS19040 PF00027 Cyclic nucleotide-binding domain BKD09_RS19045 PF04199 Putative cyclase BKD09_RS19050 PF03480 Bacterial extracellular solute-binding protein, family 7 BKD09_RS19060 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BKD09_RS19075 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BKD09_RS19075 PF00034 Cytochrome c BKD09_RS19075 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BKD09_RS19080 PF00111 2Fe-2S iron-sulfur cluster binding domain BKD09_RS19080 PF01799 [2Fe-2S] binding domain BKD09_RS19085 PF03401 Tripartite tricarboxylate transporter family receptor BKD09_RS19090 PF01568 Molydopterin dinucleotide binding domain BKD09_RS19090 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BKD09_RS19090 PF00384 Molybdopterin oxidoreductase BKD09_RS19095 PF00378 Enoyl-CoA hydratase/isomerase BKD09_RS19220 PF02796 Helix-turn-helix domain of resolvase BKD09_RS19220 PF00239 Resolvase, N terminal domain BKD09_RS19250 PF01548 Transposase BKD09_RS19250 PF02371 Transposase IS116/IS110/IS902 family BKD09_RS19260 PF03062 MBOAT, membrane-bound O-acyltransferase family BKD09_RS19340 PF02913 FAD linked oxidases, C-terminal domain BKD09_RS19340 PF01565 FAD binding domain BKD09_RS19340 PF13183 4Fe-4S dicluster domain BKD09_RS19345 PF00392 Bacterial regulatory proteins, gntR family BKD09_RS19345 PF07729 FCD domain BKD09_RS19350 PF00266 Aminotransferase class-V BKD09_RS19360 PF00266 Aminotransferase class-V BKD09_RS19365 PF00378 Enoyl-CoA hydratase/isomerase BKD09_RS19375 PF03401 Tripartite tricarboxylate transporter family receptor BKD09_RS19385 PF01970 Tripartite tricarboxylate transporter TctA family BKD09_RS19410 PF02515 CoA-transferase family III BKD09_RS19445 PF00733 Asparagine synthase BKD09_RS19445 PF13537 Glutamine amidotransferase domain BKD09_RS19455 PF00132 Bacterial transferase hexapeptide (six repeats) BKD09_RS19455 PF14602 Hexapeptide repeat of succinyl-transferase BKD09_RS19455 PF12464 Maltose acetyltransferase BKD09_RS19460 PF08241 Methyltransferase domain BKD09_RS19465 PF01370 NAD dependent epimerase/dehydratase family BKD09_RS19480 PF00483 Nucleotidyl transferase BKD09_RS19485 PF16363 GDP-mannose 4,6 dehydratase BKD09_RS19500 PF01757 Acyltransferase family BKD09_RS19510 PF00535 Glycosyl transferase family 2 BKD09_RS19520 PF01209 ubiE/COQ5 methyltransferase family BKD09_RS19560 PF13537 Glutamine amidotransferase domain BKD09_RS19560 PF00733 Asparagine synthase BKD09_RS19575 PF08241 Methyltransferase domain BKD09_RS19580 PF16889 Heparinase II/III N-terminus BKD09_RS19580 PF07940 Heparinase II/III-like protein BKD09_RS19590 PF02350 UDP-N-acetylglucosamine 2-epimerase BKD09_RS19595 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BKD09_RS19595 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BKD09_RS19595 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BKD09_RS19600 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BKD09_RS19600 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BKD09_RS19605 PF02543 Carbamoyltransferase N-terminus BKD09_RS19605 PF16861 Carbamoyltransferase C-terminus BKD09_RS19630 PF14535 AMP-binding enzyme C-terminal domain BKD09_RS19630 PF00501 AMP-binding enzyme BKD09_RS19640 PF00005 ABC transporter BKD09_RS19655 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS19660 PF00501 AMP-binding enzyme BKD09_RS19665 PF00005 ABC transporter BKD09_RS19665 PF12399 Branched-chain amino acid ATP-binding cassette transporter BKD09_RS19680 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS19680 PF00072 Response regulator receiver domain BKD09_RS19695 PF00551 Formyl transferase BKD09_RS19705 PF13458 Periplasmic binding protein BKD09_RS19720 PF12399 Branched-chain amino acid ATP-binding cassette transporter BKD09_RS19720 PF00005 ABC transporter BKD09_RS19725 PF00005 ABC transporter BKD09_RS19730 PF01717 Cobalamin-independent synthase, Catalytic domain BKD09_RS19745 PF00438 S-adenosylmethionine synthetase, N-terminal domain BKD09_RS19745 PF02772 S-adenosylmethionine synthetase, central domain BKD09_RS19745 PF02773 S-adenosylmethionine synthetase, C-terminal domain BKD09_RS19750 PF05221 S-adenosyl-L-homocysteine hydrolase BKD09_RS19750 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BKD09_RS19760 PF00743 Flavin-binding monooxygenase-like BKD09_RS19770 PF01361 Tautomerase enzyme BKD09_RS19780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS19780 PF03466 LysR substrate binding domain BKD09_RS19800 PF00696 Amino acid kinase family BKD09_RS19805 PF00696 Amino acid kinase family BKD09_RS19815 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BKD09_RS19820 PF01557 Fumarylacetoacetate (FAA) hydrolase family BKD09_RS19825 PF00005 ABC transporter BKD09_RS19825 PF00664 ABC transporter transmembrane region BKD09_RS19830 PF01370 NAD dependent epimerase/dehydratase family BKD09_RS19835 PF00534 Glycosyl transferases group 1 BKD09_RS19850 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BKD09_RS19855 PF01370 NAD dependent epimerase/dehydratase family BKD09_RS19860 PF00294 pfkB family carbohydrate kinase BKD09_RS19860 PF01467 Cytidylyltransferase-like BKD09_RS19870 PF02719 Polysaccharide biosynthesis protein BKD09_RS19875 PF13579 Glycosyl transferase 4-like domain BKD09_RS19880 PF01370 NAD dependent epimerase/dehydratase family BKD09_RS19885 PF00953 Glycosyl transferase family 4 BKD09_RS19895 PF01370 NAD dependent epimerase/dehydratase family BKD09_RS19900 PF00483 Nucleotidyl transferase BKD09_RS19900 PF01050 Mannose-6-phosphate isomerase BKD09_RS19905 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BKD09_RS19905 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BKD09_RS19910 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BKD09_RS19915 PF03023 Lipid II flippase MurJ BKD09_RS19920 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS19925 PF07859 alpha/beta hydrolase fold BKD09_RS19930 PF08240 Alcohol dehydrogenase GroES-like domain BKD09_RS19930 PF00107 Zinc-binding dehydrogenase BKD09_RS19940 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BKD09_RS19940 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BKD09_RS19945 PF01322 Cytochrome C' BKD09_RS19955 PF01053 Cys/Met metabolism PLP-dependent enzyme BKD09_RS19965 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS19975 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BKD09_RS19975 PF00034 Cytochrome c BKD09_RS19975 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BKD09_RS19980 PF02371 Transposase IS116/IS110/IS902 family BKD09_RS19980 PF01548 Transposase BKD09_RS19995 PF04228 Putative neutral zinc metallopeptidase BKD09_RS20000 PF03050 Transposase IS66 family BKD09_RS20000 PF13007 Transposase C of IS166 homeodomain BKD09_RS20000 PF13817 IS66 C-terminal element BKD09_RS20000 PF13005 zinc-finger binding domain of transposase IS66 BKD09_RS20010 PF08543 Phosphomethylpyrimidine kinase BKD09_RS20020 PF00534 Glycosyl transferases group 1 BKD09_RS20020 PF13439 Glycosyltransferase Family 4 BKD09_RS20025 PF00291 Pyridoxal-phosphate dependent enzyme BKD09_RS20035 PF02690 Na+/Pi-cotransporter BKD09_RS20055 PF12832 MFS_1 like family BKD09_RS20060 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BKD09_RS20060 PF13378 Enolase C-terminal domain-like BKD09_RS20065 PF02405 Permease MlaE BKD09_RS20070 PF00005 ABC transporter BKD09_RS20075 PF02470 MlaD protein BKD09_RS20075 PF03886 ABC-type transport auxiliary lipoprotein component BKD09_RS20095 PF00111 2Fe-2S iron-sulfur cluster binding domain BKD09_RS20105 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKD09_RS20125 PF07715 TonB-dependent Receptor Plug Domain BKD09_RS20125 PF00593 TonB dependent receptor BKD09_RS20130 PF01638 HxlR-like helix-turn-helix BKD09_RS20145 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS20145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS20145 PF00672 HAMP domain BKD09_RS20150 PF00486 Transcriptional regulatory protein, C terminal BKD09_RS20150 PF00072 Response regulator receiver domain BKD09_RS20165 PF08666 SAF domain BKD09_RS20165 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus BKD09_RS20170 PF00171 Aldehyde dehydrogenase family BKD09_RS20175 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BKD09_RS20175 PF13378 Enolase C-terminal domain-like BKD09_RS20180 PF00701 Dihydrodipicolinate synthetase family BKD09_RS20185 PF03466 LysR substrate binding domain BKD09_RS20185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS20190 PF07690 Major Facilitator Superfamily BKD09_RS20205 PF05974 Domain of unknown function (DUF892) BKD09_RS20210 PF07690 Major Facilitator Superfamily BKD09_RS20215 PF03707 Bacterial signalling protein N terminal repeat BKD09_RS20215 PF13188 PAS domain BKD09_RS20215 PF00563 EAL domain BKD09_RS20215 PF00990 Diguanylate cyclase, GGDEF domain BKD09_RS20235 PF00392 Bacterial regulatory proteins, gntR family BKD09_RS20235 PF00155 Aminotransferase class I and II BKD09_RS20245 PF00582 Universal stress protein family BKD09_RS20255 PF01266 FAD dependent oxidoreductase BKD09_RS20260 PF01641 SelR domain BKD09_RS20265 PF00460 Flagella basal body rod protein BKD09_RS20265 PF07196 Flagellin hook IN motif BKD09_RS20265 PF07559 Flagellar basal body protein FlaE BKD09_RS20265 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BKD09_RS20270 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BKD09_RS20270 PF00460 Flagella basal body rod protein BKD09_RS20295 PF00282 Pyridoxal-dependent decarboxylase conserved domain BKD09_RS20300 PF07378 Flagellar protein FlbT BKD09_RS20305 PF00669 Bacterial flagellin N-terminal helical region BKD09_RS20305 PF00700 Bacterial flagellin C-terminal helical region BKD09_RS20310 PF00669 Bacterial flagellin N-terminal helical region BKD09_RS20310 PF00700 Bacterial flagellin C-terminal helical region BKD09_RS20335 PF02119 Flagellar P-ring protein BKD09_RS20340 PF10768 Class II flagellar assembly regulator BKD09_RS20345 PF01638 HxlR-like helix-turn-helix BKD09_RS20350 PF13460 NAD(P)H-binding BKD09_RS20355 PF01258 Prokaryotic dksA/traR C4-type zinc finger BKD09_RS20360 PF01638 HxlR-like helix-turn-helix BKD09_RS20365 PF16363 GDP-mannose 4,6 dehydratase BKD09_RS20375 PF02107 Flagellar L-ring protein BKD09_RS20385 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BKD09_RS20385 PF00460 Flagella basal body rod protein BKD09_RS20390 PF00460 Flagella basal body rod protein BKD09_RS20390 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BKD09_RS20395 PF03748 Flagellar basal body-associated protein FliL BKD09_RS20400 PF02154 Flagellar motor switch protein FliM BKD09_RS20400 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BKD09_RS20450 PF00813 FliP family BKD09_RS20465 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BKD09_RS20470 PF02049 Flagellar hook-basal body complex protein FliE BKD09_RS20475 PF01313 Bacterial export proteins, family 3 BKD09_RS20480 PF01311 Bacterial export proteins, family 1 BKD09_RS20485 PF01312 FlhB HrpN YscU SpaS Family BKD09_RS20490 PF13188 PAS domain BKD09_RS20490 PF08448 PAS fold BKD09_RS20490 PF00072 Response regulator receiver domain BKD09_RS20490 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS20490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS20500 PF01425 Amidase BKD09_RS20510 PF00005 ABC transporter BKD09_RS20515 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS20520 PF09084 NMT1/THI5 like BKD09_RS20555 PF05683 Fumarase C-terminus BKD09_RS20555 PF05681 Fumarate hydratase (Fumerase) BKD09_RS20575 PF04279 Intracellular septation protein A BKD09_RS20590 PF03055 Retinal pigment epithelial membrane protein BKD09_RS20620 PF01212 Beta-eliminating lyase BKD09_RS20625 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS20630 PF00005 ABC transporter BKD09_RS20630 PF08402 TOBE domain BKD09_RS20640 PF00266 Aminotransferase class-V BKD09_RS20645 PF00694 Aconitase C-terminal domain BKD09_RS20650 PF00330 Aconitase family (aconitate hydratase) BKD09_RS20655 PF03737 Aldolase/RraA BKD09_RS20675 PF01425 Amidase BKD09_RS20690 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS20700 PF12399 Branched-chain amino acid ATP-binding cassette transporter BKD09_RS20700 PF00005 ABC transporter BKD09_RS20705 PF00005 ABC transporter BKD09_RS20715 PF01425 Amidase BKD09_RS20720 PF00005 ABC transporter BKD09_RS20725 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS20735 PF00455 DeoR C terminal sensor domain BKD09_RS20735 PF08220 DeoR-like helix-turn-helix domain BKD09_RS20740 PF01791 DeoC/LacD family aldolase BKD09_RS20745 PF00171 Aldehyde dehydrogenase family BKD09_RS20750 PF05025 RbsD / FucU transport protein family BKD09_RS20755 PF00294 pfkB family carbohydrate kinase BKD09_RS20760 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS20765 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS20775 PF00005 ABC transporter BKD09_RS20775 PF17912 MalK OB fold domain BKD09_RS20820 PF01011 PQQ enzyme repeat BKD09_RS20895 PF00535 Glycosyl transferase family 2 BKD09_RS20915 PF00154 recA bacterial DNA recombination protein BKD09_RS20925 PF02347 Glycine cleavage system P-protein BKD09_RS20930 PF01597 Glycine cleavage H-protein BKD09_RS20935 PF01571 Aminomethyltransferase folate-binding domain BKD09_RS20935 PF08669 Glycine cleavage T-protein C-terminal barrel domain BKD09_RS20940 PF02272 DHHA1 domain BKD09_RS20940 PF01411 tRNA synthetases class II (A) BKD09_RS20940 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BKD09_RS20945 PF00520 Ion transport protein BKD09_RS20945 PF00027 Cyclic nucleotide-binding domain BKD09_RS20955 PF00180 Isocitrate/isopropylmalate dehydrogenase BKD09_RS20960 PF00588 SpoU rRNA Methylase family BKD09_RS20970 PF00990 Diguanylate cyclase, GGDEF domain BKD09_RS20970 PF00563 EAL domain BKD09_RS20970 PF03707 Bacterial signalling protein N terminal repeat BKD09_RS20980 PF00107 Zinc-binding dehydrogenase BKD09_RS20980 PF08240 Alcohol dehydrogenase GroES-like domain BKD09_RS20985 PF07298 NnrU protein BKD09_RS20990 PF00561 alpha/beta hydrolase fold BKD09_RS20995 PF02560 Cyanate lyase C-terminal domain BKD09_RS21005 PF01259 SAICAR synthetase BKD09_RS21010 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase BKD09_RS21015 PF01544 CorA-like Mg2+ transporter protein BKD09_RS21025 PF03401 Tripartite tricarboxylate transporter family receptor BKD09_RS21045 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BKD09_RS21045 PF02769 AIR synthase related protein, C-terminal domain BKD09_RS21045 PF00586 AIR synthase related protein, N-terminal domain BKD09_RS21060 PF12146 Serine aminopeptidase, S33 BKD09_RS21075 PF06772 Bacterial low temperature requirement A protein (LtrA) BKD09_RS21080 PF10017 Histidine-specific methyltransferase, SAM-dependent BKD09_RS21085 PF12867 DinB superfamily BKD09_RS21085 PF03781 Sulfatase-modifying factor enzyme 1 BKD09_RS21090 PF00462 Glutaredoxin BKD09_RS21095 PF01661 Macro domain BKD09_RS21100 PF00144 Beta-lactamase BKD09_RS21105 PF00144 Beta-lactamase BKD09_RS21110 PF01212 Beta-eliminating lyase BKD09_RS21115 PF00163 Ribosomal protein S4/S9 N-terminal domain BKD09_RS21115 PF01479 S4 domain BKD09_RS21135 PF01177 Asp/Glu/Hydantoin racemase BKD09_RS21155 PF02355 Protein export membrane protein BKD09_RS21160 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS21160 PF00501 AMP-binding enzyme BKD09_RS21180 PF00072 Response regulator receiver domain BKD09_RS21180 PF13426 PAS domain BKD09_RS21180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS21180 PF08448 PAS fold BKD09_RS21180 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS21185 PF01546 Peptidase family M20/M25/M40 BKD09_RS21185 PF07687 Peptidase dimerisation domain BKD09_RS21190 PF00206 Lyase BKD09_RS21190 PF10397 Adenylosuccinate lyase C-terminus BKD09_RS21195 PF00440 Bacterial regulatory proteins, tetR family BKD09_RS21205 PF12706 Beta-lactamase superfamily domain BKD09_RS21215 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS21215 PF00072 Response regulator receiver domain BKD09_RS21220 PF07730 Histidine kinase BKD09_RS21220 PF05231 MASE1 BKD09_RS21220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS21245 PF03793 PASTA domain BKD09_RS21245 PF00069 Protein kinase domain BKD09_RS21265 PF00834 Ribulose-phosphate 3 epimerase family BKD09_RS21275 PF03576 Peptidase family S58 BKD09_RS21280 PF00072 Response regulator receiver domain BKD09_RS21280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS21280 PF13426 PAS domain BKD09_RS21285 PF00072 Response regulator receiver domain BKD09_RS21285 PF02954 Bacterial regulatory protein, Fis family BKD09_RS21285 PF00158 Sigma-54 interaction domain BKD09_RS21290 PF13458 Periplasmic binding protein BKD09_RS21295 PF00005 ABC transporter BKD09_RS21300 PF12399 Branched-chain amino acid ATP-binding cassette transporter BKD09_RS21300 PF00005 ABC transporter BKD09_RS21305 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS21305 PF11862 Domain of unknown function (DUF3382) BKD09_RS21310 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS21325 PF02627 Carboxymuconolactone decarboxylase family BKD09_RS21330 PF12146 Serine aminopeptidase, S33 BKD09_RS21335 PF10397 Adenylosuccinate lyase C-terminus BKD09_RS21335 PF00206 Lyase BKD09_RS21345 PF01799 [2Fe-2S] binding domain BKD09_RS21345 PF00111 2Fe-2S iron-sulfur cluster binding domain BKD09_RS21350 PF03450 CO dehydrogenase flavoprotein C-terminal domain BKD09_RS21350 PF00941 FAD binding domain in molybdopterin dehydrogenase BKD09_RS21370 PF13478 XdhC Rossmann domain BKD09_RS21370 PF02625 XdhC and CoxI family BKD09_RS21375 PF00132 Bacterial transferase hexapeptide (six repeats) BKD09_RS21375 PF12804 MobA-like NTP transferase domain BKD09_RS21395 PF01022 Bacterial regulatory protein, arsR family BKD09_RS21400 PF08361 MAATS-type transcriptional repressor, C-terminal region BKD09_RS21400 PF00440 Bacterial regulatory proteins, tetR family BKD09_RS21410 PF00005 ABC transporter BKD09_RS21420 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS21420 PF00072 Response regulator receiver domain BKD09_RS21430 PF00392 Bacterial regulatory proteins, gntR family BKD09_RS21430 PF07702 UTRA domain BKD09_RS21435 PF07690 Major Facilitator Superfamily BKD09_RS21440 PF04909 Amidohydrolase BKD09_RS21445 PF02567 Phenazine biosynthesis-like protein BKD09_RS21470 PF00795 Carbon-nitrogen hydrolase BKD09_RS21470 PF00535 Glycosyl transferase family 2 BKD09_RS21480 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS21505 PF13458 Periplasmic binding protein BKD09_RS21510 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS21520 PF00005 ABC transporter BKD09_RS21520 PF12399 Branched-chain amino acid ATP-binding cassette transporter BKD09_RS21525 PF00005 ABC transporter BKD09_RS21530 PF09383 NIL domain BKD09_RS21530 PF00005 ABC transporter BKD09_RS21535 PF00171 Aldehyde dehydrogenase family BKD09_RS21545 PF00043 Glutathione S-transferase, C-terminal domain BKD09_RS21545 PF02798 Glutathione S-transferase, N-terminal domain BKD09_RS21550 PF00857 Isochorismatase family BKD09_RS21555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS21555 PF03466 LysR substrate binding domain BKD09_RS21575 PF01145 SPFH domain / Band 7 family BKD09_RS21580 PF10502 Signal peptidase, peptidase S26 BKD09_RS21585 PF00118 TCP-1/cpn60 chaperonin family BKD09_RS21590 PF00166 Chaperonin 10 Kd subunit BKD09_RS21595 PF06233 Usg-like family BKD09_RS21605 PF07670 Nucleoside recognition BKD09_RS21605 PF07662 Na+ dependent nucleoside transporter C-terminus BKD09_RS21605 PF01773 Na+ dependent nucleoside transporter N-terminus BKD09_RS21620 PF00106 short chain dehydrogenase BKD09_RS21640 PF08379 Bacterial transglutaminase-like N-terminal region BKD09_RS21640 PF01841 Transglutaminase-like superfamily BKD09_RS21645 PF14403 Circularly permuted ATP-grasp type 2 BKD09_RS21645 PF04168 A predicted alpha-helical domain with a conserved ER motif. BKD09_RS21650 PF14403 Circularly permuted ATP-grasp type 2 BKD09_RS21655 PF18146 Damage-inducible protein CinA KH domain BKD09_RS21655 PF02464 Competence-damaged protein BKD09_RS21655 PF00994 Probable molybdopterin binding domain BKD09_RS21660 PF00156 Phosphoribosyl transferase domain BKD09_RS21675 PF08267 Cobalamin-independent synthase, N-terminal domain BKD09_RS21675 PF01717 Cobalamin-independent synthase, Catalytic domain BKD09_RS21680 PF02798 Glutathione S-transferase, N-terminal domain BKD09_RS21680 PF00043 Glutathione S-transferase, C-terminal domain BKD09_RS21690 PF00109 Beta-ketoacyl synthase, N-terminal domain BKD09_RS21690 PF16197 Ketoacyl-synthetase C-terminal extension BKD09_RS21690 PF08240 Alcohol dehydrogenase GroES-like domain BKD09_RS21690 PF14765 Polyketide synthase dehydratase BKD09_RS21690 PF00550 Phosphopantetheine attachment site BKD09_RS21690 PF08659 KR domain BKD09_RS21690 PF02801 Beta-ketoacyl synthase, C-terminal domain BKD09_RS21690 PF00698 Acyl transferase domain BKD09_RS21695 PF00378 Enoyl-CoA hydratase/isomerase BKD09_RS21700 PF01425 Amidase BKD09_RS21705 PF07687 Peptidase dimerisation domain BKD09_RS21705 PF01546 Peptidase family M20/M25/M40 BKD09_RS21715 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKD09_RS21715 PF00005 ABC transporter BKD09_RS21720 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS21725 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS21730 PF01266 FAD dependent oxidoreductase BKD09_RS21735 PF01546 Peptidase family M20/M25/M40 BKD09_RS21735 PF07687 Peptidase dimerisation domain BKD09_RS21740 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKD09_RS21750 PF07690 Major Facilitator Superfamily BKD09_RS21760 PF00378 Enoyl-CoA hydratase/isomerase BKD09_RS21780 PF01494 FAD binding domain BKD09_RS21795 PF12146 Serine aminopeptidase, S33 BKD09_RS21805 PF06426 Serine acetyltransferase, N-terminal BKD09_RS21805 PF00132 Bacterial transferase hexapeptide (six repeats) BKD09_RS21830 PF00132 Bacterial transferase hexapeptide (six repeats) BKD09_RS21845 PF01177 Asp/Glu/Hydantoin racemase BKD09_RS21850 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS21855 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS21865 PF00005 ABC transporter BKD09_RS21865 PF08402 TOBE domain BKD09_RS21910 PF00561 alpha/beta hydrolase fold BKD09_RS21920 PF07724 AAA domain (Cdc48 subfamily) BKD09_RS21920 PF00004 ATPase family associated with various cellular activities (AAA) BKD09_RS21920 PF17871 AAA lid domain BKD09_RS21920 PF02861 Clp amino terminal domain, pathogenicity island component BKD09_RS21920 PF10431 C-terminal, D2-small domain, of ClpB protein BKD09_RS21925 PF00107 Zinc-binding dehydrogenase BKD09_RS21925 PF08240 Alcohol dehydrogenase GroES-like domain BKD09_RS21960 PF00271 Helicase conserved C-terminal domain BKD09_RS21960 PF00270 DEAD/DEAH box helicase BKD09_RS21960 PF03880 DbpA RNA binding domain BKD09_RS22005 PF00571 CBS domain BKD09_RS22010 PF01734 Patatin-like phospholipase BKD09_RS22020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS22020 PF03466 LysR substrate binding domain BKD09_RS22025 PF00248 Aldo/keto reductase family BKD09_RS22035 PF08240 Alcohol dehydrogenase GroES-like domain BKD09_RS22035 PF08990 Erythronolide synthase docking BKD09_RS22035 PF14765 Polyketide synthase dehydratase BKD09_RS22035 PF16197 Ketoacyl-synthetase C-terminal extension BKD09_RS22035 PF00109 Beta-ketoacyl synthase, N-terminal domain BKD09_RS22035 PF00550 Phosphopantetheine attachment site BKD09_RS22035 PF00698 Acyl transferase domain BKD09_RS22035 PF02801 Beta-ketoacyl synthase, C-terminal domain BKD09_RS22035 PF08659 KR domain BKD09_RS22035 PF09277 Erythronolide synthase, docking BKD09_RS22040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS22040 PF03466 LysR substrate binding domain BKD09_RS22050 PF07298 NnrU protein BKD09_RS22065 PF00563 EAL domain BKD09_RS22065 PF08448 PAS fold BKD09_RS22065 PF00990 Diguanylate cyclase, GGDEF domain BKD09_RS22065 PF08447 PAS fold BKD09_RS22070 PF00144 Beta-lactamase BKD09_RS22080 PF03129 Anticodon binding domain BKD09_RS22080 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BKD09_RS22080 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BKD09_RS22080 PF02824 TGS domain BKD09_RS22085 PF07690 Major Facilitator Superfamily BKD09_RS22105 PF13520 Amino acid permease BKD09_RS22120 PF01809 Putative membrane protein insertion efficiency factor BKD09_RS22135 PF01227 GTP cyclohydrolase I BKD09_RS22140 PF01502 Phosphoribosyl-AMP cyclohydrolase BKD09_RS22160 PF00072 Response regulator receiver domain BKD09_RS22170 PF13443 Cro/C1-type HTH DNA-binding domain BKD09_RS22180 PF01513 ATP-NAD kinase BKD09_RS22240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BKD09_RS22240 PF00672 HAMP domain BKD09_RS22255 PF01011 PQQ enzyme repeat BKD09_RS22255 PF13360 PQQ-like domain BKD09_RS22270 PF03741 Integral membrane protein TerC family BKD09_RS22305 PF00588 SpoU rRNA Methylase family BKD09_RS22305 PF08032 RNA 2'-O ribose methyltransferase substrate binding BKD09_RS22320 PF03466 LysR substrate binding domain BKD09_RS22320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS22325 PF07690 Major Facilitator Superfamily BKD09_RS22335 PF01979 Amidohydrolase family BKD09_RS22345 PF13361 UvrD-like helicase C-terminal domain BKD09_RS22345 PF00580 UvrD/REP helicase N-terminal domain BKD09_RS22355 PF03795 YCII-related domain BKD09_RS22375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS22375 PF13426 PAS domain BKD09_RS22375 PF00072 Response regulator receiver domain BKD09_RS22400 PF00873 AcrB/AcrD/AcrF family BKD09_RS22410 PF00873 AcrB/AcrD/AcrF family BKD09_RS22440 PF12704 MacB-like periplasmic core domain BKD09_RS22440 PF02687 FtsX-like permease family BKD09_RS22440 PF00005 ABC transporter BKD09_RS22455 PF04955 HupE / UreJ protein BKD09_RS22505 PF04542 Sigma-70 region 2 BKD09_RS22505 PF08281 Sigma-70, region 4 BKD09_RS22510 PF12450 von Willebrand factor BKD09_RS22510 PF00092 von Willebrand factor type A domain BKD09_RS22510 PF12034 Domain of unknown function (DUF3520) BKD09_RS22520 PF04542 Sigma-70 region 2 BKD09_RS22520 PF04545 Sigma-70, region 4 BKD09_RS22530 PF01292 Prokaryotic cytochrome b561 BKD09_RS22555 PF01370 NAD dependent epimerase/dehydratase family BKD09_RS22565 PF00083 Sugar (and other) transporter BKD09_RS22570 PF05853 beta-keto acid cleavage enzyme BKD09_RS22580 PF13505 Outer membrane protein beta-barrel domain BKD09_RS22585 PF02515 CoA-transferase family III BKD09_RS22605 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BKD09_RS22605 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BKD09_RS22605 PF02770 Acyl-CoA dehydrogenase, middle domain BKD09_RS22615 PF01810 LysE type translocator BKD09_RS22625 PF01546 Peptidase family M20/M25/M40 BKD09_RS22625 PF07687 Peptidase dimerisation domain BKD09_RS22630 PF17934 Tetracyclin repressor-like, C-terminal domain BKD09_RS22630 PF00440 Bacterial regulatory proteins, tetR family BKD09_RS22650 PF00300 Histidine phosphatase superfamily (branch 1) BKD09_RS22655 PF00106 short chain dehydrogenase BKD09_RS22660 PF00144 Beta-lactamase BKD09_RS22670 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BKD09_RS22675 PF02357 Transcription termination factor nusG BKD09_RS22675 PF00467 KOW motif BKD09_RS22680 PF03946 Ribosomal protein L11, N-terminal domain BKD09_RS22680 PF00298 Ribosomal protein L11, RNA binding domain BKD09_RS22685 PF00687 Ribosomal protein L1p/L10e family BKD09_RS22690 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BKD09_RS22690 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BKD09_RS22695 PF00466 Ribosomal protein L10 BKD09_RS22700 PF16320 Ribosomal protein L7/L12 dimerisation domain BKD09_RS22700 PF00542 Ribosomal protein L7/L12 C-terminal domain BKD09_RS22705 PF04560 RNA polymerase Rpb2, domain 7 BKD09_RS22705 PF04561 RNA polymerase Rpb2, domain 2 BKD09_RS22705 PF00562 RNA polymerase Rpb2, domain 6 BKD09_RS22705 PF04565 RNA polymerase Rpb2, domain 3 BKD09_RS22705 PF04563 RNA polymerase beta subunit BKD09_RS22705 PF10385 RNA polymerase beta subunit external 1 domain BKD09_RS22710 PF04998 RNA polymerase Rpb1, domain 5 BKD09_RS22710 PF05000 RNA polymerase Rpb1, domain 4 BKD09_RS22710 PF04983 RNA polymerase Rpb1, domain 3 BKD09_RS22710 PF00623 RNA polymerase Rpb1, domain 2 BKD09_RS22710 PF04997 RNA polymerase Rpb1, domain 1 BKD09_RS22715 PF02027 RolB/RolC glucosidase family BKD09_RS22715 PF01593 Flavin containing amine oxidoreductase BKD09_RS22720 PF00664 ABC transporter transmembrane region BKD09_RS22720 PF00005 ABC transporter BKD09_RS22725 PF01494 FAD binding domain BKD09_RS22730 PF00164 Ribosomal protein S12/S23 BKD09_RS22735 PF00177 Ribosomal protein S7p/S5e BKD09_RS22740 PF14492 Elongation Factor G, domain II BKD09_RS22740 PF03764 Elongation factor G, domain IV BKD09_RS22740 PF00679 Elongation factor G C-terminus BKD09_RS22740 PF03144 Elongation factor Tu domain 2 BKD09_RS22740 PF00009 Elongation factor Tu GTP binding domain BKD09_RS22745 PF03143 Elongation factor Tu C-terminal domain BKD09_RS22745 PF03144 Elongation factor Tu domain 2 BKD09_RS22745 PF00009 Elongation factor Tu GTP binding domain BKD09_RS22750 PF00338 Ribosomal protein S10p/S20e BKD09_RS22755 PF00297 Ribosomal protein L3 BKD09_RS22760 PF00573 Ribosomal protein L4/L1 family BKD09_RS22765 PF00276 Ribosomal protein L23 BKD09_RS22770 PF03947 Ribosomal Proteins L2, C-terminal domain BKD09_RS22770 PF00181 Ribosomal Proteins L2, RNA binding domain BKD09_RS22775 PF00203 Ribosomal protein S19 BKD09_RS22780 PF00237 Ribosomal protein L22p/L17e BKD09_RS22785 PF00189 Ribosomal protein S3, C-terminal domain BKD09_RS22785 PF07650 KH domain BKD09_RS22790 PF00252 Ribosomal protein L16p/L10e BKD09_RS22795 PF00831 Ribosomal L29 protein BKD09_RS22800 PF00366 Ribosomal protein S17 BKD09_RS22805 PF00238 Ribosomal protein L14p/L23e BKD09_RS22810 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BKD09_RS22815 PF00281 Ribosomal protein L5 BKD09_RS22815 PF00673 ribosomal L5P family C-terminus BKD09_RS22820 PF00253 Ribosomal protein S14p/S29e BKD09_RS22825 PF00410 Ribosomal protein S8 BKD09_RS22830 PF00347 Ribosomal protein L6 BKD09_RS22835 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BKD09_RS22840 PF03719 Ribosomal protein S5, C-terminal domain BKD09_RS22840 PF00333 Ribosomal protein S5, N-terminal domain BKD09_RS22845 PF00327 Ribosomal protein L30p/L7e BKD09_RS22850 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BKD09_RS22855 PF00344 SecY translocase BKD09_RS22865 PF00416 Ribosomal protein S13/S18 BKD09_RS22870 PF00411 Ribosomal protein S11 BKD09_RS22875 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BKD09_RS22875 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BKD09_RS22875 PF01000 RNA polymerase Rpb3/RpoA insert domain BKD09_RS22880 PF01196 Ribosomal protein L17 BKD09_RS22890 PF00106 short chain dehydrogenase BKD09_RS22895 PF00107 Zinc-binding dehydrogenase BKD09_RS22895 PF08240 Alcohol dehydrogenase GroES-like domain BKD09_RS22900 PF01638 HxlR-like helix-turn-helix BKD09_RS22910 PF13180 PDZ domain BKD09_RS22915 PF12002 MgsA AAA+ ATPase C terminal BKD09_RS22915 PF16193 AAA C-terminal domain BKD09_RS22915 PF00004 ATPase family associated with various cellular activities (AAA) BKD09_RS22920 PF00849 RNA pseudouridylate synthase BKD09_RS22920 PF01479 S4 domain BKD09_RS22940 PF01312 FlhB HrpN YscU SpaS Family BKD09_RS22945 PF00905 Penicillin binding protein transpeptidase domain BKD09_RS22970 PF01039 Carboxyl transferase domain BKD09_RS22985 PF00400 WD domain, G-beta repeat BKD09_RS22985 PF00931 NB-ARC domain BKD09_RS23010 PF00561 alpha/beta hydrolase fold BKD09_RS23045 PF03458 UPF0126 domain BKD09_RS23050 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BKD09_RS23050 PF00034 Cytochrome c BKD09_RS23075 PF01575 MaoC like domain BKD09_RS23080 PF00106 short chain dehydrogenase BKD09_RS23100 PF08447 PAS fold BKD09_RS23100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS23100 PF08448 PAS fold BKD09_RS23140 PF12833 Helix-turn-helix domain BKD09_RS23140 PF14525 AraC-binding-like domain BKD09_RS23190 PF03441 FAD binding domain of DNA photolyase BKD09_RS23190 PF00875 DNA photolyase BKD09_RS23195 PF08269 Cache domain BKD09_RS23195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BKD09_RS23200 PF10417 C-terminal domain of 1-Cys peroxiredoxin BKD09_RS23200 PF00578 AhpC/TSA family BKD09_RS23215 PF03466 LysR substrate binding domain BKD09_RS23215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS23220 PF00106 short chain dehydrogenase BKD09_RS23260 PF00144 Beta-lactamase BKD09_RS23280 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS23280 PF00072 Response regulator receiver domain BKD09_RS23285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS23285 PF05231 MASE1 BKD09_RS23285 PF07730 Histidine kinase BKD09_RS23295 PF08240 Alcohol dehydrogenase GroES-like domain BKD09_RS23295 PF00107 Zinc-binding dehydrogenase BKD09_RS23305 PF13378 Enolase C-terminal domain-like BKD09_RS23305 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BKD09_RS23315 PF00083 Sugar (and other) transporter BKD09_RS23325 PF03600 Citrate transporter BKD09_RS23330 PF07690 Major Facilitator Superfamily BKD09_RS23335 PF00892 EamA-like transporter family BKD09_RS23340 PF13426 PAS domain BKD09_RS23340 PF00072 Response regulator receiver domain BKD09_RS23340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS23345 PF10005 zinc-ribbon domain BKD09_RS23345 PF15887 Putative zinc-binding metallo-peptidase BKD09_RS23350 PF18140 Propionyl-coenzyme A carboxylase BT domain BKD09_RS23350 PF02785 Biotin carboxylase C-terminal domain BKD09_RS23350 PF00289 Biotin carboxylase, N-terminal domain BKD09_RS23350 PF00364 Biotin-requiring enzyme BKD09_RS23350 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BKD09_RS23360 PF00708 Acylphosphatase BKD09_RS23365 PF00072 Response regulator receiver domain BKD09_RS23365 PF13426 PAS domain BKD09_RS23365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS23380 PF08338 Domain of unknown function (DUF1731) BKD09_RS23380 PF01370 NAD dependent epimerase/dehydratase family BKD09_RS23390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS23390 PF03466 LysR substrate binding domain BKD09_RS23400 PF03796 DnaB-like helicase C terminal domain BKD09_RS23405 PF03099 Biotin/lipoate A/B protein ligase family BKD09_RS23440 PF02492 CobW/HypB/UreG, nucleotide-binding domain BKD09_RS23440 PF07683 Cobalamin synthesis protein cobW C-terminal domain BKD09_RS23455 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain BKD09_RS23455 PF01522 Polysaccharide deacetylase BKD09_RS23460 PF01522 Polysaccharide deacetylase BKD09_RS23465 PF00571 CBS domain BKD09_RS23465 PF01769 Divalent cation transporter BKD09_RS23465 PF03448 MgtE intracellular N domain BKD09_RS23475 PF00248 Aldo/keto reductase family BKD09_RS23500 PF00043 Glutathione S-transferase, C-terminal domain BKD09_RS23500 PF13417 Glutathione S-transferase, N-terminal domain BKD09_RS23530 PF02569 Pantoate-beta-alanine ligase BKD09_RS23535 PF13614 AAA domain BKD09_RS23540 PF12697 Alpha/beta hydrolase family BKD09_RS23555 PF07943 Penicillin-binding protein 5, C-terminal domain BKD09_RS23555 PF00768 D-alanyl-D-alanine carboxypeptidase BKD09_RS23570 PF02617 ATP-dependent Clp protease adaptor protein ClpS BKD09_RS23575 PF10431 C-terminal, D2-small domain, of ClpB protein BKD09_RS23575 PF00004 ATPase family associated with various cellular activities (AAA) BKD09_RS23575 PF07724 AAA domain (Cdc48 subfamily) BKD09_RS23575 PF17871 AAA lid domain BKD09_RS23575 PF02861 Clp amino terminal domain, pathogenicity island component BKD09_RS23580 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BKD09_RS23590 PF07690 Major Facilitator Superfamily BKD09_RS23595 PF00248 Aldo/keto reductase family BKD09_RS23605 PF14525 AraC-binding-like domain BKD09_RS23610 PF00795 Carbon-nitrogen hydrolase BKD09_RS23615 PF13816 Haem-containing dehydratase BKD09_RS23620 PF13419 Haloacid dehalogenase-like hydrolase BKD09_RS23675 PF01980 tRNA-methyltransferase O BKD09_RS23680 PF01230 HIT domain BKD09_RS23720 PF11799 impB/mucB/samB family C-terminal domain BKD09_RS23720 PF00817 impB/mucB/samB family BKD09_RS23730 PF00072 Response regulator receiver domain BKD09_RS23735 PF00072 Response regulator receiver domain BKD09_RS23735 PF00990 Diguanylate cyclase, GGDEF domain BKD09_RS23760 PF03734 L,D-transpeptidase catalytic domain BKD09_RS23785 PF00471 Ribosomal protein L33 BKD09_RS23790 PF00296 Luciferase-like monooxygenase BKD09_RS23795 PF07687 Peptidase dimerisation domain BKD09_RS23795 PF01546 Peptidase family M20/M25/M40 BKD09_RS23820 PF00575 S1 RNA binding domain BKD09_RS23820 PF00773 RNB domain BKD09_RS23820 PF08206 Ribonuclease B OB domain BKD09_RS23820 PF08461 Ribonuclease R winged-helix domain BKD09_RS23820 PF17876 Cold shock domain BKD09_RS23825 PF13368 Topoisomerase C-terminal repeat BKD09_RS23825 PF01751 Toprim domain BKD09_RS23825 PF01131 DNA topoisomerase BKD09_RS23825 PF01396 Topoisomerase DNA binding C4 zinc finger BKD09_RS23835 PF01638 HxlR-like helix-turn-helix BKD09_RS23850 PF02525 Flavodoxin-like fold BKD09_RS23855 PF01638 HxlR-like helix-turn-helix BKD09_RS23860 PF17782 DprA winged helix domain BKD09_RS23860 PF02481 DNA recombination-mediator protein A BKD09_RS23875 PF01425 Amidase BKD09_RS23885 PF02660 Glycerol-3-phosphate acyltransferase BKD09_RS23890 PF01979 Amidohydrolase family BKD09_RS23895 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BKD09_RS23895 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BKD09_RS23900 PF01427 D-ala-D-ala dipeptidase BKD09_RS23915 PF03652 Holliday junction resolvase BKD09_RS23930 PF03466 LysR substrate binding domain BKD09_RS23930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS23935 PF03060 Nitronate monooxygenase BKD09_RS23940 PF03060 Nitronate monooxygenase BKD09_RS23945 PF02686 Glu-tRNAGln amidotransferase C subunit BKD09_RS23955 PF01425 Amidase BKD09_RS23965 PF02637 GatB domain BKD09_RS23965 PF02934 GatB/GatE catalytic domain BKD09_RS24090 PF00589 Phage integrase family BKD09_RS24090 PF14659 Phage integrase, N-terminal SAM-like domain BKD09_RS24090 PF13356 Arm DNA-binding domain BKD09_RS24095 PF02530 Porin subfamily BKD09_RS24105 PF14718 Soluble lytic murein transglycosylase L domain BKD09_RS24105 PF01464 Transglycosylase SLT domain BKD09_RS24110 PF00701 Dihydrodipicolinate synthetase family BKD09_RS24115 PF01741 Large-conductance mechanosensitive channel, MscL BKD09_RS24120 PF01668 SmpB protein BKD09_RS24140 PF01192 RNA polymerase Rpb6 BKD09_RS24145 PF13291 ACT domain BKD09_RS24145 PF02824 TGS domain BKD09_RS24145 PF04607 Region found in RelA / SpoT proteins BKD09_RS24150 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BKD09_RS24155 PF01648 4'-phosphopantetheinyl transferase superfamily BKD09_RS24160 PF10502 Signal peptidase, peptidase S26 BKD09_RS24165 PF00035 Double-stranded RNA binding motif BKD09_RS24165 PF14622 Ribonuclease-III-like BKD09_RS24170 PF01926 50S ribosome-binding GTPase BKD09_RS24170 PF07650 KH domain BKD09_RS24180 PF02565 Recombination protein O C terminal BKD09_RS24180 PF11967 Recombination protein O N terminal BKD09_RS24190 PF03989 DNA gyrase C-terminal domain, beta-propeller BKD09_RS24190 PF00521 DNA gyrase/topoisomerase IV, subunit A BKD09_RS24195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKD09_RS24200 PF05199 GMC oxidoreductase BKD09_RS24200 PF00732 GMC oxidoreductase BKD09_RS24215 PF09828 Chromate resistance exported protein BKD09_RS24225 PF00753 Metallo-beta-lactamase superfamily BKD09_RS24230 PF00892 EamA-like transporter family BKD09_RS24245 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS24255 PF00392 Bacterial regulatory proteins, gntR family BKD09_RS24255 PF00155 Aminotransferase class I and II BKD09_RS24265 PF01566 Natural resistance-associated macrophage protein BKD09_RS24270 PF04377 Arginine-tRNA-protein transferase, C terminus BKD09_RS24270 PF04376 Arginine-tRNA-protein transferase, N terminus BKD09_RS24280 PF00490 Delta-aminolevulinic acid dehydratase BKD09_RS24305 PF00464 Serine hydroxymethyltransferase BKD09_RS24310 PF03477 ATP cone domain BKD09_RS24315 PF01872 RibD C-terminal domain BKD09_RS24315 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BKD09_RS24320 PF00677 Lumazine binding domain BKD09_RS24325 PF00885 6,7-dimethyl-8-ribityllumazine synthase BKD09_RS24330 PF01029 NusB family BKD09_RS24335 PF00586 AIR synthase related protein, N-terminal domain BKD09_RS24335 PF02769 AIR synthase related protein, C-terminal domain BKD09_RS24345 PF03030 Inorganic H+ pyrophosphatase BKD09_RS24350 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BKD09_RS24355 PF03401 Tripartite tricarboxylate transporter family receptor BKD09_RS24375 PF02504 Fatty acid synthesis protein BKD09_RS24380 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BKD09_RS24380 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BKD09_RS24385 PF00216 Bacterial DNA-binding protein BKD09_RS24390 PF13411 MerR HTH family regulatory protein BKD09_RS24440 PF00027 Cyclic nucleotide-binding domain BKD09_RS24440 PF13545 Crp-like helix-turn-helix domain BKD09_RS24485 PF00589 Phage integrase family BKD09_RS24485 PF02899 Phage integrase, N-terminal SAM-like domain BKD09_RS24500 PF00440 Bacterial regulatory proteins, tetR family BKD09_RS24505 PF07859 alpha/beta hydrolase fold BKD09_RS24505 PF00934 PE family BKD09_RS24515 PF00701 Dihydrodipicolinate synthetase family BKD09_RS24520 PF00106 short chain dehydrogenase BKD09_RS24535 PF02530 Porin subfamily BKD09_RS24550 PF03069 Acetamidase/Formamidase family BKD09_RS24565 PF03435 Saccharopine dehydrogenase NADP binding domain BKD09_RS24570 PF03435 Saccharopine dehydrogenase NADP binding domain BKD09_RS24575 PF01494 FAD binding domain BKD09_RS24580 PF01047 MarR family BKD09_RS24590 PF02397 Bacterial sugar transferase BKD09_RS24595 PF00534 Glycosyl transferases group 1 BKD09_RS24595 PF13439 Glycosyltransferase Family 4 BKD09_RS24620 PF02628 Cytochrome oxidase assembly protein BKD09_RS24630 PF01053 Cys/Met metabolism PLP-dependent enzyme BKD09_RS24640 PF00378 Enoyl-CoA hydratase/isomerase BKD09_RS24650 PF00572 Ribosomal protein L13 BKD09_RS24655 PF00380 Ribosomal protein S9/S16 BKD09_RS24660 PF00990 Diguanylate cyclase, GGDEF domain BKD09_RS24685 PF07722 Peptidase C26 BKD09_RS24705 PF16200 C-terminal region of band_7 BKD09_RS24705 PF01145 SPFH domain / Band 7 family BKD09_RS24710 PF00710 Asparaginase, N-terminal BKD09_RS24710 PF17763 Glutaminase/Asparaginase C-terminal domain BKD09_RS24715 PF00120 Glutamine synthetase, catalytic domain BKD09_RS24715 PF03951 Glutamine synthetase, beta-Grasp domain BKD09_RS24720 PF00543 Nitrogen regulatory protein P-II BKD09_RS24725 PF03853 YjeF-related protein N-terminus BKD09_RS24725 PF01256 Carbohydrate kinase BKD09_RS24735 PF00394 Multicopper oxidase BKD09_RS24735 PF07731 Multicopper oxidase BKD09_RS24735 PF07732 Multicopper oxidase BKD09_RS24745 PF05697 Bacterial trigger factor protein (TF) BKD09_RS24745 PF05698 Bacterial trigger factor protein (TF) C-terminus BKD09_RS24745 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BKD09_RS24750 PF00574 Clp protease BKD09_RS24755 PF06689 ClpX C4-type zinc finger BKD09_RS24755 PF07724 AAA domain (Cdc48 subfamily) BKD09_RS24755 PF10431 C-terminal, D2-small domain, of ClpB protein BKD09_RS24760 PF02190 ATP-dependent protease La (LON) substrate-binding domain BKD09_RS24760 PF05362 Lon protease (S16) C-terminal proteolytic domain BKD09_RS24760 PF00004 ATPase family associated with various cellular activities (AAA) BKD09_RS24780 PF01209 ubiE/COQ5 methyltransferase family BKD09_RS24785 PF01545 Cation efflux family BKD09_RS24790 PF00873 AcrB/AcrD/AcrF family BKD09_RS24795 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BKD09_RS24795 PF00529 HlyD membrane-fusion protein of T1SS BKD09_RS24800 PF02321 Outer membrane efflux protein BKD09_RS24815 PF01546 Peptidase family M20/M25/M40 BKD09_RS24815 PF07687 Peptidase dimerisation domain BKD09_RS24820 PF00216 Bacterial DNA-binding protein BKD09_RS24835 PF07690 Major Facilitator Superfamily BKD09_RS24840 PF00355 Rieske [2Fe-2S] domain BKD09_RS24850 PF00593 TonB dependent receptor BKD09_RS24850 PF07715 TonB-dependent Receptor Plug Domain BKD09_RS24865 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BKD09_RS24870 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BKD09_RS24875 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BKD09_RS24880 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BKD09_RS24900 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BKD09_RS24900 PF10531 SLBB domain BKD09_RS24900 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BKD09_RS24905 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BKD09_RS24905 PF00384 Molybdopterin oxidoreductase BKD09_RS24905 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal BKD09_RS24910 PF00146 NADH dehydrogenase BKD09_RS24915 PF12838 4Fe-4S dicluster domain BKD09_RS24920 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BKD09_RS24925 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BKD09_RS24930 PF00361 Proton-conducting membrane transporter BKD09_RS24930 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BKD09_RS24935 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus BKD09_RS24935 PF00361 Proton-conducting membrane transporter BKD09_RS24940 PF00361 Proton-conducting membrane transporter BKD09_RS24950 PF17770 Ribonuclease J C-terminal domain BKD09_RS24950 PF12706 Beta-lactamase superfamily domain BKD09_RS24950 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BKD09_RS24970 PF01636 Phosphotransferase enzyme family BKD09_RS24980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKD09_RS24985 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS24990 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS24990 PF12911 N-terminal TM domain of oligopeptide transport permease C BKD09_RS24995 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKD09_RS24995 PF00005 ABC transporter BKD09_RS25000 PF00005 ABC transporter BKD09_RS25000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKD09_RS25025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS25025 PF03466 LysR substrate binding domain BKD09_RS25035 PF01042 Endoribonuclease L-PSP BKD09_RS25045 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS25050 PF00005 ABC transporter BKD09_RS25070 PF07715 TonB-dependent Receptor Plug Domain BKD09_RS25070 PF00593 TonB dependent receptor BKD09_RS25080 PF00578 AhpC/TSA family BKD09_RS25100 PF05425 Copper resistance protein D BKD09_RS25105 PF03129 Anticodon binding domain BKD09_RS25105 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BKD09_RS25110 PF02687 FtsX-like permease family BKD09_RS25110 PF12704 MacB-like periplasmic core domain BKD09_RS25115 PF00005 ABC transporter BKD09_RS25120 PF00107 Zinc-binding dehydrogenase BKD09_RS25120 PF08240 Alcohol dehydrogenase GroES-like domain BKD09_RS25160 PF03401 Tripartite tricarboxylate transporter family receptor BKD09_RS25165 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS25175 PF00155 Aminotransferase class I and II BKD09_RS25175 PF00392 Bacterial regulatory proteins, gntR family BKD09_RS25180 PF02627 Carboxymuconolactone decarboxylase family BKD09_RS25190 PF07690 Major Facilitator Superfamily BKD09_RS25195 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS25235 PF02811 PHP domain BKD09_RS25235 PF14579 Helix-hairpin-helix motif BKD09_RS25235 PF07733 Bacterial DNA polymerase III alpha NTPase domain BKD09_RS25235 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BKD09_RS25240 PF00484 Carbonic anhydrase BKD09_RS25250 PF00318 Ribosomal protein S2 BKD09_RS25255 PF00889 Elongation factor TS BKD09_RS25260 PF00696 Amino acid kinase family BKD09_RS25265 PF01765 Ribosome recycling factor BKD09_RS25270 PF01255 Putative undecaprenyl diphosphate synthase BKD09_RS25280 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BKD09_RS25280 PF13288 DXP reductoisomerase C-terminal domain BKD09_RS25280 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BKD09_RS25285 PF02163 Peptidase family M50 BKD09_RS25285 PF17820 PDZ domain BKD09_RS25290 PF01103 Surface antigen BKD09_RS25290 PF07244 Surface antigen variable number repeat BKD09_RS25295 PF00132 Bacterial transferase hexapeptide (six repeats) BKD09_RS25295 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BKD09_RS25300 PF07977 FabA-like domain BKD09_RS25310 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BKD09_RS25310 PF00132 Bacterial transferase hexapeptide (six repeats) BKD09_RS25320 PF02684 Lipid-A-disaccharide synthetase BKD09_RS25330 PF00005 ABC transporter BKD09_RS25330 PF17912 MalK OB fold domain BKD09_RS25335 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS25340 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS25345 PF01547 Bacterial extracellular solute-binding protein BKD09_RS25360 PF00285 Citrate synthase, C-terminal domain BKD09_RS25365 PF00749 tRNA synthetases class I (E and Q), catalytic domain BKD09_RS25370 PF00749 tRNA synthetases class I (E and Q), catalytic domain BKD09_RS25370 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BKD09_RS25405 PF00717 Peptidase S24-like BKD09_RS25405 PF01726 LexA DNA binding domain BKD09_RS25410 PF00994 Probable molybdopterin binding domain BKD09_RS25410 PF03454 MoeA C-terminal region (domain IV) BKD09_RS25410 PF03453 MoeA N-terminal region (domain I and II) BKD09_RS25420 PF13419 Haloacid dehalogenase-like hydrolase BKD09_RS25425 PF01070 FMN-dependent dehydrogenase BKD09_RS25430 PF03572 Peptidase family S41 BKD09_RS25430 PF13180 PDZ domain BKD09_RS25435 PF13188 PAS domain BKD09_RS25435 PF03707 Bacterial signalling protein N terminal repeat BKD09_RS25435 PF00990 Diguanylate cyclase, GGDEF domain BKD09_RS25435 PF00563 EAL domain BKD09_RS25450 PF01425 Amidase BKD09_RS25460 PF01967 MoaC family BKD09_RS25465 PF00218 Indole-3-glycerol phosphate synthase BKD09_RS25470 PF00591 Glycosyl transferase family, a/b domain BKD09_RS25470 PF02885 Glycosyl transferase family, helical bundle domain BKD09_RS25475 PF13145 PPIC-type PPIASE domain BKD09_RS25480 PF00121 Triosephosphate isomerase BKD09_RS25490 PF00117 Glutamine amidotransferase class-I BKD09_RS25490 PF06418 CTP synthase N-terminus BKD09_RS25495 PF00398 Ribosomal RNA adenine dimethylase BKD09_RS25500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS25500 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS25500 PF00672 HAMP domain BKD09_RS25505 PF00072 Response regulator receiver domain BKD09_RS25505 PF00486 Transcriptional regulatory protein, C terminal BKD09_RS25515 PF00793 DAHP synthetase I family BKD09_RS25520 PF07690 Major Facilitator Superfamily BKD09_RS25525 PF08269 Cache domain BKD09_RS25525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BKD09_RS25530 PF03328 HpcH/HpaI aldolase/citrate lyase family BKD09_RS25535 PF02515 CoA-transferase family III BKD09_RS25540 PF00005 ABC transporter BKD09_RS25540 PF08402 TOBE domain BKD09_RS25545 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS25565 PF14489 QueF-like protein BKD09_RS25575 PF00113 Enolase, C-terminal TIM barrel domain BKD09_RS25575 PF03952 Enolase, N-terminal domain BKD09_RS25590 PF03358 NADPH-dependent FMN reductase BKD09_RS25605 PF00171 Aldehyde dehydrogenase family BKD09_RS25615 PF00676 Dehydrogenase E1 component BKD09_RS25620 PF02780 Transketolase, C-terminal domain BKD09_RS25620 PF02779 Transketolase, pyrimidine binding domain BKD09_RS25620 PF00364 Biotin-requiring enzyme BKD09_RS25630 PF14437 MafB19-like deaminase BKD09_RS25635 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BKD09_RS25635 PF00364 Biotin-requiring enzyme BKD09_RS25635 PF02817 e3 binding domain BKD09_RS25645 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKD09_RS25645 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BKD09_RS25650 PF00291 Pyridoxal-phosphate dependent enzyme BKD09_RS25655 PF03401 Tripartite tricarboxylate transporter family receptor BKD09_RS25660 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS25660 PF00072 Response regulator receiver domain BKD09_RS25665 PF00072 Response regulator receiver domain BKD09_RS25665 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS25670 PF13493 Domain of unknown function (DUF4118) BKD09_RS25670 PF13426 PAS domain BKD09_RS25670 PF08447 PAS fold BKD09_RS25670 PF00989 PAS fold BKD09_RS25670 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS25670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS25685 PF01464 Transglycosylase SLT domain BKD09_RS25685 PF14718 Soluble lytic murein transglycosylase L domain BKD09_RS25690 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS25690 PF00672 HAMP domain BKD09_RS25715 PF00593 TonB dependent receptor BKD09_RS25715 PF07715 TonB-dependent Receptor Plug Domain BKD09_RS25745 PF03477 ATP cone domain BKD09_RS25745 PF02867 Ribonucleotide reductase, barrel domain BKD09_RS25745 PF00317 Ribonucleotide reductase, all-alpha domain BKD09_RS25750 PF00268 Ribonucleotide reductase, small chain BKD09_RS25760 PF00920 Dehydratase family BKD09_RS25765 PF08238 Sel1 repeat BKD09_RS25770 PF03372 Endonuclease/Exonuclease/phosphatase family BKD09_RS25775 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS25775 PF18415 Histidine kinase receptor ArcB trans-membrane domain BKD09_RS25775 PF01627 Hpt domain BKD09_RS25775 PF00989 PAS fold BKD09_RS25775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS25775 PF00072 Response regulator receiver domain BKD09_RS25790 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BKD09_RS25795 PF01521 Iron-sulphur cluster biosynthesis BKD09_RS25800 PF01966 HD domain BKD09_RS25800 PF13286 Phosphohydrolase-associated domain BKD09_RS25805 PF00750 tRNA synthetases class I (R) BKD09_RS25805 PF05746 DALR anticodon binding domain BKD09_RS25805 PF03485 Arginyl tRNA synthetase N terminal domain BKD09_RS25815 PF00933 Glycosyl hydrolase family 3 N terminal domain BKD09_RS25820 PF02616 Segregation and condensation protein ScpA BKD09_RS25825 PF04079 Segregation and condensation complex subunit ScpB BKD09_RS25830 PF02416 mttA/Hcf106 family BKD09_RS25835 PF02416 mttA/Hcf106 family BKD09_RS25840 PF00902 Sec-independent protein translocase protein (TatC) BKD09_RS25845 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BKD09_RS25845 PF02403 Seryl-tRNA synthetase N-terminal domain BKD09_RS25855 PF01975 Survival protein SurE BKD09_RS25870 PF01476 LysM domain BKD09_RS25870 PF01551 Peptidase family M23 BKD09_RS25875 PF03781 Sulfatase-modifying factor enzyme 1 BKD09_RS25880 PF00884 Sulfatase BKD09_RS25885 PF00884 Sulfatase BKD09_RS25905 PF00230 Major intrinsic protein BKD09_RS25910 PF01914 MarC family integral membrane protein BKD09_RS25915 PF13505 Outer membrane protein beta-barrel domain BKD09_RS25935 PF02699 Preprotein translocase subunit BKD09_RS25940 PF02355 Protein export membrane protein BKD09_RS25940 PF07549 SecD/SecF GG Motif BKD09_RS25945 PF07549 SecD/SecF GG Motif BKD09_RS25945 PF02355 Protein export membrane protein BKD09_RS25960 PF13291 ACT domain BKD09_RS25960 PF00291 Pyridoxal-phosphate dependent enzyme BKD09_RS25965 PF00266 Aminotransferase class-V BKD09_RS25970 PF03466 LysR substrate binding domain BKD09_RS25970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS25975 PF02515 CoA-transferase family III BKD09_RS25980 PF00682 HMGL-like BKD09_RS25985 PF07690 Major Facilitator Superfamily BKD09_RS25995 PF00188 Cysteine-rich secretory protein family BKD09_RS26005 PF01134 Glucose inhibited division protein A BKD09_RS26065 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS26065 PF00501 AMP-binding enzyme BKD09_RS26095 PF01156 Inosine-uridine preferring nucleoside hydrolase BKD09_RS26100 PF13419 Haloacid dehalogenase-like hydrolase BKD09_RS26120 PF17755 UvrA DNA-binding domain BKD09_RS26120 PF00005 ABC transporter BKD09_RS26120 PF17760 UvrA interaction domain BKD09_RS26135 PF13505 Outer membrane protein beta-barrel domain BKD09_RS26145 PF00436 Single-strand binding protein family BKD09_RS26155 PF00521 DNA gyrase/topoisomerase IV, subunit A BKD09_RS26155 PF03989 DNA gyrase C-terminal domain, beta-propeller BKD09_RS26170 PF00593 TonB dependent receptor BKD09_RS26170 PF07715 TonB-dependent Receptor Plug Domain BKD09_RS26175 PF02705 K+ potassium transporter BKD09_RS26185 PF01467 Cytidylyltransferase-like BKD09_RS26190 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BKD09_RS26200 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BKD09_RS26205 PF02547 Queuosine biosynthesis protein BKD09_RS26210 PF02774 Semialdehyde dehydrogenase, dimerisation domain BKD09_RS26210 PF01118 Semialdehyde dehydrogenase, NAD binding domain BKD09_RS26220 PF00440 Bacterial regulatory proteins, tetR family BKD09_RS26220 PF16859 Tetracyclin repressor-like, C-terminal domain BKD09_RS26230 PF01702 Queuine tRNA-ribosyltransferase BKD09_RS26240 PF00291 Pyridoxal-phosphate dependent enzyme BKD09_RS26250 PF00005 ABC transporter BKD09_RS26255 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS26260 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS26270 PF01266 FAD dependent oxidoreductase BKD09_RS26275 PF03466 LysR substrate binding domain BKD09_RS26275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS26305 PF02911 Formyl transferase, C-terminal domain BKD09_RS26305 PF00551 Formyl transferase BKD09_RS26330 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS26330 PF00501 AMP-binding enzyme BKD09_RS26345 PF01594 AI-2E family transporter BKD09_RS26440 PF12804 MobA-like NTP transferase domain BKD09_RS26440 PF00132 Bacterial transferase hexapeptide (six repeats) BKD09_RS26455 PF01380 SIS domain BKD09_RS26475 PF02558 Ketopantoate reductase PanE/ApbA BKD09_RS26475 PF08546 Ketopantoate reductase PanE/ApbA C terminal BKD09_RS26480 PF17191 RecG wedge domain BKD09_RS26480 PF00271 Helicase conserved C-terminal domain BKD09_RS26480 PF00270 DEAD/DEAH box helicase BKD09_RS26500 PF00106 short chain dehydrogenase BKD09_RS26505 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BKD09_RS26510 PF01799 [2Fe-2S] binding domain BKD09_RS26510 PF00111 2Fe-2S iron-sulfur cluster binding domain BKD09_RS26515 PF03466 LysR substrate binding domain BKD09_RS26515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS26530 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKD09_RS26545 PF03547 Membrane transport protein BKD09_RS26550 PF01494 FAD binding domain BKD09_RS26560 PF03741 Integral membrane protein TerC family BKD09_RS26560 PF03471 Transporter associated domain BKD09_RS26565 PF00107 Zinc-binding dehydrogenase BKD09_RS26565 PF08240 Alcohol dehydrogenase GroES-like domain BKD09_RS26570 PF00202 Aminotransferase class-III BKD09_RS26590 PF13411 MerR HTH family regulatory protein BKD09_RS26595 PF02627 Carboxymuconolactone decarboxylase family BKD09_RS26600 PF00919 Uncharacterized protein family UPF0004 BKD09_RS26600 PF18693 TRAM domain BKD09_RS26600 PF04055 Radical SAM superfamily BKD09_RS26605 PF08376 Nitrate and nitrite sensing BKD09_RS26605 PF03861 ANTAR domain BKD09_RS26615 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BKD09_RS26615 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BKD09_RS26620 PF00667 FAD binding domain BKD09_RS26620 PF00258 Flavodoxin BKD09_RS26620 PF00175 Oxidoreductase NAD-binding domain BKD09_RS26625 PF03746 LamB/YcsF family BKD09_RS26630 PF02626 Carboxyltransferase domain, subdomain A and B BKD09_RS26640 PF00180 Isocitrate/isopropylmalate dehydrogenase BKD09_RS26640 PF03737 Aldolase/RraA BKD09_RS26665 PF00497 Bacterial extracellular solute-binding proteins, family 3 BKD09_RS26680 PF01842 ACT domain BKD09_RS26680 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BKD09_RS26680 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BKD09_RS26685 PF00005 ABC transporter BKD09_RS26685 PF08402 TOBE domain BKD09_RS26690 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS26695 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS26710 PF03861 ANTAR domain BKD09_RS26710 PF00072 Response regulator receiver domain BKD09_RS26725 PF02685 Glucokinase BKD09_RS26730 PF00857 Isochorismatase family BKD09_RS26735 PF00561 alpha/beta hydrolase fold BKD09_RS26740 PF00795 Carbon-nitrogen hydrolase BKD09_RS26740 PF02540 NAD synthase BKD09_RS26755 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKD09_RS26760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKD09_RS26760 PF00005 ABC transporter BKD09_RS26765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKD09_RS26765 PF00005 ABC transporter BKD09_RS26770 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS26775 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS26775 PF12911 N-terminal TM domain of oligopeptide transport permease C BKD09_RS26785 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding BKD09_RS26800 PF00920 Dehydratase family BKD09_RS26815 PF11339 Protein of unknown function (DUF3141) BKD09_RS26820 PF01515 Phosphate acetyl/butaryl transferase BKD09_RS26825 PF00871 Acetokinase family BKD09_RS26835 PF01575 MaoC like domain BKD09_RS26840 PF01144 Coenzyme A transferase BKD09_RS26845 PF01144 Coenzyme A transferase BKD09_RS26860 PF00561 alpha/beta hydrolase fold BKD09_RS26875 PF01914 MarC family integral membrane protein BKD09_RS26880 PF13454 FAD-NAD(P)-binding BKD09_RS26890 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS26890 PF13191 AAA ATPase domain BKD09_RS26935 PF07731 Multicopper oxidase BKD09_RS26935 PF07732 Multicopper oxidase BKD09_RS26940 PF01965 DJ-1/PfpI family BKD09_RS26960 PF03350 Uncharacterized protein family, UPF0114 BKD09_RS26970 PF03330 Lytic transglycolase BKD09_RS27000 PF00561 alpha/beta hydrolase fold BKD09_RS27005 PF00768 D-alanyl-D-alanine carboxypeptidase BKD09_RS27005 PF07943 Penicillin-binding protein 5, C-terminal domain BKD09_RS27010 PF02223 Thymidylate kinase BKD09_RS27015 PF09115 DNA polymerase III, delta subunit, C terminal BKD09_RS27020 PF09334 tRNA synthetases class I (M) BKD09_RS27020 PF08264 Anticodon-binding domain of tRNA BKD09_RS27025 PF01026 TatD related DNase BKD09_RS27030 PF12706 Beta-lactamase superfamily domain BKD09_RS27030 PF03099 Biotin/lipoate A/B protein ligase family BKD09_RS27035 PF00501 AMP-binding enzyme BKD09_RS27035 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS27040 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BKD09_RS27045 PF03480 Bacterial extracellular solute-binding protein, family 7 BKD09_RS27050 PF02146 Sir2 family BKD09_RS27065 PF00145 C-5 cytosine-specific DNA methylase BKD09_RS27070 PF04480 Protein of unknown function (DUF559) BKD09_RS27070 PF03852 DNA mismatch endonuclease Vsr BKD09_RS27140 PF00580 UvrD/REP helicase N-terminal domain BKD09_RS27140 PF13361 UvrD-like helicase C-terminal domain BKD09_RS27170 PF01551 Peptidase family M23 BKD09_RS27170 PF08460 Bacterial SH3 domain BKD09_RS27215 PF00004 ATPase family associated with various cellular activities (AAA) BKD09_RS27215 PF01434 Peptidase family M41 BKD09_RS27215 PF06480 FtsH Extracellular BKD09_RS27215 PF17862 AAA+ lid domain BKD09_RS27220 PF00589 Phage integrase family BKD09_RS27220 PF02899 Phage integrase, N-terminal SAM-like domain BKD09_RS27260 PF00881 Nitroreductase family BKD09_RS27270 PF03466 LysR substrate binding domain BKD09_RS27270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS27280 PF03466 LysR substrate binding domain BKD09_RS27280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS27285 PF00857 Isochorismatase family BKD09_RS27300 PF07724 AAA domain (Cdc48 subfamily) BKD09_RS27300 PF10431 C-terminal, D2-small domain, of ClpB protein BKD09_RS27300 PF06689 ClpX C4-type zinc finger BKD09_RS27320 PF02727 Copper amine oxidase, N2 domain BKD09_RS27320 PF02728 Copper amine oxidase, N3 domain BKD09_RS27320 PF01179 Copper amine oxidase, enzyme domain BKD09_RS27325 PF00144 Beta-lactamase BKD09_RS27335 PF03180 NLPA lipoprotein BKD09_RS27340 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS27345 PF09383 NIL domain BKD09_RS27345 PF00005 ABC transporter BKD09_RS27350 PF00939 Sodium:sulfate symporter transmembrane region BKD09_RS27355 PF00378 Enoyl-CoA hydratase/isomerase BKD09_RS27360 PF02979 Nitrile hydratase, alpha chain BKD09_RS27365 PF02211 Nitrile hydratase beta subunit BKD09_RS27375 PF06508 Queuosine biosynthesis protein QueC BKD09_RS27380 PF03819 MazG nucleotide pyrophosphohydrolase domain BKD09_RS27390 PF01926 50S ribosome-binding GTPase BKD09_RS27390 PF13167 GTP-binding GTPase N-terminal BKD09_RS27390 PF16360 GTP-binding GTPase Middle Region BKD09_RS27395 PF17209 Hfq protein BKD09_RS27400 PF00158 Sigma-54 interaction domain BKD09_RS27400 PF02954 Bacterial regulatory protein, Fis family BKD09_RS27400 PF00072 Response regulator receiver domain BKD09_RS27405 PF00989 PAS fold BKD09_RS27405 PF00672 HAMP domain BKD09_RS27405 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS27405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS27415 PF00072 Response regulator receiver domain BKD09_RS27415 PF00158 Sigma-54 interaction domain BKD09_RS27415 PF02954 Bacterial regulatory protein, Fis family BKD09_RS27420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS27420 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS27420 PF00989 PAS fold BKD09_RS27425 PF01207 Dihydrouridine synthase (Dus) BKD09_RS27430 PF02542 YgbB family BKD09_RS27430 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BKD09_RS27435 PF00994 Probable molybdopterin binding domain BKD09_RS27435 PF02464 Competence-damaged protein BKD09_RS27445 PF00034 Cytochrome c BKD09_RS27450 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BKD09_RS27450 PF00034 Cytochrome c BKD09_RS27465 PF00115 Cytochrome C and Quinol oxidase polypeptide I BKD09_RS27470 PF00034 Cytochrome c BKD09_RS27475 PF03364 Polyketide cyclase / dehydrase and lipid transport BKD09_RS27480 PF04055 Radical SAM superfamily BKD09_RS27485 PF02245 Methylpurine-DNA glycosylase (MPG) BKD09_RS27490 PF08264 Anticodon-binding domain of tRNA BKD09_RS27490 PF10458 Valyl tRNA synthetase tRNA binding arm BKD09_RS27490 PF00133 tRNA synthetases class I (I, L, M and V) BKD09_RS27500 PF02321 Outer membrane efflux protein BKD09_RS27520 PF00672 HAMP domain BKD09_RS27520 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS27520 PF02743 Cache domain BKD09_RS27540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BKD09_RS27540 PF00529 HlyD membrane-fusion protein of T1SS BKD09_RS27545 PF11742 Protein of unknown function (DUF3302) BKD09_RS27555 PF00884 Sulfatase BKD09_RS27565 PF13519 von Willebrand factor type A domain BKD09_RS27565 PF07584 Aerotolerance regulator N-terminal BKD09_RS27580 PF01882 Protein of unknown function DUF58 BKD09_RS27585 PF07726 ATPase family associated with various cellular activities (AAA) BKD09_RS27585 PF17863 AAA lid domain BKD09_RS27590 PF00884 Sulfatase BKD09_RS27595 PF03781 Sulfatase-modifying factor enzyme 1 BKD09_RS27620 PF01145 SPFH domain / Band 7 family BKD09_RS27620 PF15975 Flotillin BKD09_RS27635 PF01042 Endoribonuclease L-PSP BKD09_RS27640 PF03069 Acetamidase/Formamidase family BKD09_RS27645 PF03069 Acetamidase/Formamidase family BKD09_RS27650 PF00005 ABC transporter BKD09_RS27670 PF00005 ABC transporter BKD09_RS27675 PF01061 ABC-2 type transporter BKD09_RS27690 PF00873 AcrB/AcrD/AcrF family BKD09_RS27695 PF00873 AcrB/AcrD/AcrF family BKD09_RS27700 PF13533 Biotin-lipoyl like BKD09_RS27705 PF02321 Outer membrane efflux protein BKD09_RS27715 PF00291 Pyridoxal-phosphate dependent enzyme BKD09_RS27720 PF00005 ABC transporter BKD09_RS27725 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS27730 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS27735 PF00497 Bacterial extracellular solute-binding proteins, family 3 BKD09_RS27740 PF01053 Cys/Met metabolism PLP-dependent enzyme BKD09_RS27745 PF02690 Na+/Pi-cotransporter BKD09_RS27755 PF00535 Glycosyl transferase family 2 BKD09_RS27760 PF01569 PAP2 superfamily BKD09_RS27765 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase BKD09_RS27770 PF06832 Penicillin-Binding Protein C-terminus Family BKD09_RS27770 PF00905 Penicillin binding protein transpeptidase domain BKD09_RS27770 PF00912 Transglycosylase BKD09_RS27775 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain BKD09_RS27775 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain BKD09_RS27775 PF00207 Alpha-2-macroglobulin family BKD09_RS27775 PF17962 Bacterial macroglobulin domain 6 BKD09_RS27775 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain BKD09_RS27775 PF11974 Bacterial alpha-2-macroglobulin MG3 domain BKD09_RS27775 PF07703 Alpha-2-macroglobulin bait region domain BKD09_RS27775 PF01835 MG2 domain BKD09_RS27825 PF03480 Bacterial extracellular solute-binding protein, family 7 BKD09_RS27835 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BKD09_RS27840 PF00392 Bacterial regulatory proteins, gntR family BKD09_RS27850 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BKD09_RS27855 PF03480 Bacterial extracellular solute-binding protein, family 7 BKD09_RS27860 PF00701 Dihydrodipicolinate synthetase family BKD09_RS27865 PF00682 HMGL-like BKD09_RS27870 PF02785 Biotin carboxylase C-terminal domain BKD09_RS27870 PF00364 Biotin-requiring enzyme BKD09_RS27870 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BKD09_RS27870 PF18140 Propionyl-coenzyme A carboxylase BT domain BKD09_RS27870 PF00289 Biotin carboxylase, N-terminal domain BKD09_RS27875 PF01039 Carboxyl transferase domain BKD09_RS27880 PF02770 Acyl-CoA dehydrogenase, middle domain BKD09_RS27880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BKD09_RS27880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BKD09_RS27885 PF02311 AraC-like ligand binding domain BKD09_RS27885 PF12833 Helix-turn-helix domain BKD09_RS27895 PF01037 Lrp/AsnC ligand binding domain BKD09_RS27935 PF00313 'Cold-shock' DNA-binding domain BKD09_RS27940 PF02146 Sir2 family BKD09_RS27975 PF00216 Bacterial DNA-binding protein BKD09_RS28055 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BKD09_RS28060 PF00043 Glutathione S-transferase, C-terminal domain BKD09_RS28060 PF13417 Glutathione S-transferase, N-terminal domain BKD09_RS28180 PF00793 DAHP synthetase I family BKD09_RS28190 PF04055 Radical SAM superfamily BKD09_RS28190 PF12544 Lysine-2,3-aminomutase BKD09_RS28195 PF00152 tRNA synthetases class II (D, K and N) BKD09_RS28200 PF08207 Elongation factor P (EF-P) KOW-like domain BKD09_RS28200 PF01132 Elongation factor P (EF-P) OB domain BKD09_RS28200 PF09285 Elongation factor P, C-terminal BKD09_RS28215 PF02627 Carboxymuconolactone decarboxylase family BKD09_RS28255 PF01368 DHH family BKD09_RS28255 PF02272 DHHA1 domain BKD09_RS28255 PF17768 RecJ OB domain BKD09_RS28260 PF00672 HAMP domain BKD09_RS28260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BKD09_RS28260 PF17200 Single Cache domain 2 BKD09_RS28310 PF03466 LysR substrate binding domain BKD09_RS28310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS28315 PF13419 Haloacid dehalogenase-like hydrolase BKD09_RS28320 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BKD09_RS28325 PF03447 Homoserine dehydrogenase, NAD binding domain BKD09_RS28325 PF00742 Homoserine dehydrogenase BKD09_RS28325 PF01842 ACT domain BKD09_RS28330 PF00155 Aminotransferase class I and II BKD09_RS28340 PF00561 alpha/beta hydrolase fold BKD09_RS28340 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus BKD09_RS28355 PF02774 Semialdehyde dehydrogenase, dimerisation domain BKD09_RS28355 PF01118 Semialdehyde dehydrogenase, NAD binding domain BKD09_RS28360 PF01118 Semialdehyde dehydrogenase, NAD binding domain BKD09_RS28370 PF00753 Metallo-beta-lactamase superfamily BKD09_RS28375 PF09335 SNARE associated Golgi protein BKD09_RS28380 PF00986 DNA gyrase B subunit, carboxyl terminus BKD09_RS28380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS28380 PF00204 DNA gyrase B BKD09_RS28380 PF01751 Toprim domain BKD09_RS28415 PF01494 FAD binding domain BKD09_RS28435 PF00271 Helicase conserved C-terminal domain BKD09_RS28435 PF00270 DEAD/DEAH box helicase BKD09_RS28440 PF00072 Response regulator receiver domain BKD09_RS28440 PF00990 Diguanylate cyclase, GGDEF domain BKD09_RS28445 PF07977 FabA-like domain BKD09_RS28455 PF01521 Iron-sulphur cluster biosynthesis BKD09_RS28465 PF00266 Aminotransferase class-V BKD09_RS28470 PF01458 Uncharacterized protein family (UPF0051) BKD09_RS28475 PF00005 ABC transporter BKD09_RS28480 PF01458 Uncharacterized protein family (UPF0051) BKD09_RS28485 PF00266 Aminotransferase class-V BKD09_RS28490 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BKD09_RS28500 PF00893 Small Multidrug Resistance protein BKD09_RS28505 PF14497 Glutathione S-transferase, C-terminal domain BKD09_RS28505 PF13417 Glutathione S-transferase, N-terminal domain BKD09_RS28510 PF03702 Anhydro-N-acetylmuramic acid kinase BKD09_RS28515 PF00579 tRNA synthetases class I (W and Y) BKD09_RS28520 PF07690 Major Facilitator Superfamily BKD09_RS28525 PF07681 DoxX BKD09_RS28545 PF00578 AhpC/TSA family BKD09_RS28550 PF01476 LysM domain BKD09_RS28550 PF08525 Opacity-associated protein A N-terminal motif BKD09_RS28550 PF01551 Peptidase family M23 BKD09_RS28565 PF13439 Glycosyltransferase Family 4 BKD09_RS28570 PF00005 ABC transporter BKD09_RS28575 PF00534 Glycosyl transferases group 1 BKD09_RS28575 PF13439 Glycosyltransferase Family 4 BKD09_RS28595 PF00892 EamA-like transporter family BKD09_RS28605 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BKD09_RS28605 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BKD09_RS28610 PF03462 PCRF domain BKD09_RS28610 PF00472 RF-1 domain BKD09_RS28615 PF00905 Penicillin binding protein transpeptidase domain BKD09_RS28615 PF17092 Penicillin-binding protein OB-like domain BKD09_RS28615 PF00912 Transglycosylase BKD09_RS28620 PF11741 AMIN domain BKD09_RS28620 PF01520 N-acetylmuramoyl-L-alanine amidase BKD09_RS28625 PF00575 S1 RNA binding domain BKD09_RS28625 PF10150 Ribonuclease E/G family BKD09_RS28625 PF10150 Ribonuclease E/G family BKD09_RS28625 PF12111 Polyribonucleotide phosphorylase C terminal BKD09_RS28625 PF00575 S1 RNA binding domain BKD09_RS28625 PF12111 Polyribonucleotide phosphorylase C terminal BKD09_RS28630 PF01266 FAD dependent oxidoreductase BKD09_RS28645 PF00375 Sodium:dicarboxylate symporter family BKD09_RS28650 PF02632 BioY family BKD09_RS28655 PF00155 Aminotransferase class I and II BKD09_RS28675 PF01220 Dehydroquinase class II BKD09_RS28680 PF00364 Biotin-requiring enzyme BKD09_RS28685 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BKD09_RS28685 PF00289 Biotin carboxylase, N-terminal domain BKD09_RS28685 PF02785 Biotin carboxylase C-terminal domain BKD09_RS28690 PF00672 HAMP domain BKD09_RS28690 PF00989 PAS fold BKD09_RS28690 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS28690 PF18698 Histidine kinase sensor domain BKD09_RS28690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS28695 PF00072 Response regulator receiver domain BKD09_RS28700 PF13581 Histidine kinase-like ATPase domain BKD09_RS28700 PF13426 PAS domain BKD09_RS28700 PF07568 Histidine kinase BKD09_RS28705 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BKD09_RS28715 PF07859 alpha/beta hydrolase fold BKD09_RS28725 PF16123 Hydroxyacylglutathione hydrolase C-terminus BKD09_RS28725 PF00753 Metallo-beta-lactamase superfamily BKD09_RS28730 PF01209 ubiE/COQ5 methyltransferase family BKD09_RS28735 PF01965 DJ-1/PfpI family BKD09_RS28735 PF12833 Helix-turn-helix domain BKD09_RS28740 PF01965 DJ-1/PfpI family BKD09_RS28755 PF00486 Transcriptional regulatory protein, C terminal BKD09_RS28755 PF00072 Response regulator receiver domain BKD09_RS28760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS28760 PF00072 Response regulator receiver domain BKD09_RS28760 PF13426 PAS domain BKD09_RS28775 PF00892 EamA-like transporter family BKD09_RS28780 PF02867 Ribonucleotide reductase, barrel domain BKD09_RS28780 PF08471 Class II vitamin B12-dependent ribonucleotide reductase BKD09_RS28855 PF08274 PhnA Zinc-Ribbon BKD09_RS28855 PF03831 PhnA domain BKD09_RS28875 PF06029 AlkA N-terminal domain BKD09_RS28875 PF00730 HhH-GPD superfamily base excision DNA repair protein BKD09_RS28875 PF02805 Metal binding domain of Ada BKD09_RS28875 PF12833 Helix-turn-helix domain BKD09_RS28895 PF08543 Phosphomethylpyrimidine kinase BKD09_RS28905 PF00440 Bacterial regulatory proteins, tetR family BKD09_RS28915 PF00893 Small Multidrug Resistance protein BKD09_RS28920 PF17932 Tetracyclin repressor-like, C-terminal domain BKD09_RS28920 PF00440 Bacterial regulatory proteins, tetR family BKD09_RS28945 PF01494 FAD binding domain BKD09_RS28945 PF07976 Phenol hydroxylase, C-terminal dimerisation domain BKD09_RS28960 PF03734 L,D-transpeptidase catalytic domain BKD09_RS28960 PF17969 L,D-transpeptidase C-terminal domain BKD09_RS28995 PF03776 Septum formation topological specificity factor MinE BKD09_RS29000 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BKD09_RS29005 PF03775 Septum formation inhibitor MinC, C-terminal domain BKD09_RS29005 PF05209 Septum formation inhibitor MinC, N-terminal domain BKD09_RS29010 PF02548 Ketopantoate hydroxymethyltransferase BKD09_RS29015 PF03781 Sulfatase-modifying factor enzyme 1 BKD09_RS29020 PF16347 Domain of unknown function (DUF4976) BKD09_RS29020 PF00884 Sulfatase BKD09_RS29030 PF02743 Cache domain BKD09_RS29030 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS29030 PF00672 HAMP domain BKD09_RS29040 PF00440 Bacterial regulatory proteins, tetR family BKD09_RS29045 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS29065 PF00005 ABC transporter BKD09_RS29080 PF03480 Bacterial extracellular solute-binding protein, family 7 BKD09_RS29100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BKD09_RS29110 PF12833 Helix-turn-helix domain BKD09_RS29125 PF01966 HD domain BKD09_RS29125 PF11871 Domain of unknown function (DUF3391) BKD09_RS29140 PF07859 alpha/beta hydrolase fold BKD09_RS29170 PF03330 Lytic transglycolase BKD09_RS29175 PF12706 Beta-lactamase superfamily domain BKD09_RS29180 PF03009 Glycerophosphoryl diester phosphodiesterase family BKD09_RS29185 PF12848 ABC transporter BKD09_RS29185 PF00005 ABC transporter BKD09_RS29230 PF03951 Glutamine synthetase, beta-Grasp domain BKD09_RS29230 PF00120 Glutamine synthetase, catalytic domain BKD09_RS29250 PF13350 Tyrosine phosphatase family BKD09_RS29290 PF01497 Periplasmic binding protein BKD09_RS29295 PF00266 Aminotransferase class-V BKD09_RS29300 PF03301 Tryptophan 2,3-dioxygenase BKD09_RS29310 PF07687 Peptidase dimerisation domain BKD09_RS29310 PF01546 Peptidase family M20/M25/M40 BKD09_RS29320 PF00155 Aminotransferase class I and II BKD09_RS29320 PF00392 Bacterial regulatory proteins, gntR family BKD09_RS29345 PF05981 CreA protein BKD09_RS29355 PF00255 Glutathione peroxidase BKD09_RS29360 PF01522 Polysaccharide deacetylase BKD09_RS29370 PF13505 Outer membrane protein beta-barrel domain BKD09_RS29380 PF01515 Phosphate acetyl/butaryl transferase BKD09_RS29380 PF03949 Malic enzyme, NAD binding domain BKD09_RS29380 PF00390 Malic enzyme, N-terminal domain BKD09_RS29390 PF01336 OB-fold nucleic acid binding domain BKD09_RS29390 PF02938 GAD domain BKD09_RS29390 PF00152 tRNA synthetases class II (D, K and N) BKD09_RS29395 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BKD09_RS29400 PF01797 Transposase IS200 like BKD09_RS29415 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS29420 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS29425 PF13416 Bacterial extracellular solute-binding protein BKD09_RS29430 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS29435 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS29440 PF00005 ABC transporter BKD09_RS29440 PF08402 TOBE domain BKD09_RS29450 PF00392 Bacterial regulatory proteins, gntR family BKD09_RS29450 PF07729 FCD domain BKD09_RS29455 PF08240 Alcohol dehydrogenase GroES-like domain BKD09_RS29455 PF00107 Zinc-binding dehydrogenase BKD09_RS29460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS29460 PF03466 LysR substrate binding domain BKD09_RS29465 PF01612 3'-5' exonuclease BKD09_RS29465 PF00570 HRDC domain BKD09_RS29470 PF00202 Aminotransferase class-III BKD09_RS29475 PF07690 Major Facilitator Superfamily BKD09_RS29485 PF01494 FAD binding domain BKD09_RS29515 PF00313 'Cold-shock' DNA-binding domain BKD09_RS29520 PF00551 Formyl transferase BKD09_RS29525 PF00586 AIR synthase related protein, N-terminal domain BKD09_RS29525 PF02769 AIR synthase related protein, C-terminal domain BKD09_RS29530 PF01066 CDP-alcohol phosphatidyltransferase BKD09_RS29540 PF17941 Polyphosphate kinase C-terminal domain 1 BKD09_RS29540 PF13089 Polyphosphate kinase N-terminal domain BKD09_RS29540 PF02503 Polyphosphate kinase middle domain BKD09_RS29540 PF13090 Polyphosphate kinase C-terminal domain 2 BKD09_RS29545 PF02541 Ppx/GppA phosphatase family BKD09_RS29555 PF00593 TonB dependent receptor BKD09_RS29555 PF07715 TonB-dependent Receptor Plug Domain BKD09_RS29560 PF03741 Integral membrane protein TerC family BKD09_RS29565 PF00334 Nucleoside diphosphate kinase BKD09_RS29580 PF12848 ABC transporter BKD09_RS29580 PF00005 ABC transporter BKD09_RS29585 PF03401 Tripartite tricarboxylate transporter family receptor BKD09_RS29595 PF03412 Peptidase C39 family BKD09_RS29595 PF00005 ABC transporter BKD09_RS29595 PF00664 ABC transporter transmembrane region BKD09_RS29615 PF00883 Cytosol aminopeptidase family, catalytic domain BKD09_RS29615 PF02789 Cytosol aminopeptidase family, N-terminal domain BKD09_RS29620 PF03739 Lipopolysaccharide export system permease LptF/LptG BKD09_RS29630 PF04453 LPS transport system D BKD09_RS29630 PF03968 OstA-like protein BKD09_RS29640 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BKD09_RS29645 PF00398 Ribosomal RNA adenine dimethylase BKD09_RS29650 PF08240 Alcohol dehydrogenase GroES-like domain BKD09_RS29650 PF00107 Zinc-binding dehydrogenase BKD09_RS29700 PF00625 Guanylate kinase BKD09_RS29705 PF08340 Domain of unknown function (DUF1732) BKD09_RS29705 PF03755 YicC-like family, N-terminal region BKD09_RS29710 PF02618 YceG-like family BKD09_RS29715 PF02801 Beta-ketoacyl synthase, C-terminal domain BKD09_RS29715 PF00109 Beta-ketoacyl synthase, N-terminal domain BKD09_RS29720 PF00550 Phosphopantetheine attachment site BKD09_RS29730 PF00698 Acyl transferase domain BKD09_RS29745 PF01250 Ribosomal protein S6 BKD09_RS29750 PF01084 Ribosomal protein S18 BKD09_RS29760 PF01281 Ribosomal protein L9, N-terminal domain BKD09_RS29760 PF03948 Ribosomal protein L9, C-terminal domain BKD09_RS29785 PF00772 DnaB-like helicase N terminal domain BKD09_RS29785 PF03796 DnaB-like helicase C terminal domain BKD09_RS29790 PF00842 Alanine racemase, C-terminal domain BKD09_RS29790 PF01168 Alanine racemase, N-terminal domain BKD09_RS29805 PF03372 Endonuclease/Exonuclease/phosphatase family BKD09_RS29825 PF07729 FCD domain BKD09_RS29825 PF00392 Bacterial regulatory proteins, gntR family BKD09_RS29830 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BKD09_RS29830 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BKD09_RS29835 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS29840 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS29845 PF00005 ABC transporter BKD09_RS29850 PF00497 Bacterial extracellular solute-binding proteins, family 3 BKD09_RS29855 PF02502 Ribose/Galactose Isomerase BKD09_RS29865 PF00563 EAL domain BKD09_RS29865 PF00990 Diguanylate cyclase, GGDEF domain BKD09_RS29865 PF03707 Bacterial signalling protein N terminal repeat BKD09_RS29870 PF13407 Periplasmic binding protein domain BKD09_RS29875 PF06745 KaiC BKD09_RS29875 PF18073 Rubredoxin metal binding domain BKD09_RS29880 PF02674 Colicin V production protein BKD09_RS29885 PF13537 Glutamine amidotransferase domain BKD09_RS29885 PF00156 Phosphoribosyl transferase domain BKD09_RS29890 PF00106 short chain dehydrogenase BKD09_RS29905 PF07690 Major Facilitator Superfamily BKD09_RS29910 PF01926 50S ribosome-binding GTPase BKD09_RS29910 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BKD09_RS29925 PF00501 AMP-binding enzyme BKD09_RS29925 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS29940 PF03144 Elongation factor Tu domain 2 BKD09_RS29940 PF00009 Elongation factor Tu GTP binding domain BKD09_RS29940 PF16658 Class II release factor RF3, C-terminal domain BKD09_RS29945 PF00893 Small Multidrug Resistance protein BKD09_RS29950 PF01384 Phosphate transporter family BKD09_RS29955 PF01865 Protein of unknown function DUF47 BKD09_RS29965 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS29975 PF00005 ABC transporter BKD09_RS29980 PF12399 Branched-chain amino acid ATP-binding cassette transporter BKD09_RS29980 PF00005 ABC transporter BKD09_RS29990 PF03960 ArsC family BKD09_RS29995 PF09334 tRNA synthetases class I (M) BKD09_RS29995 PF01588 Putative tRNA binding domain BKD09_RS29995 PF08264 Anticodon-binding domain of tRNA BKD09_RS30000 PF08361 MAATS-type transcriptional repressor, C-terminal region BKD09_RS30000 PF00440 Bacterial regulatory proteins, tetR family BKD09_RS30010 PF00043 Glutathione S-transferase, C-terminal domain BKD09_RS30010 PF02798 Glutathione S-transferase, N-terminal domain BKD09_RS30035 PF00144 Beta-lactamase BKD09_RS30040 PF00583 Acetyltransferase (GNAT) family BKD09_RS30050 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BKD09_RS30050 PF00205 Thiamine pyrophosphate enzyme, central domain BKD09_RS30050 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BKD09_RS30055 PF03466 LysR substrate binding domain BKD09_RS30055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS30070 PF03551 Transcriptional regulator PadR-like family BKD09_RS30085 PF01047 MarR family BKD09_RS30090 PF02566 OsmC-like protein BKD09_RS30125 PF01327 Polypeptide deformylase BKD09_RS30130 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS30145 PF00884 Sulfatase BKD09_RS30155 PF00654 Voltage gated chloride channel BKD09_RS30175 PF03466 LysR substrate binding domain BKD09_RS30175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS30180 PF01022 Bacterial regulatory protein, arsR family BKD09_RS30195 PF00144 Beta-lactamase BKD09_RS30205 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase BKD09_RS30220 PF12833 Helix-turn-helix domain BKD09_RS30230 PF00561 alpha/beta hydrolase fold BKD09_RS30250 PF03466 LysR substrate binding domain BKD09_RS30250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS30275 PF00117 Glutamine amidotransferase class-I BKD09_RS30275 PF02540 NAD synthase BKD09_RS30275 PF00958 GMP synthase C terminal domain BKD09_RS30290 PF00313 'Cold-shock' DNA-binding domain BKD09_RS30295 PF01189 16S rRNA methyltransferase RsmB/F BKD09_RS30295 PF01029 NusB family BKD09_RS30320 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS30325 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS30330 PF00005 ABC transporter BKD09_RS30335 PF01464 Transglycosylase SLT domain BKD09_RS30335 PF00497 Bacterial extracellular solute-binding proteins, family 3 BKD09_RS30340 PF01042 Endoribonuclease L-PSP BKD09_RS30345 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family BKD09_RS30350 PF00356 Bacterial regulatory proteins, lacI family BKD09_RS30360 PF16884 N-terminal domain of oxidoreductase BKD09_RS30360 PF00107 Zinc-binding dehydrogenase BKD09_RS30365 PF00478 IMP dehydrogenase / GMP reductase domain BKD09_RS30365 PF00571 CBS domain BKD09_RS30370 PF07690 Major Facilitator Superfamily BKD09_RS30390 PF01728 FtsJ-like methyltransferase BKD09_RS30395 PF02541 Ppx/GppA phosphatase family BKD09_RS30400 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BKD09_RS30400 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BKD09_RS30415 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BKD09_RS30420 PF00005 ABC transporter BKD09_RS30420 PF16326 ABC transporter C-terminal domain BKD09_RS30425 PF14031 Putative serine dehydratase domain BKD09_RS30425 PF01168 Alanine racemase, N-terminal domain BKD09_RS30430 PF03466 LysR substrate binding domain BKD09_RS30430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS30435 PF07690 Major Facilitator Superfamily BKD09_RS30440 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BKD09_RS30440 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKD09_RS30440 PF13247 4Fe-4S dicluster domain BKD09_RS30445 PF00106 short chain dehydrogenase BKD09_RS30450 PF01575 MaoC like domain BKD09_RS30455 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS30455 PF00501 AMP-binding enzyme BKD09_RS30460 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BKD09_RS30460 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BKD09_RS30470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BKD09_RS30470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BKD09_RS30470 PF02770 Acyl-CoA dehydrogenase, middle domain BKD09_RS30475 PF00171 Aldehyde dehydrogenase family BKD09_RS30480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS30480 PF03466 LysR substrate binding domain BKD09_RS30495 PF00378 Enoyl-CoA hydratase/isomerase BKD09_RS30500 PF00108 Thiolase, N-terminal domain BKD09_RS30500 PF02803 Thiolase, C-terminal domain BKD09_RS30505 PF07690 Major Facilitator Superfamily BKD09_RS30520 PF06314 Acetoacetate decarboxylase (ADC) BKD09_RS30555 PF00266 Aminotransferase class-V BKD09_RS30560 PF00497 Bacterial extracellular solute-binding proteins, family 3 BKD09_RS30565 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS30570 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS30575 PF00005 ABC transporter BKD09_RS30580 PF02913 FAD linked oxidases, C-terminal domain BKD09_RS30580 PF01565 FAD binding domain BKD09_RS30585 PF01568 Molydopterin dinucleotide binding domain BKD09_RS30585 PF00384 Molybdopterin oxidoreductase BKD09_RS30585 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BKD09_RS30595 PF01039 Carboxyl transferase domain BKD09_RS30605 PF00364 Biotin-requiring enzyme BKD09_RS30620 PF04960 Glutaminase BKD09_RS30620 PF00027 Cyclic nucleotide-binding domain BKD09_RS30640 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BKD09_RS30640 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BKD09_RS30645 PF02515 CoA-transferase family III BKD09_RS30655 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BKD09_RS30655 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BKD09_RS30660 PF01081 KDPG and KHG aldolase BKD09_RS30665 PF00294 pfkB family carbohydrate kinase BKD09_RS30670 PF01370 NAD dependent epimerase/dehydratase family BKD09_RS30675 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS30680 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS30690 PF17912 MalK OB fold domain BKD09_RS30690 PF00005 ABC transporter BKD09_RS30690 PF03459 TOBE domain BKD09_RS30695 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BKD09_RS30695 PF00356 Bacterial regulatory proteins, lacI family BKD09_RS30700 PF00920 Dehydratase family BKD09_RS30715 PF00144 Beta-lactamase BKD09_RS30730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS30730 PF03466 LysR substrate binding domain BKD09_RS30735 PF02163 Peptidase family M50 BKD09_RS30750 PF02472 Biopolymer transport protein ExbD/TolR BKD09_RS30755 PF01618 MotA/TolQ/ExbB proton channel family BKD09_RS30760 PF18331 PKHD-type hydroxylase C-terminal domain BKD09_RS30760 PF13640 2OG-Fe(II) oxygenase superfamily BKD09_RS30765 PF00593 TonB dependent receptor BKD09_RS30765 PF07715 TonB-dependent Receptor Plug Domain BKD09_RS30775 PF13533 Biotin-lipoyl like BKD09_RS30780 PF00873 AcrB/AcrD/AcrF family BKD09_RS30790 PF00884 Sulfatase BKD09_RS30800 PF00005 ABC transporter BKD09_RS30805 PF00005 ABC transporter BKD09_RS30815 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS30820 PF13458 Periplasmic binding protein BKD09_RS30830 PF07237 Protein of unknown function (DUF1428) BKD09_RS30860 PF03401 Tripartite tricarboxylate transporter family receptor BKD09_RS30865 PF00465 Iron-containing alcohol dehydrogenase BKD09_RS30870 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BKD09_RS30875 PF17042 Nucleotide-binding C-terminal domain BKD09_RS30875 PF07005 Sugar-binding N-terminal domain BKD09_RS30880 PF01565 FAD binding domain BKD09_RS30880 PF02913 FAD linked oxidases, C-terminal domain BKD09_RS30885 PF00701 Dihydrodipicolinate synthetase family BKD09_RS30895 PF12706 Beta-lactamase superfamily domain BKD09_RS30905 PF01979 Amidohydrolase family BKD09_RS30910 PF07690 Major Facilitator Superfamily BKD09_RS30915 PF00561 alpha/beta hydrolase fold BKD09_RS30920 PF07729 FCD domain BKD09_RS30920 PF00392 Bacterial regulatory proteins, gntR family BKD09_RS30925 PF00171 Aldehyde dehydrogenase family BKD09_RS30930 PF00083 Sugar (and other) transporter BKD09_RS30935 PF01425 Amidase BKD09_RS30945 PF00440 Bacterial regulatory proteins, tetR family BKD09_RS30950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BKD09_RS30950 PF00529 HlyD membrane-fusion protein of T1SS BKD09_RS30955 PF00873 AcrB/AcrD/AcrF family BKD09_RS30985 PF12833 Helix-turn-helix domain BKD09_RS31020 PF08501 Shikimate dehydrogenase substrate binding domain BKD09_RS31020 PF01488 Shikimate / quinate 5-dehydrogenase BKD09_RS31020 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BKD09_RS31025 PF00743 Flavin-binding monooxygenase-like BKD09_RS31030 PF00501 AMP-binding enzyme BKD09_RS31030 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS31040 PF02530 Porin subfamily BKD09_RS31050 PF02530 Porin subfamily BKD09_RS31060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BKD09_RS31060 PF02770 Acyl-CoA dehydrogenase, middle domain BKD09_RS31060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BKD09_RS31065 PF00529 HlyD membrane-fusion protein of T1SS BKD09_RS31065 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BKD09_RS31085 PF07690 Major Facilitator Superfamily BKD09_RS31090 PF00497 Bacterial extracellular solute-binding proteins, family 3 BKD09_RS31095 PF00005 ABC transporter BKD09_RS31095 PF12399 Branched-chain amino acid ATP-binding cassette transporter BKD09_RS31100 PF00005 ABC transporter BKD09_RS31105 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS31135 PF00005 ABC transporter BKD09_RS31150 PF13382 Adenine deaminase C-terminal domain BKD09_RS31150 PF01979 Amidohydrolase family BKD09_RS31155 PF01979 Amidohydrolase family BKD09_RS31175 PF03737 Aldolase/RraA BKD09_RS31180 PF02585 GlcNAc-PI de-N-acetylase BKD09_RS31185 PF04909 Amidohydrolase BKD09_RS31195 PF03401 Tripartite tricarboxylate transporter family receptor BKD09_RS31210 PF00067 Cytochrome P450 BKD09_RS31220 PF00175 Oxidoreductase NAD-binding domain BKD09_RS31220 PF00970 Oxidoreductase FAD-binding domain BKD09_RS31225 PF01979 Amidohydrolase family BKD09_RS31240 PF12802 MarR family BKD09_RS31245 PF00005 ABC transporter BKD09_RS31250 PF12399 Branched-chain amino acid ATP-binding cassette transporter BKD09_RS31250 PF00005 ABC transporter BKD09_RS31260 PF13458 Periplasmic binding protein BKD09_RS31275 PF00037 4Fe-4S binding domain BKD09_RS31280 PF00111 2Fe-2S iron-sulfur cluster binding domain BKD09_RS31280 PF01799 [2Fe-2S] binding domain BKD09_RS31285 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BKD09_RS31285 PF00034 Cytochrome c BKD09_RS31285 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BKD09_RS31290 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BKD09_RS31315 PF02308 MgtC family BKD09_RS31345 PF00550 Phosphopantetheine attachment site BKD09_RS31350 PF07977 FabA-like domain BKD09_RS31360 PF02801 Beta-ketoacyl synthase, C-terminal domain BKD09_RS31360 PF00109 Beta-ketoacyl synthase, N-terminal domain BKD09_RS31365 PF03279 Bacterial lipid A biosynthesis acyltransferase BKD09_RS31380 PF00486 Transcriptional regulatory protein, C terminal BKD09_RS31385 PF12951 Passenger-associated-transport-repeat BKD09_RS31390 PF13416 Bacterial extracellular solute-binding protein BKD09_RS31395 PF00155 Aminotransferase class I and II BKD09_RS31405 PF02705 K+ potassium transporter BKD09_RS31410 PF02705 K+ potassium transporter BKD09_RS31415 PF13677 Membrane MotB of proton-channel complex MotA/MotB BKD09_RS31415 PF00691 OmpA family BKD09_RS31420 PF01618 MotA/TolQ/ExbB proton channel family BKD09_RS31425 PF00106 short chain dehydrogenase BKD09_RS31440 PF01066 CDP-alcohol phosphatidyltransferase BKD09_RS31445 PF02666 Phosphatidylserine decarboxylase BKD09_RS31450 PF00005 ABC transporter BKD09_RS31450 PF00664 ABC transporter transmembrane region BKD09_RS31455 PF03641 Possible lysine decarboxylase BKD09_RS31465 PF08502 LeuA allosteric (dimerisation) domain BKD09_RS31465 PF00682 HMGL-like BKD09_RS31475 PF01406 tRNA synthetases class I (C) catalytic domain BKD09_RS31495 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BKD09_RS31500 PF00115 Cytochrome C and Quinol oxidase polypeptide I BKD09_RS31510 PF00510 Cytochrome c oxidase subunit III BKD09_RS31520 PF02540 NAD synthase BKD09_RS31520 PF00795 Carbon-nitrogen hydrolase BKD09_RS31525 PF01219 Prokaryotic diacylglycerol kinase BKD09_RS31530 PF01474 Class-II DAHP synthetase family BKD09_RS31540 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS31540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS31540 PF08521 Two-component sensor kinase N-terminal BKD09_RS31545 PF00072 Response regulator receiver domain BKD09_RS31545 PF00486 Transcriptional regulatory protein, C terminal BKD09_RS31570 PF00171 Aldehyde dehydrogenase family BKD09_RS31580 PF00072 Response regulator receiver domain BKD09_RS31580 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS31590 PF03358 NADPH-dependent FMN reductase BKD09_RS31595 PF00561 alpha/beta hydrolase fold BKD09_RS31610 PF03459 TOBE domain BKD09_RS31610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS31615 PF00291 Pyridoxal-phosphate dependent enzyme BKD09_RS31625 PF00171 Aldehyde dehydrogenase family BKD09_RS31640 PF03350 Uncharacterized protein family, UPF0114 BKD09_RS31645 PF03741 Integral membrane protein TerC family BKD09_RS31665 PF00175 Oxidoreductase NAD-binding domain BKD09_RS31665 PF00042 Globin BKD09_RS31665 PF00970 Oxidoreductase FAD-binding domain BKD09_RS31675 PF00392 Bacterial regulatory proteins, gntR family BKD09_RS31675 PF00155 Aminotransferase class I and II BKD09_RS31695 PF13230 Glutamine amidotransferases class-II BKD09_RS31700 PF04107 Glutamate-cysteine ligase family 2(GCS2) BKD09_RS31740 PF00561 alpha/beta hydrolase fold BKD09_RS31745 PF05067 Manganese containing catalase BKD09_RS31750 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKD09_RS31750 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BKD09_RS31760 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BKD09_RS31765 PF13419 Haloacid dehalogenase-like hydrolase BKD09_RS31775 PF06463 Molybdenum Cofactor Synthesis C BKD09_RS31775 PF04055 Radical SAM superfamily BKD09_RS31780 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BKD09_RS31785 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BKD09_RS31790 PF07687 Peptidase dimerisation domain BKD09_RS31790 PF01546 Peptidase family M20/M25/M40 BKD09_RS31795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS31795 PF00672 HAMP domain BKD09_RS31795 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS31800 PF00072 Response regulator receiver domain BKD09_RS31800 PF00486 Transcriptional regulatory protein, C terminal BKD09_RS31810 PF00672 HAMP domain BKD09_RS31810 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS31810 PF02743 Cache domain BKD09_RS31830 PF03480 Bacterial extracellular solute-binding protein, family 7 BKD09_RS31835 PF10609 NUBPL iron-transfer P-loop NTPase BKD09_RS31845 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BKD09_RS31845 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BKD09_RS31850 PF03600 Citrate transporter BKD09_RS31855 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS31855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS31855 PF00989 PAS fold BKD09_RS31875 PF01207 Dihydrouridine synthase (Dus) BKD09_RS31880 PF01544 CorA-like Mg2+ transporter protein BKD09_RS31900 PF02321 Outer membrane efflux protein BKD09_RS31905 PF00873 AcrB/AcrD/AcrF family BKD09_RS31915 PF13505 Outer membrane protein beta-barrel domain BKD09_RS31930 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS31930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS31930 PF13493 Domain of unknown function (DUF4118) BKD09_RS31930 PF02702 Osmosensitive K+ channel His kinase sensor domain BKD09_RS31935 PF00486 Transcriptional regulatory protein, C terminal BKD09_RS31935 PF00072 Response regulator receiver domain BKD09_RS31965 PF02910 Fumarate reductase flavoprotein C-term BKD09_RS31965 PF00890 FAD binding domain BKD09_RS31970 PF03180 NLPA lipoprotein BKD09_RS31980 PF03180 NLPA lipoprotein BKD09_RS31985 PF01053 Cys/Met metabolism PLP-dependent enzyme BKD09_RS31990 PF00296 Luciferase-like monooxygenase BKD09_RS31995 PF03466 LysR substrate binding domain BKD09_RS31995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS32000 PF07690 Major Facilitator Superfamily BKD09_RS32005 PF09084 NMT1/THI5 like BKD09_RS32010 PF00005 ABC transporter BKD09_RS32010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKD09_RS32015 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS32015 PF12911 N-terminal TM domain of oligopeptide transport permease C BKD09_RS32020 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS32025 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKD09_RS32030 PF00296 Luciferase-like monooxygenase BKD09_RS32035 PF00296 Luciferase-like monooxygenase BKD09_RS32040 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS32045 PF00005 ABC transporter BKD09_RS32055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BKD09_RS32055 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BKD09_RS32060 PF01613 Flavin reductase like domain BKD09_RS32060 PF00258 Flavodoxin BKD09_RS32065 PF00132 Bacterial transferase hexapeptide (six repeats) BKD09_RS32070 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS32075 PF00005 ABC transporter BKD09_RS32085 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BKD09_RS32090 PF13454 FAD-NAD(P)-binding BKD09_RS32095 PF01209 ubiE/COQ5 methyltransferase family BKD09_RS32100 PF00296 Luciferase-like monooxygenase BKD09_RS32105 PF03180 NLPA lipoprotein BKD09_RS32115 PF01037 Lrp/AsnC ligand binding domain BKD09_RS32115 PF13404 AsnC-type helix-turn-helix domain BKD09_RS32125 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKD09_RS32130 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS32135 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS32135 PF12911 N-terminal TM domain of oligopeptide transport permease C BKD09_RS32140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKD09_RS32140 PF00005 ABC transporter BKD09_RS32155 PF03466 LysR substrate binding domain BKD09_RS32155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS32165 PF00596 Class II Aldolase and Adducin N-terminal domain BKD09_RS32170 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BKD09_RS32170 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BKD09_RS32180 PF00732 GMC oxidoreductase BKD09_RS32180 PF05199 GMC oxidoreductase BKD09_RS32185 PF07690 Major Facilitator Superfamily BKD09_RS32190 PF00378 Enoyl-CoA hydratase/isomerase BKD09_RS32195 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS32195 PF00501 AMP-binding enzyme BKD09_RS32200 PF01799 [2Fe-2S] binding domain BKD09_RS32200 PF00111 2Fe-2S iron-sulfur cluster binding domain BKD09_RS32205 PF00941 FAD binding domain in molybdopterin dehydrogenase BKD09_RS32205 PF03450 CO dehydrogenase flavoprotein C-terminal domain BKD09_RS32210 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BKD09_RS32210 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BKD09_RS32215 PF02311 AraC-like ligand binding domain BKD09_RS32215 PF12833 Helix-turn-helix domain BKD09_RS32220 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase BKD09_RS32225 PF02441 Flavoprotein BKD09_RS32230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS32230 PF03466 LysR substrate binding domain BKD09_RS32235 PF03401 Tripartite tricarboxylate transporter family receptor BKD09_RS32240 PF05899 Protein of unknown function (DUF861) BKD09_RS32240 PF07883 Cupin domain BKD09_RS32245 PF04115 Ureidoglycolate lyase BKD09_RS32250 PF00375 Sodium:dicarboxylate symporter family BKD09_RS32255 PF03466 LysR substrate binding domain BKD09_RS32255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS32260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS32260 PF03466 LysR substrate binding domain BKD09_RS32275 PF01042 Endoribonuclease L-PSP BKD09_RS32280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BKD09_RS32280 PF02770 Acyl-CoA dehydrogenase, middle domain BKD09_RS32280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BKD09_RS32285 PF01494 FAD binding domain BKD09_RS32295 PF00550 Phosphopantetheine attachment site BKD09_RS32295 PF00551 Formyl transferase BKD09_RS32295 PF00668 Condensation domain BKD09_RS32295 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS32295 PF00501 AMP-binding enzyme BKD09_RS32300 PF13458 Periplasmic binding protein BKD09_RS32305 PF04199 Putative cyclase BKD09_RS32320 PF02566 OsmC-like protein BKD09_RS32340 PF12399 Branched-chain amino acid ATP-binding cassette transporter BKD09_RS32340 PF00005 ABC transporter BKD09_RS32345 PF00005 ABC transporter BKD09_RS32350 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS32350 PF13191 AAA ATPase domain BKD09_RS32380 PF00190 Cupin BKD09_RS32385 PF00893 Small Multidrug Resistance protein BKD09_RS32390 PF02627 Carboxymuconolactone decarboxylase family BKD09_RS32395 PF00392 Bacterial regulatory proteins, gntR family BKD09_RS32395 PF00155 Aminotransferase class I and II BKD09_RS32400 PF02525 Flavodoxin-like fold BKD09_RS32405 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS32410 PF00561 alpha/beta hydrolase fold BKD09_RS32465 PF02798 Glutathione S-transferase, N-terminal domain BKD09_RS32480 PF07311 Dodecin BKD09_RS32500 PF01557 Fumarylacetoacetate (FAA) hydrolase family BKD09_RS32505 PF07883 Cupin domain BKD09_RS32510 PF00795 Carbon-nitrogen hydrolase BKD09_RS32540 PF00501 AMP-binding enzyme BKD09_RS32540 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS32550 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BKD09_RS32550 PF00355 Rieske [2Fe-2S] domain BKD09_RS32555 PF00970 Oxidoreductase FAD-binding domain BKD09_RS32555 PF00111 2Fe-2S iron-sulfur cluster binding domain BKD09_RS32565 PF12833 Helix-turn-helix domain BKD09_RS32580 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKD09_RS32585 PF06314 Acetoacetate decarboxylase (ADC) BKD09_RS32595 PF13533 Biotin-lipoyl like BKD09_RS32600 PF07690 Major Facilitator Superfamily BKD09_RS32615 PF02567 Phenazine biosynthesis-like protein BKD09_RS32625 PF12833 Helix-turn-helix domain BKD09_RS32630 PF08447 PAS fold BKD09_RS32630 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS32630 PF00989 PAS fold BKD09_RS32630 PF13426 PAS domain BKD09_RS32630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS32630 PF13493 Domain of unknown function (DUF4118) BKD09_RS32635 PF00072 Response regulator receiver domain BKD09_RS32635 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS32645 PF04632 Fusaric acid resistance protein family BKD09_RS32655 PF00529 HlyD membrane-fusion protein of T1SS BKD09_RS32655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BKD09_RS32660 PF02805 Metal binding domain of Ada BKD09_RS32660 PF12833 Helix-turn-helix domain BKD09_RS32665 PF00698 Acyl transferase domain BKD09_RS32675 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase BKD09_RS32680 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG BKD09_RS32690 PF01039 Carboxyl transferase domain BKD09_RS32695 PF06857 Malonate decarboxylase delta subunit (MdcD) BKD09_RS32700 PF16957 Malonate decarboxylase, alpha subunit, transporter BKD09_RS32725 PF13533 Biotin-lipoyl like BKD09_RS32730 PF00873 AcrB/AcrD/AcrF family BKD09_RS32740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS32740 PF13493 Domain of unknown function (DUF4118) BKD09_RS32740 PF00989 PAS fold BKD09_RS32740 PF08447 PAS fold BKD09_RS32740 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS32740 PF13426 PAS domain BKD09_RS32745 PF00384 Molybdopterin oxidoreductase BKD09_RS32750 PF00190 Cupin BKD09_RS32755 PF02322 Cytochrome bd terminal oxidase subunit II BKD09_RS32760 PF01654 Cytochrome bd terminal oxidase subunit I BKD09_RS32765 PF06039 Malate:quinone oxidoreductase (Mqo) BKD09_RS32780 PF00206 Lyase BKD09_RS32780 PF10415 Fumarase C C-terminus BKD09_RS32790 PF02634 FdhD/NarQ family BKD09_RS32810 PF01292 Prokaryotic cytochrome b561 BKD09_RS32825 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS32830 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS32855 PF12833 Helix-turn-helix domain BKD09_RS32860 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS32865 PF13458 Periplasmic binding protein BKD09_RS32875 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BKD09_RS32880 PF00873 AcrB/AcrD/AcrF family BKD09_RS32885 PF04545 Sigma-70, region 4 BKD09_RS32885 PF04542 Sigma-70 region 2 BKD09_RS32885 PF00140 Sigma-70 factor, region 1.2 BKD09_RS32890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS32890 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS32895 PF00486 Transcriptional regulatory protein, C terminal BKD09_RS32895 PF00072 Response regulator receiver domain BKD09_RS32915 PF01380 SIS domain BKD09_RS32920 PF00248 Aldo/keto reductase family BKD09_RS32925 PF01370 NAD dependent epimerase/dehydratase family BKD09_RS32935 PF00072 Response regulator receiver domain BKD09_RS32935 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS32940 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS32940 PF00072 Response regulator receiver domain BKD09_RS32950 PF00535 Glycosyl transferase family 2 BKD09_RS32955 PF05050 Methyltransferase FkbM domain BKD09_RS32970 PF02540 NAD synthase BKD09_RS32975 PF00733 Asparagine synthase BKD09_RS32975 PF13537 Glutamine amidotransferase domain BKD09_RS32980 PF00501 AMP-binding enzyme BKD09_RS32980 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS32990 PF00483 Nucleotidyl transferase BKD09_RS32995 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BKD09_RS33000 PF02397 Bacterial sugar transferase BKD09_RS33005 PF01370 NAD dependent epimerase/dehydratase family BKD09_RS33010 PF02563 Polysaccharide biosynthesis/export protein BKD09_RS33020 PF00534 Glycosyl transferases group 1 BKD09_RS33020 PF13439 Glycosyltransferase Family 4 BKD09_RS33030 PF00733 Asparagine synthase BKD09_RS33030 PF13537 Glutamine amidotransferase domain BKD09_RS33040 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS33040 PF00668 Condensation domain BKD09_RS33040 PF00550 Phosphopantetheine attachment site BKD09_RS33040 PF00501 AMP-binding enzyme BKD09_RS33055 PF16868 NMT1-like family BKD09_RS33065 PF05175 Methyltransferase small domain BKD09_RS33065 PF17827 PrmC N-terminal domain BKD09_RS33070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BKD09_RS33070 PF00529 HlyD membrane-fusion protein of T1SS BKD09_RS33080 PF00664 ABC transporter transmembrane region BKD09_RS33080 PF00005 ABC transporter BKD09_RS33090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS33090 PF00072 Response regulator receiver domain BKD09_RS33090 PF13188 PAS domain BKD09_RS33090 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS33090 PF08448 PAS fold BKD09_RS33105 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS33115 PF12399 Branched-chain amino acid ATP-binding cassette transporter BKD09_RS33115 PF00005 ABC transporter BKD09_RS33125 PF09370 Phosphoenolpyruvate hydrolase-like BKD09_RS33130 PF01145 SPFH domain / Band 7 family BKD09_RS33130 PF15975 Flotillin BKD09_RS33130 PF01145 SPFH domain / Band 7 family BKD09_RS33130 PF15975 Flotillin BKD09_RS33150 PF01799 [2Fe-2S] binding domain BKD09_RS33150 PF00111 2Fe-2S iron-sulfur cluster binding domain BKD09_RS33155 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BKD09_RS33155 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BKD09_RS33160 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BKD09_RS33175 PF04909 Amidohydrolase BKD09_RS33185 PF08450 SMP-30/Gluconolactonase/LRE-like region BKD09_RS33190 PF02525 Flavodoxin-like fold BKD09_RS33195 PF00356 Bacterial regulatory proteins, lacI family BKD09_RS33205 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BKD09_RS33210 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS33215 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS33235 PF00561 alpha/beta hydrolase fold BKD09_RS33240 PF08267 Cobalamin-independent synthase, N-terminal domain BKD09_RS33240 PF01717 Cobalamin-independent synthase, Catalytic domain BKD09_RS33245 PF01557 Fumarylacetoacetate (FAA) hydrolase family BKD09_RS33250 PF01522 Polysaccharide deacetylase BKD09_RS33255 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS33260 PF00005 ABC transporter BKD09_RS33275 PF00392 Bacterial regulatory proteins, gntR family BKD09_RS33275 PF07729 FCD domain BKD09_RS33280 PF00753 Metallo-beta-lactamase superfamily BKD09_RS33285 PF02627 Carboxymuconolactone decarboxylase family BKD09_RS33295 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BKD09_RS33295 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BKD09_RS33305 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS33310 PF00005 ABC transporter BKD09_RS33310 PF12399 Branched-chain amino acid ATP-binding cassette transporter BKD09_RS33315 PF00005 ABC transporter BKD09_RS33325 PF13458 Periplasmic binding protein BKD09_RS33340 PF00106 short chain dehydrogenase BKD09_RS33345 PF07729 FCD domain BKD09_RS33345 PF00392 Bacterial regulatory proteins, gntR family BKD09_RS33350 PF03401 Tripartite tricarboxylate transporter family receptor BKD09_RS33355 PF17757 UvrB interaction domain BKD09_RS33355 PF03461 TRCF domain BKD09_RS33355 PF00270 DEAD/DEAH box helicase BKD09_RS33355 PF00271 Helicase conserved C-terminal domain BKD09_RS33355 PF02559 CarD-like/TRCF domain BKD09_RS33370 PF00356 Bacterial regulatory proteins, lacI family BKD09_RS33375 PF03480 Bacterial extracellular solute-binding protein, family 7 BKD09_RS33380 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BKD09_RS33390 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain BKD09_RS33390 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain BKD09_RS33395 PF17042 Nucleotide-binding C-terminal domain BKD09_RS33395 PF07005 Sugar-binding N-terminal domain BKD09_RS33400 PF00150 Cellulase (glycosyl hydrolase family 5) BKD09_RS33400 PF00404 Dockerin type I domain BKD09_RS33400 PF03425 Carbohydrate binding domain (family 11) BKD09_RS33415 PF01134 Glucose inhibited division protein A BKD09_RS33415 PF13932 GidA associated domain BKD09_RS33435 PF13407 Periplasmic binding protein domain BKD09_RS33440 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS33445 PF00005 ABC transporter BKD09_RS33450 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BKD09_RS33450 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BKD09_RS33455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS33455 PF03466 LysR substrate binding domain BKD09_RS33465 PF00465 Iron-containing alcohol dehydrogenase BKD09_RS33470 PF01979 Amidohydrolase family BKD09_RS33480 PF00775 Dioxygenase BKD09_RS33480 PF04444 Catechol dioxygenase N terminus BKD09_RS33485 PF01565 FAD binding domain BKD09_RS33485 PF02913 FAD linked oxidases, C-terminal domain BKD09_RS33490 PF00005 ABC transporter BKD09_RS33495 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS33500 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS33505 PF13407 Periplasmic binding protein domain BKD09_RS33515 PF00005 ABC transporter BKD09_RS33515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKD09_RS33520 PF00005 ABC transporter BKD09_RS33520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKD09_RS33525 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS33530 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS33535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKD09_RS33540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKD09_RS33540 PF00005 ABC transporter BKD09_RS33545 PF12911 N-terminal TM domain of oligopeptide transport permease C BKD09_RS33545 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS33550 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS33555 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKD09_RS33560 PF13454 FAD-NAD(P)-binding BKD09_RS33570 PF16363 GDP-mannose 4,6 dehydratase BKD09_RS33575 PF01979 Amidohydrolase family BKD09_RS33580 PF01177 Asp/Glu/Hydantoin racemase BKD09_RS33585 PF01613 Flavin reductase like domain BKD09_RS33590 PF00795 Carbon-nitrogen hydrolase BKD09_RS33595 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS33595 PF00501 AMP-binding enzyme BKD09_RS33600 PF00202 Aminotransferase class-III BKD09_RS33610 PF01968 Hydantoinase/oxoprolinase BKD09_RS33610 PF05378 Hydantoinase/oxoprolinase N-terminal region BKD09_RS33615 PF00392 Bacterial regulatory proteins, gntR family BKD09_RS33615 PF00155 Aminotransferase class I and II BKD09_RS33620 PF00171 Aldehyde dehydrogenase family BKD09_RS33625 PF00449 Urease alpha-subunit, N-terminal domain BKD09_RS33625 PF01979 Amidohydrolase family BKD09_RS33640 PF00593 TonB dependent receptor BKD09_RS33640 PF07715 TonB-dependent Receptor Plug Domain BKD09_RS33645 PF00300 Histidine phosphatase superfamily (branch 1) BKD09_RS33645 PF13456 Reverse transcriptase-like BKD09_RS33650 PF02277 Phosphoribosyltransferase BKD09_RS33655 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BKD09_RS33665 PF14824 Sirohaem biosynthesis protein central BKD09_RS33665 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BKD09_RS33665 PF10414 Sirohaem synthase dimerisation region BKD09_RS33670 PF07685 CobB/CobQ-like glutamine amidotransferase domain BKD09_RS33670 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BKD09_RS33675 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BKD09_RS33685 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BKD09_RS33690 PF02571 Precorrin-6x reductase CbiJ/CobK BKD09_RS33695 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BKD09_RS33700 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BKD09_RS33705 PF02570 Precorrin-8X methylmutase BKD09_RS33710 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BKD09_RS33715 PF02514 CobN/Magnesium Chelatase BKD09_RS33720 PF07683 Cobalamin synthesis protein cobW C-terminal domain BKD09_RS33720 PF02492 CobW/HypB/UreG, nucleotide-binding domain BKD09_RS33730 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP BKD09_RS33735 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BKD09_RS33735 PF07685 CobB/CobQ-like glutamine amidotransferase domain BKD09_RS33740 PF00155 Aminotransferase class I and II BKD09_RS33745 PF03186 CobD/Cbib protein BKD09_RS33750 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase BKD09_RS33755 PF02654 Cobalamin-5-phosphate synthase BKD09_RS33760 PF00881 Nitroreductase family BKD09_RS33785 PF01627 Hpt domain BKD09_RS33785 PF00072 Response regulator receiver domain BKD09_RS33785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS33785 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS33785 PF17149 Periplasmic sensor domain found in signal transduction proteins BKD09_RS33785 PF00672 HAMP domain BKD09_RS33795 PF03466 LysR substrate binding domain BKD09_RS33795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS33800 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BKD09_RS33805 PF01738 Dienelactone hydrolase family BKD09_RS33810 PF03033 Glycosyltransferase family 28 N-terminal domain BKD09_RS33820 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS33840 PF03466 LysR substrate binding domain BKD09_RS33840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS33845 PF01425 Amidase BKD09_RS33850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKD09_RS33855 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKD09_RS33855 PF00005 ABC transporter BKD09_RS33860 PF00005 ABC transporter BKD09_RS33860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKD09_RS33865 PF12911 N-terminal TM domain of oligopeptide transport permease C BKD09_RS33865 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS33870 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS33875 PF01425 Amidase BKD09_RS33880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS33880 PF03466 LysR substrate binding domain BKD09_RS33885 PF00294 pfkB family carbohydrate kinase BKD09_RS33890 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BKD09_RS33890 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BKD09_RS33900 PF08402 TOBE domain BKD09_RS33900 PF00005 ABC transporter BKD09_RS33905 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS33910 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS33920 PF04198 Putative sugar-binding domain BKD09_RS33920 PF00325 Bacterial regulatory proteins, crp family BKD09_RS33925 PF13419 Haloacid dehalogenase-like hydrolase BKD09_RS33930 PF00092 von Willebrand factor type A domain BKD09_RS33935 PF08406 CbbQ/NirQ/NorQ C-terminal BKD09_RS33935 PF07728 AAA domain (dynein-related subfamily) BKD09_RS33940 PF00115 Cytochrome C and Quinol oxidase polypeptide I BKD09_RS33945 PF00034 Cytochrome c BKD09_RS33955 PF00510 Cytochrome c oxidase subunit III BKD09_RS33960 PF00497 Bacterial extracellular solute-binding proteins, family 3 BKD09_RS33960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS33960 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS33970 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS33975 PF00005 ABC transporter BKD09_RS33980 PF13407 Periplasmic binding protein domain BKD09_RS33985 PF08450 SMP-30/Gluconolactonase/LRE-like region BKD09_RS33990 PF01263 Aldose 1-epimerase BKD09_RS33995 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BKD09_RS34005 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS34010 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS34015 PF00005 ABC transporter BKD09_RS34020 PF13407 Periplasmic binding protein domain BKD09_RS34040 PF00890 FAD binding domain BKD09_RS34040 PF02910 Fumarate reductase flavoprotein C-term BKD09_RS34045 PF00970 Oxidoreductase FAD-binding domain BKD09_RS34045 PF00175 Oxidoreductase NAD-binding domain BKD09_RS34055 PF13545 Crp-like helix-turn-helix domain BKD09_RS34055 PF00027 Cyclic nucleotide-binding domain BKD09_RS34060 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BKD09_RS34065 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS34070 PF00005 ABC transporter BKD09_RS34075 PF03601 Conserved hypothetical protein 698 BKD09_RS34085 PF00005 ABC transporter BKD09_RS34090 PF00005 ABC transporter BKD09_RS34090 PF12399 Branched-chain amino acid ATP-binding cassette transporter BKD09_RS34100 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS34110 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS34110 PF00501 AMP-binding enzyme BKD09_RS34115 PF08359 YsiA-like protein, C-terminal region BKD09_RS34115 PF00440 Bacterial regulatory proteins, tetR family BKD09_RS34120 PF00890 FAD binding domain BKD09_RS34120 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) BKD09_RS34130 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BKD09_RS34130 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BKD09_RS34135 PF01037 Lrp/AsnC ligand binding domain BKD09_RS34140 PF01799 [2Fe-2S] binding domain BKD09_RS34140 PF10518 TAT (twin-arginine translocation) pathway signal sequence BKD09_RS34140 PF00111 2Fe-2S iron-sulfur cluster binding domain BKD09_RS34145 PF00941 FAD binding domain in molybdopterin dehydrogenase BKD09_RS34145 PF03450 CO dehydrogenase flavoprotein C-terminal domain BKD09_RS34150 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BKD09_RS34150 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BKD09_RS34155 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain BKD09_RS34155 PF01276 Orn/Lys/Arg decarboxylase, major domain BKD09_RS34155 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BKD09_RS34160 PF00583 Acetyltransferase (GNAT) family BKD09_RS34175 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BKD09_RS34175 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BKD09_RS34185 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BKD09_RS34185 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BKD09_RS34200 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BKD09_RS34200 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BKD09_RS34205 PF01261 Xylose isomerase-like TIM barrel BKD09_RS34210 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BKD09_RS34210 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BKD09_RS34210 PF00205 Thiamine pyrophosphate enzyme, central domain BKD09_RS34215 PF01979 Amidohydrolase family BKD09_RS34215 PF13382 Adenine deaminase C-terminal domain BKD09_RS34225 PF01970 Tripartite tricarboxylate transporter TctA family BKD09_RS34235 PF03401 Tripartite tricarboxylate transporter family receptor BKD09_RS34240 PF01614 Bacterial transcriptional regulator BKD09_RS34240 PF09339 IclR helix-turn-helix domain BKD09_RS34245 PF13607 Succinyl-CoA ligase like flavodoxin domain BKD09_RS34245 PF13380 CoA binding domain BKD09_RS34250 PF00392 Bacterial regulatory proteins, gntR family BKD09_RS34250 PF07729 FCD domain BKD09_RS34255 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BKD09_RS34255 PF00205 Thiamine pyrophosphate enzyme, central domain BKD09_RS34255 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BKD09_RS34260 PF02515 CoA-transferase family III BKD09_RS34265 PF06968 Biotin and Thiamin Synthesis associated domain BKD09_RS34265 PF04055 Radical SAM superfamily BKD09_RS34285 PF00313 'Cold-shock' DNA-binding domain BKD09_RS34295 PF13443 Cro/C1-type HTH DNA-binding domain BKD09_RS34315 PF00012 Hsp70 protein BKD09_RS34320 PF07690 Major Facilitator Superfamily BKD09_RS34325 PF07690 Major Facilitator Superfamily BKD09_RS34335 PF08546 Ketopantoate reductase PanE/ApbA C terminal BKD09_RS34335 PF02558 Ketopantoate reductase PanE/ApbA BKD09_RS34340 PF01557 Fumarylacetoacetate (FAA) hydrolase family BKD09_RS34365 PF03060 Nitronate monooxygenase BKD09_RS34370 PF08240 Alcohol dehydrogenase GroES-like domain BKD09_RS34370 PF14765 Polyketide synthase dehydratase BKD09_RS34370 PF00550 Phosphopantetheine attachment site BKD09_RS34370 PF02801 Beta-ketoacyl synthase, C-terminal domain BKD09_RS34370 PF00109 Beta-ketoacyl synthase, N-terminal domain BKD09_RS34370 PF08659 KR domain BKD09_RS34370 PF00698 Acyl transferase domain BKD09_RS34370 PF16197 Ketoacyl-synthetase C-terminal extension BKD09_RS34375 PF01545 Cation efflux family BKD09_RS34375 PF16916 Dimerisation domain of Zinc Transporter BKD09_RS34380 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS34380 PF00989 PAS fold BKD09_RS34380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS34385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS34385 PF03466 LysR substrate binding domain BKD09_RS34395 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BKD09_RS34395 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BKD09_RS34395 PF00037 4Fe-4S binding domain BKD09_RS34400 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BKD09_RS34400 PF01568 Molydopterin dinucleotide binding domain BKD09_RS34400 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BKD09_RS34400 PF00384 Molybdopterin oxidoreductase BKD09_RS34400 PF12838 4Fe-4S dicluster domain BKD09_RS34405 PF02634 FdhD/NarQ family BKD09_RS34415 PF03710 Glutamate-ammonia ligase adenylyltransferase BKD09_RS34415 PF08335 GlnD PII-uridylyltransferase BKD09_RS34420 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS34420 PF00672 HAMP domain BKD09_RS34420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS34425 PF13807 G-rich domain on putative tyrosine kinase BKD09_RS34425 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BKD09_RS34425 PF02706 Chain length determinant protein BKD09_RS34430 PF16363 GDP-mannose 4,6 dehydratase BKD09_RS34435 PF01370 NAD dependent epimerase/dehydratase family BKD09_RS34445 PF02397 Bacterial sugar transferase BKD09_RS34450 PF00639 PPIC-type PPIASE domain BKD09_RS34450 PF09312 SurA N-terminal domain BKD09_RS34470 PF02472 Biopolymer transport protein ExbD/TolR BKD09_RS34475 PF01618 MotA/TolQ/ExbB proton channel family BKD09_RS34480 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB BKD09_RS34480 PF08479 POTRA domain, ShlB-type BKD09_RS34480 PF17287 POTRA domain BKD09_RS34535 PF09312 SurA N-terminal domain BKD09_RS34535 PF00639 PPIC-type PPIASE domain BKD09_RS34540 PF00535 Glycosyl transferase family 2 BKD09_RS34545 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) BKD09_RS34545 PF12708 Pectate lyase superfamily protein BKD09_RS34545 PF08548 Peptidase M10 serralysin C terminal BKD09_RS34550 PF16861 Carbamoyltransferase C-terminus BKD09_RS34550 PF02543 Carbamoyltransferase N-terminus BKD09_RS34555 PF03062 MBOAT, membrane-bound O-acyltransferase family BKD09_RS34565 PF00733 Asparagine synthase BKD09_RS34565 PF13537 Glutamine amidotransferase domain BKD09_RS34575 PF13579 Glycosyl transferase 4-like domain BKD09_RS34575 PF00534 Glycosyl transferases group 1 BKD09_RS34625 PF07963 Prokaryotic N-terminal methylation motif BKD09_RS34625 PF00114 Pilin (bacterial filament) BKD09_RS34630 PF08334 Type II secretion system (T2SS), protein G BKD09_RS34630 PF07963 Prokaryotic N-terminal methylation motif BKD09_RS34635 PF00482 Type II secretion system (T2SS), protein F BKD09_RS34640 PF00437 Type II/IV secretion system protein BKD09_RS34640 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BKD09_RS34650 PF03958 Bacterial type II/III secretion system short domain BKD09_RS34650 PF00263 Bacterial type II and III secretion system protein BKD09_RS34675 PF00005 ABC transporter BKD09_RS34675 PF03412 Peptidase C39 family BKD09_RS34675 PF00664 ABC transporter transmembrane region BKD09_RS34685 PF00884 Sulfatase BKD09_RS34695 PF00072 Response regulator receiver domain BKD09_RS34695 PF00486 Transcriptional regulatory protein, C terminal BKD09_RS34700 PF13180 PDZ domain BKD09_RS34705 PF08269 Cache domain BKD09_RS34705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BKD09_RS34710 PF03918 Cytochrome C biogenesis protein BKD09_RS34715 PF01578 Cytochrome C assembly protein BKD09_RS34715 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BKD09_RS34720 PF03100 CcmE BKD09_RS34740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS34745 PF00486 Transcriptional regulatory protein, C terminal BKD09_RS34745 PF00072 Response regulator receiver domain BKD09_RS34755 PF02735 Ku70/Ku80 beta-barrel domain BKD09_RS34780 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BKD09_RS34780 PF00205 Thiamine pyrophosphate enzyme, central domain BKD09_RS34780 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BKD09_RS34785 PF08448 PAS fold BKD09_RS34785 PF08447 PAS fold BKD09_RS34785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS34795 PF07690 Major Facilitator Superfamily BKD09_RS34800 PF03692 Putative zinc- or iron-chelating domain BKD09_RS34805 PF00912 Transglycosylase BKD09_RS34805 PF00905 Penicillin binding protein transpeptidase domain BKD09_RS34805 PF17092 Penicillin-binding protein OB-like domain BKD09_RS34825 PF03466 LysR substrate binding domain BKD09_RS34825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS34835 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BKD09_RS34880 PF00230 Major intrinsic protein BKD09_RS34885 PF03960 ArsC family BKD09_RS34890 PF00873 AcrB/AcrD/AcrF family BKD09_RS34910 PF00593 TonB dependent receptor BKD09_RS34910 PF07715 TonB-dependent Receptor Plug Domain BKD09_RS34925 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BKD09_RS34930 PF03480 Bacterial extracellular solute-binding protein, family 7 BKD09_RS34935 PF02780 Transketolase, C-terminal domain BKD09_RS34935 PF02779 Transketolase, pyrimidine binding domain BKD09_RS34940 PF00456 Transketolase, thiamine diphosphate binding domain BKD09_RS34950 PF03466 LysR substrate binding domain BKD09_RS34950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS34955 PF00753 Metallo-beta-lactamase superfamily BKD09_RS34960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS34990 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS34990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS35000 PF02657 Fe-S metabolism associated domain BKD09_RS35005 PF05443 ROS/MUCR transcriptional regulator protein BKD09_RS35020 PF00596 Class II Aldolase and Adducin N-terminal domain BKD09_RS35035 PF05872 Bacterial protein of unknown function (DUF853) BKD09_RS35050 PF00809 Pterin binding enzyme BKD09_RS35055 PF02152 Dihydroneopterin aldolase BKD09_RS35060 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BKD09_RS35065 PF01642 Methylmalonyl-CoA mutase BKD09_RS35075 PF01642 Methylmalonyl-CoA mutase BKD09_RS35075 PF02310 B12 binding domain BKD09_RS35100 PF01970 Tripartite tricarboxylate transporter TctA family BKD09_RS35125 PF00082 Subtilase family BKD09_RS35140 PF00990 Diguanylate cyclase, GGDEF domain BKD09_RS35140 PF00072 Response regulator receiver domain BKD09_RS35155 PF04542 Sigma-70 region 2 BKD09_RS35155 PF04545 Sigma-70, region 4 BKD09_RS35165 PF00378 Enoyl-CoA hydratase/isomerase BKD09_RS35170 PF02321 Outer membrane efflux protein BKD09_RS35180 PF04909 Amidohydrolase BKD09_RS35185 PF00873 AcrB/AcrD/AcrF family BKD09_RS35195 PF02515 CoA-transferase family III BKD09_RS35215 PF07733 Bacterial DNA polymerase III alpha NTPase domain BKD09_RS35215 PF01336 OB-fold nucleic acid binding domain BKD09_RS35215 PF02811 PHP domain BKD09_RS35215 PF14579 Helix-hairpin-helix motif BKD09_RS35215 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BKD09_RS35235 PF03167 Uracil DNA glycosylase superfamily BKD09_RS35240 PF01384 Phosphate transporter family BKD09_RS35245 PF01546 Peptidase family M20/M25/M40 BKD09_RS35245 PF07687 Peptidase dimerisation domain BKD09_RS35250 PF00732 GMC oxidoreductase BKD09_RS35250 PF05199 GMC oxidoreductase BKD09_RS35265 PF00127 Copper binding proteins, plastocyanin/azurin family BKD09_RS35270 PF04542 Sigma-70 region 2 BKD09_RS35270 PF08281 Sigma-70, region 4 BKD09_RS35280 PF00202 Aminotransferase class-III BKD09_RS35295 PF02401 LytB protein BKD09_RS35300 PF04055 Radical SAM superfamily BKD09_RS35310 PF01048 Phosphorylase superfamily BKD09_RS35315 PF13243 Squalene-hopene cyclase C-terminal domain BKD09_RS35315 PF13249 Squalene-hopene cyclase N-terminal domain BKD09_RS35320 PF01593 Flavin containing amine oxidoreductase BKD09_RS35355 PF05985 Ethanolamine ammonia-lyase light chain (EutC) BKD09_RS35360 PF04055 Radical SAM superfamily BKD09_RS35360 PF13282 Domain of unknown function (DUF4070) BKD09_RS35360 PF02310 B12 binding domain BKD09_RS35365 PF06751 Ethanolamine ammonia lyase large subunit (EutB) BKD09_RS35370 PF13426 PAS domain BKD09_RS35370 PF08447 PAS fold BKD09_RS35370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BKD09_RS35390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BKD09_RS35390 PF02770 Acyl-CoA dehydrogenase, middle domain BKD09_RS35390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BKD09_RS35410 PF14759 Reductase C-terminal BKD09_RS35410 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKD09_RS35415 PF01227 GTP cyclohydrolase I BKD09_RS35435 PF14403 Circularly permuted ATP-grasp type 2 BKD09_RS35435 PF04168 A predicted alpha-helical domain with a conserved ER motif. BKD09_RS35450 PF08666 SAF domain BKD09_RS35450 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus BKD09_RS35455 PF03328 HpcH/HpaI aldolase/citrate lyase family BKD09_RS35460 PF02615 Malate/L-lactate dehydrogenase BKD09_RS35465 PF00005 ABC transporter BKD09_RS35470 PF00005 ABC transporter BKD09_RS35470 PF12399 Branched-chain amino acid ATP-binding cassette transporter BKD09_RS35475 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS35480 PF13458 Periplasmic binding protein BKD09_RS35485 PF01047 MarR family BKD09_RS35490 PF01557 Fumarylacetoacetate (FAA) hydrolase family BKD09_RS35500 PF00171 Aldehyde dehydrogenase family BKD09_RS35505 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BKD09_RS35510 PF01557 Fumarylacetoacetate (FAA) hydrolase family BKD09_RS35515 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BKD09_RS35515 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BKD09_RS35515 PF00205 Thiamine pyrophosphate enzyme, central domain BKD09_RS35520 PF13532 2OG-Fe(II) oxygenase superfamily BKD09_RS35525 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA BKD09_RS35535 PF01425 Amidase BKD09_RS35550 PF00106 short chain dehydrogenase BKD09_RS35555 PF08450 SMP-30/Gluconolactonase/LRE-like region BKD09_RS35560 PF00311 Phosphoenolpyruvate carboxylase BKD09_RS35575 PF00378 Enoyl-CoA hydratase/isomerase BKD09_RS35580 PF00501 AMP-binding enzyme BKD09_RS35580 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS35585 PF00378 Enoyl-CoA hydratase/isomerase BKD09_RS35595 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS35595 PF00501 AMP-binding enzyme BKD09_RS35600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BKD09_RS35600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BKD09_RS35600 PF02770 Acyl-CoA dehydrogenase, middle domain BKD09_RS35605 PF00378 Enoyl-CoA hydratase/isomerase BKD09_RS35620 PF00378 Enoyl-CoA hydratase/isomerase BKD09_RS35635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BKD09_RS35635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BKD09_RS35635 PF02770 Acyl-CoA dehydrogenase, middle domain BKD09_RS35640 PF01613 Flavin reductase like domain BKD09_RS35645 PF02798 Glutathione S-transferase, N-terminal domain BKD09_RS35655 PF03060 Nitronate monooxygenase BKD09_RS35670 PF00873 AcrB/AcrD/AcrF family BKD09_RS35675 PF00672 HAMP domain BKD09_RS35675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BKD09_RS35680 PF07005 Sugar-binding N-terminal domain BKD09_RS35680 PF17042 Nucleotide-binding C-terminal domain BKD09_RS35685 PF01261 Xylose isomerase-like TIM barrel BKD09_RS35690 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BKD09_RS35690 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BKD09_RS35695 PF00596 Class II Aldolase and Adducin N-terminal domain BKD09_RS35700 PF00005 ABC transporter BKD09_RS35705 PF00005 ABC transporter BKD09_RS35710 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS35715 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS35725 PF07286 Protein of unknown function (DUF1445) BKD09_RS35730 PF03466 LysR substrate binding domain BKD09_RS35730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS35735 PF07687 Peptidase dimerisation domain BKD09_RS35735 PF01546 Peptidase family M20/M25/M40 BKD09_RS35740 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BKD09_RS35740 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BKD09_RS35745 PF02615 Malate/L-lactate dehydrogenase BKD09_RS35755 PF00180 Isocitrate/isopropylmalate dehydrogenase BKD09_RS35765 PF01425 Amidase BKD09_RS35775 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS35780 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS35790 PF00202 Aminotransferase class-III BKD09_RS35795 PF00497 Bacterial extracellular solute-binding proteins, family 3 BKD09_RS35805 PF00440 Bacterial regulatory proteins, tetR family BKD09_RS35910 PF00890 FAD binding domain BKD09_RS35925 PF01220 Dehydroquinase class II BKD09_RS35930 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BKD09_RS35935 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BKD09_RS35940 PF03480 Bacterial extracellular solute-binding protein, family 7 BKD09_RS35955 PF08450 SMP-30/Gluconolactonase/LRE-like region BKD09_RS35975 PF00027 Cyclic nucleotide-binding domain BKD09_RS35975 PF13545 Crp-like helix-turn-helix domain BKD09_RS35990 PF04055 Radical SAM superfamily BKD09_RS35990 PF13282 Domain of unknown function (DUF4070) BKD09_RS35990 PF02310 B12 binding domain BKD09_RS35995 PF00067 Cytochrome P450 BKD09_RS36000 PF02554 Carbon starvation protein CstA BKD09_RS36000 PF13722 5TM C-terminal transporter carbon starvation CstA BKD09_RS36065 PF07995 Glucose / Sorbosone dehydrogenase BKD09_RS36085 PF07536 HWE histidine kinase BKD09_RS36085 PF08447 PAS fold BKD09_RS36085 PF13426 PAS domain BKD09_RS36105 PF06965 Na+/H+ antiporter 1 BKD09_RS36110 PF00072 Response regulator receiver domain BKD09_RS36110 PF13426 PAS domain BKD09_RS36110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS36160 PF02735 Ku70/Ku80 beta-barrel domain BKD09_RS36220 PF03972 MmgE/PrpD family BKD09_RS36245 PF04226 Transglycosylase associated protein BKD09_RS36270 PF08240 Alcohol dehydrogenase GroES-like domain BKD09_RS36270 PF00107 Zinc-binding dehydrogenase BKD09_RS36270 PF13823 Alcohol dehydrogenase GroES-associated BKD09_RS36280 PF05974 Domain of unknown function (DUF892) BKD09_RS36305 PF01569 PAP2 superfamily BKD09_RS36315 PF12697 Alpha/beta hydrolase family BKD09_RS36320 PF00360 Phytochrome region BKD09_RS36320 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS36320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS36320 PF01590 GAF domain BKD09_RS36320 PF08446 PAS fold BKD09_RS36325 PF10503 Esterase PHB depolymerase BKD09_RS36355 PF00067 Cytochrome P450 BKD09_RS36360 PF00083 Sugar (and other) transporter BKD09_RS36365 PF00174 Oxidoreductase molybdopterin binding domain BKD09_RS36375 PF00392 Bacterial regulatory proteins, gntR family BKD09_RS36375 PF00155 Aminotransferase class I and II BKD09_RS36380 PF00892 EamA-like transporter family BKD09_RS36390 PF00107 Zinc-binding dehydrogenase BKD09_RS36390 PF08240 Alcohol dehydrogenase GroES-like domain BKD09_RS36395 PF14535 AMP-binding enzyme C-terminal domain BKD09_RS36395 PF00501 AMP-binding enzyme BKD09_RS36400 PF03061 Thioesterase superfamily BKD09_RS36405 PF00175 Oxidoreductase NAD-binding domain BKD09_RS36405 PF00111 2Fe-2S iron-sulfur cluster binding domain BKD09_RS36405 PF00970 Oxidoreductase FAD-binding domain BKD09_RS36410 PF01883 Iron-sulfur cluster assembly protein BKD09_RS36415 PF05138 Phenylacetic acid catabolic protein BKD09_RS36420 PF06243 Phenylacetic acid degradation B BKD09_RS36425 PF05138 Phenylacetic acid catabolic protein BKD09_RS36430 PF08223 PaaX-like protein C-terminal domain BKD09_RS36430 PF07848 PaaX-like protein BKD09_RS36435 PF00561 alpha/beta hydrolase fold BKD09_RS36440 PF04286 Protein of unknown function (DUF445) BKD09_RS36450 PF13508 Acetyltransferase (GNAT) domain BKD09_RS36450 PF00583 Acetyltransferase (GNAT) family BKD09_RS36455 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus BKD09_RS36465 PF00561 alpha/beta hydrolase fold BKD09_RS36480 PF00175 Oxidoreductase NAD-binding domain BKD09_RS36480 PF00667 FAD binding domain BKD09_RS36480 PF00067 Cytochrome P450 BKD09_RS36480 PF00258 Flavodoxin BKD09_RS36485 PF00561 alpha/beta hydrolase fold BKD09_RS36490 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain BKD09_RS36490 PF06974 Protein of unknown function (DUF1298) BKD09_RS36510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKD09_RS36515 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS36520 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS36520 PF12911 N-terminal TM domain of oligopeptide transport permease C BKD09_RS36525 PF00005 ABC transporter BKD09_RS36525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKD09_RS36530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKD09_RS36530 PF00005 ABC transporter BKD09_RS36545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKD09_RS36545 PF00005 ABC transporter BKD09_RS36550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKD09_RS36550 PF00005 ABC transporter BKD09_RS36555 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKD09_RS36560 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS36565 PF12911 N-terminal TM domain of oligopeptide transport permease C BKD09_RS36565 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS36575 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS36580 PF02954 Bacterial regulatory protein, Fis family BKD09_RS36580 PF00158 Sigma-54 interaction domain BKD09_RS36580 PF00072 Response regulator receiver domain BKD09_RS36585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS36585 PF08447 PAS fold BKD09_RS36585 PF08448 PAS fold BKD09_RS36590 PF00873 AcrB/AcrD/AcrF family BKD09_RS36595 PF13533 Biotin-lipoyl like BKD09_RS36605 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BKD09_RS36605 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BKD09_RS36615 PF00067 Cytochrome P450 BKD09_RS36620 PF00202 Aminotransferase class-III BKD09_RS36645 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BKD09_RS36645 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BKD09_RS36655 PF00005 ABC transporter BKD09_RS36665 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS36670 PF00440 Bacterial regulatory proteins, tetR family BKD09_RS36670 PF17938 Tetracyclin repressor-like, C-terminal domain BKD09_RS36680 PF00294 pfkB family carbohydrate kinase BKD09_RS36685 PF00294 pfkB family carbohydrate kinase BKD09_RS36690 PF14759 Reductase C-terminal BKD09_RS36690 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKD09_RS36705 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BKD09_RS36715 PF03480 Bacterial extracellular solute-binding protein, family 7 BKD09_RS36720 PF00920 Dehydratase family BKD09_RS36730 PF03144 Elongation factor Tu domain 2 BKD09_RS36730 PF00009 Elongation factor Tu GTP binding domain BKD09_RS36730 PF03764 Elongation factor G, domain IV BKD09_RS36730 PF00679 Elongation factor G C-terminus BKD09_RS36730 PF14492 Elongation Factor G, domain II BKD09_RS36760 PF01370 NAD dependent epimerase/dehydratase family BKD09_RS36770 PF00171 Aldehyde dehydrogenase family BKD09_RS36775 PF00456 Transketolase, thiamine diphosphate binding domain BKD09_RS36775 PF17831 Pyruvate dehydrogenase E1 component middle domain BKD09_RS36780 PF01037 Lrp/AsnC ligand binding domain BKD09_RS36785 PF03976 Polyphosphate kinase 2 (PPK2) BKD09_RS36795 PF08240 Alcohol dehydrogenase GroES-like domain BKD09_RS36795 PF00107 Zinc-binding dehydrogenase BKD09_RS36800 PF00892 EamA-like transporter family BKD09_RS36805 PF00248 Aldo/keto reductase family BKD09_RS36810 PF08450 SMP-30/Gluconolactonase/LRE-like region BKD09_RS36815 PF04324 BFD-like [2Fe-2S] binding domain BKD09_RS36815 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BKD09_RS36815 PF00384 Molybdopterin oxidoreductase BKD09_RS36815 PF01568 Molydopterin dinucleotide binding domain BKD09_RS36820 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BKD09_RS36820 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BKD09_RS36820 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKD09_RS36820 PF04324 BFD-like [2Fe-2S] binding domain BKD09_RS36820 PF18267 Rubredoxin NAD+ reductase C-terminal domain BKD09_RS36825 PF00175 Oxidoreductase NAD-binding domain BKD09_RS36825 PF00042 Globin BKD09_RS36825 PF00970 Oxidoreductase FAD-binding domain BKD09_RS36830 PF07690 Major Facilitator Superfamily BKD09_RS36835 PF00005 ABC transporter BKD09_RS36840 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS36860 PF03793 PASTA domain BKD09_RS36860 PF00069 Protein kinase domain BKD09_RS36875 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS36875 PF13191 AAA ATPase domain BKD09_RS36880 PF04444 Catechol dioxygenase N terminus BKD09_RS36880 PF00775 Dioxygenase BKD09_RS36885 PF00144 Beta-lactamase BKD09_RS36890 PF13426 PAS domain BKD09_RS36890 PF08447 PAS fold BKD09_RS36890 PF07536 HWE histidine kinase BKD09_RS36895 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BKD09_RS36895 PF13378 Enolase C-terminal domain-like BKD09_RS36905 PF07715 TonB-dependent Receptor Plug Domain BKD09_RS36905 PF00593 TonB dependent receptor BKD09_RS36910 PF00072 Response regulator receiver domain BKD09_RS36910 PF00486 Transcriptional regulatory protein, C terminal BKD09_RS36915 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS36915 PF08521 Two-component sensor kinase N-terminal BKD09_RS36915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS36920 PF02683 Cytochrome C biogenesis protein transmembrane region BKD09_RS36935 PF01381 Helix-turn-helix BKD09_RS36945 PF00378 Enoyl-CoA hydratase/isomerase BKD09_RS36955 PF00180 Isocitrate/isopropylmalate dehydrogenase BKD09_RS36960 PF08240 Alcohol dehydrogenase GroES-like domain BKD09_RS36960 PF00107 Zinc-binding dehydrogenase BKD09_RS36965 PF00005 ABC transporter BKD09_RS36965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKD09_RS36970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKD09_RS36970 PF00005 ABC transporter BKD09_RS36975 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS36975 PF12911 N-terminal TM domain of oligopeptide transport permease C BKD09_RS36980 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS36985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKD09_RS36990 PF02515 CoA-transferase family III BKD09_RS36995 PF00534 Glycosyl transferases group 1 BKD09_RS36995 PF08323 Starch synthase catalytic domain BKD09_RS37010 PF03597 Cytochrome oxidase maturation protein cbb3-type BKD09_RS37015 PF00403 Heavy-metal-associated domain BKD09_RS37025 PF13746 4Fe-4S dicluster domain BKD09_RS37025 PF12801 4Fe-4S binding domain BKD09_RS37025 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase BKD09_RS37030 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP BKD09_RS37030 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BKD09_RS37045 PF00115 Cytochrome C and Quinol oxidase polypeptide I BKD09_RS37050 PF00478 IMP dehydrogenase / GMP reductase domain BKD09_RS37050 PF00571 CBS domain BKD09_RS37060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS37060 PF00989 PAS fold BKD09_RS37060 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS37065 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS37065 PF00072 Response regulator receiver domain BKD09_RS37070 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS37070 PF00072 Response regulator receiver domain BKD09_RS37075 PF00027 Cyclic nucleotide-binding domain BKD09_RS37075 PF13545 Crp-like helix-turn-helix domain BKD09_RS37080 PF07690 Major Facilitator Superfamily BKD09_RS37095 PF00664 ABC transporter transmembrane region BKD09_RS37095 PF00005 ABC transporter BKD09_RS37100 PF00534 Glycosyl transferases group 1 BKD09_RS37100 PF13439 Glycosyltransferase Family 4 BKD09_RS37105 PF14864 Alkyl sulfatase C-terminal BKD09_RS37105 PF14863 Alkyl sulfatase dimerisation BKD09_RS37105 PF00753 Metallo-beta-lactamase superfamily BKD09_RS37110 PF17158 Membrane-associated sensor, integral membrane domain BKD09_RS37110 PF00990 Diguanylate cyclase, GGDEF domain BKD09_RS37115 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BKD09_RS37120 PF03480 Bacterial extracellular solute-binding protein, family 7 BKD09_RS37125 PF13649 Methyltransferase domain BKD09_RS37155 PF01699 Sodium/calcium exchanger protein BKD09_RS37160 PF00180 Isocitrate/isopropylmalate dehydrogenase BKD09_RS37165 PF07690 Major Facilitator Superfamily BKD09_RS37170 PF13282 Domain of unknown function (DUF4070) BKD09_RS37170 PF04055 Radical SAM superfamily BKD09_RS37170 PF02310 B12 binding domain BKD09_RS37190 PF00919 Uncharacterized protein family UPF0004 BKD09_RS37190 PF04055 Radical SAM superfamily BKD09_RS37190 PF01938 TRAM domain BKD09_RS37205 PF00111 2Fe-2S iron-sulfur cluster binding domain BKD09_RS37205 PF01799 [2Fe-2S] binding domain BKD09_RS37210 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BKD09_RS37215 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKD09_RS37215 PF10518 TAT (twin-arginine translocation) pathway signal sequence BKD09_RS37215 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding BKD09_RS37240 PF01547 Bacterial extracellular solute-binding protein BKD09_RS37245 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS37250 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS37255 PF00326 Prolyl oligopeptidase family BKD09_RS37265 PF00857 Isochorismatase family BKD09_RS37280 PF00890 FAD binding domain BKD09_RS37285 PF13180 PDZ domain BKD09_RS37295 PF00732 GMC oxidoreductase BKD09_RS37295 PF05199 GMC oxidoreductase BKD09_RS37305 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BKD09_RS37310 PF00510 Cytochrome c oxidase subunit III BKD09_RS37315 PF00115 Cytochrome C and Quinol oxidase polypeptide I BKD09_RS37320 PF06481 COX Aromatic Rich Motif BKD09_RS37320 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BKD09_RS37340 PF07995 Glucose / Sorbosone dehydrogenase BKD09_RS37360 PF03401 Tripartite tricarboxylate transporter family receptor BKD09_RS37385 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BKD09_RS37385 PF00529 HlyD membrane-fusion protein of T1SS BKD09_RS37390 PF03466 LysR substrate binding domain BKD09_RS37390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS37405 PF00873 AcrB/AcrD/AcrF family BKD09_RS37410 PF13533 Biotin-lipoyl like BKD09_RS37420 PF13505 Outer membrane protein beta-barrel domain BKD09_RS37425 PF07687 Peptidase dimerisation domain BKD09_RS37425 PF01546 Peptidase family M20/M25/M40 BKD09_RS37435 PF13378 Enolase C-terminal domain-like BKD09_RS37435 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BKD09_RS37440 PF07687 Peptidase dimerisation domain BKD09_RS37440 PF01546 Peptidase family M20/M25/M40 BKD09_RS37460 PF00701 Dihydrodipicolinate synthetase family BKD09_RS37470 PF00356 Bacterial regulatory proteins, lacI family BKD09_RS37475 PF02515 CoA-transferase family III BKD09_RS37490 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS37490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS37495 PF14376 Haem-binding domain BKD09_RS37495 PF03150 Di-haem cytochrome c peroxidase BKD09_RS37495 PF00034 Cytochrome c BKD09_RS37505 PF00072 Response regulator receiver domain BKD09_RS37505 PF00486 Transcriptional regulatory protein, C terminal BKD09_RS37515 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BKD09_RS37520 PF07690 Major Facilitator Superfamily BKD09_RS37560 PF00118 TCP-1/cpn60 chaperonin family BKD09_RS37565 PF00166 Chaperonin 10 Kd subunit BKD09_RS37580 PF12806 Acetyl-CoA dehydrogenase C-terminal like BKD09_RS37580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BKD09_RS37580 PF02770 Acyl-CoA dehydrogenase, middle domain BKD09_RS37580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BKD09_RS37595 PF00746 LPXTG cell wall anchor motif BKD09_RS37595 PF00149 Calcineurin-like phosphoesterase BKD09_RS37595 PF00565 Staphylococcal nuclease homologue BKD09_RS37595 PF02872 5'-nucleotidase, C-terminal domain BKD09_RS37600 PF00850 Histone deacetylase domain BKD09_RS37605 PF02609 Exonuclease VII small subunit BKD09_RS37610 PF02779 Transketolase, pyrimidine binding domain BKD09_RS37610 PF02780 Transketolase, C-terminal domain BKD09_RS37610 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BKD09_RS37620 PF01479 S4 domain BKD09_RS37620 PF01728 FtsJ-like methyltransferase BKD09_RS37625 PF05175 Methyltransferase small domain BKD09_RS37630 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS37635 PF00005 ABC transporter BKD09_RS37645 PF02515 CoA-transferase family III BKD09_RS37650 PF00682 HMGL-like BKD09_RS37665 PF13847 Methyltransferase domain BKD09_RS37675 PF00378 Enoyl-CoA hydratase/isomerase BKD09_RS37690 PF07690 Major Facilitator Superfamily BKD09_RS37695 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BKD09_RS37700 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BKD09_RS37705 PF02641 Uncharacterized ACR, COG1993 BKD09_RS37710 PF02617 ATP-dependent Clp protease adaptor protein ClpS BKD09_RS37715 PF00072 Response regulator receiver domain BKD09_RS37715 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS37720 PF01264 Chorismate synthase BKD09_RS37735 PF04542 Sigma-70 region 2 BKD09_RS37735 PF08281 Sigma-70, region 4 BKD09_RS37745 PF00226 DnaJ domain BKD09_RS37745 PF01556 DnaJ C terminal domain BKD09_RS37755 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BKD09_RS37755 PF01243 Pyridoxamine 5'-phosphate oxidase BKD09_RS37775 PF01544 CorA-like Mg2+ transporter protein BKD09_RS37780 PF03734 L,D-transpeptidase catalytic domain BKD09_RS37790 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS37790 PF00501 AMP-binding enzyme BKD09_RS37805 PF02770 Acyl-CoA dehydrogenase, middle domain BKD09_RS37805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BKD09_RS37805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BKD09_RS37810 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BKD09_RS37810 PF00925 GTP cyclohydrolase II BKD09_RS37815 PF00999 Sodium/hydrogen exchanger family BKD09_RS37825 PF00155 Aminotransferase class I and II BKD09_RS37845 PF00248 Aldo/keto reductase family BKD09_RS37850 PF16655 PhoD-like phosphatase, N-terminal domain BKD09_RS37850 PF09423 PhoD-like phosphatase BKD09_RS37860 PF03060 Nitronate monooxygenase BKD09_RS37870 PF01638 HxlR-like helix-turn-helix BKD09_RS37910 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS37910 PF00672 HAMP domain BKD09_RS37910 PF01627 Hpt domain BKD09_RS37910 PF00072 Response regulator receiver domain BKD09_RS37910 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BKD09_RS37910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS37915 PF07536 HWE histidine kinase BKD09_RS37915 PF13426 PAS domain BKD09_RS37955 PF13180 PDZ domain BKD09_RS37970 PF00834 Ribulose-phosphate 3 epimerase family BKD09_RS37975 PF00004 ATPase family associated with various cellular activities (AAA) BKD09_RS37975 PF17866 AAA lid domain BKD09_RS37980 PF00101 Ribulose bisphosphate carboxylase, small chain BKD09_RS37985 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain BKD09_RS37985 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain BKD09_RS37990 PF01116 Fructose-bisphosphate aldolase class-II BKD09_RS37995 PF00456 Transketolase, thiamine diphosphate binding domain BKD09_RS37995 PF02780 Transketolase, C-terminal domain BKD09_RS37995 PF02779 Transketolase, pyrimidine binding domain BKD09_RS38000 PF00485 Phosphoribulokinase / Uridine kinase family BKD09_RS38005 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BKD09_RS38010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS38010 PF03466 LysR substrate binding domain BKD09_RS38015 PF00593 TonB dependent receptor BKD09_RS38015 PF07715 TonB-dependent Receptor Plug Domain BKD09_RS38030 PF07690 Major Facilitator Superfamily BKD09_RS38035 PF00440 Bacterial regulatory proteins, tetR family BKD09_RS38080 PF01300 Telomere recombination BKD09_RS38080 PF03481 Putative GTP-binding controlling metal-binding BKD09_RS38085 PF01565 FAD binding domain BKD09_RS38085 PF02913 FAD linked oxidases, C-terminal domain BKD09_RS38095 PF00293 NUDIX domain BKD09_RS38105 PF02515 CoA-transferase family III BKD09_RS38110 PF02586 SOS response associated peptidase (SRAP) BKD09_RS38120 PF00293 NUDIX domain BKD09_RS38145 PF08281 Sigma-70, region 4 BKD09_RS38145 PF04542 Sigma-70 region 2 BKD09_RS38150 PF00581 Rhodanese-like domain BKD09_RS38155 PF01979 Amidohydrolase family BKD09_RS38160 PF01571 Aminomethyltransferase folate-binding domain BKD09_RS38165 PF00958 GMP synthase C terminal domain BKD09_RS38165 PF03352 Methyladenine glycosylase BKD09_RS38165 PF13302 Acetyltransferase (GNAT) domain BKD09_RS38165 PF13673 Acetyltransferase (GNAT) domain BKD09_RS38165 PF00117 Glutamine amidotransferase class-I BKD09_RS38170 PF01966 HD domain BKD09_RS38195 PF00672 HAMP domain BKD09_RS38195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BKD09_RS38200 PF00672 HAMP domain BKD09_RS38200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BKD09_RS38205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BKD09_RS38205 PF08269 Cache domain BKD09_RS38220 PF00107 Zinc-binding dehydrogenase BKD09_RS38220 PF08240 Alcohol dehydrogenase GroES-like domain BKD09_RS38225 PF07690 Major Facilitator Superfamily BKD09_RS38230 PF02445 Quinolinate synthetase A protein BKD09_RS38235 PF02910 Fumarate reductase flavoprotein C-term BKD09_RS38235 PF00890 FAD binding domain BKD09_RS38240 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BKD09_RS38240 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BKD09_RS38245 PF07486 Cell Wall Hydrolase BKD09_RS38245 PF01471 Putative peptidoglycan binding domain BKD09_RS38250 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BKD09_RS38250 PF00391 PEP-utilising enzyme, mobile domain BKD09_RS38250 PF02896 PEP-utilising enzyme, TIM barrel domain BKD09_RS38260 PF02092 Glycyl-tRNA synthetase beta subunit BKD09_RS38260 PF05746 DALR anticodon binding domain BKD09_RS38265 PF02091 Glycyl-tRNA synthetase alpha subunit BKD09_RS38275 PF01343 Peptidase family S49 BKD09_RS38275 PF06965 Na+/H+ antiporter 1 BKD09_RS38290 PF00348 Polyprenyl synthetase BKD09_RS38295 PF01638 HxlR-like helix-turn-helix BKD09_RS38300 PF00109 Beta-ketoacyl synthase, N-terminal domain BKD09_RS38300 PF02801 Beta-ketoacyl synthase, C-terminal domain BKD09_RS38305 PF01810 LysE type translocator BKD09_RS38320 PF08386 TAP-like protein BKD09_RS38320 PF00561 alpha/beta hydrolase fold BKD09_RS38325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS38325 PF03466 LysR substrate binding domain BKD09_RS38335 PF08544 GHMP kinases C terminal BKD09_RS38335 PF00288 GHMP kinases N terminal domain BKD09_RS38350 PF03167 Uracil DNA glycosylase superfamily BKD09_RS38360 PF01351 Ribonuclease HII BKD09_RS38375 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase BKD09_RS38375 PF09363 XFP C-terminal domain BKD09_RS38375 PF09364 XFP N-terminal domain BKD09_RS38380 PF00871 Acetokinase family BKD09_RS38400 PF00583 Acetyltransferase (GNAT) family BKD09_RS38400 PF01047 MarR family BKD09_RS38405 PF00994 Probable molybdopterin binding domain BKD09_RS38410 PF04228 Putative neutral zinc metallopeptidase BKD09_RS38415 PF01555 DNA methylase BKD09_RS38415 PF18755 Restriction Enzyme Adenine Methylase Associated BKD09_RS38425 PF01370 NAD dependent epimerase/dehydratase family BKD09_RS38430 PF03466 LysR substrate binding domain BKD09_RS38430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS38435 PF00043 Glutathione S-transferase, C-terminal domain BKD09_RS38435 PF02798 Glutathione S-transferase, N-terminal domain BKD09_RS38440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BKD09_RS38440 PF00672 HAMP domain BKD09_RS38445 PF16591 Helical bimodular sensor domain BKD09_RS38445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BKD09_RS38445 PF00672 HAMP domain BKD09_RS38450 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS38450 PF00360 Phytochrome region BKD09_RS38450 PF08446 PAS fold BKD09_RS38450 PF01590 GAF domain BKD09_RS38450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS38465 PF03466 LysR substrate binding domain BKD09_RS38465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS38470 PF14497 Glutathione S-transferase, C-terminal domain BKD09_RS38470 PF02798 Glutathione S-transferase, N-terminal domain BKD09_RS38475 PF01494 FAD binding domain BKD09_RS38490 PF14815 NUDIX domain BKD09_RS38490 PF00730 HhH-GPD superfamily base excision DNA repair protein BKD09_RS38500 PF13462 Thioredoxin BKD09_RS38500 PF06965 Na+/H+ antiporter 1 BKD09_RS38505 PF02463 RecF/RecN/SMC N terminal domain BKD09_RS38515 PF04011 LemA family BKD09_RS38520 PF01435 Peptidase family M48 BKD09_RS38540 PF00156 Phosphoribosyl transferase domain BKD09_RS38545 PF00117 Glutamine amidotransferase class-I BKD09_RS38545 PF00425 chorismate binding enzyme BKD09_RS38545 PF04715 Anthranilate synthase component I, N terminal region BKD09_RS38550 PF01738 Dienelactone hydrolase family BKD09_RS38555 PF00033 Cytochrome b/b6/petB BKD09_RS38555 PF02167 Cytochrome C1 family BKD09_RS38555 PF00032 Cytochrome b(C-terminal)/b6/petD BKD09_RS38560 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal BKD09_RS38560 PF00355 Rieske [2Fe-2S] domain BKD09_RS38565 PF00588 SpoU rRNA Methylase family BKD09_RS38580 PF01218 Coproporphyrinogen III oxidase BKD09_RS38595 PF13505 Outer membrane protein beta-barrel domain BKD09_RS38605 PF01425 Amidase BKD09_RS38610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS38610 PF03466 LysR substrate binding domain BKD09_RS38625 PF00107 Zinc-binding dehydrogenase BKD09_RS38625 PF00698 Acyl transferase domain BKD09_RS38625 PF08240 Alcohol dehydrogenase GroES-like domain BKD09_RS38625 PF16197 Ketoacyl-synthetase C-terminal extension BKD09_RS38625 PF00109 Beta-ketoacyl synthase, N-terminal domain BKD09_RS38625 PF02801 Beta-ketoacyl synthase, C-terminal domain BKD09_RS38625 PF08659 KR domain BKD09_RS38625 PF00550 Phosphopantetheine attachment site BKD09_RS38625 PF14765 Polyketide synthase dehydratase BKD09_RS38640 PF13360 PQQ-like domain BKD09_RS38640 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BKD09_RS38650 PF13735 tRNA nucleotidyltransferase domain 2 putative BKD09_RS38650 PF01743 Poly A polymerase head domain BKD09_RS38650 PF12627 Probable RNA and SrmB- binding site of polymerase A BKD09_RS38660 PF00293 NUDIX domain BKD09_RS38670 PF17863 AAA lid domain BKD09_RS38670 PF07726 ATPase family associated with various cellular activities (AAA) BKD09_RS38695 PF07715 TonB-dependent Receptor Plug Domain BKD09_RS38695 PF00593 TonB dependent receptor BKD09_RS38705 PF00583 Acetyltransferase (GNAT) family BKD09_RS38715 PF00535 Glycosyl transferase family 2 BKD09_RS38730 PF00293 NUDIX domain BKD09_RS38750 PF00463 Isocitrate lyase family BKD09_RS38755 PF06114 IrrE N-terminal-like domain BKD09_RS38755 PF01381 Helix-turn-helix BKD09_RS38755 PF09856 Predicted transcriptional regulator (DUF2083) BKD09_RS38780 PF01435 Peptidase family M48 BKD09_RS38795 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BKD09_RS38810 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS38815 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS38820 PF00005 ABC transporter BKD09_RS38820 PF08402 TOBE domain BKD09_RS38825 PF00005 ABC transporter BKD09_RS38825 PF08402 TOBE domain BKD09_RS38830 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BKD09_RS38830 PF01266 FAD dependent oxidoreductase BKD09_RS38840 PF01850 PIN domain BKD09_RS38845 PF00455 DeoR C terminal sensor domain BKD09_RS38845 PF08220 DeoR-like helix-turn-helix domain BKD09_RS38850 PF13419 Haloacid dehalogenase-like hydrolase BKD09_RS38880 PF03061 Thioesterase superfamily BKD09_RS38885 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BKD09_RS38885 PF00378 Enoyl-CoA hydratase/isomerase BKD09_RS38885 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BKD09_RS38890 PF02803 Thiolase, C-terminal domain BKD09_RS38890 PF00108 Thiolase, N-terminal domain BKD09_RS38895 PF02770 Acyl-CoA dehydrogenase, middle domain BKD09_RS38895 PF09317 Domain of unknown function (DUF1974) BKD09_RS38895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BKD09_RS38895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BKD09_RS38905 PF00440 Bacterial regulatory proteins, tetR family BKD09_RS38910 PF00873 AcrB/AcrD/AcrF family BKD09_RS38920 PF11455 Protein of unknown function (DUF3018) BKD09_RS38925 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system BKD09_RS38930 PF07690 Major Facilitator Superfamily BKD09_RS38940 PF06224 Winged helix DNA-binding domain BKD09_RS38955 PF01389 OmpA-like transmembrane domain BKD09_RS38955 PF00691 OmpA family BKD09_RS38990 PF05532 CsbD-like BKD09_RS38995 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BKD09_RS39005 PF00581 Rhodanese-like domain BKD09_RS39005 PF17773 UPF0176 acylphosphatase like domain BKD09_RS39010 PF04102 SlyX BKD09_RS39015 PF01590 GAF domain BKD09_RS39015 PF00360 Phytochrome region BKD09_RS39015 PF00990 Diguanylate cyclase, GGDEF domain BKD09_RS39015 PF00563 EAL domain BKD09_RS39025 PF01208 Uroporphyrinogen decarboxylase (URO-D) BKD09_RS39030 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BKD09_RS39030 PF03900 Porphobilinogen deaminase, C-terminal domain BKD09_RS39035 PF05199 GMC oxidoreductase BKD09_RS39035 PF00732 GMC oxidoreductase BKD09_RS39040 PF00440 Bacterial regulatory proteins, tetR family BKD09_RS39040 PF08361 MAATS-type transcriptional repressor, C-terminal region BKD09_RS39050 PF13188 PAS domain BKD09_RS39050 PF00563 EAL domain BKD09_RS39050 PF03707 Bacterial signalling protein N terminal repeat BKD09_RS39050 PF00990 Diguanylate cyclase, GGDEF domain BKD09_RS39060 PF00970 Oxidoreductase FAD-binding domain BKD09_RS39060 PF00111 2Fe-2S iron-sulfur cluster binding domain BKD09_RS39060 PF00175 Oxidoreductase NAD-binding domain BKD09_RS39070 PF00355 Rieske [2Fe-2S] domain BKD09_RS39075 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BKD09_RS39075 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BKD09_RS39075 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BKD09_RS39075 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BKD09_RS39085 PF00486 Transcriptional regulatory protein, C terminal BKD09_RS39085 PF00072 Response regulator receiver domain BKD09_RS39095 PF12706 Beta-lactamase superfamily domain BKD09_RS39105 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BKD09_RS39105 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BKD09_RS39105 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BKD09_RS39110 PF01370 NAD dependent epimerase/dehydratase family BKD09_RS39115 PF16363 GDP-mannose 4,6 dehydratase BKD09_RS39120 PF01370 NAD dependent epimerase/dehydratase family BKD09_RS39125 PF00534 Glycosyl transferases group 1 BKD09_RS39125 PF13439 Glycosyltransferase Family 4 BKD09_RS39130 PF13439 Glycosyltransferase Family 4 BKD09_RS39130 PF00534 Glycosyl transferases group 1 BKD09_RS39145 PF00534 Glycosyl transferases group 1 BKD09_RS39145 PF13439 Glycosyltransferase Family 4 BKD09_RS39150 PF00534 Glycosyl transferases group 1 BKD09_RS39150 PF13439 Glycosyltransferase Family 4 BKD09_RS39160 PF13439 Glycosyltransferase Family 4 BKD09_RS39160 PF00534 Glycosyl transferases group 1 BKD09_RS39175 PF00132 Bacterial transferase hexapeptide (six repeats) BKD09_RS39175 PF06426 Serine acetyltransferase, N-terminal BKD09_RS39180 PF01943 Polysaccharide biosynthesis protein BKD09_RS39185 PF01757 Acyltransferase family BKD09_RS39195 PF01757 Acyltransferase family BKD09_RS39220 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BKD09_RS39220 PF13807 G-rich domain on putative tyrosine kinase BKD09_RS39220 PF02706 Chain length determinant protein BKD09_RS39230 PF01757 Acyltransferase family BKD09_RS39240 PF02397 Bacterial sugar transferase BKD09_RS39250 PF00149 Calcineurin-like phosphoesterase BKD09_RS39305 PF00072 Response regulator receiver domain BKD09_RS39305 PF01339 CheB methylesterase BKD09_RS39310 PF03705 CheR methyltransferase, all-alpha domain BKD09_RS39310 PF01739 CheR methyltransferase, SAM binding domain BKD09_RS39315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BKD09_RS39315 PF00672 HAMP domain BKD09_RS39315 PF12729 Four helix bundle sensory module for signal transduction BKD09_RS39320 PF01584 CheW-like domain BKD09_RS39325 PF00672 HAMP domain BKD09_RS39325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BKD09_RS39325 PF16591 Helical bimodular sensor domain BKD09_RS39330 PF01584 CheW-like domain BKD09_RS39335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS39335 PF02895 Signal transducing histidine kinase, homodimeric domain BKD09_RS39335 PF01627 Hpt domain BKD09_RS39335 PF01584 CheW-like domain BKD09_RS39340 PF00486 Transcriptional regulatory protein, C terminal BKD09_RS39340 PF00072 Response regulator receiver domain BKD09_RS39350 PF00072 Response regulator receiver domain BKD09_RS39360 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS39370 PF01494 FAD binding domain BKD09_RS39385 PF00775 Dioxygenase BKD09_RS39390 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal BKD09_RS39390 PF00775 Dioxygenase BKD09_RS39395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS39395 PF03466 LysR substrate binding domain BKD09_RS39400 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BKD09_RS39400 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BKD09_RS39405 PF05231 MASE1 BKD09_RS39405 PF00990 Diguanylate cyclase, GGDEF domain BKD09_RS39405 PF08447 PAS fold BKD09_RS39405 PF08448 PAS fold BKD09_RS39405 PF13426 PAS domain BKD09_RS39405 PF00563 EAL domain BKD09_RS39425 PF00501 AMP-binding enzyme BKD09_RS39425 PF01553 Acyltransferase BKD09_RS39435 PF02600 Disulfide bond formation protein DsbB BKD09_RS39450 PF03358 NADPH-dependent FMN reductase BKD09_RS39450 PF04205 FMN-binding domain BKD09_RS39450 PF00890 FAD binding domain BKD09_RS39455 PF07729 FCD domain BKD09_RS39455 PF00392 Bacterial regulatory proteins, gntR family BKD09_RS39460 PF04073 Aminoacyl-tRNA editing domain BKD09_RS39465 PF01568 Molydopterin dinucleotide binding domain BKD09_RS39465 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BKD09_RS39465 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BKD09_RS39465 PF12838 4Fe-4S dicluster domain BKD09_RS39465 PF00384 Molybdopterin oxidoreductase BKD09_RS39470 PF10531 SLBB domain BKD09_RS39470 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BKD09_RS39470 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BKD09_RS39480 PF07690 Major Facilitator Superfamily BKD09_RS39485 PF01206 Sulfurtransferase TusA BKD09_RS39490 PF03453 MoeA N-terminal region (domain I and II) BKD09_RS39490 PF00994 Probable molybdopterin binding domain BKD09_RS39490 PF03454 MoeA C-terminal region (domain IV) BKD09_RS39495 PF03205 Molybdopterin guanine dinucleotide synthesis protein B BKD09_RS39500 PF02634 FdhD/NarQ family BKD09_RS39505 PF12804 MobA-like NTP transferase domain BKD09_RS39510 PF01494 FAD binding domain BKD09_RS39515 PF03454 MoeA C-terminal region (domain IV) BKD09_RS39515 PF03453 MoeA N-terminal region (domain I and II) BKD09_RS39515 PF00994 Probable molybdopterin binding domain BKD09_RS39525 PF12849 PBP superfamily domain BKD09_RS39550 PF03401 Tripartite tricarboxylate transporter family receptor BKD09_RS39570 PF13191 AAA ATPase domain BKD09_RS39570 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS39585 PF00348 Polyprenyl synthetase BKD09_RS39625 PF03435 Saccharopine dehydrogenase NADP binding domain BKD09_RS39665 PF08241 Methyltransferase domain BKD09_RS39670 PF00005 ABC transporter BKD09_RS39695 PF01950 Fructose-1,6-bisphosphatase BKD09_RS39700 PF00365 Phosphofructokinase BKD09_RS39710 PF00313 'Cold-shock' DNA-binding domain BKD09_RS39720 PF03699 Uncharacterised protein family (UPF0182) BKD09_RS39730 PF13247 4Fe-4S dicluster domain BKD09_RS39735 PF12838 4Fe-4S dicluster domain BKD09_RS39735 PF00384 Molybdopterin oxidoreductase BKD09_RS39735 PF01568 Molydopterin dinucleotide binding domain BKD09_RS39735 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BKD09_RS39735 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BKD09_RS39780 PF00034 Cytochrome c BKD09_RS39795 PF13840 ACT domain BKD09_RS39795 PF01842 ACT domain BKD09_RS39795 PF00696 Amino acid kinase family BKD09_RS39815 PF13382 Adenine deaminase C-terminal domain BKD09_RS39815 PF01979 Amidohydrolase family BKD09_RS39825 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BKD09_RS39825 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BKD09_RS39825 PF00378 Enoyl-CoA hydratase/isomerase BKD09_RS39845 PF13191 AAA ATPase domain BKD09_RS39845 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS39880 PF04542 Sigma-70 region 2 BKD09_RS39880 PF08281 Sigma-70, region 4 BKD09_RS39890 PF07690 Major Facilitator Superfamily BKD09_RS39905 PF00440 Bacterial regulatory proteins, tetR family BKD09_RS39915 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BKD09_RS39915 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BKD09_RS39920 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS39950 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS39990 PF13458 Periplasmic binding protein BKD09_RS39995 PF00753 Metallo-beta-lactamase superfamily BKD09_RS40000 PF03401 Tripartite tricarboxylate transporter family receptor BKD09_RS40040 PF02515 CoA-transferase family III BKD09_RS40045 PF13458 Periplasmic binding protein BKD09_RS40050 PF00005 ABC transporter BKD09_RS40055 PF00005 ABC transporter BKD09_RS40055 PF12399 Branched-chain amino acid ATP-binding cassette transporter BKD09_RS40065 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS40075 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BKD09_RS40075 PF13378 Enolase C-terminal domain-like BKD09_RS40080 PF01791 DeoC/LacD family aldolase BKD09_RS40085 PF00294 pfkB family carbohydrate kinase BKD09_RS40090 PF17912 MalK OB fold domain BKD09_RS40090 PF03459 TOBE domain BKD09_RS40090 PF00005 ABC transporter BKD09_RS40095 PF00107 Zinc-binding dehydrogenase BKD09_RS40095 PF08240 Alcohol dehydrogenase GroES-like domain BKD09_RS40100 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS40105 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS40110 PF01547 Bacterial extracellular solute-binding protein BKD09_RS40115 PF00356 Bacterial regulatory proteins, lacI family BKD09_RS40130 PF00331 Glycosyl hydrolase family 10 BKD09_RS40145 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS40150 PF00668 Condensation domain BKD09_RS40150 PF00501 AMP-binding enzyme BKD09_RS40150 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS40150 PF00975 Thioesterase domain BKD09_RS40150 PF00550 Phosphopantetheine attachment site BKD09_RS40160 PF00296 Luciferase-like monooxygenase BKD09_RS40165 PF00005 ABC transporter BKD09_RS40170 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS40180 PF13545 Crp-like helix-turn-helix domain BKD09_RS40180 PF00027 Cyclic nucleotide-binding domain BKD09_RS40185 PF00850 Histone deacetylase domain BKD09_RS40210 PF00378 Enoyl-CoA hydratase/isomerase BKD09_RS40220 PF01266 FAD dependent oxidoreductase BKD09_RS40225 PF00005 ABC transporter BKD09_RS40230 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS40235 PF00497 Bacterial extracellular solute-binding proteins, family 3 BKD09_RS40245 PF01266 FAD dependent oxidoreductase BKD09_RS40250 PF00202 Aminotransferase class-III BKD09_RS40260 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BKD09_RS40260 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BKD09_RS40265 PF00941 FAD binding domain in molybdopterin dehydrogenase BKD09_RS40265 PF03450 CO dehydrogenase flavoprotein C-terminal domain BKD09_RS40270 PF10518 TAT (twin-arginine translocation) pathway signal sequence BKD09_RS40270 PF00111 2Fe-2S iron-sulfur cluster binding domain BKD09_RS40270 PF01799 [2Fe-2S] binding domain BKD09_RS40275 PF17925 Tetracyclin repressor-like, C-terminal domain BKD09_RS40275 PF00440 Bacterial regulatory proteins, tetR family BKD09_RS40320 PF00771 FHIPEP family BKD09_RS40330 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKD09_RS40345 PF04545 Sigma-70, region 4 BKD09_RS40345 PF04542 Sigma-70 region 2 BKD09_RS40355 PF02874 ATP synthase alpha/beta family, beta-barrel domain BKD09_RS40355 PF18269 T3SS EscN ATPase C-terminal domain BKD09_RS40355 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BKD09_RS40360 PF00072 Response regulator receiver domain BKD09_RS40360 PF00486 Transcriptional regulatory protein, C terminal BKD09_RS40365 PF03994 Domain of Unknown Function (DUF350) BKD09_RS40375 PF03738 Glutathionylspermidine synthase preATP-grasp BKD09_RS40385 PF01739 CheR methyltransferase, SAM binding domain BKD09_RS40385 PF03705 CheR methyltransferase, all-alpha domain BKD09_RS40390 PF00072 Response regulator receiver domain BKD09_RS40390 PF01339 CheB methylesterase BKD09_RS40395 PF02895 Signal transducing histidine kinase, homodimeric domain BKD09_RS40395 PF00072 Response regulator receiver domain BKD09_RS40395 PF01627 Hpt domain BKD09_RS40395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS40395 PF01584 CheW-like domain BKD09_RS40400 PF01584 CheW-like domain BKD09_RS40405 PF00072 Response regulator receiver domain BKD09_RS40405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS40405 PF01584 CheW-like domain BKD09_RS40405 PF02895 Signal transducing histidine kinase, homodimeric domain BKD09_RS40405 PF01627 Hpt domain BKD09_RS40410 PF10090 Histidine phosphotransferase C-terminal domain BKD09_RS40415 PF00459 Inositol monophosphatase family BKD09_RS40460 PF13581 Histidine kinase-like ATPase domain BKD09_RS40460 PF07568 Histidine kinase BKD09_RS40460 PF13426 PAS domain BKD09_RS40470 PF13426 PAS domain BKD09_RS40470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS40470 PF00072 Response regulator receiver domain BKD09_RS40475 PF06745 KaiC BKD09_RS40480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS40480 PF13426 PAS domain BKD09_RS40480 PF00072 Response regulator receiver domain BKD09_RS40490 PF00171 Aldehyde dehydrogenase family BKD09_RS40495 PF17912 MalK OB fold domain BKD09_RS40495 PF00005 ABC transporter BKD09_RS40505 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BKD09_RS40510 PF03480 Bacterial extracellular solute-binding protein, family 7 BKD09_RS40515 PF02780 Transketolase, C-terminal domain BKD09_RS40515 PF02779 Transketolase, pyrimidine binding domain BKD09_RS40520 PF00456 Transketolase, thiamine diphosphate binding domain BKD09_RS40530 PF03466 LysR substrate binding domain BKD09_RS40530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS40550 PF00872 Transposase, Mutator family BKD09_RS40620 PF00348 Polyprenyl synthetase BKD09_RS40625 PF00067 Cytochrome P450 BKD09_RS40640 PF00067 Cytochrome P450 BKD09_RS40645 PF00067 Cytochrome P450 BKD09_RS40650 PF00067 Cytochrome P450 BKD09_RS40660 PF03543 Yersinia/Haemophilus virulence surface antigen BKD09_RS40670 PF02899 Phage integrase, N-terminal SAM-like domain BKD09_RS40670 PF00589 Phage integrase family BKD09_RS40675 PF00589 Phage integrase family BKD09_RS40680 PF00155 Aminotransferase class I and II BKD09_RS40685 PF01588 Putative tRNA binding domain BKD09_RS40685 PF08264 Anticodon-binding domain of tRNA BKD09_RS40685 PF09334 tRNA synthetases class I (M) BKD09_RS40705 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) BKD09_RS40735 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BKD09_RS40760 PF00313 'Cold-shock' DNA-binding domain BKD09_RS40780 PF02463 RecF/RecN/SMC N terminal domain BKD09_RS40810 PF00027 Cyclic nucleotide-binding domain BKD09_RS40810 PF13545 Crp-like helix-turn-helix domain BKD09_RS40815 PF00668 Condensation domain BKD09_RS40815 PF00550 Phosphopantetheine attachment site BKD09_RS40815 PF00501 AMP-binding enzyme BKD09_RS40815 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS40825 PF00550 Phosphopantetheine attachment site BKD09_RS40825 PF07993 Male sterility protein BKD09_RS40825 PF00668 Condensation domain BKD09_RS40825 PF00501 AMP-binding enzyme BKD09_RS40825 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS40830 PF06339 Ectoine synthase BKD09_RS40855 PF02569 Pantoate-beta-alanine ligase BKD09_RS40860 PF02548 Ketopantoate hydroxymethyltransferase BKD09_RS40870 PF00202 Aminotransferase class-III BKD09_RS40880 PF00155 Aminotransferase class I and II BKD09_RS40885 PF02261 Aspartate decarboxylase BKD09_RS40890 PF06968 Biotin and Thiamin Synthesis associated domain BKD09_RS40890 PF04055 Radical SAM superfamily BKD09_RS40905 PF00425 chorismate binding enzyme BKD09_RS40905 PF04715 Anthranilate synthase component I, N terminal region BKD09_RS40910 PF00117 Glutamine amidotransferase class-I BKD09_RS40930 PF00120 Glutamine synthetase, catalytic domain BKD09_RS40945 PF07722 Peptidase C26 BKD09_RS41000 PF08267 Cobalamin-independent synthase, N-terminal domain BKD09_RS41000 PF01717 Cobalamin-independent synthase, Catalytic domain BKD09_RS41015 PF00484 Carbonic anhydrase BKD09_RS41020 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BKD09_RS41025 PF05050 Methyltransferase FkbM domain BKD09_RS41030 PF00166 Chaperonin 10 Kd subunit BKD09_RS41035 PF00118 TCP-1/cpn60 chaperonin family BKD09_RS41040 PF03543 Yersinia/Haemophilus virulence surface antigen BKD09_RS41060 PF13683 Integrase core domain BKD09_RS41060 PF13276 HTH-like domain BKD09_RS41065 PF01527 Transposase BKD09_RS41070 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BKD09_RS41085 PF02885 Glycosyl transferase family, helical bundle domain BKD09_RS41085 PF00591 Glycosyl transferase family, a/b domain BKD09_RS41115 PF01012 Electron transfer flavoprotein domain BKD09_RS41120 PF02954 Bacterial regulatory protein, Fis family BKD09_RS41120 PF01590 GAF domain BKD09_RS41120 PF00158 Sigma-54 interaction domain BKD09_RS41135 PF05830 Nodulation protein Z (NodZ) BKD09_RS41140 PF16861 Carbamoyltransferase C-terminus BKD09_RS41140 PF02543 Carbamoyltransferase N-terminus BKD09_RS41145 PF02543 Carbamoyltransferase N-terminus BKD09_RS41145 PF16861 Carbamoyltransferase C-terminus BKD09_RS41155 PF01061 ABC-2 type transporter BKD09_RS41160 PF00005 ABC transporter BKD09_RS41165 PF16861 Carbamoyltransferase C-terminus BKD09_RS41165 PF02543 Carbamoyltransferase N-terminus BKD09_RS41170 PF05401 Nodulation protein S (NodS) BKD09_RS41175 PF00535 Glycosyl transferase family 2 BKD09_RS41180 PF01522 Polysaccharide deacetylase BKD09_RS41185 PF02474 Nodulation protein A (NodA) BKD09_RS41195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS41195 PF03466 LysR substrate binding domain BKD09_RS41205 PF03466 LysR substrate binding domain BKD09_RS41205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS41215 PF13411 MerR HTH family regulatory protein BKD09_RS41225 PF13458 Periplasmic binding protein BKD09_RS41260 PF01925 Sulfite exporter TauE/SafE BKD09_RS41265 PF04055 Radical SAM superfamily BKD09_RS41310 PF00295 Glycosyl hydrolases family 28 BKD09_RS41345 PF07804 HipA-like C-terminal domain BKD09_RS41345 PF13657 HipA N-terminal domain BKD09_RS41390 PF05598 Transposase domain (DUF772) BKD09_RS41435 PF03968 OstA-like protein BKD09_RS41435 PF04453 LPS transport system D BKD09_RS41475 PF00583 Acetyltransferase (GNAT) family BKD09_RS41485 PF14496 C-terminal novel E3 ligase, LRR-interacting BKD09_RS41560 PF01548 Transposase BKD09_RS41560 PF02371 Transposase IS116/IS110/IS902 family BKD09_RS41565 PF07690 Major Facilitator Superfamily BKD09_RS41575 PF00313 'Cold-shock' DNA-binding domain BKD09_RS41580 PF00326 Prolyl oligopeptidase family BKD09_RS41580 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BKD09_RS41610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS41610 PF03466 LysR substrate binding domain BKD09_RS41640 PF13458 Periplasmic binding protein BKD09_RS41645 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS41650 PF11862 Domain of unknown function (DUF3382) BKD09_RS41650 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS41655 PF00005 ABC transporter BKD09_RS41655 PF12399 Branched-chain amino acid ATP-binding cassette transporter BKD09_RS41660 PF12399 Branched-chain amino acid ATP-binding cassette transporter BKD09_RS41660 PF00005 ABC transporter BKD09_RS41665 PF07690 Major Facilitator Superfamily BKD09_RS41680 PF02515 CoA-transferase family III BKD09_RS41695 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BKD09_RS41695 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BKD09_RS41700 PF00171 Aldehyde dehydrogenase family BKD09_RS41705 PF04963 Sigma-54 factor, core binding domain BKD09_RS41705 PF00309 Sigma-54 factor, Activator interacting domain (AID) BKD09_RS41705 PF04552 Sigma-54, DNA binding domain BKD09_RS41710 PF00313 'Cold-shock' DNA-binding domain BKD09_RS41715 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS41715 PF03472 Autoinducer binding domain BKD09_RS41740 PF00664 ABC transporter transmembrane region BKD09_RS41740 PF00005 ABC transporter BKD09_RS41750 PF00578 AhpC/TSA family BKD09_RS41770 PF00733 Asparagine synthase BKD09_RS41770 PF13537 Glutamine amidotransferase domain BKD09_RS41795 PF00155 Aminotransferase class I and II BKD09_RS41805 PF00202 Aminotransferase class-III BKD09_RS41820 PF07929 Plasmid pRiA4b ORF-3-like protein BKD09_RS41855 PF01425 Amidase BKD09_RS41860 PF07687 Peptidase dimerisation domain BKD09_RS41860 PF01546 Peptidase family M20/M25/M40 BKD09_RS41880 PF13005 zinc-finger binding domain of transposase IS66 BKD09_RS41880 PF13817 IS66 C-terminal element BKD09_RS41880 PF03050 Transposase IS66 family BKD09_RS41880 PF13007 Transposase C of IS166 homeodomain BKD09_RS41885 PF05717 IS66 Orf2 like protein BKD09_RS41890 PF01527 Transposase BKD09_RS41895 PF00296 Luciferase-like monooxygenase BKD09_RS41905 PF00501 AMP-binding enzyme BKD09_RS41905 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS41930 PF05853 beta-keto acid cleavage enzyme BKD09_RS41945 PF02515 CoA-transferase family III BKD09_RS41975 PF05853 beta-keto acid cleavage enzyme BKD09_RS42005 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS42065 PF13817 IS66 C-terminal element BKD09_RS42065 PF13007 Transposase C of IS166 homeodomain BKD09_RS42065 PF03050 Transposase IS66 family BKD09_RS42065 PF13005 zinc-finger binding domain of transposase IS66 BKD09_RS42070 PF05717 IS66 Orf2 like protein BKD09_RS42080 PF01527 Transposase BKD09_RS42090 PF13683 Integrase core domain BKD09_RS42090 PF13276 HTH-like domain BKD09_RS42095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKD09_RS42095 PF00005 ABC transporter BKD09_RS42100 PF00005 ABC transporter BKD09_RS42100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKD09_RS42105 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS42105 PF12911 N-terminal TM domain of oligopeptide transport permease C BKD09_RS42110 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS42125 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS42135 PF08402 TOBE domain BKD09_RS42135 PF00005 ABC transporter BKD09_RS42170 PF02530 Porin subfamily BKD09_RS42185 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BKD09_RS42185 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BKD09_RS42195 PF00557 Metallopeptidase family M24 BKD09_RS42195 PF01321 Creatinase/Prolidase N-terminal domain BKD09_RS42220 PF08402 TOBE domain BKD09_RS42220 PF00005 ABC transporter BKD09_RS42225 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS42230 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS42245 PF00665 Integrase core domain BKD09_RS42250 PF01695 IstB-like ATP binding protein BKD09_RS42255 PF13007 Transposase C of IS166 homeodomain BKD09_RS42255 PF13005 zinc-finger binding domain of transposase IS66 BKD09_RS42255 PF13817 IS66 C-terminal element BKD09_RS42255 PF03050 Transposase IS66 family BKD09_RS42260 PF05717 IS66 Orf2 like protein BKD09_RS42265 PF01527 Transposase BKD09_RS42270 PF00557 Metallopeptidase family M24 BKD09_RS42270 PF01321 Creatinase/Prolidase N-terminal domain BKD09_RS42280 PF07687 Peptidase dimerisation domain BKD09_RS42280 PF01546 Peptidase family M20/M25/M40 BKD09_RS42295 PF00766 Electron transfer flavoprotein FAD-binding domain BKD09_RS42295 PF01012 Electron transfer flavoprotein domain BKD09_RS42300 PF01012 Electron transfer flavoprotein domain BKD09_RS42305 PF01842 ACT domain BKD09_RS42305 PF00551 Formyl transferase BKD09_RS42310 PF08669 Glycine cleavage T-protein C-terminal barrel domain BKD09_RS42310 PF16350 FAD dependent oxidoreductase central domain BKD09_RS42310 PF01266 FAD dependent oxidoreductase BKD09_RS42310 PF01571 Aminomethyltransferase folate-binding domain BKD09_RS42315 PF00180 Isocitrate/isopropylmalate dehydrogenase BKD09_RS42320 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BKD09_RS42320 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BKD09_RS42335 PF00289 Biotin carboxylase, N-terminal domain BKD09_RS42335 PF00364 Biotin-requiring enzyme BKD09_RS42335 PF00682 HMGL-like BKD09_RS42335 PF02436 Conserved carboxylase domain BKD09_RS42335 PF02785 Biotin carboxylase C-terminal domain BKD09_RS42335 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BKD09_RS42345 PF01546 Peptidase family M20/M25/M40 BKD09_RS42345 PF07687 Peptidase dimerisation domain BKD09_RS42355 PF01321 Creatinase/Prolidase N-terminal domain BKD09_RS42355 PF00557 Metallopeptidase family M24 BKD09_RS42365 PF02515 CoA-transferase family III BKD09_RS42370 PF07476 Methylaspartate ammonia-lyase C-terminus BKD09_RS42370 PF05034 Methylaspartate ammonia-lyase N-terminus BKD09_RS42375 PF00171 Aldehyde dehydrogenase family BKD09_RS42380 PF00202 Aminotransferase class-III BKD09_RS42385 PF01037 Lrp/AsnC ligand binding domain BKD09_RS42390 PF05977 Transmembrane secretion effector BKD09_RS42405 PF01522 Polysaccharide deacetylase BKD09_RS42405 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain BKD09_RS42410 PF01037 Lrp/AsnC ligand binding domain BKD09_RS42435 PF00202 Aminotransferase class-III BKD09_RS42440 PF04055 Radical SAM superfamily BKD09_RS42440 PF06463 Molybdenum Cofactor Synthesis C BKD09_RS42470 PF00550 Phosphopantetheine attachment site BKD09_RS42470 PF00501 AMP-binding enzyme BKD09_RS42470 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS42470 PF00668 Condensation domain BKD09_RS42470 PF07993 Male sterility protein BKD09_RS42505 PF03466 LysR substrate binding domain BKD09_RS42505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS42530 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BKD09_RS42540 PF05193 Peptidase M16 inactive domain BKD09_RS42545 PF05193 Peptidase M16 inactive domain BKD09_RS42545 PF00675 Insulinase (Peptidase family M16) BKD09_RS42550 PF00664 ABC transporter transmembrane region BKD09_RS42550 PF00005 ABC transporter BKD09_RS42555 PF00578 AhpC/TSA family BKD09_RS42570 PF03466 LysR substrate binding domain BKD09_RS42570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS42595 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BKD09_RS42625 PF00542 Ribosomal protein L7/L12 C-terminal domain BKD09_RS42625 PF16320 Ribosomal protein L7/L12 dimerisation domain BKD09_RS42735 PF00264 Common central domain of tyrosinase BKD09_RS42750 PF07732 Multicopper oxidase BKD09_RS42750 PF07731 Multicopper oxidase BKD09_RS42750 PF00394 Multicopper oxidase BKD09_RS42765 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BKD09_RS42765 PF13360 PQQ-like domain BKD09_RS42775 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKD09_RS42825 PF01381 Helix-turn-helix BKD09_RS42825 PF08671 Anti-repressor SinI BKD09_RS42840 PF01734 Patatin-like phospholipase BKD09_RS42915 PF01037 Lrp/AsnC ligand binding domain BKD09_RS42920 PF00890 FAD binding domain BKD09_RS42945 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKD09_RS42945 PF14759 Reductase C-terminal BKD09_RS42990 PF13657 HipA N-terminal domain BKD09_RS42990 PF07804 HipA-like C-terminal domain BKD09_RS43045 PF00089 Trypsin BKD09_RS43090 PF01548 Transposase BKD09_RS43090 PF02371 Transposase IS116/IS110/IS902 family BKD09_RS43095 PF13683 Integrase core domain BKD09_RS43095 PF13276 HTH-like domain BKD09_RS43100 PF01527 Transposase BKD09_RS43110 PF02543 Carbamoyltransferase N-terminus BKD09_RS43110 PF16861 Carbamoyltransferase C-terminus BKD09_RS43115 PF00155 Aminotransferase class I and II BKD09_RS43120 PF00156 Phosphoribosyl transferase domain BKD09_RS43135 PF00171 Aldehyde dehydrogenase family BKD09_RS43140 PF00701 Dihydrodipicolinate synthetase family BKD09_RS43150 PF02515 CoA-transferase family III BKD09_RS43155 PF00356 Bacterial regulatory proteins, lacI family BKD09_RS43165 PF00083 Sugar (and other) transporter BKD09_RS43175 PF00378 Enoyl-CoA hydratase/isomerase BKD09_RS43190 PF00005 ABC transporter BKD09_RS43195 PF12857 TOBE-like domain BKD09_RS43195 PF17850 CysA C-terminal regulatory domain BKD09_RS43195 PF00005 ABC transporter BKD09_RS43225 PF02887 Pyruvate kinase, alpha/beta domain BKD09_RS43225 PF00224 Pyruvate kinase, barrel domain BKD09_RS43230 PF00890 FAD binding domain BKD09_RS43235 PF09370 Phosphoenolpyruvate hydrolase-like BKD09_RS43255 PF02954 Bacterial regulatory protein, Fis family BKD09_RS43255 PF09370 Phosphoenolpyruvate hydrolase-like BKD09_RS43255 PF00158 Sigma-54 interaction domain BKD09_RS43260 PF00005 ABC transporter BKD09_RS43260 PF17912 MalK OB fold domain BKD09_RS43265 PF13344 Haloacid dehalogenase-like hydrolase BKD09_RS43275 PF00294 pfkB family carbohydrate kinase BKD09_RS43280 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS43285 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS43320 PF04552 Sigma-54, DNA binding domain BKD09_RS43320 PF00309 Sigma-54 factor, Activator interacting domain (AID) BKD09_RS43320 PF04963 Sigma-54 factor, core binding domain BKD09_RS43325 PF03472 Autoinducer binding domain BKD09_RS43325 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS43330 PF00226 DnaJ domain BKD09_RS43360 PF00665 Integrase core domain BKD09_RS43365 PF01695 IstB-like ATP binding protein BKD09_RS43395 PF07690 Major Facilitator Superfamily BKD09_RS43425 PF13340 Putative transposase of IS4/5 family (DUF4096) BKD09_RS43440 PF00067 Cytochrome P450 BKD09_RS43445 PF02569 Pantoate-beta-alanine ligase BKD09_RS43465 PF06903 VirK protein BKD09_RS43480 PF00072 Response regulator receiver domain BKD09_RS43480 PF00486 Transcriptional regulatory protein, C terminal BKD09_RS43485 PF00263 Bacterial type II and III secretion system protein BKD09_RS43485 PF04972 BON domain BKD09_RS43485 PF13629 Pilus formation protein N terminal region BKD09_RS43515 PF01695 IstB-like ATP binding protein BKD09_RS43520 PF00665 Integrase core domain BKD09_RS43525 PF05598 Transposase domain (DUF772) BKD09_RS43545 PF02371 Transposase IS116/IS110/IS902 family BKD09_RS43545 PF01548 Transposase BKD09_RS43560 PF01312 FlhB HrpN YscU SpaS Family BKD09_RS43565 PF01311 Bacterial export proteins, family 1 BKD09_RS43570 PF01313 Bacterial export proteins, family 3 BKD09_RS43575 PF00813 FliP family BKD09_RS43580 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BKD09_RS43590 PF18269 T3SS EscN ATPase C-terminal domain BKD09_RS43590 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BKD09_RS43590 PF02874 ATP synthase alpha/beta family, beta-barrel domain BKD09_RS43595 PF06635 Nodulation protein NolV BKD09_RS43605 PF01514 Secretory protein of YscJ/FliF family BKD09_RS43665 PF00771 FHIPEP family BKD09_RS43680 PF05193 Peptidase M16 inactive domain BKD09_RS43680 PF00675 Insulinase (Peptidase family M16) BKD09_RS43705 PF14496 C-terminal novel E3 ligase, LRR-interacting BKD09_RS43720 PF00005 ABC transporter BKD09_RS43720 PF03459 TOBE domain BKD09_RS43725 PF00872 Transposase, Mutator family BKD09_RS43730 PF00578 AhpC/TSA family BKD09_RS43735 PF02627 Carboxymuconolactone decarboxylase family BKD09_RS43750 PF00766 Electron transfer flavoprotein FAD-binding domain BKD09_RS43750 PF01012 Electron transfer flavoprotein domain BKD09_RS43755 PF03206 Nitrogen fixation protein NifW BKD09_RS43760 PF04891 NifQ BKD09_RS43765 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family BKD09_RS43770 PF03960 ArsC family BKD09_RS43775 PF03922 OmpW family BKD09_RS43805 PF04319 NifZ domain BKD09_RS43810 PF02579 Dinitrogenase iron-molybdenum cofactor BKD09_RS43810 PF04055 Radical SAM superfamily BKD09_RS43815 PF06988 NifT/FixU protein BKD09_RS43820 PF00266 Aminotransferase class-V BKD09_RS43825 PF01521 Iron-sulphur cluster biosynthesis BKD09_RS43845 PF13237 4Fe-4S dicluster domain BKD09_RS43850 PF05082 Rop-like BKD09_RS43855 PF03270 Protein of unknown function, DUF269 BKD09_RS43860 PF02579 Dinitrogenase iron-molybdenum cofactor BKD09_RS43865 PF00148 Nitrogenase component 1 type Oxidoreductase BKD09_RS43870 PF04324 BFD-like [2Fe-2S] binding domain BKD09_RS43870 PF00148 Nitrogenase component 1 type Oxidoreductase BKD09_RS43875 PF11844 Domain of unknown function (DUF3364) BKD09_RS43875 PF00148 Nitrogenase component 1 type Oxidoreductase BKD09_RS43880 PF00148 Nitrogenase component 1 type Oxidoreductase BKD09_RS43900 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BKD09_RS43900 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BKD09_RS43905 PF02769 AIR synthase related protein, C-terminal domain BKD09_RS43905 PF00586 AIR synthase related protein, N-terminal domain BKD09_RS43910 PF01924 Hydrogenase formation hypA family BKD09_RS43915 PF17788 HypF Kae1-like domain BKD09_RS43915 PF01300 Telomere recombination BKD09_RS43915 PF07503 HypF finger BKD09_RS43915 PF00708 Acylphosphatase BKD09_RS43915 PF17788 HypF Kae1-like domain BKD09_RS43915 PF00708 Acylphosphatase BKD09_RS43915 PF07503 HypF finger BKD09_RS43915 PF01300 Telomere recombination BKD09_RS43940 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA BKD09_RS43960 PF01455 HupF/HypC family BKD09_RS43970 PF01292 Prokaryotic cytochrome b561 BKD09_RS43975 PF00374 Nickel-dependent hydrogenase BKD09_RS43980 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal BKD09_RS43980 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BKD09_RS43995 PF00375 Sodium:dicarboxylate symporter family BKD09_RS44015 PF13493 Domain of unknown function (DUF4118) BKD09_RS44015 PF00989 PAS fold BKD09_RS44015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS44015 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS44015 PF13426 PAS domain BKD09_RS44015 PF08447 PAS fold BKD09_RS44020 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS44020 PF00072 Response regulator receiver domain BKD09_RS44025 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS44025 PF00072 Response regulator receiver domain BKD09_RS44030 PF00872 Transposase, Mutator family BKD09_RS44035 PF00665 Integrase core domain BKD09_RS44035 PF08281 Sigma-70, region 4 BKD09_RS44040 PF01695 IstB-like ATP binding protein BKD09_RS44065 PF00239 Resolvase, N terminal domain BKD09_RS44065 PF07508 Recombinase BKD09_RS44065 PF13408 Recombinase zinc beta ribbon domain BKD09_RS44080 PF02534 Type IV secretory system Conjugative DNA transfer BKD09_RS44120 PF05406 WGR domain BKD09_RS44135 PF01695 IstB-like ATP binding protein BKD09_RS44140 PF00665 Integrase core domain BKD09_RS44165 PF00202 Aminotransferase class-III BKD09_RS44205 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS44210 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS44225 PF14496 C-terminal novel E3 ligase, LRR-interacting BKD09_RS44250 PF00550 Phosphopantetheine attachment site BKD09_RS44250 PF00668 Condensation domain BKD09_RS44250 PF00501 AMP-binding enzyme BKD09_RS44250 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS44295 PF02463 RecF/RecN/SMC N terminal domain BKD09_RS44295 PF06470 SMC proteins Flexible Hinge Domain BKD09_RS44340 PF02371 Transposase IS116/IS110/IS902 family BKD09_RS44340 PF01548 Transposase BKD09_RS44390 PF00990 Diguanylate cyclase, GGDEF domain BKD09_RS44390 PF00563 EAL domain BKD09_RS44390 PF03707 Bacterial signalling protein N terminal repeat BKD09_RS44400 PF00665 Integrase core domain BKD09_RS44405 PF01695 IstB-like ATP binding protein BKD09_RS44475 PF01380 SIS domain BKD09_RS44480 PF16363 GDP-mannose 4,6 dehydratase BKD09_RS44485 PF01370 NAD dependent epimerase/dehydratase family BKD09_RS44490 PF00873 AcrB/AcrD/AcrF family BKD09_RS44530 PF03743 Bacterial conjugation TrbI-like protein BKD09_RS44560 PF18818 Metallopeptidase superfamily domain BKD09_RS44560 PF08401 Domain of unknown function (DUF1738) BKD09_RS44580 PF01548 Transposase BKD09_RS44580 PF02371 Transposase IS116/IS110/IS902 family BKD09_RS44615 PF00005 ABC transporter BKD09_RS44615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKD09_RS44620 PF12911 N-terminal TM domain of oligopeptide transport permease C BKD09_RS44620 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS44625 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS44630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKD09_RS44635 PF00296 Luciferase-like monooxygenase BKD09_RS44640 PF07729 FCD domain BKD09_RS44640 PF00392 Bacterial regulatory proteins, gntR family BKD09_RS44665 PF00011 Hsp20/alpha crystallin family BKD09_RS44685 PF04679 ATP dependent DNA ligase C terminal region BKD09_RS44685 PF01068 ATP dependent DNA ligase domain BKD09_RS44685 PF13298 DNA polymerase Ligase (LigD) BKD09_RS44700 PF02735 Ku70/Ku80 beta-barrel domain BKD09_RS44725 PF01648 4'-phosphopantetheinyl transferase superfamily BKD09_RS44830 PF10518 TAT (twin-arginine translocation) pathway signal sequence BKD09_RS44830 PF00149 Calcineurin-like phosphoesterase BKD09_RS44835 PF17864 RuvB AAA lid domain BKD09_RS44835 PF05496 Holliday junction DNA helicase RuvB P-loop domain BKD09_RS44835 PF05491 RuvB C-terminal winged helix domain BKD09_RS44845 PF07499 RuvA, C-terminal domain BKD09_RS44845 PF01330 RuvA N terminal domain BKD09_RS44850 PF02075 Crossover junction endodeoxyribonuclease RuvC BKD09_RS44855 PF01709 Transcriptional regulator BKD09_RS44860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BKD09_RS44860 PF17200 Single Cache domain 2 BKD09_RS44860 PF00672 HAMP domain BKD09_RS44865 PF00672 HAMP domain BKD09_RS44865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BKD09_RS44870 PF00111 2Fe-2S iron-sulfur cluster binding domain BKD09_RS44870 PF01799 [2Fe-2S] binding domain BKD09_RS44875 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BKD09_RS44880 PF00034 Cytochrome c BKD09_RS44880 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BKD09_RS44890 PF02492 CobW/HypB/UreG, nucleotide-binding domain BKD09_RS44890 PF07683 Cobalamin synthesis protein cobW C-terminal domain BKD09_RS44895 PF13277 YmdB-like protein BKD09_RS44920 PF00456 Transketolase, thiamine diphosphate binding domain BKD09_RS44920 PF02780 Transketolase, C-terminal domain BKD09_RS44920 PF02779 Transketolase, pyrimidine binding domain BKD09_RS44925 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BKD09_RS44925 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BKD09_RS44930 PF00162 Phosphoglycerate kinase BKD09_RS44935 PF01116 Fructose-bisphosphate aldolase class-II BKD09_RS44940 PF00274 Fructose-bisphosphate aldolase class-I BKD09_RS44955 PF00459 Inositol monophosphatase family BKD09_RS44960 PF00873 AcrB/AcrD/AcrF family BKD09_RS44965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BKD09_RS44965 PF00529 HlyD membrane-fusion protein of T1SS BKD09_RS44970 PF12951 Passenger-associated-transport-repeat BKD09_RS44990 PF00691 OmpA family BKD09_RS44990 PF13677 Membrane MotB of proton-channel complex MotA/MotB BKD09_RS45000 PF00664 ABC transporter transmembrane region BKD09_RS45000 PF00005 ABC transporter BKD09_RS45005 PF01197 Ribosomal protein L31 BKD09_RS45020 PF08264 Anticodon-binding domain of tRNA BKD09_RS45020 PF09334 tRNA synthetases class I (M) BKD09_RS45025 PF08659 KR domain BKD09_RS45025 PF00550 Phosphopantetheine attachment site BKD09_RS45025 PF14765 Polyketide synthase dehydratase BKD09_RS45025 PF02801 Beta-ketoacyl synthase, C-terminal domain BKD09_RS45025 PF16197 Ketoacyl-synthetase C-terminal extension BKD09_RS45025 PF00107 Zinc-binding dehydrogenase BKD09_RS45025 PF08240 Alcohol dehydrogenase GroES-like domain BKD09_RS45025 PF00698 Acyl transferase domain BKD09_RS45025 PF00109 Beta-ketoacyl synthase, N-terminal domain BKD09_RS45030 PF00563 EAL domain BKD09_RS45030 PF00990 Diguanylate cyclase, GGDEF domain BKD09_RS45030 PF03707 Bacterial signalling protein N terminal repeat BKD09_RS45045 PF00990 Diguanylate cyclase, GGDEF domain BKD09_RS45045 PF01590 GAF domain BKD09_RS45045 PF00360 Phytochrome region BKD09_RS45045 PF00563 EAL domain BKD09_RS45050 PF00483 Nucleotidyl transferase BKD09_RS45055 PF13406 Transglycosylase SLT domain BKD09_RS45065 PF05532 CsbD-like BKD09_RS45080 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BKD09_RS45085 PF02622 Uncharacterized ACR, COG1678 BKD09_RS45100 PF01925 Sulfite exporter TauE/SafE BKD09_RS45120 PF00005 ABC transporter BKD09_RS45120 PF12857 TOBE-like domain BKD09_RS45125 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS45130 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS45140 PF01507 Phosphoadenosine phosphosulfate reductase family BKD09_RS45150 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BKD09_RS45150 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BKD09_RS45160 PF10414 Sirohaem synthase dimerisation region BKD09_RS45160 PF14824 Sirohaem biosynthesis protein central BKD09_RS45160 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BKD09_RS45165 PF01507 Phosphoadenosine phosphosulfate reductase family BKD09_RS45170 PF00009 Elongation factor Tu GTP binding domain BKD09_RS45175 PF01274 Malate synthase BKD09_RS45180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BKD09_RS45180 PF08269 Cache domain BKD09_RS45190 PF01476 LysM domain BKD09_RS45190 PF17969 L,D-transpeptidase C-terminal domain BKD09_RS45190 PF03734 L,D-transpeptidase catalytic domain BKD09_RS45195 PF01594 AI-2E family transporter BKD09_RS45220 PF07536 HWE histidine kinase BKD09_RS45220 PF13426 PAS domain BKD09_RS45225 PF02492 CobW/HypB/UreG, nucleotide-binding domain BKD09_RS45230 PF01730 UreF BKD09_RS45235 PF05194 UreE urease accessory protein, C-terminal domain BKD09_RS45235 PF02814 UreE urease accessory protein, N-terminal domain BKD09_RS45245 PF00449 Urease alpha-subunit, N-terminal domain BKD09_RS45245 PF01979 Amidohydrolase family BKD09_RS45250 PF13291 ACT domain BKD09_RS45250 PF02824 TGS domain BKD09_RS45250 PF04607 Region found in RelA / SpoT proteins BKD09_RS45255 PF00699 Urease beta subunit BKD09_RS45260 PF00547 Urease, gamma subunit BKD09_RS45265 PF01774 UreD urease accessory protein BKD09_RS45270 PF00005 ABC transporter BKD09_RS45275 PF00005 ABC transporter BKD09_RS45275 PF12399 Branched-chain amino acid ATP-binding cassette transporter BKD09_RS45285 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS45295 PF00270 DEAD/DEAH box helicase BKD09_RS45295 PF00271 Helicase conserved C-terminal domain BKD09_RS45300 PF01176 Translation initiation factor 1A / IF-1 BKD09_RS45305 PF00313 'Cold-shock' DNA-binding domain BKD09_RS45335 PF00263 Bacterial type II and III secretion system protein BKD09_RS45335 PF04972 BON domain BKD09_RS45335 PF13629 Pilus formation protein N terminal region BKD09_RS45350 PF00437 Type II/IV secretion system protein BKD09_RS45380 PF00883 Cytosol aminopeptidase family, catalytic domain BKD09_RS45380 PF02789 Cytosol aminopeptidase family, N-terminal domain BKD09_RS45385 PF00877 NlpC/P60 family BKD09_RS45390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKD09_RS45390 PF00005 ABC transporter BKD09_RS45395 PF12911 N-terminal TM domain of oligopeptide transport permease C BKD09_RS45395 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS45400 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS45405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKD09_RS45410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKD09_RS45415 PF00034 Cytochrome c BKD09_RS45420 PF02348 Cytidylyltransferase BKD09_RS45425 PF00800 Prephenate dehydratase BKD09_RS45425 PF01817 Chorismate mutase type II BKD09_RS45430 PF00296 Luciferase-like monooxygenase BKD09_RS45435 PF02219 Methylenetetrahydrofolate reductase BKD09_RS45440 PF02310 B12 binding domain BKD09_RS45440 PF02607 B12 binding domain BKD09_RS45440 PF02965 Vitamin B12 dependent methionine synthase, activation domain BKD09_RS45440 PF00809 Pterin binding enzyme BKD09_RS45440 PF02574 Homocysteine S-methyltransferase BKD09_RS45450 PF13417 Glutathione S-transferase, N-terminal domain BKD09_RS45475 PF01804 Penicillin amidase BKD09_RS45480 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BKD09_RS45480 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BKD09_RS45495 PF02770 Acyl-CoA dehydrogenase, middle domain BKD09_RS45495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BKD09_RS45495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BKD09_RS45500 PF02770 Acyl-CoA dehydrogenase, middle domain BKD09_RS45500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BKD09_RS45500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BKD09_RS45505 PF02803 Thiolase, C-terminal domain BKD09_RS45505 PF00108 Thiolase, N-terminal domain BKD09_RS45510 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS45510 PF00501 AMP-binding enzyme BKD09_RS45515 PF00378 Enoyl-CoA hydratase/isomerase BKD09_RS45515 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BKD09_RS45515 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BKD09_RS45520 PF09339 IclR helix-turn-helix domain BKD09_RS45525 PF12399 Branched-chain amino acid ATP-binding cassette transporter BKD09_RS45525 PF00005 ABC transporter BKD09_RS45530 PF00005 ABC transporter BKD09_RS45535 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS45540 PF11862 Domain of unknown function (DUF3382) BKD09_RS45540 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS45560 PF05161 MOFRL family BKD09_RS45560 PF13660 Domain of unknown function (DUF4147) BKD09_RS45575 PF00005 ABC transporter BKD09_RS45575 PF12399 Branched-chain amino acid ATP-binding cassette transporter BKD09_RS45580 PF00005 ABC transporter BKD09_RS45590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS45590 PF03466 LysR substrate binding domain BKD09_RS45600 PF01494 FAD binding domain BKD09_RS45615 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BKD09_RS45625 PF00378 Enoyl-CoA hydratase/isomerase BKD09_RS45630 PF07993 Male sterility protein BKD09_RS45630 PF00550 Phosphopantetheine attachment site BKD09_RS45630 PF00501 AMP-binding enzyme BKD09_RS45635 PF00106 short chain dehydrogenase BKD09_RS45650 PF17171 Glutathione S-transferase, C-terminal domain BKD09_RS45650 PF17172 Glutathione S-transferase N-terminal domain BKD09_RS45690 PF07885 Ion channel BKD09_RS45690 PF00027 Cyclic nucleotide-binding domain BKD09_RS45695 PF00378 Enoyl-CoA hydratase/isomerase BKD09_RS45705 PF13417 Glutathione S-transferase, N-terminal domain BKD09_RS45710 PF08279 HTH domain BKD09_RS45710 PF13280 WYL domain BKD09_RS45725 PF00561 alpha/beta hydrolase fold BKD09_RS45740 PF08240 Alcohol dehydrogenase GroES-like domain BKD09_RS45740 PF00107 Zinc-binding dehydrogenase BKD09_RS45745 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS45745 PF00501 AMP-binding enzyme BKD09_RS45750 PF07729 FCD domain BKD09_RS45750 PF00392 Bacterial regulatory proteins, gntR family BKD09_RS45760 PF02311 AraC-like ligand binding domain BKD09_RS45760 PF12833 Helix-turn-helix domain BKD09_RS45765 PF00501 AMP-binding enzyme BKD09_RS45765 PF13193 AMP-binding enzyme C-terminal domain BKD09_RS45770 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS45775 PF13407 Periplasmic binding protein domain BKD09_RS45780 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS45790 PF00005 ABC transporter BKD09_RS45805 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS45805 PF00072 Response regulator receiver domain BKD09_RS45820 PF00264 Common central domain of tyrosinase BKD09_RS45835 PF02153 Prephenate dehydrogenase BKD09_RS45835 PF01817 Chorismate mutase type II BKD09_RS45840 PF02492 CobW/HypB/UreG, nucleotide-binding domain BKD09_RS45845 PF01730 UreF BKD09_RS45850 PF00449 Urease alpha-subunit, N-terminal domain BKD09_RS45850 PF01979 Amidohydrolase family BKD09_RS45855 PF00699 Urease beta subunit BKD09_RS45860 PF04955 HupE / UreJ protein BKD09_RS45865 PF00547 Urease, gamma subunit BKD09_RS45870 PF01774 UreD urease accessory protein BKD09_RS45890 PF01425 Amidase BKD09_RS45895 PF00174 Oxidoreductase molybdopterin binding domain BKD09_RS45900 PF00970 Oxidoreductase FAD-binding domain BKD09_RS45900 PF00111 2Fe-2S iron-sulfur cluster binding domain BKD09_RS45900 PF00175 Oxidoreductase NAD-binding domain BKD09_RS45920 PF00106 short chain dehydrogenase BKD09_RS45925 PF14765 Polyketide synthase dehydratase BKD09_RS45925 PF08240 Alcohol dehydrogenase GroES-like domain BKD09_RS45925 PF00698 Acyl transferase domain BKD09_RS45925 PF00550 Phosphopantetheine attachment site BKD09_RS45925 PF08659 KR domain BKD09_RS45930 PF00561 alpha/beta hydrolase fold BKD09_RS45935 PF12833 Helix-turn-helix domain BKD09_RS45940 PF00072 Response regulator receiver domain BKD09_RS45940 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS45945 PF13426 PAS domain BKD09_RS45945 PF00989 PAS fold BKD09_RS45945 PF13493 Domain of unknown function (DUF4118) BKD09_RS45945 PF08447 PAS fold BKD09_RS45945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS45945 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS45960 PF07536 HWE histidine kinase BKD09_RS45960 PF13581 Histidine kinase-like ATPase domain BKD09_RS45960 PF13426 PAS domain BKD09_RS45970 PF10017 Histidine-specific methyltransferase, SAM-dependent BKD09_RS45980 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS45980 PF00072 Response regulator receiver domain BKD09_RS45990 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS45990 PF13426 PAS domain BKD09_RS45990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS45990 PF08447 PAS fold BKD09_RS45990 PF13493 Domain of unknown function (DUF4118) BKD09_RS45990 PF00989 PAS fold BKD09_RS46005 PF07883 Cupin domain BKD09_RS46005 PF12833 Helix-turn-helix domain BKD09_RS46025 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BKD09_RS46060 PF01022 Bacterial regulatory protein, arsR family BKD09_RS46070 PF02797 Chalcone and stilbene synthases, C-terminal domain BKD09_RS46070 PF00195 Chalcone and stilbene synthases, N-terminal domain BKD09_RS46075 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family BKD09_RS46080 PF07690 Major Facilitator Superfamily BKD09_RS46090 PF00171 Aldehyde dehydrogenase family BKD09_RS46095 PF05199 GMC oxidoreductase BKD09_RS46095 PF00732 GMC oxidoreductase BKD09_RS46115 PF08240 Alcohol dehydrogenase GroES-like domain BKD09_RS46115 PF00107 Zinc-binding dehydrogenase BKD09_RS46125 PF00753 Metallo-beta-lactamase superfamily BKD09_RS46130 PF01557 Fumarylacetoacetate (FAA) hydrolase family BKD09_RS46150 PF00561 alpha/beta hydrolase fold BKD09_RS46160 PF01425 Amidase BKD09_RS46170 PF08240 Alcohol dehydrogenase GroES-like domain BKD09_RS46170 PF00107 Zinc-binding dehydrogenase BKD09_RS46175 PF02770 Acyl-CoA dehydrogenase, middle domain BKD09_RS46175 PF18158 Adaptive response protein AidB N-terminal domain BKD09_RS46175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BKD09_RS46180 PF00106 short chain dehydrogenase BKD09_RS46185 PF00378 Enoyl-CoA hydratase/isomerase BKD09_RS46200 PF03466 LysR substrate binding domain BKD09_RS46200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS46205 PF07690 Major Facilitator Superfamily BKD09_RS46225 PF00994 Probable molybdopterin binding domain BKD09_RS46225 PF18146 Damage-inducible protein CinA KH domain BKD09_RS46225 PF02464 Competence-damaged protein BKD09_RS46250 PF01048 Phosphorylase superfamily BKD09_RS46250 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus BKD09_RS46255 PF00529 HlyD membrane-fusion protein of T1SS BKD09_RS46255 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BKD09_RS46260 PF00005 ABC transporter BKD09_RS46260 PF00664 ABC transporter transmembrane region BKD09_RS46270 PF00005 ABC transporter BKD09_RS46270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKD09_RS46275 PF01425 Amidase BKD09_RS46285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKD09_RS46285 PF00005 ABC transporter BKD09_RS46290 PF12911 N-terminal TM domain of oligopeptide transport permease C BKD09_RS46290 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS46295 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS46300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKD09_RS46305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKD09_RS46310 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS46330 PF12833 Helix-turn-helix domain BKD09_RS46330 PF12852 Cupin BKD09_RS46340 PF13458 Periplasmic binding protein BKD09_RS46345 PF00501 AMP-binding enzyme BKD09_RS46350 PF00005 ABC transporter BKD09_RS46355 PF12399 Branched-chain amino acid ATP-binding cassette transporter BKD09_RS46355 PF00005 ABC transporter BKD09_RS46365 PF02653 Branched-chain amino acid transport system / permease component BKD09_RS46370 PF00005 ABC transporter BKD09_RS46370 PF13732 Domain of unknown function (DUF4162) BKD09_RS46405 PF02073 Thermophilic metalloprotease (M29) BKD09_RS46410 PF00206 Lyase BKD09_RS46410 PF10397 Adenylosuccinate lyase C-terminus BKD09_RS46415 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS46425 PF07298 NnrU protein BKD09_RS46430 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS46440 PF12833 Helix-turn-helix domain BKD09_RS46460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKD09_RS46465 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS46470 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS46470 PF12911 N-terminal TM domain of oligopeptide transport permease C BKD09_RS46475 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKD09_RS46475 PF00005 ABC transporter BKD09_RS46515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BKD09_RS46515 PF08269 Cache domain BKD09_RS46525 PF01220 Dehydroquinase class II BKD09_RS46530 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BKD09_RS46535 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BKD09_RS46540 PF03480 Bacterial extracellular solute-binding protein, family 7 BKD09_RS46550 PF00155 Aminotransferase class I and II BKD09_RS46560 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS46560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS46560 PF00072 Response regulator receiver domain BKD09_RS46560 PF01627 Hpt domain BKD09_RS46560 PF00672 HAMP domain BKD09_RS46575 PF00561 alpha/beta hydrolase fold BKD09_RS46580 PF02566 OsmC-like protein BKD09_RS46585 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS46590 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS46590 PF00072 Response regulator receiver domain BKD09_RS46595 PF00083 Sugar (and other) transporter BKD09_RS46595 PF08946 Osmosensory transporter coiled coil BKD09_RS46600 PF01894 Uncharacterised protein family UPF0047 BKD09_RS46615 PF00119 ATP synthase A chain BKD09_RS46620 PF00137 ATP synthase subunit C BKD09_RS46625 PF00430 ATP synthase B/B' CF(0) BKD09_RS46630 PF00430 ATP synthase B/B' CF(0) BKD09_RS46640 PF13302 Acetyltransferase (GNAT) domain BKD09_RS46645 PF00675 Insulinase (Peptidase family M16) BKD09_RS46645 PF05193 Peptidase M16 inactive domain BKD09_RS46650 PF14821 Threonine synthase N terminus BKD09_RS46650 PF00291 Pyridoxal-phosphate dependent enzyme BKD09_RS46655 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS46655 PF00072 Response regulator receiver domain BKD09_RS46660 PF00672 HAMP domain BKD09_RS46660 PF07730 Histidine kinase BKD09_RS46660 PF16448 LapD/MoxY periplasmic domain BKD09_RS46670 PF02104 SURF1 family BKD09_RS46680 PF00510 Cytochrome c oxidase subunit III BKD09_RS46685 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 BKD09_RS46695 PF01040 UbiA prenyltransferase family BKD09_RS46700 PF00115 Cytochrome C and Quinol oxidase polypeptide I BKD09_RS46705 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BKD09_RS46705 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BKD09_RS46715 PF01523 Putative modulator of DNA gyrase BKD09_RS46720 PF10502 Signal peptidase, peptidase S26 BKD09_RS46735 PF03466 LysR substrate binding domain BKD09_RS46735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS46740 PF00892 EamA-like transporter family BKD09_RS46745 PF12706 Beta-lactamase superfamily domain BKD09_RS46755 PF01925 Sulfite exporter TauE/SafE BKD09_RS46765 PF13505 Outer membrane protein beta-barrel domain BKD09_RS46770 PF10400 Virulence activator alpha C-term BKD09_RS46770 PF03551 Transcriptional regulator PadR-like family BKD09_RS46780 PF12806 Acetyl-CoA dehydrogenase C-terminal like BKD09_RS46780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BKD09_RS46780 PF02770 Acyl-CoA dehydrogenase, middle domain BKD09_RS46780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BKD09_RS46785 PF00108 Thiolase, N-terminal domain BKD09_RS46785 PF02803 Thiolase, C-terminal domain BKD09_RS46790 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BKD09_RS46790 PF00378 Enoyl-CoA hydratase/isomerase BKD09_RS46790 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BKD09_RS46805 PF00043 Glutathione S-transferase, C-terminal domain BKD09_RS46805 PF02798 Glutathione S-transferase, N-terminal domain BKD09_RS46815 PF04107 Glutamate-cysteine ligase family 2(GCS2) BKD09_RS46830 PF00343 Carbohydrate phosphorylase BKD09_RS46840 PF01293 Phosphoenolpyruvate carboxykinase BKD09_RS46855 PF00072 Response regulator receiver domain BKD09_RS46855 PF00486 Transcriptional regulatory protein, C terminal BKD09_RS46860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS46860 PF00672 HAMP domain BKD09_RS46860 PF13756 Stimulus-sensing domain BKD09_RS46860 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS46860 PF13755 Sensor N-terminal transmembrane domain BKD09_RS46870 PF03830 PTS system sorbose subfamily IIB component BKD09_RS46870 PF03610 PTS system fructose IIA component BKD09_RS46875 PF00381 PTS HPr component phosphorylation site BKD09_RS46885 PF00009 Elongation factor Tu GTP binding domain BKD09_RS46885 PF06421 GTP-binding protein LepA C-terminus BKD09_RS46885 PF00679 Elongation factor G C-terminus BKD09_RS46885 PF03144 Elongation factor Tu domain 2 BKD09_RS46895 PF12697 Alpha/beta hydrolase family BKD09_RS46900 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS46960 PF00211 Adenylate and Guanylate cyclase catalytic domain BKD09_RS46965 PF00072 Response regulator receiver domain BKD09_RS46965 PF00486 Transcriptional regulatory protein, C terminal BKD09_RS46975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BKD09_RS46975 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BKD09_RS46980 PF08448 PAS fold BKD09_RS46980 PF08447 PAS fold BKD09_RS46980 PF00990 Diguanylate cyclase, GGDEF domain BKD09_RS46980 PF00563 EAL domain BKD09_RS46985 PF03411 Penicillin-insensitive murein endopeptidase BKD09_RS47000 PF00528 Binding-protein-dependent transport system inner membrane component BKD09_RS47005 PF00005 ABC transporter BKD09_RS47005 PF03459 TOBE domain BKD09_RS47010 PF03471 Transporter associated domain BKD09_RS47010 PF00999 Sodium/hydrogen exchanger family BKD09_RS47010 PF02080 TrkA-C domain BKD09_RS47015 PF12794 Mechanosensitive ion channel inner membrane domain 1 BKD09_RS47015 PF00924 Mechanosensitive ion channel BKD09_RS47015 PF12795 Mechanosensitive ion channel porin domain BKD09_RS47020 PF00557 Metallopeptidase family M24 BKD09_RS47025 PF00106 short chain dehydrogenase BKD09_RS47030 PF00440 Bacterial regulatory proteins, tetR family BKD09_RS47035 PF02805 Metal binding domain of Ada BKD09_RS47035 PF06029 AlkA N-terminal domain BKD09_RS47035 PF00730 HhH-GPD superfamily base excision DNA repair protein BKD09_RS47035 PF12833 Helix-turn-helix domain BKD09_RS47055 PF04002 RadC-like JAB domain BKD09_RS47060 PF13356 Arm DNA-binding domain BKD09_RS47060 PF00589 Phage integrase family BKD09_RS47065 PF17761 DUF1016 N-terminal domain BKD09_RS47065 PF06250 YhcG PDDEXK nuclease domain BKD09_RS47075 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system BKD09_RS47115 PF13340 Putative transposase of IS4/5 family (DUF4096) BKD09_RS47120 PF02371 Transposase IS116/IS110/IS902 family BKD09_RS47120 PF01548 Transposase BKD09_RS47135 PF03734 L,D-transpeptidase catalytic domain BKD09_RS47135 PF01476 LysM domain BKD09_RS47135 PF17969 L,D-transpeptidase C-terminal domain BKD09_RS47140 PF00106 short chain dehydrogenase BKD09_RS47145 PF00561 alpha/beta hydrolase fold BKD09_RS47165 PF05598 Transposase domain (DUF772) BKD09_RS47170 PF01381 Helix-turn-helix BKD09_RS47205 PF02899 Phage integrase, N-terminal SAM-like domain BKD09_RS47205 PF00589 Phage integrase family BKD09_RS47210 PF03050 Transposase IS66 family BKD09_RS47210 PF13817 IS66 C-terminal element BKD09_RS47210 PF13007 Transposase C of IS166 homeodomain BKD09_RS47210 PF13005 zinc-finger binding domain of transposase IS66 BKD09_RS47220 PF13505 Outer membrane protein beta-barrel domain BKD09_RS47225 PF13614 AAA domain BKD09_RS47235 PF01695 IstB-like ATP binding protein BKD09_RS47240 PF00665 Integrase core domain BKD09_RS47285 PF01494 FAD binding domain BKD09_RS47290 PF00171 Aldehyde dehydrogenase family BKD09_RS47315 PF00665 Integrase core domain BKD09_RS47320 PF01695 IstB-like ATP binding protein BKD09_RS47355 PF05598 Transposase domain (DUF772) BKD09_RS47365 PF07478 D-ala D-ala ligase C-terminus BKD09_RS47410 PF00665 Integrase core domain BKD09_RS47410 PF13333 Integrase core domain BKD09_RS47410 PF13276 HTH-like domain BKD09_RS47420 PF05717 IS66 Orf2 like protein BKD09_RS47440 PF05406 WGR domain BKD09_RS47500 PF00313 'Cold-shock' DNA-binding domain BKD09_RS47575 PF13276 HTH-like domain BKD09_RS47575 PF00665 Integrase core domain BKD09_RS47575 PF13333 Integrase core domain BKD09_RS47645 PF03466 LysR substrate binding domain BKD09_RS47645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD09_RS47655 PF00561 alpha/beta hydrolase fold BKD09_RS47665 PF03743 Bacterial conjugation TrbI-like protein BKD09_RS47675 PF04335 VirB8 protein BKD09_RS47695 PF03135 CagE, TrbE, VirB family, component of type IV transporter system BKD09_RS47705 PF04956 TrbC/VIRB2 family BKD09_RS47710 PF00437 Type II/IV secretion system protein BKD09_RS47730 PF00005 ABC transporter BKD09_RS47730 PF00664 ABC transporter transmembrane region BKD09_RS47760 PF02371 Transposase IS116/IS110/IS902 family BKD09_RS47760 PF01548 Transposase BKD09_RS47780 PF01548 Transposase BKD09_RS47780 PF02371 Transposase IS116/IS110/IS902 family BKD09_RS47795 PF04055 Radical SAM superfamily BKD09_RS47795 PF06969 HemN C-terminal domain BKD09_RS47805 PF00216 Bacterial DNA-binding protein BKD09_RS47810 PF05598 Transposase domain (DUF772) BKD09_RS47815 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BKD09_RS47825 PF00665 Integrase core domain BKD09_RS47850 PF13276 HTH-like domain BKD09_RS47850 PF00665 Integrase core domain BKD09_RS47935 PF01048 Phosphorylase superfamily BKD09_RS47940 PF04002 RadC-like JAB domain BKD09_RS47995 PF07015 VirC1 protein BKD09_RS48010 PF00468 Ribosomal protein L34 BKD09_RS48075 PF00565 Staphylococcal nuclease homologue BKD09_RS48090 PF00155 Aminotransferase class I and II BKD09_RS48110 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BKD09_RS48110 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BKD09_RS48150 PF10502 Signal peptidase, peptidase S26 BKD09_RS48250 PF04679 ATP dependent DNA ligase C terminal region BKD09_RS48250 PF01068 ATP dependent DNA ligase domain BKD09_RS48275 PF00248 Aldo/keto reductase family BKD09_RS48295 PF00430 ATP synthase B/B' CF(0) BKD09_RS48295 PF11154 Protein of unknown function (DUF2934) BKD09_RS48325 PF13545 Crp-like helix-turn-helix domain BKD09_RS48325 PF00027 Cyclic nucleotide-binding domain BKD09_RS48350 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BKD09_RS48360 PF08448 PAS fold BKD09_RS48360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD09_RS48360 PF13188 PAS domain BKD09_RS48360 PF00072 Response regulator receiver domain BKD09_RS48360 PF00512 His Kinase A (phospho-acceptor) domain BKD09_RS48405 PF11339 Protein of unknown function (DUF3141) BKD09_RS48440 PF01381 Helix-turn-helix BKD09_RS48475 PF04228 Putative neutral zinc metallopeptidase BKD09_RS48535 PF00145 C-5 cytosine-specific DNA methylase BKD09_RS48620 PF00924 Mechanosensitive ion channel BKD09_RS48620 PF05552 Conserved TM helix BKD09_RS48815 PF01850 PIN domain BKD09_RS48850 PF01471 Putative peptidoglycan binding domain BKD09_RS48850 PF03734 L,D-transpeptidase catalytic domain BKD09_RS48920 PF03781 Sulfatase-modifying factor enzyme 1 BKD09_RS49065 PF01053 Cys/Met metabolism PLP-dependent enzyme BKD09_RS49140 PF13458 Periplasmic binding protein BKD09_RS49145 PF03472 Autoinducer binding domain BKD09_RS49145 PF00196 Bacterial regulatory proteins, luxR family BKD09_RS49225 PF01548 Transposase BKD09_RS49225 PF02371 Transposase IS116/IS110/IS902 family BKD09_RS49290 PF05853 beta-keto acid cleavage enzyme BKD09_RS49330 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BKD09_RS49330 PF05221 S-adenosyl-L-homocysteine hydrolase BKD09_RS49335 PF13817 IS66 C-terminal element BKD09_RS49335 PF13005 zinc-finger binding domain of transposase IS66 BKD09_RS49335 PF03050 Transposase IS66 family BKD09_RS49335 PF13007 Transposase C of IS166 homeodomain BKD09_RS49350 PF02548 Ketopantoate hydroxymethyltransferase BKD09_RS49355 PF13276 HTH-like domain BKD09_RS49355 PF13683 Integrase core domain BKD09_RS49360 PF13276 HTH-like domain BKD09_RS49360 PF13683 Integrase core domain BKD09_RS49390 PF05717 IS66 Orf2 like protein BKD09_RS49405 PF13005 zinc-finger binding domain of transposase IS66 BKD09_RS49405 PF13007 Transposase C of IS166 homeodomain BKD09_RS49405 PF03050 Transposase IS66 family BKD09_RS49405 PF13817 IS66 C-terminal element BKD09_RS49410 PF13007 Transposase C of IS166 homeodomain BKD09_RS49410 PF13005 zinc-finger binding domain of transposase IS66 BKD09_RS49460 PF00224 Pyruvate kinase, barrel domain BKD09_RS49460 PF02887 Pyruvate kinase, alpha/beta domain BKD09_RS49505 PF02887 Pyruvate kinase, alpha/beta domain BKD09_RS49505 PF00224 Pyruvate kinase, barrel domain BKD09_RS49510 PF00224 Pyruvate kinase, barrel domain BKD09_RS49510 PF02887 Pyruvate kinase, alpha/beta domain BKD09_RS49535 PF03050 Transposase IS66 family BKD09_RS49535 PF13007 Transposase C of IS166 homeodomain BKD09_RS49535 PF13005 zinc-finger binding domain of transposase IS66 BKD09_RS49535 PF13817 IS66 C-terminal element BKD09_RS49540 PF05717 IS66 Orf2 like protein BKD09_RS49575 PF09476 Pilus biogenesis CpaD protein (pilus_cpaD) BKD09_RS49630 PF14496 C-terminal novel E3 ligase, LRR-interacting BKD09_RS49660 PF00037 4Fe-4S binding domain BKD09_RS49670 PF12838 4Fe-4S dicluster domain BKD09_RS49685 PF03050 Transposase IS66 family BKD09_RS49685 PF13005 zinc-finger binding domain of transposase IS66 BKD09_RS49685 PF13007 Transposase C of IS166 homeodomain BKD09_RS49685 PF13817 IS66 C-terminal element BKD09_RS49775 PF00872 Transposase, Mutator family BKD09_RS49780 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB BKD09_RS49790 PF02548 Ketopantoate hydroxymethyltransferase BKD09_RS49835 PF02371 Transposase IS116/IS110/IS902 family BKD09_RS49835 PF01548 Transposase BKD09_RS49850 PF13476 AAA domain BKD09_RS49855 PF06736 Protein of unknown function (DUF1211) BKD09_RS49895 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BKD09_RS49895 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BKD09_RS49925 PF00665 Integrase core domain BKD09_RS49930 PF13817 IS66 C-terminal element BKD09_RS49930 PF13007 Transposase C of IS166 homeodomain BKD09_RS49930 PF13005 zinc-finger binding domain of transposase IS66 BKD09_RS49930 PF03050 Transposase IS66 family BKD09_RS49980 PF07690 Major Facilitator Superfamily