BKD09_RS00115 SM00822 BKD09_RS00115 BKD09_RS00130 SM00857 Resolvase, N terminal domain BKD09_RS00170 SM00530 Helix-turn-helix XRE-family like proteins BKD09_RS00245 SM00530 Helix-turn-helix XRE-family like proteins BKD09_RS00270 SM00357 Cold shock protein domain BKD09_RS00300 SM00470 ParB-like nuclease domain BKD09_RS00320 SM00479 BKD09_RS00320 BKD09_RS00330 SM00530 Helix-turn-helix XRE-family like proteins BKD09_RS00420 SM00382 ATPases associated with a variety of cellular activities BKD09_RS00450 SM00382 ATPases associated with a variety of cellular activities BKD09_RS00455 SM01091 Transporter associated domain BKD09_RS00485 SM00062 Bacterial periplasmic substrate-binding proteins BKD09_RS00495 SM00829 Enoylreductase BKD09_RS00520 SM00347 helix_turn_helix multiple antibiotic resistance protein BKD09_RS00540 SM00382 ATPases associated with a variety of cellular activities BKD09_RS00560 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BKD09_RS00560 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS00560 SM01358 BKD09_RS00560 BKD09_RS00595 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS00685 SM00822 BKD09_RS00685 BKD09_RS00720 SM00318 Staphylococcal nuclease homologues BKD09_RS00765 SM00387 Histidine kinase-like ATPases BKD09_RS00770 SM00448 cheY-homologous receiver domain BKD09_RS00785 SM01058 CarD-like/TRCF domain BKD09_RS00795 SM00363 S4 RNA-binding domain BKD09_RS00800 SM00490 helicase superfamily c-terminal domain BKD09_RS00845 SM00864 Tubulin/FtsZ family, GTPase domain BKD09_RS00845 SM00865 Tubulin/FtsZ family, C-terminal domain BKD09_RS00885 SM00327 von Willebrand factor (vWF) type A domain BKD09_RS00915 SM00911 HWE histidine kinase BKD09_RS00920 SM00271 DnaJ molecular chaperone homology domain BKD09_RS00935 SM00116 Domain in cystathionine beta-synthase and other proteins. BKD09_RS00935 SM01091 Transporter associated domain BKD09_RS00970 SM00382 ATPases associated with a variety of cellular activities BKD09_RS00975 SM00382 ATPases associated with a variety of cellular activities BKD09_RS01005 SM00347 helix_turn_helix multiple antibiotic resistance protein BKD09_RS01010 SM00957 SecA DEAD-like domain BKD09_RS01010 SM00958 SecA preprotein cross-linking domain BKD09_RS01060 SM00465 GIY-YIG type nucleases (URI domain) BKD09_RS01080 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BKD09_RS01085 SM00937 BKD09_RS01085 BKD09_RS01090 SM00347 helix_turn_helix multiple antibiotic resistance protein BKD09_RS01110 SM00382 ATPases associated with a variety of cellular activities BKD09_RS01115 SM00382 ATPases associated with a variety of cellular activities BKD09_RS01145 SM00849 Metallo-beta-lactamase superfamily BKD09_RS01160 SM00822 BKD09_RS01160 BKD09_RS01215 SM00344 helix_turn_helix ASNC type BKD09_RS01225 SM00341 Helicase and RNase D C-terminal BKD09_RS01225 SM00487 DEAD-like helicases superfamily BKD09_RS01225 SM00490 helicase superfamily c-terminal domain BKD09_RS01225 SM00956 BKD09_RS01225 BKD09_RS01345 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS01365 SM00487 DEAD-like helicases superfamily BKD09_RS01470 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BKD09_RS01470 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS01470 SM01358 BKD09_RS01470 BKD09_RS01475 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BKD09_RS01475 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS01475 SM01358 BKD09_RS01475 BKD09_RS01485 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BKD09_RS01490 SM01092 CO dehydrogenase flavoprotein C-terminal domain BKD09_RS01505 SM00344 helix_turn_helix ASNC type BKD09_RS01525 SM00849 Metallo-beta-lactamase superfamily BKD09_RS01540 SM00347 helix_turn_helix multiple antibiotic resistance protein BKD09_RS01550 SM00849 Metallo-beta-lactamase superfamily BKD09_RS01555 SM00028 Tetratricopeptide repeats BKD09_RS01575 SM00100 Cyclic nucleotide-monophosphate binding domain BKD09_RS01575 SM00419 helix_turn_helix, cAMP Regulatory protein BKD09_RS01585 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain BKD09_RS01585 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BKD09_RS01585 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS01600 SM00257 Lysin motif BKD09_RS01610 SM00052 Putative diguanylate phosphodiesterase BKD09_RS01610 SM00267 diguanylate cyclase BKD09_RS01690 SM00318 Staphylococcal nuclease homologues BKD09_RS01735 SM00382 ATPases associated with a variety of cellular activities BKD09_RS01745 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS01745 SM00895 BKD09_RS01745 BKD09_RS01755 SM00448 cheY-homologous receiver domain BKD09_RS01760 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BKD09_RS01760 SM00091 PAS domain BKD09_RS01760 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS01760 SM00387 Histidine kinase-like ATPases BKD09_RS01760 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS01760 SM00448 cheY-homologous receiver domain BKD09_RS01765 SM00421 helix_turn_helix, Lux Regulon BKD09_RS01765 SM00448 cheY-homologous receiver domain BKD09_RS01775 SM00448 cheY-homologous receiver domain BKD09_RS01785 SM00138 Methyltransferase, chemotaxis proteins BKD09_RS01790 SM00448 cheY-homologous receiver domain BKD09_RS01795 SM00260 Two component signalling adaptor domain BKD09_RS01800 SM00073 Histidine Phosphotransfer domain BKD09_RS01800 SM00260 Two component signalling adaptor domain BKD09_RS01800 SM00387 Histidine kinase-like ATPases BKD09_RS01800 SM00448 cheY-homologous receiver domain BKD09_RS01800 SM01231 BKD09_RS01800 BKD09_RS01835 SM00421 helix_turn_helix, Lux Regulon BKD09_RS01845 SM00052 Putative diguanylate phosphodiesterase BKD09_RS01855 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS01905 SM00382 ATPases associated with a variety of cellular activities BKD09_RS01915 SM01329 BKD09_RS01915 BKD09_RS02010 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BKD09_RS02040 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BKD09_RS02040 SM00245 tail specific protease BKD09_RS02070 SM00382 ATPases associated with a variety of cellular activities BKD09_RS02095 SM00487 DEAD-like helicases superfamily BKD09_RS02095 SM00490 helicase superfamily c-terminal domain BKD09_RS02135 SM00861 Transketolase, pyrimidine binding domain BKD09_RS02140 SM00881 CoA binding domain BKD09_RS02175 SM00382 ATPases associated with a variety of cellular activities BKD09_RS02215 SM00382 ATPases associated with a variety of cellular activities BKD09_RS02245 SM00382 ATPases associated with a variety of cellular activities BKD09_RS02245 SM00962 SRP54-type protein, GTPase domain BKD09_RS02245 SM00963 SRP54-type protein, helical bundle domain BKD09_RS02260 SM00729 Elongator protein 3, MiaB family, Radical SAM BKD09_RS02270 SM00871 Bacterial transcription activator, effector binding domain BKD09_RS02285 SM00382 ATPases associated with a variety of cellular activities BKD09_RS02285 SM00962 SRP54-type protein, GTPase domain BKD09_RS02285 SM00963 SRP54-type protein, helical bundle domain BKD09_RS02345 SM00530 Helix-turn-helix XRE-family like proteins BKD09_RS02375 SM00100 Cyclic nucleotide-monophosphate binding domain BKD09_RS02375 SM00419 helix_turn_helix, cAMP Regulatory protein BKD09_RS02385 SM00947 Carbonic anhydrase BKD09_RS02390 SM00859 Semialdehyde dehydrogenase, NAD binding domain BKD09_RS02410 SM01329 BKD09_RS02410 BKD09_RS02430 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. BKD09_RS02475 SM00387 Histidine kinase-like ATPases BKD09_RS02475 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS02475 SM00448 cheY-homologous receiver domain BKD09_RS02480 SM00382 ATPases associated with a variety of cellular activities BKD09_RS02520 SM00098 Alkaline phosphatase homologues BKD09_RS02530 SM00014 Acid phosphatase homologues BKD09_RS02540 SM00729 Elongator protein 3, MiaB family, Radical SAM BKD09_RS02555 SM00829 Enoylreductase BKD09_RS02590 SM00448 cheY-homologous receiver domain BKD09_RS02595 SM00419 helix_turn_helix, cAMP Regulatory protein BKD09_RS02645 SM01152 BKD09_RS02645 BKD09_RS02685 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain BKD09_RS02775 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain BKD09_RS02800 SM00318 Staphylococcal nuclease homologues BKD09_RS02820 SM00798 AICARFT/IMPCHase bienzyme BKD09_RS02820 SM00851 MGS-like domain BKD09_RS02890 SM00464 Found in ATP-dependent protease La (LON) BKD09_RS02935 SM00938 Nitrogen regulatory protein P-II BKD09_RS02945 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BKD09_RS02965 SM00938 Nitrogen regulatory protein P-II BKD09_RS02990 SM00382 ATPases associated with a variety of cellular activities BKD09_RS02990 SM00843 BKD09_RS02990 BKD09_RS03005 SM00100 Cyclic nucleotide-monophosphate binding domain BKD09_RS03010 SM00448 cheY-homologous receiver domain BKD09_RS03010 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS03030 SM00267 diguanylate cyclase BKD09_RS03030 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS03035 SM00267 diguanylate cyclase BKD09_RS03055 SM00470 ParB-like nuclease domain BKD09_RS03070 SM01228 BKD09_RS03070 BKD09_RS03080 SM00357 Cold shock protein domain BKD09_RS03080 SM00382 ATPases associated with a variety of cellular activities BKD09_RS03080 SM00959 Rho termination factor, N-terminal domain BKD09_RS03110 SM00479 BKD09_RS03110 BKD09_RS03120 SM00978 BKD09_RS03120 BKD09_RS03125 SM00925 MltA specific insert domain BKD09_RS03130 SM00463 Small MutS-related domain BKD09_RS03140 SM00382 ATPases associated with a variety of cellular activities BKD09_RS03140 SM01086 C-terminal, D2-small domain, of ClpB protein BKD09_RS03150 SM01006 Siderophore biosynthesis protein domain BKD09_RS03195 SM00091 PAS domain BKD09_RS03195 SM00387 Histidine kinase-like ATPases BKD09_RS03195 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS03195 SM00448 cheY-homologous receiver domain BKD09_RS03205 SM00382 ATPases associated with a variety of cellular activities BKD09_RS03215 SM00028 Tetratricopeptide repeats BKD09_RS03235 SM00858 BKD09_RS03235 BKD09_RS03260 SM00729 Elongator protein 3, MiaB family, Radical SAM BKD09_RS03300 SM00271 DnaJ molecular chaperone homology domain BKD09_RS03305 SM00650 Ribosomal RNA adenine dimethylases BKD09_RS03315 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BKD09_RS03330 SM00382 ATPases associated with a variety of cellular activities BKD09_RS03355 SM00855 Phosphoglycerate mutase family BKD09_RS03360 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS03370 SM00478 endonuclease III BKD09_RS03370 SM00525 BKD09_RS03370 BKD09_RS03400 SM00944 Pro-kumamolisin, activation domain BKD09_RS03410 SM00746 metallochaperone-like domain BKD09_RS03435 SM00873 B3/4 domain BKD09_RS03435 SM00874 tRNA synthetase B5 domain BKD09_RS03435 SM00896 Ferredoxin-fold anticodon binding domain BKD09_RS03535 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BKD09_RS03575 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BKD09_RS03575 SM00387 Histidine kinase-like ATPases BKD09_RS03575 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS03580 SM00448 cheY-homologous receiver domain BKD09_RS03595 SM00474 3'-5' exonuclease BKD09_RS03610 SM00382 ATPases associated with a variety of cellular activities BKD09_RS03630 SM00869 Autotransporter beta-domain BKD09_RS03635 SM00028 Tetratricopeptide repeats BKD09_RS03680 SM00382 ATPases associated with a variety of cellular activities BKD09_RS03710 SM00347 helix_turn_helix multiple antibiotic resistance protein BKD09_RS03740 SM00316 Ribosomal protein S1-like RNA-binding domain BKD09_RS03750 SM00411 bacterial (prokaryotic) histone like domain BKD09_RS03825 SM00091 PAS domain BKD09_RS03825 SM00387 Histidine kinase-like ATPases BKD09_RS03825 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS03850 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BKD09_RS03850 SM01232 BKD09_RS03850 BKD09_RS03870 SM00911 HWE histidine kinase BKD09_RS03915 SM00825 Beta-ketoacyl synthase BKD09_RS03955 SM00316 Ribosomal protein S1-like RNA-binding domain BKD09_RS03955 SM00322 K homology RNA-binding domain BKD09_RS03960 SM01387 BKD09_RS03960 BKD09_RS03985 SM00316 Ribosomal protein S1-like RNA-binding domain BKD09_RS03985 SM00322 K homology RNA-binding domain BKD09_RS04010 SM00530 Helix-turn-helix XRE-family like proteins BKD09_RS04020 SM00116 Domain in cystathionine beta-synthase and other proteins. BKD09_RS04020 SM01091 Transporter associated domain BKD09_RS04035 SM00729 Elongator protein 3, MiaB family, Radical SAM BKD09_RS04060 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BKD09_RS04060 SM00091 PAS domain BKD09_RS04060 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BKD09_RS04065 SM00932 Scaffold protein Nfu/NifU N terminal BKD09_RS04110 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS04125 SM00100 Cyclic nucleotide-monophosphate binding domain BKD09_RS04145 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS04165 SM00860 SMI1 / KNR4 family BKD09_RS04190 SM00387 Histidine kinase-like ATPases BKD09_RS04190 SM00433 TopoisomeraseII BKD09_RS04220 SM00480 DNA polymerase III beta subunit BKD09_RS04225 SM00382 ATPases associated with a variety of cellular activities BKD09_RS04225 SM00760 Bacterial dnaA protein helix-turn-helix domain BKD09_RS04275 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BKD09_RS04280 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BKD09_RS04310 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BKD09_RS04335 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BKD09_RS04410 SM00849 Metallo-beta-lactamase superfamily BKD09_RS04420 SM00267 diguanylate cyclase BKD09_RS04425 SM00052 Putative diguanylate phosphodiesterase BKD09_RS04425 SM00091 PAS domain BKD09_RS04425 SM00267 diguanylate cyclase BKD09_RS04440 SM00382 ATPases associated with a variety of cellular activities BKD09_RS04445 SM00382 ATPases associated with a variety of cellular activities BKD09_RS04455 SM00382 ATPases associated with a variety of cellular activities BKD09_RS04460 SM00052 Putative diguanylate phosphodiesterase BKD09_RS04460 SM00267 diguanylate cyclase BKD09_RS04465 SM00911 HWE histidine kinase BKD09_RS04510 SM00849 Metallo-beta-lactamase superfamily BKD09_RS04515 SM00642 Alpha-amylase domain BKD09_RS04525 SM00448 cheY-homologous receiver domain BKD09_RS04530 SM00387 Histidine kinase-like ATPases BKD09_RS04530 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS04535 SM00382 ATPases associated with a variety of cellular activities BKD09_RS04590 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BKD09_RS04595 SM00062 Bacterial periplasmic substrate-binding proteins BKD09_RS04605 SM00382 ATPases associated with a variety of cellular activities BKD09_RS04625 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BKD09_RS04625 SM00091 PAS domain BKD09_RS04625 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BKD09_RS04630 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BKD09_RS04630 SM00534 ATPase domain of DNA mismatch repair MUTS family BKD09_RS04655 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BKD09_RS04655 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS04660 SM00587 ZnF_C4 abd HLH domain containing kinases domain BKD09_RS04675 SM00347 helix_turn_helix multiple antibiotic resistance protein BKD09_RS04710 SM00646 BKD09_RS04710 BKD09_RS04770 SM00052 Putative diguanylate phosphodiesterase BKD09_RS04770 SM00267 diguanylate cyclase BKD09_RS04780 SM00347 helix_turn_helix multiple antibiotic resistance protein BKD09_RS04790 SM00052 Putative diguanylate phosphodiesterase BKD09_RS04790 SM00091 PAS domain BKD09_RS04790 SM00267 diguanylate cyclase BKD09_RS04830 SM00020 Trypsin-like serine protease BKD09_RS04840 SM00421 helix_turn_helix, Lux Regulon BKD09_RS04840 SM00448 cheY-homologous receiver domain BKD09_RS04845 SM00387 Histidine kinase-like ATPases BKD09_RS04845 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS04845 SM00448 cheY-homologous receiver domain BKD09_RS04870 SM00382 ATPases associated with a variety of cellular activities BKD09_RS04880 SM00834 Putative regulatory protein BKD09_RS04890 SM00869 Autotransporter beta-domain BKD09_RS04900 SM00881 CoA binding domain BKD09_RS04915 SM00327 von Willebrand factor (vWF) type A domain BKD09_RS04915 SM00609 Vault protein Inter-alpha-Trypsin domain BKD09_RS04920 SM00530 Helix-turn-helix XRE-family like proteins BKD09_RS04955 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS04970 SM00878 Biotin carboxylase C-terminal domain BKD09_RS04980 SM00382 ATPases associated with a variety of cellular activities BKD09_RS04985 SM00382 ATPases associated with a variety of cellular activities BKD09_RS05045 SM00382 ATPases associated with a variety of cellular activities BKD09_RS05065 SM00450 Rhodanese Homology Domain BKD09_RS05065 SM00849 Metallo-beta-lactamase superfamily BKD09_RS05145 SM00062 Bacterial periplasmic substrate-binding proteins BKD09_RS05180 SM00448 cheY-homologous receiver domain BKD09_RS05180 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS05185 SM00387 Histidine kinase-like ATPases BKD09_RS05185 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS05185 SM00448 cheY-homologous receiver domain BKD09_RS05190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS05190 SM00387 Histidine kinase-like ATPases BKD09_RS05225 SM00382 ATPases associated with a variety of cellular activities BKD09_RS05245 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS05245 SM00895 BKD09_RS05245 BKD09_RS05255 SM00347 helix_turn_helix multiple antibiotic resistance protein BKD09_RS05265 SM00347 helix_turn_helix multiple antibiotic resistance protein BKD09_RS05300 SM00382 ATPases associated with a variety of cellular activities BKD09_RS05305 SM00382 ATPases associated with a variety of cellular activities BKD09_RS05340 SM00421 helix_turn_helix, Lux Regulon BKD09_RS05365 SM00382 ATPases associated with a variety of cellular activities BKD09_RS05370 SM00382 ATPases associated with a variety of cellular activities BKD09_RS05375 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS05385 SM01230 BKD09_RS05385 BKD09_RS05395 SM00346 helix_turn_helix isocitrate lyase regulation BKD09_RS05420 SM00530 Helix-turn-helix XRE-family like proteins BKD09_RS05490 SM00387 Histidine kinase-like ATPases BKD09_RS05490 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS05510 SM00382 ATPases associated with a variety of cellular activities BKD09_RS05520 SM00448 cheY-homologous receiver domain BKD09_RS05520 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS05575 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BKD09_RS05575 SM00091 PAS domain BKD09_RS05605 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS05620 SM00112 Cadherin repeats. BKD09_RS05625 SM00530 Helix-turn-helix XRE-family like proteins BKD09_RS05640 SM00354 helix_turn _helix lactose operon repressor BKD09_RS05655 SM00382 ATPases associated with a variety of cellular activities BKD09_RS05715 SM00062 Bacterial periplasmic substrate-binding proteins BKD09_RS05725 SM01057 Eukaryotic-type carbonic anhydrase BKD09_RS05750 SM00849 Metallo-beta-lactamase superfamily BKD09_RS05770 SM00028 Tetratricopeptide repeats BKD09_RS05780 SM00487 DEAD-like helicases superfamily BKD09_RS05780 SM00490 helicase superfamily c-terminal domain BKD09_RS05815 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BKD09_RS05815 SM00474 3'-5' exonuclease BKD09_RS05815 SM00475 5'-3' exonuclease BKD09_RS05815 SM00482 DNA polymerase A domain BKD09_RS05825 SM00984 UDP binding domain BKD09_RS05830 SM00487 DEAD-like helicases superfamily BKD09_RS05830 SM00490 helicase superfamily c-terminal domain BKD09_RS05830 SM00847 Helicase associated domain (HA2) Add an annotation BKD09_RS05845 SM00344 helix_turn_helix ASNC type BKD09_RS05865 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BKD09_RS05870 SM00822 BKD09_RS05870 BKD09_RS05875 SM00382 ATPases associated with a variety of cellular activities BKD09_RS05885 SM00062 Bacterial periplasmic substrate-binding proteins BKD09_RS05890 SM01060 BKD09_RS05890 BKD09_RS05895 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BKD09_RS05900 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS05910 SM00382 ATPases associated with a variety of cellular activities BKD09_RS06010 SM00387 Histidine kinase-like ATPases BKD09_RS06030 SM00116 Domain in cystathionine beta-synthase and other proteins. BKD09_RS06090 SM00903 Flavin reductase like domain BKD09_RS06095 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS06125 SM00729 Elongator protein 3, MiaB family, Radical SAM BKD09_RS06135 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS06135 SM00895 BKD09_RS06135 BKD09_RS06145 SM01130 BKD09_RS06145 BKD09_RS06165 SM00450 Rhodanese Homology Domain BKD09_RS06205 SM00347 helix_turn_helix multiple antibiotic resistance protein BKD09_RS06215 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BKD09_RS06215 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS06220 SM01130 BKD09_RS06220 BKD09_RS06250 SM00382 ATPases associated with a variety of cellular activities BKD09_RS06270 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS06270 SM00866 BKD09_RS06270 BKD09_RS06295 SM00382 ATPases associated with a variety of cellular activities BKD09_RS06300 SM00382 ATPases associated with a variety of cellular activities BKD09_RS06310 SM00072 Guanylate kinase homologues. BKD09_RS06330 SM00062 Bacterial periplasmic substrate-binding proteins BKD09_RS06345 SM00346 helix_turn_helix isocitrate lyase regulation BKD09_RS06355 SM00903 Flavin reductase like domain BKD09_RS06415 SM00100 Cyclic nucleotide-monophosphate binding domain BKD09_RS06440 SM00100 Cyclic nucleotide-monophosphate binding domain BKD09_RS06490 SM00226 Low molecular weight phosphatase family BKD09_RS06530 SM00387 Histidine kinase-like ATPases BKD09_RS06530 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS06530 SM00448 cheY-homologous receiver domain BKD09_RS06635 SM00028 Tetratricopeptide repeats BKD09_RS06640 SM00028 Tetratricopeptide repeats BKD09_RS06700 SM00382 ATPases associated with a variety of cellular activities BKD09_RS06795 SM00387 Histidine kinase-like ATPases BKD09_RS06800 SM00421 helix_turn_helix, Lux Regulon BKD09_RS06800 SM00448 cheY-homologous receiver domain BKD09_RS06820 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS06895 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BKD09_RS06920 SM00382 ATPases associated with a variety of cellular activities BKD09_RS06925 SM00382 ATPases associated with a variety of cellular activities BKD09_RS06935 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS06940 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BKD09_RS06940 SM00091 PAS domain BKD09_RS06940 SM00267 diguanylate cyclase BKD09_RS06975 SM00507 HNH nucleases BKD09_RS07015 SM00478 endonuclease III BKD09_RS07025 SM00387 Histidine kinase-like ATPases BKD09_RS07025 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS07025 SM00448 cheY-homologous receiver domain BKD09_RS07045 SM00893 Electron transfer flavoprotein domain BKD09_RS07050 SM00893 Electron transfer flavoprotein domain BKD09_RS07105 SM00448 cheY-homologous receiver domain BKD09_RS07115 SM00382 ATPases associated with a variety of cellular activities BKD09_RS07130 SM00563 Phosphate acyltransferases BKD09_RS07155 SM00830 Chorismate mutase type II BKD09_RS07185 SM00382 ATPases associated with a variety of cellular activities BKD09_RS07185 SM01086 C-terminal, D2-small domain, of ClpB protein BKD09_RS07265 SM00858 BKD09_RS07265 BKD09_RS07275 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS07275 SM00895 BKD09_RS07275 BKD09_RS07370 SM00448 cheY-homologous receiver domain BKD09_RS07425 SM00857 Resolvase, N terminal domain BKD09_RS07470 SM00387 Histidine kinase-like ATPases BKD09_RS07505 SM00822 BKD09_RS07505 BKD09_RS07560 SM00382 ATPases associated with a variety of cellular activities BKD09_RS07575 SM00833 Cobalamin synthesis protein cobW C-terminal domain BKD09_RS07580 SM00320 WD40 repeats BKD09_RS07665 SM00244 prohibitin homologues BKD09_RS07690 SM00116 Domain in cystathionine beta-synthase and other proteins. BKD09_RS07735 SM00028 Tetratricopeptide repeats BKD09_RS07775 SM00448 cheY-homologous receiver domain BKD09_RS07825 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BKD09_RS07830 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain BKD09_RS07840 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS07870 SM00387 Histidine kinase-like ATPases BKD09_RS07870 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS07875 SM00448 cheY-homologous receiver domain BKD09_RS07875 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS07985 SM00062 Bacterial periplasmic substrate-binding proteins BKD09_RS08000 SM00382 ATPases associated with a variety of cellular activities BKD09_RS08040 SM00344 helix_turn_helix ASNC type BKD09_RS08060 SM00052 Putative diguanylate phosphodiesterase BKD09_RS08060 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BKD09_RS08060 SM00267 diguanylate cyclase BKD09_RS08120 SM00344 helix_turn_helix ASNC type BKD09_RS08150 SM01321 BKD09_RS08150 BKD09_RS08210 SM00028 Tetratricopeptide repeats BKD09_RS08270 SM00382 ATPases associated with a variety of cellular activities BKD09_RS08295 SM00883 Chaperonin 10 Kd subunit BKD09_RS08350 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS08450 SM01209 BKD09_RS08450 BKD09_RS08450 SM01210 BKD09_RS08450 BKD09_RS08465 SM00363 S4 RNA-binding domain BKD09_RS08475 SM00853 MutL C terminal dimerisation domain BKD09_RS08475 SM01340 BKD09_RS08475 BKD09_RS08540 SM00904 Riboflavin kinase BKD09_RS08545 SM00448 cheY-homologous receiver domain BKD09_RS08555 SM00052 Putative diguanylate phosphodiesterase BKD09_RS08560 SM00028 Tetratricopeptide repeats BKD09_RS08560 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS08600 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BKD09_RS08600 SM00465 GIY-YIG type nucleases (URI domain) BKD09_RS08610 SM00357 Cold shock protein domain BKD09_RS08645 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS08645 SM00387 Histidine kinase-like ATPases BKD09_RS08645 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS08650 SM00448 cheY-homologous receiver domain BKD09_RS08650 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS08655 SM00347 helix_turn_helix multiple antibiotic resistance protein BKD09_RS08700 SM00850 LytTr DNA-binding domain BKD09_RS08705 SM01092 CO dehydrogenase flavoprotein C-terminal domain BKD09_RS08715 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BKD09_RS08720 SM00382 ATPases associated with a variety of cellular activities BKD09_RS08750 SM01400 BKD09_RS08750 BKD09_RS08855 SM00487 DEAD-like helicases superfamily BKD09_RS08855 SM00490 helicase superfamily c-terminal domain BKD09_RS08920 SM00091 PAS domain BKD09_RS08945 SM00838 Elongation factor G C-terminus BKD09_RS08945 SM00889 Elongation factor G, domain IV BKD09_RS08950 SM00530 Helix-turn-helix XRE-family like proteins BKD09_RS09045 SM00091 PAS domain BKD09_RS09045 SM00387 Histidine kinase-like ATPases BKD09_RS09045 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS09095 SM01130 BKD09_RS09095 BKD09_RS09110 SM00344 helix_turn_helix ASNC type BKD09_RS09120 SM00851 MGS-like domain BKD09_RS09120 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BKD09_RS09130 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BKD09_RS09150 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BKD09_RS09175 SM00347 helix_turn_helix multiple antibiotic resistance protein BKD09_RS09190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS09190 SM00387 Histidine kinase-like ATPases BKD09_RS09190 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS09190 SM00448 cheY-homologous receiver domain BKD09_RS09205 SM00460 Transglutaminase/protease-like homologues BKD09_RS09230 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BKD09_RS09270 SM00400 zinc finger BKD09_RS09270 SM00493 BKD09_RS09270 BKD09_RS09295 SM00822 BKD09_RS09295 BKD09_RS09300 SM00448 cheY-homologous receiver domain BKD09_RS09310 SM00267 diguanylate cyclase BKD09_RS09315 SM00644 BKD09_RS09315 BKD09_RS09335 SM00363 S4 RNA-binding domain BKD09_RS09360 SM00028 Tetratricopeptide repeats BKD09_RS09370 SM00833 Cobalamin synthesis protein cobW C-terminal domain BKD09_RS09400 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BKD09_RS09400 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS09400 SM01049 BKD09_RS09400 BKD09_RS09405 SM00878 Biotin carboxylase C-terminal domain BKD09_RS09410 SM00382 ATPases associated with a variety of cellular activities BKD09_RS09415 SM00903 Flavin reductase like domain BKD09_RS09465 SM00316 Ribosomal protein S1-like RNA-binding domain BKD09_RS09465 SM00732 Likely ribonuclease with RNase H fold. BKD09_RS09475 SM00448 cheY-homologous receiver domain BKD09_RS09475 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS09480 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS09480 SM00387 Histidine kinase-like ATPases BKD09_RS09485 SM00421 helix_turn_helix, Lux Regulon BKD09_RS09490 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BKD09_RS09500 SM01130 BKD09_RS09500 BKD09_RS09505 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BKD09_RS09565 SM00344 helix_turn_helix ASNC type BKD09_RS09570 SM00357 Cold shock protein domain BKD09_RS09585 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain BKD09_RS09630 SM00347 helix_turn_helix multiple antibiotic resistance protein BKD09_RS09635 SM00822 BKD09_RS09635 BKD09_RS09860 SM00062 Bacterial periplasmic substrate-binding proteins BKD09_RS09870 SM00382 ATPases associated with a variety of cellular activities BKD09_RS09875 SM00062 Bacterial periplasmic substrate-binding proteins BKD09_RS09910 SM00382 ATPases associated with a variety of cellular activities BKD09_RS09955 SM00028 Tetratricopeptide repeats BKD09_RS09965 SM00382 ATPases associated with a variety of cellular activities BKD09_RS10030 SM00564 beta-propeller repeat BKD09_RS10040 SM00062 Bacterial periplasmic substrate-binding proteins BKD09_RS10105 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BKD09_RS10105 SM00091 PAS domain BKD09_RS10105 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BKD09_RS10145 SM00971 Serine acetyltransferase, N-terminal BKD09_RS10180 SM00052 Putative diguanylate phosphodiesterase BKD09_RS10180 SM00267 diguanylate cyclase BKD09_RS10205 SM00382 ATPases associated with a variety of cellular activities BKD09_RS10230 SM00028 Tetratricopeptide repeats BKD09_RS10230 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain BKD09_RS10235 SM00028 Tetratricopeptide repeats BKD09_RS10305 SM00382 ATPases associated with a variety of cellular activities BKD09_RS10305 SM00448 cheY-homologous receiver domain BKD09_RS10325 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BKD09_RS10325 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BKD09_RS10360 SM00028 Tetratricopeptide repeats BKD09_RS10380 SM01001 AIR carboxylase BKD09_RS10385 SM00267 diguanylate cyclase BKD09_RS10415 SM00052 Putative diguanylate phosphodiesterase BKD09_RS10415 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BKD09_RS10415 SM00091 PAS domain BKD09_RS10415 SM00267 diguanylate cyclase BKD09_RS10425 SM00382 ATPases associated with a variety of cellular activities BKD09_RS10475 SM00882 Coenzyme A transferase BKD09_RS10480 SM00882 Coenzyme A transferase BKD09_RS10505 SM00729 Elongator protein 3, MiaB family, Radical SAM BKD09_RS10515 SM00100 Cyclic nucleotide-monophosphate binding domain BKD09_RS10515 SM00419 helix_turn_helix, cAMP Regulatory protein BKD09_RS10525 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS10530 SM00421 helix_turn_helix, Lux Regulon BKD09_RS10530 SM00448 cheY-homologous receiver domain BKD09_RS10540 SM00382 ATPases associated with a variety of cellular activities BKD09_RS10595 SM00849 Metallo-beta-lactamase superfamily BKD09_RS10620 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BKD09_RS10620 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS10620 SM01049 BKD09_RS10620 BKD09_RS10645 SM00788 Adenylosuccinate synthetase BKD09_RS10700 SM00028 Tetratricopeptide repeats BKD09_RS10720 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BKD09_RS10735 SM00460 Transglutaminase/protease-like homologues BKD09_RS10750 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS10765 SM00421 helix_turn_helix, Lux Regulon BKD09_RS10800 SM00062 Bacterial periplasmic substrate-binding proteins BKD09_RS10805 SM00062 Bacterial periplasmic substrate-binding proteins BKD09_RS10820 SM00382 ATPases associated with a variety of cellular activities BKD09_RS10825 SM00903 Flavin reductase like domain BKD09_RS10840 SM00382 ATPases associated with a variety of cellular activities BKD09_RS10840 SM00448 cheY-homologous receiver domain BKD09_RS10910 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS10930 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS10975 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain BKD09_RS10975 SM00454 Sterile alpha motif. BKD09_RS11045 SM00382 ATPases associated with a variety of cellular activities BKD09_RS11110 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen BKD09_RS11120 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS11130 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS11135 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS11175 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS11220 SM00382 ATPases associated with a variety of cellular activities BKD09_RS11235 SM00421 helix_turn_helix, Lux Regulon BKD09_RS11235 SM00448 cheY-homologous receiver domain BKD09_RS11275 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS11275 SM00387 Histidine kinase-like ATPases BKD09_RS11275 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS11275 SM00448 cheY-homologous receiver domain BKD09_RS11305 SM00382 ATPases associated with a variety of cellular activities BKD09_RS11310 SM00382 ATPases associated with a variety of cellular activities BKD09_RS11315 SM01120 BKD09_RS11315 BKD09_RS11365 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS11385 SM01007 Class II Aldolase and Adducin N-terminal domain BKD09_RS11405 SM00382 ATPases associated with a variety of cellular activities BKD09_RS11425 SM00091 PAS domain BKD09_RS11425 SM00382 ATPases associated with a variety of cellular activities BKD09_RS11430 SM00829 Enoylreductase BKD09_RS11480 SM00382 ATPases associated with a variety of cellular activities BKD09_RS11525 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS11590 SM00382 ATPases associated with a variety of cellular activities BKD09_RS11595 SM00382 ATPases associated with a variety of cellular activities BKD09_RS11625 SM00347 helix_turn_helix multiple antibiotic resistance protein BKD09_RS11630 SM00382 ATPases associated with a variety of cellular activities BKD09_RS11695 SM00858 BKD09_RS11695 BKD09_RS11835 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS11845 SM00347 helix_turn_helix multiple antibiotic resistance protein BKD09_RS11885 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS11885 SM00895 BKD09_RS11885 BKD09_RS11905 SM00829 Enoylreductase BKD09_RS11925 SM00382 ATPases associated with a variety of cellular activities BKD09_RS11990 SM00382 ATPases associated with a variety of cellular activities BKD09_RS12000 SM00062 Bacterial periplasmic substrate-binding proteins BKD09_RS12035 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS12035 SM00895 BKD09_RS12035 BKD09_RS12070 SM00354 helix_turn _helix lactose operon repressor BKD09_RS12080 SM00346 helix_turn_helix isocitrate lyase regulation BKD09_RS12150 SM00062 Bacterial periplasmic substrate-binding proteins BKD09_RS12230 SM01130 BKD09_RS12230 BKD09_RS12275 SM00387 Histidine kinase-like ATPases BKD09_RS12275 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS12280 SM00448 cheY-homologous receiver domain BKD09_RS12280 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS12285 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen BKD09_RS12305 SM00642 Alpha-amylase domain BKD09_RS12310 SM00642 Alpha-amylase domain BKD09_RS12315 SM00642 Alpha-amylase domain BKD09_RS12320 SM00642 Alpha-amylase domain BKD09_RS12325 SM00642 Alpha-amylase domain BKD09_RS12330 SM00642 Alpha-amylase domain BKD09_RS12365 SM01350 BKD09_RS12365 BKD09_RS12380 SM00763 PrkA AAA domain BKD09_RS12410 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BKD09_RS12465 SM00729 Elongator protein 3, MiaB family, Radical SAM BKD09_RS12510 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BKD09_RS12550 SM00062 Bacterial periplasmic substrate-binding proteins BKD09_RS12590 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS12595 SM00091 PAS domain BKD09_RS12595 SM00387 Histidine kinase-like ATPases BKD09_RS12595 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS12595 SM00448 cheY-homologous receiver domain BKD09_RS12600 SM00530 Helix-turn-helix XRE-family like proteins BKD09_RS12630 SM00382 ATPases associated with a variety of cellular activities BKD09_RS12635 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS12645 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain BKD09_RS12645 SM00454 Sterile alpha motif. BKD09_RS12670 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BKD09_RS12675 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS12675 SM00871 Bacterial transcription activator, effector binding domain BKD09_RS12700 SM00382 ATPases associated with a variety of cellular activities BKD09_RS12715 SM00450 Rhodanese Homology Domain BKD09_RS12720 SM00450 Rhodanese Homology Domain BKD09_RS12745 SM00382 ATPases associated with a variety of cellular activities BKD09_RS12930 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS12930 SM00387 Histidine kinase-like ATPases BKD09_RS12930 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS12935 SM00448 cheY-homologous receiver domain BKD09_RS12935 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS12970 SM00382 ATPases associated with a variety of cellular activities BKD09_RS13005 SM00344 helix_turn_helix ASNC type BKD09_RS13110 SM00382 ATPases associated with a variety of cellular activities BKD09_RS13135 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS13170 SM00644 BKD09_RS13170 BKD09_RS13245 SM00842 Cell division protein FtsA BKD09_RS13250 SM00864 Tubulin/FtsZ family, GTPase domain BKD09_RS13250 SM00865 Tubulin/FtsZ family, C-terminal domain BKD09_RS13270 SM00292 breast cancer carboxy-terminal domain BKD09_RS13270 SM00532 Ligase N family BKD09_RS13340 SM00382 ATPases associated with a variety of cellular activities BKD09_RS13360 SM00347 helix_turn_helix multiple antibiotic resistance protein BKD09_RS13385 SM00257 Lysin motif BKD09_RS13390 SM01329 BKD09_RS13390 BKD09_RS13495 SM00382 ATPases associated with a variety of cellular activities BKD09_RS13520 SM00115 Caspase, interleukin-1 beta converting enzyme (ICE) homologues BKD09_RS13545 SM00052 Putative diguanylate phosphodiesterase BKD09_RS13545 SM00267 diguanylate cyclase BKD09_RS13545 SM01079 BKD09_RS13545 BKD09_RS13555 SM00052 Putative diguanylate phosphodiesterase BKD09_RS13555 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BKD09_RS13555 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BKD09_RS13555 SM00091 PAS domain BKD09_RS13555 SM00267 diguanylate cyclase BKD09_RS13565 SM00849 Metallo-beta-lactamase superfamily BKD09_RS13610 SM00822 BKD09_RS13610 BKD09_RS13635 SM00387 Histidine kinase-like ATPases BKD09_RS13635 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS13635 SM00448 cheY-homologous receiver domain BKD09_RS13640 SM00382 ATPases associated with a variety of cellular activities BKD09_RS13660 SM00899 BKD09_RS13660 BKD09_RS13730 SM00244 prohibitin homologues BKD09_RS13735 SM00244 prohibitin homologues BKD09_RS13745 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BKD09_RS13795 SM00822 BKD09_RS13795 BKD09_RS13820 SM00382 ATPases associated with a variety of cellular activities BKD09_RS13825 SM00382 ATPases associated with a variety of cellular activities BKD09_RS13860 SM00062 Bacterial periplasmic substrate-binding proteins BKD09_RS13875 SM00382 ATPases associated with a variety of cellular activities BKD09_RS13880 SM00382 ATPases associated with a variety of cellular activities BKD09_RS13910 SM00849 Metallo-beta-lactamase superfamily BKD09_RS13930 SM00919 Malic enzyme, NAD binding domain BKD09_RS13930 SM01274 BKD09_RS13930 BKD09_RS13945 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BKD09_RS14040 SM00062 Bacterial periplasmic substrate-binding proteins BKD09_RS14055 SM00382 ATPases associated with a variety of cellular activities BKD09_RS14070 SM00062 Bacterial periplasmic substrate-binding proteins BKD09_RS14110 SM00382 ATPases associated with a variety of cellular activities BKD09_RS14150 SM00917 LeuA allosteric (dimerisation) domain BKD09_RS14220 SM00382 ATPases associated with a variety of cellular activities BKD09_RS14245 SM00530 Helix-turn-helix XRE-family like proteins BKD09_RS14275 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen BKD09_RS14300 SM00470 ParB-like nuclease domain BKD09_RS14330 SM00530 Helix-turn-helix XRE-family like proteins BKD09_RS14460 SM00448 cheY-homologous receiver domain BKD09_RS14465 SM00448 cheY-homologous receiver domain BKD09_RS14520 SM00421 helix_turn_helix, Lux Regulon BKD09_RS14520 SM00448 cheY-homologous receiver domain BKD09_RS14540 SM00421 helix_turn_helix, Lux Regulon BKD09_RS14585 SM00421 helix_turn_helix, Lux Regulon BKD09_RS14585 SM00448 cheY-homologous receiver domain BKD09_RS14610 SM00911 HWE histidine kinase BKD09_RS14670 SM00387 Histidine kinase-like ATPases BKD09_RS14670 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS14695 SM00014 Acid phosphatase homologues BKD09_RS14705 SM00460 Transglutaminase/protease-like homologues BKD09_RS14935 SM00421 helix_turn_helix, Lux Regulon BKD09_RS15015 SM00357 Cold shock protein domain BKD09_RS15115 SM00421 helix_turn_helix, Lux Regulon BKD09_RS15150 SM00387 Histidine kinase-like ATPases BKD09_RS15150 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS15195 SM00448 cheY-homologous receiver domain BKD09_RS15220 SM00421 helix_turn_helix, Lux Regulon BKD09_RS15220 SM00448 cheY-homologous receiver domain BKD09_RS15225 SM00387 Histidine kinase-like ATPases BKD09_RS15225 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS15260 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain BKD09_RS15265 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BKD09_RS15270 SM01092 CO dehydrogenase flavoprotein C-terminal domain BKD09_RS15280 SM00382 ATPases associated with a variety of cellular activities BKD09_RS15280 SM01086 C-terminal, D2-small domain, of ClpB protein BKD09_RS15290 SM00100 Cyclic nucleotide-monophosphate binding domain BKD09_RS15320 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BKD09_RS15325 SM01092 CO dehydrogenase flavoprotein C-terminal domain BKD09_RS15345 SM01034 Sensors of blue-light using FAD BKD09_RS15355 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BKD09_RS15355 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BKD09_RS15355 SM00091 PAS domain BKD09_RS15355 SM00911 HWE histidine kinase BKD09_RS15360 SM00448 cheY-homologous receiver domain BKD09_RS15390 SM00271 DnaJ molecular chaperone homology domain BKD09_RS15410 SM00749 bacterial OsmY and nodulation domain BKD09_RS15425 SM00419 helix_turn_helix, cAMP Regulatory protein BKD09_RS15450 SM00829 Enoylreductase BKD09_RS15475 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS15505 SM00421 helix_turn_helix, Lux Regulon BKD09_RS15515 SM00829 Enoylreductase BKD09_RS15535 SM01034 Sensors of blue-light using FAD BKD09_RS15550 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS15560 SM00749 bacterial OsmY and nodulation domain BKD09_RS15585 SM00883 Chaperonin 10 Kd subunit BKD09_RS15600 SM00382 ATPases associated with a variety of cellular activities BKD09_RS15600 SM00464 Found in ATP-dependent protease La (LON) BKD09_RS15740 SM00448 cheY-homologous receiver domain BKD09_RS15760 SM00883 Chaperonin 10 Kd subunit BKD09_RS15795 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BKD09_RS15835 SM00448 cheY-homologous receiver domain BKD09_RS15840 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BKD09_RS15840 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BKD09_RS15840 SM00091 PAS domain BKD09_RS15840 SM00387 Histidine kinase-like ATPases BKD09_RS15935 SM00448 cheY-homologous receiver domain BKD09_RS15985 SM00448 cheY-homologous receiver domain BKD09_RS16020 SM00421 helix_turn_helix, Lux Regulon BKD09_RS16160 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain BKD09_RS16160 SM00454 Sterile alpha motif. BKD09_RS16175 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain BKD09_RS16185 SM00382 ATPases associated with a variety of cellular activities BKD09_RS16205 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS16270 SM00943 Bifunctional DNA primase/polymerase, N-terminal BKD09_RS16275 SM00091 PAS domain BKD09_RS16295 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BKD09_RS16295 SM00387 Histidine kinase-like ATPases BKD09_RS16485 SM00100 Cyclic nucleotide-monophosphate binding domain BKD09_RS16485 SM00419 helix_turn_helix, cAMP Regulatory protein BKD09_RS16640 SM00344 helix_turn_helix ASNC type BKD09_RS16650 SM00382 ATPases associated with a variety of cellular activities BKD09_RS16700 SM01119 BKD09_RS16700 BKD09_RS16715 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BKD09_RS16715 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BKD09_RS16760 SM00346 helix_turn_helix isocitrate lyase regulation BKD09_RS16770 SM00881 CoA binding domain BKD09_RS16805 SM00382 ATPases associated with a variety of cellular activities BKD09_RS16825 SM00822 BKD09_RS16825 BKD09_RS16910 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain BKD09_RS16930 SM00387 Histidine kinase-like ATPases BKD09_RS16935 SM00421 helix_turn_helix, Lux Regulon BKD09_RS16935 SM00448 cheY-homologous receiver domain BKD09_RS17060 SM00387 Histidine kinase-like ATPases BKD09_RS17065 SM00421 helix_turn_helix, Lux Regulon BKD09_RS17065 SM00448 cheY-homologous receiver domain BKD09_RS17100 SM00354 helix_turn _helix lactose operon repressor BKD09_RS17165 SM00729 Elongator protein 3, MiaB family, Radical SAM BKD09_RS17210 SM00382 ATPases associated with a variety of cellular activities BKD09_RS17210 SM01086 C-terminal, D2-small domain, of ClpB protein BKD09_RS17265 SM00240 Forkhead associated domain BKD09_RS17290 SM00331 Sigma factor PP2C-like phosphatases BKD09_RS17290 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BKD09_RS17355 SM00421 helix_turn_helix, Lux Regulon BKD09_RS17365 SM00382 ATPases associated with a variety of cellular activities BKD09_RS17385 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BKD09_RS17430 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS17430 SM00895 BKD09_RS17430 BKD09_RS17445 SM00382 ATPases associated with a variety of cellular activities BKD09_RS17495 SM00100 Cyclic nucleotide-monophosphate binding domain BKD09_RS17495 SM00419 helix_turn_helix, cAMP Regulatory protein BKD09_RS17500 SM00421 helix_turn_helix, Lux Regulon BKD09_RS17500 SM00448 cheY-homologous receiver domain BKD09_RS17505 SM00448 cheY-homologous receiver domain BKD09_RS17580 SM00387 Histidine kinase-like ATPases BKD09_RS17580 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS17610 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS17615 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS17645 SM00028 Tetratricopeptide repeats BKD09_RS17645 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS17705 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS17720 SM00869 Autotransporter beta-domain BKD09_RS17770 SM00507 HNH nucleases BKD09_RS17785 SM00028 Tetratricopeptide repeats BKD09_RS17900 SM00100 Cyclic nucleotide-monophosphate binding domain BKD09_RS17905 SM00448 cheY-homologous receiver domain BKD09_RS17935 SM00382 ATPases associated with a variety of cellular activities BKD09_RS17945 SM00062 Bacterial periplasmic substrate-binding proteins BKD09_RS17950 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS17950 SM00866 BKD09_RS17950 BKD09_RS17980 SM01092 CO dehydrogenase flavoprotein C-terminal domain BKD09_RS17990 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BKD09_RS18010 SM00382 ATPases associated with a variety of cellular activities BKD09_RS18015 SM00382 ATPases associated with a variety of cellular activities BKD09_RS18090 SM00382 ATPases associated with a variety of cellular activities BKD09_RS18125 SM00421 helix_turn_helix, Lux Regulon BKD09_RS18130 SM00052 Putative diguanylate phosphodiesterase BKD09_RS18130 SM00267 diguanylate cyclase BKD09_RS18135 SM00849 Metallo-beta-lactamase superfamily BKD09_RS18195 SM00564 beta-propeller repeat BKD09_RS18205 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BKD09_RS18230 SM00564 beta-propeller repeat BKD09_RS18235 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS18255 SM00062 Bacterial periplasmic substrate-binding proteins BKD09_RS18265 SM00564 beta-propeller repeat BKD09_RS18300 SM00382 ATPases associated with a variety of cellular activities BKD09_RS18330 SM00849 Metallo-beta-lactamase superfamily BKD09_RS18335 SM00062 Bacterial periplasmic substrate-binding proteins BKD09_RS18360 SM00382 ATPases associated with a variety of cellular activities BKD09_RS18385 SM00421 helix_turn_helix, Lux Regulon BKD09_RS18385 SM00448 cheY-homologous receiver domain BKD09_RS18390 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS18390 SM00387 Histidine kinase-like ATPases BKD09_RS18440 SM00411 bacterial (prokaryotic) histone like domain BKD09_RS18445 SM00382 ATPases associated with a variety of cellular activities BKD09_RS18445 SM00464 Found in ATP-dependent protease La (LON) BKD09_RS18465 SM01007 Class II Aldolase and Adducin N-terminal domain BKD09_RS18530 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BKD09_RS18560 SM00382 ATPases associated with a variety of cellular activities BKD09_RS18575 SM00382 ATPases associated with a variety of cellular activities BKD09_RS18635 SM00382 ATPases associated with a variety of cellular activities BKD09_RS18645 SM00829 Enoylreductase BKD09_RS18705 SM00052 Putative diguanylate phosphodiesterase BKD09_RS18705 SM00091 PAS domain BKD09_RS18705 SM00267 diguanylate cyclase BKD09_RS18705 SM01080 BKD09_RS18705 BKD09_RS18855 SM00448 cheY-homologous receiver domain BKD09_RS18880 SM00903 Flavin reductase like domain BKD09_RS18900 SM00382 ATPases associated with a variety of cellular activities BKD09_RS18945 SM00822 BKD09_RS18945 BKD09_RS18970 SM00347 helix_turn_helix multiple antibiotic resistance protein BKD09_RS18985 SM00116 Domain in cystathionine beta-synthase and other proteins. BKD09_RS18990 SM00880 BKD09_RS18990 BKD09_RS19005 SM00881 CoA binding domain BKD09_RS19025 SM00382 ATPases associated with a variety of cellular activities BKD09_RS19035 SM00100 Cyclic nucleotide-monophosphate binding domain BKD09_RS19035 SM00419 helix_turn_helix, cAMP Regulatory protein BKD09_RS19040 SM00100 Cyclic nucleotide-monophosphate binding domain BKD09_RS19040 SM00419 helix_turn_helix, cAMP Regulatory protein BKD09_RS19075 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BKD09_RS19090 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BKD09_RS19220 SM00857 Resolvase, N terminal domain BKD09_RS19345 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS19345 SM00895 BKD09_RS19345 BKD09_RS19490 SM00116 Domain in cystathionine beta-synthase and other proteins. BKD09_RS19495 SM00235 Zinc-dependent metalloprotease BKD09_RS19595 SM00984 UDP binding domain BKD09_RS19600 SM00829 Enoylreductase BKD09_RS19640 SM00382 ATPases associated with a variety of cellular activities BKD09_RS19665 SM00382 ATPases associated with a variety of cellular activities BKD09_RS19670 SM00100 Cyclic nucleotide-monophosphate binding domain BKD09_RS19670 SM00419 helix_turn_helix, cAMP Regulatory protein BKD09_RS19680 SM00028 Tetratricopeptide repeats BKD09_RS19680 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain BKD09_RS19720 SM00382 ATPases associated with a variety of cellular activities BKD09_RS19725 SM00382 ATPases associated with a variety of cellular activities BKD09_RS19735 SM00028 Tetratricopeptide repeats BKD09_RS19735 SM00115 Caspase, interleukin-1 beta converting enzyme (ICE) homologues BKD09_RS19750 SM00996 S-adenosyl-L-homocysteine hydrolase BKD09_RS19750 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BKD09_RS19825 SM00382 ATPases associated with a variety of cellular activities BKD09_RS19920 SM00421 helix_turn_helix, Lux Regulon BKD09_RS19930 SM00829 Enoylreductase BKD09_RS19940 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BKD09_RS19965 SM00028 Tetratricopeptide repeats BKD09_RS19965 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS19970 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. BKD09_RS20030 SM00115 Caspase, interleukin-1 beta converting enzyme (ICE) homologues BKD09_RS20060 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BKD09_RS20070 SM00382 ATPases associated with a variety of cellular activities BKD09_RS20145 SM00387 Histidine kinase-like ATPases BKD09_RS20145 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS20150 SM00448 cheY-homologous receiver domain BKD09_RS20150 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS20165 SM00858 BKD09_RS20165 BKD09_RS20175 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BKD09_RS20180 SM01130 BKD09_RS20180 BKD09_RS20215 SM00052 Putative diguanylate phosphodiesterase BKD09_RS20215 SM00267 diguanylate cyclase BKD09_RS20235 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS20250 SM00855 Phosphoglycerate mutase family BKD09_RS20380 SM00858 BKD09_RS20380 BKD09_RS20430 SM00028 Tetratricopeptide repeats BKD09_RS20490 SM00091 PAS domain BKD09_RS20490 SM00387 Histidine kinase-like ATPases BKD09_RS20490 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS20490 SM00448 cheY-homologous receiver domain BKD09_RS20495 SM00978 BKD09_RS20495 BKD09_RS20505 SM00100 Cyclic nucleotide-monophosphate binding domain BKD09_RS20505 SM00419 helix_turn_helix, cAMP Regulatory protein BKD09_RS20510 SM00382 ATPases associated with a variety of cellular activities BKD09_RS20520 SM00062 Bacterial periplasmic substrate-binding proteins BKD09_RS20540 SM00421 helix_turn_helix, Lux Regulon BKD09_RS20605 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain BKD09_RS20630 SM00382 ATPases associated with a variety of cellular activities BKD09_RS20660 SM00346 helix_turn_helix isocitrate lyase regulation BKD09_RS20665 SM01012 BKD09_RS20665 BKD09_RS20700 SM00382 ATPases associated with a variety of cellular activities BKD09_RS20705 SM00382 ATPases associated with a variety of cellular activities BKD09_RS20720 SM00382 ATPases associated with a variety of cellular activities BKD09_RS20735 SM00420 helix_turn_helix, Deoxyribose operon repressor BKD09_RS20735 SM01134 BKD09_RS20735 BKD09_RS20740 SM01133 BKD09_RS20740 BKD09_RS20775 SM00382 ATPases associated with a variety of cellular activities BKD09_RS20780 SM00530 Helix-turn-helix XRE-family like proteins BKD09_RS20820 SM00564 beta-propeller repeat BKD09_RS20915 SM00382 ATPases associated with a variety of cellular activities BKD09_RS20940 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BKD09_RS20945 SM00100 Cyclic nucleotide-monophosphate binding domain BKD09_RS20955 SM01329 BKD09_RS20955 BKD09_RS20965 SM00028 Tetratricopeptide repeats BKD09_RS20970 SM00267 diguanylate cyclase BKD09_RS20980 SM00829 Enoylreductase BKD09_RS20990 SM01043 Bacterial transcriptional activator domain BKD09_RS20995 SM01116 BKD09_RS20995 BKD09_RS21020 SM01211 BKD09_RS21020 BKD09_RS21095 SM00506 Appr-1"-p processing enzyme BKD09_RS21115 SM00363 S4 RNA-binding domain BKD09_RS21115 SM01390 BKD09_RS21115 BKD09_RS21150 SM00100 Cyclic nucleotide-monophosphate binding domain BKD09_RS21180 SM00091 PAS domain BKD09_RS21180 SM00387 Histidine kinase-like ATPases BKD09_RS21180 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS21190 SM00998 Adenylosuccinate lyase C-terminus BKD09_RS21205 SM00849 Metallo-beta-lactamase superfamily BKD09_RS21215 SM00421 helix_turn_helix, Lux Regulon BKD09_RS21215 SM00448 cheY-homologous receiver domain BKD09_RS21220 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS21220 SM00387 Histidine kinase-like ATPases BKD09_RS21270 SM00054 EF-hand, calcium binding motif BKD09_RS21280 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BKD09_RS21280 SM00091 PAS domain BKD09_RS21280 SM00387 Histidine kinase-like ATPases BKD09_RS21280 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS21280 SM00448 cheY-homologous receiver domain BKD09_RS21285 SM00448 cheY-homologous receiver domain BKD09_RS21295 SM00382 ATPases associated with a variety of cellular activities BKD09_RS21300 SM00382 ATPases associated with a variety of cellular activities BKD09_RS21335 SM00998 Adenylosuccinate lyase C-terminus BKD09_RS21350 SM01092 CO dehydrogenase flavoprotein C-terminal domain BKD09_RS21355 SM00382 ATPases associated with a variety of cellular activities BKD09_RS21360 SM00327 von Willebrand factor (vWF) type A domain BKD09_RS21375 SM00852 Probable molybdopterin binding domain BKD09_RS21395 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BKD09_RS21410 SM00382 ATPases associated with a variety of cellular activities BKD09_RS21420 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain BKD09_RS21430 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS21430 SM00866 BKD09_RS21430 BKD09_RS21480 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain BKD09_RS21480 SM01080 BKD09_RS21480 BKD09_RS21520 SM00382 ATPases associated with a variety of cellular activities BKD09_RS21525 SM00382 ATPases associated with a variety of cellular activities BKD09_RS21530 SM00382 ATPases associated with a variety of cellular activities BKD09_RS21560 SM00465 GIY-YIG type nucleases (URI domain) BKD09_RS21575 SM00244 prohibitin homologues BKD09_RS21590 SM00883 Chaperonin 10 Kd subunit BKD09_RS21640 SM00460 Transglutaminase/protease-like homologues BKD09_RS21655 SM00852 Probable molybdopterin binding domain BKD09_RS21690 SM00829 Enoylreductase BKD09_RS21715 SM00382 ATPases associated with a variety of cellular activities BKD09_RS21805 SM00971 Serine acetyltransferase, N-terminal BKD09_RS21865 SM00382 ATPases associated with a variety of cellular activities BKD09_RS21870 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS21870 SM00895 BKD09_RS21870 BKD09_RS21885 SM00880 BKD09_RS21885 BKD09_RS21885 SM01118 BKD09_RS21885 BKD09_RS21960 SM00487 DEAD-like helicases superfamily BKD09_RS21960 SM00490 helicase superfamily c-terminal domain BKD09_RS21985 SM00100 Cyclic nucleotide-monophosphate binding domain BKD09_RS22005 SM00116 Domain in cystathionine beta-synthase and other proteins. BKD09_RS22035 SM00829 Enoylreductase BKD09_RS22060 SM01043 Bacterial transcriptional activator domain BKD09_RS22065 SM00052 Putative diguanylate phosphodiesterase BKD09_RS22065 SM00091 PAS domain BKD09_RS22065 SM00267 diguanylate cyclase BKD09_RS22080 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BKD09_RS22120 SM01234 BKD09_RS22120 BKD09_RS22160 SM00448 cheY-homologous receiver domain BKD09_RS22170 SM00530 Helix-turn-helix XRE-family like proteins BKD09_RS22240 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BKD09_RS22240 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS22255 SM00564 beta-propeller repeat BKD09_RS22305 SM00967 RNA 2'-O ribose methyltransferase substrate binding BKD09_RS22375 SM00387 Histidine kinase-like ATPases BKD09_RS22375 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS22375 SM00448 cheY-homologous receiver domain BKD09_RS22440 SM00382 ATPases associated with a variety of cellular activities BKD09_RS22510 SM00327 von Willebrand factor (vWF) type A domain BKD09_RS22645 SM00822 BKD09_RS22645 BKD09_RS22650 SM00855 Phosphoglycerate mutase family BKD09_RS22675 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BKD09_RS22675 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BKD09_RS22680 SM00649 Ribosomal protein L11/L12 BKD09_RS22710 SM00663 RNA polymerase I subunit A N-terminus BKD09_RS22720 SM00382 ATPases associated with a variety of cellular activities BKD09_RS22740 SM00838 Elongation factor G C-terminus BKD09_RS22740 SM00889 Elongation factor G, domain IV BKD09_RS22750 SM01403 BKD09_RS22750 BKD09_RS22770 SM01382 BKD09_RS22770 BKD09_RS22770 SM01383 BKD09_RS22770 BKD09_RS22785 SM00322 K homology RNA-binding domain BKD09_RS22805 SM01374 BKD09_RS22805 BKD09_RS22810 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BKD09_RS22875 SM00662 RNA polymerases D BKD09_RS22890 SM00822 BKD09_RS22890 BKD09_RS22895 SM00829 Enoylreductase BKD09_RS22910 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BKD09_RS22915 SM00382 ATPases associated with a variety of cellular activities BKD09_RS22920 SM00363 S4 RNA-binding domain BKD09_RS23015 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BKD09_RS23080 SM00822 BKD09_RS23080 BKD09_RS23085 SM01130 BKD09_RS23085 BKD09_RS23100 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BKD09_RS23100 SM00091 PAS domain BKD09_RS23100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS23100 SM00387 Histidine kinase-like ATPases BKD09_RS23140 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS23195 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BKD09_RS23195 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS23220 SM00822 BKD09_RS23220 BKD09_RS23265 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BKD09_RS23280 SM00421 helix_turn_helix, Lux Regulon BKD09_RS23280 SM00448 cheY-homologous receiver domain BKD09_RS23285 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS23285 SM00387 Histidine kinase-like ATPases BKD09_RS23305 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BKD09_RS23310 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS23340 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BKD09_RS23340 SM00091 PAS domain BKD09_RS23340 SM00387 Histidine kinase-like ATPases BKD09_RS23340 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS23340 SM00448 cheY-homologous receiver domain BKD09_RS23350 SM00878 Biotin carboxylase C-terminal domain BKD09_RS23365 SM00091 PAS domain BKD09_RS23365 SM00387 Histidine kinase-like ATPases BKD09_RS23365 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS23365 SM00448 cheY-homologous receiver domain BKD09_RS23440 SM00833 Cobalamin synthesis protein cobW C-terminal domain BKD09_RS23465 SM00116 Domain in cystathionine beta-synthase and other proteins. BKD09_RS23465 SM00924 MgtE intracellular N domain BKD09_RS23470 SM00530 Helix-turn-helix XRE-family like proteins BKD09_RS23550 SM00271 DnaJ molecular chaperone homology domain BKD09_RS23575 SM00382 ATPases associated with a variety of cellular activities BKD09_RS23575 SM01086 C-terminal, D2-small domain, of ClpB protein BKD09_RS23605 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS23730 SM00448 cheY-homologous receiver domain BKD09_RS23735 SM00267 diguanylate cyclase BKD09_RS23735 SM00448 cheY-homologous receiver domain BKD09_RS23820 SM00316 Ribosomal protein S1-like RNA-binding domain BKD09_RS23820 SM00955 BKD09_RS23820 BKD09_RS23825 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BKD09_RS23825 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BKD09_RS23825 SM00493 BKD09_RS23825 BKD09_RS23840 SM00822 BKD09_RS23840 BKD09_RS23885 SM01207 BKD09_RS23885 BKD09_RS23915 SM00732 Likely ribonuclease with RNase H fold. BKD09_RS23965 SM00845 GatB domain BKD09_RS24110 SM01130 BKD09_RS24110 BKD09_RS24130 SM00986 Uracil DNA glycosylase superfamily BKD09_RS24130 SM00987 UreE urease accessory protein, C-terminal domain BKD09_RS24140 SM01409 BKD09_RS24140 BKD09_RS24145 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BKD09_RS24145 SM00954 Region found in RelA / SpoT proteins BKD09_RS24165 SM00358 Double-stranded RNA binding motif BKD09_RS24165 SM00535 Ribonuclease III family BKD09_RS24190 SM00434 DNA Topoisomerase IV BKD09_RS24215 SM00450 Rhodanese Homology Domain BKD09_RS24225 SM00849 Metallo-beta-lactamase superfamily BKD09_RS24245 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain BKD09_RS24255 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS24280 SM01004 Delta-aminolevulinic acid dehydratase BKD09_RS24290 SM00347 helix_turn_helix multiple antibiotic resistance protein BKD09_RS24385 SM00411 bacterial (prokaryotic) histone like domain BKD09_RS24390 SM00422 helix_turn_helix, mercury resistance BKD09_RS24440 SM00419 helix_turn_helix, cAMP Regulatory protein BKD09_RS24455 SM00857 Resolvase, N terminal domain BKD09_RS24515 SM01130 BKD09_RS24515 BKD09_RS24520 SM00822 BKD09_RS24520 BKD09_RS24530 SM00347 helix_turn_helix multiple antibiotic resistance protein BKD09_RS24580 SM00347 helix_turn_helix multiple antibiotic resistance protein BKD09_RS24635 SM00881 CoA binding domain BKD09_RS24660 SM00267 diguanylate cyclase BKD09_RS24690 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS24705 SM00244 prohibitin homologues BKD09_RS24710 SM00870 BKD09_RS24710 BKD09_RS24715 SM01230 BKD09_RS24715 BKD09_RS24720 SM00938 Nitrogen regulatory protein P-II BKD09_RS24755 SM00382 ATPases associated with a variety of cellular activities BKD09_RS24755 SM00994 ClpX C4-type zinc finger BKD09_RS24755 SM01086 C-terminal, D2-small domain, of ClpB protein BKD09_RS24760 SM00382 ATPases associated with a variety of cellular activities BKD09_RS24760 SM00464 Found in ATP-dependent protease La (LON) BKD09_RS24820 SM00411 bacterial (prokaryotic) histone like domain BKD09_RS24845 SM00347 helix_turn_helix multiple antibiotic resistance protein BKD09_RS24900 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BKD09_RS24905 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BKD09_RS24950 SM00849 Metallo-beta-lactamase superfamily BKD09_RS24995 SM00382 ATPases associated with a variety of cellular activities BKD09_RS25000 SM00382 ATPases associated with a variety of cellular activities BKD09_RS25050 SM00382 ATPases associated with a variety of cellular activities BKD09_RS25115 SM00382 ATPases associated with a variety of cellular activities BKD09_RS25120 SM00829 Enoylreductase BKD09_RS25125 SM00530 Helix-turn-helix XRE-family like proteins BKD09_RS25165 SM00028 Tetratricopeptide repeats BKD09_RS25165 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS25175 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS25235 SM00481 DNA polymerase alpha chain like domain BKD09_RS25240 SM00947 Carbonic anhydrase BKD09_RS25285 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BKD09_RS25330 SM00382 ATPases associated with a variety of cellular activities BKD09_RS25410 SM00852 Probable molybdopterin binding domain BKD09_RS25430 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BKD09_RS25430 SM00245 tail specific protease BKD09_RS25435 SM00052 Putative diguanylate phosphodiesterase BKD09_RS25435 SM00267 diguanylate cyclase BKD09_RS25500 SM00387 Histidine kinase-like ATPases BKD09_RS25500 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS25505 SM00448 cheY-homologous receiver domain BKD09_RS25505 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS25525 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BKD09_RS25525 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS25540 SM00382 ATPases associated with a variety of cellular activities BKD09_RS25555 SM00895 BKD09_RS25555 BKD09_RS25575 SM01192 BKD09_RS25575 BKD09_RS25575 SM01193 BKD09_RS25575 BKD09_RS25580 SM00829 Enoylreductase BKD09_RS25585 SM00849 Metallo-beta-lactamase superfamily BKD09_RS25620 SM00861 Transketolase, pyrimidine binding domain BKD09_RS25660 SM00448 cheY-homologous receiver domain BKD09_RS25665 SM00421 helix_turn_helix, Lux Regulon BKD09_RS25665 SM00448 cheY-homologous receiver domain BKD09_RS25670 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BKD09_RS25670 SM00091 PAS domain BKD09_RS25670 SM00387 Histidine kinase-like ATPases BKD09_RS25670 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS25690 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain BKD09_RS25690 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS25765 SM00671 Sel1-like repeats. BKD09_RS25775 SM00387 Histidine kinase-like ATPases BKD09_RS25775 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS25775 SM00448 cheY-homologous receiver domain BKD09_RS25800 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BKD09_RS25805 SM00836 DALR anticodon binding domain BKD09_RS25805 SM01016 Arginyl tRNA synthetase N terminal dom BKD09_RS25860 SM00448 cheY-homologous receiver domain BKD09_RS25865 SM00650 Ribosomal RNA adenine dimethylases BKD09_RS25870 SM00257 Lysin motif BKD09_RS25935 SM01323 BKD09_RS25935 BKD09_RS26035 SM00028 Tetratricopeptide repeats BKD09_RS26080 SM00382 ATPases associated with a variety of cellular activities BKD09_RS26155 SM00434 DNA Topoisomerase IV BKD09_RS26210 SM00859 Semialdehyde dehydrogenase, NAD binding domain BKD09_RS26250 SM00382 ATPases associated with a variety of cellular activities BKD09_RS26265 SM00062 Bacterial periplasmic substrate-binding proteins BKD09_RS26480 SM00487 DEAD-like helicases superfamily BKD09_RS26480 SM00490 helicase superfamily c-terminal domain BKD09_RS26500 SM00822 BKD09_RS26500 BKD09_RS26505 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BKD09_RS26540 SM00992 Hemimethylated DNA-binding protein YccV like BKD09_RS26565 SM00829 Enoylreductase BKD09_RS26575 SM00028 Tetratricopeptide repeats BKD09_RS26590 SM00422 helix_turn_helix, mercury resistance BKD09_RS26600 SM00729 Elongator protein 3, MiaB family, Radical SAM BKD09_RS26605 SM00448 cheY-homologous receiver domain BKD09_RS26605 SM01012 BKD09_RS26605 BKD09_RS26630 SM00797 Allophanate hydrolase subunit 2 BKD09_RS26635 SM00796 Allophanate hydrolase subunit 1 BKD09_RS26665 SM00062 Bacterial periplasmic substrate-binding proteins BKD09_RS26685 SM00382 ATPases associated with a variety of cellular activities BKD09_RS26710 SM00448 cheY-homologous receiver domain BKD09_RS26760 SM00382 ATPases associated with a variety of cellular activities BKD09_RS26765 SM00382 ATPases associated with a variety of cellular activities BKD09_RS26840 SM00882 Coenzyme A transferase BKD09_RS26845 SM00882 Coenzyme A transferase BKD09_RS26890 SM00028 Tetratricopeptide repeats BKD09_RS26890 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain BKD09_RS26890 SM00454 Sterile alpha motif. BKD09_RS26975 SM00429 ig-like, plexins, transcription factors BKD09_RS26975 SM00710 Parallel beta-helix repeats BKD09_RS26975 SM00869 Autotransporter beta-domain BKD09_RS27005 SM00936 Penicillin-binding protein 5, C-terminal domain BKD09_RS27080 SM00490 helicase superfamily c-terminal domain BKD09_RS27215 SM00382 ATPases associated with a variety of cellular activities BKD09_RS27300 SM00994 ClpX C4-type zinc finger BKD09_RS27330 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS27345 SM00382 ATPases associated with a variety of cellular activities BKD09_RS27345 SM00930 BKD09_RS27345 BKD09_RS27400 SM00382 ATPases associated with a variety of cellular activities BKD09_RS27400 SM00448 cheY-homologous receiver domain BKD09_RS27405 SM00091 PAS domain BKD09_RS27405 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS27405 SM00387 Histidine kinase-like ATPases BKD09_RS27405 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS27415 SM00382 ATPases associated with a variety of cellular activities BKD09_RS27415 SM00448 cheY-homologous receiver domain BKD09_RS27420 SM00091 PAS domain BKD09_RS27420 SM00387 Histidine kinase-like ATPases BKD09_RS27420 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS27480 SM00729 Elongator protein 3, MiaB family, Radical SAM BKD09_RS27520 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain BKD09_RS27570 SM00327 von Willebrand factor (vWF) type A domain BKD09_RS27600 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS27620 SM00244 prohibitin homologues BKD09_RS27640 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS27650 SM00382 ATPases associated with a variety of cellular activities BKD09_RS27655 SM00062 Bacterial periplasmic substrate-binding proteins BKD09_RS27670 SM00382 ATPases associated with a variety of cellular activities BKD09_RS27680 SM01144 BKD09_RS27680 BKD09_RS27720 SM00382 ATPases associated with a variety of cellular activities BKD09_RS27735 SM00062 Bacterial periplasmic substrate-binding proteins BKD09_RS27750 SM01259 BKD09_RS27750 BKD09_RS27760 SM00014 Acid phosphatase homologues BKD09_RS27775 SM01359 BKD09_RS27775 BKD09_RS27775 SM01360 BKD09_RS27775 BKD09_RS27840 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS27840 SM00895 BKD09_RS27840 BKD09_RS27860 SM01130 BKD09_RS27860 BKD09_RS27870 SM00878 Biotin carboxylase C-terminal domain BKD09_RS27885 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS27895 SM00344 helix_turn_helix ASNC type BKD09_RS27935 SM00357 Cold shock protein domain BKD09_RS27975 SM00411 bacterial (prokaryotic) histone like domain BKD09_RS28200 SM00841 Elongation factor P, C-terminal BKD09_RS28200 SM01185 BKD09_RS28200 BKD09_RS28220 SM00347 helix_turn_helix multiple antibiotic resistance protein BKD09_RS28245 SM01007 Class II Aldolase and Adducin N-terminal domain BKD09_RS28290 SM00849 Metallo-beta-lactamase superfamily BKD09_RS28355 SM00859 Semialdehyde dehydrogenase, NAD binding domain BKD09_RS28360 SM00859 Semialdehyde dehydrogenase, NAD binding domain BKD09_RS28370 SM00849 Metallo-beta-lactamase superfamily BKD09_RS28380 SM00387 Histidine kinase-like ATPases BKD09_RS28380 SM00433 TopoisomeraseII BKD09_RS28405 SM00822 BKD09_RS28405 BKD09_RS28430 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS28435 SM00487 DEAD-like helicases superfamily BKD09_RS28435 SM00490 helicase superfamily c-terminal domain BKD09_RS28440 SM00267 diguanylate cyclase BKD09_RS28475 SM00382 ATPases associated with a variety of cellular activities BKD09_RS28530 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BKD09_RS28530 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS28530 SM01049 BKD09_RS28530 BKD09_RS28535 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BKD09_RS28535 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS28535 SM01049 BKD09_RS28535 BKD09_RS28570 SM00382 ATPases associated with a variety of cellular activities BKD09_RS28610 SM00937 BKD09_RS28610 BKD09_RS28620 SM00646 BKD09_RS28620 BKD09_RS28635 SM00530 Helix-turn-helix XRE-family like proteins BKD09_RS28660 SM00028 Tetratricopeptide repeats BKD09_RS28685 SM00878 Biotin carboxylase C-terminal domain BKD09_RS28690 SM00387 Histidine kinase-like ATPases BKD09_RS28690 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS28695 SM00448 cheY-homologous receiver domain BKD09_RS28700 SM00387 Histidine kinase-like ATPases BKD09_RS28700 SM00448 cheY-homologous receiver domain BKD09_RS28725 SM00849 Metallo-beta-lactamase superfamily BKD09_RS28735 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS28755 SM00448 cheY-homologous receiver domain BKD09_RS28760 SM00387 Histidine kinase-like ATPases BKD09_RS28760 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS28760 SM00448 cheY-homologous receiver domain BKD09_RS28770 SM00869 Autotransporter beta-domain BKD09_RS28790 SM00470 ParB-like nuclease domain BKD09_RS28850 SM00530 Helix-turn-helix XRE-family like proteins BKD09_RS28875 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS28950 SM00347 helix_turn_helix multiple antibiotic resistance protein BKD09_RS29025 SM00100 Cyclic nucleotide-monophosphate binding domain BKD09_RS29030 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain BKD09_RS29060 SM01130 BKD09_RS29060 BKD09_RS29065 SM00382 ATPases associated with a variety of cellular activities BKD09_RS29100 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BKD09_RS29100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS29110 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS29125 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BKD09_RS29175 SM00849 Metallo-beta-lactamase superfamily BKD09_RS29185 SM00382 ATPases associated with a variety of cellular activities BKD09_RS29200 SM00869 Autotransporter beta-domain BKD09_RS29205 SM00869 Autotransporter beta-domain BKD09_RS29215 SM00671 Sel1-like repeats. BKD09_RS29230 SM01230 BKD09_RS29230 BKD09_RS29320 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS29380 SM00919 Malic enzyme, NAD binding domain BKD09_RS29380 SM01274 BKD09_RS29380 BKD09_RS29400 SM01321 BKD09_RS29400 BKD09_RS29440 SM00382 ATPases associated with a variety of cellular activities BKD09_RS29450 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS29450 SM00895 BKD09_RS29450 BKD09_RS29455 SM00829 Enoylreductase BKD09_RS29465 SM00474 3'-5' exonuclease BKD09_RS29480 SM00346 helix_turn_helix isocitrate lyase regulation BKD09_RS29510 SM00869 Autotransporter beta-domain BKD09_RS29515 SM00357 Cold shock protein domain BKD09_RS29565 SM00562 BKD09_RS29565 BKD09_RS29580 SM00382 ATPases associated with a variety of cellular activities BKD09_RS29595 SM00382 ATPases associated with a variety of cellular activities BKD09_RS29645 SM00650 Ribosomal RNA adenine dimethylases BKD09_RS29650 SM00829 Enoylreductase BKD09_RS29665 SM00419 helix_turn_helix, cAMP Regulatory protein BKD09_RS29700 SM00072 Guanylate kinase homologues. BKD09_RS29715 SM00825 Beta-ketoacyl synthase BKD09_RS29720 SM00823 Phosphopantetheine attachment site BKD09_RS29725 SM00822 BKD09_RS29725 BKD09_RS29730 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BKD09_RS29785 SM00382 ATPases associated with a variety of cellular activities BKD09_RS29790 SM01005 Alanine racemase, C-terminal domain BKD09_RS29825 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS29825 SM00895 BKD09_RS29825 BKD09_RS29845 SM00382 ATPases associated with a variety of cellular activities BKD09_RS29850 SM00062 Bacterial periplasmic substrate-binding proteins BKD09_RS29865 SM00052 Putative diguanylate phosphodiesterase BKD09_RS29865 SM00267 diguanylate cyclase BKD09_RS29865 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS29875 SM00382 ATPases associated with a variety of cellular activities BKD09_RS29890 SM00822 BKD09_RS29890 BKD09_RS29975 SM00382 ATPases associated with a variety of cellular activities BKD09_RS29980 SM00382 ATPases associated with a variety of cellular activities BKD09_RS30085 SM00347 helix_turn_helix multiple antibiotic resistance protein BKD09_RS30100 SM00347 helix_turn_helix multiple antibiotic resistance protein BKD09_RS30130 SM00028 Tetratricopeptide repeats BKD09_RS30180 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BKD09_RS30190 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS30190 SM00871 Bacterial transcription activator, effector binding domain BKD09_RS30220 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS30255 SM00822 BKD09_RS30255 BKD09_RS30265 SM00255 Toll - interleukin 1 - resistance BKD09_RS30290 SM00357 Cold shock protein domain BKD09_RS30315 SM01119 BKD09_RS30315 BKD09_RS30330 SM00382 ATPases associated with a variety of cellular activities BKD09_RS30335 SM00062 Bacterial periplasmic substrate-binding proteins BKD09_RS30350 SM00354 helix_turn _helix lactose operon repressor BKD09_RS30360 SM00829 Enoylreductase BKD09_RS30365 SM00116 Domain in cystathionine beta-synthase and other proteins. BKD09_RS30365 SM01240 BKD09_RS30365 BKD09_RS30400 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BKD09_RS30420 SM00382 ATPases associated with a variety of cellular activities BKD09_RS30425 SM01119 BKD09_RS30425 BKD09_RS30445 SM00822 BKD09_RS30445 BKD09_RS30550 SM00346 helix_turn_helix isocitrate lyase regulation BKD09_RS30560 SM00062 Bacterial periplasmic substrate-binding proteins BKD09_RS30575 SM00382 ATPases associated with a variety of cellular activities BKD09_RS30585 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BKD09_RS30600 SM00346 helix_turn_helix isocitrate lyase regulation BKD09_RS30620 SM00100 Cyclic nucleotide-monophosphate binding domain BKD09_RS30690 SM00382 ATPases associated with a variety of cellular activities BKD09_RS30695 SM00354 helix_turn _helix lactose operon repressor BKD09_RS30760 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BKD09_RS30800 SM00382 ATPases associated with a variety of cellular activities BKD09_RS30805 SM00382 ATPases associated with a variety of cellular activities BKD09_RS30885 SM01130 BKD09_RS30885 BKD09_RS30890 SM00346 helix_turn_helix isocitrate lyase regulation BKD09_RS30895 SM00849 Metallo-beta-lactamase superfamily BKD09_RS30920 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS30920 SM00895 BKD09_RS30920 BKD09_RS30970 SM00421 helix_turn_helix, Lux Regulon BKD09_RS30975 SM00421 helix_turn_helix, Lux Regulon BKD09_RS30985 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS30990 SM00421 helix_turn_helix, Lux Regulon BKD09_RS31080 SM00347 helix_turn_helix multiple antibiotic resistance protein BKD09_RS31090 SM00062 Bacterial periplasmic substrate-binding proteins BKD09_RS31095 SM00382 ATPases associated with a variety of cellular activities BKD09_RS31100 SM00382 ATPases associated with a variety of cellular activities BKD09_RS31135 SM00382 ATPases associated with a variety of cellular activities BKD09_RS31140 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS31140 SM00895 BKD09_RS31140 BKD09_RS31200 SM00062 Bacterial periplasmic substrate-binding proteins BKD09_RS31240 SM00347 helix_turn_helix multiple antibiotic resistance protein BKD09_RS31245 SM00382 ATPases associated with a variety of cellular activities BKD09_RS31250 SM00382 ATPases associated with a variety of cellular activities BKD09_RS31285 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BKD09_RS31300 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain BKD09_RS31320 SM00419 helix_turn_helix, cAMP Regulatory protein BKD09_RS31360 SM00825 Beta-ketoacyl synthase BKD09_RS31380 SM00028 Tetratricopeptide repeats BKD09_RS31380 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS31385 SM00869 Autotransporter beta-domain BKD09_RS31400 SM00450 Rhodanese Homology Domain BKD09_RS31450 SM00382 ATPases associated with a variety of cellular activities BKD09_RS31465 SM00917 LeuA allosteric (dimerisation) domain BKD09_RS31540 SM00387 Histidine kinase-like ATPases BKD09_RS31540 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS31545 SM00448 cheY-homologous receiver domain BKD09_RS31545 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS31580 SM00421 helix_turn_helix, Lux Regulon BKD09_RS31635 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS31675 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS31775 SM00729 Elongator protein 3, MiaB family, Radical SAM BKD09_RS31795 SM00387 Histidine kinase-like ATPases BKD09_RS31795 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS31800 SM00448 cheY-homologous receiver domain BKD09_RS31800 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS31810 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain BKD09_RS31810 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS31855 SM00387 Histidine kinase-like ATPases BKD09_RS31855 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS31930 SM00387 Histidine kinase-like ATPases BKD09_RS31930 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS31935 SM00448 cheY-homologous receiver domain BKD09_RS31935 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS32005 SM00062 Bacterial periplasmic substrate-binding proteins BKD09_RS32010 SM00382 ATPases associated with a variety of cellular activities BKD09_RS32045 SM00382 ATPases associated with a variety of cellular activities BKD09_RS32050 SM00062 Bacterial periplasmic substrate-binding proteins BKD09_RS32060 SM00903 Flavin reductase like domain BKD09_RS32075 SM00382 ATPases associated with a variety of cellular activities BKD09_RS32115 SM00344 helix_turn_helix ASNC type BKD09_RS32140 SM00382 ATPases associated with a variety of cellular activities BKD09_RS32165 SM01007 Class II Aldolase and Adducin N-terminal domain BKD09_RS32205 SM01092 CO dehydrogenase flavoprotein C-terminal domain BKD09_RS32210 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BKD09_RS32215 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS32270 SM00849 Metallo-beta-lactamase superfamily BKD09_RS32290 SM00347 helix_turn_helix multiple antibiotic resistance protein BKD09_RS32340 SM00382 ATPases associated with a variety of cellular activities BKD09_RS32345 SM00382 ATPases associated with a variety of cellular activities BKD09_RS32350 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain BKD09_RS32350 SM00454 Sterile alpha motif. BKD09_RS32380 SM00835 Cupin BKD09_RS32395 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS32405 SM00382 ATPases associated with a variety of cellular activities BKD09_RS32405 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS32425 SM00850 LytTr DNA-binding domain BKD09_RS32525 SM00347 helix_turn_helix multiple antibiotic resistance protein BKD09_RS32530 SM00347 helix_turn_helix multiple antibiotic resistance protein BKD09_RS32560 SM01060 BKD09_RS32560 BKD09_RS32565 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS32570 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS32575 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS32625 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS32630 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BKD09_RS32630 SM00091 PAS domain BKD09_RS32630 SM00387 Histidine kinase-like ATPases BKD09_RS32630 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS32635 SM00421 helix_turn_helix, Lux Regulon BKD09_RS32635 SM00448 cheY-homologous receiver domain BKD09_RS32640 SM00448 cheY-homologous receiver domain BKD09_RS32660 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS32665 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BKD09_RS32705 SM00849 Metallo-beta-lactamase superfamily BKD09_RS32740 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BKD09_RS32740 SM00387 Histidine kinase-like ATPases BKD09_RS32740 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS32750 SM00835 Cupin BKD09_RS32825 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS32830 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS32855 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS32860 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS32890 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS32890 SM00387 Histidine kinase-like ATPases BKD09_RS32890 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS32895 SM00448 cheY-homologous receiver domain BKD09_RS32895 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS32935 SM00421 helix_turn_helix, Lux Regulon BKD09_RS32940 SM00421 helix_turn_helix, Lux Regulon BKD09_RS33015 SM00421 helix_turn_helix, Lux Regulon BKD09_RS33080 SM00382 ATPases associated with a variety of cellular activities BKD09_RS33090 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BKD09_RS33090 SM00387 Histidine kinase-like ATPases BKD09_RS33090 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS33090 SM00448 cheY-homologous receiver domain BKD09_RS33100 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS33115 SM00382 ATPases associated with a variety of cellular activities BKD09_RS33120 SM00382 ATPases associated with a variety of cellular activities BKD09_RS33145 SM01092 CO dehydrogenase flavoprotein C-terminal domain BKD09_RS33155 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BKD09_RS33165 SM00382 ATPases associated with a variety of cellular activities BKD09_RS33170 SM00327 von Willebrand factor (vWF) type A domain BKD09_RS33195 SM00354 helix_turn _helix lactose operon repressor BKD09_RS33225 SM00822 BKD09_RS33225 BKD09_RS33260 SM00382 ATPases associated with a variety of cellular activities BKD09_RS33275 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS33275 SM00895 BKD09_RS33275 BKD09_RS33280 SM00849 Metallo-beta-lactamase superfamily BKD09_RS33310 SM00382 ATPases associated with a variety of cellular activities BKD09_RS33315 SM00382 ATPases associated with a variety of cellular activities BKD09_RS33345 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS33345 SM00895 BKD09_RS33345 BKD09_RS33355 SM00487 DEAD-like helicases superfamily BKD09_RS33355 SM00490 helicase superfamily c-terminal domain BKD09_RS33355 SM00982 BKD09_RS33355 BKD09_RS33355 SM01058 CarD-like/TRCF domain BKD09_RS33370 SM00354 helix_turn _helix lactose operon repressor BKD09_RS33445 SM00382 ATPases associated with a variety of cellular activities BKD09_RS33460 SM00886 Stress responsive A/B Barrel Domain BKD09_RS33490 SM00382 ATPases associated with a variety of cellular activities BKD09_RS33515 SM00382 ATPases associated with a variety of cellular activities BKD09_RS33520 SM00382 ATPases associated with a variety of cellular activities BKD09_RS33540 SM00382 ATPases associated with a variety of cellular activities BKD09_RS33585 SM00903 Flavin reductase like domain BKD09_RS33615 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS33645 SM00855 Phosphoglycerate mutase family BKD09_RS33720 SM00833 Cobalamin synthesis protein cobW C-terminal domain BKD09_RS33770 SM00912 haemagglutination activity domain BKD09_RS33785 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS33785 SM00387 Histidine kinase-like ATPases BKD09_RS33785 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS33785 SM00448 cheY-homologous receiver domain BKD09_RS33820 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS33855 SM00382 ATPases associated with a variety of cellular activities BKD09_RS33860 SM00382 ATPases associated with a variety of cellular activities BKD09_RS33900 SM00382 ATPases associated with a variety of cellular activities BKD09_RS33930 SM00327 von Willebrand factor (vWF) type A domain BKD09_RS33960 SM00387 Histidine kinase-like ATPases BKD09_RS33975 SM00382 ATPases associated with a variety of cellular activities BKD09_RS34000 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS34000 SM00895 BKD09_RS34000 BKD09_RS34015 SM00382 ATPases associated with a variety of cellular activities BKD09_RS34030 SM00567 E-Z type HEAT repeats BKD09_RS34055 SM00100 Cyclic nucleotide-monophosphate binding domain BKD09_RS34070 SM00382 ATPases associated with a variety of cellular activities BKD09_RS34085 SM00382 ATPases associated with a variety of cellular activities BKD09_RS34090 SM00382 ATPases associated with a variety of cellular activities BKD09_RS34130 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BKD09_RS34130 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BKD09_RS34135 SM00344 helix_turn_helix ASNC type BKD09_RS34145 SM01092 CO dehydrogenase flavoprotein C-terminal domain BKD09_RS34150 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BKD09_RS34240 SM00346 helix_turn_helix isocitrate lyase regulation BKD09_RS34245 SM00881 CoA binding domain BKD09_RS34250 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS34250 SM00895 BKD09_RS34250 BKD09_RS34265 SM00729 Elongator protein 3, MiaB family, Radical SAM BKD09_RS34265 SM00876 Biotin and Thiamin Synthesis associated domain BKD09_RS34285 SM00357 Cold shock protein domain BKD09_RS34295 SM00530 Helix-turn-helix XRE-family like proteins BKD09_RS34330 SM00116 Domain in cystathionine beta-synthase and other proteins. BKD09_RS34370 SM00829 Enoylreductase BKD09_RS34380 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BKD09_RS34380 SM00091 PAS domain BKD09_RS34380 SM00387 Histidine kinase-like ATPases BKD09_RS34380 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS34395 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BKD09_RS34400 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BKD09_RS34400 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BKD09_RS34420 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS34420 SM00387 Histidine kinase-like ATPases BKD09_RS34420 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS34475 SM00282 Laminin G domain BKD09_RS34520 SM00912 haemagglutination activity domain BKD09_RS34590 SM00028 Tetratricopeptide repeats BKD09_RS34640 SM00382 ATPases associated with a variety of cellular activities BKD09_RS34655 SM00671 Sel1-like repeats. BKD09_RS34675 SM00382 ATPases associated with a variety of cellular activities BKD09_RS34695 SM00448 cheY-homologous receiver domain BKD09_RS34695 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS34700 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BKD09_RS34705 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BKD09_RS34705 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS34725 SM00028 Tetratricopeptide repeats BKD09_RS34740 SM00387 Histidine kinase-like ATPases BKD09_RS34745 SM00448 cheY-homologous receiver domain BKD09_RS34745 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS34755 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen BKD09_RS34785 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BKD09_RS34785 SM00387 Histidine kinase-like ATPases BKD09_RS34785 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS34865 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BKD09_RS34870 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BKD09_RS34935 SM00861 Transketolase, pyrimidine binding domain BKD09_RS34945 SM00822 BKD09_RS34945 BKD09_RS34955 SM00849 Metallo-beta-lactamase superfamily BKD09_RS34990 SM00091 PAS domain BKD09_RS34990 SM00387 Histidine kinase-like ATPases BKD09_RS34990 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS35020 SM01007 Class II Aldolase and Adducin N-terminal domain BKD09_RS35055 SM00905 Dihydroneopterin aldolase BKD09_RS35115 SM00710 Parallel beta-helix repeats BKD09_RS35140 SM00267 diguanylate cyclase BKD09_RS35215 SM00481 DNA polymerase alpha chain like domain BKD09_RS35230 SM00729 Elongator protein 3, MiaB family, Radical SAM BKD09_RS35235 SM00986 Uracil DNA glycosylase superfamily BKD09_RS35235 SM00987 UreE urease accessory protein, C-terminal domain BKD09_RS35360 SM00729 Elongator protein 3, MiaB family, Radical SAM BKD09_RS35370 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BKD09_RS35370 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS35425 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BKD09_RS35430 SM00460 Transglutaminase/protease-like homologues BKD09_RS35440 SM00460 Transglutaminase/protease-like homologues BKD09_RS35450 SM00858 BKD09_RS35450 BKD09_RS35465 SM00382 ATPases associated with a variety of cellular activities BKD09_RS35470 SM00382 ATPases associated with a variety of cellular activities BKD09_RS35485 SM00347 helix_turn_helix multiple antibiotic resistance protein BKD09_RS35550 SM00822 BKD09_RS35550 BKD09_RS35625 SM00822 BKD09_RS35625 BKD09_RS35640 SM00903 Flavin reductase like domain BKD09_RS35675 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BKD09_RS35695 SM01007 Class II Aldolase and Adducin N-terminal domain BKD09_RS35700 SM00382 ATPases associated with a variety of cellular activities BKD09_RS35705 SM00382 ATPases associated with a variety of cellular activities BKD09_RS35755 SM01329 BKD09_RS35755 BKD09_RS35795 SM00062 Bacterial periplasmic substrate-binding proteins BKD09_RS35945 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS35945 SM00895 BKD09_RS35945 BKD09_RS35975 SM00419 helix_turn_helix, cAMP Regulatory protein BKD09_RS35990 SM00729 Elongator protein 3, MiaB family, Radical SAM BKD09_RS36085 SM00911 HWE histidine kinase BKD09_RS36110 SM00448 cheY-homologous receiver domain BKD09_RS36160 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen BKD09_RS36295 SM00460 Transglutaminase/protease-like homologues BKD09_RS36305 SM00014 Acid phosphatase homologues BKD09_RS36320 SM00387 Histidine kinase-like ATPases BKD09_RS36320 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS36375 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS36390 SM00829 Enoylreductase BKD09_RS36525 SM00382 ATPases associated with a variety of cellular activities BKD09_RS36530 SM00382 ATPases associated with a variety of cellular activities BKD09_RS36545 SM00382 ATPases associated with a variety of cellular activities BKD09_RS36550 SM00382 ATPases associated with a variety of cellular activities BKD09_RS36575 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain BKD09_RS36575 SM00448 cheY-homologous receiver domain BKD09_RS36580 SM00448 cheY-homologous receiver domain BKD09_RS36585 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BKD09_RS36585 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS36585 SM00387 Histidine kinase-like ATPases BKD09_RS36585 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS36655 SM00382 ATPases associated with a variety of cellular activities BKD09_RS36700 SM00855 Phosphoglycerate mutase family BKD09_RS36725 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS36725 SM00895 BKD09_RS36725 BKD09_RS36730 SM00838 Elongation factor G C-terminus BKD09_RS36730 SM00889 Elongation factor G, domain IV BKD09_RS36750 SM00460 Transglutaminase/protease-like homologues BKD09_RS36775 SM00861 Transketolase, pyrimidine binding domain BKD09_RS36780 SM00344 helix_turn_helix ASNC type BKD09_RS36815 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BKD09_RS36835 SM00382 ATPases associated with a variety of cellular activities BKD09_RS36860 SM00331 Sigma factor PP2C-like phosphatases BKD09_RS36860 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BKD09_RS36875 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain BKD09_RS36875 SM00454 Sterile alpha motif. BKD09_RS36890 SM00911 HWE histidine kinase BKD09_RS36895 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BKD09_RS36910 SM00448 cheY-homologous receiver domain BKD09_RS36910 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS36915 SM00387 Histidine kinase-like ATPases BKD09_RS36915 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS36935 SM00530 Helix-turn-helix XRE-family like proteins BKD09_RS36950 SM01022 BKD09_RS36950 BKD09_RS36955 SM01329 BKD09_RS36955 BKD09_RS36960 SM00829 Enoylreductase BKD09_RS36965 SM00382 ATPases associated with a variety of cellular activities BKD09_RS36970 SM00382 ATPases associated with a variety of cellular activities BKD09_RS37050 SM00116 Domain in cystathionine beta-synthase and other proteins. BKD09_RS37060 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BKD09_RS37060 SM00091 PAS domain BKD09_RS37060 SM00387 Histidine kinase-like ATPases BKD09_RS37060 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS37065 SM00421 helix_turn_helix, Lux Regulon BKD09_RS37065 SM00448 cheY-homologous receiver domain BKD09_RS37070 SM00448 cheY-homologous receiver domain BKD09_RS37075 SM00100 Cyclic nucleotide-monophosphate binding domain BKD09_RS37075 SM00419 helix_turn_helix, cAMP Regulatory protein BKD09_RS37095 SM00382 ATPases associated with a variety of cellular activities BKD09_RS37105 SM00849 Metallo-beta-lactamase superfamily BKD09_RS37110 SM00267 diguanylate cyclase BKD09_RS37160 SM01329 BKD09_RS37160 BKD09_RS37170 SM00729 Elongator protein 3, MiaB family, Radical SAM BKD09_RS37190 SM00729 Elongator protein 3, MiaB family, Radical SAM BKD09_RS37210 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BKD09_RS37285 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BKD09_RS37435 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BKD09_RS37460 SM01130 BKD09_RS37460 BKD09_RS37470 SM00354 helix_turn _helix lactose operon repressor BKD09_RS37490 SM00387 Histidine kinase-like ATPases BKD09_RS37490 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS37505 SM00448 cheY-homologous receiver domain BKD09_RS37505 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS37545 SM00100 Cyclic nucleotide-monophosphate binding domain BKD09_RS37565 SM00883 Chaperonin 10 Kd subunit BKD09_RS37610 SM00861 Transketolase, pyrimidine binding domain BKD09_RS37620 SM00363 S4 RNA-binding domain BKD09_RS37635 SM00382 ATPases associated with a variety of cellular activities BKD09_RS37655 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS37655 SM00895 BKD09_RS37655 BKD09_RS37715 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain BKD09_RS37725 SM00855 Phosphoglycerate mutase family BKD09_RS37745 SM00271 DnaJ molecular chaperone homology domain BKD09_RS37800 SM00849 Metallo-beta-lactamase superfamily BKD09_RS37830 SM00530 Helix-turn-helix XRE-family like proteins BKD09_RS37910 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BKD09_RS37910 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS37910 SM00387 Histidine kinase-like ATPases BKD09_RS37910 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS37910 SM00448 cheY-homologous receiver domain BKD09_RS37915 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BKD09_RS37915 SM00448 cheY-homologous receiver domain BKD09_RS37915 SM00911 HWE histidine kinase BKD09_RS37955 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BKD09_RS37975 SM00382 ATPases associated with a variety of cellular activities BKD09_RS37980 SM00961 Ribulose bisphosphate carboxylase, small chain BKD09_RS37995 SM00861 Transketolase, pyrimidine binding domain BKD09_RS38150 SM00450 Rhodanese Homology Domain BKD09_RS38190 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BKD09_RS38190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS38195 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BKD09_RS38195 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS38195 SM01358 BKD09_RS38195 BKD09_RS38200 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BKD09_RS38200 SM00397 Helical region found in SNAREs BKD09_RS38205 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BKD09_RS38205 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS38220 SM00829 Enoylreductase BKD09_RS38300 SM00825 Beta-ketoacyl synthase BKD09_RS38340 SM00028 Tetratricopeptide repeats BKD09_RS38350 SM00986 Uracil DNA glycosylase superfamily BKD09_RS38350 SM00987 UreE urease accessory protein, C-terminal domain BKD09_RS38370 SM00729 Elongator protein 3, MiaB family, Radical SAM BKD09_RS38400 SM00347 helix_turn_helix multiple antibiotic resistance protein BKD09_RS38405 SM00852 Probable molybdopterin binding domain BKD09_RS38440 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BKD09_RS38440 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS38440 SM01358 BKD09_RS38440 BKD09_RS38445 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BKD09_RS38445 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS38445 SM01358 BKD09_RS38445 BKD09_RS38450 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BKD09_RS38450 SM00448 cheY-homologous receiver domain BKD09_RS38450 SM00911 HWE histidine kinase BKD09_RS38490 SM00478 endonuclease III BKD09_RS38490 SM00525 BKD09_RS38490 BKD09_RS38505 SM00968 SMC proteins Flexible Hinge Domain BKD09_RS38625 SM00829 Enoylreductase BKD09_RS38640 SM00564 beta-propeller repeat BKD09_RS38755 SM00530 Helix-turn-helix XRE-family like proteins BKD09_RS38775 SM00028 Tetratricopeptide repeats BKD09_RS38820 SM00382 ATPases associated with a variety of cellular activities BKD09_RS38825 SM00382 ATPases associated with a variety of cellular activities BKD09_RS38845 SM00420 helix_turn_helix, Deoxyribose operon repressor BKD09_RS38845 SM01134 BKD09_RS38845 BKD09_RS38900 SM00903 Flavin reductase like domain BKD09_RS39005 SM00450 Rhodanese Homology Domain BKD09_RS39015 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BKD09_RS39015 SM00091 PAS domain BKD09_RS39015 SM00267 diguanylate cyclase BKD09_RS39050 SM00052 Putative diguanylate phosphodiesterase BKD09_RS39050 SM00267 diguanylate cyclase BKD09_RS39065 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS39065 SM00895 BKD09_RS39065 BKD09_RS39085 SM00448 cheY-homologous receiver domain BKD09_RS39085 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS39095 SM00849 Metallo-beta-lactamase superfamily BKD09_RS39105 SM00984 UDP binding domain BKD09_RS39305 SM00448 cheY-homologous receiver domain BKD09_RS39310 SM00138 Methyltransferase, chemotaxis proteins BKD09_RS39315 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BKD09_RS39315 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS39320 SM00260 Two component signalling adaptor domain BKD09_RS39325 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BKD09_RS39325 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS39330 SM00260 Two component signalling adaptor domain BKD09_RS39335 SM00073 Histidine Phosphotransfer domain BKD09_RS39335 SM00260 Two component signalling adaptor domain BKD09_RS39335 SM00387 Histidine kinase-like ATPases BKD09_RS39335 SM01231 BKD09_RS39335 BKD09_RS39340 SM00448 cheY-homologous receiver domain BKD09_RS39350 SM00448 cheY-homologous receiver domain BKD09_RS39350 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BKD09_RS39360 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain BKD09_RS39360 SM01080 BKD09_RS39360 BKD09_RS39375 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS39405 SM00267 diguanylate cyclase BKD09_RS39410 SM00869 Autotransporter beta-domain BKD09_RS39425 SM00563 Phosphate acyltransferases BKD09_RS39455 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS39455 SM00895 BKD09_RS39455 BKD09_RS39465 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BKD09_RS39470 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BKD09_RS39490 SM00852 Probable molybdopterin binding domain BKD09_RS39515 SM00852 Probable molybdopterin binding domain BKD09_RS39520 SM00852 Probable molybdopterin binding domain BKD09_RS39565 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS39570 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain BKD09_RS39570 SM00454 Sterile alpha motif. BKD09_RS39630 SM00245 tail specific protease BKD09_RS39670 SM00382 ATPases associated with a variety of cellular activities BKD09_RS39710 SM00357 Cold shock protein domain BKD09_RS39735 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BKD09_RS39780 SM00320 WD40 repeats BKD09_RS39845 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS39895 SM00822 BKD09_RS39895 BKD09_RS39950 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain BKD09_RS39995 SM00849 Metallo-beta-lactamase superfamily BKD09_RS40015 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS40050 SM00382 ATPases associated with a variety of cellular activities BKD09_RS40055 SM00382 ATPases associated with a variety of cellular activities BKD09_RS40075 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BKD09_RS40080 SM01133 BKD09_RS40080 BKD09_RS40090 SM00382 ATPases associated with a variety of cellular activities BKD09_RS40115 SM00354 helix_turn _helix lactose operon repressor BKD09_RS40130 SM00633 Glycosyl hydrolase family 10 BKD09_RS40145 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain BKD09_RS40145 SM00454 Sterile alpha motif. BKD09_RS40150 SM00823 Phosphopantetheine attachment site BKD09_RS40165 SM00382 ATPases associated with a variety of cellular activities BKD09_RS40180 SM00100 Cyclic nucleotide-monophosphate binding domain BKD09_RS40180 SM00419 helix_turn_helix, cAMP Regulatory protein BKD09_RS40225 SM00382 ATPases associated with a variety of cellular activities BKD09_RS40235 SM00062 Bacterial periplasmic substrate-binding proteins BKD09_RS40235 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BKD09_RS40240 SM00530 Helix-turn-helix XRE-family like proteins BKD09_RS40255 SM00530 Helix-turn-helix XRE-family like proteins BKD09_RS40260 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BKD09_RS40265 SM01092 CO dehydrogenase flavoprotein C-terminal domain BKD09_RS40335 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS40355 SM00382 ATPases associated with a variety of cellular activities BKD09_RS40360 SM00448 cheY-homologous receiver domain BKD09_RS40360 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS40385 SM00138 Methyltransferase, chemotaxis proteins BKD09_RS40390 SM00448 cheY-homologous receiver domain BKD09_RS40395 SM00448 cheY-homologous receiver domain BKD09_RS40400 SM00260 Two component signalling adaptor domain BKD09_RS40405 SM00073 Histidine Phosphotransfer domain BKD09_RS40405 SM00260 Two component signalling adaptor domain BKD09_RS40405 SM00387 Histidine kinase-like ATPases BKD09_RS40405 SM00448 cheY-homologous receiver domain BKD09_RS40405 SM01231 BKD09_RS40405 BKD09_RS40460 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BKD09_RS40460 SM00387 Histidine kinase-like ATPases BKD09_RS40470 SM00387 Histidine kinase-like ATPases BKD09_RS40470 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS40470 SM00448 cheY-homologous receiver domain BKD09_RS40475 SM00382 ATPases associated with a variety of cellular activities BKD09_RS40480 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BKD09_RS40480 SM00091 PAS domain BKD09_RS40480 SM00387 Histidine kinase-like ATPases BKD09_RS40480 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS40480 SM00448 cheY-homologous receiver domain BKD09_RS40515 SM00861 Transketolase, pyrimidine binding domain BKD09_RS40760 SM00357 Cold shock protein domain BKD09_RS40795 SM00530 Helix-turn-helix XRE-family like proteins BKD09_RS40810 SM00100 Cyclic nucleotide-monophosphate binding domain BKD09_RS40810 SM00419 helix_turn_helix, cAMP Regulatory protein BKD09_RS40815 SM00823 Phosphopantetheine attachment site BKD09_RS40815 SM00824 Thioesterase BKD09_RS40825 SM00823 Phosphopantetheine attachment site BKD09_RS40890 SM00729 Elongator protein 3, MiaB family, Radical SAM BKD09_RS40890 SM00876 Biotin and Thiamin Synthesis associated domain BKD09_RS40895 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS40895 SM00895 BKD09_RS40895 BKD09_RS40900 SM00886 Stress responsive A/B Barrel Domain BKD09_RS40930 SM01230 BKD09_RS40930 BKD09_RS41010 SM00318 Staphylococcal nuclease homologues BKD09_RS41015 SM00947 Carbonic anhydrase BKD09_RS41030 SM00883 Chaperonin 10 Kd subunit BKD09_RS41105 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BKD09_RS41115 SM00893 Electron transfer flavoprotein domain BKD09_RS41120 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BKD09_RS41120 SM00382 ATPases associated with a variety of cellular activities BKD09_RS41160 SM00382 ATPases associated with a variety of cellular activities BKD09_RS41215 SM00422 helix_turn_helix, mercury resistance BKD09_RS41265 SM00729 Elongator protein 3, MiaB family, Radical SAM BKD09_RS41310 SM00710 Parallel beta-helix repeats BKD09_RS41340 SM00530 Helix-turn-helix XRE-family like proteins BKD09_RS41380 SM00729 Elongator protein 3, MiaB family, Radical SAM BKD09_RS41485 SM00364 Leucine-rich repeats, bacterial type BKD09_RS41485 SM00369 Leucine-rich repeats, typical (most populated) subfamily BKD09_RS41575 SM00357 Cold shock protein domain BKD09_RS41655 SM00382 ATPases associated with a variety of cellular activities BKD09_RS41660 SM00382 ATPases associated with a variety of cellular activities BKD09_RS41670 SM00135 Low-density lipoprotein-receptor YWTD domain BKD09_RS41710 SM00357 Cold shock protein domain BKD09_RS41715 SM00421 helix_turn_helix, Lux Regulon BKD09_RS41740 SM00382 ATPases associated with a variety of cellular activities BKD09_RS42095 SM00382 ATPases associated with a variety of cellular activities BKD09_RS42100 SM00382 ATPases associated with a variety of cellular activities BKD09_RS42135 SM00382 ATPases associated with a variety of cellular activities BKD09_RS42175 SM00100 Cyclic nucleotide-monophosphate binding domain BKD09_RS42220 SM00382 ATPases associated with a variety of cellular activities BKD09_RS42250 SM00382 ATPases associated with a variety of cellular activities BKD09_RS42295 SM00893 Electron transfer flavoprotein domain BKD09_RS42300 SM00893 Electron transfer flavoprotein domain BKD09_RS42315 SM01329 BKD09_RS42315 BKD09_RS42335 SM00878 Biotin carboxylase C-terminal domain BKD09_RS42385 SM00344 helix_turn_helix ASNC type BKD09_RS42410 SM00344 helix_turn_helix ASNC type BKD09_RS42425 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain BKD09_RS42470 SM00823 Phosphopantetheine attachment site BKD09_RS42500 SM00530 Helix-turn-helix XRE-family like proteins BKD09_RS42525 SM00530 Helix-turn-helix XRE-family like proteins BKD09_RS42550 SM00382 ATPases associated with a variety of cellular activities BKD09_RS42565 SM00530 Helix-turn-helix XRE-family like proteins BKD09_RS42585 SM00530 Helix-turn-helix XRE-family like proteins BKD09_RS42635 SM00954 Region found in RelA / SpoT proteins BKD09_RS42705 SM00849 Metallo-beta-lactamase superfamily BKD09_RS42765 SM00564 beta-propeller repeat BKD09_RS42825 SM00530 Helix-turn-helix XRE-family like proteins BKD09_RS42915 SM00344 helix_turn_helix ASNC type BKD09_RS42985 SM00530 Helix-turn-helix XRE-family like proteins BKD09_RS42995 SM00155 Phospholipase D. Active site motifs. BKD09_RS43045 SM00020 Trypsin-like serine protease BKD09_RS43140 SM01130 BKD09_RS43140 BKD09_RS43155 SM00354 helix_turn _helix lactose operon repressor BKD09_RS43190 SM00382 ATPases associated with a variety of cellular activities BKD09_RS43195 SM00382 ATPases associated with a variety of cellular activities BKD09_RS43260 SM00382 ATPases associated with a variety of cellular activities BKD09_RS43325 SM00421 helix_turn_helix, Lux Regulon BKD09_RS43330 SM00271 DnaJ molecular chaperone homology domain BKD09_RS43365 SM00382 ATPases associated with a variety of cellular activities BKD09_RS43480 SM00448 cheY-homologous receiver domain BKD09_RS43480 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS43485 SM00749 bacterial OsmY and nodulation domain BKD09_RS43515 SM00382 ATPases associated with a variety of cellular activities BKD09_RS43590 SM00382 ATPases associated with a variety of cellular activities BKD09_RS43720 SM00382 ATPases associated with a variety of cellular activities BKD09_RS43750 SM00893 Electron transfer flavoprotein domain BKD09_RS43900 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BKD09_RS43900 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BKD09_RS44015 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BKD09_RS44015 SM00091 PAS domain BKD09_RS44015 SM00387 Histidine kinase-like ATPases BKD09_RS44015 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS44020 SM00421 helix_turn_helix, Lux Regulon BKD09_RS44020 SM00448 cheY-homologous receiver domain BKD09_RS44025 SM00448 cheY-homologous receiver domain BKD09_RS44040 SM00382 ATPases associated with a variety of cellular activities BKD09_RS44065 SM00857 Resolvase, N terminal domain BKD09_RS44120 SM00773 Proposed nucleic acid binding domain BKD09_RS44225 SM00364 Leucine-rich repeats, bacterial type BKD09_RS44225 SM00369 Leucine-rich repeats, typical (most populated) subfamily BKD09_RS44390 SM00052 Putative diguanylate phosphodiesterase BKD09_RS44470 SM00357 Cold shock protein domain BKD09_RS44555 SM00470 ParB-like nuclease domain BKD09_RS44595 SM00857 Resolvase, N terminal domain BKD09_RS44615 SM00382 ATPases associated with a variety of cellular activities BKD09_RS44640 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS44640 SM00895 BKD09_RS44640 BKD09_RS44700 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen BKD09_RS44750 SM00530 Helix-turn-helix XRE-family like proteins BKD09_RS44825 SM00857 Resolvase, N terminal domain BKD09_RS44835 SM00382 ATPases associated with a variety of cellular activities BKD09_RS44845 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BKD09_RS44860 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BKD09_RS44865 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BKD09_RS44875 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BKD09_RS44890 SM00833 Cobalamin synthesis protein cobW C-terminal domain BKD09_RS44920 SM00861 Transketolase, pyrimidine binding domain BKD09_RS44925 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BKD09_RS44950 SM00671 Sel1-like repeats. BKD09_RS44970 SM00869 Autotransporter beta-domain BKD09_RS45000 SM00382 ATPases associated with a variety of cellular activities BKD09_RS45025 SM00829 Enoylreductase BKD09_RS45030 SM00052 Putative diguanylate phosphodiesterase BKD09_RS45030 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BKD09_RS45030 SM00091 PAS domain BKD09_RS45030 SM00267 diguanylate cyclase BKD09_RS45045 SM00267 diguanylate cyclase BKD09_RS45120 SM00382 ATPases associated with a variety of cellular activities BKD09_RS45180 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BKD09_RS45180 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS45220 SM00911 HWE histidine kinase BKD09_RS45220 SM01079 BKD09_RS45220 BKD09_RS45235 SM00988 UreE urease accessory protein, N-terminal domain BKD09_RS45250 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BKD09_RS45270 SM00382 ATPases associated with a variety of cellular activities BKD09_RS45275 SM00382 ATPases associated with a variety of cellular activities BKD09_RS45295 SM00487 DEAD-like helicases superfamily BKD09_RS45295 SM00490 helicase superfamily c-terminal domain BKD09_RS45300 SM00316 Ribosomal protein S1-like RNA-binding domain BKD09_RS45305 SM00357 Cold shock protein domain BKD09_RS45330 SM00858 BKD09_RS45330 BKD09_RS45365 SM00028 Tetratricopeptide repeats BKD09_RS45390 SM00382 ATPases associated with a variety of cellular activities BKD09_RS45440 SM01018 B12 binding domain BKD09_RS45490 SM00822 BKD09_RS45490 BKD09_RS45520 SM00346 helix_turn_helix isocitrate lyase regulation BKD09_RS45525 SM00382 ATPases associated with a variety of cellular activities BKD09_RS45530 SM00382 ATPases associated with a variety of cellular activities BKD09_RS45565 SM00347 helix_turn_helix multiple antibiotic resistance protein BKD09_RS45575 SM00382 ATPases associated with a variety of cellular activities BKD09_RS45580 SM00382 ATPases associated with a variety of cellular activities BKD09_RS45690 SM00100 Cyclic nucleotide-monophosphate binding domain BKD09_RS45730 SM00849 Metallo-beta-lactamase superfamily BKD09_RS45735 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS45740 SM00829 Enoylreductase BKD09_RS45750 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS45750 SM00895 BKD09_RS45750 BKD09_RS45760 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS45790 SM00382 ATPases associated with a variety of cellular activities BKD09_RS45805 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain BKD09_RS45815 SM00318 Staphylococcal nuclease homologues BKD09_RS45835 SM00830 Chorismate mutase type II BKD09_RS45925 SM00829 Enoylreductase BKD09_RS45935 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS45940 SM00421 helix_turn_helix, Lux Regulon BKD09_RS45940 SM00448 cheY-homologous receiver domain BKD09_RS45945 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BKD09_RS45945 SM00387 Histidine kinase-like ATPases BKD09_RS45945 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS45960 SM00911 HWE histidine kinase BKD09_RS45980 SM00448 cheY-homologous receiver domain BKD09_RS45990 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BKD09_RS45990 SM00091 PAS domain BKD09_RS45990 SM00220 Serine/Threonine protein kinases, catalytic domain BKD09_RS45990 SM00387 Histidine kinase-like ATPases BKD09_RS45990 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS46005 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS46045 SM00849 Metallo-beta-lactamase superfamily BKD09_RS46060 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BKD09_RS46100 SM00822 BKD09_RS46100 BKD09_RS46115 SM00829 Enoylreductase BKD09_RS46125 SM00849 Metallo-beta-lactamase superfamily BKD09_RS46145 SM00849 Metallo-beta-lactamase superfamily BKD09_RS46170 SM00829 Enoylreductase BKD09_RS46245 SM00028 Tetratricopeptide repeats BKD09_RS46260 SM00382 ATPases associated with a variety of cellular activities BKD09_RS46270 SM00382 ATPases associated with a variety of cellular activities BKD09_RS46285 SM00382 ATPases associated with a variety of cellular activities BKD09_RS46310 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain BKD09_RS46310 SM01080 BKD09_RS46310 BKD09_RS46330 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS46350 SM00382 ATPases associated with a variety of cellular activities BKD09_RS46355 SM00382 ATPases associated with a variety of cellular activities BKD09_RS46370 SM00382 ATPases associated with a variety of cellular activities BKD09_RS46410 SM00998 Adenylosuccinate lyase C-terminus BKD09_RS46415 SM00028 Tetratricopeptide repeats BKD09_RS46415 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS46430 SM00028 Tetratricopeptide repeats BKD09_RS46430 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS46440 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS46475 SM00382 ATPases associated with a variety of cellular activities BKD09_RS46515 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BKD09_RS46515 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS46520 SM00849 Metallo-beta-lactamase superfamily BKD09_RS46545 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKD09_RS46545 SM00895 BKD09_RS46545 BKD09_RS46560 SM00387 Histidine kinase-like ATPases BKD09_RS46560 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS46560 SM00448 cheY-homologous receiver domain BKD09_RS46565 SM00822 BKD09_RS46565 BKD09_RS46585 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS46590 SM00421 helix_turn_helix, Lux Regulon BKD09_RS46590 SM00448 cheY-homologous receiver domain BKD09_RS46655 SM00421 helix_turn_helix, Lux Regulon BKD09_RS46655 SM00448 cheY-homologous receiver domain BKD09_RS46760 SM00671 Sel1-like repeats. BKD09_RS46810 SM00347 helix_turn_helix multiple antibiotic resistance protein BKD09_RS46845 SM00028 Tetratricopeptide repeats BKD09_RS46855 SM00448 cheY-homologous receiver domain BKD09_RS46855 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS46860 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKD09_RS46860 SM00387 Histidine kinase-like ATPases BKD09_RS46860 SM00388 His Kinase A (phosphoacceptor) domain BKD09_RS46885 SM00838 Elongation factor G C-terminus BKD09_RS46900 SM00028 Tetratricopeptide repeats BKD09_RS46900 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS46960 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS46965 SM00862 Transcriptional regulatory protein, C terminal BKD09_RS46980 SM00052 Putative diguanylate phosphodiesterase BKD09_RS46980 SM00091 PAS domain BKD09_RS46980 SM00267 diguanylate cyclase BKD09_RS47005 SM00382 ATPases associated with a variety of cellular activities BKD09_RS47010 SM01091 Transporter associated domain BKD09_RS47025 SM00822 BKD09_RS47025 BKD09_RS47035 SM00342 helix_turn_helix, arabinose operon control protein BKD09_RS47085 SM00530 Helix-turn-helix XRE-family like proteins BKD09_RS47170 SM00530 Helix-turn-helix XRE-family like proteins BKD09_RS47235 SM00382 ATPases associated with a variety of cellular activities BKD09_RS47320 SM00382 ATPases associated with a variety of cellular activities BKD09_RS47440 SM00773 Proposed nucleic acid binding domain BKD09_RS47460 SM00530 Helix-turn-helix XRE-family like proteins BKD09_RS47500 SM00357 Cold shock protein domain BKD09_RS47540 SM00885 D5 N terminal like BKD09_RS47550 SM00943 Bifunctional DNA primase/polymerase, N-terminal BKD09_RS47635 SM00421 helix_turn_helix, Lux Regulon BKD09_RS47695 SM00382 ATPases associated with a variety of cellular activities BKD09_RS47730 SM00382 ATPases associated with a variety of cellular activities BKD09_RS47795 SM00729 Elongator protein 3, MiaB family, Radical SAM BKD09_RS47805 SM00411 bacterial (prokaryotic) histone like domain BKD09_RS48325 SM00419 helix_turn_helix, cAMP Regulatory protein BKD09_RS48340 SM00454 Sterile alpha motif. BKD09_RS48360 SM00448 cheY-homologous receiver domain BKD09_RS48440 SM00530 Helix-turn-helix XRE-family like proteins BKD09_RS49145 SM00421 helix_turn_helix, Lux Regulon BKD09_RS49440 SM00028 Tetratricopeptide repeats