locus strain_id interpro function go others BKD09_RS00025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000358|IPR012348 Ribonucleotide reductase small subunit|Ribonucleotide reductase-related GO:0009186|GO:0016491|GO:0055114 G3DSA:1.10.620.20|PF00268|PIRSF000355 BKD09_RS00030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000788|IPR008926|IPR013509 Ribonucleotide reductase R1 subunit, N-terminal|Ribonucleotide reductase large subunit, C-terminal|Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 G3DSA:3.20.70.20|PF00317|PF02867|PR01183|SSF48168|SSF51998 BKD09_RS00035 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025668 Transposase DDE domain PF13586 BKD09_RS00040 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13673|SSF55729 BKD09_RS00055 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 PF07508 BKD09_RS00075 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002514|IPR009057|IPR010921 Homeodomain-like|Transposase IS3/IS911family|Trp repressor/replication initiator GO:0003677|GO:0004803|GO:0006313|GO:0043565 G3DSA:1.10.10.60|PF01527|SSF48295 BKD09_RS00080 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001584|IPR012337|IPR025948 HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PF13276|SSF53098 BKD09_RS00085 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001128|IPR002397 Cytochrome P450|Cytochrome P450, B-class GO:0005506|GO:0016705|GO:0020037|GO:0055114 G3DSA:1.10.630.10|PF00067|PR00359|SSF48264 BKD09_RS00090 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|SSF46626 BKD09_RS00100 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR011991|IPR012337 Homeodomain-like|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677 G3DSA:1.10.10.10|G3DSA:3.30.420.10|PF13358|PF13565|SSF46689|SSF53098 BKD09_RS00105 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002611|IPR027417 IstB-like ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF01695|SSF52540 BKD09_RS00110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010354|IPR023753 FAD/NAD(P)-binding domain|Oleate hydratase GO:0006631|GO:0016491|GO:0050151|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF06100|SSF51905 BKD09_RS00115 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SM00822|SSF51735 BKD09_RS00120 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010451|IPR023375 Acetoacetate decarboxylase|Acetoacetate decarboxylase beta barrel domain GO:0016829 G3DSA:2.40.400.10|PF06314|SSF160104 BKD09_RS00130 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006119|IPR011109 DNA-binding recombinase domain|Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 G3DSA:3.40.50.1390|PF00239|PF07508|SM00857|SSF53041 BKD09_RS00135 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 PF07508 BKD09_RS00145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002509|IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF01522|SSF88713 BKD09_RS00150 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002514|IPR010921|IPR011991 Transposase IS3/IS911family|Trp repressor/replication initiator|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0004803|GO:0006313|GO:0043565 G3DSA:1.10.10.10|PF01527|SSF48295 BKD09_RS00155 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008878 Transposase IS66, Orf2 PF05717 BKD09_RS00160 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001638 Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF00497|SSF53850 BKD09_RS00165 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|SSF161098|TIGR01726 BKD09_RS00170 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF12844|SM00530|SSF47413 BKD09_RS00175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006913|IPR011057 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V|Mss4-like GO:0008152|GO:0016846 G3DSA:3.90.1590.10|SSF51316 BKD09_RS00180 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 PF01402 BKD09_RS00185 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003688|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 G3DSA:3.40.50.300|PF02534|SSF52540 BKD09_RS00190 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021795 Protein of unknown function DUF3363 PF11843 BKD09_RS00195 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008258|IPR023346 Lysozyme-like domain|Transglycosylase SLT domain 1 G3DSA:1.10.530.10|PF01464|SSF53955 BKD09_RS00200 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007948 Protein of unknown function DUF736 PF05284 BKD09_RS00205 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015927|IPR019533|IPR028360 Peptidase S24/S26, beta-ribbon domain|Peptidase S24/S26A/S26B/S26C|Peptidase S26 G3DSA:2.10.109.10|PF10502|SSF51306 BKD09_RS00210 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021263 Protein of unknown function DUF2840 PF11000 BKD09_RS00215 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010985|IPR013321 Arc-type ribbon-helix-helix|Ribbon-helix-helix GO:0006355 G3DSA:1.10.1220.10|SSF47598 BKD09_RS00220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002586|IPR027417 CobQ/CobB/MinD/ParA nucleotide binding domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF01656|PIRSF009320|SSF52540 BKD09_RS00225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018777 Replication initiator protein A PF10134 BKD09_RS00230 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009061|IPR011991 Putative DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF12728|SSF46955 BKD09_RS00235 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018754 Protein of unknown function DUF2285 PF10074 BKD09_RS00245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413 BKD09_RS00255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007948 Protein of unknown function DUF736 PF05284 BKD09_RS00270 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002059|IPR011129|IPR012156|IPR012340|IPR019844 Cold shock protein|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|SM00357|SSF50249 BKD09_RS00275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|SSF53335 BKD09_RS00290 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019627 Mycobacteriophage D29, Gp61 PF10686 BKD09_RS00295 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006171 Toprim domain PF13362 BKD09_RS00300 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003115 ParB/Sulfiredoxin G3DSA:3.90.1530.10|PF02195|SM00470|SSF109709|SSF110849 BKD09_RS00315 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009061|IPR011991 Putative DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF12728|SSF46955 BKD09_RS00320 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012337|IPR013520|IPR013620|IPR023607 Exodeoxyribonuclease I|Exonuclease C-terminal|Exonuclease, RNase T/DNA polymerase III|Ribonuclease H-like domain GO:0003676|GO:0004529|GO:0006281|GO:0008852 G3DSA:3.30.420.10|PF00929|PF08411|PIRSF000977|SM00479|SSF53098 BKD09_RS00325 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010359 HTH domain, IrrE-type PF06114 BKD09_RS00330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413 BKD09_RS00335 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018691 Protein of unknown function DUF2188 PF09954 BKD09_RS00355 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007560|IPR011856 Restriction endonuclease type IV, Mrr|tRNA endonuclease-like domain GO:0003676|GO:0003677|GO:0004518|GO:0004519|GO:0009307 G3DSA:3.40.1350.10|PF04471 BKD09_RS00370 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025333 Protein of unknown function DUF4239 PF14023 BKD09_RS00390 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002477 Peptidoglycan binding-like G3DSA:1.10.101.10|PF01471|SSF47090 BKD09_RS00395 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|SSF88659|SSF88946|TIGR02937 BKD09_RS00400 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005545|IPR011008 Dimeric alpha-beta barrel|YCII-related G3DSA:3.30.70.1060|PF03795|SSF54909 BKD09_RS00405 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003086|IPR016085|IPR021140 Alkaline proteinase inhibitor/ Outer membrane lipoprotein Omp19|Metalloprotease inhibitor I38|Protease inhibitor, beta-barrel domain GO:0004866|GO:0030288 G3DSA:2.40.128.10|PF02974|SSF50882 BKD09_RS00410 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006139|IPR006140|IPR016040 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF00389|PF02826|SSF51735|SSF52283 BKD09_RS00415 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS00420 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS00425 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015168 SsuA/THI5-like PF09084|SSF53850 BKD09_RS00430 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003785|IPR024087 Creatininase-like domain|Creatininase/formamide hydrolase G3DSA:3.40.50.10310|PF02633|SSF102215 BKD09_RS00440 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007049|IPR011250|IPR027385 Carbohydrate-selective porin OprB|Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0005215|GO:0006810|GO:0016021 G3DSA:2.40.160.20|PF04966|PF13505|SSF56925 BKD09_RS00445 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS00450 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR018632|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|C-terminal AAA-associated domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF09821|PS00211|SM00382|SSF52540 BKD09_RS00455 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000644|IPR002550|IPR005170|IPR016166|IPR016169 CBS domain|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|Domain of unknown function DUF21|FAD-binding, type 2|Transporter-associated domain GO:0003824|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.10.580.10|G3DSA:3.30.465.10|PF00571|PF01595|PF03471|SM01091|SSF54631|SSF56176 BKD09_RS00460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009875 PilZ domain GO:0035438 PF07238|SSF141371 BKD09_RS00465 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002932|IPR013785|IPR024188|IPR027283 Aldolase-type TIM barrel|Glutamate synthase domain|Glutamate synthase large subunit-like protein|Glutamate synthase large subunit-like protein, bacteria GO:0003824|GO:0006537|GO:0015930|GO:0016638|GO:0055114 G3DSA:3.20.20.70|PF01645|PIRSF006429|PIRSF500060|SSF51395 BKD09_RS00470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002641|IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase|Patatin/Phospholipase A2-related GO:0006629|GO:0008152 G3DSA:3.40.1090.10|PF01734|SSF52151 BKD09_RS00475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001433|IPR001709|IPR008333|IPR017938 Flavoprotein pyridine nucleotide cytochrome reductase|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.40.50.80|PF00175|PF00970|PR00371|SSF52343|SSF63380 BKD09_RS00480 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013651|IPR013815|IPR013816 ATP-grasp fold, RimK-type|ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2 GO:0003824|GO:0005524 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|PF08443|SSF56059 BKD09_RS00485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001638 Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF00497|SM00062|SSF53850 BKD09_RS00490 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 G3DSA:1.10.3860.10|PF00375|PR00173|SSF118215 BKD09_RS00495 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011032|IPR013149|IPR016040|IPR020843 Alcohol dehydrogenase, C-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF16884|SM00829|SSF50129|SSF51735 BKD09_RS00510 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002938|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain GO:0016491|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF01494|PR00420|SSF51905 BKD09_RS00515 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR011957|IPR025110 AMP-binding enzyme C-terminal domain|AMP-dependent synthetase/ligase|Benzoate-CoA ligase family GO:0003824|GO:0005524|GO:0008152|GO:0016405 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|SSF56801|TIGR02262 BKD09_RS00520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PR00598|SM00347|SSF46785 BKD09_RS00525 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004045|IPR005955|IPR010987|IPR012336 Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Maleylacetoacetate isomerase|Thioredoxin-like fold GO:0003824|GO:0005515|GO:0005737|GO:0009072 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF13410|PF13417|SSF47616|SSF52833|TIGR01262 BKD09_RS00530 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011051|IPR011960|IPR013096|IPR014710 Cupin 2, conserved barrel|Gentisate 1,2-dioxygenase|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182|TIGR02272 BKD09_RS00535 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS00540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS00545 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015168 SsuA/THI5-like G3DSA:3.40.190.10|PF09084|SSF53850 BKD09_RS00550 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000103|IPR023753 FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF12831|PR00469|SSF51905 BKD09_RS00555 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 BKD09_RS00560 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003660|IPR004089|IPR032255 HAMP domain|Helical bimodular sensor domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|SM00283|SM00304|SM01358|SSF58104 BKD09_RS00565 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004682|IPR018389 TRAP transporter solute receptor DctP/TeaA|TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 PF03480|PIRSF006470|SSF53850|TIGR00787 BKD09_RS00575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001753|IPR014748|IPR029045 ClpP/crotonase-like domain|Crontonase, C-terminal|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:1.10.12.10|G3DSA:3.90.226.10|PF00378|SSF52096 BKD09_RS00580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008927|IPR013328|IPR013332|IPR013752|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|Ketopantoate reductase, C-terminal domain|Ketopantoate reductase, N-terminal domain|NAD(P)-binding domain GO:0008677|GO:0016491|GO:0050661|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF02558|PF08546|SSF48179|SSF51735 BKD09_RS00585 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029058 Alpha/Beta hydrolase fold G3DSA:3.40.50.1820|SSF53474 BKD09_RS00590 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006089|IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase, conserved site|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PS00073|SSF47203|SSF56645 BKD09_RS00595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003313|IPR009057|IPR018060|IPR020449 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|Homeodomain-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PF14525|PR00032|SM00342|SSF46689 BKD09_RS00600 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|SSF53474 BKD09_RS00605 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000914|IPR023765|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain|Solute-binding protein family 5, conserved site GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PS01040|SSF53850 BKD09_RS00610 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006680|IPR011059|IPR020043|IPR032466 Amidohydrolase EF0837/AHA3915, putative|Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|PIRSF039004|SSF51338|SSF51556 BKD09_RS00615 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012413 BA14k family GO:0009405 PF07886 BKD09_RS00625 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|SSF54593 BKD09_RS00630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014845 Uncharacterised protein GYD PF08734 BKD09_RS00635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 BKD09_RS00640 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 BKD09_RS00645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein G3DSA:3.50.30.40|PF03737|SSF89562 BKD09_RS00650 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR025110 AMP-binding enzyme C-terminal domain|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|SSF56801 BKD09_RS00655 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029058 Alpha/Beta hydrolase fold G3DSA:3.40.50.1820|SSF53474 BKD09_RS00670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003710|IPR008927|IPR013328|IPR013332|IPR013752|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|Ketopantoate reductase ApbA/PanE|Ketopantoate reductase, C-terminal domain|Ketopantoate reductase, N-terminal domain|NAD(P)-binding domain GO:0005737|GO:0008677|GO:0015940|GO:0016491|GO:0050661|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF02558|PF08546|SSF48179|SSF51735|TIGR00745 BKD09_RS00675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009282|IPR027405 Protein of unknown function DUF937|YidB-like G3DSA:1.10.10.690|PF06078|SSF140804 BKD09_RS00680 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007341 Transglycosylase-associated protein GO:0016021 PF04226 BKD09_RS00685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SM00822|SSF51735 BKD09_RS00690 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|PF00441|SSF47203|SSF56645 BKD09_RS00695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006089|IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase, conserved site|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PS00072|SSF47203|SSF56645 BKD09_RS00700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001753|IPR018376|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily|Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|PS00166|SSF52096 BKD09_RS00705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase G3DSA:3.10.180.10|SSF54593 BKD09_RS00710 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001753|IPR014748|IPR018376|IPR029045 ClpP/crotonase-like domain|Crontonase, C-terminal|Crotonase superfamily|Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 G3DSA:1.10.12.10|G3DSA:3.90.226.10|PF00378|PS00166|SSF52096 BKD09_RS00715 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS00720 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016071 Staphylococcal nuclease (SNase-like), OB-fold G3DSA:2.40.50.90|PF00565|SM00318|SSF50199 BKD09_RS00725 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001915 Peptidase M48 GO:0004222|GO:0006508 G3DSA:3.30.2010.10|PF01435 BKD09_RS00730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002327|IPR009056 Cytochrome c, class IA/ IB|Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF00034|PR00604|SSF46626 BKD09_RS00735 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005829|IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain|Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PS00216|SSF103473 BKD09_RS00740 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002429|IPR006333|IPR008972|IPR010514|IPR011759 COX aromatic rich motif|Cupredoxin|Cytochrome C oxidase subunit II, transmembrane domain|Cytochrome c oxidase subunit II C-terminal|Cytochrome o ubiquinol oxidase subunit II GO:0004129|GO:0005507|GO:0008827|GO:0016020|GO:0016021|GO:0016682|GO:0022900|GO:0055114 G3DSA:1.10.287.90|G3DSA:2.60.40.420|PF00116|PF06481|SSF49503|SSF81464|TIGR01433 BKD09_RS00745 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000883|IPR014207|IPR023615|IPR023616 Cytochrome c oxidase subunit I|Cytochrome c oxidase, subunit I domain|Cytochrome c oxidase, subunit I, copper-binding site|Cytochrome o ubiquinol oxidase, subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0016682|GO:0020037|GO:0055114 G3DSA:1.20.210.10|PF00115|PR01165|PS00077|SSF81442|TIGR02843 BKD09_RS00750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000298|IPR013833|IPR014206 Cytochrome c oxidase subunit III domain|Cytochrome c oxidase, subunit III, 4-helical bundle|Cytochrome o ubiquinol oxidase, subunit III GO:0004129|GO:0005886|GO:0008827|GO:0015002|GO:0016020|GO:0019646|GO:0022904 G3DSA:1.20.120.80|PF00510|SSF81452|TIGR02842 BKD09_RS00755 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005171|IPR014210 Cytochrome C oxidase subunit IV, prokaryotes|Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 PF03626|TIGR02847 BKD09_RS00760 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002994 Surfeit locus 1/Shy1 GO:0016020 PF02104 BKD09_RS00765 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF02518|PR00344|SM00387|SSF47384|SSF55874 BKD09_RS00770 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR002197|IPR009057|IPR011006 CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0043565 G3DSA:1.10.10.60|G3DSA:3.40.50.2300|PF00072|PF02954|PR01590|SM00448|SSF46689|SSF52172 BKD09_RS00775 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS00785 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003711 CarD-like/TRCF domain PF02559|SM01058|SSF141259 BKD09_RS00790 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000813|IPR017896|IPR017900|IPR022569 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|7Fe ferredoxin|Ferredoxin, C-terminal GO:0009055 G3DSA:3.30.70.20|PF00037|PF11953|PR00354|PS00198|SSF54862 BKD09_RS00795 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002942 RNA-binding S4 domain GO:0003723 G3DSA:3.10.290.10|PF01479|SM00363|SSF55174 BKD09_RS00800 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001650|IPR027417 Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF00271|SM00490|SSF52540 BKD09_RS00805 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021457 Protein of unknown function DUF3108 PF11306 BKD09_RS00810 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001383|IPR026569 Ribosomal protein L28|Ribosomal protein L28/L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.30.170.40|MF_00373|PF00830|SSF143800|TIGR00009 BKD09_RS00815 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006935|IPR018310|IPR027417 Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Putative endonuclease, Z1 domain GO:0003677|GO:0005524|GO:0016787 G3DSA:3.40.50.300|PF04851|PF10593|SSF52540 BKD09_RS00825 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR017985|IPR029063 DNA methylase, N-4 cytosine-specific, conserved site|S-adenosyl-L-methionine-dependent methyltransferase GO:0003677|GO:0015667|GO:0090124 G3DSA:3.40.50.150|PR00507|PS00093|SSF53335 BKD09_RS00830 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023214 HAD-like domain G3DSA:3.40.50.1000|PF13419|SSF56784 BKD09_RS00845 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000158|IPR003008|IPR008280|IPR018316|IPR020805|IPR024757 Cell division protein FtsZ|Cell division protein FtsZ, C-terminal|Cell division protein FtsZ, conserved site|Tubulin/FtsZ, 2-layer sandwich domain|Tubulin/FtsZ, C-terminal|Tubulin/FtsZ, GTPase domain GO:0003924|GO:0005525|GO:0005737 G3DSA:3.30.1330.20|G3DSA:3.40.50.1440|MF_00909|PF00091|PF12327|PR00423|PS01134|PS01135|SM00864|SM00865|SSF52490|SSF55307|TIGR00065 BKD09_RS00860 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009875 PilZ domain GO:0035438 PF07238|SSF141371 BKD09_RS00870 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001155|IPR013785 Aldolase-type TIM barrel|NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0003824|GO:0010181|GO:0016491|GO:0055114 G3DSA:3.20.20.70|PF00724|SSF51395 BKD09_RS00880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014567|IPR027372 Phytase-like domain|Uncharacterised conserved protein UCP031900 PF13449|PIRSF031900 BKD09_RS00885 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002035|IPR006538|IPR025861 Cobalamin biosynthesis protein CobT VWA domain|Cobalt chelatase, CobT subunit|von Willebrand factor, type A GO:0009236 G3DSA:3.40.50.410|PF06213|PF11775|PIRSF031715|SM00327|SSF53300|TIGR01651 BKD09_RS00890 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 BKD09_RS00895 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006537|IPR011704|IPR013615|IPR025865|IPR027417 ATPase, dynein-related, AAA domain|CbbQ/NirQ/NorQ, C-terminal|Cobaltochelatase subunit CobS|Cobaltochelatase subunit CobS N-terminal domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF07728|PF08406|PF12556|SSF52540|TIGR01650 BKD09_RS00900 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032816 SNARE associated Golgi protein PF09335 BKD09_RS00905 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002020|IPR016142|IPR016143|IPR019810 Citrate synthase|Citrate synthase active site|Citrate synthase-like, large alpha subdomain|Citrate synthase-like, small alpha subdomain GO:0006099|GO:0046912 G3DSA:1.10.230.10|G3DSA:1.10.580.10|PF00285|PF12728|PR00143|PS00480|SSF48256 BKD09_RS00910 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002020|IPR016142|IPR016143|IPR019810|IPR024176 Citrate synthase|Citrate synthase active site|Citrate synthase, bacterial-type|Citrate synthase-like, large alpha subdomain|Citrate synthase-like, small alpha subdomain GO:0006099|GO:0046912 G3DSA:1.10.230.10|G3DSA:1.10.580.10|PF00285|PIRSF001369|PR00143|PS00480|SSF48256 BKD09_RS00915 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR003594|IPR011102|IPR013656 Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold-4|Signal transduction histidine kinase, HWE region GO:0004673 G3DSA:3.30.450.20|PF07536|PF08448|SM00911|SSF55785|SSF55874|TIGR00229 BKD09_RS00920 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001623 DnaJ domain G3DSA:1.10.287.110|PF00226|PR00625|SM00271|SSF46565 BKD09_RS00925 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002634 BolA protein G3DSA:3.30.70.1500|PF01722|PIRSF003113|SSF82657 BKD09_RS00930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001584|IPR009057|IPR012337 Homeodomain-like|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.60|G3DSA:3.30.420.10|PF00665|PF13565|SSF46689|SSF53098 BKD09_RS00935 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000644|IPR002550|IPR005170|IPR016166|IPR016169 CBS domain|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|Domain of unknown function DUF21|FAD-binding, type 2|Transporter-associated domain GO:0003824|GO:0016614|GO:0050660|GO:0055114 G3DSA:1.20.1250.20|G3DSA:3.10.580.10|G3DSA:3.30.465.10|PF00571|PF01595|PF03471|SM00116|SM01091|SSF54631|SSF56176 BKD09_RS00940 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016037|IPR030960|IPR030963 3-dehydroquinate synthase AroB|3-dehydroquinate synthase domain|3-dehydroquinate synthase family GO:0003856|GO:0005737|GO:0009073|GO:0016838 G3DSA:1.20.1090.10|G3DSA:3.40.50.1970|MF_00110|PF01761|PIRSF001455|SSF56796|TIGR01357 BKD09_RS00945 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000623|IPR023000|IPR027417|IPR031322 P-loop containing nucleoside triphosphate hydrolase|Shikimate kinase, conserved site|Shikimate kinase/Threonine synthase-like 1|Shikimate kinase/gluconokinase G3DSA:3.40.50.300|MF_00109|PF01202|PR01100|PS01128|SSF52540 BKD09_RS00955 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002104|IPR004107|IPR011010|IPR011932|IPR013762|IPR023009|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, SAM-like, N-terminal|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Tyrosine recombinase XerC/XerD|Tyrosine recombinase XerD GO:0003677|GO:0006310|GO:0009009|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|MF_01807|MF_01808|PF00589|PF02899|SSF56349|TIGR02225 BKD09_RS00960 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001095|IPR029045 Acetyl-CoA carboxylase, alpha subunit|ClpP/crotonase-like domain GO:0003989|GO:0006633|GO:0009317 G3DSA:3.90.226.10|MF_00823|PF03255|PR01069|SSF52096|TIGR00513 BKD09_RS00965 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic SSF141523 BKD09_RS00970 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS00975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|SM00382|SSF52540 BKD09_RS00980 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS00985 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000709|IPR019546|IPR028081|IPR028082 Leu/Ile/Val-binding protein|Leucine-binding protein domain|Periplasmic binding protein-like I|Twin-arginine translocation pathway, signal sequence, bacterial/archaeal GO:0006865 G3DSA:3.40.50.2300|PF13458|PR00337|SSF53822|TIGR01409 BKD09_RS00990 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS00995 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR020556|IPR023631 Amidase signature domain|Amidase, conserved site G3DSA:3.90.1300.10|PF01425|PS00571|SSF75304 BKD09_RS01000 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS01005 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|SM00347|SSF46785 BKD09_RS01010 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000185|IPR004027|IPR011115|IPR011116|IPR011130|IPR020937|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Protein translocase subunit SecA|SEC-C motif|SecA DEAD-like, N-terminal|SecA Wing/Scaffold|SecA conserved site|SecA preprotein, cross-linking domain GO:0005524|GO:0006605|GO:0006886|GO:0016020|GO:0017038 G3DSA:1.10.3060.10|G3DSA:3.40.50.300|G3DSA:3.90.1440.10|MF_01382|PF01043|PF02810|PF07516|PF07517|PR00906|PS01312|SM00957|SM00958|SSF52540|SSF81767|SSF81886|TIGR00963 BKD09_RS01015 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027304 Trigger factor/SurA domain G3DSA:3.10.50.40|PF13616|SSF109998|SSF54534 BKD09_RS01020 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002813|IPR016117 ArgJ-like domain|Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 G3DSA:3.60.70.12|MF_01106|PD004193|PF01960|SSF56266|TIGR00120 BKD09_RS01025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000086|IPR015797|IPR020476 NUDIX hydrolase|NUDIX hydrolase domain|NUDIX hydrolase domain-like GO:0016787 G3DSA:3.90.79.10|PF00293|PR00502|SSF55811 BKD09_RS01030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|SSF53335 BKD09_RS01035 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000836|IPR029057 Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0009116 G3DSA:3.40.50.2020|PF00156|SSF53271 BKD09_RS01040 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002109|IPR011900|IPR012336|IPR014025 Glutaredoxin|Glutaredoxin subgroup|Glutaredoxin, GrxC|Thioredoxin-like fold GO:0009055|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00462|PR00160|SSF52833|TIGR02181 BKD09_RS01045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001110|IPR003010 Carbon-nitrogen hydrolase|Uncharacterised protein family UPF0012, conserved site GO:0006807|GO:0016810 G3DSA:3.60.110.10|PF00795|PS01227|SSF56317 BKD09_RS01050 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009562 Protein of unknown function DUF1178 PF06676|PIRSF032131 BKD09_RS01055 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 BKD09_RS01060 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000305|IPR027299 GIY-YIG domain|GIY-YIG nuclease superfamily G3DSA:3.40.1440.10|PF01541|SM00465|SSF82771 BKD09_RS01065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010233|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 G3DSA:3.40.50.150|MF_00472|PF13489|SSF53335|TIGR01983 BKD09_RS01070 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005182 Domain of unknown function DUF304 PF03703 BKD09_RS01075 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001048|IPR001341|IPR002912|IPR005260|IPR018042|IPR027795 ACT domain|Aspartate kinase domain|Aspartate kinase, conserved site|Aspartate kinase, monofunctional class|Aspartate/glutamate/uridylate kinase|GATS-like ACT domain GO:0004072|GO:0008152|GO:0008652|GO:0009089|GO:0016597 G3DSA:3.30.70.260|G3DSA:3.40.1160.10|PF00696|PF01842|PF13840|PIRSF000726|PS00324|SSF53633|SSF55021|TIGR00656|TIGR00657 BKD09_RS01080 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000121|IPR003018|IPR006318|IPR008279|IPR008731|IPR015813|IPR023151|IPR029016 GAF domain|GAF domain-like|PEP-utilising enzyme, C-terminal|PEP-utilising enzyme, conserved site|PEP-utilising enzyme, mobile domain|Phosphotransferase system, enzyme I N-terminal|Phosphotransferase system, enzyme I-like|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0005515|GO:0009401|GO:0016310|GO:0016772 G3DSA:1.10.274.10|G3DSA:3.20.20.60|G3DSA:3.30.450.40|G3DSA:3.50.30.10|PF00391|PF01590|PF02896|PF05524|PR01736|PS00742|SM00065|SSF47831|SSF51621|SSF52009|SSF55781|TIGR01417 BKD09_RS01085 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000352|IPR004373|IPR005139|IPR014720 Double-stranded RNA-binding domain|Peptide chain release factor|Peptide chain release factor 1|Peptide chain release factor class I/class II GO:0003747|GO:0005737|GO:0006415|GO:0016149 G3DSA:1.20.58.410|G3DSA:3.30.160.20|MF_00093|PF00472|PF03462|PS00745|SM00937|SSF75620|TIGR00019 BKD09_RS01090 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12802|SM00347|SSF46785 BKD09_RS01100 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS01105 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS01110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851|IPR003439|IPR003593|IPR017871|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter, permease|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005215|GO:0005524|GO:0006810|GO:0016020|GO:0016887 G3DSA:3.40.50.300|PF00005|PF02653|PF12399|PS00211|SM00382|SSF52540 BKD09_RS01115 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS01125 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001310|IPR011146 HIT-like domain|Histidine triad (HIT) protein GO:0003824 G3DSA:3.30.428.10|PF01230|PR00332|SSF54197 BKD09_RS01130 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002052|IPR004556|IPR007848|IPR019874|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|Methyltransferase small domain|Modification methylase HemK|Protein-(glutamine-N5) methyltransferase, release factor-specific|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0006479|GO:0008168|GO:0008276|GO:0032259 G3DSA:1.10.8.10|G3DSA:3.40.50.150|MF_02126|PF05175|PR00507|PS00092|SSF53335|TIGR00536|TIGR03534 BKD09_RS01135 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025430 Domain of unknown function DUF4167 PF13763 BKD09_RS01140 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|SSF53335 BKD09_RS01145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279|IPR017782|IPR032282 Hydroxyacylglutathione hydrolase|Hydroxyacylglutathione hydrolase, C-terminal domain|Metallo-beta-lactamase GO:0004416|GO:0019243 G3DSA:3.60.15.10|MF_01374|PF00753|PF16123|PIRSF005457|SM00849|SSF56281|TIGR03413 BKD09_RS01150 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009327|IPR011051|IPR014710 Cupin domain of unknown function DUF985|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF06172|SSF51182 BKD09_RS01155 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 BKD09_RS01160 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR011283|IPR016040|IPR020904 Acetoacetyl-CoA reductase|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0005737|GO:0016491|GO:0018454|GO:0042619|GO:0055114 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SM00822|SSF51735|TIGR01829 BKD09_RS01165 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002155|IPR016039|IPR020610|IPR020613|IPR020615|IPR020616|IPR020617 Thiolase|Thiolase, C-terminal|Thiolase, N-terminal|Thiolase, active site|Thiolase, acyl-enzyme intermediate active site|Thiolase, conserved site|Thiolase-like GO:0003824|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00108|PF02803|PIRSF000429|PS00098|PS00099|PS00737|SSF53901|TIGR01930 BKD09_RS01170 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007897|IPR010134|IPR012909 PHA accumulation regulator DNA-binding, N-terminal|PHB accumulation regulatory|Polyhydroxyalkanoate synthesis repressor PhaR GO:0006355 PF05233|PF07879|TIGR01848 BKD09_RS01175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13649|SSF53335 BKD09_RS01180 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001544|IPR018300 Aminotransferase class IV|Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 G3DSA:3.20.10.10|G3DSA:3.30.470.10|PF01063|PS00770|SSF56752 BKD09_RS01185 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013094|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 G3DSA:3.40.50.1820|PF07859|SSF53474 BKD09_RS01205 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029032 AhpD-like G3DSA:1.20.1290.10|SSF69118 BKD09_RS01210 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme G3DSA:3.40.50.1100|PF00291|SSF53686 BKD09_RS01215 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000485|IPR011008|IPR011991|IPR019885|IPR019887|IPR019888 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Transcription regulator HTH, AsnC-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13412|PR00033|PS00519|SM00344|SSF46785|SSF54909 BKD09_RS01220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001926|IPR005965|IPR020601|IPR027278 1-aminocyclopropane-1-carboxylate deaminase|1-aminocyclopropane-1-carboxylate deaminase, bacterial|1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase|Tryptophan synthase beta subunit-like PLP-dependent enzyme GO:0008660|GO:0009310|GO:0030170 G3DSA:3.40.50.1100|MF_00807|PF00291|PIRSF006278|SSF53686|TIGR01274 BKD09_RS01225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001650|IPR002121|IPR004589|IPR006293|IPR010997|IPR011545|IPR011991|IPR014001|IPR018982|IPR027417|IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain|DEAD/DEAH box helicase domain|DNA helicase, ATP-dependent, RecQ type|DNA helicase, ATP-dependent, RecQ type, bacterial|HRDC domain|HRDC-like|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|RQC domain|Winged helix-turn-helix DNA-binding domain GO:0000166|GO:0003676|GO:0003824|GO:0004003|GO:0005524|GO:0005622|GO:0006260|GO:0006281|GO:0006310|GO:0008026|GO:0009432|GO:0043140|GO:0044237 G3DSA:1.10.10.10|G3DSA:1.10.150.80|G3DSA:3.40.50.300|PF00270|PF00271|PF00570|PF09382|PF16124|SM00341|SM00487|SM00490|SM00956|SSF47819|SSF52540|TIGR00614|TIGR01389 BKD09_RS01230 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002509|IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF01522|SSF88713 BKD09_RS01235 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005697|IPR029062 Class I glutamine amidotransferase-like|Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 G3DSA:3.40.50.880|PD037892|PF04204|SSF52317 BKD09_RS01240 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000277|IPR006235|IPR015421|IPR015422|IPR015424 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme|O-acetylhomoserine/O-acetylserine sulfhydrylase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0006520|GO:0016765|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01053|PIRSF001434|PS00868|SSF53383|TIGR01326 BKD09_RS01245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR020556|IPR023631 Amidase signature domain|Amidase, conserved site G3DSA:3.90.1300.10|PF01425|PIRSF001221|PS00571|SSF75304 BKD09_RS01250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005122 Uracil-DNA glycosylase-like G3DSA:3.40.470.10|PF03167|SSF52141 BKD09_RS01255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|SSF51338|SSF51556 BKD09_RS01260 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR020471|IPR023210 Aldo/keto reductase|NADP-dependent oxidoreductase domain GO:0016491|GO:0055114 G3DSA:3.20.20.100|PF00248|PR00069|SSF51430 BKD09_RS01265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS01270 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 BKD09_RS01275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 BKD09_RS01280 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 BKD09_RS01285 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023631 Amidase signature domain G3DSA:3.90.1300.10|PF01425|SSF75304 BKD09_RS01290 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|SSF46689|SSF48498 BKD09_RS01300 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801 BKD09_RS01305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023214 HAD-like domain G3DSA:3.40.50.1000|PF12710|SSF56784 BKD09_RS01310 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001128|IPR002397|IPR017972 Cytochrome P450|Cytochrome P450, B-class|Cytochrome P450, conserved site GO:0005506|GO:0016705|GO:0020037|GO:0055114 G3DSA:1.10.630.10|PF00067|PR00359|PS00086|SSF48264 BKD09_RS01315 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004812|IPR011701|IPR020846 Drug resistance transporter Bcr/CmlA subfamily|Major facilitator superfamily|Major facilitator superfamily domain GO:0005215|GO:0006810|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473|TIGR00710 BKD09_RS01320 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0008152|GO:0016758 G3DSA:3.40.50.2000|PF00201|SSF53756 BKD09_RS01330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014347|IPR028116 Putative oxalocrotonate tautomerase|Tautomerase/MIF superfamily G3DSA:3.30.429.10|PF14832|SSF55331 BKD09_RS01335 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|SSF51735 BKD09_RS01345 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003313|IPR009057|IPR018060 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PF14525|SM00342|SSF46689 BKD09_RS01350 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025285 Domain of unknown function DUF4145 PF13643 BKD09_RS01365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004473|IPR006935|IPR007409|IPR014001|IPR021810|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Protein of unknown function DUF3387|Restriction endonuclease, type I, HsdR|Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0005524|GO:0006304|GO:0009035|GO:0009307|GO:0016787 G3DSA:3.40.50.300|PF04313|PF04851|PF11867|SM00487|SSF52540|TIGR00348 BKD09_RS01370 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 PF01420|SSF116734 BKD09_RS01375 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002052|IPR003356|IPR022749|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|DNA methylase, adenine-specific|N6 adenine-specific DNA methyltransferase, N-terminal domain|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0003677|GO:0006306|GO:0008168|GO:0008170|GO:0032259 G3DSA:3.40.50.150|PF02384|PF12161|PR00507|PS00092|SSF53335 BKD09_RS01380 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025364 Domain of unknown function DUF4268 PF14088 BKD09_RS01385 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic SSF140990 BKD09_RS01400 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011250|IPR020915 Outer membrane protein/outer membrane enzyme PagP, beta-barrel|Uncharacterised protein family UPF0311 GO:0016021 G3DSA:2.40.160.20|PF11578 BKD09_RS01405 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010621|IPR010679 Domain of unknown function DUF1214|Domain of unknown function DUF1254 G3DSA:2.60.120.600|G3DSA:2.60.40.1610|PF06742|PF06863|SSF160935 BKD09_RS01415 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007936 Virulence-associated E PF05272 BKD09_RS01435 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002104|IPR011010|IPR013762|IPR025166 DNA breaking-rejoining enzyme, catalytic core|Domain of unknown function DUF4102|Integrase, catalytic domain|Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|PF13356|SSF56349 BKD09_RS01450 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 G3DSA:3.40.50.2000|PF00982|SSF53756 BKD09_RS01455 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003337|IPR006379|IPR023214 HAD-like domain|HAD-superfamily hydrolase, subfamily IIB|Trehalose-phosphatase GO:0003824|GO:0005992 G3DSA:3.40.50.1000|PF02358|SSF56784|TIGR00685|TIGR01484 BKD09_RS01460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005828|IPR020846 Major facilitator superfamily domain|Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1250.20|PF00083|SSF103473 BKD09_RS01470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003660|IPR004089|IPR032255 HAMP domain|Helical bimodular sensor domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|SM00283|SM00304|SM01358|SSF58104 BKD09_RS01475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003660|IPR004089|IPR004090|IPR032255 Chemotaxis methyl-accepting receptor|HAMP domain|Helical bimodular sensor domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PR00260|SM00283|SM00304|SM01358|SSF58104 BKD09_RS01480 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001041|IPR002888|IPR012675 2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|[2Fe-2S]-binding GO:0009055|GO:0016491|GO:0046872|GO:0051536|GO:0055114 G3DSA:1.10.150.120|G3DSA:3.10.20.30|PF00111|PF01799|SSF47741|SSF54292 BKD09_RS01485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000674|IPR008274 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF01315|PF02738|SM01008|SSF54665|SSF56003 BKD09_RS01490 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002346|IPR005107|IPR016166|IPR016167|IPR016169 CO dehydrogenase flavoprotein, C-terminal|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|Molybdopterin dehydrogenase, FAD-binding GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.30.390.50|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF00941|SM01092|SSF55447|SSF56176 BKD09_RS01495 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|SSF89796 BKD09_RS01500 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004360|IPR005956|IPR029068 4-hydroxyphenylpyruvate dioxygenase|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain GO:0003868|GO:0009072|GO:0016701|GO:0055114 G3DSA:3.10.180.10|PF00903|PF14696|PIRSF009283|SSF54593|TIGR01263 BKD09_RS01505 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000485|IPR011008|IPR011991|IPR019887|IPR019888 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13404|PR00033|SM00344|SSF46785|SSF54909 BKD09_RS01510 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010696 Protein of unknown function DUF1272 PF06906 BKD09_RS01515 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005959|IPR011234|IPR015377 Fumarylacetoacetase|Fumarylacetoacetase, C-terminal-related|Fumarylacetoacetase, N-terminal GO:0003824|GO:0004334|GO:0008152|GO:0009072 G3DSA:2.30.30.230|G3DSA:3.90.850.10|PF01557|PF09298|SSF56529|SSF63433|TIGR01266 BKD09_RS01520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005708|IPR011051|IPR014710|IPR022950 Homogentisate 1,2-dioxygenase|Homogentisate 1,2-dioxygenase, bacterial|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0004411|GO:0006559|GO:0006570|GO:0006572|GO:0055114 G3DSA:2.60.120.10|MF_00334|PF04209|SSF51182|TIGR01015 BKD09_RS01525 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|SM00849|SSF56281 BKD09_RS01530 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021233 Protein of unknown function DUF2783 PF10932 BKD09_RS01535 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002938|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain GO:0016491|GO:0055114|GO:0071949 G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01494|PR00420|SSF51905 BKD09_RS01540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000835|IPR011991|IPR023187 MarR-type HTH domain|Transcriptional regulator MarR-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12802|PR00598|PS01117|SM00347|SSF46785 BKD09_RS01545 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF01135|SSF53335 BKD09_RS01550 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|SM00849|SSF56281 BKD09_RS01555 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011990|IPR019734|IPR029030 Caspase-like domain|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|G3DSA:3.40.50.1460|PF00656|PF13432|SM00028|SSF48452|SSF52129 BKD09_RS01560 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006664|IPR006665|IPR006690 OmpA-like domain|Outer membrane protein, OmpA-like, conserved site|Outer membrane protein, bacterial GO:0009279|GO:0016021 G3DSA:3.30.1330.60|PF00691|PR01021|PS01068|SSF103088 BKD09_RS01565 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PF16576 BKD09_RS01570 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1320|G3DSA:3.30.70.1430|PF00873|PR00702|SSF82693|SSF82714|SSF82866 BKD09_RS01575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018488|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding, conserved site|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|PS00889|SM00100|SM00419|SSF46785|SSF51206 BKD09_RS01580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007844|IPR032712 AsmA|AsmA-like, C-terminal PF05170|PF13502 BKD09_RS01585 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR003018|IPR003660|IPR029016|IPR029787|IPR033479 Adenylyl cyclase class-3/4/guanylyl cyclase|Double Cache domain 1|GAF domain|GAF domain-like|HAMP domain|Nucleotide cyclase GO:0004871|GO:0005515|GO:0007165|GO:0009190|GO:0016021|GO:0016849|GO:0035556 G3DSA:3.30.450.20|G3DSA:3.30.450.40|G3DSA:3.30.70.1230|PF00211|PF00672|PF02743|PF13185|SM00044|SM00065|SM00304|SSF158472|SSF55073|SSF55781 BKD09_RS01595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012899 LTXXQ motif family protein GO:0042597 PF07813 BKD09_RS01600 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013783|IPR018392 Immunoglobulin-like fold|LysM domain G3DSA:2.60.40.10|G3DSA:3.10.350.10|PF01476|SM00257|SSF49478 BKD09_RS01605 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.130.10.10 BKD09_RS01610 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR000160|IPR001633|IPR029787 EAL domain|GGDEF domain|Nucleotide cyclase|PAS domain G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00563|PF00990|PF12860|SM00052|SM00267|SSF141868|SSF55073|SSF55785|TIGR00254 BKD09_RS01615 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic SSF54001 BKD09_RS01620 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012899 LTXXQ motif family protein GO:0042597 PF07813 BKD09_RS01640 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009962 Protein of unknown function DUF1488 PF07369|SSF160272 BKD09_RS01645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 MF_00358|PD005521|PF01165|TIGR00030 BKD09_RS01670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011045|IPR015943|IPR019405 Lactonase, 7-bladed beta propeller|Nitrous oxide reductase, N-terminal|WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.130.10.10|PF10282|SSF50974 BKD09_RS01675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:2.40.50.100|PF13437 BKD09_RS01680 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029030 Caspase-like domain G3DSA:3.40.50.1460|PF00656|SSF52129 BKD09_RS01690 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016071 Staphylococcal nuclease (SNase-like), OB-fold G3DSA:2.40.50.90|PF00565|SM00318|SSF50199 BKD09_RS01695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000192|IPR015421|IPR015422|IPR015424|IPR020578|IPR024169 Aminotransferase class V domain|Aminotransferase class-V, pyridoxal-phosphate binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|PIRSF000524|PS00595|SSF53383 BKD09_RS01705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004299|IPR024194|IPR028362 Alginate O-acetyltransferase AlgI|Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB|Membrane bound O-acyl transferase, MBOAT GO:0042121 PF03062|PIRSF016636|PIRSF500217 BKD09_RS01710 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001375|IPR002470|IPR023302|IPR029058 Alpha/Beta hydrolase fold|Peptidase S9, prolyl oligopeptidase, catalytic domain|Peptidase S9A, N-terminal domain|Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508|GO:0008236|GO:0070008 G3DSA:2.130.10.120|G3DSA:3.40.50.1820|PF00326|PF02897|PR00862|SSF50993|SSF53474 BKD09_RS01715 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005511|IPR011042|IPR013658 SMP-30/Gluconolactonase/LRE-like region|Senescence marker protein-30 (SMP-30)|Six-bladed beta-propeller, TolB-like G3DSA:2.120.10.30|PF08450|PR01790|SSF63829 BKD09_RS01720 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein G3DSA:3.50.30.40|PF03737|SSF89562 BKD09_RS01725 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000581|IPR015928|IPR020558 Aconitase/3-isopropylmalate dehydratase, swivel|Dihydroxy-acid/6-phosphogluconate dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 PF00920|PS00886|SSF143975|SSF52016 BKD09_RS01730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS01735 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS01740 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.40.190.10|PF13379|SSF53850 BKD09_RS01745 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|SM00345|SM00895|SSF46785|SSF48008 BKD09_RS01755 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 BKD09_RS01760 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR001610|IPR001789|IPR003594|IPR003660|IPR003661|IPR004358|IPR011006|IPR013655|IPR013767|IPR029151|IPR033479 CheY-like superfamily|Double Cache domain 1|HAMP domain|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold|PAS fold-3|Periplasmic sensor domain-like|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0004871|GO:0005515|GO:0006355|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF00672|PF00989|PF02518|PF02743|PF08447|PR00344|SM00086|SM00091|SM00304|SM00387|SM00388|SM00448|SSF103190|SSF47384|SSF52172|SSF55785|SSF55874|TIGR00229 BKD09_RS01765 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|SM00421|SM00448|SSF46894|SSF52172 BKD09_RS01775 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 BKD09_RS01785 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000780|IPR022641|IPR022642|IPR026024|IPR029063 Chemotaxis protein methyltransferase CheR|Chemotaxis receptor methyltransferase CheR, N-terminal|MCP methyltransferase, CheR-type|MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal|S-adenosyl-L-methionine-dependent methyltransferase GO:0008757 G3DSA:1.10.155.10|G3DSA:3.40.50.150|PF01739|PF03705|PIRSF000410|PR00996|SM00138|SSF47757|SSF53335 BKD09_RS01790 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 BKD09_RS01795 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 G3DSA:2.40.50.180|PF01584|SM00260|SSF50341 BKD09_RS01800 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR002545|IPR003594|IPR003661|IPR004105|IPR004358|IPR008207|IPR011006 CheW-like domain|CheY-like superfamily|Histidine kinase CheA-like, homodimeric domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0004673|GO:0004871|GO:0005737|GO:0006935|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.560|G3DSA:1.20.120.160|G3DSA:2.30.30.40|G3DSA:2.40.50.180|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF01584|PF01627|PF02518|PF02895|PR00344|SM00073|SM00260|SM00387|SM00448|SM01231|SSF47226|SSF47384|SSF50341|SSF52172|SSF55874 BKD09_RS01815 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF13545|SSF46785|SSF51206 BKD09_RS01820 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF13545|SSF46785|SSF51206 BKD09_RS01825 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 G3DSA:1.20.120.160|PF01627|SSF47226 BKD09_RS01835 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00196|PR00038|SM00421|SSF46894 BKD09_RS01845 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001633|IPR011254 EAL domain|Prismane-like GO:0003824|GO:0016491|GO:0055114 G3DSA:3.20.20.450|G3DSA:3.40.50.2300|PF00563|SM00052|SSF141868|SSF56821 BKD09_RS01850 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 BKD09_RS01855 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR004839|IPR011991|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0003824|GO:0006355|GO:0009058|GO:0030170 G3DSA:1.10.10.10|G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PF00392|SM00345|SSF46785|SSF53383 BKD09_RS01860 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025833 GDYXXLXY protein PF14345 BKD09_RS01865 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018677 Domain of unknown function DUF2157 PF09925 BKD09_RS01875 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|SSF54593 BKD09_RS01880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR002410|IPR005944|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Peptidase S33|Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508|GO:0008233 G3DSA:3.40.50.1820|PF00561|PIRSF006431|PR00111|PR00793|SSF53474|TIGR01249 BKD09_RS01885 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 BKD09_RS01890 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002938|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain GO:0016491|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF01494|PR00420|SSF51905 BKD09_RS01895 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS01900 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS01905 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|SM00382|SSF52540 BKD09_RS01910 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.40.190.10|PF13379|SSF53850 BKD09_RS01915 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004429|IPR019818|IPR024084 Isocitrate/isopropylmalate dehydrogenase, conserved site|Isopropylmalate dehydrogenase|Isopropylmalate dehydrogenase-like domain GO:0000287|GO:0003862|GO:0005737|GO:0009098|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.718.10|MF_01033|PF00180|PS00470|SM01329|SSF53659|TIGR00169 BKD09_RS01920 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000573|IPR004431|IPR015928 3-isopropylmalate dehydratase, small subunit|Aconitase A/isopropylmalate dehydratase small subunit, swivel domain|Aconitase/3-isopropylmalate dehydratase, swivel GO:0003861|GO:0008152|GO:0009098|GO:0009316 G3DSA:3.20.19.10|PF00694|SSF52016|TIGR00171 BKD09_RS01925 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001030|IPR004430|IPR015931|IPR015932|IPR018136 3-isopropylmalate dehydratase, large subunit|Aconitase family, 4Fe-4S cluster binding site|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0003861|GO:0008152|GO:0009098|GO:0051539 G3DSA:3.30.499.10|G3DSA:3.40.1060.10|MF_01026|PF00330|PR00415|PS00450|PS01244|SSF53732|TIGR00170 BKD09_RS01930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 BKD09_RS01935 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004027|IPR027417|IPR032710 NTF2-like domain|P-loop containing nucleoside triphosphate hydrolase|SEC-C motif G3DSA:3.10.450.50|G3DSA:3.40.50.300|PF02810|SSF103642|SSF52540 BKD09_RS01940 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014016|IPR027417 P-loop containing nucleoside triphosphate hydrolase|UvrD-like Helicase, ATP-binding domain GO:0005524 G3DSA:3.40.50.300|PF00580|SSF52540 BKD09_RS01945 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003959|IPR027417 ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF13304 BKD09_RS01960 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR000639|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Epoxide hydrolase-like GO:0003824 G3DSA:3.40.50.1820|PF00561|PR00111|PR00412|SSF53474 BKD09_RS01965 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000600 ROK family G3DSA:3.30.420.40|PF00480|SSF53067 BKD09_RS01970 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001787|IPR028909 Ribosomal protein L21|Ribosomal protein L21-like GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_01363|PF00829|SSF141091|TIGR00061 BKD09_RS01975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001684|IPR018261 Ribosomal protein L27|Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.40.50.100|MF_00539|PD003114|PF01016|PR00063|PS00831|SSF110324|TIGR00062 BKD09_RS01980 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13302|SSF55729 BKD09_RS01985 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 BKD09_RS01990 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002539|IPR029069 HotDog domain|MaoC-like domain G3DSA:3.10.129.10|PF01575|SSF54637 BKD09_RS01995 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006073|IPR006074|IPR006169|IPR014100|IPR027417 GTP binding domain|GTP-binding protein Obg/CgtA|GTP1/OBG domain|GTP1/OBG, conserved site|P-loop containing nucleoside triphosphate hydrolase GO:0000287|GO:0003924|GO:0005525 G3DSA:2.70.210.12|G3DSA:3.40.50.300|MF_01454|PF01018|PF01926|PIRSF002401|PR00326|PS00905|SSF52540|SSF82051|TIGR02729 BKD09_RS02000 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000917|IPR017849|IPR017850 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Sulfatase, N-terminal GO:0003824|GO:0008152|GO:0008484 G3DSA:3.30.1120.10|G3DSA:3.40.720.10|PF00884|SSF53649 BKD09_RS02005 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 BKD09_RS02010 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001048|IPR001057|IPR002478|IPR005715|IPR011529|IPR015947|IPR019797 Aspartate/glutamate/uridylate kinase|Glutamate 5-kinase|Glutamate 5-kinase, conserved site|Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase|Glutamate/acetylglutamate kinase|PUA domain|PUA-like domain GO:0003723|GO:0004349|GO:0005737|GO:0006561 G3DSA:2.30.130.10|G3DSA:3.40.1160.10|MF_00456|PF00696|PF01472|PIRSF000729|PR00474|PS00902|SM00359|SSF53633|SSF88697|TIGR01027 BKD09_RS02015 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000965|IPR012134|IPR015590|IPR016161|IPR016162|IPR016163|IPR020593 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde/histidinol dehydrogenase|GPR domain|Gamma-glutamyl phosphate reductase GPR, conserved site|Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0008152|GO:0016491|GO:0016620|GO:0050661|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|MF_00412|PF00171|PIRSF000151|PS01223|SSF53720|TIGR00407 BKD09_RS02020 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004821|IPR005248|IPR014729 Cytidyltransferase-like domain|Probable nicotinate-nucleotide adenylyltransferase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0009058|GO:0009435|GO:0016779 G3DSA:3.40.50.620|MF_00244|PF01467|SSF52374|TIGR00482 BKD09_RS02025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004394 Protein Iojap/ribosomal silencing factor RsfS G3DSA:3.30.460.10|MF_01477|PF02410|SSF81301|TIGR00090 BKD09_RS02030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003742|IPR029026|IPR029028 Alpha/beta knot methyltransferases|SPOUT methyltransferase, predicted|tRNA (guanine-N1-)-methyltransferase, N-terminal GO:0005737|GO:0006364|GO:0008168 G3DSA:3.40.1280.10|MF_00658|PF02590|PIRSF004505|SSF75217 BKD09_RS02035 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011055|IPR016047 Duplicated hybrid motif|Peptidase M23 G3DSA:2.70.70.10|PF01551|SSF51261 BKD09_RS02040 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001478|IPR004447|IPR005151|IPR029045 C-terminal-processing peptidase S41A|ClpP/crotonase-like domain|PDZ domain|Tail specific protease GO:0005515|GO:0006508|GO:0008236 G3DSA:2.30.42.10|G3DSA:3.30.750.44|G3DSA:3.90.226.10|PF03572|PF13180|SM00228|SM00245|SSF50156|SSF52096|TIGR00225 BKD09_RS02045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002509|IPR006837|IPR011330 Divergent polysaccharide deacetylase|Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF04748|SSF88713 BKD09_RS02050 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000086|IPR015797|IPR022927 NUDIX hydrolase domain|NUDIX hydrolase domain-like|RNA pyrophosphohydrolase RppH GO:0016787 G3DSA:3.90.79.10|MF_00298|PF00293|SSF55811 BKD09_RS02055 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000086|IPR015797|IPR020476 NUDIX hydrolase|NUDIX hydrolase domain|NUDIX hydrolase domain-like GO:0016787 G3DSA:3.90.79.10|PF00293|PR00502|SSF55811 BKD09_RS02060 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|Nucleotide cyclase GO:0009190|GO:0016849|GO:0035556 G3DSA:3.30.70.1230|PF00211|SSF55073 BKD09_RS02065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001469|IPR020546 ATPase, F1 complex, delta/epsilon subunit|ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 G3DSA:2.60.15.10|MF_00530|PD000944|PF02823|SSF51344|TIGR01216 BKD09_RS02070 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000194|IPR000793|IPR003593|IPR004100|IPR005722|IPR020003|IPR024034|IPR027417 AAA+ ATPase domain|ATPase, F1 complex alpha/beta subunit, N-terminal domain|ATPase, F1 complex beta subunit/V1 complex, C-terminal|ATPase, F1 complex, beta subunit|ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015986|GO:0015991|GO:0015992|GO:0016820|GO:0033178|GO:0046034|GO:0046933 G3DSA:1.10.1140.10|G3DSA:2.40.10.170|G3DSA:3.40.50.300|MF_01347|PF00006|PF02874|PIRSF039072|PS00152|SM00382|SSF47917|SSF50615|SSF52540|TIGR01039 BKD09_RS02075 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000131|IPR023632|IPR023633 ATPase, F1 complex, gamma subunit|ATPase, F1 complex, gamma subunit conserved site|ATPase, F1 complex, gamma subunit domain GO:0015986|GO:0045261|GO:0046933|GO:0046961 G3DSA:1.10.287.80|G3DSA:3.40.1380.10|MF_00815|PF00231|PIRSF039089|PR00126|PS00153|SSF52943|TIGR01146 BKD09_RS02080 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000194|IPR000793|IPR004100|IPR005294|IPR020003|IPR023366|IPR027417 ATP synthase subunit alpha-like domain|ATPase, F1 complex alpha/beta subunit, N-terminal domain|ATPase, F1 complex, alpha subunit|ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015986|GO:0015991|GO:0015992|GO:0016820|GO:0033178|GO:0045261|GO:0046034|GO:0046933|GO:0046961 G3DSA:1.20.150.20|G3DSA:2.40.30.20|G3DSA:3.40.50.300|MF_01346|PF00006|PF00306|PF02874|PIRSF039088|PS00152|SSF47917|SSF50615|SSF52540|TIGR00962 BKD09_RS02085 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000711|IPR020781|IPR026015 ATPase, OSCP/delta subunit|ATPase, OSCP/delta subunit, conserved site|F1F0 ATP synthase OSCP/delta subunit, N-terminal domain GO:0015986|GO:0016020|GO:0046933 G3DSA:1.10.520.20|MF_01416|PF00213|PR00125|PS00389|SSF47928|TIGR01145 BKD09_RS02090 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009009|IPR012997 Rare lipoprotein A|RlpA-like protein, double-psi beta-barrel domain PF03330|SSF50685|TIGR00413 BKD09_RS02095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001650|IPR005259|IPR011545|IPR014001|IPR027417 DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Primosomal protein N' GO:0003676|GO:0003677|GO:0004003|GO:0005524|GO:0006260|GO:0032508 G3DSA:3.40.50.300|MF_00983|PF00270|PF00271|SM00487|SM00490|SSF161219|SSF52540|TIGR00595 BKD09_RS02100 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002104|IPR004107|IPR010998|IPR011010|IPR013762|IPR023009|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, Lambda-type, N-terminal|Integrase, SAM-like, N-terminal|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Tyrosine recombinase XerC/XerD GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|MF_01808|PF00589|PF02899|SSF47823|SSF56349 BKD09_RS02105 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025570 Protein of unknown function DUF4337 PF14235 BKD09_RS02115 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004099|IPR006258|IPR012999|IPR016156|IPR023753 Dihydrolipoamide dehydrogenase|FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, class I, active site|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0004148|GO:0016491|GO:0016668|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF02852|PF07992|PIRSF000350|PR00368|PR00411|PS00076|SSF51905|SSF55424|TIGR01350 BKD09_RS02120 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SSF51735 BKD09_RS02130 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000089|IPR001078|IPR003016|IPR004167|IPR006255|IPR011053|IPR023213 2-oxo acid dehydrogenase, lipoyl-binding site|2-oxoacid dehydrogenase acyltransferase, catalytic domain|Biotin/lipoyl attachment|Chloramphenicol acetyltransferase-like domain|Dihydrolipoamide succinyltransferase|E3-binding domain|Single hybrid motif GO:0004149|GO:0006099|GO:0008152|GO:0016746|GO:0045252 G3DSA:2.40.50.100|G3DSA:3.30.559.10|G3DSA:4.10.320.10|PF00198|PF00364|PF02817|PS00189|SSF47005|SSF51230|SSF52777|TIGR01347 BKD09_RS02135 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001017|IPR005475|IPR011603|IPR029061|IPR031717|IPR032106 2-oxoglutarate dehydrogenase E1 component|2-oxoglutarate dehydrogenase E1 component, N-terminal domain|Dehydrogenase, E1 component|Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal|Thiamin diphosphate-binding fold|Transketolase-like, pyrimidine-binding domain GO:0004591|GO:0006099|GO:0008152|GO:0016624|GO:0030976|GO:0055114 G3DSA:3.40.50.970|PF00676|PF02779|PF16078|PF16870|PIRSF000157|SM00861|SSF52518|TIGR00239 BKD09_RS02140 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003781|IPR005810|IPR005811|IPR016040|IPR016102|IPR017440 ATP-citrate lyase/succinyl-CoA ligase|ATP-citrate lyase/succinyl-CoA ligase, active site|CoA-binding|NAD(P)-binding domain|Succinyl-CoA ligase, alpha subunit|Succinyl-CoA synthetase-like GO:0003824|GO:0008152|GO:0048037 G3DSA:3.40.50.261|G3DSA:3.40.50.720|PF00549|PF02629|PIRSF001553|PR01798|PS00399|PS01216|SM00881|SSF51735|SSF52210|TIGR01019 BKD09_RS02145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011473 Protein of unknown function DUF1579 PF07617 BKD09_RS02150 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005809|IPR005811|IPR013650|IPR013815|IPR013816|IPR016102 ATP-citrate lyase/succinyl-CoA ligase|ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|ATP-grasp fold, succinyl-CoA synthetase-type|Succinyl-CoA synthetase, beta subunit|Succinyl-CoA synthetase-like GO:0003824|GO:0005524|GO:0008152 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.261|MF_00558|PF00549|PF08442|PIRSF001554|SSF52210|SSF56059|TIGR01016 BKD09_RS02155 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001236|IPR001557|IPR011275|IPR015955|IPR016040|IPR022383 L-lactate/malate dehydrogenase|Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal|Lactate/malate dehydrogenase, C-terminal|Lactate/malate dehydrogenase, N-terminal|Malate dehydrogenase, type 3|NAD(P)-binding domain GO:0003824|GO:0005975|GO:0016491|GO:0016616|GO:0019752|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.110.10|MF_00487|PF00056|PF02866|PIRSF000102|PR00086|SSF51735|SSF56327|TIGR01763 BKD09_RS02160 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005654|IPR027417 ATPase, AFG1-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF03969|SSF52540 BKD09_RS02165 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004175|IPR009097 RNA 2',3'-cyclic phosphodiesterase|RNA ligase/cyclic nucleotide phosphodiesterase GO:0004113|GO:0008664 G3DSA:3.90.1140.10|MF_01940|PF13563|SSF55144|TIGR02258 BKD09_RS02170 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008265|IPR013830 Lipase, GDSL, active site|SGNH hydrolase-type esterase domain GO:0006629|GO:0016298 G3DSA:3.40.50.1110|PF13472|PS01098|SSF52266 BKD09_RS02175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS02180 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003838 ABC transporter permease protein domain GO:0016020 PF02687 BKD09_RS02185 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic PF01027 BKD09_RS02190 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001584|IPR009057|IPR012337 Homeodomain-like|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.60|G3DSA:3.30.420.10|PF00665|PF13565|SSF46689|SSF53098 BKD09_RS02195 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|PF13420|SSF55729 BKD09_RS02200 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021252 Protein of unknown function DUF2794 PF10984 BKD09_RS02205 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010634|IPR012336 Protein of unknown function DUF1223|Thioredoxin-like fold PF06764|SSF52833 BKD09_RS02210 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000573|IPR001030|IPR006249|IPR015928|IPR015931|IPR015932|IPR018136 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain|Aconitase family, 4Fe-4S cluster binding site|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2|Aconitase/3-isopropylmalate dehydratase, swivel|Aconitase/Iron-responsive element-binding protein 2 GO:0008152 G3DSA:3.20.19.10|G3DSA:3.30.499.10|G3DSA:3.40.1060.10|PF00330|PF00694|PR00415|PS00450|PS01244|SSF52016|SSF53732|TIGR01341 BKD09_RS02215 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR005895|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter, haem export, CcmA|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005215|GO:0005524|GO:0016887|GO:0017004|GO:0030288 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540|TIGR01189 BKD09_RS02220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003544|IPR026031 Cytochrome c-type biogenesis protein CcmB|Cytochrome c-type biogenesis protein CcmB, bacteria GO:0015232|GO:0015886|GO:0016020|GO:0017004 PF03379|PIRSF002764|PR01414|TIGR01190 BKD09_RS02225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002541|IPR003557 Cytochrome c assembly protein|Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004|GO:0020037 PF01578|PR01386|TIGR01191 BKD09_RS02230 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 PF04995|TIGR03141 BKD09_RS02235 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004799|IPR012336|IPR013740|IPR017937 Periplasmic protein thiol:disulphide oxidoreductase DsbE|Redoxin|Thioredoxin, conserved site|Thioredoxin-like fold GO:0015036|GO:0016491|GO:0017004|GO:0030288|GO:0045454 G3DSA:3.40.30.10|PF08534|PS00194|SSF52833|TIGR00385 BKD09_RS02240 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006008 Intracellular septation protein A GO:0016021 MF_00189|PF04279|TIGR00997 BKD09_RS02245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000897|IPR003593|IPR004390|IPR013822|IPR027417 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase|Signal recognition particle, SRP54 subunit, GTPase domain|Signal recognition particle, SRP54 subunit, helical bundle|Signal-recognition particle receptor FtsY GO:0005525|GO:0006614 G3DSA:1.20.120.140|G3DSA:3.40.50.300|MF_00920|PF00448|PF02881|PS00300|SM00382|SM00962|SM00963|SSF47364|SSF52540|TIGR00064 BKD09_RS02250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006145|IPR006224|IPR020103 Pseudouridine synthase, RluC/RluD, conserved site|Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PF00849|PS01129|SSF55120 BKD09_RS02255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019285 Protein of unknown function DUF2336 PF10098 BKD09_RS02260 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004101|IPR005839|IPR006467|IPR006638|IPR007197|IPR013848|IPR020612|IPR023404 Elongator protein 3/MiaB/NifB|Methylthiotransferase|Methylthiotransferase, N-terminal|Methylthiotransferase, conserved site|MiaB-like tRNA modifying enzyme|Mur ligase, C-terminal|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0005524|GO:0009058|GO:0009451|GO:0016740|GO:0016874|GO:0043412|GO:0051536|GO:0051539 G3DSA:3.80.30.20|G3DSA:3.90.190.20|PF00919|PF04055|PS01278|SM00729|SSF102114|TIGR00089|TIGR01579 BKD09_RS02265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001653|IPR018510 Diaminopimelate epimerase, DapF|Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 G3DSA:3.10.310.10|MF_00197|PF01678|PS01326|SSF54506|TIGR00652 BKD09_RS02270 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010499|IPR011256|IPR029442 Bacterial transcription activator, effector binding|GyrI-like small molecule binding domain|Regulatory factor, effector binding domain G3DSA:3.20.80.10|PF06445|SM00871|SSF55136 BKD09_RS02275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007497 Protein of unknown function DUF541 PF04402 BKD09_RS02280 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF12706|SSF56281 BKD09_RS02285 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000897|IPR003593|IPR004125|IPR004780|IPR013822|IPR022941|IPR027417 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase|Signal recognition particle protein Ffh|Signal recognition particle, SRP54 subunit|Signal recognition particle, SRP54 subunit, GTPase domain|Signal recognition particle, SRP54 subunit, M-domain|Signal recognition particle, SRP54 subunit, helical bundle GO:0003924|GO:0005525|GO:0006614|GO:0008312|GO:0048500 G3DSA:1.10.260.30|G3DSA:1.20.120.140|G3DSA:3.40.50.300|MF_00306|PF00448|PF02881|PF02978|PS00300|SM00382|SM00962|SM00963|SSF47446|SSF52540|TIGR00959 BKD09_RS02290 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000307|IPR023803 Ribosomal protein S16|Ribosomal protein S16 domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.1320.10|MF_00385|PF00886|SSF54565|TIGR00002 BKD09_RS02295 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002676|IPR009000|IPR011033|IPR011961|IPR027275 16S rRNA processing protein RimM|PRC-barrel domain|PRC-barrel-like|RimM protein|Translation protein, beta-barrel domain GO:0005840|GO:0006364|GO:0043022 G3DSA:2.30.30.240|G3DSA:2.40.30.60|MF_00014|PF01782|PF05239|SSF50346|SSF50447|TIGR02273 BKD09_RS02300 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002649|IPR016009|IPR023148|IPR029026|IPR029028 Alpha/beta knot methyltransferases|tRNA (guanine-N1-)-methyltransferase, C-terminal|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA (guanine-N1-)-methyltransferase, bacteria|tRNA methyltransferase TRMD/TRM10-type domain GO:0008033|GO:0052906 G3DSA:1.10.1270.20|G3DSA:3.40.1280.10|MF_00605|PF01746|PIRSF000386|SSF75217|TIGR00088 BKD09_RS02305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001857|IPR008991|IPR018257 Ribosomal protein L19|Ribosomal protein L19, conserved site|Translation protein SH3-like domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00402|PF01245|PIRSF002191|PR00061|PS01015|SSF50104|TIGR01024 BKD09_RS02310 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001030|IPR004430|IPR015931|IPR015932|IPR018136 3-isopropylmalate dehydratase, large subunit|Aconitase family, 4Fe-4S cluster binding site|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0003861|GO:0008152|GO:0009098|GO:0051539 G3DSA:3.30.499.10|G3DSA:3.40.1060.10|MF_01026|PF00330|PR00415|PS00450|PS01244|SSF53732|TIGR00170 BKD09_RS02325 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010753|IPR011008 Dimeric alpha-beta barrel|Domain of unknown function DUF1330 G3DSA:3.30.70.900|PF07045|SSF54909 BKD09_RS02340 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010428|IPR024079 Metallopeptidase, catalytic domain|Zinicin-like metallopeptidase GO:0008237 G3DSA:3.40.390.10|PF06262|SSF55486 BKD09_RS02345 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF13560|SM00530|SSF47413 BKD09_RS02350 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011576|IPR012349 FMN-binding split barrel|Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF01243|SSF50475 BKD09_RS02355 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000573|IPR004431|IPR015928 3-isopropylmalate dehydratase, small subunit|Aconitase A/isopropylmalate dehydratase small subunit, swivel domain|Aconitase/3-isopropylmalate dehydratase, swivel GO:0003861|GO:0008152|GO:0009098|GO:0009316 G3DSA:3.20.19.10|MF_01031|PF00694|SSF52016|TIGR00171 BKD09_RS02370 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029030 Caspase-like domain G3DSA:3.40.50.1460|PF00656|SSF52129 BKD09_RS02375 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|SM00100|SM00419|SSF46785|SSF51206 BKD09_RS02380 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005000|IPR011206|IPR015813 Citrate lyase beta subunit-like|HpcH/HpaI aldolase/citrate lyase domain|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 G3DSA:3.20.20.60|PF03328|PIRSF015582|SSF51621 BKD09_RS02385 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001765|IPR015892 Carbonic anhydrase|Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 G3DSA:3.40.1050.10|PF00484|PS00705|SM00947|SSF53056 BKD09_RS02390 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000319|IPR000534|IPR005986|IPR012080|IPR012280|IPR016040 Aspartate-semialdehyde dehydrogenase|Aspartate-semialdehyde dehydrogenase, beta-type|Aspartate-semialdehyde dehydrogenase, conserved site|NAD(P)-binding domain|Semialdehyde dehydrogenase, NAD-binding|Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0004073|GO:0005737|GO:0006520|GO:0008652|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0016620|GO:0046983|GO:0050661|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_02121|PF01118|PF02774|PIRSF000148|PS01103|SM00859|SSF51735|SSF55347|TIGR01296 BKD09_RS02405 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001451|IPR011004|IPR017694|IPR018357 Hexapeptide repeat|Hexapeptide transferase, conserved site|Phosphonate metabolim protein, transferase hexapeptide repeat family|Trimeric LpxA-like GO:0016740 G3DSA:2.160.10.10|PF00132|PS00101|SSF51161|TIGR03308 BKD09_RS02410 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004429|IPR019818|IPR024084 Isocitrate/isopropylmalate dehydrogenase, conserved site|Isopropylmalate dehydrogenase|Isopropylmalate dehydrogenase-like domain GO:0000287|GO:0003862|GO:0005737|GO:0009098|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.718.10|MF_01033|PF00180|PS00470|SM01329|SSF53659|TIGR00169 BKD09_RS02415 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010645|IPR020846 Major facilitator superfamily domain|Uncharacterised MFS-type transporter YbfB G3DSA:1.20.1250.20|PF06779|SSF103473 BKD09_RS02420 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 G3DSA:3.90.420.10|PF00174|SSF56524 BKD09_RS02425 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000516|IPR011577|IPR016174 Cytochrome b561, bacterial/Ni-hydrogenase|Di-haem cytochrome, transmembrane|Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020|GO:0016021|GO:0022904 G3DSA:1.20.950.20|PF01292|PR00161|SSF81342 BKD09_RS02430 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000782 FAS1 domain G3DSA:2.30.180.10|PF02469|SM00554|SSF82153 BKD09_RS02435 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF00106|PR00080|PR00081|SSF51735 BKD09_RS02440 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801 BKD09_RS02450 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925 BKD09_RS02455 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000701|IPR014314|IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site|Succinate dehydrogenase, cytochrome b556 subunit|Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0000104|GO:0006099|GO:0009055|GO:0016020|GO:0016627|GO:0045281 G3DSA:1.20.1300.10|PF01127|PIRSF000178|PS01000|PS01001|SSF81343|TIGR02970 BKD09_RS02460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000701|IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor|Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0000104|GO:0006099|GO:0016021|GO:0016627|GO:0020037 G3DSA:1.20.1300.10|PF01127|SSF81343|TIGR02968 BKD09_RS02465 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003952|IPR003953|IPR011281|IPR014006|IPR015939|IPR023753|IPR027477|IPR030664 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain|Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal|Fumarate reductase/succinate dehydrogenase, FAD-binding site|Succinate dehydrogenase, flavoprotein subunit|Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain|Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit|Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0006099|GO:0016491|GO:0016627|GO:0022900|GO:0050660|GO:0055114 G3DSA:1.20.58.100|G3DSA:3.50.50.60|G3DSA:3.90.700.10|G3DSA:4.10.80.40|PF00890|PF02910|PIRSF000171|PS00504|SSF46977|SSF51905|SSF56425|TIGR01812|TIGR01816 BKD09_RS02470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001041|IPR004489|IPR006058|IPR009051|IPR012675|IPR017900|IPR025192 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|Alpha-helical ferredoxin|Beta-grasp domain|Succinate dehydogenase/fumarate reductase N-terminal|Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0009055|GO:0016491|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.1060.10|G3DSA:3.10.20.30|PF13085|PF13534|PS00197|PS00198|SSF46548|SSF54292|TIGR00384 BKD09_RS02475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR003594|IPR003661|IPR004358|IPR011006 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PR00344|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55874 BKD09_RS02480 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR025662|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase|Sigma-54 interaction domain, ATP-binding site 1 GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF06472|PS00211|PS00675|SM00382|SSF52540|SSF90123 BKD09_RS02485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006342|IPR029063 Methyltransferase FkbM|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF05050|SSF53335|TIGR01444 BKD09_RS02490 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|SSF54593 BKD09_RS02515 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003726 Homocysteine-binding domain G3DSA:3.20.20.330|PF02574|SSF82282 BKD09_RS02520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001952|IPR017849|IPR017850 Alkaline phosphatase|Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152|GO:0016791 G3DSA:3.40.720.10|PF00245|PR00113|SM00098|SSF53649 BKD09_RS02525 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001518|IPR014729|IPR018223|IPR024073|IPR024074 Argininosuccinate synthase|Argininosuccinate synthase, conserved site|Argininosuccinate synthetase mutimerisation domain, C-terminal tail|Argininosuccinate synthetase, catalytic/multimerisation domain body|Rossmann-like alpha/beta/alpha sandwich fold GO:0004055|GO:0005524|GO:0006526|GO:0042803 G3DSA:1.10.287.400|G3DSA:3.40.50.620|G3DSA:3.90.1260.10|PF00764|PS00564|PS00565|SSF52402|SSF69864|TIGR00032 BKD09_RS02530 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase G3DSA:1.20.144.10|PF01569|SM00014|SSF48317 BKD09_RS02540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004383|IPR006638|IPR007197|IPR013785|IPR027492 Aldolase-type TIM barrel|Dual-specificity RNA methyltransferase RlmN|Elongator protein 3/MiaB/NifB|Radical SAM|Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0003824|GO:0005737|GO:0006364|GO:0008173|GO:0030488|GO:0051536|GO:0070475 G3DSA:3.20.20.70|MF_01849|PF04055|PIRSF006004|SM00729|SSF102114|TIGR00048 BKD09_RS02550 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00080|PR00081|SSF51735 BKD09_RS02555 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|SM00829|SSF50129|SSF51735 BKD09_RS02560 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SSF81901 BKD09_RS02565 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011852 TRAP transporter solute receptor, TAXI family G3DSA:3.40.190.10|PF16868|SSF53850|TIGR02122 BKD09_RS02570 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010652|IPR016983 Protein of unknown function DUF1232|Uncharacterised conserved protein UCP031804 PF06803|PIRSF031804 BKD09_RS02575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 G3DSA:3.30.1360.20|MF_00434|PF01329|SSF55248 BKD09_RS02580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011852 TRAP transporter solute receptor, TAXI family G3DSA:3.40.190.10|PF16868|SSF53850|TIGR02122 BKD09_RS02585 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018946|IPR029052|IPR032093 Alkaline phosphatase D-related|Metallo-dependent phosphatase-like|Phospholipase D, N-terminal G3DSA:3.60.21.10|PF09423|PF16655|SSF56300 BKD09_RS02590 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 BKD09_RS02595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011991|IPR012318 Crp-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF13545|SM00419|SSF46785 BKD09_RS02600 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000640|IPR000795|IPR004161|IPR005225|IPR006298|IPR009000|IPR009022|IPR027417|IPR031157 Elongation factor G, III-V domain|GTP-binding protein TypA|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFG, V domain|Translation elongation factor EFTu-like, domain 2|Translation protein, beta-barrel domain GO:0003924|GO:0005525 G3DSA:2.40.30.10|G3DSA:2.40.50.250|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|PF00009|PF00679|PF03144|PR00315|PS00301|SSF50447|SSF52540|SSF54980|TIGR00231|TIGR01394 BKD09_RS02605 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002937|IPR023753 Amine oxidase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01593|PR00420|SSF51905|SSF54373 BKD09_RS02610 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007263 Protein of unknown function DUF393 PF04134 BKD09_RS02615 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016040|IPR025695 DoxX-like family|NAD(P)-binding domain G3DSA:3.40.50.720|PF13460|PF13781|SSF51735 BKD09_RS02620 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018729 Protein of unknown function DUF2269, transmembrane PF10027 BKD09_RS02625 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR022742|IPR029058 Alpha/Beta hydrolase fold|Serine aminopeptidase, S33 G3DSA:3.40.50.1820|PF12146|SSF53474 BKD09_RS02630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 BKD09_RS02635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 G3DSA:3.90.80.10|MF_00209|PF00719|SSF50324 BKD09_RS02640 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000672|IPR016040|IPR020630|IPR020631|IPR020867 NAD(P)-binding domain|Tetrahydrofolate dehydrogenase/cyclohydrolase|Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain|Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain|Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0004488|GO:0009396|GO:0055114 G3DSA:3.40.192.10|G3DSA:3.40.50.720|MF_01576|PF00763|PF02882|PR00085|PS00766|SSF51735|SSF53223 BKD09_RS02645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003746 Protein of unknown function DUF167 G3DSA:3.30.1200.10|MF_00634|PF02594|SM01152|SSF69786 BKD09_RS02650 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003425 CCB3/YggT GO:0016020 PF02325 BKD09_RS02660 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001753|IPR014748|IPR029045 ClpP/crotonase-like domain|Crontonase, C-terminal|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:1.10.12.10|G3DSA:3.90.226.10|PF00378|SSF52096 BKD09_RS02665 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR017926|IPR029062 Class I glutamine amidotransferase-like|Glutamine amidotransferase G3DSA:3.40.50.880|PF00117|SSF52317 BKD09_RS02670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF00106|PIRSF000126|PR00080|PR00081|SSF51735 BKD09_RS02675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007791|IPR029024 Co-chaperone DjlA, N-terminal|TerB-like G3DSA:1.10.3680.10|PF05099|SSF158682 BKD09_RS02685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|Nucleotide cyclase GO:0009190|GO:0016849|GO:0035556 G3DSA:3.30.70.1230|PF00211|SM00044|SSF55073 BKD09_RS02690 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001128|IPR002401|IPR017972 Cytochrome P450|Cytochrome P450, E-class, group I|Cytochrome P450, conserved site GO:0005506|GO:0016705|GO:0020037|GO:0055114 G3DSA:1.10.630.10|PF00067|PR00385|PR00463|PS00086|SSF48264 BKD09_RS02695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029058 Alpha/Beta hydrolase fold G3DSA:3.40.50.1820|SSF53474 BKD09_RS02700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010290|IPR020846 Major facilitator superfamily domain|Transmembrane secretion effector G3DSA:1.20.1250.20|PF05977|SSF103473 BKD09_RS02705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001893 Cysteine-rich Golgi apparatus protein 1 repeat GO:0016020 PF00839 BKD09_RS02715 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002509|IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF01522|SSF88713 BKD09_RS02725 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|SSF53335 BKD09_RS02745 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010817|IPR011990|IPR016982 HemY, N-terminal|Tetratricopeptide-like helical domain|Uncharacterised conserved protein UCP031802 GO:0005515 G3DSA:1.25.40.10|PF07219|PIRSF031802|SSF48452 BKD09_RS02755 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 G3DSA:3.40.50.10090|PF02602|SSF69618 BKD09_RS02760 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000905|IPR017860|IPR017861|IPR022450 Gcp-like domain|Kae1/TsaD family|Peptidase M22, conserved site|tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 G3DSA:3.30.420.40|MF_01445|PF00814|PR00789|PS01016|SSF53067|TIGR00329|TIGR03723 BKD09_RS02765 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006109|IPR006168|IPR008927|IPR011128|IPR013328|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|Glycerol-3-phosphate dehydrogenase, NAD-dependent|Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal|Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal|NAD(P)-binding domain GO:0004367|GO:0005975|GO:0006072|GO:0009331|GO:0016491|GO:0016616|GO:0046168|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|MF_00394|PF01210|PF07479|PIRSF000114|PR00077|PS00957|SSF48179|SSF51735 BKD09_RS02770 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002740|IPR015947 EVE domain|PUA-like domain G3DSA:3.10.590.10|PF01878|SSF88697 BKD09_RS02775 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|Nucleotide cyclase GO:0009190|GO:0016849|GO:0035556 G3DSA:3.30.70.1230|PF00211|SM00044|SSF55073 BKD09_RS02780 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013538|IPR023393 Activator of Hsp90 ATPase homologue 1-like|START-like domain GO:0006950 G3DSA:3.30.530.20|PF08327|SSF55961 BKD09_RS02785 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011010|IPR013500|IPR014711|IPR027362 DNA breaking-rejoining enzyme, catalytic core|DNA topoisomerase I catalytic fragment, domain 2|DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type|DNA topoisomerase I, catalytic core, eukaryotic-type GO:0003677|GO:0003917|GO:0003918|GO:0006265 G3DSA:1.20.120.380|G3DSA:3.90.15.10|PF01028|SSF55869|SSF56349 BKD09_RS02790 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR011904|IPR020845|IPR025110|IPR032387 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase|Acetate-CoA ligase|Acetyl-coenzyme A synthetase, N-terminal domain GO:0003824|GO:0003987|GO:0008152|GO:0016208|GO:0019427 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|MF_01123|PF00501|PF13193|PF16177|PS00455|SSF56801|TIGR02188 BKD09_RS02795 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005490 L,D-transpeptidase catalytic domain GO:0016740 G3DSA:2.40.440.10|PF03734|SSF141523 BKD09_RS02800 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016071 Staphylococcal nuclease (SNase-like), OB-fold G3DSA:2.40.50.90|PF00565|SM00318|SSF50199 BKD09_RS02805 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012875 Protein of unknown function DUF1674 PF07896 BKD09_RS02810 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001678|IPR006027|IPR023267|IPR029063 NusB/RsmB/TIM44|RNA (C5-cytosine) methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase|SAM-dependent methyltransferase RsmB/NOP2-type GO:0003723|GO:0006355|GO:0008168 G3DSA:1.10.940.10|G3DSA:3.40.50.150|PF01029|PF01189|PR02008|SSF48013|SSF53335 BKD09_RS02815 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012480 Heparinase II/III-like GO:0016829 PF07940 BKD09_RS02820 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002695|IPR011607|IPR016193|IPR024051 AICAR transformylase domain|AICARFT/IMPCHase bienzyme|Cytidine deaminase-like|Methylglyoxal synthase-like domain GO:0003824|GO:0003937|GO:0004643|GO:0006164 G3DSA:3.40.140.20|G3DSA:3.40.50.1380|MF_00139|PF01808|PF02142|PIRSF000414|SM00798|SM00851|SSF52335|SSF53927|TIGR00355 BKD09_RS02825 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR020846|IPR024671 Autophagy-related protein 22-like|Major facilitator superfamily domain G3DSA:1.20.1250.20|PF11700|SSF103473 BKD09_RS02830 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000101|IPR029055 Gamma-glutamyltranspeptidase|Nucleophile aminohydrolases, N-terminal GO:0003840|GO:0006749 PF01019|PR01210|PS00462|SSF56235|TIGR00066 BKD09_RS02835 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005829|IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain|Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PS00216|PS00217|SSF103473 BKD09_RS02840 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004045|IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF02798|SSF47616|SSF52833 BKD09_RS02845 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018715 Protein of unknown function DUF2239 PF09998 BKD09_RS02850 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|PIRSF006603|TIGR00797 BKD09_RS02855 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001853|IPR012336|IPR014440 DSBA-like thioredoxin domain|HCCA isomerase/glutathione S-transferase kappa|Thioredoxin-like fold GO:0015035 G3DSA:3.40.30.10|PF01323|PIRSF006386|SSF52833 BKD09_RS02860 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003710|IPR008927|IPR013328|IPR013332|IPR013752|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|Ketopantoate reductase ApbA/PanE|Ketopantoate reductase, C-terminal domain|Ketopantoate reductase, N-terminal domain|NAD(P)-binding domain GO:0005737|GO:0008677|GO:0015940|GO:0016491|GO:0050661|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF02558|PF08546|SSF48179|SSF51735|TIGR00745 BKD09_RS02865 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009056|IPR024167 Cytochrome c-like domain|Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 G3DSA:1.10.3820.10|G3DSA:1.10.760.10|PF00034|PF13442|PIRSF000005|SSF46626 BKD09_RS02870 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011041|IPR011042|IPR012938 Glucose/Sorbosone dehydrogenase|Six-bladed beta-propeller, TolB-like|Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824|GO:0005975|GO:0016901|GO:0048038 G3DSA:2.120.10.30|PF07995|SSF50952 BKD09_RS02875 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|SSF51735 BKD09_RS02885 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005746|IPR011990|IPR012336|IPR013766|IPR017937 Tetratricopeptide-like helical domain|Thioredoxin|Thioredoxin domain|Thioredoxin, conserved site|Thioredoxin-like fold GO:0005515|GO:0006662|GO:0015035|GO:0045454 G3DSA:1.25.40.10|G3DSA:3.40.30.10|PF00085|PF14559|PF14561|PR00421|PS00194|SSF48452|SSF52833|TIGR01068 BKD09_RS02890 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003111|IPR015947 ATP-dependent protease La (LON), substrate-binding domain|PUA-like domain GO:0004176|GO:0006508 PF02190|SM00464|SSF88697 BKD09_RS02895 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011577|IPR016174 Cytochrome b561, bacterial/Ni-hydrogenase|Di-haem cytochrome, transmembrane GO:0009055|GO:0016020|GO:0016021|GO:0022904 G3DSA:1.20.950.20|PF01292|SSF81342 BKD09_RS02900 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025711 PepSY domain PF13670 BKD09_RS02910 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|SSF46689 BKD09_RS02915 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005651 Uncharacterised protein family UPF0434/Trm112 G3DSA:2.20.25.10|MF_01187|PF03966|SSF158997 BKD09_RS02920 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002938|IPR010971|IPR018168|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain|Ubiquinone biosynthesis hydroxylase UbiH/COQ6|Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0006744|GO:0016491|GO:0016709|GO:0050660|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF01494|PR00420|PS01304|SSF51905|TIGR01988 BKD09_RS02925 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003703|IPR029069 Acyl-CoA thioesterase|HotDog domain GO:0006637|GO:0047617 G3DSA:3.10.129.10|PF13622|SSF54637|TIGR00189 BKD09_RS02930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025640 Domain of unknown function DUF4339 PF14237 BKD09_RS02935 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002187|IPR002332|IPR011322|IPR015867|IPR017918 Nitrogen regulatory PII-like, alpha/beta|Nitrogen regulatory protein P-II, urydylation site|Nitrogen regulatory protein PII|Nitrogen regulatory protein PII, conserved site|Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal GO:0006808|GO:0030234 G3DSA:3.30.70.120|PF00543|PIRSF039144|PR00340|PS00496|PS00638|SM00938|SSF54913 BKD09_RS02940 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001905|IPR002229|IPR024041|IPR029020 Ammonium transporter|Ammonium transporter AmtB-like domain|Ammonium/urea transporter|Blood group Rhesus C/E/D polypeptide GO:0008519|GO:0015696|GO:0016020|GO:0072488 G3DSA:1.10.3430.10|PF00909|PR00342|SSF111352|TIGR00836 BKD09_RS02945 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001845|IPR011991 HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12840|PR00778|SM00418|SSF46785 BKD09_RS02950 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023393 START-like domain G3DSA:3.30.530.20|SSF55961 BKD09_RS02955 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001907|IPR023562|IPR029045 ATP-dependent Clp protease proteolytic subunit|Clp protease proteolytic subunit /Translocation-enhancing protein TepA|ClpP/crotonase-like domain GO:0004252|GO:0006508 G3DSA:3.90.226.10|MF_00444|PF00574|PR00127|SSF52096 BKD09_RS02965 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002187|IPR002332|IPR011322|IPR015867|IPR017918 Nitrogen regulatory PII-like, alpha/beta|Nitrogen regulatory protein P-II, urydylation site|Nitrogen regulatory protein PII|Nitrogen regulatory protein PII, conserved site|Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal GO:0006808|GO:0030234 G3DSA:3.30.70.120|PF00543|PIRSF039144|PR00340|PS00496|PS00638|SM00938|SSF54913 BKD09_RS02970 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001905|IPR018047|IPR024041|IPR029020 Ammonium transporter|Ammonium transporter AmtB-like domain|Ammonium transporter, conserved site|Ammonium/urea transporter GO:0008519|GO:0015696|GO:0016020|GO:0072488 G3DSA:1.10.3430.10|PF00909|PS01219|SSF111352|TIGR00836 BKD09_RS02975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029030 Caspase-like domain G3DSA:3.40.50.1460|PF00656|SSF52129 BKD09_RS02980 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006913|IPR011057 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V|Mss4-like GO:0008152|GO:0016846 G3DSA:3.90.1590.10|PF04828|SSF51316 BKD09_RS02985 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004838|IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferases, class-I, pyridoxal-phosphate-binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PS00105|SSF53383 BKD09_RS02990 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002543|IPR003593|IPR011991|IPR018541|IPR025199|IPR027417 AAA+ ATPase domain|DNA translocase FtsK, 4TM region|FtsK domain|FtsK gamma domain|P-loop containing nucleoside triphosphate hydrolase|Winged helix-turn-helix DNA-binding domain GO:0000166|GO:0003677|GO:0005524 G3DSA:3.40.50.300|PF01580|PF09397|PF13491|SM00382|SM00843|SSF46785|SSF52540 BKD09_RS02995 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004564|IPR029046 Lipoprotein localisation LolA/LolB/LppX|Outer membrane lipoprotein carrier protein LolA-like G3DSA:2.50.20.10|PF03548|SSF89392 BKD09_RS03000 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004808|IPR005135|IPR020847 AP endonuclease 1|AP endonuclease 1, binding site|Endonuclease/exonuclease/phosphatase GO:0003677|GO:0004518|GO:0004519|GO:0005622|GO:0006281 G3DSA:3.60.10.10|PF03372|PS00726|SSF56219|TIGR00195|TIGR00633 BKD09_RS03005 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000595|IPR014710|IPR018490 Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF00027|SM00100|SSF51206 BKD09_RS03010 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF46894|SSF52172 BKD09_RS03015 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005490 L,D-transpeptidase catalytic domain GO:0016740 PF03734 BKD09_RS03020 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 G3DSA:3.90.850.10|SSF56529 BKD09_RS03025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001608|IPR011078|IPR029066 Alanine racemase, N-terminal|PLP-binding barrel|Uncharacterised protein family UPF0001 G3DSA:3.20.20.10|PF01168|PIRSF004848|SSF51419|TIGR00044 BKD09_RS03030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000160|IPR003660|IPR029151|IPR029787|IPR033479 Double Cache domain 1|GGDEF domain|HAMP domain|Nucleotide cyclase|Periplasmic sensor domain-like GO:0004871|GO:0007165|GO:0016021 G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00672|PF00990|PF02743|SM00267|SM00304|SSF103190|SSF158472|SSF55073|TIGR00254 BKD09_RS03035 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000160|IPR029787 GGDEF domain|Nucleotide cyclase G3DSA:3.30.70.270|PF00990|SM00267|SSF55073|TIGR00254 BKD09_RS03040 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001412|IPR002300|IPR002302|IPR009008|IPR009080|IPR013155|IPR014729|IPR015413|IPR025709 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia|Aminoacyl-tRNA synthetase, class Ia, anticodon-binding|Leucine-tRNA ligase|Leucyl-tRNA synthetase, editing domain|Methionyl/Leucyl tRNA synthetase|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold|Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0000166|GO:0002161|GO:0004812|GO:0004823|GO:0005524|GO:0006418|GO:0006429 G3DSA:1.10.730.10|G3DSA:3.40.50.620|G3DSA:3.90.740.10|MF_00049_B|PF00133|PF08264|PF09334|PF13603|PR00985|PS00178|SSF47323|SSF50677|SSF52374|TIGR00396 BKD09_RS03045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 PF04390 BKD09_RS03050 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005790|IPR008921|IPR010372|IPR027417 DNA polymerase III delta, N-terminal|DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|DNA polymerase III, delta subunit|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003887|GO:0006260|GO:0009360 G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF06144|SSF48019|SSF52540|TIGR01128 BKD09_RS03055 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003115|IPR004437 ParB/RepB/Spo0J partition protein family|ParB/Sulfiredoxin GO:0003677 G3DSA:3.90.1530.10|PF02195|SM00470|SSF110849|TIGR00180 BKD09_RS03060 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025669|IPR027417 AAA domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13614|SSF52540 BKD09_RS03065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003682|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 G3DSA:3.40.50.150|MF_00074|PF02527|PIRSF003078|SSF53335|TIGR00138 BKD09_RS03070 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002218|IPR004416|IPR020595|IPR023753|IPR026904 FAD/NAD(P)-binding domain|GidA associated domain 3|MnmG-related, conserved site|tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG|tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0002098|GO:0008033|GO:0016491|GO:0050660|GO:0055114 G3DSA:3.50.50.60|MF_00129|PF01134|PF13932|PR00411|PS01280|PS01281|SM01228|SSF51905|TIGR00136 BKD09_RS03075 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004520|IPR005225|IPR006073|IPR018948|IPR025867|IPR027266|IPR027368|IPR027417 GTP binding domain|GTP-binding protein TrmE, N-terminal|GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1|MnmE, helical domain|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|tRNA modification GTPase MnmE|tRNA modification GTPase MnmE domain 2 GO:0003924|GO:0005515|GO:0005525|GO:0005622|GO:0006400 G3DSA:1.20.120.430|G3DSA:3.30.1360.120|G3DSA:3.40.50.300|MF_00379|PF01926|PF10396|PF12631|SSF116878|SSF52540|TIGR00231|TIGR00450 BKD09_RS03080 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000194|IPR003593|IPR004665|IPR011112|IPR011113|IPR011129|IPR012340|IPR027417 AAA+ ATPase domain|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|Cold shock protein|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Rho termination factor, N-terminal|Rho termination factor, RNA-binding|Transcription termination factor Rho GO:0003676|GO:0003723|GO:0005524|GO:0006353|GO:0008186 G3DSA:1.10.720.10|G3DSA:2.40.50.140|G3DSA:3.40.50.300|MF_01884|PF00006|PF07497|PF07498|SM00357|SM00382|SM00959|SSF50249|SSF52540|SSF68912|TIGR00767 BKD09_RS03085 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005265|IPR014351 Conserved hypothetical protein CHP00701|Uncharacterised protein family UPF0093 PF03653|PIRSF004638|TIGR00701 BKD09_RS03095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005177|IPR026565 Bifunctional kinase-pyrophosphorylase|Putative pyruvate, phosphate dikinase regulatory protein GO:0005524|GO:0016772 MF_00921|PF03618 BKD09_RS03100 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003697|IPR029001 Inosine triphosphate pyrophosphatase-like|Maf-like protein GO:0005737 G3DSA:3.90.950.10|MF_00528|PF02545|PIRSF006305|SSF52972 BKD09_RS03105 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001977|IPR027417 Dephospho-CoA kinase|P-loop containing nucleoside triphosphate hydrolase GO:0004140|GO:0005524|GO:0015937 G3DSA:3.40.50.300|MF_00376|PF01121|SSF52540|TIGR00152 BKD09_RS03110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006054|IPR006309|IPR012337|IPR013520 DNA polymerase 3, epsilon subunit|DNA polymerase III, epsilon subunit|Exonuclease, RNase T/DNA polymerase III|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0003887|GO:0006260 G3DSA:3.30.420.10|PF00929|SM00479|SSF53098|TIGR00573|TIGR01406 BKD09_RS03115 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 G3DSA:3.10.420.10|MF_00821|PF02556|PR01594|SSF54611|TIGR00809 BKD09_RS03120 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007379|IPR016985|IPR032710 NTF2-like domain|Tim44-like domain|Uncharacterised conserved protein UCP031890, Tim44-related PD111165|PF04280|PIRSF031890|SM00978|SSF54427 BKD09_RS03125 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005300|IPR009009|IPR010611 3D domain|Lytic transglycosylase MltA|RlpA-like protein, double-psi beta-barrel domain GO:0004553|GO:0009254|GO:0019867 G3DSA:2.40.40.10|PF03562|PF06725|SM00925|SSF50685 BKD09_RS03130 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002625 Smr domain PF01713|SM00463|SSF160443 BKD09_RS03140 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003593|IPR003959|IPR004491|IPR019489|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|Clp ATPase, C-terminal|Heat shock protein HslU|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 G3DSA:1.10.8.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00249|PF00004|PF07724|PF10431|SM00382|SM01086|SSF52540|TIGR00390 BKD09_RS03145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019691 Protein of unknown function DUF2585 GO:0005886 MF_01514|PF10755 BKD09_RS03150 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016181|IPR019432 Acyl-CoA N-acyltransferase|Siderophore biosynthesis protein, conserved domain G3DSA:3.40.630.30|PF13523|SM01006|SSF55729 BKD09_RS03155 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001353|IPR022281|IPR029055 ATP-dependent protease, HslV subunit|Nucleophile aminohydrolases, N-terminal|Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0006508|GO:0009376|GO:0051603 G3DSA:3.60.20.10|MF_00248|PF00227|PIRSF039093|SSF56235|TIGR03692 BKD09_RS03160 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000807|IPR020565|IPR020568 Imidazoleglycerol-phosphate dehydratase|Imidazoleglycerol-phosphate dehydratase, conserved site|Ribosomal protein S5 domain 2-type fold GO:0000105|GO:0004424 G3DSA:3.30.230.40|MF_00076|PF00475|PS00954|PS00955|SSF54211 BKD09_RS03165 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR024399 Protein of unknown function DUF2628 PF10947 BKD09_RS03170 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010139|IPR017926|IPR029062 Class I glutamine amidotransferase-like|Glutamine amidotransferase|Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 G3DSA:3.40.50.880|MF_00278|PF00117|PIRSF000495|SSF52317|TIGR01855 BKD09_RS03175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006062|IPR006063|IPR011060|IPR013785|IPR023016 Aldolase-type TIM barrel|Histidine biosynthesis|Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase|Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA|Ribulose-phosphate binding barrel GO:0000105|GO:0003824|GO:0003949|GO:0008152 G3DSA:3.20.20.70|MF_01014|PF00977|SSF51366|TIGR00007 BKD09_RS03180 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004651|IPR006062|IPR011060|IPR013785 Aldolase-type TIM barrel|Histidine biosynthesis|Histidine biosynthesis, HisF|Ribulose-phosphate binding barrel GO:0000105|GO:0000107|GO:0003824|GO:0005737|GO:0008152 G3DSA:3.20.20.70|MF_01013|PF00977|SSF51366|TIGR00735 BKD09_RS03185 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008179|IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase|Phosphoribosyl-ATP pyrophosphohydrolase-like GO:0000105|GO:0004636 MF_01020|PF01503|SSF101386|TIGR03188 BKD09_RS03190 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004566|IPR006083|IPR027417 Bacterial pantothenate kinase|P-loop containing nucleoside triphosphate hydrolase|Phosphoribulokinase/uridine kinase GO:0004594|GO:0005524|GO:0005737|GO:0008152|GO:0015937|GO:0016301 G3DSA:3.40.50.300|MF_00215|PF00485|PIRSF000545|SSF52540|TIGR00554 BKD09_RS03195 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR001789|IPR003594|IPR003661|IPR004358|IPR011006|IPR013767 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0006355|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF00989|PF02518|PR00344|SM00091|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55785|SSF55874|TIGR00229 BKD09_RS03205 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000523|IPR003593|IPR004482|IPR014721|IPR020568|IPR025158|IPR027417 AAA+ ATPase domain|Magnesium chelatase ChlI domain|Mg chelatase-related protein|Mg chelatase-related protein, C-terminal domain|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup G3DSA:3.30.230.10|G3DSA:3.40.50.300|PF01078|PF13335|PF13541|SM00382|SSF52540|SSF54211|TIGR00368 BKD09_RS03210 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009875 PilZ domain GO:0035438 PF07238|SSF141371 BKD09_RS03215 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011990|IPR014596|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain|Uncharacterised conserved protein UCP035836 GO:0005515 G3DSA:1.25.40.10|PF13432|PF14559|PIRSF035836|SM00028|SSF48452 BKD09_RS03220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002586|IPR027417 CobQ/CobB/MinD/ParA nucleotide binding domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF01656|SSF52540 BKD09_RS03225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013361|IPR019027 Pilus biogenesis CpaD|Pilus biogenesis CpaD-related PF09476|TIGR02522 BKD09_RS03230 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001775|IPR004846|IPR007055|IPR032789 BON domain|GspD/PilQ family|Pilus formation protein, N-terminal|Type II/III secretion system GO:0009306 PF00263|PF04972|PF13629|PR00811 BKD09_RS03235 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013974|IPR017592|IPR031571 Flp pilus assembly protein RcpC/CpaB domain|Pilus assembly, Flp-type CpaB|SAF domain PF08666|PF16976|SM00858|TIGR03177 BKD09_RS03240 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004215|IPR004218|IPR006284|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Glutathione synthetase, prokaryotic|Pre-ATP-grasp domain|Prokaryotic glutathione synthetase, ATP-binding|Prokaryotic glutathione synthetase, N-terminal GO:0003824|GO:0004363|GO:0005524|GO:0005829|GO:0006750 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|MF_00162|PF02951|PF02955|SSF52440|SSF56059|TIGR01380 BKD09_RS03245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003509|IPR011335|IPR011856 Restriction endonuclease type II-like|Uncharacterised protein family UPF0102|tRNA endonuclease-like domain GO:0003676|GO:0004518 G3DSA:3.40.1350.10|MF_00048|PF02021|SSF52980|TIGR00252 BKD09_RS03250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000878|IPR008189|IPR014776|IPR014777|IPR018063 SAM-dependent methyltransferase RsmI, conserved site|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2|rRNA small subunit methyltransferase I GO:0008152|GO:0008168 G3DSA:3.30.950.10|G3DSA:3.40.1010.10|MF_01877|PF00590|PIRSF005917|PS01296|SSF53790|TIGR00096 BKD09_RS03255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS03260 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004559|IPR006638|IPR007197|IPR010723|IPR023404 Coproporphyrinogen III oxidase, oxygen-independent related|Elongator protein 3/MiaB/NifB|HemN, C-terminal|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0004109|GO:0005737|GO:0006779|GO:0051536|GO:0055114 G3DSA:3.80.30.20|PF04055|PF06969|SM00729|SSF102114|TIGR00539 BKD09_RS03265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002637|IPR020922|IPR029001 Ham1-like protein|Inosine triphosphate pyrophosphatase-like|Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0016787|GO:0017111 G3DSA:3.90.950.10|MF_01405|PF01725|SSF52972|TIGR00042 BKD09_RS03270 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001247|IPR002381|IPR015847|IPR018336|IPR020568|IPR027408 Exoribonuclease, phosphorolytic domain 1|Exoribonuclease, phosphorolytic domain 2|PNPase/RNase PH domain|Ribonuclease PH, conserved site|Ribonuclease phosphorolytic, bacterial-type|Ribosomal protein S5 domain 2-type fold GO:0000049|GO:0004549|GO:0008033 G3DSA:3.30.230.70|MF_00564|PF01138|PF03725|PS01277|SSF54211|SSF55666|TIGR01966 BKD09_RS03275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002571|IPR011991|IPR021153|IPR029016 GAF domain-like|Heat-inducible transcription repressor HrcA|Heat-inducible transcription repressor HrcA, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|MF_00081|PF01628|PIRSF005485|SSF46785|SSF55781|TIGR00331 BKD09_RS03280 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000740|IPR009012|IPR013805 GrpE nucleotide exchange factor|GrpE nucleotide exchange factor, coiled-coil|GrpE nucleotide exchange factor, head GO:0000774|GO:0006457|GO:0042803|GO:0051087 G3DSA:2.30.22.10|G3DSA:3.90.20.20|MF_01151|PF01025|PR00773|PS01071|SSF51064|SSF58014 BKD09_RS03285 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|PF00857|SSF52499 BKD09_RS03295 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012725|IPR013126|IPR018181|IPR029047|IPR029048 Chaperone DnaK|Heat shock protein 70 family|Heat shock protein 70, conserved site|Heat shock protein 70kD, C-terminal domain|Heat shock protein 70kD, peptide-binding domain GO:0005524|GO:0006457|GO:0051082 G3DSA:1.20.1270.10|G3DSA:2.60.34.10|G3DSA:3.30.30.30|G3DSA:3.30.420.40|G3DSA:3.90.640.10|MF_00332|PF00012|PR00301|PS00297|PS00329|PS01036|SSF100920|SSF100934|SSF53067|TIGR02350 BKD09_RS03300 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001305|IPR001623|IPR002939|IPR008971|IPR012724|IPR018253 Chaperone DnaJ|Chaperone DnaJ, C-terminal|DnaJ domain|DnaJ domain, conserved site|HSP40/DnaJ peptide-binding|Heat shock protein DnaJ, cysteine-rich domain GO:0005524|GO:0006457|GO:0009408|GO:0031072|GO:0051082 G3DSA:1.10.287.110|G3DSA:2.10.230.10|G3DSA:2.60.260.20|MF_01152|PF00226|PF00684|PF01556|PR00625|PS00636|SM00271|SSF46565|SSF49493|SSF57938|TIGR02349 BKD09_RS03305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001737|IPR020598|IPR029063 Ribosomal RNA adenine methylase transferase, N-terminal|Ribosomal RNA adenine methyltransferase KsgA/Erm|S-adenosyl-L-methionine-dependent methyltransferase GO:0000154|GO:0000179|GO:0008649 G3DSA:3.40.50.150|PF00398|SM00650|SSF53335 BKD09_RS03310 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005025|IPR029039 Flavoprotein-like domain|NADPH-dependent FMN reductase-like GO:0016491 G3DSA:3.40.50.360|PF03358|SSF52218 BKD09_RS03315 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001754|IPR011060|IPR013785|IPR014732|IPR018089 Aldolase-type TIM barrel|Orotidine 5'-phosphate decarboxylase|Orotidine 5'-phosphate decarboxylase domain|Orotidine 5'-phosphate decarboxylase, active site|Ribulose-phosphate binding barrel GO:0003824|GO:0004590|GO:0006207|GO:0008152|GO:0044205 G3DSA:3.20.20.70|MF_01200_B|PF00215|PS00156|SM00934|SSF51366|TIGR01740 BKD09_RS03320 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010753|IPR011008 Dimeric alpha-beta barrel|Domain of unknown function DUF1330 G3DSA:3.30.70.900|PF07045|SSF54909 BKD09_RS03325 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001343|IPR011049|IPR018511 Haemolysin-type calcium-binding repeat|Hemolysin-type calcium-binding conserved site|Serralysin-like metalloprotease, C-terminal GO:0005509 G3DSA:2.150.10.10|PF00353|PR00313|PS00330|SSF51120 BKD09_RS03330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR010128|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|ATPase, type I secretion system, PrtD|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0008565|GO:0016021|GO:0016887|GO:0030253|GO:0030256|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540|SSF90123|TIGR01842 BKD09_RS03335 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003997|IPR010129 RTX secretion protein D, Gram-negative bacteria|Type I secretion membrane fusion protein, HlyD family GO:0009306|GO:0015031|GO:0016020|GO:0016021 G3DSA:2.40.50.100|PF13437|PF13533|PR01490|TIGR01843 BKD09_RS03340 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|SSF46894 BKD09_RS03345 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011055|IPR016047 Duplicated hybrid motif|Peptidase M23 G3DSA:2.70.70.10|PF01551|SSF51261 BKD09_RS03350 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000846|IPR016040|IPR022663|IPR022664|IPR023940 Dihydrodipicolinate reductase|Dihydrodipicolinate reductase, C-terminal|Dihydrodipicolinate reductase, N-terminal|Dihydrodipicolinate reductase, conserved site|NAD(P)-binding domain GO:0008839|GO:0009089|GO:0055114 G3DSA:3.40.50.720|MF_00102|PF01113|PF05173|PIRSF000161|PS01298|SSF51735|SSF55347|TIGR00036 BKD09_RS03355 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001345|IPR005952|IPR013078|IPR029033 Histidine phosphatase superfamily|Histidine phosphatase superfamily, clade-1|Phosphoglycerate mutase 1|Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0004619|GO:0006096|GO:0008152|GO:0016868 G3DSA:3.40.50.1240|MF_01039|PF00300|PS00175|SM00855|SSF53254|TIGR01258 BKD09_RS03360 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008332|IPR009057|IPR011991|IPR014048|IPR018060 DNA binding HTH domain, AraC-type|Homeodomain-like|Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding|Methylguanine DNA methyltransferase, ribonuclease-like domain|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0003824|GO:0003908|GO:0006281|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:1.10.10.60|G3DSA:3.30.160.70|PF01035|PF12833|SM00342|SSF46689|SSF46767|SSF53155|TIGR00589 BKD09_RS03365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016990|IPR019253 Protein of unknown function DUF2244, transmembrane|Uncharacterised conserved protein UCP032162, transmembrane PF10003|PIRSF032162 BKD09_RS03370 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000445|IPR003265|IPR003651|IPR004035|IPR005759|IPR011257|IPR023170 DNA glycosylase|Endonuclease III|Endonuclease III, iron-sulphur binding site|Endonuclease III-like, iron-sulphur cluster loop motif|Helix-hairpin-helix motif|Helix-turn-helix, base-excision DNA repair, C-terminal|HhH-GPD domain GO:0003677|GO:0003824|GO:0003906|GO:0006281|GO:0006284|GO:0051539 G3DSA:1.10.1670.10|G3DSA:1.10.340.30|MF_00942|PF00633|PF00730|PF10576|PS00764|SM00478|SM00525|SSF48150|TIGR01083 BKD09_RS03375 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF00529|PF16576|SSF111369 BKD09_RS03380 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS03385 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic PF07264 BKD09_RS03390 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000209|IPR008979|IPR015500|IPR022398|IPR023828 Galactose-binding domain-like|Peptidase S8, subtilisin, His-active site|Peptidase S8, subtilisin, Ser-active site|Peptidase S8, subtilisin-related|Peptidase S8/S53 domain GO:0004252|GO:0006508 G3DSA:2.60.120.380|G3DSA:3.40.50.200|PF00082|PR00723|PS00137|PS00138|SSF49785|SSF52743 BKD09_RS03395 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 G3DSA:3.40.50.1580|PF01048|SSF53167 BKD09_RS03400 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000209|IPR009020|IPR015366 Peptidase S53, activation domain|Peptidase S8/S53 domain|Proteinase propeptide inhibitor GO:0004252|GO:0006508|GO:0008236 G3DSA:3.40.50.200|PF00082|PF09286|SM00944|SSF52743|SSF54897 BKD09_RS03405 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002145|IPR010985|IPR013321|IPR014160|IPR014864|IPR022988 Arc-type ribbon-helix-helix|Nickel-responsive transcriptional regulator NikR|Nickel-responsive transcriptional regulator NikR, proteobacteria|Ribbon-helix-helix|Ribbon-helix-helix protein, CopG|Transcription factor, NikR, nickel binding C-terminal GO:0003677|GO:0006355|GO:0010045|GO:0016151 G3DSA:1.10.1220.10|G3DSA:3.30.70.1150|MF_00476|PF01402|PF08753|SSF47598|SSF55021|TIGR02793 BKD09_RS03410 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001757|IPR007029|IPR008250|IPR009078|IPR011017|IPR018303|IPR023214|IPR023299|IPR027256 Ferritin-like superfamily|HAD-like domain|P-type ATPase|P-type ATPase, A domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site|P-type ATPase, subfamily IB|TRASH domain|YHS domain GO:0000166|GO:0006812|GO:0016021|GO:0019829|GO:0046872 G3DSA:2.70.150.10|G3DSA:3.40.1110.10|G3DSA:3.40.50.1000|PF00122|PF00702|PF04945|PR00119|PR00943|PS00154|SM00746|SSF47240|SSF56784|SSF81653|SSF81665|TIGR01494|TIGR01511|TIGR01512|TIGR01525 BKD09_RS03415 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 PF02583 BKD09_RS03420 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family G3DSA:2.30.30.330|PF05708|SSF54001 BKD09_RS03425 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002937|IPR023753 Amine oxidase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01593|SSF51905|SSF54373 BKD09_RS03430 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925 BKD09_RS03435 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002547|IPR004532|IPR005121|IPR005146|IPR005147|IPR009061|IPR012340|IPR020825 B3/B4 tRNA-binding domain|Nucleic acid-binding, OB-fold|Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding|Phenylalanine-tRNA ligase, class IIc, beta subunit|Phenylalanyl-tRNA synthetase, B3/B4|Putative DNA-binding domain|tRNA synthetase, B5-domain|tRNA-binding domain GO:0000049|GO:0000287|GO:0003723|GO:0004826|GO:0005524|GO:0005737|GO:0006432|GO:0008033 G3DSA:2.40.50.140|G3DSA:3.30.56.10|G3DSA:3.30.56.20|G3DSA:3.30.70.380|G3DSA:3.30.930.10|G3DSA:3.50.40.10|MF_00283|PF01588|PF03147|PF03483|PF03484|SM00873|SM00874|SM00896|SSF46955|SSF50249|SSF54991|SSF55681|SSF56037|TIGR00472 BKD09_RS03440 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002319|IPR004188|IPR004529|IPR010978|IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial|Phenylalanine-tRNA ligase, class II, N-terminal|Phenylalanyl-tRNA synthetase|Phenylalanyl-tRNA synthetase, class IIc, alpha subunit|tRNA-binding arm GO:0000049|GO:0000166|GO:0004812|GO:0004826|GO:0005524|GO:0005737|GO:0006432|GO:0043039 G3DSA:3.30.930.10|MF_00281|PF01409|PF02912|SSF46589|SSF55681|TIGR00468 BKD09_RS03450 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 G3DSA:1.10.1900.20|MF_00382|PD002389|PF00453|PR00062|PS00937|SSF74731|TIGR01032 BKD09_RS03455 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001706|IPR018265|IPR021137 Ribosomal protein L35|Ribosomal protein L35, conserved site|Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00514|PF01632|PR00064|PS00936|SSF143034|TIGR00001 BKD09_RS03465 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001288|IPR019814|IPR019815 Translation initiation factor 3|Translation initiation factor 3, C-terminal|Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 G3DSA:3.10.20.80|G3DSA:3.30.110.10|MF_00080|PF00707|PF05198|SSF54364|SSF55200|TIGR00168 BKD09_RS03470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR022742|IPR029058 Alpha/Beta hydrolase fold|Serine aminopeptidase, S33 G3DSA:3.40.50.1820|PF12146|SSF53474 BKD09_RS03475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002559|IPR008490 Transposase InsH, N-terminal|Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PF01609|PF05598 BKD09_RS03480 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009959|IPR032710 NTF2-like domain|Polyketide cyclase SnoaL-like domain G3DSA:3.10.450.50|PF12680|SSF54427 BKD09_RS03485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029069 HotDog domain G3DSA:3.10.129.10|PF13622|SSF54637 BKD09_RS03490 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004453|IPR009051|IPR011989|IPR013542|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|Alpha-helical ferredoxin|Armadillo-like helical|Domain of unknown function DUF1730|Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491|GO:0051536 G3DSA:1.25.10.10|G3DSA:3.30.70.20|MF_00916|PF08331|PF13484|PS00198|SSF46548|TIGR00276 BKD09_RS03495 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004045|IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF13417|SSF47616|SSF52833 BKD09_RS03500 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 MF_01006|PF02673|TIGR00753 BKD09_RS03505 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006094|IPR007173|IPR016166|IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|D-arabinono-1,4-lactone oxidase|FAD linked oxidase, N-terminal|FAD-binding, type 2 GO:0003824|GO:0003885|GO:0016020|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.30.465.10|PF01565|PF04030|SSF56176 BKD09_RS03510 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF00106|PR00081|SSF51735 BKD09_RS03515 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016040|IPR029903 NAD(P)-binding domain|RmlD-like substrate binding domain G3DSA:3.40.50.720|PF04321|SSF51735 BKD09_RS03525 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005625 PepSY-associated TM protein PF03929 BKD09_RS03530 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000531|IPR010105|IPR010917|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, conserved site|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PS01156|SSF56935|TIGR01783 BKD09_RS03535 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006656|IPR006657|IPR006963|IPR009010|IPR019546|IPR027467 Aspartate decarboxylase-like domain|Molybdopterin dinucleotide-binding domain|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, 4Fe-4S domain|Molybdopterin oxidoreductase, molybdopterin cofactor binding site|Twin-arginine translocation pathway, signal sequence, bacterial/archaeal GO:0016491|GO:0030151|GO:0051539|GO:0055114 G3DSA:2.20.25.90|G3DSA:2.40.40.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|PF00384|PF01568|PF04879|PS00551|SM00926|SSF50692|SSF53706|TIGR01409 BKD09_RS03540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain G3DSA:3.30.70.20|PF13247|PS00198|SSF54862 BKD09_RS03545 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006471|IPR011577|IPR016174 Cytochrome b561, bacterial/Ni-hydrogenase|Di-haem cytochrome, transmembrane|Formate dehydrogenase, gamma subunit GO:0008863|GO:0009055|GO:0009326|GO:0016020|GO:0016021|GO:0022904|GO:0045333 G3DSA:1.20.950.20|PF01292|SSF81342|TIGR01583 BKD09_RS03550 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain G3DSA:1.10.1060.10|G3DSA:3.30.70.20|PF12838|PF13187|PS00198|SSF54862 BKD09_RS03555 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021736 Protein of unknown function DUF3305 PF11749 BKD09_RS03560 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021735 Protein of unknown function DUF3306 PF11748 BKD09_RS03565 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR020945 DMSO/Nitrate reductase chaperone G3DSA:1.10.3480.10|PF02613|SSF89155 BKD09_RS03575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003018|IPR003594|IPR003661|IPR004358|IPR029016 GAF domain|GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0005515|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.40|G3DSA:3.30.565.10|PF01590|PF02518|PR00344|SM00065|SM00387|SM00388|SSF47384|SSF55781|SSF55874 BKD09_RS03580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 BKD09_RS03585 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS03590 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000537|IPR023214 HAD-like domain|UbiA prenyltransferase family GO:0004659|GO:0016021 G3DSA:3.40.50.1000|PF01040 BKD09_RS03595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002562|IPR012337 3'-5' exonuclease domain|Ribonuclease H-like domain GO:0003676|GO:0006139|GO:0008408 G3DSA:3.30.420.10|PF01612|SM00474|SSF53098 BKD09_RS03600 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010664 Lipopolysaccharide assembly, LptC-related PF06835 BKD09_RS03605 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005653 Organic solvent tolerance-like, N-terminal G3DSA:2.60.450.10|PF03968 BKD09_RS03610 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030921|IPR032823 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|LPS export ABC transporter, ATP-binding protein LptB|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887|GO:0043190|GO:0055085 G3DSA:3.40.50.300|PF00005|PF12399|PS00211|SM00382|SSF52540|TIGR04406 BKD09_RS03615 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000394|IPR007046|IPR007634 RNA polymerase sigma factor 54|RNA polymerase sigma factor 54, DNA-binding|RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PF00309|PF04552|PF04963|PIRSF000774|PR00045|PS00717|PS00718|TIGR02395 BKD09_RS03620 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003489|IPR032528 Ribosomal protein S30Ae/sigma 54 modulation protein|Sigma 54 modulation/S30EA ribosomal protein, C-terminal GO:0044238 G3DSA:3.30.160.100|PF02482|PF16321|SSF69754|TIGR00741 BKD09_RS03625 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002178|IPR006320|IPR016152 PTS EIIA type-2 domain|Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN|Phosphotransferase/anion transporter GO:0005215|GO:0006810|GO:0008982|GO:0009401 G3DSA:3.40.930.10|PF00359|PS00372|SSF55804|TIGR01419 BKD09_RS03630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005546 Autotransporter beta-domain G3DSA:2.40.128.130|PF03797|SM00869|SSF103515 BKD09_RS03635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001440|IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide repeat 1|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF00515|PF13432|SM00028|SSF48452 BKD09_RS03640 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|SSF46689|SSF48498 BKD09_RS03645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SSF51735 BKD09_RS03650 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005097|IPR016040 NAD(P)-binding domain|Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 G3DSA:3.40.50.720|PF03435|SSF51735 BKD09_RS03655 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801 BKD09_RS03660 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002035|IPR010607 Protein of unknown function DUF1194|von Willebrand factor, type A G3DSA:3.40.50.410|PF06707|SSF53300 BKD09_RS03665 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13432|SSF48452 BKD09_RS03670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009531 Protein of unknown function DUF1150 PF06620 BKD09_RS03675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002068|IPR008978 Alpha crystallin/Hsp20 domain|HSP20-like chaperone G3DSA:2.60.40.790|PF00011|SSF49764 BKD09_RS03680 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR008995|IPR012340|IPR013611|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0016887|GO:0043190 G3DSA:2.40.50.140|G3DSA:3.40.50.300|PF00005|PF08402|PS00211|SM00382|SSF50331|SSF52540 BKD09_RS03685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS03690 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS03695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.40.190.10|PF13416|SSF53850 BKD09_RS03700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|SSF89796 BKD09_RS03705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003718|IPR015946|IPR019953 K homology domain-like, alpha/beta|Organic hydroperoxide resistance protein famiy|OsmC/Ohr family GO:0006979 G3DSA:2.20.25.10|G3DSA:3.30.300.20|PF02566|SSF82784|TIGR03561 BKD09_RS03710 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|SM00347|SSF46785 BKD09_RS03715 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000305 GIY-YIG nuclease superfamily PF01541|SSF82771 BKD09_RS03725 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012644 Conserved hypothetical protein CHP02300, FYDLN acid PF09538|TIGR02300 BKD09_RS03730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001986|IPR006264|IPR013792|IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase|3-phosphoshikimate 1-carboxyvinyltransferase, conserved site|Enolpyruvate transferase domain|RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824|GO:0003866|GO:0016765 G3DSA:3.65.10.10|MF_00210|PF00275|PIRSF000505|PS00104|PS00885|SSF55205|TIGR01356 BKD09_RS03735 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003136|IPR011994|IPR018977|IPR027417 Cytidylate kinase|Cytidylate kinase domain|NurA domain|P-loop containing nucleoside triphosphate hydrolase GO:0004127|GO:0005524|GO:0006139 G3DSA:3.40.50.300|MF_00238|PF02224|PF09376|SSF52540|TIGR00017 BKD09_RS03740 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000110|IPR003029|IPR012340|IPR022967 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|Ribosomal protein S1|S1 domain GO:0003676|GO:0003723|GO:0003735|GO:0005840|GO:0006412 G3DSA:2.40.50.140|PF00575|PIRSF002111|PR00681|SM00316|SSF50249|TIGR00717 BKD09_RS03745 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002142|IPR004635|IPR029045 ClpP/crotonase-like domain|Peptidase S49|Peptidase S49, SppA GO:0006508|GO:0008233 G3DSA:3.90.226.10|PF01343|SSF52096|TIGR00706 BKD09_RS03750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000119|IPR005685|IPR010992|IPR020816 Histone-like DNA-binding protein|Histone-like DNA-binding protein, conserved site|Integration host factor (IHF)-like DNA-binding domain|Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 G3DSA:4.10.520.10|MF_00381|PF00216|PR01727|PS00045|SM00411|SSF47729|TIGR00988 BKD09_RS03755 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 PF06305 BKD09_RS03760 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001240|IPR011060|IPR013785 Aldolase-type TIM barrel|N-(5'phosphoribosyl) anthranilate isomerase (PRAI)|Ribulose-phosphate binding barrel GO:0003824|GO:0004640|GO:0006568|GO:0008152 G3DSA:3.20.20.70|MF_00135|PF00697|SSF51366 BKD09_RS03765 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001926|IPR006653|IPR006654|IPR023026 Tryptophan synthase beta chain/beta chain-like|Tryptophan synthase beta subunit-like PLP-dependent enzyme|Tryptophan synthase, beta chain|Tryptophan synthase, beta chain, conserved site GO:0000162|GO:0004834|GO:0006568 G3DSA:3.40.50.1100|MF_00133|PF00291|PIRSF001413|PS00168|SSF53686|TIGR00263 BKD09_RS03770 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002028|IPR011060|IPR013785|IPR018204 Aldolase-type TIM barrel|Ribulose-phosphate binding barrel|Tryptophan synthase, alpha chain|Tryptophan synthase, alpha chain, active site GO:0003824|GO:0004834|GO:0006568|GO:0008152 G3DSA:3.20.20.70|MF_00131|PF00290|PS00167|SSF51366|TIGR00262 BKD09_RS03775 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000022|IPR000438|IPR029045 Acetyl-CoA carboxylase carboxyl transferase, beta subunit|Carboxyl transferase|ClpP/crotonase-like domain GO:0003989|GO:0006633|GO:0009317 G3DSA:3.90.226.10|MF_01395|PF01039|PR01070|SSF52096|TIGR00515 BKD09_RS03780 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001645|IPR004101|IPR013221|IPR018109 Folylpolyglutamate synthetase|Folylpolyglutamate synthetase, conserved site|Mur ligase, C-terminal|Mur ligase, central GO:0004326|GO:0005524|GO:0009058|GO:0009396|GO:0016874 G3DSA:3.40.1190.10|G3DSA:3.90.190.20|PF08245|PIRSF001563|PS01012|SSF53244|SSF53623|TIGR01499 BKD09_RS03785 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011152|IPR024654|IPR029052 Calcineurin-like phosphoesterase domain, lpxH type|Metallo-dependent phosphatase-like|Phosphoesterase MJ0912 G3DSA:3.60.21.10|PF12850|PIRSF000883|SSF56300 BKD09_RS03790 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019587|IPR023393 Polyketide cyclase/dehydrase|START-like domain G3DSA:3.30.530.20|PF10604|SSF55961 BKD09_RS03795 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005746|IPR012336|IPR013766|IPR017937 Thioredoxin|Thioredoxin domain|Thioredoxin, conserved site|Thioredoxin-like fold GO:0006662|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00085|PIRSF000077|PR00421|PS00194|SSF52833|TIGR01068 BKD09_RS03800 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011335|IPR014016|IPR014017|IPR014151|IPR027417 DNA helicase, AddA type|P-loop containing nucleoside triphosphate hydrolase|Restriction endonuclease type II-like|UvrD-like DNA helicase, C-terminal|UvrD-like Helicase, ATP-binding domain GO:0005524|GO:0016787 G3DSA:1.10.486.10|G3DSA:3.40.50.300|PF00580|PF12705|PF13361|SSF52540|SSF52980|TIGR02784 BKD09_RS03805 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014153|IPR027417 Double-strand break repair protein AddB|P-loop containing nucleoside triphosphate hydrolase PF12705|SSF52540|TIGR02786 BKD09_RS03810 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025877|IPR029044 MobA-like NTP transferase|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF12804|SSF53448 BKD09_RS03815 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009875 PilZ domain GO:0035438 PF07238|SSF141371 BKD09_RS03820 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002575|IPR003442|IPR011009|IPR012180|IPR027417 Aminoglycoside phosphotransferase|P-loop containing nucleoside triphosphate hydrolase|Predicted bifunctional ATPase/phosphotransferase|Protein kinase-like domain|tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 G3DSA:3.30.200.20|G3DSA:3.40.50.300|G3DSA:3.90.1200.10|PF01636|PF02367|PIRSF036599|SSF52540|SSF56112|TIGR00150 BKD09_RS03825 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|PAS domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF02518|PF12860|PR00344|SM00091|SM00387|SM00388|SSF47384|SSF55785|SSF55874 BKD09_RS03830 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008180|IPR008181|IPR029054 Deoxyuridine triphosphate nucleotidohydrolase|Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase|dUTPase-like GO:0004170|GO:0016787|GO:0046080 G3DSA:2.70.40.10|MF_00116|PF00692|SSF51283|TIGR00576 BKD09_RS03835 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003382|IPR005252|IPR007085|IPR010985 Coenzyme A biosynthesis bifunctional protein CoaBC|DNA/pantothenate metabolism flavoprotein, C-terminal|Flavoprotein|Ribbon-helix-helix GO:0003824|GO:0004632|GO:0004633|GO:0006355|GO:0010181|GO:0015937|GO:0015941 G3DSA:3.40.50.10300|G3DSA:3.40.50.1950|PF02441|PF04127|SSF102645|SSF47598|SSF52507|TIGR00521 BKD09_RS03840 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004147|IPR010232|IPR011009 Probable protein kinase UbiB|Protein kinase-like domain|UbiB domain GO:0006744 G3DSA:3.90.1200.10|PF03109|SSF56112|TIGR01982 BKD09_RS03845 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004033|IPR023576|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|UbiE/COQ5 methyltransferase|UbiE/COQ5 methyltransferase, conserved site GO:0008168 G3DSA:3.40.50.150|MF_01813|PF01209|PS01183|PS01184|SSF53335|TIGR01934 BKD09_RS03850 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010663|IPR010979|IPR012319|IPR015886|IPR015887|IPR020629 DNA glycosylase/AP lyase, H2TH DNA-binding|DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site|Formamidopyrimidine-DNA glycosylase|Formamidopyrimidine-DNA glycosylase, catalytic domain|Ribosomal protein S13-like, H2TH|Zinc finger, FPG/IleRS-type GO:0003676|GO:0003677|GO:0003684|GO:0003906|GO:0006281|GO:0006284|GO:0006289|GO:0008270|GO:0008534|GO:0016799 G3DSA:1.10.8.50|G3DSA:3.20.190.10|MF_00103|PF01149|PF06827|PF06831|PS01242|SM00898|SM01232|SSF46946|SSF57716|SSF81624|TIGR00577 BKD09_RS03865 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000101|IPR029055 Gamma-glutamyltranspeptidase|Nucleophile aminohydrolases, N-terminal GO:0003840|GO:0006749 PF01019|PR01210|PS00462|SSF56235|TIGR00066 BKD09_RS03870 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR011102|IPR013656 PAS domain|PAS fold-4|Signal transduction histidine kinase, HWE region GO:0004673 G3DSA:3.30.450.20|PF07536|PF08448|SM00911|SSF55785 BKD09_RS03875 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002477|IPR009003 Peptidase S1, PA clan|Peptidoglycan binding-like G3DSA:1.10.101.10|G3DSA:2.40.10.10|PF01471|SSF47090|SSF50494 BKD09_RS03880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000594|IPR016040 NAD(P)-binding domain|THIF-type NAD/FAD binding fold GO:0008641 G3DSA:3.40.50.720|PF00899|SSF69572 BKD09_RS03885 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023210 NADP-dependent oxidoreductase domain G3DSA:3.20.20.100|PF00248|SSF51430 BKD09_RS03890 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 BKD09_RS03895 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006139|IPR006140|IPR016040|IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF00389|PF02826|PS00065|SSF51735|SSF52283 BKD09_RS03900 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010466 Protein of unknown function DUF1058 PF06347 BKD09_RS03905 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002481|IPR011991 Ferric-uptake regulator|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01475|SSF46785 BKD09_RS03910 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010083|IPR013114|IPR029069 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA|Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ|HotDog domain GO:0005737|GO:0006633|GO:0008693 G3DSA:3.10.129.10|MF_00405|PF07977|SSF54637|TIGR01749 BKD09_RS03915 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014030|IPR014031|IPR016039|IPR018201|IPR020841 Beta-ketoacyl synthase, C-terminal|Beta-ketoacyl synthase, N-terminal|Beta-ketoacyl synthase, active site|Polyketide synthase, beta-ketoacyl synthase domain|Thiolase-like GO:0003824|GO:0008152 G3DSA:3.40.47.10|PF00109|PF02801|PS00606|SM00825|SSF53901 BKD09_RS03920 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR014358|IPR016040 Enoyl-[acyl-carrier-protein] reductase (NADH)|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR GO:0004318|GO:0006633|GO:0055114 G3DSA:3.40.50.720|PF13561|PIRSF000094|PR00081|SSF51735 BKD09_RS03925 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004045|IPR010987|IPR012336 Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF02798|PF13410|SSF47616|SSF52833 BKD09_RS03940 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13673|SSF55729 BKD09_RS03945 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS03950 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000763|IPR002016|IPR010255|IPR019793|IPR019794 Catalase-peroxidase haem|Haem peroxidase|Haem peroxidase, plant/fungal/bacterial|Peroxidase, active site|Peroxidases heam-ligand binding site GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 G3DSA:1.10.420.10|G3DSA:1.10.520.10|MF_01961|PF00141|PR00458|PR00460|PS00435|PS00436|SSF48113|TIGR00198 BKD09_RS03955 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001247|IPR003029|IPR004087|IPR004088|IPR012162|IPR012340|IPR015847|IPR015848|IPR020568|IPR022967|IPR027408 Exoribonuclease, phosphorolytic domain 1|Exoribonuclease, phosphorolytic domain 2|K Homology domain|K Homology domain, type 1|Nucleic acid-binding, OB-fold|PNPase/RNase PH domain|Polyribonucleotide nucleotidyltransferase|Polyribonucleotide nucleotidyltransferase, RNA-binding domain|RNA-binding domain, S1|Ribosomal protein S5 domain 2-type fold|S1 domain GO:0000175|GO:0003676|GO:0003723|GO:0004654|GO:0006396|GO:0006402 G3DSA:1.10.10.400|G3DSA:2.40.50.140|G3DSA:3.30.1370.10|G3DSA:3.30.230.70|MF_01595|PF00013|PF00575|PF01138|PF03725|PF03726|PIRSF005499|SM00316|SM00322|SSF46915|SSF50249|SSF54211|SSF54791|SSF55666|TIGR03591 BKD09_RS03960 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000589|IPR005290|IPR009068 Ribosomal protein S15|Ribosomal protein S15, bacterial-type|S15/NS1, RNA-binding GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.10.287.10|MF_01343_B|PD157043|PF00312|PS00362|SM01387|SSF47060|TIGR00952 BKD09_RS03965 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002501|IPR014780|IPR015240|IPR015947|IPR020103|IPR032819 PUA-like domain|Pseudouridine synthase II, N-terminal|Pseudouridine synthase, catalytic domain|tRNA pseudouridine synthase II, TruB|tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal|tRNA pseudouridylate synthase B, C-terminal GO:0001522|GO:0003723|GO:0006396|GO:0009451|GO:0009982 G3DSA:2.30.130.10|MF_01080|PF01509|PF09157|PF16198|SSF55120|TIGR00431 BKD09_RS03970 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000238|IPR015946|IPR020053|IPR023799 K homology domain-like, alpha/beta|Ribosome-binding factor A|Ribosome-binding factor A domain|Ribosome-binding factor A, conserved site GO:0006364 G3DSA:3.30.300.20|MF_00003|PD007327|PF02033|PS01319|SSF89919|TIGR00082 BKD09_RS03975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000178|IPR004161|IPR005225|IPR006847|IPR009000|IPR013575|IPR023115|IPR027417 Initiation factor 2 associated domain, bacterial|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Translation elongation factor EFTu-like, domain 2|Translation initiation factor IF- 2, domain 3|Translation initiation factor IF-2, N-terminal|Translation initiation factor aIF-2, bacterial-like|Translation protein, beta-barrel domain GO:0003743|GO:0005525|GO:0005622|GO:0006413 G3DSA:2.40.30.10|G3DSA:3.40.50.10050|G3DSA:3.40.50.300|MF_00100_B|PF00009|PF03144|PF04760|PF08364|PF11987|PS01176|SSF50447|SSF52156|SSF52540|TIGR00231|TIGR00487 BKD09_RS03980 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007393|IPR029064 50S ribosomal protein L30e-like|Domain of unknown function DUF448 G3DSA:3.30.1230.10|G3DSA:3.30.1330.30|PF04296|SSF55315|SSF64376 BKD09_RS03985 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003029|IPR004087|IPR009019|IPR010213|IPR010214|IPR010995|IPR012340|IPR013735|IPR015946|IPR022967|IPR025249|IPR030842 DNA repair Rad51/transcription factor NusA, alpha-helical|K Homology domain|K homology domain, prokaryotic type|K homology domain-like, alpha/beta|KH domain, NusA-like|Nucleic acid-binding, OB-fold|RNA-binding domain, S1|S1 domain|Transcription factor NusA, N-terminal|Transcription termination factor NusA|Transcription termination factor NusA, C-terminal duplication|Transcription termination/antitermination protein NusA, bacterial GO:0000166|GO:0003676|GO:0003700|GO:0003723|GO:0006353|GO:0031554|GO:0031564 G3DSA:1.10.150.20|G3DSA:2.40.50.140|G3DSA:3.30.1480.10|G3DSA:3.30.300.20|MF_00945_B|PF00575|PF08529|PF13184|PF14520|SM00316|SM00322|SSF47794|SSF50249|SSF54814|SSF69705|TIGR01953|TIGR01954 BKD09_RS03990 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003728|IPR028989|IPR028998 Ribosome maturation factor RimP|Ribosome maturation factor RimP, C-terminal|Ribosome maturation factor RimP, N-terminal GO:0042274 G3DSA:2.30.30.180|G3DSA:3.30.300.70|MF_01077|PF02576|SSF74942|SSF75420 BKD09_RS03995 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019285 Protein of unknown function DUF2336 PF10098 BKD09_RS04000 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003358|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 G3DSA:3.40.50.150|MF_01057|PF02390|SSF53335|TIGR00091 BKD09_RS04005 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001261|IPR002933|IPR011650|IPR017150 ArgE/DapE/ACY1/CPG2/YscS, conserved site|Peptidase M20|Peptidase M20, dimerisation domain|Peptidase M20, glutamate carboxypeptidase GO:0006508|GO:0008152|GO:0008237|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PIRSF037238|PS00758|SSF53187|SSF55031 BKD09_RS04010 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413 BKD09_RS04015 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003010|IPR004563 Apolipoprotein N-acyltransferase|Carbon-nitrogen hydrolase GO:0006807|GO:0016021|GO:0016410|GO:0016810|GO:0042158 G3DSA:3.60.110.10|MF_01148|PF00795|SSF56317|TIGR00546 BKD09_RS04020 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000644|IPR005170|IPR016166|IPR016169 CBS domain|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD-binding, type 2|Transporter-associated domain GO:0003824|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.10.580.10|G3DSA:3.30.465.10|PF00571|PF03471|SM00116|SM01091|SSF54631|SSF56176 BKD09_RS04025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002036|IPR020549|IPR023091 Endoribonuclease YbeY|Endoribonuclease YbeY, conserved site|Metalloprotease catalytic domain, predicted GO:0004222|GO:0006364 G3DSA:3.40.390.30|MF_00009|PF02130|PS01306|SSF55486|TIGR00043 BKD09_RS04030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003714|IPR004088|IPR027417 K Homology domain, type 1|P-loop containing nucleoside triphosphate hydrolase|PhoH-like protein GO:0003723|GO:0005524 G3DSA:3.30.1370.10|G3DSA:3.40.50.300|PF02562|SSF52540|SSF54791 BKD09_RS04035 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002792|IPR005839|IPR006463|IPR006638|IPR007197|IPR013848|IPR020612|IPR023404 Elongator protein 3/MiaB/NifB|Methylthiotransferase|Methylthiotransferase, N-terminal|Methylthiotransferase, conserved site|Radical SAM|Radical SAM, alpha/beta horseshoe|TRAM domain|tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0003824|GO:0005737|GO:0006400|GO:0009451|GO:0016740|GO:0043412|GO:0051536|GO:0051539 G3DSA:3.80.30.20|MF_01864|PF00919|PF01938|PF04055|PS01278|SM00729|SSF102114|TIGR00089|TIGR01574 BKD09_RS04040 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006439|IPR023198|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain|Phosphoglycolate phosphatase, domain 2 GO:0008152|GO:0016787 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|SSF56784|TIGR01509 BKD09_RS04045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002481|IPR011991 Ferric-uptake regulator|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01475|SSF46785 BKD09_RS04050 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR006464|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain|Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0008080|GO:0016407 G3DSA:3.40.630.30|PF00583|SSF55729|TIGR01575 BKD09_RS04055 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000905|IPR022496 Gcp-like domain|tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 G3DSA:3.30.420.40|PF00814|SSF53067|TIGR03725 BKD09_RS04060 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR001610|IPR004089|IPR004090|IPR013655 Chemotaxis methyl-accepting receptor|Methyl-accepting chemotaxis protein (MCP) signalling domain|PAC motif|PAS domain|PAS fold-3 GO:0004871|GO:0005515|GO:0006935|GO:0007165|GO:0016020 G3DSA:1.10.287.950|G3DSA:3.30.450.20|PF00015|PF08447|PR00260|SM00086|SM00091|SM00283|SSF55785|SSF58104|TIGR00229 BKD09_RS04065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001075|IPR014824 NIF system FeS cluster assembly, NifU, C-terminal|Scaffold protein Nfu/NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 G3DSA:3.30.1370.70|PD002830|PF01106|PF08712|PIRSF036773|SM00932|SSF110836|SSF117916 BKD09_RS04070 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|SSF52402 BKD09_RS04075 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001412|IPR002305|IPR002306|IPR014729|IPR024109 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ic|Rossmann-like alpha/beta/alpha sandwich fold|Tryptophan-tRNA ligase|Tryptophan-tRNA ligase, bacterial-type GO:0000166|GO:0004812|GO:0004830|GO:0005524|GO:0005737|GO:0006418|GO:0006436 G3DSA:1.10.240.10|G3DSA:3.40.50.620|MF_00140_B|PF00579|PR01039|PS00178|SSF52374|TIGR00233 BKD09_RS04080 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004268 Peptidoglycan biosynthesis protein MurJ PF03023|PIRSF002869|PR01806|TIGR01695 BKD09_RS04085 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002173|IPR011611|IPR029056 Carbohydrate kinase PfkB|Carbohydrate/puine kinase, PfkB, conserved site|Ribokinase-like GO:0016773 G3DSA:3.40.1190.20|PF00294|PS00584|SSF53613 BKD09_RS04090 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801 BKD09_RS04095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001466|IPR012338 Beta-lactamase-related|Beta-lactamase/transpeptidase-like G3DSA:3.40.710.10|PF00144|SSF56601 BKD09_RS04105 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010102|IPR015590|IPR016160|IPR016161|IPR016162|IPR016163|IPR029510 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase|Succinate semialdehyde dehydrogenase GO:0008152|GO:0009013|GO:0009450|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|PS00687|SSF53720|TIGR01780 BKD09_RS04110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR018060 DNA binding HTH domain, AraC-type|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|SM00342|SSF46689 BKD09_RS04115 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016040 NAD(P)-binding domain G3DSA:3.40.50.720|PF13460|SSF51735 BKD09_RS04120 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009959|IPR032710 NTF2-like domain|Polyketide cyclase SnoaL-like domain G3DSA:3.10.450.50|PF12680|SSF54427 BKD09_RS04125 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000595|IPR002645|IPR011547|IPR014710|IPR018488|IPR018490 Cyclic nucleotide-binding domain|Cyclic nucleotide-binding, conserved site|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|SLC26A/SulP transporter domain|STAS domain GO:0008272|GO:0015116|GO:0016021 G3DSA:2.60.120.10|G3DSA:3.30.750.24|PF00027|PF00916|PF01740|PS00889|SM00100|SSF51206|SSF52091 BKD09_RS04130 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001636|IPR013816|IPR018236|IPR028923 ATP-grasp fold, subdomain 2|Phosphoribosylaminoimidazole-succinocarboxamide synthase|SAICAR synthetase, conserved site|SAICAR synthetase/ADE2, N-terminal GO:0004639|GO:0005524|GO:0006164 G3DSA:3.30.200.20|G3DSA:3.30.470.20|MF_00137|PF01259|PS01057|PS01058|SSF56104|TIGR00081 BKD09_RS04135 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003829|IPR008778|IPR011051|IPR012093|IPR014710 Pirin|Pirin, C-terminal domain|Pirin, N-terminal domain|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF02678|PF05726|PIRSF006232|SSF51182 BKD09_RS04140 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13302|SSF55729 BKD09_RS04145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR016981|IPR018060|IPR018062|IPR020449 DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Transcription regulator HTH, AraC- type|Transcription regulator, AraC, predicted GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PIRSF031684|PR00032|PS00041|SM00342|SSF46689 BKD09_RS04150 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001466|IPR012338 Beta-lactamase-related|Beta-lactamase/transpeptidase-like G3DSA:3.40.710.10|PF00144|SSF56601 BKD09_RS04155 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005656 MmgE/PrpD GO:0016829 G3DSA:3.30.1330.120|PF03972|SSF103378 BKD09_RS04160 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 PF04632 BKD09_RS04165 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018958 SMI1/KNR4-like domain G3DSA:3.40.1580.10|PF09346|SM00860|SSF160631 BKD09_RS04170 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001853|IPR012336|IPR014440 DSBA-like thioredoxin domain|HCCA isomerase/glutathione S-transferase kappa|Thioredoxin-like fold GO:0015035 G3DSA:3.40.30.10|PF01323|PIRSF006386|SSF52833 BKD09_RS04175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|PIRSF006603|TIGR00797 BKD09_RS04180 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001986|IPR005750|IPR013792 Enolpyruvate transferase domain|RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta|UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0003824|GO:0008760|GO:0016765|GO:0019277 G3DSA:3.65.10.10|MF_00111|PF00275|SSF55205|TIGR01072 BKD09_RS04190 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000565|IPR001241|IPR002288|IPR003594|IPR006171|IPR011557|IPR013506|IPR013759|IPR013760|IPR014721|IPR018522|IPR020568 DNA gyrase B subunit, C-terminal|DNA gyrase, subunit B|DNA topoisomerase, type IIA|DNA topoisomerase, type IIA, central domain|DNA topoisomerase, type IIA, conserved site|DNA topoisomerase, type IIA, subunit B|DNA topoisomerase, type IIA, subunit B, domain 2|DNA topoisomerase, type IIA-like domain|Histidine kinase-like ATPase, C-terminal domain|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Toprim domain GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 G3DSA:3.30.230.10|G3DSA:3.30.565.10|G3DSA:3.40.50.670|MF_01898|PF00204|PF00986|PF01751|PF02518|PR00418|PR01159|PS00177|SM00387|SM00433|SSF54211|SSF55874|SSF56719|TIGR01059 BKD09_RS04200 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000917|IPR017849|IPR017850|IPR024607 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Sulfatase, N-terminal|Sulfatase, conserved site GO:0003824|GO:0008152|GO:0008484 G3DSA:3.30.1120.10|G3DSA:3.40.720.10|PF00884|PS00523|SSF53649 BKD09_RS04215 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001238|IPR003395|IPR018078|IPR027417 DNA-binding, RecF|DNA-binding, RecF, conserved site|P-loop containing nucleoside triphosphate hydrolase|RecF/RecN/SMC, N-terminal GO:0003697|GO:0005524|GO:0006281 G3DSA:3.40.50.300|MF_00365|PF02463|PS00617|PS00618|SSF52540|TIGR00611 BKD09_RS04220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001001|IPR022634|IPR022635|IPR022637 DNA polymerase III, beta chain|DNA polymerase III, beta chain, C-terminal|DNA polymerase III, beta chain, N-terminal|DNA polymerase III, beta chain, central GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 G3DSA:3.10.150.10|PF00712|PF02767|PF02768|PIRSF000804|SM00480|SSF55979|TIGR00663 BKD09_RS04225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001957|IPR003593|IPR010921|IPR013159|IPR013317|IPR018312|IPR020591|IPR024633|IPR027417 AAA+ ATPase domain|Chromosomal replication control, initiator DnaA|Chromosomal replication control, initiator DnaA, conserved site|Chromosomal replication control, initiator DnaA-like|Chromosomal replication initiator protein DnaA|Chromosomal replication initiator, DnaA C-terminal|DnaA N-terminal domain|P-loop containing nucleoside triphosphate hydrolase|Trp repressor/replication initiator GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275|GO:0043565 G3DSA:1.10.1750.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00377|PF00308|PF08299|PF11638|PR00051|PS01008|SM00382|SM00760|SSF48295|SSF52540|TIGR00362 BKD09_RS04230 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.20.58.110|MF_00500|PD004231|PF01649|SSF46992|TIGR00029 BKD09_RS04240 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 G3DSA:3.30.1060.10|MF_01401|PF01625|SSF55068|TIGR00401 BKD09_RS04245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003715|IPR019554 Polysaccharide export protein|Soluble ligand binding domain GO:0015159|GO:0015774|GO:0016020 G3DSA:3.10.560.10|G3DSA:3.30.1950.10|PF02563|PF10531 BKD09_RS04255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002925|IPR029058 Alpha/Beta hydrolase fold|Dienelactone hydrolase GO:0016787 G3DSA:3.40.50.1820|PF01738|SSF53474 BKD09_RS04265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|PR00111|SSF53474 BKD09_RS04270 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001041|IPR002888|IPR006058|IPR012675 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|[2Fe-2S]-binding GO:0009055|GO:0016491|GO:0046872|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.150.120|G3DSA:3.10.20.30|PF00111|PF01799|PS00197|SSF47741|SSF54292 BKD09_RS04275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000674|IPR008274|IPR012368|IPR019546 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding|Oxidoreductase molybdopterin-binding subunit, IorB-related|Twin-arginine translocation pathway, signal sequence, bacterial/archaeal GO:0016491|GO:0055114 G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF01315|PF02738|PIRSF036389|SM01008|SSF54665|SSF56003|TIGR01409 BKD09_RS04280 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003607|IPR006674|IPR006675|IPR011006 CheY-like superfamily|HD domain|HD/PDEase domain|HDIG domain G3DSA:1.10.3210.10|G3DSA:3.40.50.2300|PF13487|SM00471|SSF109604|SSF52172|TIGR00277 BKD09_RS04285 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801 BKD09_RS04290 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|SSF54593 BKD09_RS04295 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 BKD09_RS04300 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021937 Protein of unknown function DUF3551 PF12071 BKD09_RS04305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021937 Protein of unknown function DUF3551 PF12071 BKD09_RS04310 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001845|IPR011991 HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12840|PR00778|SM00418|SSF46785 BKD09_RS04315 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013538|IPR023393 Activator of Hsp90 ATPase homologue 1-like|START-like domain GO:0006950 G3DSA:3.30.530.20|PF08327|SSF55961 BKD09_RS04320 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010296|IPR012336 Protein of unknown function DUF899, thioredoxin-like|Thioredoxin-like fold G3DSA:3.40.30.10|PF05988|SSF52833 BKD09_RS04325 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001940|IPR009003 Peptidase S1, PA clan|Peptidase S1C GO:0004252|GO:0006508 G3DSA:2.40.10.10|PF13365|PR00834|SSF50494 BKD09_RS04335 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001845|IPR011991|IPR027395 HTH ArsR-type DNA-binding domain|Winged helix DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF13601|SM00418|SSF46785 BKD09_RS04340 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001441|IPR018520 Decaprenyl diphosphate synthase-like|Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 G3DSA:3.40.1180.10|MF_01139|PF01255|PS01066|SSF64005|TIGR00055 BKD09_RS04345 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 BKD09_RS04350 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000595|IPR014710|IPR018490 Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF00027|SSF51206 BKD09_RS04355 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|SSF56300 BKD09_RS04360 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005019|IPR011257 DNA glycosylase|Methyladenine glycosylase GO:0003824|GO:0006281|GO:0006284|GO:0008725 G3DSA:1.10.340.30|PF03352|SSF48150 BKD09_RS04365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010753|IPR011008 Dimeric alpha-beta barrel|Domain of unknown function DUF1330 G3DSA:3.30.70.900|PF07045|SSF54909 BKD09_RS04375 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001126|IPR017961|IPR022880|IPR024728 DNA polymerase IV|DNA polymerase type-Y, HhH motif|DNA polymerase, Y-family, little finger domain|UmuC domain GO:0003684|GO:0003887|GO:0006281 G3DSA:1.10.150.20|G3DSA:3.30.1490.100|G3DSA:3.30.70.270|MF_01113|PF00817|PF11798|PF11799|SSF100879|SSF56672 BKD09_RS04380 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004307 TspO/MBR-related protein GO:0016021 PF03073|PIRSF005859 BKD09_RS04390 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012347 Ferritin-related G3DSA:1.20.1260.10|PF12902 BKD09_RS04400 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|SSF56300 BKD09_RS04410 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF12706|SM00849|SSF56281 BKD09_RS04420 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR000160|IPR013767|IPR029787 GGDEF domain|Nucleotide cyclase|PAS domain|PAS fold GO:0006355 G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00989|PF00990|SM00267|SSF55073|SSF55785|TIGR00229|TIGR00254 BKD09_RS04425 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR000160|IPR001633|IPR013656|IPR029787|IPR033479 Double Cache domain 1|EAL domain|GGDEF domain|Nucleotide cyclase|PAS domain|PAS fold-4 G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00563|PF00990|PF02743|PF08448|PF12860|SM00052|SM00091|SM00267|SSF141868|SSF55073|SSF55785|TIGR00229|TIGR00254 BKD09_RS04430 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS04435 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS04440 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS04445 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|PS00211|SM00382|SSF52540 BKD09_RS04450 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS04455 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR002078|IPR002197|IPR003593|IPR009057|IPR013656|IPR025662|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|PAS domain|PAS fold-4|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.30.450.20|G3DSA:3.40.50.300|PF00158|PF02954|PF08448|PR01590|PS00675|PS00676|PS00688|SM00382|SSF46689|SSF52540|SSF55785 BKD09_RS04460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR000160|IPR001633|IPR029787 EAL domain|GGDEF domain|Nucleotide cyclase|PAS domain G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00563|PF00990|SM00052|SM00267|SSF141868|SSF55073|SSF55785|TIGR00254 BKD09_RS04465 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 PF07536|SM00911 BKD09_RS04470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SSF51735 BKD09_RS04475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001128|IPR002401|IPR017972 Cytochrome P450|Cytochrome P450, E-class, group I|Cytochrome P450, conserved site GO:0005506|GO:0016705|GO:0020037|GO:0055114 G3DSA:1.10.630.10|PF00067|PR00385|PR00463|PS00086|SSF48264 BKD09_RS04480 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011251 Luciferase-like domain GO:0016705|GO:0055114 G3DSA:3.20.20.30|PF00296|SSF51679 BKD09_RS04485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004099|IPR016156|IPR023753 FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0016491|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF02852|PF07992|PIRSF000350|PR00368|PR00411|SSF51905|SSF55424 BKD09_RS04490 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS04495 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010126|IPR029058 Alpha/Beta hydrolase fold|Esterase, PHB depolymerase GO:0005576|GO:0016787 G3DSA:3.40.50.1820|PF10503|SSF53474|TIGR01840 BKD09_RS04505 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002577|IPR011991 Helix-turn-helix, HxlR type|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF01638|SSF46785 BKD09_RS04510 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|SM00849|SSF56281 BKD09_RS04515 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006047|IPR013780|IPR013781|IPR017853|IPR022567 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycosyl hydrolase, C-terminal (DUF3459)|Glycosyl hydrolase, all-beta|Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 G3DSA:2.60.40.1180|G3DSA:3.20.20.80|G3DSA:3.90.400.10|PF00128|PF11941|SM00642|SSF51011|SSF51445 BKD09_RS04520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009394 DNA repair protein MmcB-like PF06319|PIRSF031796 BKD09_RS04525 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR002197|IPR009057|IPR011006 CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0043565 G3DSA:1.10.10.60|G3DSA:3.40.50.2300|PF00072|PF02954|SM00448|SSF52172 BKD09_RS04530 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF02518|PR00344|SM00387|SM00388|SSF47384|SSF55874 BKD09_RS04535 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS04540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013525 ABC-2 type transporter GO:0016020 PF01061 BKD09_RS04545 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009656|IPR010915|IPR029058 Alpha/Beta hydrolase fold|PHB de-polymerase, C-terminal|Polyhydroxyalkanoate depolymerase G3DSA:3.40.50.1820|PF06850|PIRSF020818|SSF53474|TIGR01849 BKD09_RS04550 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002725 Protein of unknown function DUF45 PF01863 BKD09_RS04560 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001264|IPR001460|IPR012338|IPR023346 Beta-lactamase/transpeptidase-like|Glycosyl transferase, family 51|Lysozyme-like domain|Penicillin-binding protein, transpeptidase GO:0008658 G3DSA:1.10.3810.10|G3DSA:3.40.710.10|PF00905|PF00912|SSF53955|SSF56601|TIGR02074 BKD09_RS04565 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010753|IPR011008 Dimeric alpha-beta barrel|Domain of unknown function DUF1330 G3DSA:3.30.70.900|PF07045|SSF54909 BKD09_RS04570 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS04575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS04580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009732 Protein of unknown function DUF1304 PF06993 BKD09_RS04585 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001497|IPR008332|IPR011991|IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding|Methylated-DNA-[protein]-cysteine S-methyltransferase, active site|Methylguanine DNA methyltransferase, ribonuclease-like domain|Winged helix-turn-helix DNA-binding domain GO:0003824|GO:0003908|GO:0006281 G3DSA:1.10.10.10|PF01035|PS00374|SSF46767|SSF53155|TIGR00589 BKD09_RS04590 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002912|IPR002934|IPR003607|IPR006674|IPR010043|IPR013546 ACT domain|Bifunctional uridylyltransferase/uridylyl-removing enzyme|HD domain|HD/PDEase domain|PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase|Polymerase, nucleotidyl transferase domain GO:0006807|GO:0008152|GO:0008773|GO:0016597|GO:0016779 G3DSA:1.10.3210.10|G3DSA:3.30.460.10|G3DSA:3.30.70.260|MF_00277|PF01842|PF01909|PF01966|PF08335|PIRSF006288|SM00471|SSF55021|SSF81301|SSF81593|SSF81891|TIGR01693 BKD09_RS04595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001638|IPR010067|IPR015168 Aliphatic sulfonates-binding protein|Solute-binding protein family 3/N-terminal domain of MltF|SsuA/THI5-like GO:0006790|GO:0006810|GO:0016020 G3DSA:3.40.190.10|PF09084|SM00062|SSF53850|TIGR01728 BKD09_RS04600 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS04605 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS04610 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003718|IPR015946 K homology domain-like, alpha/beta|OsmC/Ohr family G3DSA:3.30.300.20|PF02566|SSF82784 BKD09_RS04625 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR001610|IPR004089|IPR004090|IPR013655 Chemotaxis methyl-accepting receptor|Methyl-accepting chemotaxis protein (MCP) signalling domain|PAC motif|PAS domain|PAS fold-3 GO:0004871|GO:0005515|GO:0006935|GO:0007165|GO:0016020 G3DSA:1.10.287.950|G3DSA:3.30.450.20|PF00015|PF08447|PR00260|SM00086|SM00091|SM00283|SSF55785|SSF58104|TIGR00229 BKD09_RS04630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000432|IPR005748|IPR007695|IPR007696|IPR007860|IPR007861|IPR016151|IPR027417 DNA mismatch repair protein MutS, C-terminal|DNA mismatch repair protein MutS, N-terminal|DNA mismatch repair protein MutS, clamp|DNA mismatch repair protein MutS, connector domain|DNA mismatch repair protein MutS, core|DNA mismatch repair protein MutS, type 1|DNA mismatch repair protein MutS-like, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006298|GO:0030983 G3DSA:1.10.1420.10|G3DSA:3.30.420.110|G3DSA:3.40.1170.10|G3DSA:3.40.50.300|MF_00096|PF00488|PF01624|PF05188|PF05190|PF05192|PIRSF037677|PS00486|SM00533|SM00534|SSF48334|SSF52540|SSF53150|SSF55271|TIGR01070 BKD09_RS04635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002155|IPR012793|IPR016039|IPR020610|IPR020613|IPR020615|IPR020616|IPR020617 Beta-ketoadipyl CoA thiolase|Thiolase|Thiolase, C-terminal|Thiolase, N-terminal|Thiolase, active site|Thiolase, acyl-enzyme intermediate active site|Thiolase, conserved site|Thiolase-like GO:0003824|GO:0008152|GO:0016747|GO:0019619 G3DSA:3.40.47.10|PF00108|PF02803|PIRSF000429|PS00098|PS00099|PS00737|SSF53901|TIGR01930|TIGR02430 BKD09_RS04640 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000627|IPR007535|IPR015889 Catechol dioxygenase, N-terminal|Intradiol ring-cleavage dioxygenase, C-terminal|Intradiol ring-cleavage dioxygenase, core GO:0003824|GO:0005506|GO:0006725|GO:0008199|GO:0009712|GO:0016702|GO:0018576|GO:0055114 G3DSA:2.60.130.10|PF00775|PF04444|SSF49482 BKD09_RS04645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000627|IPR012785|IPR015889|IPR024756 Intradiol ring-cleavage dioxygenase, C-terminal|Intradiol ring-cleavage dioxygenase, core|Protocatechuate 3,4-dioxygenase beta subunit, N-terminal|Protocatechuate 3,4-dioxygenase, beta subunit GO:0003824|GO:0005506|GO:0006725|GO:0008199|GO:0016702|GO:0018578|GO:0019619|GO:0055114 G3DSA:2.60.130.10|PF00775|PF12391|PS00083|SSF49482|TIGR02422 BKD09_RS04650 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000627|IPR012786|IPR015889 Intradiol ring-cleavage dioxygenase, C-terminal|Intradiol ring-cleavage dioxygenase, core|Protocatechuate 3,4-dioxygenase, alpha subunit GO:0003824|GO:0005506|GO:0006725|GO:0008199|GO:0016702|GO:0018578|GO:0019439|GO:0055114 G3DSA:2.60.130.10|PF00775|PS00083|SSF49482|TIGR02423 BKD09_RS04655 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003660|IPR004089|IPR004090 Chemotaxis methyl-accepting receptor|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PR00260|SM00283|SM00304|SSF58104 BKD09_RS04660 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004119|IPR011009|IPR015897 CHK kinase-like|Protein kinase-like domain|Protein of unknown function DUF227 G3DSA:3.90.1200.10|PF02958|SM00587|SSF56112 BKD09_RS04665 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004638|IPR011701|IPR020846 Drug resistance transporter EmrB/QacA subfamily|Major facilitator superfamily|Major facilitator superfamily domain GO:0006810|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473|TIGR00711 BKD09_RS04670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF00529|PF16576|SSF111369 BKD09_RS04675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PR00598|SM00347|SSF46785 BKD09_RS04680 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002481|IPR011991 Ferric-uptake regulator|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01475|SSF46785 BKD09_RS04685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 BKD09_RS04690 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004588|IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial|4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0005506|GO:0008299|GO:0016114|GO:0046429|GO:0055114 MF_00159|PF04551|PIRSF004640|TIGR00612 BKD09_RS04695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 G3DSA:3.60.130.10|PF02668|SSF51197 BKD09_RS04700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005532|IPR016187|IPR029030 C-type lectin fold|Caspase-like domain|Sulfatase-modifying factor enzyme G3DSA:3.40.50.1460|G3DSA:3.90.1580.10|PF00656|PF03781|SSF52129|SSF56436 BKD09_RS04710 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 G3DSA:3.40.630.40|PF01520|SM00646|SSF53187 BKD09_RS04715 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004705|IPR006153 Cation/H+ exchanger|Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021|GO:0055085 PF00999|TIGR00831 BKD09_RS04720 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000871|IPR012338|IPR023650 Beta-lactamase, class-A|Beta-lactamase, class-A active site|Beta-lactamase/transpeptidase-like GO:0008800|GO:0030655|GO:0046677 G3DSA:3.40.710.10|PF13354|PR00118|PS00146|SSF56601 BKD09_RS04725 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032710 NTF2-like domain G3DSA:3.10.450.50|PF12893|SSF54427 BKD09_RS04730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006913|IPR011057 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V|Mss4-like GO:0008152|GO:0016846 G3DSA:3.90.1590.10|PF04828|SSF51316 BKD09_RS04735 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029030 Caspase-like domain G3DSA:3.40.50.1460|PF00656|SSF52129 BKD09_RS04740 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009781 Protein of unknown function DUF1345 PF07077 BKD09_RS04745 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000092|IPR008949 Isoprenoid synthase domain|Polyprenyl synthetase GO:0008299 G3DSA:1.10.600.10|PF00348|PS00444|PS00723|SSF48576 BKD09_RS04750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001264|IPR011812|IPR023346 Glycosyl transferase, family 51|Lysozyme-like domain|Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 G3DSA:1.10.3810.10|PF00912|SSF53955|TIGR02070 BKD09_RS04755 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002677|IPR011332 Ribosomal protein L32p|Zinc-binding ribosomal protein GO:0003735|GO:0006412|GO:0015934 MF_00340|PF01783|SSF57829|TIGR01031 BKD09_RS04770 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000160|IPR001633|IPR029787 EAL domain|GGDEF domain|Nucleotide cyclase G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00563|PF00990|SM00052|SM00267|SSF141868|SSF55073|TIGR00254 BKD09_RS04775 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007138|IPR011008 Antibiotic biosynthesis monooxygenase domain|Dimeric alpha-beta barrel G3DSA:3.30.70.900|PF03992|SSF54909 BKD09_RS04780 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12802|SM00347|SSF46785 BKD09_RS04790 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR000160|IPR001633|IPR029787 EAL domain|GGDEF domain|Nucleotide cyclase|PAS domain G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00563|PF00990|PF12860|SM00052|SM00091|SM00267|SSF141868|SSF55073|SSF55785|TIGR00254 BKD09_RS04795 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|SSF55729 BKD09_RS04800 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 G3DSA:3.30.930.10|PF00587|SSF55681 BKD09_RS04805 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|PF00441|PF02771|SSF47203|SSF56645 BKD09_RS04810 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009081 Phosphopantetheine binding ACP domain G3DSA:1.10.1200.10|PF00550|SSF47336 BKD09_RS04815 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000845|IPR010044 Methylthioadenosine phosphorylase (MTAP)|Nucleoside phosphorylase domain GO:0003824|GO:0009116|GO:0017061 G3DSA:3.40.50.1580|MF_01963|PF01048|SSF53167|TIGR01694 BKD09_RS04820 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000649|IPR005251|IPR011559|IPR027363 Initiation factor 2B alpha/beta/delta|Initiation factor 2B-related|Methylthioribose-1-phosphate isomerase|Methylthioribose-1-phosphate isomerase-like, N-terminal domain GO:0044237|GO:0044249 G3DSA:1.20.120.420|G3DSA:3.40.50.10470|MF_01678|PF01008|SSF100950|TIGR00512|TIGR00524 BKD09_RS04825 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006439|IPR011945|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain|Predicted HAD-superfamily phosphatase, subfamily IA/Epoxide hydrolase, N-terminal GO:0008152|GO:0016787 G3DSA:3.40.50.1000|PF13419|PR00413|SSF56784|TIGR01509|TIGR02247 BKD09_RS04830 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001254|IPR001314|IPR009003|IPR033116 Peptidase S1, PA clan|Peptidase S1A, chymotrypsin family|Serine proteases, trypsin domain|Serine proteases, trypsin family, serine active site GO:0004252|GO:0006508 G3DSA:2.40.10.10|PF00089|PR00722|PS00135|SM00020|SSF50494 BKD09_RS04835 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR020946|IPR023753 FAD/NAD(P)-binding domain|Flavin monooxygenase-like GO:0004499|GO:0016491|GO:0050660|GO:0050661|GO:0055114 G3DSA:3.50.50.60|PF00743|PF13450|SSF51905 BKD09_RS04840 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|SM00421|SM00448|SSF46894|SSF52172 BKD09_RS04845 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR003594|IPR003661|IPR004358|IPR011006 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PR00344|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55874 BKD09_RS04850 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000709|IPR017777|IPR028082 ABC transporter, urea, substrate-binding, UrtA|Leu/Ile/Val-binding protein|Periplasmic binding protein-like I GO:0006865 G3DSA:3.40.50.2300|PF13433|PR00337|SSF53822|TIGR03407 BKD09_RS04855 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851|IPR017779 ABC transporter, permease|ABC transporter, urea permease protein UrtB, bacterial-type GO:0005215|GO:0006810|GO:0016020 PF02653|TIGR03409 BKD09_RS04860 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851|IPR017778 ABC transporter, permease|ABC transporter, urea, permease protein, UrtC GO:0005215|GO:0006810|GO:0016020 PF02653|TIGR03408 BKD09_RS04865 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR017781|IPR027417|IPR032823 ABC transporter, urea, ATP-binding protein, UrtD|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|SSF52540|TIGR03411 BKD09_RS04870 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017780|IPR027417 AAA+ ATPase domain|ABC transporter, urea, ATP-binding protein, UrtE|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|SM00382|SSF52540|TIGR03410 BKD09_RS04875 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004304 Acetamidase/Formamidase GO:0016811 G3DSA:2.60.120.580|PF03069|SSF141130 BKD09_RS04880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain PF09723|SM00834|TIGR02605 BKD09_RS04885 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 G3DSA:3.60.110.10|PF00795|SSF56317 BKD09_RS04890 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005546|IPR011050 Autotransporter beta-domain|Pectin lyase fold/virulence factor G3DSA:2.40.128.130|PF03797|SM00869|SSF103515|SSF51126 BKD09_RS04895 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003399 Mce/MlaD PF02470 BKD09_RS04900 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003781|IPR013816|IPR016040|IPR016102|IPR032875 ATP-grasp fold, subdomain 2|CoA-binding|NAD(P)-binding domain|Succinyl-CoA synthetase-like|Succinyl-CoA synthetase-like, flavodoxin domain GO:0005524|GO:0048037 G3DSA:3.30.470.20|G3DSA:3.40.50.261|G3DSA:3.40.50.720|PF13380|PF13549|PF13607|SM00881|SSF51735|SSF52210|SSF56059 BKD09_RS04905 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|SSF53448 BKD09_RS04910 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005754|IPR022445|IPR023365 Sortase domain|Sortase family|Sortase, proteobacterial type G3DSA:2.40.260.10|PF04203|SSF63817|TIGR03784 BKD09_RS04915 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002035|IPR013694|IPR022440 Conserved hypothetical protein CHP03788|VIT domain|von Willebrand factor, type A G3DSA:3.40.50.410|PF08487|PF13768|SM00327|SM00609|SSF53300|TIGR03788 BKD09_RS04920 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|SM00530|SSF47413 BKD09_RS04925 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029044 Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|SSF53448 BKD09_RS04930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS04935 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801 BKD09_RS04940 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|SSF47203|SSF56645 BKD09_RS04945 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006089|IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase, conserved site|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PIRSF016578|PS00072|PS00073|SSF47203|SSF56645 BKD09_RS04950 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004045|IPR010987|IPR012336 Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF02798|SSF47616|SSF52833 BKD09_RS04955 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR018060 DNA binding HTH domain, AraC-type|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|SM00342|SSF46689 BKD09_RS04960 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008567|IPR013785 3-keto-5-aminohexanoate cleavage enzyme|Aldolase-type TIM barrel GO:0003824|GO:0016740|GO:0019475 G3DSA:3.20.20.70|PF05853 BKD09_RS04965 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000022|IPR029045 Carboxyl transferase|ClpP/crotonase-like domain G3DSA:3.90.226.10|PF01039|SSF52096 BKD09_RS04970 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000089|IPR005479|IPR005481|IPR005482|IPR011053|IPR011054|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Biotin carboxylase, C-terminal|Biotin carboxylase-like, N-terminal domain|Biotin/lipoyl attachment|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain|Pre-ATP-grasp domain|Rudiment single hybrid motif|Single hybrid motif GO:0003824|GO:0005524 G3DSA:2.40.50.100|G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|PF00289|PF00364|PF02785|PF02786|PS00867|SM00878|SSF51230|SSF51246|SSF52440|SSF56059 BKD09_RS04980 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540|TIGR01727 BKD09_RS04985 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540|TIGR01727 BKD09_RS04990 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR025966 ABC transporter type 1, transmembrane domain MetI-like|Oligopeptide transport permease C-like, N-terminal domain GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PF12911|SSF161098 BKD09_RS04995 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS05000 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|SSF53850 BKD09_RS05005 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801 BKD09_RS05010 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001670|IPR018211 Alcohol dehydrogenase, iron-type|Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 G3DSA:1.20.1090.10|G3DSA:3.40.50.1970|PF00465|PS00060|SSF56796 BKD09_RS05015 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|SSF111369|TIGR01730 BKD09_RS05020 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001036|IPR004764|IPR027463 Acriflavin resistance protein|Hydrophobe/amphiphile efflux-1 HAE1|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3850.10|G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|SSF82693|SSF82714|SSF82866|TIGR00915 BKD09_RS05025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS05030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001129|IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain|Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein G3DSA:1.20.120.550|PF01124|SSF161084 BKD09_RS05035 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010791|IPR023374|IPR033451 AttH domain|AttH, lipocalin-like domain|AttH-like domain G3DSA:2.40.370.10|PF07143|PF17186|SSF159245 BKD09_RS05040 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003838 ABC transporter permease protein domain GO:0016020 PF02687 BKD09_RS05045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS05050 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS05055 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011059|IPR013108|IPR032466 Amidohydrolase 3|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF07969|SSF51338|SSF51556 BKD09_RS05060 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS05065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279|IPR001763 Metallo-beta-lactamase|Rhodanese-like domain G3DSA:3.40.250.10|G3DSA:3.60.15.10|PF00581|PF00753|SM00450|SM00849|SSF52821|SSF56281 BKD09_RS05070 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027396 DsrEFH-like G3DSA:3.40.1260.10|SSF75169 BKD09_RS05075 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004843|IPR006179|IPR008334|IPR029052|IPR030998 5'-Nucleotidase, C-terminal|5'-Nucleotidase/apyrase|Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like|Thiosulfohydrolase SoxB GO:0009166|GO:0016787 G3DSA:3.60.21.10|G3DSA:3.90.780.10|PF00149|PF02872|PR01607|SSF55816|SSF56300|TIGR04486 BKD09_RS05085 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009056|IPR025710 Cytochrome c-like domain|SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 G3DSA:1.10.760.10|PIRSF038455|SSF46626|TIGR04484 BKD09_RS05090 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013783|IPR014756|IPR014880|IPR030995 Immunoglobulin E-set|Immunoglobulin-like fold|Sulphur oxidation protein SoxZ|Thiosulfate oxidation carrier complex protein SoxZ G3DSA:2.60.40.10|PF08770|SSF81296|TIGR04490 BKD09_RS05095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016568|IPR032711 Ig-like SoxY domain|Sulphur oxidation, SoxY PF13501|PIRSF010312|TIGR04488 BKD09_RS05100 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009056|IPR030999 Cytochrome c-like domain|Sulfur oxidation c-type cytochrome SoxX GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF00034|SSF46626|TIGR04485 BKD09_RS05105 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010342|IPR029063 Protein of unknown function DUF938|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF06080|SSF53335 BKD09_RS05110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001375|IPR002470|IPR023302|IPR029058 Alpha/Beta hydrolase fold|Peptidase S9, prolyl oligopeptidase, catalytic domain|Peptidase S9A, N-terminal domain|Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508|GO:0008236|GO:0070008 G3DSA:3.40.50.1820|PF00326|PF02897|PR00862|SSF50993|SSF53474 BKD09_RS05115 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS05120 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS05125 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004360|IPR018146|IPR029068 Glyoxalase I, conserved site|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain GO:0004462|GO:0046872 G3DSA:3.10.180.10|PF00903|PS00934|SSF54593 BKD09_RS05130 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003779|IPR029032 AhpD-like|Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 G3DSA:1.20.1290.10|PF02627|SSF69118 BKD09_RS05135 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|SSF47203|SSF56645 BKD09_RS05140 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|SSF47203|SSF56645 BKD09_RS05145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001638|IPR018313 Solute-binding protein family 3/N-terminal domain of MltF|Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 G3DSA:3.40.190.10|PF00497|PS01039|SM00062|SSF53850 BKD09_RS05150 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005490 L,D-transpeptidase catalytic domain GO:0016740 G3DSA:2.40.440.10|PF03734|SSF141523 BKD09_RS05160 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000866|IPR012336 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF00578|SSF52833 BKD09_RS05165 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 PF02683 BKD09_RS05175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007627|IPR007630|IPR011991|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 4|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF04545|SSF88659|SSF88946|TIGR02937 BKD09_RS05180 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF46894|SSF52172 BKD09_RS05185 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR003594|IPR003661|IPR004358|IPR011006|IPR021800|IPR029016 CheY-like superfamily|Domain of unknown function DUF3369|GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.40|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PF11849|PR00344|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55781|SSF55874 BKD09_RS05190 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003594|IPR003660|IPR004358 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase-related protein, C-terminal GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:3.30.565.10|PF00672|PF02518|PR00344|SM00304|SM00387|SSF158472|SSF55874 BKD09_RS05195 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004682|IPR018389 TRAP transporter solute receptor DctP/TeaA|TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 PF03480|PIRSF006470|TIGR00787 BKD09_RS05200 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.40.190.10|PF13416|SSF53850 BKD09_RS05205 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002575|IPR011009|IPR016259 Aminoglycoside phosphotransferase|Hygromycin-B kinase|Protein kinase-like domain G3DSA:3.90.1200.10|PF01636|PIRSF000707|SSF56112 BKD09_RS05210 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|PF00496|PIRSF002741|SSF53850 BKD09_RS05215 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS05220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR025966 ABC transporter type 1, transmembrane domain MetI-like|Oligopeptide transport permease C-like, N-terminal domain GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PF12911|SSF161098 BKD09_RS05225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540 BKD09_RS05230 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025148 Protein of unknown function DUF4089 PF13318 BKD09_RS05235 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014087|IPR023631 Amidase signature domain|Amidohydrolase, AtzE type G3DSA:3.90.1300.10|PF01425|SSF75304|TIGR02715 BKD09_RS05240 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR024507|IPR032710 NTF2-like domain|Protein of unknown function DUF3225 G3DSA:3.10.450.50|PF11533|SSF54427 BKD09_RS05245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|SM00345|SM00895|SSF46785|SSF48008 BKD09_RS05250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014085|IPR023631 Allophanate hydrolase|Amidase signature domain G3DSA:3.90.1300.10|PF01425|SSF75304|TIGR02713 BKD09_RS05255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12802|PR00598|SM00347|SSF46785 BKD09_RS05260 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR020845 AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.40.50.980|PF00501|PS00455|SSF56801 BKD09_RS05265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12802|PR00598|SM00347|SSF46785 BKD09_RS05270 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001128|IPR002397|IPR017972 Cytochrome P450|Cytochrome P450, B-class|Cytochrome P450, conserved site GO:0005506|GO:0016705|GO:0020037|GO:0055114 G3DSA:1.10.630.10|PF00067|PR00359|PS00086|SSF48264 BKD09_RS05275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001041|IPR001055|IPR012675 2Fe-2S ferredoxin-type iron-sulfur binding domain|Adrenodoxin|Beta-grasp domain GO:0009055|GO:0051536|GO:0051537 G3DSA:3.10.20.30|PF00111|PR00355|SSF54292 BKD09_RS05280 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS05285 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF07992|PR00368|PR00411|SSF51905 BKD09_RS05290 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS05295 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004360|IPR013022|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain|Xylose isomerase-like, TIM barrel domain G3DSA:3.10.180.10|G3DSA:3.20.20.150|PF00903|PF01261|PF14696|SSF51658|SSF54593 BKD09_RS05300 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|SM00382|SSF52540 BKD09_RS05305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|SM00382|SSF52540 BKD09_RS05310 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS05315 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS05320 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000709|IPR028081|IPR028082 Leu/Ile/Val-binding protein|Leucine-binding protein domain|Periplasmic binding protein-like I GO:0006865 G3DSA:3.40.50.2300|PF13458|PR00337|SSF53822 BKD09_RS05325 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011342|IPR013708|IPR016040|IPR022893 NAD(P)-binding domain|Shikimate dehydrogenase|Shikimate dehydrogenase family|Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0019632|GO:0050661|GO:0055114 G3DSA:3.40.192.10|G3DSA:3.40.50.720|MF_00222|PF08501|SSF51735|SSF53223|TIGR00507 BKD09_RS05330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 BKD09_RS05340 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR005143|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription factor LuxR-like, autoinducer-binding domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.80|PF00196|PF03472|PR00038|SM00421|SSF46894|SSF75516 BKD09_RS05345 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001690|IPR016181 Acyl-CoA N-acyltransferase|Autoinducer synthase GO:0016740 G3DSA:3.40.630.30|PF00765|PR01549|SSF55729 BKD09_RS05355 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS05360 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS05365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|SM00382|SSF52540 BKD09_RS05370 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS05375 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR018060|IPR018062|IPR020449 DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PR00032|PS00041|SM00342|SSF46689 BKD09_RS05380 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000531|IPR010105|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|SSF56935|TIGR01783 BKD09_RS05385 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008146|IPR008147|IPR014746 Glutamine synthetase, beta-Grasp domain|Glutamine synthetase, catalytic domain|Glutamine synthetase/guanido kinase, catalytic domain GO:0003824|GO:0004356|GO:0006542|GO:0006807 G3DSA:3.10.20.70|G3DSA:3.30.590.10|PF00120|SM01230|SSF54368|SSF55931 BKD09_RS05390 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 G3DSA:2.102.10.10|PF00355|SSF50022|SSF55961 BKD09_RS05395 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005471|IPR011991|IPR012794|IPR014757|IPR029016 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR|GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355|GO:0045893|GO:0046278 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|SM00346|SSF46785|SSF55781|TIGR02431 BKD09_RS05400 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011033|IPR027275 PRC-barrel domain|PRC-barrel-like G3DSA:2.30.30.240|PF05239|SSF50346 BKD09_RS05405 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003148|IPR006153|IPR016040 Cation/H+ exchanger|NAD(P)-binding domain|Regulator of K+ conductance, N-terminal GO:0006812|GO:0006813|GO:0015299|GO:0016021|GO:0055085 G3DSA:3.40.50.720|PF00999|PF02254|SSF51735 BKD09_RS05415 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001486|IPR009050|IPR012292 Globin-like|Globin/Protoglobin|Truncated hemoglobin GO:0019825|GO:0020037 G3DSA:1.10.490.10|PF01152|SSF46458 BKD09_RS05420 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000623|IPR001387|IPR010982|IPR023000|IPR027417|IPR031322 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain|P-loop containing nucleoside triphosphate hydrolase|Shikimate kinase, conserved site|Shikimate kinase/Threonine synthase-like 1|Shikimate kinase/gluconokinase GO:0003677|GO:0043565 G3DSA:1.10.260.40|G3DSA:3.40.50.300|MF_00109|PF01202|PF13560|PR01100|PS01128|SM00530|SSF47413|SSF52540 BKD09_RS05425 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR011957|IPR025110 AMP-binding enzyme C-terminal domain|AMP-dependent synthetase/ligase|Benzoate-CoA ligase family GO:0003824|GO:0005524|GO:0008152|GO:0016405 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|SSF56801|TIGR02262 BKD09_RS05430 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|SSF53474 BKD09_RS05435 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005500|IPR023203 Protein of unknown function DUF309|TTHA0068-like domain G3DSA:1.10.3450.10|PF03745|SSF140663 BKD09_RS05440 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001753|IPR017633|IPR029045 Benzoyl-CoA-dihydrodiol lyase|ClpP/crotonase-like domain|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|SSF52096|TIGR03222 BKD09_RS05445 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009078|IPR012347|IPR017635 Benzoyl-CoA oxygenase, B subunit|Ferritin-like superfamily|Ferritin-related G3DSA:1.20.1260.10|SSF47240|TIGR03225 BKD09_RS05450 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00080|PR00081|SSF51735 BKD09_RS05455 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002509|IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF01522|SSF88713 BKD09_RS05460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006664|IPR006665 OmpA-like domain|Outer membrane protein, bacterial GO:0009279|GO:0016021 G3DSA:3.30.1330.60|PF00691|PR01021|PR01023|SSF103088 BKD09_RS05470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PF16925|SSF46689|SSF48498 BKD09_RS05475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR000639|IPR023594|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Epoxide hydrolase-like|Haloalkane dehalogenase, subfamily 2 GO:0003824|GO:0018786 G3DSA:3.40.50.1820|MF_01231|PF00561|PR00412|SSF53474 BKD09_RS05480 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011893|IPR012336 Selenoprotein, Rdx type|Thioredoxin-like fold G3DSA:3.40.30.10|PF10262|SSF52833|TIGR02174 BKD09_RS05485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD PF03706 BKD09_RS05490 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|PAS domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF02518|PR00344|SM00387|SM00388|SSF47384|SSF55785|SSF55874 BKD09_RS05495 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005673|IPR024370 ABC transporter, phosphate-binding protein PstS|PBP domain GO:0035435|GO:0042301|GO:0043190 G3DSA:3.40.190.10|PF12849|PIRSF002756|SSF53850|TIGR00975 BKD09_RS05500 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR011864 ABC transporter type 1, transmembrane domain MetI-like|Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006810|GO:0006817|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR02138 BKD09_RS05505 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR005672 ABC transporter type 1, transmembrane domain MetI-like|Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0006810|GO:0016020|GO:0035435 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR00974 BKD09_RS05510 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR005670|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase|Phosphate transport system permease protein 1 GO:0005315|GO:0005524|GO:0016020|GO:0016887|GO:0035435 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540|TIGR00972 BKD09_RS05515 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR026022|IPR028366 PhoU domain|Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 G3DSA:1.20.58.220|PF01895|PIRSF003107|SSF109755|TIGR02135 BKD09_RS05520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR001867|IPR011006|IPR011879|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000156|GO:0000160|GO:0003677|GO:0006355|GO:0006817 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF46894|SSF52172|TIGR02154 BKD09_RS05525 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011681 GcrA cell cycle regulator PF07750 BKD09_RS05530 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004636|IPR005814|IPR015421|IPR015422|IPR015424 Acetylornithine/Succinylornithine transaminase family|Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0006525|GO:0008483|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01107|PF00202|PS00600|SSF53383|TIGR00707 BKD09_RS05535 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002292|IPR006130|IPR006131|IPR006132|IPR024904 Aspartate/ornithine carbamoyltransferase|Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain|Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding|Ornithine carbamoyltransferase|Ornithine/putrescine carbamoyltransferase GO:0004585|GO:0006520|GO:0006591|GO:0016597|GO:0016743 G3DSA:3.40.50.1370|MF_01109|PF00185|PF02729|PR00100|PR00102|SSF53671|TIGR00658 BKD09_RS05540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000397|IPR016153|IPR016154 Heat shock protein Hsp33|Heat shock protein Hsp33, C-terminal|Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 G3DSA:3.55.30.10|G3DSA:3.90.1280.10|PF01430|PIRSF005261|SSF118352|SSF64397 BKD09_RS05545 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007474|IPR023065 ApaG domain|Uncharacterised protein family ApaG G3DSA:2.60.40.1470|MF_00791|PF04379|SSF110069 BKD09_RS05550 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014550 Uncharacterised conserved protein UCP028704, OpgC PF10129|PIRSF028704 BKD09_RS05555 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013830 SGNH hydrolase-type esterase domain G3DSA:3.40.50.1110|PF13472|SSF52266 BKD09_RS05560 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013830 SGNH hydrolase-type esterase domain G3DSA:3.40.50.1110|PF13472|SSF52266 BKD09_RS05565 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000277|IPR006234|IPR015421|IPR015422|IPR015424 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme|O-succinylhomoserine sulfhydrylase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0030170|GO:0071268 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_02056|PF01053|PIRSF001434|SSF53383|TIGR01325 BKD09_RS05570 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010550|IPR029054 Deoxycytidine triphosphate deaminase, bacterial|dUTPase-like GO:0008829|GO:0009394 G3DSA:2.70.40.10|PF06559|SSF51283 BKD09_RS05575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR001610|IPR013767 PAC motif|PAS domain|PAS fold GO:0006355 G3DSA:3.30.450.20|PF00989|SM00086|SM00091|SSF55785|TIGR00229 BKD09_RS05585 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|PIRSF006603 BKD09_RS05595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019587|IPR023393 Polyketide cyclase/dehydrase|START-like domain G3DSA:3.30.530.20|PF10604|SSF55961 BKD09_RS05600 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|SSF54593 BKD09_RS05605 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR018060|IPR020449 DNA binding HTH domain, AraC-type|Homeodomain-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PR00032|SM00342|SSF46689 BKD09_RS05610 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001497|IPR008332|IPR011991|IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding|Methylated-DNA-[protein]-cysteine S-methyltransferase, active site|Methylguanine DNA methyltransferase, ribonuclease-like domain|Winged helix-turn-helix DNA-binding domain GO:0003824|GO:0003908|GO:0006281 G3DSA:1.10.10.10|G3DSA:3.30.160.70|PF01035|PS00374|SSF46767|SSF53155|TIGR00589 BKD09_RS05620 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002126|IPR010221|IPR011659|IPR015943 Cadherin|VCBS repeat|WD40-like Beta Propeller|WD40/YVTN repeat-like-containing domain GO:0005509|GO:0005515|GO:0007156|GO:0016020 G3DSA:2.130.10.10|G3DSA:2.60.40.60|PF07676|SM00112|SSF82171|TIGR01965 BKD09_RS05625 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001387|IPR010982|IPR011051|IPR014710 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0003677|GO:0043565 G3DSA:1.10.260.40|G3DSA:2.60.120.10|PF13560|SM00530|SSF47413|SSF51182 BKD09_RS05630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|PF13420|SSF55729 BKD09_RS05635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 BKD09_RS05640 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000843|IPR010982|IPR025997|IPR028082 LacI-type HTH domain|Lambda repressor-like, DNA-binding domain|Periplasmic binding protein|Periplasmic binding protein-like I GO:0003677|GO:0006355 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13407|PR00036|PS00356|SM00354|SSF47413|SSF53822 BKD09_RS05645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000577|IPR006000|IPR018483|IPR018484|IPR018485 Carbohydrate kinase, FGGY|Carbohydrate kinase, FGGY, C-terminal|Carbohydrate kinase, FGGY, N-terminal|Carbohydrate kinase, FGGY, conserved site|Xylulokinase GO:0004856|GO:0005975|GO:0005997|GO:0016773 G3DSA:3.30.420.40|PF00370|PF02782|PIRSF000538|PS00445|PS00933|SSF53067|TIGR01312 BKD09_RS05650 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001998|IPR013022|IPR013452 Xylose isomerase|Xylose isomerase, bacterial-type|Xylose isomerase-like, TIM barrel domain GO:0005975|GO:0009045 G3DSA:3.20.20.150|MF_00455|PR00688|SSF51658|TIGR02630 BKD09_RS05655 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|SM00382|SSF52540 BKD09_RS05660 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS05665 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025997|IPR028082 Periplasmic binding protein|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13407|SSF53822 BKD09_RS05670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023210 NADP-dependent oxidoreductase domain G3DSA:3.20.20.100|PF00248|SSF51430 BKD09_RS05675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006680|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase GO:0016787 G3DSA:3.20.20.140|PF04909|SSF51556 BKD09_RS05680 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009959|IPR032710 NTF2-like domain|Polyketide cyclase SnoaL-like domain G3DSA:3.10.450.50|PF12680|SSF54427 BKD09_RS05685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006175|IPR013813|IPR019897 Endoribonuclease L-PSP/chorismate mutase-like|RidA, conserved site|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|PS01094|SSF55298 BKD09_RS05690 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010126|IPR029058 Alpha/Beta hydrolase fold|Esterase, PHB depolymerase GO:0005576|GO:0016787 G3DSA:3.40.50.1820|PF10503|SSF53474 BKD09_RS05695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003953|IPR014614|IPR023753 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain|Uncharacterised conserved protein UCP036654 GO:0016491|GO:0016627|GO:0055114 G3DSA:3.50.50.60|PF00890|PIRSF036654|SSF51905 BKD09_RS05700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029045 ClpP/crotonase-like domain G3DSA:3.90.226.10|SSF52096 BKD09_RS05710 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003782|IPR012336 Copper chaperone SCO1/SenC|Thioredoxin-like fold G3DSA:3.40.30.10|PF02630|SSF52833 BKD09_RS05715 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001638 Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF00497|SM00062|SSF53850 BKD09_RS05720 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001412|IPR002904|IPR008925|IPR014729|IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding|Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2|Aminoacyl-tRNA synthetase, class I, conserved site|Lysine-tRNA ligase|Rossmann-like alpha/beta/alpha sandwich fold GO:0000049|GO:0000166|GO:0004812|GO:0004824|GO:0005524|GO:0005737|GO:0006418|GO:0006430 G3DSA:1.10.10.350|G3DSA:3.40.50.620|MF_00177|PF01921|PS00178|SSF48163|SSF52374|TIGR00467 BKD09_RS05725 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001148|IPR018338 Alpha carbonic anhydrase|Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0006730|GO:0008270 G3DSA:3.10.200.10|PF00194|PS00162|SM01057|SSF51069 BKD09_RS05730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010982|IPR015927|IPR019759|IPR028360 Lambda repressor-like, DNA-binding domain|Peptidase S24/S26, beta-ribbon domain|Peptidase S24/S26A/S26B|Peptidase S24/S26A/S26B/S26C GO:0003677 G3DSA:1.10.260.40|G3DSA:2.10.109.10|PF00717|SSF51306 BKD09_RS05735 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009297 Protein of unknown function DUF952 PF06108|SSF56399 BKD09_RS05740 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001295|IPR005719|IPR005720|IPR013785 Aldolase-type TIM barrel|Dihydroorotate dehydrogenase domain|Dihydroorotate dehydrogenase, class 2|Dihydroorotate dehydrogenase, conserved site GO:0003824|GO:0004152|GO:0005737|GO:0006207|GO:0016020|GO:0016627|GO:0055114 G3DSA:3.20.20.70|MF_00225|PF01180|PS00911|PS00912|SSF51395|TIGR01036 BKD09_RS05745 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|TIGR00797 BKD09_RS05750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF12706|SM00849|SSF56281 BKD09_RS05760 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012309|IPR012310|IPR012340|IPR016059|IPR026333 ATP-dependent DNA ligase, PP_1105 family|DNA ligase, ATP-dependent, C-terminal|DNA ligase, ATP-dependent, central|DNA ligase, ATP-dependent, conserved site|Nucleic acid-binding, OB-fold GO:0003909|GO:0003910|GO:0005524|GO:0006281|GO:0006310|GO:0051103 G3DSA:2.40.50.140|G3DSA:3.30.1490.70|G3DSA:3.30.470.30|PF01068|PF04679|PS00697|SSF50249|SSF56091|TIGR04120 BKD09_RS05765 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279|IPR026360 Metallo-beta-lactamase|Putative exonuclease, DNA ligase-associated G3DSA:3.60.15.10|PF00753|SSF56281|TIGR04122 BKD09_RS05770 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011990|IPR019734|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|G3DSA:3.40.50.150|PF13432|PF13649|SM00028|SSF48452|SSF53335 BKD09_RS05775 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS05780 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001650|IPR011545|IPR013701|IPR014001|IPR017170|IPR026362|IPR027417 DEAD/DEAH box helicase domain|DEAD/H associated|DEXH box helicase, DNA ligase-associated|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Lhr-like ATP-dependent RNA helicase, predicted|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0005524|GO:0016818 G3DSA:3.40.50.300|PF00270|PF00271|PF08494|PIRSF037307|SM00487|SM00490|SSF52540|TIGR04121 BKD09_RS05785 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004843|IPR024173|IPR026336|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like|Metallophosphoesterase, DNA ligase-associated|Phosphoesterase, MJ0037 GO:0016787 G3DSA:3.60.21.10|PF00149|PIRSF000887|SSF56300|TIGR04123 BKD09_RS05795 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021293 Protein of unknown function DUF2865 PF11064 BKD09_RS05800 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000836|IPR004467|IPR023031|IPR029057 Orotate phosphoribosyl transferase domain|Orotate phosphoribosyltransferase|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0004588|GO:0006221|GO:0009116 G3DSA:3.40.50.2020|MF_01208|PF00156|SSF53271|TIGR00336 BKD09_RS05805 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004045|IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF02798|SSF47616|SSF52833 BKD09_RS05810 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PF01810|PIRSF006324 BKD09_RS05815 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001098|IPR002298|IPR002421|IPR002562|IPR008918|IPR012337|IPR018320|IPR019760|IPR020045|IPR020046|IPR029060 3'-5' exonuclease domain|5'-3' exonuclease, C-terminal domain|5'-3' exonuclease, N-terminal|5'-3' exonuclease, alpha-helical arch, N-terminal|DNA polymerase 1|DNA polymerase A|DNA-directed DNA polymerase, family A, conserved site|DNA-directed DNA polymerase, family A, palm domain|Helix-hairpin-helix motif, class 2|PIN domain-like|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0003824|GO:0003887|GO:0006139|GO:0006260|GO:0006261|GO:0008408 G3DSA:1.10.150.20|G3DSA:1.20.1060.10|G3DSA:3.30.420.10|G3DSA:3.30.70.370|G3DSA:3.40.50.1010|PF00476|PF01367|PF01612|PF02739|PR00868|PS00447|SM00279|SM00474|SM00475|SM00482|SSF47807|SSF53098|SSF56672|SSF88723|TIGR00593 BKD09_RS05820 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002656 Acyltransferase 3 GO:0016747 PF01757 BKD09_RS05825 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001732|IPR008927|IPR014026|IPR014027|IPR016040|IPR017476|IPR028357 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|UDP-glucose 6-dehydrogenase, bacterial type|UDP-glucose/GDP-mannose dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase, C-terminal|UDP-glucose/GDP-mannose dehydrogenase, N-terminal|UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0000271|GO:0003979|GO:0016616|GO:0051287|GO:0055114 G3DSA:1.20.5.100|G3DSA:3.40.50.720|PF00984|PF03720|PF03721|PIRSF000124|PIRSF500134|SM00984|SSF48179|SSF51735|SSF52413|TIGR03026 BKD09_RS05830 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001650|IPR007502|IPR010225|IPR013689|IPR014001|IPR027417 ATP-dependent RNA helicase HrpB, C-terminal|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase-associated domain|P-loop containing nucleoside triphosphate hydrolase|RNA helicase, ATP-dependent DEAH box, HrpB-type GO:0004386 G3DSA:3.40.50.300|PF00271|PF04408|PF08482|PIRSF005496|SM00487|SM00490|SM00847|SSF52540|TIGR01970 BKD09_RS05835 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011969|IPR021109 Aspartic peptidase domain|Clan AA aspartic peptidase, C-terminal PF13975|SSF50630|TIGR02281 BKD09_RS05840 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005841|IPR005843|IPR005844|IPR005845|IPR005846|IPR016055 Alpha-D-phosphohexomutase superfamily|Alpha-D-phosphohexomutase, C-terminal|Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III|Alpha-D-phosphohexomutase, alpha/beta/alpha domain I|Alpha-D-phosphohexomutase, alpha/beta/alpha domain II|Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868|GO:0071704 G3DSA:3.30.310.50|G3DSA:3.40.120.10|PF00408|PF02878|PF02879|PF02880|PR00509|SSF53738|SSF55957 BKD09_RS05845 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000485|IPR011008|IPR011991|IPR019885|IPR019887|IPR019888 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Transcription regulator HTH, AsnC-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13404|PR00033|PS00519|SM00344|SSF46785|SSF54909 BKD09_RS05850 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002173|IPR011611|IPR029056 Carbohydrate kinase PfkB|Carbohydrate/puine kinase, PfkB, conserved site|Ribokinase-like GO:0016773 G3DSA:3.40.1190.20|PF00294|PS00584|SSF53613 BKD09_RS05855 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000086|IPR015375|IPR015376|IPR015797|IPR020084 NADH pyrophosphatase-like, N-terminal|NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site|Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 G3DSA:3.90.79.10|PF00293|PF09296|PF09297|PS00893|SSF55811 BKD09_RS05860 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001310|IPR011146|IPR026026 HIT-like domain|Histidine triad (HIT) protein|Histidine triad hydrolase, Hint-type GO:0003824 G3DSA:3.30.428.10|PF01230|PIRSF000714|SSF54197 BKD09_RS05865 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013341|IPR013342|IPR018110|IPR029017|IPR029065 Enolase C-terminal domain-like|Enolase N-terminal domain-like|Mandelate racemase/muconate lactonizing enzyme, C-terminal|Mandelate racemase/muconate lactonizing enzyme, N-terminal domain|Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 G3DSA:3.20.20.120|G3DSA:3.30.390.10|PF02746|PF13378|PS00909|SM00922|SSF51604|SSF54826 BKD09_RS05870 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00081|SM00822|SSF51735 BKD09_RS05875 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030679 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-type amino acid transport system, ATPase component, HisP-type|P-loop containing nucleoside triphosphate hydrolase GO:0003333|GO:0005524|GO:0015424|GO:0016887 G3DSA:3.40.50.300|PF00005|PIRSF039085|PS00211|SM00382|SSF52540 BKD09_RS05880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 BKD09_RS05885 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001638 Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF00497|SM00062|SSF53850 BKD09_RS05890 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010582|IPR011614|IPR018028|IPR020835|IPR024708|IPR024711 Catalase active site|Catalase core domain|Catalase immune-responsive domain|Catalase, mono-functional, haem-containing|Catalase, mono-functional, haem-containing, clades 1 and 3|Catalase-like domain GO:0004096|GO:0006979|GO:0020037|GO:0055114 G3DSA:2.40.180.10|PF00199|PF06628|PIRSF038928|PR00067|PS00438|SM01060|SSF56634 BKD09_RS05895 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003607|IPR006674 HD domain|HD/PDEase domain G3DSA:1.10.3210.10|PF01966|SM00471|SSF109604 BKD09_RS05900 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002818|IPR009057|IPR018060|IPR029062 Class I glutamine amidotransferase-like|DJ-1/PfpI|DNA binding HTH domain, AraC-type|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:3.40.50.880|PF01965|PF12833|SM00342|SSF46689|SSF52317 BKD09_RS05910 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003593|IPR008921|IPR012763|IPR022107|IPR022754|IPR027417 AAA+ ATPase domain|DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|DNA polymerase III, gamma subunit, domain III|DNA polymerase III, subunit gamma/ tau|DNA polymerase III, subunit gamma/ tau, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003887|GO:0005524|GO:0006260|GO:0009360 G3DSA:1.10.8.60|G3DSA:1.20.272.10|G3DSA:3.40.50.300|PF12169|PF12362|PF13177|SM00382|SSF48019|SSF52540|TIGR02397 BKD09_RS05915 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004401 Nucleoid-associated protein YbaB/EbfC family G3DSA:3.30.1310.10|MF_00274|PF02575|PIRSF004555|SSF82607|TIGR00103 BKD09_RS05920 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000093|IPR006171|IPR015967|IPR023627|IPR023628 DNA recombination protein RecR|Recombination protein RecR|Recombination protein RecR, C4-type zinc finger|Recombination protein RecR, conserved site|Toprim domain GO:0003677|GO:0006281|GO:0006310 MF_00017|PF02132|PF13662|PS01300|SSF111304|TIGR00615 BKD09_RS05930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS05935 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003798 DNA recombination RmuC PF02646 BKD09_RS05940 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023635 Peptide deformylase G3DSA:3.90.45.10|MF_00163|PF01327|PIRSF004749|PR01576|SSF56420|TIGR00079 BKD09_RS05945 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001555|IPR002376|IPR005793|IPR005794|IPR011034 Formyl transferase, C-terminal|Formyl transferase, C-terminal-like|Formyl transferase, N-terminal|Methionyl-tRNA formyltransferase|Phosphoribosylglycinamide formyltransferase, active site GO:0003824|GO:0004479|GO:0009058|GO:0016742|GO:0071951 G3DSA:3.10.25.10|G3DSA:3.40.50.170|MF_00182|PF00551|PF02911|PS00373|SSF50486|SSF53328|TIGR00460 BKD09_RS05950 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001406|IPR020094|IPR020095|IPR020097|IPR020103 Pseudouridine synthase I, TruA|Pseudouridine synthase I, TruA, C-terminal|Pseudouridine synthase I, TruA, N-terminal|Pseudouridine synthase I, TruA, alpha/beta domain|Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.30.70.580|G3DSA:3.30.70.660|MF_00171|PF01416|PIRSF001430|SSF55120|TIGR00071 BKD09_RS05955 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002933|IPR005941|IPR011650 Peptidase M20|Peptidase M20, dimerisation domain|Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0008152|GO:0009014|GO:0009089|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|MF_01690|PF01546|PF07687|SSF53187|SSF55031|TIGR01246 BKD09_RS05960 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008523 Protein of unknown function DUF805 GO:0016021 PF05656 BKD09_RS05965 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001451|IPR005664|IPR011004|IPR023180 Hexapeptide repeat|Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family|Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1|Trimeric LpxA-like GO:0008666|GO:0009089 G3DSA:1.10.166.10|G3DSA:2.160.10.10|MF_00811|PF00132|PF14602|PF14805|SSF51161|TIGR00965 BKD09_RS05970 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006439|IPR010237|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain|Pyrimidine 5-nucleotidase GO:0008152|GO:0016787 G3DSA:3.40.50.1000|PF13419|SSF56784|TIGR01509|TIGR01993 BKD09_RS05975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002477|IPR009380 Peptidoglycan binding-like|Protein of unknown function DUF1036 G3DSA:1.10.101.10|PF01471|PF06282|SSF47090 BKD09_RS05980 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001048|IPR004662 Acetylglutamate kinase|Aspartate/glutamate/uridylate kinase GO:0003991|GO:0005737|GO:0006526 G3DSA:3.40.1160.10|MF_00082_A|MF_00082_B|PF00696|PIRSF000728|SSF53633|TIGR00761 BKD09_RS05985 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006696 Protein of unknown function DUF423 PF04241 BKD09_RS05990 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006073|IPR019987|IPR027417 GTP binding domain|GTP-binding protein, ribosome biogenesis, YsxC|P-loop containing nucleoside triphosphate hydrolase GO:0005525 G3DSA:3.40.50.300|MF_00321|PF01926|SSF52540|TIGR03598 BKD09_RS05995 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001708|IPR019998|IPR028053|IPR028055 Membrane insertase OXA1/ALB3/YidC|Membrane insertase YidC|Membrane insertase YidC, N-terminal|Membrane insertase YidC/Oxa1, C-terminal GO:0016021|GO:0051205 MF_01810|PF02096|PF14849|PR00701|PR01900|TIGR03592|TIGR03593 BKD09_RS06000 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000100|IPR014721|IPR020539|IPR020568 Ribonuclease P|Ribonuclease P, conserved site|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0000049|GO:0004526|GO:0008033 G3DSA:3.30.230.10|MF_00227|PD003629|PF00825|PS00648|SSF54211|TIGR00188 BKD09_RS06010 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003594|IPR004358 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 G3DSA:3.30.565.10|PF02518|PR00344|SM00387|SSF55874 BKD09_RS06020 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|PR00111|SSF53474 BKD09_RS06030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000644 CBS domain G3DSA:3.10.580.10|PF00571|SM00116|SSF54631 BKD09_RS06035 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 G3DSA:3.90.960.10|PF04073|SSF55826 BKD09_RS06045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007780|IPR016040|IPR028971 NAD(P)-binding domain|NAD-glutamate dehydrogenase|NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 G3DSA:3.40.50.720|PF05088|PIRSF036761|SSF51735|SSF53223 BKD09_RS06050 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 PF02706 BKD09_RS06060 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011008 Dimeric alpha-beta barrel SSF54909 BKD09_RS06065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000192|IPR015421|IPR015422|IPR015424 Aminotransferase class V domain|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|SSF53383 BKD09_RS06075 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011251 Luciferase-like domain GO:0016705|GO:0055114 G3DSA:3.20.20.30|PF00296|SSF51679 BKD09_RS06080 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS06085 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PR00420|SSF51905 BKD09_RS06090 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002563|IPR012349 FMN-binding split barrel|Flavin reductase like domain GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF01613|SM00903|SSF50475 BKD09_RS06095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR018060|IPR018062|IPR032687 DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|HTH-type transcriptional regulator AraC-type, N-terminal|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12625|PF12833|PS00041|SM00342|SSF46689 BKD09_RS06105 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009962 Protein of unknown function DUF1488 PF07369|SSF160272 BKD09_RS06110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010297|IPR014586|IPR029058 Alpha/Beta hydrolase fold|Protein of unknown function DUF900, hydrolase-like|Uncharacterised conserved protein UCP033909 G3DSA:3.40.50.1820|PF05990|PIRSF033909|SSF53474 BKD09_RS06115 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13649|SSF53335 BKD09_RS06120 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000944|IPR011991 Transcription regulator Rrf2-type|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF02082|SSF46785 BKD09_RS06125 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006638|IPR007197|IPR013704|IPR020612|IPR022946|IPR023404|IPR024560 Elongator protein 3/MiaB/NifB|Methylthiotransferase, conserved site|Radical SAM|Radical SAM, alpha/beta horseshoe|Uncharacterised protein family UPF0313|Uncharacterised protein family UPF0313, C-terminal|Uncharacterised protein family UPF0313, N-terminal GO:0003824|GO:0051536|GO:0051539 G3DSA:3.80.30.20|MF_01251|PF04055|PF08497|PF11842|PS01278|SM00729|SSF102114|TIGR03904 BKD09_RS06130 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 BKD09_RS06135 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|SM00345|SM00895|SSF46785|SSF48008 BKD09_RS06140 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004113|IPR006094|IPR016164|IPR016166|IPR016167|IPR016169|IPR016171 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|FAD-linked oxidase, C-terminal|FAD-linked oxidase-like, C-terminal|Vanillyl-alcohol oxidase, C-terminal subdomain 2 GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:1.10.45.10|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF01565|PF02913|SSF55103|SSF56176 BKD09_RS06145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002220|IPR013785|IPR020624 Aldolase-type TIM barrel|DapA-like|Schiff base-forming aldolase, conserved site GO:0003824|GO:0008152|GO:0016829 G3DSA:3.20.20.70|PF00701|PIRSF001365|PR00146|PS00665|SM01130|SSF51569 BKD09_RS06150 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000531|IPR010105|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|SSF56935|TIGR01783 BKD09_RS06155 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR026045 Ferric binding protein G3DSA:3.40.190.10|PF13531|PIRSF002825|SSF53850 BKD09_RS06160 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005625 PepSY-associated TM protein G3DSA:1.20.950.20|PF03929 BKD09_RS06165 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001763 Rhodanese-like domain G3DSA:3.40.250.10|PF00581|SM00450|SSF52821 BKD09_RS06170 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006139|IPR006140|IPR016040|IPR029752|IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.30.70.260|G3DSA:3.40.50.720|PF00389|PF02826|PS00065|PS00670|PS00671|SSF51735|SSF52283|SSF55021 BKD09_RS06175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002641|IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase|Patatin/Phospholipase A2-related GO:0006629|GO:0008152 G3DSA:3.40.1090.10|PF01734|SSF52151 BKD09_RS06180 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 PF02447 BKD09_RS06185 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011118|IPR029058 Alpha/Beta hydrolase fold|Tannase/feruloyl esterase G3DSA:3.40.50.1820|PF07519|SSF53474 BKD09_RS06190 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004638|IPR011701|IPR020846 Drug resistance transporter EmrB/QacA subfamily|Major facilitator superfamily|Major facilitator superfamily domain GO:0006810|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473|TIGR00711 BKD09_RS06195 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003997|IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain|RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 G3DSA:2.40.50.100|PF16576|PR01490|SSF111369 BKD09_RS06200 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|SSF46689|SSF48498 BKD09_RS06205 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12802|SM00347|SSF46785 BKD09_RS06210 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001753|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|SSF52096 BKD09_RS06215 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003660|IPR004089|IPR004090 Chemotaxis methyl-accepting receptor|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PR00260|SM00283|SM00304|SSF158472|SSF58104 BKD09_RS06220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002220|IPR013785 Aldolase-type TIM barrel|DapA-like GO:0003824|GO:0008152|GO:0016829 G3DSA:3.20.20.70|PF00701|PIRSF001365|SM01130|SSF51569 BKD09_RS06225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008826|IPR015943 Selenium-binding protein|WD40/YVTN repeat-like-containing domain GO:0005515|GO:0008430 G3DSA:2.130.10.10|PF05694|SSF75011 BKD09_RS06235 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009389 Protein of unknown function DUF1045 PF06299|PIRSF033328|TIGR03223 BKD09_RS06240 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006680|IPR011059|IPR012696|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain|Phosphonate metabolism PhnM GO:0016787|GO:0016810|GO:0019700 G3DSA:2.30.40.10|PF01979|PIRSF038971|SSF51338|SSF51556 BKD09_RS06245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001451|IPR011004|IPR017694 Hexapeptide repeat|Phosphonate metabolim protein, transferase hexapeptide repeat family|Trimeric LpxA-like G3DSA:2.160.10.10|PF00132|SSF51161|TIGR03308 BKD09_RS06250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR012693|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter, phosphonate import, PhnC|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015416|GO:0015716|GO:0016020|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540|TIGR02315 BKD09_RS06255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005770|IPR017797 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein|Phosphonate ABC transporter, periplasmic substrate-binding protein GO:0015604|GO:0015716|GO:0043190|GO:0055085 G3DSA:3.40.190.10|PF12974|SSF53850|TIGR01098|TIGR03431 BKD09_RS06260 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR005769 ABC transporter type 1, transmembrane domain MetI-like|ABC transporter, permease PhnE/PtxC GO:0005887|GO:0006810|GO:0015604|GO:0015716|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01097 BKD09_RS06265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR005769 ABC transporter type 1, transmembrane domain MetI-like|ABC transporter, permease PhnE/PtxC GO:0005887|GO:0006810|GO:0015604|GO:0015716|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01097 BKD09_RS06270 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR011663|IPR011991|IPR012702|IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain|Phosphonate C-P lyase system, transcriptional regulator PhnF|Transcription regulator HTH, GntR|UbiC transcription regulator-associated|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.1410.10|PF00392|PF07702|PR00035|SM00345|SM00866|SSF46785|SSF64288|TIGR02325 BKD09_RS06275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 PF06754|TIGR03293 BKD09_RS06280 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 PF05845|PIRSF020680|SSF159709|TIGR03292 BKD09_RS06285 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008773 Phosphonate metabolism protein PhnI GO:0019634 PF05861|PIRSF007313 BKD09_RS06290 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 PF06007|PIRSF011468 BKD09_RS06295 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR012700|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase|Phosphonate C-P lyase system, PhnK GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PIRSF037116|PS00211|SM00382|SSF52540|TIGR02323 BKD09_RS06300 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR012701|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase|Phosphonate C-P lyase system, PhnL GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540|TIGR02324 BKD09_RS06305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006680|IPR011059|IPR012696|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain|Phosphonate metabolism PhnM GO:0016787|GO:0016810|GO:0019700 G3DSA:2.30.40.10|PF01979|PIRSF038971|SSF51338|SSF51556|TIGR02318 BKD09_RS06310 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008145|IPR012699|IPR027417 Guanylate kinase/L-type calcium channel beta subunit|P-loop containing nucleoside triphosphate hydrolase|Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 G3DSA:3.40.50.300|MF_00836|PF13238|SM00072|SSF52540|TIGR02322 BKD09_RS06315 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011576|IPR012349|IPR024029 FMN-binding split barrel|Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain|Pyridoxamine 5-phosphate oxidase, FMN-dependent GO:0004733|GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF01243|SSF50475|TIGR04025 BKD09_RS06320 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|SSF51735 BKD09_RS06330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001638|IPR010067|IPR015168 Aliphatic sulfonates-binding protein|Solute-binding protein family 3/N-terminal domain of MltF|SsuA/THI5-like GO:0006790|GO:0006810|GO:0016020 G3DSA:3.40.190.10|PF09084|SM00062|SSF53850|TIGR01728 BKD09_RS06335 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR000639|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Epoxide hydrolase-like GO:0003824 G3DSA:3.40.50.1820|PF12697|PR00111|PR00412|SSF53474 BKD09_RS06340 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000277|IPR006235|IPR015421|IPR015422|IPR015424 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme|O-acetylhomoserine/O-acetylserine sulfhydrylase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0006520|GO:0016765|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01053|PIRSF001434|PS00868|SSF53383|TIGR01326 BKD09_RS06345 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|SM00346|SSF46785|SSF55781 BKD09_RS06350 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 BKD09_RS06355 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002563|IPR012349 FMN-binding split barrel|Flavin reductase like domain GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF01613|SM00903|SSF50475 BKD09_RS06360 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 G3DSA:3.90.850.10|PF01557|SSF56529 BKD09_RS06365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011234|IPR012690 2-oxo-hepta-3-ene-1,7-dioic acid hydratase|Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152|GO:0019439 G3DSA:3.90.850.10|SSF56529|TIGR02312 BKD09_RS06370 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006175|IPR013813 Endoribonuclease L-PSP/chorismate mutase-like|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|SSF55298 BKD09_RS06375 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006680|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase GO:0016787 G3DSA:3.20.20.140|PF04909|SSF51556 BKD09_RS06380 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011251|IPR019949 Luciferase family oxidoreductase, group 1|Luciferase-like domain GO:0016705|GO:0055114 G3DSA:3.20.20.30|PF00296|SSF51679|TIGR03558 BKD09_RS06395 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021436 Protein of unknown function DUF3085 PF11284 BKD09_RS06400 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001902|IPR002645|IPR011547 SLC26A/SulP transporter|SLC26A/SulP transporter domain|STAS domain GO:0008271|GO:0008272|GO:0015116|GO:0016020|GO:0016021|GO:0055085 G3DSA:3.30.750.24|PF00916|PF01740|SSF52091|TIGR00815 BKD09_RS06405 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 G3DSA:2.60.130.10|SSF49482 BKD09_RS06410 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013130 Ferric reductase transmembrane component-like domain PF01794 BKD09_RS06415 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000595|IPR014710|IPR018490 Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF00027|PR00103|SM00100|SSF51206 BKD09_RS06420 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009009 RlpA-like protein, double-psi beta-barrel domain PF03330 BKD09_RS06425 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|SSF56925 BKD09_RS06440 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000103|IPR000595|IPR014710|IPR018490|IPR023753 Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, class-II|RmlC-like jelly roll fold GO:0016491|GO:0055114 G3DSA:2.60.120.10|G3DSA:3.50.50.60|PF00027|PF07992|PR00368|PR00469|SM00100|SSF51206|SSF51905 BKD09_RS06445 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009799|IPR011008 Dimeric alpha-beta barrel|EthD domain G3DSA:3.30.70.900|PF07110|SSF54909|TIGR02118 BKD09_RS06455 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF00561|PR00111|SSF53474 BKD09_RS06460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR015893|IPR023772 DNA-binding HTH domain, TetR-type|DNA-binding HTH domain, TetR-type, conserved site|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PR00455|PS01081|SSF46689 BKD09_RS06465 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|SSF51735 BKD09_RS06470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016040 NAD(P)-binding domain G3DSA:3.40.50.720|PF13460|SSF51735 BKD09_RS06475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021335 Protein of unknown function DUF2948 PF11164 BKD09_RS06480 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001692|IPR012131|IPR016161|IPR022695 Aldehyde/histidinol dehydrogenase|Histidinol dehydrogenase|Histidinol dehydrogenase, conserved site|Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008152|GO:0008270|GO:0016491|GO:0051287|GO:0055114 G3DSA:3.40.50.1980|MF_01024|PF00815|PIRSF000099|PR00083|PS00611|SSF53720|TIGR00069 BKD09_RS06485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008321 Uncharacterised conserved protein UCP032146 MF_00678|PF06793|PIRSF032146 BKD09_RS06490 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023485 Phosphotyrosine protein phosphatase I superfamily G3DSA:3.40.50.270|PF01451|SM00226|SSF52788 BKD09_RS06495 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003697|IPR029001 Inosine triphosphate pyrophosphatase-like|Maf-like protein GO:0005737 G3DSA:3.90.950.10|MF_00528|PF02545|PIRSF006305|SSF52972|TIGR00172 BKD09_RS06500 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005584|IPR013088 DNA gyrase inhibitor YacG|Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 G3DSA:3.30.50.10|MF_00649|PF03884|SSF57716 BKD09_RS06520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027379 Cardiolipin synthase N-terminal PF13396 BKD09_RS06525 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021937 Protein of unknown function DUF3551 PF12071 BKD09_RS06530 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR001789|IPR003594|IPR003661|IPR004358|IPR011006|IPR013656 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PF08448|PR00344|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55785|SSF55874 BKD09_RS06535 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011038|IPR014602|IPR014878 Calycin-like|Domain of unknown function DUF1794|Uncharacterised conserved protein UCP036226 PF08768|PIRSF036226|SSF50814 BKD09_RS06540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002734|IPR024072 Bacterial bifunctional deaminase-reductase, C-terminal|Dihydrofolate reductase-like domain GO:0008703|GO:0009231|GO:0055114 G3DSA:3.40.430.10|PF01872|SSF53597 BKD09_RS06545 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002937|IPR023753 Amine oxidase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|G3DSA:3.90.660.10|PF01593|PR00420|SSF51905|SSF54373 BKD09_RS06555 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|PF00857|SSF52499 BKD09_RS06560 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021439 Protein of unknown function DUF3088 PF11287 BKD09_RS06575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023210 NADP-dependent oxidoreductase domain G3DSA:3.20.20.100|PF00248|SSF51430 BKD09_RS06580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006683|IPR029069 HotDog domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|SSF54637 BKD09_RS06585 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000086|IPR015797|IPR020084|IPR020476 NUDIX hydrolase|NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site GO:0016787 G3DSA:3.90.79.10|PF00293|PR00502|PS00893|SSF55811 BKD09_RS06605 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011852 TRAP transporter solute receptor, TAXI family G3DSA:3.40.190.10|PF16868|SSF53850|TIGR02122 BKD09_RS06610 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010656|IPR011853 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter, 4TM/12TM fusion protein PF06808|TIGR02123 BKD09_RS06615 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015001 Protein of unknown function DUF1850 PF08905 BKD09_RS06620 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SSF51735 BKD09_RS06630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PF00999 BKD09_RS06635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011990|IPR013105|IPR019734 Tetratricopeptide repeat|Tetratricopeptide repeat 2|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF07719|SM00028|SSF48452 BKD09_RS06640 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001440|IPR009739|IPR011990|IPR019734 Protein of unknown function DUF1311|Tetratricopeptide repeat|Tetratricopeptide repeat 1|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF00515|PF07007|PF13181|PF13414|SM00028|SSF48452 BKD09_RS06645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR020845|IPR025110|IPR032387 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase|Acetyl-coenzyme A synthetase, N-terminal domain GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PF16177|PS00455|SSF56801 BKD09_RS06655 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005618|IPR011250 Outer membrane protein, OmpW|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021|GO:0019867 G3DSA:2.40.160.20|PF03922|SSF56925 BKD09_RS06660 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010421 Protein of unknown function DUF1013 PF06242 BKD09_RS06665 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 MF_00191|PF02401|TIGR00216 BKD09_RS06670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002575|IPR005280|IPR011009 Aminoglycoside phosphotransferase|Homoserine kinase ThrB|Protein kinase-like domain GO:0004413|GO:0009088 G3DSA:3.30.200.20|G3DSA:3.90.1200.10|MF_00301|PF01636|SSF56112|TIGR00938 BKD09_RS06675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002156|IPR012337|IPR022892 Ribonuclease H|Ribonuclease H domain|Ribonuclease H-like domain GO:0003676|GO:0004523 G3DSA:3.30.420.10|MF_00042|PF00075|SSF53098 BKD09_RS06680 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012336|IPR013740 Redoxin|Thioredoxin-like fold GO:0016491 G3DSA:3.40.30.10|PF08534|SSF52833 BKD09_RS06685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010323|IPR011990 Protein of unknown function DUF924|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.20.58.320|G3DSA:1.25.40.10|PF06041|SSF48452 BKD09_RS06690 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801 BKD09_RS06695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001967|IPR012338|IPR018044 Beta-lactamase/transpeptidase-like|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 G3DSA:3.40.710.10|PF00768|PR00725|SSF56601 BKD09_RS06700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR005896|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|Glucan exporter ATP-binding protein, NdvA|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0005886|GO:0006810|GO:0015441|GO:0015775|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|SM00382|SSF52540|SSF90123|TIGR01192 BKD09_RS06705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015168 SsuA/THI5-like G3DSA:3.40.190.10|PF09084|SSF53850 BKD09_RS06715 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008179|IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase|Phosphoribosyl-ATP pyrophosphohydrolase-like GO:0000105|GO:0004636 MF_01020|PF01503|SSF101386|TIGR03188 BKD09_RS06730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000362|IPR008948|IPR018951|IPR020557|IPR022761|IPR024083 Fumarase C, C-terminal|Fumarase/histidase, N-terminal|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0006099|GO:0016829 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|PF00206|PF10415|PR00145|PR00149|PS00163|SSF48557 BKD09_RS06735 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004136|IPR013785 Aldolase-type TIM barrel|Nitronate monooxygenase GO:0003824|GO:0018580|GO:0055114 G3DSA:3.20.20.70|PF03060|SSF51412 BKD09_RS06740 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029069 HotDog domain G3DSA:3.10.129.10|PF13622|SSF54637 BKD09_RS06745 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801 BKD09_RS06750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004136|IPR013785 Aldolase-type TIM barrel|Nitronate monooxygenase GO:0003824|GO:0018580|GO:0055114 G3DSA:3.20.20.70|PF03060|SSF51412 BKD09_RS06780 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011047|IPR027295 Quinoprotein alcohol dehydrogenase-like domain|Quinoprotein alcohol dehydrogenase-like superfamily G3DSA:2.140.10.10|SSF50998 BKD09_RS06795 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003594|IPR011712 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 G3DSA:3.30.565.10|PF02518|PF07730|SM00387|SSF55874 BKD09_RS06800 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PS00622|SM00421|SM00448|SSF46894|SSF52172 BKD09_RS06805 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018712 Domain of unknown function DUF2235 PF09994 BKD09_RS06820 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR018060|IPR018062|IPR020449 DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PR00032|PS00041|SM00342|SSF46689 BKD09_RS06845 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003752|IPR023380|IPR024199 Disulphide bond formation protein DsbB-like domain|Disulphide bond formation protein DsbB/BdbC|Uncharacterised conserved protein, DsbB-like GO:0015035|GO:0016020 G3DSA:1.20.1550.10|PF02600|PIRSF033913|SSF158442 BKD09_RS06850 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007820|IPR017516 AbrB duplication|AbrB family GO:0010468|GO:0016021 PF05145|PIRSF038991|TIGR03082 BKD09_RS06855 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011690 Phosphate-starvation-induced PsiF repeat PF07769 BKD09_RS06865 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|SSF46689 BKD09_RS06870 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029069 HotDog domain G3DSA:3.10.129.10|PF13279|SSF54637 BKD09_RS06875 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003736|IPR006683|IPR029069 HotDog domain|Phenylacetic acid degradation-related domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|SSF54637|TIGR00369 BKD09_RS06880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012336 Thioredoxin-like fold G3DSA:3.40.30.10|PF13462|SSF52833 BKD09_RS06890 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003140|IPR029058 Alpha/Beta hydrolase fold|Phospholipase/carboxylesterase/thioesterase GO:0016787 G3DSA:3.40.50.1820|PF02230|SSF53474 BKD09_RS06895 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001478|IPR001940|IPR009003 PDZ domain|Peptidase S1, PA clan|Peptidase S1C GO:0004252|GO:0005515|GO:0006508 G3DSA:2.30.42.10|G3DSA:2.40.10.10|PF13180|PF13365|PR00834|SM00228|SSF50156|SSF50494 BKD09_RS06900 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002933|IPR011650|IPR017145|IPR017439 Amidohydrolase|Aminobenzoyl-glutamate utilization protein B|Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PIRSF037227|SSF53187|SSF55031|TIGR01891 BKD09_RS06905 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|SSF53850 BKD09_RS06910 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS06915 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR025966 ABC transporter type 1, transmembrane domain MetI-like|Oligopeptide transport permease C-like, N-terminal domain GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PF12911|SSF161098 BKD09_RS06920 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540|TIGR01727 BKD09_RS06925 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540|TIGR01727 BKD09_RS06930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006439|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain GO:0008152|GO:0016787 G3DSA:3.40.50.1000|PF13419|PR00413|SSF56784|TIGR01509 BKD09_RS06935 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003313|IPR009057|IPR018060 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:2.60.120.280|PF12833|PF14525|SM00342|SSF46689|SSF51215 BKD09_RS06940 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR000160|IPR001610|IPR013655|IPR029787|IPR033479 Double Cache domain 1|GGDEF domain|Nucleotide cyclase|PAC motif|PAS domain|PAS fold-3 GO:0005515 G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00990|PF02743|PF08447|SM00086|SM00091|SM00267|SSF55073|SSF55785|TIGR00229|TIGR00254 BKD09_RS06945 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009923|IPR025543 Dodecin|Dodecin-like G3DSA:3.30.1660.10|PF07311|SSF89807 BKD09_RS06950 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 BKD09_RS06955 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018584 Glycosyltransferase family 87 GO:0016758 PF09594 BKD09_RS06960 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000757|IPR013320 Concanavalin A-like lectin/glucanase domain|Glycoside hydrolase family 16 GO:0004553|GO:0005975 G3DSA:2.60.120.200|PF00722|SSF49899 BKD09_RS06965 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001360|IPR013781|IPR017736|IPR017853|IPR033132 Glycoside hydrolase family 1|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 1, beta-glucosidase|Glycosyl hydrolases family 1, N-terminal conserved site GO:0004553|GO:0005975|GO:0008422|GO:0030245 G3DSA:3.20.20.80|PF00232|PR00131|PS00653|SSF51445|TIGR03356 BKD09_RS06970 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|SSF51905 BKD09_RS06975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003615|IPR029471 HNH endonuclease 5|HNH nuclease PF14279|SM00507 BKD09_RS06980 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001258|IPR011042 NHL repeat|Six-bladed beta-propeller, TolB-like GO:0005515 G3DSA:2.120.10.30|PF01436|SSF63829 BKD09_RS06985 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF13738|PR00411|SSF51905 BKD09_RS06990 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011032|IPR021276 GroES-like|Protein of unknown function DUF2855 G3DSA:3.90.180.10|PF11017|SSF50129 BKD09_RS06995 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801 BKD09_RS07000 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS07005 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004136|IPR013785 Aldolase-type TIM barrel|Nitronate monooxygenase GO:0003824|GO:0018580|GO:0055114 G3DSA:3.20.20.70|PF03060|SSF51412 BKD09_RS07010 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS07015 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003265|IPR011257|IPR023170 DNA glycosylase|Helix-turn-helix, base-excision DNA repair, C-terminal|HhH-GPD domain GO:0003824|GO:0006281|GO:0006284 G3DSA:1.10.1670.10|G3DSA:1.10.340.30|PF00730|SM00478|SSF48150 BKD09_RS07020 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000924|IPR001412|IPR014729|IPR020058 Aminoacyl-tRNA synthetase, class I, conserved site|Glutamyl/glutaminyl-tRNA synthetase|Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain|Rossmann-like alpha/beta/alpha sandwich fold GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418|GO:0016876|GO:0043039 G3DSA:3.40.50.620|G3DSA:3.90.800.10|PF00749|PR00987|PS00178|SSF52374 BKD09_RS07025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR003594|IPR003661|IPR004358|IPR011006 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PR00344|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55874 BKD09_RS07030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR017039 Virulence factor BrkB PF03631|PIRSF035875 BKD09_RS07035 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007667 Hypoxia induced protein, domain PF04588 BKD09_RS07040 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016030|IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type|Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like G3DSA:1.20.1200.10|PD007457|PF01923|SSF89028|TIGR00636 BKD09_RS07045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000049|IPR012255|IPR014729|IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal|Electron transfer flavoprotein, beta subunit|Electron transfer flavoprotein, beta-subunit, conserved site|Rossmann-like alpha/beta/alpha sandwich fold GO:0009055 G3DSA:3.40.50.620|PF01012|PIRSF000090|PS01065|SM00893|SSF52402 BKD09_RS07050 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001308|IPR014729|IPR014730|IPR014731|IPR018206|IPR029035 DHS-like NAD/FAD-binding domain|Electron transfer flavoprotein alpha subunit/FixB|Electron transfer flavoprotein subunit alpha, conserved site|Electron transfer flavoprotein, alpha subunit, C-terminal|Electron transfer flavoprotein, alpha/beta-subunit, N-terminal|Rossmann-like alpha/beta/alpha sandwich fold GO:0009055|GO:0050660 G3DSA:3.40.50.1220|G3DSA:3.40.50.620|PF00766|PF01012|PIRSF000089|PS00696|SM00893|SSF52402|SSF52467 BKD09_RS07055 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006108|IPR006176|IPR006180|IPR008927|IPR013328|IPR016040|IPR022694 3-hydroxyacyl-CoA dehydrogenase|3-hydroxyacyl-CoA dehydrogenase, C-terminal|3-hydroxyacyl-CoA dehydrogenase, NAD binding|3-hydroxyacyl-CoA dehydrogenase, conserved site|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0003857|GO:0006631|GO:0016491|GO:0055114|GO:0070403 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF00725|PF02737|PIRSF000105|PS00067|SSF48179|SSF51735 BKD09_RS07065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012336|IPR013740|IPR017937 Redoxin|Thioredoxin, conserved site|Thioredoxin-like fold GO:0016491|GO:0045454 G3DSA:3.40.30.10|PF08534|PS00194|SSF52833 BKD09_RS07070 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000362|IPR008948|IPR009049|IPR020557|IPR022761|IPR024083|IPR029419 Argininosuccinate lyase|Argininosuccinate lyase, C-terminal|Fumarase/histidase, N-terminal|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0004056|GO:0042450 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|MF_00006|PF00206|PF14698|PR00145|PR00149|PS00163|SSF48557|TIGR00838 BKD09_RS07075 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032831 Prokaryotic lipoprotein-attachment site PF13627 BKD09_RS07080 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000183|IPR002986|IPR009006|IPR022643|IPR022644|IPR022653|IPR029066 Alanine racemase/group IV decarboxylase, C-terminal|Diaminopimelate decarboxylase, LysA|Orn/DAP/Arg decarboxylase 2, C-terminal|Orn/DAP/Arg decarboxylase 2, N-terminal|Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site|Ornithine/DAP/Arg decarboxylase|PLP-binding barrel GO:0003824|GO:0008836|GO:0009089 G3DSA:2.40.37.10|G3DSA:3.20.20.10|MF_02120|PF00278|PF02784|PR01179|PR01181|PS00878|SSF50621|SSF51419|TIGR01048 BKD09_RS07085 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002204|IPR006115|IPR008927|IPR013328|IPR015815|IPR016040|IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain|3-hydroxyisobutyrate dehydrogenase-related|3-hydroxyisobutyrate dehydrogenase-related, conserved site|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, NADP-binding|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0004616|GO:0016491|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF03446|PF14833|PIRSF000103|PS00895|SSF48179|SSF51735 BKD09_RS07090 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003779|IPR029032 AhpD-like|Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 G3DSA:1.20.1290.10|PF02627|SSF69118 BKD09_RS07095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012683 Conserved hypothetical protein CHP02302, transmembrane PF13779|TIGR02302 BKD09_RS07100 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012683 Conserved hypothetical protein CHP02302, transmembrane PF13779 BKD09_RS07105 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 BKD09_RS07110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011723 Zinc finger/thioredoxin putative PF13717|TIGR02098 BKD09_RS07115 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR005286|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Cell division protein FtsE, ATP-binding|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887|GO:0051301 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540|TIGR02673 BKD09_RS07125 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003848|IPR014729 Domain of unknown function DUF218|Rossmann-like alpha/beta/alpha sandwich fold G3DSA:3.40.50.620|PD207074|PF02698 BKD09_RS07130 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 G3DSA:3.40.1130.10|PF01553|SM00563|SSF69593 BKD09_RS07135 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006840|IPR013024 Butirosin biosynthesis, BtrG-like|ChaC-like protein G3DSA:3.10.490.10|PF04752|SSF110857 BKD09_RS07140 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018666 Protein of unknown function DUF2125 PF09898 BKD09_RS07145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003099|IPR008927|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 G3DSA:1.10.3660.10|G3DSA:3.40.50.720|PF02153|SSF48179|SSF51735 BKD09_RS07150 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004839|IPR005861|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Histidinol-phosphate aminotransferase family|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0000105|GO:0003824|GO:0004400|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01023|PF00155|SSF53383 BKD09_RS07155 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002701|IPR020822 Chorismate mutase|Chorismate mutase, type II GO:0046417 G3DSA:1.20.59.10|PF01817|SM00830|SSF48600 BKD09_RS07160 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR008220|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 G3DSA:3.40.50.1820|MF_00296|PF00561|PIRSF000443|SSF53474|TIGR01392 BKD09_RS07165 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010743|IPR029063 Methionine biosynthesis MetW|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF07021|SSF53335|TIGR02081 BKD09_RS07170 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF00561|SSF53474 BKD09_RS07175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000064|IPR007921|IPR013423 CHAP domain|Conserved hypothetical protein CHP02594|Endopeptidase, NLPC/P60 domain G3DSA:3.90.1720.10|PF05257|SSF54001|TIGR02594 BKD09_RS07180 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005302|IPR005303|IPR011037|IPR015808 MOSC, N-terminal beta barrel|Molybdenum cofactor sulfurase, C-terminal|Molybdenum cofactor sulfurase, C-terminal-like|Pyruvate kinase-like, insert domain GO:0003824|GO:0030151|GO:0030170 G3DSA:2.40.33.20|PF03473|PF03476|SSF50800 BKD09_RS07185 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001270|IPR003593|IPR003959|IPR004176|IPR017730|IPR018368|IPR019489|IPR027417|IPR028299 AAA+ ATPase domain|ATPase, AAA-type, core|Chaperonin ClpB|Clp ATPase, C-terminal|Clp, N-terminal|ClpA/B family|ClpA/B, conserved site 1|ClpA/B, conserved site 2|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0005737|GO:0009408|GO:0016485|GO:0019538 G3DSA:1.10.1780.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00004|PF02861|PF07724|PF10431|PR00300|PS00870|PS00871|SM00382|SM01086|SSF52540|SSF81923|TIGR03346 BKD09_RS07190 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.30.420.150 BKD09_RS07195 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011042 Six-bladed beta-propeller, TolB-like G3DSA:2.120.10.30|SSF101898 BKD09_RS07200 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011055|IPR016047 Duplicated hybrid motif|Peptidase M23 G3DSA:2.70.70.10|PF01551|SSF51261 BKD09_RS07240 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018389|IPR026289 Solute binding protein, mannitol/chloroaromatic system-like|TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PF03480|PIRSF039026 BKD09_RS07245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018389|IPR026289 Solute binding protein, mannitol/chloroaromatic system-like|TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PF03480|PIRSF039026 BKD09_RS07265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000683|IPR013974|IPR016040 NAD(P)-binding domain|Oxidoreductase, N-terminal|SAF domain GO:0016491 G3DSA:3.40.50.720|PF01408|PF08666|SM00858|SSF51735 BKD09_RS07270 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008775 Phytanoyl-CoA dioxygenase G3DSA:2.60.120.620|PF05721|SSF51197 BKD09_RS07275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|SM00345|SM00895|SSF46785|SSF48008 BKD09_RS07280 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001261|IPR002933|IPR011650|IPR017150 ArgE/DapE/ACY1/CPG2/YscS, conserved site|Peptidase M20|Peptidase M20, dimerisation domain|Peptidase M20, glutamate carboxypeptidase GO:0006508|GO:0008152|GO:0008237|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PIRSF037238|PS00758|PS00759|SSF53187|SSF55031 BKD09_RS07285 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284|IPR032710 NTF2-like domain|RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|G3DSA:3.10.450.50|PF04542|PF08281|SSF54427|SSF88659|SSF88946|TIGR02937 BKD09_RS07290 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003779|IPR004675|IPR029032 AhpD-like|Alkylhydroperoxidase AhpD core|Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 G3DSA:1.20.1290.10|PF02627|SSF69118|TIGR00778 BKD09_RS07295 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|SSF53474 BKD09_RS07300 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|SSF53474 BKD09_RS07305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001497|IPR008332|IPR011991|IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding|Methylated-DNA-[protein]-cysteine S-methyltransferase, active site|Methylguanine DNA methyltransferase, ribonuclease-like domain|Winged helix-turn-helix DNA-binding domain GO:0003824|GO:0003908|GO:0006281 G3DSA:1.10.10.10|G3DSA:3.30.160.70|PF01035|PS00374|SSF46767|SSF53155|TIGR00589 BKD09_RS07310 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801 BKD09_RS07315 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002155|IPR016039|IPR020613|IPR020616|IPR020617 Thiolase|Thiolase, C-terminal|Thiolase, N-terminal|Thiolase, conserved site|Thiolase-like GO:0003824|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00108|PF02803|PIRSF000429|PS00737|SSF53901|TIGR01930 BKD09_RS07320 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PF14514|PR00455|SSF46689|SSF48498 BKD09_RS07325 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|SSF51735 BKD09_RS07330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001753|IPR018376|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily|Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|PS00166|SSF52096 BKD09_RS07335 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR020845 AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.40.50.980|PF00501|PS00455|SSF56801 BKD09_RS07340 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02771|SSF47203|SSF56645 BKD09_RS07345 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|SSF47203|SSF56645 BKD09_RS07350 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|SSF47203|SSF56645 BKD09_RS07355 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000415|IPR029479 Nitroreductase|Nitroreductase-like GO:0016491 G3DSA:3.40.109.10|PF00881|SSF55469 BKD09_RS07360 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000838|IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, ECF, conserved site|RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PS01063|SSF88659|SSF88946|TIGR02937 BKD09_RS07370 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006|IPR014605 CheY-like superfamily|Signal transduction response regulator PhyR-like, alphaproteobacteria|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PIRSF036400|SM00448|SSF52172 BKD09_RS07375 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006260 TonB, C-terminal GO:0006810 G3DSA:3.30.1150.10|PF03544|PF13103|SSF74653|TIGR01352 BKD09_RS07380 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009959|IPR032710 NTF2-like domain|Polyketide cyclase SnoaL-like domain G3DSA:3.10.450.50|PF13577|SSF54427 BKD09_RS07385 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002104|IPR011010|IPR013762|IPR023109|IPR025166 DNA breaking-rejoining enzyme, catalytic core|Domain of unknown function DUF4102|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PF13356|SSF56349 BKD09_RS07395 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 BKD09_RS07400 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012309|IPR012310|IPR012340|IPR014146 DNA ligase D, ligase domain|DNA ligase, ATP-dependent, C-terminal|DNA ligase, ATP-dependent, central|Nucleic acid-binding, OB-fold GO:0003910|GO:0005524|GO:0006281|GO:0006310 G3DSA:2.40.50.140|G3DSA:3.30.1490.70|G3DSA:3.30.470.30|PF01068|PF04679|SSF50249|SSF56091|TIGR02779 BKD09_RS07410 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003738 SOS response associated peptidase (SRAP) G3DSA:3.90.1680.10|PF02586|SSF143081 BKD09_RS07425 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006118|IPR006119|IPR006120|IPR009057 Homeodomain-like|Recombinase, conserved site|Resolvase, HTH domain|Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 G3DSA:1.10.10.60|G3DSA:3.40.50.1390|PF00239|PF02796|PS00397|PS00398|SM00857|SSF46689|SSF53041 BKD09_RS07450 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010093 SinI-like, DNA-binding domain GO:0003677 PF12728|TIGR01764 BKD09_RS07470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001404|IPR003594|IPR020568|IPR020575 Heat shock protein Hsp90 family|Heat shock protein Hsp90, N-terminal|Histidine kinase-like ATPase, C-terminal domain|Ribosomal protein S5 domain 2-type fold GO:0005524|GO:0006457|GO:0006950|GO:0051082 G3DSA:3.30.565.10|MF_00505|PF00183|PF13589|PIRSF002583|PR00775|SM00387|SSF110942|SSF54211|SSF55874 BKD09_RS07475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021937 Protein of unknown function DUF3551 PF12071 BKD09_RS07480 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021937 Protein of unknown function DUF3551 PF12071 BKD09_RS07485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013830 SGNH hydrolase-type esterase domain G3DSA:3.40.50.1110|PF13472|SSF52266 BKD09_RS07490 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR020845 AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PS00455|SSF56801 BKD09_RS07495 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009081 Phosphopantetheine binding ACP domain G3DSA:1.10.1200.10|PF00550|SSF47336 BKD09_RS07500 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801 BKD09_RS07505 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|SM00822|SSF51735 BKD09_RS07520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021445 Protein of unknown function DUF3095 PF11294 BKD09_RS07525 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019223 Domain of unknown function DUF2147 PF09917 BKD09_RS07535 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|PF13527|SSF55729 BKD09_RS07540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001189|IPR019831|IPR019832|IPR019833 Manganese/iron superoxide dismutase|Manganese/iron superoxide dismutase, C-terminal|Manganese/iron superoxide dismutase, N-terminal|Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 G3DSA:1.10.287.990|PF00081|PF02777|PIRSF000349|PR01703|PS00088|SSF46609|SSF54719 BKD09_RS07545 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005524 Predicted permease DUF318 PF03773 BKD09_RS07560 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS07565 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001626|IPR029022 ABC transporter, BtuC-like|ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 PF00950|SSF81345 BKD09_RS07570 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006127|IPR006128|IPR006129 Adhesin B|Adhesion lipoprotein|Periplasmic solute binding protein, ZnuA-like GO:0007155|GO:0030001|GO:0046872 G3DSA:3.40.50.1980|PF01297|PR00690|PR00691|SSF53807 BKD09_RS07575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003495|IPR011629|IPR027417 CobW/HypB/UreG, nucleotide-binding domain|Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.30.1220.10|G3DSA:3.40.50.300|PF02492|PF07683|SM00833|SSF52540|SSF90002 BKD09_RS07580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001680|IPR011047|IPR015943|IPR024977 Anaphase-promoting complex subunit 4, WD40 domain|Quinoprotein alcohol dehydrogenase-like superfamily|WD40 repeat|WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.130.10.10|PF12894|SM00320|SSF50998 BKD09_RS07585 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PF02308|PR01837 BKD09_RS07595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010451|IPR023375|IPR023653 Acetoacetate decarboxylase|Acetoacetate decarboxylase beta barrel domain|Acetoacetate decarboxylase, bacterial GO:0016829|GO:0016831 G3DSA:2.40.400.10|MF_00597|PF06314|SSF160104 BKD09_RS07600 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005097|IPR016040|IPR023181|IPR032095 Homospermidine synthase-like, domain|NAD(P)-binding domain|Saccharopine dehydrogenase, C-terminal|Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 G3DSA:3.30.360.30|G3DSA:3.40.50.720|PF03435|PF16653 BKD09_RS07605 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006175|IPR013813 Endoribonuclease L-PSP/chorismate mutase-like|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|SSF55298 BKD09_RS07610 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 BKD09_RS07615 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000183|IPR002433|IPR009006|IPR022643|IPR022644|IPR022653|IPR029066 Alanine racemase/group IV decarboxylase, C-terminal|Orn/DAP/Arg decarboxylase 2, C-terminal|Orn/DAP/Arg decarboxylase 2, N-terminal|Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site|Ornithine decarboxylase|Ornithine/DAP/Arg decarboxylase|PLP-binding barrel GO:0003824|GO:0006596 G3DSA:2.40.37.10|G3DSA:3.20.20.10|PF00278|PF02784|PR01179|PR01182|PS00878|SSF50621|SSF51419 BKD09_RS07625 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001567|IPR024077|IPR024079|IPR024080 Metallopeptidase, catalytic domain|Neurolysin/Thimet oligopeptidase, N-terminal|Neurolysin/Thimet oligopeptidase, domain 2|Peptidase M3A/M3B GO:0004222|GO:0006508|GO:0008237 G3DSA:1.10.1370.10|G3DSA:1.20.1050.40|G3DSA:3.40.390.10|PF01432|SSF55486 BKD09_RS07630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010412|IPR016537 Protein of unknown function DUF1007|Uncharacterised conserved protein UCP008159, PF06226|PIRSF008159 BKD09_RS07635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 PF03824 BKD09_RS07640 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002559|IPR008490 Transposase InsH, N-terminal|Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PF01609|PF05598 BKD09_RS07645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001129|IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain|Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein G3DSA:1.20.120.550|PF01124|SSF161084 BKD09_RS07650 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001015|IPR019772 Ferrochelatase|Ferrochelatase, active site GO:0004325|GO:0006783 G3DSA:3.40.50.1400|MF_00323|PF00762|PS00534|SSF53800|TIGR00109 BKD09_RS07655 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007487 ABC transporter, substrate-binding protein G3DSA:3.40.50.2300|PF04392 BKD09_RS07665 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001107|IPR001972|IPR032435 Band 7 domain|Band 7, C-terminal extension|Stomatin family GO:0016020 PF01145|PF16200|PR00721|SM00244|SSF117892 BKD09_RS07670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002810|IPR012340 NfeD-like, C-terminal domain|Nucleic acid-binding, OB-fold G3DSA:2.40.50.140|PF01957 BKD09_RS07675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002559|IPR008490 Transposase InsH, N-terminal|Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PF01609|PF05598 BKD09_RS07680 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002577|IPR011991 Helix-turn-helix, HxlR type|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF01638|SSF46785 BKD09_RS07685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003779|IPR029032 AhpD-like|Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 G3DSA:1.20.1290.10|PF02627|SSF69118 BKD09_RS07690 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000644|IPR001347|IPR004800 CBS domain|Phosphosugar isomerase, KdsD/KpsF-type|Sugar isomerase (SIS) GO:0005975|GO:0016853|GO:0030246 G3DSA:3.10.580.10|G3DSA:3.40.50.10490|PF00571|PF01380|PIRSF004692|SM00116|SSF53697|TIGR00393 BKD09_RS07695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018759 Putative beta-barrel porin 2 PF10082 BKD09_RS07700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006005|IPR009051|IPR016040|IPR023753|IPR028261 Alpha-helical ferredoxin|Dihydroprymidine dehydrogenase domain II|FAD/NAD(P)-binding domain|Glutamate synthase, NADH/NADPH, small subunit 1|NAD(P)-binding domain GO:0006537|GO:0016491|GO:0016639|GO:0051536|GO:0055114 G3DSA:1.10.1060.10|G3DSA:3.40.50.720|G3DSA:3.50.50.60|PF07992|PF14691|PR00419|SSF46548|SSF51971|TIGR01317 BKD09_RS07705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002489|IPR002932|IPR006982|IPR013785|IPR017932|IPR029055 Aldolase-type TIM barrel|Glutamate synthase domain|Glutamate synthase, alpha subunit, C-terminal|Glutamate synthase, central-N|Glutamine amidotransferase type 2 domain|Nucleophile aminohydrolases, N-terminal GO:0003824|GO:0006537|GO:0006807|GO:0008152|GO:0015930|GO:0016491|GO:0016638|GO:0055114 G3DSA:2.160.20.60|G3DSA:3.20.20.70|G3DSA:3.60.20.10|PF00310|PF01493|PF01645|PF04898|SSF51395|SSF56235|SSF69336 BKD09_RS07715 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|SSF53474 BKD09_RS07720 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002068|IPR008978 Alpha crystallin/Hsp20 domain|HSP20-like chaperone G3DSA:2.60.40.790|PF00011|SSF49764 BKD09_RS07725 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR022742|IPR029058 Alpha/Beta hydrolase fold|Serine aminopeptidase, S33 G3DSA:3.40.50.1820|PF12146|SSF53474 BKD09_RS07730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|SSF46626 BKD09_RS07735 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR011990|IPR019734|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|Nucleotide cyclase|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515|GO:0009190|GO:0016849|GO:0035556 G3DSA:1.25.40.10|G3DSA:3.30.70.1230|PF00211|SM00028|SSF48452|SSF55073 BKD09_RS07740 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PF01810|PIRSF006324 BKD09_RS07745 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006913|IPR011057 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V|Mss4-like GO:0008152|GO:0016846 G3DSA:3.90.1590.10|PF04828|SSF51316 BKD09_RS07750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925 BKD09_RS07755 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 BKD09_RS07760 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 BKD09_RS07765 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000760|IPR011809 Histidinol-phosphate phosphatase, putative, inositol monophosphatase|Inositol monophosphatase GO:0004401|GO:0046854 G3DSA:3.30.540.10|G3DSA:3.40.190.80|PF00459|PR00377|SSF56655|TIGR02067 BKD09_RS07770 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002508|IPR007709 N-acetylmuramoyl-L-alanine amidase, catalytic domain|N-formylglutamate amidohydrolase GO:0008745|GO:0009253 G3DSA:3.40.630.40|PF05013|SSF53187 BKD09_RS07775 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 BKD09_RS07785 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032710 NTF2-like domain G3DSA:3.10.450.50|SSF54427 BKD09_RS07795 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR026002 L-2-amino-thiazoline-4-carboxylic acid hydrolase PF14196 BKD09_RS07805 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028116 Putative oxalocrotonate tautomerase G3DSA:3.30.429.10|PF14832 BKD09_RS07820 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013813 Endoribonuclease L-PSP/chorismate mutase-like G3DSA:3.30.1330.40|PF14588|SSF55298 BKD09_RS07825 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013341|IPR013342|IPR018110|IPR029017|IPR029065 Enolase C-terminal domain-like|Enolase N-terminal domain-like|Mandelate racemase/muconate lactonizing enzyme, C-terminal|Mandelate racemase/muconate lactonizing enzyme, N-terminal domain|Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 G3DSA:3.20.20.120|G3DSA:3.30.390.10|PF02746|PF13378|PS00908|PS00909|SM00922|SSF51604|SSF54826 BKD09_RS07830 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR021796|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|Nucleotide cyclase|Protein of unknown function DUF3365 GO:0009190|GO:0016849|GO:0035556 G3DSA:3.30.70.1230|PF00211|PF11845|SM00044|SSF55073 BKD09_RS07835 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS07840 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR018060|IPR020449|IPR032687 DNA binding HTH domain, AraC-type|HTH-type transcriptional regulator AraC-type, N-terminal|Homeodomain-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12625|PF12833|PR00032|SM00342|SSF46689 BKD09_RS07845 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021409 Protein of unknown function DUF3047 PF11249 BKD09_RS07850 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002018|IPR029058 Alpha/Beta hydrolase fold|Carboxylesterase, type B G3DSA:3.40.50.1820|PF00135|SSF53474 BKD09_RS07860 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001613|IPR002937|IPR023753 Amine oxidase|FAD/NAD(P)-binding domain|Flavin amine oxidase GO:0016491|GO:0055114 G3DSA:1.10.405.10|G3DSA:3.50.50.60|G3DSA:3.90.660.10|PF01593|PR00757|SSF51905 BKD09_RS07865 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like G3DSA:2.60.120.590|PF13532|SSF51197 BKD09_RS07870 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003594|IPR003660|IPR003661|IPR004358 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PR00344|SM00387|SM00388|SSF47384|SSF55874 BKD09_RS07875 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF46894|SSF52172 BKD09_RS07880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025231 Domain of unknown function DUF4173 PF13777 BKD09_RS07885 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001764|IPR017853 Glycoside hydrolase superfamily|Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 G3DSA:3.20.20.300|PF00933|SSF51445 BKD09_RS07890 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|SSF53850 BKD09_RS07895 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS07900 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000866|IPR012336 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF00578|SSF52833 BKD09_RS07905 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006680|IPR011059|IPR011778|IPR032466 Amidohydrolase-related|Hydantoinase/dihydropyrimidinase|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0005737|GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|SSF51338|SSF51556|TIGR02033 BKD09_RS07910 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893|IPR025996 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal|WHG domain GO:0003677 G3DSA:1.10.357.10|PF00440|PF13305|SSF46689|SSF48498 BKD09_RS07915 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007157 PspA/IM30 PF04012 BKD09_RS07920 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008024 YiaAB two helix PF05360 BKD09_RS07925 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006680|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase GO:0016787 G3DSA:3.20.20.140|PF04909|SSF51556 BKD09_RS07930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006680|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase GO:0016787 G3DSA:3.20.20.140|PF04909|SSF51556 BKD09_RS07935 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 G3DSA:2.102.10.10|PF00355|SSF50022 BKD09_RS07945 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|SSF51735 BKD09_RS07950 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015590|IPR016160|IPR016161|IPR016162|IPR016163|IPR029510 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|PS00687|SSF53720 BKD09_RS07955 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001155|IPR013785 Aldolase-type TIM barrel|NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0003824|GO:0010181|GO:0016491|GO:0055114 G3DSA:3.20.20.70|PF00724|SSF51395 BKD09_RS07960 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006913|IPR011057 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V|Mss4-like GO:0008152|GO:0016846 G3DSA:3.90.1590.10|PF04828|SSF51316 BKD09_RS07965 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007076 TfoX, N-terminal G3DSA:3.30.1460.30|PF04993|SSF159894 BKD09_RS07970 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000399|IPR011766|IPR012000|IPR012001|IPR029035|IPR029061 DHS-like NAD/FAD-binding domain|TPP-binding enzyme, conserved site|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0030976 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|PS00187|SSF52467|SSF52518 BKD09_RS07975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011251|IPR016215 Luciferase-like domain|Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497|GO:0016705|GO:0055114 G3DSA:3.20.20.30|PF00296|PIRSF000337|SSF51679|TIGR03860 BKD09_RS07980 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002933|IPR011650 Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|SSF53187 BKD09_RS07985 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001638 Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF00497|SM00062|SSF53850 BKD09_RS07990 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 BKD09_RS07995 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 BKD09_RS08000 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030679 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-type amino acid transport system, ATPase component, HisP-type|P-loop containing nucleoside triphosphate hydrolase GO:0003333|GO:0005524|GO:0015424|GO:0016887 G3DSA:3.40.50.300|PF00005|PIRSF039085|PS00211|SM00382|SSF52540 BKD09_RS08005 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 G3DSA:3.20.10.10|G3DSA:3.30.470.10|PF01063|SSF56752 BKD09_RS08010 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003779|IPR004675|IPR029032 AhpD-like|Alkylhydroperoxidase AhpD core|Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 G3DSA:1.20.1290.10|PF02627|SSF69118|TIGR00778 BKD09_RS08015 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004638|IPR011701|IPR020846 Drug resistance transporter EmrB/QacA subfamily|Major facilitator superfamily|Major facilitator superfamily domain GO:0006810|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473|TIGR00711 BKD09_RS08020 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain G3DSA:2.40.50.100|PF16576|SSF111369 BKD09_RS08025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 BKD09_RS08030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR020556|IPR023631 Amidase signature domain|Amidase, conserved site G3DSA:3.90.1300.10|PF01425|PS00571|SSF75304 BKD09_RS08035 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002869|IPR009014|IPR019752|IPR029061 Pyruvate-flavodoxin oxidoreductase, central domain|Pyruvate/ketoisovalerate oxidoreductase, catalytic domain|Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152|GO:0016491|GO:0016903|GO:0055114 G3DSA:3.40.50.970|G3DSA:3.40.920.10|PF01558|SSF52518|SSF52922|SSF53323 BKD09_RS08040 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000485|IPR011008|IPR011991|IPR019885|IPR019887|IPR019888 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Transcription regulator HTH, AsnC-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13412|PR00033|PS00519|SM00344|SSF46785|SSF54909 BKD09_RS08045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011234|IPR018833 Domain of unknown function DUF2437|Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 G3DSA:3.90.850.10|PF01557|PF10370|SSF56529 BKD09_RS08050 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011251|IPR016215 Luciferase-like domain|Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497|GO:0016705|GO:0055114 G3DSA:3.20.20.30|PF00296|PIRSF000337|SSF51679|TIGR03860 BKD09_RS08055 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 G3DSA:1.10.1530.10|G3DSA:3.30.1370.60|PF02615|SSF89733 BKD09_RS08060 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000160|IPR001633|IPR003018|IPR029016|IPR029787 EAL domain|GAF domain|GAF domain-like|GGDEF domain|Nucleotide cyclase GO:0005515 G3DSA:3.20.20.450|G3DSA:3.30.450.40|G3DSA:3.30.70.270|PF00563|PF00990|PF13185|SM00052|SM00065|SM00267|SSF141868|SSF55073|SSF55781|TIGR00254 BKD09_RS08070 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001509|IPR005886|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain|UDP-glucose 4-epimerase GalE GO:0003824|GO:0003978|GO:0006012|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|SSF51735|TIGR01179 BKD09_RS08075 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 PF03808|TIGR00696 BKD09_RS08080 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002586|IPR003856|IPR027417 CobQ/CobB/MinD/ParA nucleotide binding domain|Lipopolysaccharide biosynthesis|P-loop containing nucleoside triphosphate hydrolase GO:0009103|GO:0016020 G3DSA:3.40.50.300|PF01656|PF02706|SSF52540 BKD09_RS08085 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13489|SSF53335 BKD09_RS08090 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029044 Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF13641|SSF53448 BKD09_RS08095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|SSF53448 BKD09_RS08100 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic SSF53756 BKD09_RS08105 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007016 O-antigen ligase-related PF04932 BKD09_RS08110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016181 Acyl-CoA N-acyltransferase PF13480|SSF55729 BKD09_RS08115 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010662|IPR029058 Alpha/Beta hydrolase fold|Putative hydrolase RBBP9/YdeN GO:0016787 G3DSA:3.40.50.1820|PF06821|SSF53474 BKD09_RS08120 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000485|IPR011008|IPR011991|IPR019885|IPR019887|IPR019888 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Transcription regulator HTH, AsnC-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13412|PR00033|PS00519|SM00344|SSF46785|SSF54909 BKD09_RS08125 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF01135|SSF53335 BKD09_RS08130 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005025|IPR010089|IPR029039 Flavoprotein WrbA|Flavoprotein-like domain|NADPH-dependent FMN reductase-like GO:0010181|GO:0016491|GO:0045892 G3DSA:3.40.50.360|MF_01017|PF03358|SSF52218|TIGR01755 BKD09_RS08135 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003829|IPR011051|IPR012093|IPR014710 Pirin|Pirin, N-terminal domain|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF02678|PIRSF006232|SSF51182 BKD09_RS08140 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00080|PR00081|SSF51735 BKD09_RS08145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS08150 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 G3DSA:3.30.70.1290|PF01797|SM01321|SSF143422 BKD09_RS08160 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 BKD09_RS08170 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|Nucleotide cyclase GO:0009190|GO:0016849|GO:0035556 G3DSA:3.30.70.1230|PF00211|SSF55073 BKD09_RS08175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 G3DSA:3.90.960.10|PF04073|SSF55826 BKD09_RS08180 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006328|IPR006439|IPR023198|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain|Haloacid dehalogenase, type II|Phosphoglycolate phosphatase, domain 2 GO:0008152|GO:0016787|GO:0019120 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF00702|PR00413|SSF56784|TIGR01428|TIGR01493|TIGR01509 BKD09_RS08185 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001189|IPR019831|IPR019832 Manganese/iron superoxide dismutase|Manganese/iron superoxide dismutase, C-terminal|Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 PF02777|PIRSF000349|SSF46609|SSF54719 BKD09_RS08195 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005624 Haem-degrading PF03928|SSF143744 BKD09_RS08200 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006680|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase GO:0016787 G3DSA:3.20.20.140|PF04909|SSF51556 BKD09_RS08205 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00251|PF00444|PS00828|SSF57840 BKD09_RS08210 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13181|PF13432|SM00028|SSF48452 BKD09_RS08220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:1.10.8.60 BKD09_RS08225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR000639|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Epoxide hydrolase-like GO:0003824 G3DSA:3.40.50.1820|PF12697|PR00111|PR00412|SSF53474 BKD09_RS08230 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002327|IPR009056 Cytochrome c, class IA/ IB|Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF00034|PR00604|SSF46626 BKD09_RS08235 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004113|IPR006094|IPR016164|IPR016166|IPR016167|IPR016169|IPR016171 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|FAD-linked oxidase, C-terminal|FAD-linked oxidase-like, C-terminal|Vanillyl-alcohol oxidase, C-terminal subdomain 2 GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:1.10.45.10|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF01565|PF02913|SSF55103|SSF56176 BKD09_RS08240 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002656 Acyltransferase 3 GO:0016747 PF01757 BKD09_RS08245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007138|IPR011008 Antibiotic biosynthesis monooxygenase domain|Dimeric alpha-beta barrel G3DSA:3.30.70.900|PF03992|SSF54909 BKD09_RS08250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006094|IPR016164|IPR016166|IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-linked oxidase-like, C-terminal GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.30.465.10|PF01565|SSF55103|SSF56176 BKD09_RS08255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004017|IPR012257|IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Cysteine-rich domain|Glycolate oxidase, iron-sulphur subunit G3DSA:1.10.1060.10|PF02754|PF12838|PIRSF000139|PS00198|SSF52402|SSF54862 BKD09_RS08265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010239 Conserved hypothetical protein CHP02001 PF09694|TIGR02001 BKD09_RS08270 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF06472|PS00211|SM00382|SSF52540|SSF90123 BKD09_RS08275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 PF02652|TIGR00795 BKD09_RS08280 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005184 Domain of unknown function DUF306, Meta/HslJ PF03724 BKD09_RS08290 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001844|IPR002423|IPR018370|IPR027409|IPR027413 Chaperonin Cpn60|Chaperonin Cpn60, conserved site|Chaperonin Cpn60/TCP-1 family|GroEL-like apical domain|GroEL-like equatorial domain GO:0005524|GO:0005737|GO:0006457|GO:0042026 G3DSA:1.10.560.10|G3DSA:3.50.7.10|MF_00600|PF00118|PR00298|PS00296|SSF48592|SSF52029|SSF54849|TIGR02348 BKD09_RS08295 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011032|IPR018369|IPR020818 Chaperonin GroES, conserved site|GroES chaperonin family|GroES-like GO:0005524|GO:0005737|GO:0006457 G3DSA:2.30.33.40|MF_00580|PF00166|PR00297|PS00681|SM00883|SSF50129 BKD09_RS08305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 G3DSA:1.10.287.500|PF04344|SSF75708 BKD09_RS08310 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005490 L,D-transpeptidase catalytic domain GO:0016740 G3DSA:2.40.440.10|PF03734|SSF141523 BKD09_RS08315 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018648 Protein of unknown function DUF2076 PF09849 BKD09_RS08320 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002509|IPR006879|IPR011330 Chitooligosaccharide deacetylase ChbG-like|Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF04794|SSF88713 BKD09_RS08325 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|SSF53448 BKD09_RS08330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013820|IPR018198|IPR020621 ATP phosphoribosyltransferase HisG, long form|ATP phosphoribosyltransferase, catalytic domain|ATP phosphoribosyltransferase, conserved site GO:0000105|GO:0003879|GO:0005737 G3DSA:3.40.190.10|MF_00079|PF01634|PS01316|SSF53850|TIGR00070 BKD09_RS08335 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 G3DSA:3.30.930.10|PF13393|PIRSF001549|SSF55681 BKD09_RS08350 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR018060 DNA binding HTH domain, AraC-type|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|SM00342 BKD09_RS08355 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006700|IPR015947|IPR029026|IPR029028 Alpha/beta knot methyltransferases|PUA-like domain|Ribosomal RNA small subunit methyltransferase E|tRNA (guanine-N1-)-methyltransferase, N-terminal GO:0006364|GO:0008168 G3DSA:3.40.1280.10|PF04452|PIRSF015601|SSF75217|SSF88697|TIGR00046 BKD09_RS08365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000537|IPR006370|IPR030470|IPR031103 4-hydroxybenzoate octaprenyltransferase|4-hydroxybenzoate polyprenyltransferase|UbiA prenyltransferase conserved site|UbiA prenyltransferase family GO:0004659|GO:0006744|GO:0016021 MF_01635|PF01040|PS00943|TIGR01474 BKD09_RS08375 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 PF01523|SSF111283 BKD09_RS08380 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000760 Inositol monophosphatase GO:0046854 G3DSA:3.30.540.10|G3DSA:3.40.190.80|PF00459|PR00377|SSF56655 BKD09_RS08385 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025226 Protein of unknown function DUF4170 PF13773 BKD09_RS08390 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007172 Domain of unknown function DUF374 PD032436|PF04028 BKD09_RS08395 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal PF04413|SSF53756 BKD09_RS08400 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003758|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 MF_00409|PF02606|SSF52540|TIGR00682 BKD09_RS08405 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014845 Uncharacterised protein GYD PF08734 BKD09_RS08420 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018661 Protein of unknown function DUF2093 PF09866 BKD09_RS08425 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002925|IPR029058 Alpha/Beta hydrolase fold|Dienelactone hydrolase GO:0016787 G3DSA:3.40.50.1820|PF01738|SSF53474 BKD09_RS08430 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003753|IPR020579|IPR025824 Exonuclease VII, large subunit|Exonuclease VII, large subunit, C-terminal|OB-fold nucleic acid binding domain GO:0003676|GO:0006308|GO:0008855|GO:0009318 MF_00378|PF02601|PF13742|TIGR00237 BKD09_RS08435 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR022742|IPR029058 Alpha/Beta hydrolase fold|Serine aminopeptidase, S33 G3DSA:3.40.50.1820|PF12146|SSF53474 BKD09_RS08445 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011991|IPR027395 Winged helix DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF13601|SSF46785 BKD09_RS08450 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000115|IPR011054|IPR013815|IPR013816|IPR016185|IPR020559|IPR020560|IPR020561|IPR020562 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Phosphoribosylglycinamide synthetase|Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain|Phosphoribosylglycinamide synthetase, C-domain|Phosphoribosylglycinamide synthetase, N-terminal|Phosphoribosylglycinamide synthetase, conserved site|Pre-ATP-grasp domain|Rudiment single hybrid motif GO:0003824|GO:0004637|GO:0005524|GO:0009113 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|G3DSA:3.90.600.10|MF_00138|PF01071|PF02843|PF02844|PS00184|SM01209|SM01210|SSF51246|SSF52440|SSF56059|TIGR00877 BKD09_RS08455 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR000639|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Epoxide hydrolase-like GO:0003824 G3DSA:3.40.50.1820|PF00561|PR00111|PR00412|SSF53474 BKD09_RS08460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016192|IPR016193|IPR028883 APOBEC/CMP deaminase, zinc-binding|Cytidine deaminase-like|tRNA-specific adenosine deaminase GO:0002100|GO:0003824|GO:0008251|GO:0008270|GO:0016787 G3DSA:3.40.140.10|MF_00972|PF14437|PS00903|SSF53927 BKD09_RS08465 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000748|IPR002942|IPR006145|IPR018496|IPR020103 Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, RsuA/RluB/E/F|Pseudouridine synthase, RsuA/RluB/E/F, conserved site|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain GO:0001522|GO:0003723|GO:0009451|GO:0009982|GO:0016866 G3DSA:3.10.290.10|PF00849|PF01479|PS01149|SM00363|SSF55120|SSF55174|TIGR00093 BKD09_RS08470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002052|IPR004398|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|RNA methyltransferase, RsmD|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0008168|GO:0031167|GO:0032259 G3DSA:3.40.50.150|PF03602|PIRSF004553|PS00092|SSF53335|TIGR00095 BKD09_RS08475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002099|IPR003594|IPR013507|IPR014721|IPR014762|IPR014790|IPR020568|IPR020667 DNA mismatch repair protein family|DNA mismatch repair protein, C-terminal|DNA mismatch repair protein, MutL|DNA mismatch repair, conserved site|Histidine kinase-like ATPase, C-terminal domain|MutL, C-terminal, dimerisation|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0005524|GO:0006298|GO:0030983 G3DSA:3.30.230.10|G3DSA:3.30.565.10|MF_00149|PF01119|PF08676|PF13589|PS00058|SM00853|SM01340|SSF118116|SSF54211|SSF55874|TIGR00585 BKD09_RS08480 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027373 Ribbon-helix-helix domain PF13467 BKD09_RS08485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000172|IPR007867|IPR023753 FAD/NAD(P)-binding domain|Glucose-methanol-choline oxidoreductase, C-terminal|Glucose-methanol-choline oxidoreductase, N-terminal GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.50.50.60|PF00732|PF05199|SSF51905|SSF54373 BKD09_RS08495 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|SSF54593 BKD09_RS08500 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002327|IPR009056 Cytochrome c, class IA/ IB|Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF00034|PR00604|SSF46626 BKD09_RS08510 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 G3DSA:3.30.160.200|PF00472|SSF75620 BKD09_RS08515 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007863|IPR011237|IPR011249|IPR011765 Metalloenzyme, LuxS/M16 peptidase-like|Peptidase M16 domain|Peptidase M16, C-terminal|Peptidase M16, N-terminal GO:0003824|GO:0046872 G3DSA:3.30.830.10|PF00675|PF05193|SSF63411 BKD09_RS08520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001431|IPR007863|IPR011237|IPR011249|IPR011765 Metalloenzyme, LuxS/M16 peptidase-like|Peptidase M16 domain|Peptidase M16, C-terminal|Peptidase M16, N-terminal|Peptidase M16, zinc-binding site GO:0003824|GO:0004222|GO:0006508|GO:0046872 G3DSA:3.30.830.10|PF00675|PF05193|PS00143|SSF63411 BKD09_RS08530 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MF_00161|PF01252|PR00781|PS00855|TIGR00077 BKD09_RS08535 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001412|IPR002300|IPR002301|IPR009008|IPR009080|IPR013155|IPR014729|IPR023585 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia|Aminoacyl-tRNA synthetase, class Ia, anticodon-binding|Isoleucine-tRNA ligase|Isoleucine-tRNA ligase, type 1|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold|Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0000166|GO:0002161|GO:0004812|GO:0004822|GO:0005524|GO:0005737|GO:0006418|GO:0006428 G3DSA:1.10.730.10|G3DSA:3.40.50.620|G3DSA:3.90.740.10|MF_02002|PF00133|PF08264|PR00984|PS00178|SSF47323|SSF50677|SSF52374|TIGR00392 BKD09_RS08540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002606|IPR014729|IPR015864|IPR015865|IPR023465 FAD synthetase|Riboflavin kinase domain|Riboflavin kinase domain, bacterial/eukaryotic|Riboflavin kinase, bacterial|Rossmann-like alpha/beta/alpha sandwich fold GO:0003919|GO:0008531|GO:0009231 G3DSA:2.40.30.30|G3DSA:3.40.50.620|PF01687|PF06574|PIRSF004491|SM00904|SSF52374|SSF82114|TIGR00083 BKD09_RS08545 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 BKD09_RS08550 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006356|IPR006357|IPR023214 HAD-like domain|HAD-superfamily hydrolase, subfamily IIA|HAD-superfamily hydrolase, subfamily IIA, hypothetical 3 G3DSA:3.40.50.1000|PF13242|PF13344|SSF56784|TIGR01459|TIGR01460 BKD09_RS08555 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001633 EAL domain G3DSA:3.20.20.450|PF00563|SM00052|SSF141868 BKD09_RS08560 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001867|IPR007195|IPR011990|IPR011991|IPR016032|IPR019734 OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Tetratricopeptide repeat|Tetratricopeptide-like helical domain|TolB, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0005515|GO:0006355|GO:0015031|GO:0042597 G3DSA:1.10.10.10|G3DSA:1.25.40.10|G3DSA:3.40.50.10070|PF00486|SM00028|SM00862|SSF46894|SSF48452|SSF52964 BKD09_RS08565 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|SSF53335 BKD09_RS08570 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR017039 Virulence factor BrkB PF03631|TIGR00765 BKD09_RS08575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009937 Putative Actinobacterial Holin-X, holin superfamily III PF07332 BKD09_RS08580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002052|IPR004556|IPR007848|IPR017127|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|Methyltransferase small domain|Modification methylase HemK|Ribosomal protein L3-specific, glutamine-N5-methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0005622|GO:0006479|GO:0008168|GO:0008276|GO:0009007|GO:0032259|GO:0032775 G3DSA:1.10.8.10|G3DSA:3.40.50.150|PF05175|PIRSF037167|PS00092|SSF53335|TIGR00536|TIGR03533 BKD09_RS08585 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 G3DSA:3.90.1170.40|PF02391|SSF54690 BKD09_RS08590 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003749|IPR010034|IPR012675|IPR016155 Beta-grasp domain|Molybdopterin converting factor, subunit 1|Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp|ThiamineS/Molybdopterin converting factor subunit 1 GO:0006777 G3DSA:3.10.20.30|PF02597|SSF54285|TIGR01682 BKD09_RS08595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000462|IPR004570 CDP-alcohol phosphatidyltransferase|CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016020|GO:0016021|GO:0016780 PF01066|PIRSF000847|PS00379|TIGR00560 BKD09_RS08600 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000305|IPR001162|IPR001943|IPR003583|IPR004791|IPR010994|IPR027299 GIY-YIG domain|GIY-YIG nuclease superfamily|Helix-hairpin-helix DNA-binding motif, class 1|RuvA domain 2-like|UVR domain|UvrABC system, subunit C|UvrC family homology region GO:0003677|GO:0005515|GO:0005737|GO:0006281|GO:0009380|GO:0009381 G3DSA:1.10.150.20|G3DSA:3.40.1440.10|G3DSA:4.10.860.10|MF_00203|PF01541|PF02151|PF08459|PF14520|SM00278|SM00465|SSF46600|SSF47781|SSF82771|TIGR00194 BKD09_RS08605 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 BKD09_RS08610 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002059|IPR011129|IPR012156|IPR012340|IPR019844 Cold shock protein|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|SM00357|SSF50249 BKD09_RS08615 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007473|IPR029063 Ribosomal RNA large subunit methyltransferase J|S-adenosyl-L-methionine-dependent methyltransferase GO:0008649|GO:0070475 G3DSA:3.40.50.150|MF_00934|PF04378|SSF53335 BKD09_RS08620 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001568|IPR018188 Ribonuclease T2, His active site 1|Ribonuclease T2-like GO:0003723|GO:0033897 G3DSA:3.90.730.10|PF00445|PS00530|SSF55895 BKD09_RS08635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR022061 Protein of unknown function DUF3617 PF12276 BKD09_RS08640 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002559|IPR008490 Transposase InsH, N-terminal|Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PF01609|PF05598 BKD09_RS08645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003594|IPR003660|IPR003661|IPR004358 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00672|PF02518|PR00344|SM00304|SM00387|SM00388|SSF47384|SSF55874 BKD09_RS08650 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF46894|SSF52172 BKD09_RS08655 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000835|IPR011991|IPR023187 MarR-type HTH domain|Transcriptional regulator MarR-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12802|PR00598|PS01117|SM00347|SSF46785 BKD09_RS08660 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001544|IPR005786|IPR018300 Aminotransferase class IV|Aminotransferase, class IV, conserved site|Branched-chain amino acid aminotransferase II GO:0003824|GO:0004084|GO:0008152|GO:0009081 G3DSA:3.20.10.10|G3DSA:3.30.470.10|PF01063|PIRSF006468|PS00770|SSF56752|TIGR01123 BKD09_RS08665 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018756 Domain of unknown function DUF2314 PF10077 BKD09_RS08670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004154|IPR004516|IPR015807 Anticodon-binding|Histidine-tRNA ligase|Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0004821|GO:0005524|GO:0005737|GO:0006427 G3DSA:3.30.930.10|G3DSA:3.40.50.800|MF_00127|PF03129|PF13393|PIRSF001549|SSF52954|SSF55681|TIGR00442 BKD09_RS08675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004370|IPR014347 4-oxalocrotonate tautomerase|Tautomerase/MIF superfamily GO:0006725|GO:0016853 G3DSA:3.30.429.20|PF01361|SSF55331 BKD09_RS08680 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006683|IPR025540|IPR029069 Fluoroacetyl-CoA thioesterase|HotDog domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|PIRSF014972|SSF54637 BKD09_RS08685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000304|IPR008927|IPR016040|IPR028939|IPR029036 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|Pyrroline-5-carboxylate reductase|Pyrroline-5-carboxylate reductase, catalytic, N-terminal|Pyrroline-5-carboxylate reductase, dimerisation domain GO:0004735|GO:0006561|GO:0055114 G3DSA:1.10.3730.10|G3DSA:3.40.50.720|MF_01925|PF03807|PF14748|PIRSF000193|SSF48179|SSF51735|TIGR00112 BKD09_RS08690 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019660 Putative sensory transduction regulator YbjN PF10722 BKD09_RS08695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 G3DSA:3.40.50.960|MF_00178|PF00885|SSF52121 BKD09_RS08700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005330|IPR007492|IPR012073 LytTR DNA-binding domain|LytTR MHYT transcriptional regulator|MHYT domain GO:0003677 G3DSA:2.40.50.40|PF03707|PF04397|PIRSF036615|SM00850 BKD09_RS08705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002346|IPR005107|IPR016166|IPR016167|IPR016169 CO dehydrogenase flavoprotein, C-terminal|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|Molybdopterin dehydrogenase, FAD-binding GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.30.390.50|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF00941|PF03450|SM01092|SSF55447|SSF56176 BKD09_RS08710 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001041|IPR002888|IPR012675 2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|[2Fe-2S]-binding GO:0009055|GO:0016491|GO:0046872|GO:0051536|GO:0055114 G3DSA:1.10.150.120|G3DSA:3.10.20.30|PF01799|SSF47741|SSF54292 BKD09_RS08715 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000674|IPR008274|IPR012780 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding|Carbon-monoxide dehydrogenase, large subunit GO:0005507|GO:0016491|GO:0018492|GO:0030151|GO:0055114 G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF01315|PF02738|SM01008|SSF54665|SSF56003|TIGR02416 BKD09_RS08720 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003593|IPR011704|IPR027417 AAA+ ATPase domain|ATPase, dynein-related, AAA domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF07728|SM00382|SSF52540 BKD09_RS08725 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002035|IPR008912|IPR011195 Uncharacterised conserved protein UCP010256|Uncharacterised protein family CoxE-like|von Willebrand factor, type A G3DSA:3.40.50.410|PF05762|PIRSF010256|SSF53300 BKD09_RS08730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003777|IPR027051 XdhC Rossmann domain|XdhC- CoxI PF02625|PF13478 BKD09_RS08735 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010419|IPR023393 Carbon monoxide dehydrogenase subunit G|START-like domain G3DSA:3.30.530.20|PF06240|SSF55961 BKD09_RS08740 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011095|IPR013815|IPR013816 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|D-alanine--D-alanine ligase, C-terminal GO:0003824|GO:0005524|GO:0008716 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|PF07478|SSF56059 BKD09_RS08745 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase PF15887 BKD09_RS08750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000842|IPR005946|IPR029057|IPR029099 Phosphoribosyl pyrophosphate synthetase, conserved site|Phosphoribosyltransferase-like|Ribose-phosphate diphosphokinase|Ribose-phosphate pyrophosphokinase, N-terminal domain GO:0000287|GO:0004749|GO:0009156|GO:0009165|GO:0044249 G3DSA:3.40.50.2020|MF_00583_B|PF13793|PF14572|PS00114|SM01400|SSF53271|TIGR01251 BKD09_RS08765 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003730|IPR011324 Cytotoxic necrotizing factor-like, catalytic|Multi-copper polyphenol oxidoreductase, laccase G3DSA:3.60.140.10|PF02578|SSF64438|TIGR00726 BKD09_RS08770 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003788|IPR029063 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA|S-adenosyl-L-methionine-dependent methyltransferase PF02636|SSF53335 BKD09_RS08775 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 MF_01147|PF01790|PS01311|TIGR00544 BKD09_RS08780 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002925|IPR029058 Alpha/Beta hydrolase fold|Dienelactone hydrolase GO:0016787 G3DSA:3.40.50.1820|PF01738|SSF53474 BKD09_RS08785 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007475 Membrane fusogenic activity PF04380 BKD09_RS08790 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001021|IPR001859|IPR011035|IPR020056|IPR020057|IPR029751 Ribosomal protein L25|Ribosomal protein L25, beta domain|Ribosomal protein L25, long-form|Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain|Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain|Trypanosoma cruzi ribosomal protein P2-like GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0008097 G3DSA:2.170.120.20|G3DSA:2.40.240.10|MF_01334|PD012503|PF01386|PF14693|PR00456|SSF50715|TIGR00731 BKD09_RS08795 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001328|IPR018171 Peptidyl-tRNA hydrolase|Peptidyl-tRNA hydrolase, conserved site GO:0004045 G3DSA:3.40.50.1470|MF_00083|PF01195|PS01195|PS01196|SSF53178|TIGR00447 BKD09_RS08800 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004396|IPR006073|IPR012675|IPR012676|IPR013029|IPR023192|IPR027417 Beta-grasp domain|Domain of unknown function DUF933|GTP binding domain|P-loop containing nucleoside triphosphate hydrolase|Ribosome-binding ATPase YchF/Obg-like ATPase 1|TGS-like|TGS-like domain GO:0005525 G3DSA:1.10.150.300|G3DSA:3.10.20.30|G3DSA:3.40.50.300|MF_00944|PF01926|PF06071|PIRSF006641|PR00326|SSF52540|SSF81271|TIGR00092 BKD09_RS08805 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025557 Protein of unknown function DUF4282 PF14110 BKD09_RS08810 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002539|IPR029069 HotDog domain|MaoC-like domain G3DSA:3.10.129.10|PF01575|SSF54637 BKD09_RS08815 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002539|IPR029069 HotDog domain|MaoC-like domain G3DSA:3.10.129.10|PF01575|SSF54637 BKD09_RS08840 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009959|IPR032710 NTF2-like domain|Polyketide cyclase SnoaL-like domain G3DSA:3.10.450.50|PF12680|SSF54427 BKD09_RS08845 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009959|IPR032710 NTF2-like domain|Polyketide cyclase SnoaL-like domain G3DSA:3.10.450.50|PF12680|SSF54427 BKD09_RS08855 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001650|IPR001943|IPR004807|IPR006935|IPR014001|IPR024759|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|UVR domain|UvrABC system, subunit B|UvrB, YAD/RRR-motif-containing domain GO:0003677|GO:0005515|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432|GO:0016787 G3DSA:3.30.2060.10|G3DSA:3.40.50.300|G3DSA:4.10.860.10|MF_00204|PF00271|PF02151|PF04851|PF12344|SM00487|SM00490|SSF46600|SSF52540|TIGR00631 BKD09_RS08870 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 BKD09_RS08875 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925 BKD09_RS08885 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004045|IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF13417|SSF47616|SSF52833 BKD09_RS08895 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014917 Protein of unknown function DUF1800 PF08811 BKD09_RS08900 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010869 Protein of unknown function DUF1501 PF07394 BKD09_RS08905 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007138|IPR011008 Antibiotic biosynthesis monooxygenase domain|Dimeric alpha-beta barrel G3DSA:3.30.70.900|PF03992|SSF54909 BKD09_RS08910 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR020471|IPR023210 Aldo/keto reductase|NADP-dependent oxidoreductase domain GO:0016491|GO:0055114 G3DSA:3.20.20.100|PF00248|PR00069|SSF51430 BKD09_RS08915 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 BKD09_RS08920 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014 PAS domain G3DSA:3.30.450.20|PF12860|SM00091|SSF55785 BKD09_RS08930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004045|IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF02798|SSF47616|SSF52833 BKD09_RS08935 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|SSF53383 BKD09_RS08940 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009333 Protein of unknown function DUF992 PF06186 BKD09_RS08945 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000640|IPR005225|IPR005517|IPR009000|IPR009022|IPR014721|IPR020568|IPR027417 Elongation factor G, III-V domain|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Small GTP-binding protein domain|Translation elongation factor EFG, V domain|Translation elongation factor EFG/EF2, domain IV|Translation protein, beta-barrel domain GO:0005525 G3DSA:2.40.30.10|G3DSA:3.30.230.10|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|PF00009|PF00679|PF03764|PF14492|SM00838|SM00889|SSF50447|SSF52540|SSF54211|SSF54980|TIGR00231 BKD09_RS08950 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413 BKD09_RS08955 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002645|IPR011547 SLC26A/SulP transporter domain|STAS domain GO:0008272|GO:0015116|GO:0016021 G3DSA:3.30.750.24|PF00916|PF01740|SSF52091 BKD09_RS08965 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006151|IPR011342|IPR013708|IPR016040|IPR022893 NAD(P)-binding domain|Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase|Shikimate dehydrogenase|Shikimate dehydrogenase family|Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0019632|GO:0050661|GO:0055114 G3DSA:3.40.192.10|G3DSA:3.40.50.720|MF_00222|PF01488|PF08501|SSF51735|SSF53223|TIGR00507 BKD09_RS08980 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000262|IPR008259|IPR012133|IPR013785 Aldolase-type TIM barrel|Alpha-hydroxy acid dehydrogenase, FMN-dependent|FMN-dependent alpha-hydroxy acid dehydrogenase, active site|FMN-dependent dehydrogenase GO:0003824|GO:0010181|GO:0016491|GO:0055114 G3DSA:3.20.20.70|PF01070|PIRSF000138|PS00557|SSF51395 BKD09_RS08990 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005841|IPR005843|IPR005844|IPR005845|IPR005846|IPR006352|IPR016055 Alpha-D-phosphohexomutase superfamily|Alpha-D-phosphohexomutase, C-terminal|Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III|Alpha-D-phosphohexomutase, alpha/beta/alpha domain I|Alpha-D-phosphohexomutase, alpha/beta/alpha domain II|Alpha-D-phosphohexomutase, alpha/beta/alpha domain III|Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966|GO:0016868|GO:0071704 G3DSA:3.30.310.50|G3DSA:3.40.120.10|MF_01554_B|PF00408|PF02878|PF02879|PF02880|PR00509|SSF53738|SSF55957|TIGR01455 BKD09_RS08995 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS09000 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 BKD09_RS09005 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 BKD09_RS09010 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004045|IPR010987|IPR012336 Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF02798|PF13410|SSF47616|SSF52833 BKD09_RS09015 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 BKD09_RS09025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000192|IPR006271|IPR015421|IPR015424|IPR022278 Aminotransferase class V domain|Phosphoserine aminotransferase|Phosphoserine aminotransferase, Methanosarcina-type|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824|GO:0004648|GO:0006564 G3DSA:3.40.640.10|PF00266|PIRSF000525|SSF53383|TIGR01365 BKD09_RS09030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002912|IPR006139|IPR006140|IPR006236|IPR016040|IPR029009|IPR029752|IPR029753 ACT domain|Allosteric substrate binding domain|D-3-phosphoglycerate dehydrogenase|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain GO:0004617|GO:0006564|GO:0008152|GO:0016597|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.30.1330.90|G3DSA:3.30.70.260|G3DSA:3.40.50.720|PF00389|PF01842|PF02826|PS00065|PS00670|PS00671|SSF143548|SSF51735|SSF52283|SSF55021|TIGR01327 BKD09_RS09035 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002155|IPR016039|IPR020610|IPR020613|IPR020615|IPR020616|IPR020617 Thiolase|Thiolase, C-terminal|Thiolase, N-terminal|Thiolase, active site|Thiolase, acyl-enzyme intermediate active site|Thiolase, conserved site|Thiolase-like GO:0003824|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00108|PF02803|PIRSF000429|PS00098|PS00099|PS00737|SSF53901|TIGR01930 BKD09_RS09040 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002938|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain GO:0016491|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF01494|PR00420|SSF51905 BKD09_RS09045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR003594|IPR003661|IPR013767 Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0006355|GO:0007165 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF00989|PF02518|PF13188|PF13426|SM00091|SM00387|SM00388|SSF47384|SSF55785|SSF55874|TIGR00229 BKD09_RS09050 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010234|IPR018968 Phasin|Phasin, subfamily 2 PF09361|TIGR01985 BKD09_RS09060 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002182|IPR011990|IPR027417 NB-ARC|P-loop containing nucleoside triphosphate hydrolase|Tetratricopeptide-like helical domain GO:0005515|GO:0043531 G3DSA:1.25.40.10|G3DSA:3.40.50.300|PF00931|PF13289|SSF48452|SSF52540 BKD09_RS09070 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025196 Domain of unknown function DUF4126 PF13548 BKD09_RS09075 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004776 Membrane transport protein GO:0016021|GO:0055085 PF03547 BKD09_RS09085 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002586|IPR027417 CobQ/CobB/MinD/ParA nucleotide binding domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF01656|PIRSF009320|SSF52540 BKD09_RS09095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002220|IPR005263|IPR013785|IPR020625 4-hydroxy-tetrahydrodipicolinate synthase, DapA|Aldolase-type TIM barrel|DapA-like|Schiff base-forming aldolase, active site GO:0003824|GO:0008152|GO:0008840|GO:0009089|GO:0016829 G3DSA:3.20.20.70|MF_00418|PF00701|PIRSF001365|PR00146|PS00666|SM01130|SSF51569 BKD09_RS09100 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS09105 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000103|IPR005982|IPR008255|IPR023753 FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, class-II|Pyridine nucleotide-disulphide oxidoreductase, class-II, active site|Thioredoxin reductase GO:0004791|GO:0005737|GO:0016491|GO:0019430|GO:0055114 G3DSA:3.50.50.60|PF07992|PR00368|PR00469|PS00573|SSF51905|TIGR01292 BKD09_RS09110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000485|IPR011008|IPR011991|IPR019885|IPR019887|IPR019888 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Transcription regulator HTH, AsnC-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13412|PR00033|PS00519|SM00344|SSF46785|SSF54909 BKD09_RS09115 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001437|IPR006359|IPR018151|IPR022691|IPR023459|IPR028624 Transcription elongation factor GreA|Transcription elongation factor GreA/GreB|Transcription elongation factor GreA/GreB family|Transcription elongation factor, GreA/GreB, C-terminal|Transcription elongation factor, GreA/GreB, N-terminal|Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784|GO:0070063 G3DSA:1.10.287.180|G3DSA:3.10.50.30|MF_00105|PF01272|PF03449|PIRSF006092|PS00829|SSF46557|SSF54534|TIGR01462 BKD09_RS09120 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005479|IPR005480|IPR005483|IPR006275|IPR011607|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Carbamoyl-phosphate synthase large subunit, CPSase domain|Carbamoyl-phosphate synthase, large subunit|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain|Carbamoyl-phosphate synthetase, large subunit oligomerisation domain|Methylglyoxal synthase-like domain|Pre-ATP-grasp domain GO:0003824|GO:0005524|GO:0006807 G3DSA:1.10.1030.10|G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.1380|G3DSA:3.40.50.20|MF_01210_B|PF02142|PF02786|PF02787|PR00098|PS00867|SM00851|SM01096|SSF48108|SSF52335|SSF52440|SSF56059|TIGR01369 BKD09_RS09125 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS09130 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001845|IPR011991 HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PR00778|SM00418|SSF46785 BKD09_RS09135 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13649|SSF53335 BKD09_RS09140 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002177|IPR008331|IPR009078|IPR012347 DNA-binding protein Dps|Ferritin-like superfamily|Ferritin-related|Ferritin/DPS protein domain GO:0006879|GO:0006950|GO:0008199|GO:0055114 G3DSA:1.20.1260.10|PF00210|PIRSF005900|PR01346|SSF47240 BKD09_RS09145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011051|IPR013096|IPR014500|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold|Uncharacterised conserved protein UCP019307, cupin-type G3DSA:2.60.120.10|PF07883|PIRSF019307|SSF51182 BKD09_RS09150 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002474|IPR006274|IPR017926|IPR029062 Carbamoyl-phosphate synthase, small subunit|Carbamoyl-phosphate synthase, small subunit N-terminal domain|Class I glutamine amidotransferase-like|Glutamine amidotransferase GO:0004088|GO:0006207|GO:0006541 G3DSA:3.40.50.880|G3DSA:3.50.30.20|MF_01209|PF00117|PF00988|PR00096|PR00097|PR00099|SM01097|SSF52021|SSF52317|TIGR01368 BKD09_RS09155 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|PR00111|SSF53474 BKD09_RS09160 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003789|IPR019004|IPR023168 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related|Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal|Uncharacterised domain YOR215C, mitochondrial GO:0016884 G3DSA:1.10.10.410|G3DSA:1.10.1510.10|PF09424|SSF89095 BKD09_RS09165 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000639|IPR010497|IPR016292|IPR029058 Alpha/Beta hydrolase fold|Epoxide hydrolase|Epoxide hydrolase, N-terminal|Epoxide hydrolase-like GO:0003824|GO:0033961 G3DSA:3.40.50.1820|PF06441|PIRSF001112|PR00412|SSF53474 BKD09_RS09170 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801 BKD09_RS09175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12802|SM00347|SSF46785 BKD09_RS09180 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009959|IPR032710 NTF2-like domain|Polyketide cyclase SnoaL-like domain G3DSA:3.10.450.50|PF12680|SSF54427 BKD09_RS09190 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR003594|IPR003660|IPR003661|IPR004358|IPR011006|IPR033479 CheY-like superfamily|Double Cache domain 1|HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF00672|PF02518|PF02743|PR00344|SM00304|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55874 BKD09_RS09195 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018692 Predicted integral membrane protein DUF2189 PF09955 BKD09_RS09205 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002931 Transglutaminase-like G3DSA:3.90.260.10|PF01841|SM00460|SSF54001 BKD09_RS09220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013538|IPR023393 Activator of Hsp90 ATPase homologue 1-like|START-like domain GO:0006950 G3DSA:3.30.530.20|PF08327|SSF55961 BKD09_RS09225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013538|IPR023393 Activator of Hsp90 ATPase homologue 1-like|START-like domain GO:0006950 G3DSA:3.30.530.20|PF08327|SSF55961 BKD09_RS09230 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001845|IPR011991 HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12840|PR00778|SM00418|SSF46785 BKD09_RS09245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PF01810|PIRSF006324 BKD09_RS09250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021994 Protein of unknown function DUF3592 PF12158 BKD09_RS09255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002508|IPR007709|IPR011227 N-acetylmuramoyl-L-alanine amidase, catalytic domain|N-formylglutamate amidohydrolase|Uncharacterised conserved protein UCP029730 GO:0008745|GO:0009253 G3DSA:3.40.630.40|PF05013|PIRSF029730|SSF53187 BKD09_RS09260 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009288|IPR013024 Butirosin biosynthesis, BtrG-like|Gamma-glutamylcyclotransferase, AIG2-like G3DSA:3.10.490.10|PF06094|SSF110857 BKD09_RS09265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010644|IPR011008 Dimeric alpha-beta barrel|Putative heme-dependent peroxidase/Chlorite dismutase G3DSA:3.30.70.1100|PF06778|SSF54909 BKD09_RS09270 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002694|IPR006171|IPR006295|IPR013264|IPR019475|IPR030846 DNA primase DnaG, bacteria|DNA primase, DnaB-helicase binding domain|DNA primase, DnaG|DNA primase, catalytic core, N-terminal|Toprim domain|Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0006269|GO:0008270|GO:0016779 G3DSA:1.20.50.20|G3DSA:3.40.1360.10|G3DSA:3.90.580.10|G3DSA:3.90.980.10|MF_00974|PF01807|PF08275|PF10410|PF13662|PIRSF002811|SM00400|SM00493|SSF56731|SSF57783|TIGR01391 BKD09_RS09275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000943|IPR007127|IPR007624|IPR007627|IPR007630|IPR007631|IPR009042|IPR011991|IPR012760|IPR013324|IPR013325|IPR014284|IPR028630 RNA polymerase sigma factor 70, non-essential domain|RNA polymerase sigma factor 70, region 1.1|RNA polymerase sigma factor RpoD|RNA polymerase sigma factor RpoD, C-terminal|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 1.2|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 3|RNA polymerase sigma-70 region 4|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.601.10|MF_00963|PF00140|PF03979|PF04539|PF04542|PF04545|PF04546|PR00046|PS00715|PS00716|SSF88659|SSF88946|TIGR02393|TIGR02937 BKD09_RS09285 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006664|IPR006665 OmpA-like domain|Outer membrane protein, bacterial GO:0009279|GO:0016021 G3DSA:3.30.1330.60|PF00691|PR01021|SSF103088 BKD09_RS09290 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011970|IPR023346|IPR031304 Lysozyme-like domain|Lytic murein transglycosylase|Transglycosylase SLT domain 2 G3DSA:1.10.530.10|PF13406|SSF53955|TIGR02283 BKD09_RS09295 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|SM00822|SSF51735 BKD09_RS09300 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 BKD09_RS09305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PF01810|PIRSF006324 BKD09_RS09310 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000160|IPR029787 GGDEF domain|Nucleotide cyclase G3DSA:3.30.70.270|PF00990|SM00267|SSF55073|TIGR00254 BKD09_RS09315 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 G3DSA:3.40.80.10|PF01510|SM00644|SSF55846 BKD09_RS09330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000943|IPR007627|IPR007630|IPR009042|IPR011991|IPR012759|IPR013324|IPR013325|IPR014284|IPR016263 RNA polymerase sigma factor RpoH, proteobacteria|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 1.2|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 4|RNA polymerase sporulation-specific sigma factor|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006351|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987|GO:0030435 G3DSA:1.10.10.10|G3DSA:1.10.601.10|MF_00961|PF00140|PF04542|PF04545|PIRSF000770|PR00046|PS00715|PS00716|SSF88659|SSF88946|TIGR02392|TIGR02937 BKD09_RS09335 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002942|IPR006145|IPR006224|IPR006225|IPR020103 Pseudouridine synthase, RluC/RluD|Pseudouridine synthase, RluC/RluD, conserved site|Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.10.290.10|PF00849|PS01129|SM00363|SSF55120|SSF55174|TIGR00005 BKD09_RS09345 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR022548 Domain of unknown function DUF2846 PF11008 BKD09_RS09355 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase G3DSA:3.90.1140.10|PF13563|SSF55144 BKD09_RS09360 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13181|PF13432|SM00028|SSF48452 BKD09_RS09365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011059|IPR013108|IPR032466 Amidohydrolase 3|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF07969|SSF51338|SSF51556 BKD09_RS09370 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003495|IPR011629|IPR027417 CobW/HypB/UreG, nucleotide-binding domain|Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.30.1220.10|G3DSA:3.40.50.300|PF02492|PF07683|SM00833|SSF52540|SSF90002 BKD09_RS09375 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006913|IPR011057 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V|Mss4-like GO:0008152|GO:0016846 G3DSA:3.90.1590.10|PF04828|SSF51316 BKD09_RS09380 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004370|IPR014347 4-oxalocrotonate tautomerase|Tautomerase/MIF superfamily GO:0006725|GO:0016853 G3DSA:3.30.429.10|PF14552|SSF55331 BKD09_RS09400 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003660|IPR004089|IPR004090|IPR033480 Chemotaxis methyl-accepting receptor|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain|Single Cache domain 2 GO:0004871|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|G3DSA:3.30.450.20|PF00015|PF00672|PF17200|PR00260|SM00283|SM00304|SM01049|SSF58104 BKD09_RS09405 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000022|IPR000089|IPR005479|IPR005481|IPR005482|IPR011053|IPR011054|IPR013815|IPR013816|IPR016185|IPR029045 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Biotin carboxylase, C-terminal|Biotin carboxylase-like, N-terminal domain|Biotin/lipoyl attachment|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain|Carboxyl transferase|ClpP/crotonase-like domain|Pre-ATP-grasp domain|Rudiment single hybrid motif|Single hybrid motif GO:0003824|GO:0005524 G3DSA:2.40.50.100|G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|G3DSA:3.90.226.10|PF00289|PF00364|PF01039|PF02785|PF02786|PS00867|SM00878|SSF51230|SSF51246|SSF52096|SSF52440|SSF56059 BKD09_RS09410 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002078|IPR002197|IPR003593|IPR009057|IPR025662|IPR025943|IPR025944|IPR027417|IPR029016 AAA+ ATPase domain|DNA binding HTH domain, Fis-type|GAF domain-like|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00158|PF02954|PR01590|PS00675|PS00676|PS00688|SM00382|SSF46689|SSF52540|SSF55781 BKD09_RS09415 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002563|IPR012349 FMN-binding split barrel|Flavin reductase like domain GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF01613|SM00903|SSF50475 BKD09_RS09420 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011251 Luciferase-like domain GO:0016705|GO:0055114 G3DSA:3.20.20.30|PF00296|SSF51679 BKD09_RS09425 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 PF05035|SSF53067 BKD09_RS09430 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000887|IPR013785|IPR031338 Aldolase-type TIM barrel|KDPG/KHG aldolase|KDPG/KHG aldolase, active site 2 GO:0003824|GO:0008152|GO:0016829 G3DSA:3.20.20.70|PF01081|PS00160|SSF51569 BKD09_RS09435 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000399|IPR011766|IPR012000|IPR012001|IPR029035|IPR029061 DHS-like NAD/FAD-binding domain|TPP-binding enzyme, conserved site|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0030976 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|PS00187|SSF52467|SSF52518 BKD09_RS09445 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006683|IPR029069 HotDog domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|SSF54637 BKD09_RS09455 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023631 Amidase signature domain G3DSA:3.90.1300.10|PF01425|SSF75304 BKD09_RS09460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014086 Cyanuric acid hydrolase/Barbiturase GO:0016812 PF09663|TIGR02714 BKD09_RS09465 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003029|IPR006641|IPR010994|IPR012337|IPR012340|IPR018974|IPR022967|IPR023097|IPR023319|IPR023323|IPR032639 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|Ribonuclease H-like domain|RuvA domain 2-like|S1 domain|Tex RuvX-like domain|Tex protein, YqgF-like domain|Tex-like domain|Tex-like protein, HTH domain|Tex-like protein, N-terminal|YqgF/RNase H-like domain GO:0003676|GO:0006139 G3DSA:1.10.10.650|G3DSA:1.10.150.310|G3DSA:1.10.3500.10|G3DSA:2.40.50.140|G3DSA:3.30.420.140|PF00575|PF09371|PF12836|PF16921|SM00316|SM00732|SSF158832|SSF47781|SSF50249|SSF53098 BKD09_RS09475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR001867|IPR011006|IPR011991 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF52172 BKD09_RS09480 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003594|IPR003660|IPR003661|IPR004358 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00672|PF02518|PR00344|SM00304|SM00387|SSF158472|SSF47384|SSF55874 BKD09_RS09485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00196|PR00038|PS00622|SM00421|SSF46894 BKD09_RS09490 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001478|IPR001940|IPR009003 PDZ domain|Peptidase S1, PA clan|Peptidase S1C GO:0004252|GO:0005515|GO:0006508 G3DSA:2.30.42.10|G3DSA:2.40.10.10|PF13180|PF13365|PR00834|SM00228|SSF50156|SSF50494 BKD09_RS09495 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|SSF54593 BKD09_RS09500 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002220|IPR013785 Aldolase-type TIM barrel|DapA-like GO:0003824|GO:0008152|GO:0016829 G3DSA:3.20.20.70|PF00701|PIRSF001365|PR00146|SM01130|SSF51569 BKD09_RS09505 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000674|IPR008274 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF01315|PF02738|SM01008|SSF54665|SSF56003 BKD09_RS09510 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|SSF47203|SSF56645 BKD09_RS09515 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|SSF47203|SSF56645 BKD09_RS09520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001753|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|SSF52096 BKD09_RS09525 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007156|IPR023353 LemA|LemA-like domain G3DSA:1.20.1440.20|PF04011|SSF140478 BKD09_RS09530 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007621 TPM domain PF04536 BKD09_RS09535 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007621 TPM domain PF04536 BKD09_RS09550 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004045|IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF13417|SSF47616|SSF52833 BKD09_RS09555 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|SSF89796 BKD09_RS09560 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002872|IPR005933|IPR015590|IPR016160|IPR016161|IPR016162|IPR016163|IPR024082|IPR024089|IPR029041 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde/histidinol dehydrogenase|Delta-1-pyrroline-5-carboxylate dehydrogenase 3|FAD-linked oxidoreductase-like|Proline dehydrogenase PutA, domain I/II|Proline dehydrogenase PutA, domain II|Proline dehydrogenase domain GO:0003842|GO:0006561|GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:1.10.2060.10|G3DSA:3.20.20.220|G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PF01619|PF14850|PS00070|SSF51730|SSF53720|SSF81935|TIGR01238 BKD09_RS09565 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000485|IPR011008|IPR011991|IPR019885|IPR019887|IPR019888 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Transcription regulator HTH, AsnC-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13412|PR00033|PS00519|SM00344|SSF46785|SSF54909 BKD09_RS09570 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002059|IPR011129|IPR012156|IPR012340|IPR019844 Cold shock protein|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|SM00357|SSF50249 BKD09_RS09575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SSF46626 BKD09_RS09580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000572|IPR005066|IPR008335|IPR014756 Eukaryotic molybdopterin oxidoreductase|Immunoglobulin E-set|Moybdenum cofactor oxidoreductase, dimerisation|Oxidoreductase, molybdopterin-binding domain GO:0016491|GO:0030151|GO:0042128|GO:0055114 G3DSA:2.60.40.650|G3DSA:3.90.420.10|PF00174|PF03404|PR00407|SSF56524|SSF81296 BKD09_RS09585 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001041|IPR001054|IPR012675|IPR029787 2Fe-2S ferredoxin-type iron-sulfur binding domain|Adenylyl cyclase class-3/4/guanylyl cyclase|Beta-grasp domain|Nucleotide cyclase GO:0009055|GO:0009190|GO:0016849|GO:0035556|GO:0051536 G3DSA:3.10.20.30|G3DSA:3.30.70.1230|PF00111|PF00211|SM00044|SSF54292|SSF55073|SSF81343 BKD09_RS09590 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic PF13231 BKD09_RS09610 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006507|IPR021147 Protein of unknown function DUF697|Uncharacterised protein family UPF0283 PF05128|TIGR01620 BKD09_RS09615 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007413 Protein of unknown function DUF463, YcjX-like protein PF04317|PIRSF019381 BKD09_RS09620 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004254 AdipoR/Haemolysin-III-related GO:0016021 PF03006 BKD09_RS09625 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00081|PS00061|SSF51735 BKD09_RS09630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12802|SM00347|SSF46785 BKD09_RS09635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SM00822|SSF51735 BKD09_RS09640 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000399|IPR011766|IPR012000|IPR012001|IPR029035|IPR029061 DHS-like NAD/FAD-binding domain|TPP-binding enzyme, conserved site|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0030976 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|PS00187|SSF52467|SSF52518 BKD09_RS09645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029069 HotDog domain G3DSA:3.10.129.10|PF13452|SSF54637 BKD09_RS09650 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|SSF89796 BKD09_RS09655 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006089|IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase, conserved site|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PS00072|PS00073|SSF47203|SSF56645 BKD09_RS09660 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS09665 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001128|IPR002397|IPR017972 Cytochrome P450|Cytochrome P450, B-class|Cytochrome P450, conserved site GO:0005506|GO:0016705|GO:0020037|GO:0055114 G3DSA:1.10.630.10|PF00067|PR00359|PS00086|SSF48264 BKD09_RS09670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001128|IPR002397|IPR017972 Cytochrome P450|Cytochrome P450, B-class|Cytochrome P450, conserved site GO:0005506|GO:0016705|GO:0020037|GO:0055114 G3DSA:1.10.630.10|PF00067|PR00359|PS00086|SSF48264 BKD09_RS09675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010295 Protein of unknown function DUF898 PF05987 BKD09_RS09680 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001915 Peptidase M48 GO:0004222|GO:0006508 G3DSA:3.30.2010.10|PF01435 BKD09_RS09685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005765|IPR029057 Phosphoribosyltransferase-like|Uracil phosphoribosyl transferase GO:0004845|GO:0006223 G3DSA:3.40.50.2020|MF_01218_B|PF14681|SSF53271|TIGR01091 BKD09_RS09690 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012469 Protein of unknown function DUF1688 PF07958 BKD09_RS09695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR022163|IPR032677 GTP cyclohydrolase II|GTP cyclohydrolase N-terminal PF00925|PF12471|SSF142695 BKD09_RS09700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme G3DSA:3.40.50.1100|PF00291|SSF53686 BKD09_RS09705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021323 Protein of unknown function DUF2927 PF11150 BKD09_RS09710 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005490 L,D-transpeptidase catalytic domain GO:0016740 G3DSA:2.40.440.10|PF03734|SSF141523 BKD09_RS09715 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000399|IPR011766|IPR012001|IPR029061 TPP-binding enzyme, conserved site|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0000287|GO:0003824|GO:0030976 G3DSA:3.40.50.970|PF02775|PF02776|PS00187|SSF52518 BKD09_RS09725 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010255|IPR019791 Haem peroxidase|Haem peroxidase, animal GO:0004601|GO:0006979|GO:0020037|GO:0055114 G3DSA:1.10.640.10|PF03098|SSF48113 BKD09_RS09730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021937 Protein of unknown function DUF3551 PF12071 BKD09_RS09745 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001437|IPR023459 Transcription elongation factor GreA/GreB family|Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784|GO:0070063 G3DSA:3.10.50.30|PF01272|PIRSF006092|SSF54534 BKD09_RS09750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SSF48452 BKD09_RS09775 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|SSF56300 BKD09_RS09780 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011852 TRAP transporter solute receptor, TAXI family G3DSA:3.40.190.10|PF16868|SSF53850 BKD09_RS09785 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025333 Protein of unknown function DUF4239 PF14023 BKD09_RS09790 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS09795 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 PF04116 BKD09_RS09800 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012394|IPR015590|IPR016161|IPR016162|IPR016163|IPR029510 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase NAD(P)-dependent|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase GO:0004030|GO:0006081|GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PIRSF036492|PS00687|SSF53720 BKD09_RS09805 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF00106|PR00080|PR00081|SSF51735 BKD09_RS09810 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002104|IPR011010|IPR013762|IPR023109|IPR025166 DNA breaking-rejoining enzyme, catalytic core|Domain of unknown function DUF4102|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PF13356|SSF56349 BKD09_RS09830 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006683|IPR006684|IPR029069 Acyl-CoA thioester hydrolase YbgC/YbaW family|HotDog domain|Thioesterase domain GO:0016787 G3DSA:3.10.129.10|PF03061|PIRSF003230|SSF54637|TIGR00051 BKD09_RS09835 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006683|IPR006684|IPR029069 Acyl-CoA thioester hydrolase YbgC/YbaW family|HotDog domain|Thioesterase domain GO:0016787 G3DSA:3.10.129.10|PF03061|SSF54637|TIGR00051 BKD09_RS09840 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009783|IPR032710 NTF2-like domain|Protein of unknown function DUF1348 G3DSA:3.10.450.50|PF07080|SSF54427 BKD09_RS09845 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR017926|IPR029062 Class I glutamine amidotransferase-like|Glutamine amidotransferase G3DSA:3.40.50.880|PF00117|SSF52317 BKD09_RS09850 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS09855 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 G3DSA:3.60.110.10|PF00795|SSF56317 BKD09_RS09860 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001638|IPR018313 Solute-binding protein family 3/N-terminal domain of MltF|Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 G3DSA:3.40.190.10|PF00497|PS01039|SM00062|SSF53850 BKD09_RS09865 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 BKD09_RS09870 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030679 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-type amino acid transport system, ATPase component, HisP-type|P-loop containing nucleoside triphosphate hydrolase GO:0003333|GO:0005524|GO:0015424|GO:0016887 G3DSA:3.40.50.300|PF00005|PIRSF039085|PS00211|SM00382|SSF52540 BKD09_RS09875 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001638 Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF00497|SM00062|SSF53850 BKD09_RS09880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002509|IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF01522|SSF88713 BKD09_RS09890 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|SSF53850 BKD09_RS09895 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|SSF51338|SSF51556 BKD09_RS09900 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS09905 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.40.190.10|PF13416|SSF53850 BKD09_RS09910 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR008995|IPR013611|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0016887|GO:0043190 G3DSA:3.40.50.300|PF00005|PF08402|PS00211|SM00382|SSF50331|SSF52540 BKD09_RS09915 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS09920 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS09925 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006076|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01266|SSF51905|SSF54373 BKD09_RS09930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001041|IPR012675 2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain GO:0009055|GO:0051536 G3DSA:3.10.20.30|PF13510|SSF54292 BKD09_RS09935 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000103|IPR007419|IPR017224|IPR023753 BFD-like [2Fe-2S]-binding domain|FAD/NAD(P)-binding domain|Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B|Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF04324|PF07992|PIRSF037495|PR00368|PR00469|SSF51905 BKD09_RS09940 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006076|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01266|SSF51905 BKD09_RS09945 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006175|IPR013813 Endoribonuclease L-PSP/chorismate mutase-like|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|SSF55298 BKD09_RS09955 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13432|SM00028|SSF48452 BKD09_RS09965 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS09970 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001991|IPR018107|IPR023954 C4-dicarboxylate transport protein|Sodium:dicarboxylate symporter|Sodium:dicarboxylate symporter, conserved site GO:0006835|GO:0015293|GO:0016021 G3DSA:1.10.3860.10|MF_01300|PF00375|PR00173|PS00713|PS00714|SSF118215 BKD09_RS09975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006042|IPR006043 Xanthine/uracil permease|Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PF00860|PS01116|TIGR00801 BKD09_RS09980 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SSF51735 BKD09_RS09985 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009962 Protein of unknown function DUF1488 PF07369 BKD09_RS10005 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003000|IPR026587|IPR026591|IPR029035 DHS-like NAD/FAD-binding domain|Sirtuin family|Sirtuin family, catalytic core small domain|Sirtuin, class II GO:0070403 G3DSA:3.30.1600.10|G3DSA:3.40.50.1220|MF_01967|PF02146|SSF52467 BKD09_RS10010 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002821|IPR008040 Hydantoinase/oxoprolinase|Hydantoinaseoxoprolinase, N-terminal GO:0016787 PF01968|PF05378 BKD09_RS10015 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003692 Hydantoinase B/oxoprolinase GO:0003824 PF02538 BKD09_RS10020 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005152|IPR029058 Alpha/Beta hydrolase fold|Lipase, secreted GO:0004806|GO:0016042 G3DSA:3.40.50.1820|PF03583|PIRSF029171|SSF53474 BKD09_RS10025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025515 Protein of unknown function DUF4403 PF14356 BKD09_RS10030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002372|IPR011047|IPR018391|IPR027295 Pyrrolo-quinoline quinone beta-propeller repeat|Pyrrolo-quinoline quinone repeat|Quinoprotein alcohol dehydrogenase-like domain|Quinoprotein alcohol dehydrogenase-like superfamily G3DSA:2.140.10.10|PF13360|SM00564|SSF50998 BKD09_RS10040 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001638 Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF00497|SM00062|SSF53850 BKD09_RS10045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004045|IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF02798|SSF47616|SSF52833 BKD09_RS10050 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|SSF46689|SSF48498 BKD09_RS10055 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006140|IPR016040 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|NAD(P)-binding domain GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF02826|SSF51735 BKD09_RS10060 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005545|IPR011008 Dimeric alpha-beta barrel|YCII-related G3DSA:3.30.70.1060|PF03795|SSF54909 BKD09_RS10065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007627|IPR011990|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Tetratricopeptide-like helical domain|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0005515|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|G3DSA:1.25.40.10|PF04542|PF08281|SSF48452|SSF88659|SSF88946|TIGR02937 BKD09_RS10070 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019587|IPR023393 Polyketide cyclase/dehydrase|START-like domain G3DSA:3.30.530.20|PF10604|SSF55961 BKD09_RS10075 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028973|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|PhnB-like G3DSA:3.10.180.10|PF06983|SSF54593 BKD09_RS10095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SSF51735 BKD09_RS10100 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 BKD09_RS10105 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR001610|IPR004089|IPR004090|IPR013655 Chemotaxis methyl-accepting receptor|Methyl-accepting chemotaxis protein (MCP) signalling domain|PAC motif|PAS domain|PAS fold-3 GO:0004871|GO:0005515|GO:0006935|GO:0007165|GO:0016020 G3DSA:1.10.287.950|G3DSA:3.30.450.20|PF00015|PF08447|PR00260|SM00086|SM00091|SM00283|SSF55785|SSF58104|TIGR00229 BKD09_RS10115 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005545|IPR011008 Dimeric alpha-beta barrel|YCII-related G3DSA:3.30.70.1060|PF03795|SSF54909 BKD09_RS10120 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005545 YCII-related G3DSA:3.30.70.1060|PF03795 BKD09_RS10125 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893|IPR025996 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal|WHG domain GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PF13305|PR00455|SSF46689|SSF48498 BKD09_RS10130 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021273 Protein of unknown function DUF2852 PF11014 BKD09_RS10145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001451|IPR010493|IPR011004|IPR018357 Hexapeptide repeat|Hexapeptide transferase, conserved site|Serine acetyltransferase, N-terminal|Trimeric LpxA-like GO:0005737|GO:0006535|GO:0009001|GO:0016740 G3DSA:1.10.3130.10|G3DSA:2.160.10.10|PF00132|PF06426|PS00101|SM00971|SSF51161 BKD09_RS10150 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF00106|PR00081|SSF51735 BKD09_RS10155 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000101|IPR029055 Gamma-glutamyltranspeptidase|Nucleophile aminohydrolases, N-terminal GO:0003840|GO:0006749 PF01019|PR01210|PS00462|SSF56235|TIGR00066 BKD09_RS10160 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002898|IPR014163 MotA/TolQ/ExbB proton channel|Tol-Pal system, TolQ GO:0006810|GO:0008565|GO:0015031|GO:0016020|GO:0016021 PF01618|TIGR02796 BKD09_RS10165 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003400|IPR014168 Biopolymer transport protein ExbD/TolR|Biopolymer transport, TolR GO:0005215|GO:0006810|GO:0015031|GO:0016020|GO:0016021 PF02472|TIGR02801 BKD09_RS10175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007195|IPR011659|IPR014167|IPR015943 Tol-Pal system beta propeller repeat-containing protein, TolB|TolB, N-terminal|WD40-like Beta Propeller|WD40/YVTN repeat-like-containing domain GO:0005515|GO:0015031|GO:0017038|GO:0042597 G3DSA:2.130.10.10|G3DSA:3.40.50.10070|MF_00671|PF04052|PF07676|SSF52964|SSF69304|TIGR02800 BKD09_RS10180 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000160|IPR001633|IPR029787 EAL domain|GGDEF domain|Nucleotide cyclase G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00563|PF00990|PF12860|SM00052|SM00267|SSF141868|SSF55073|TIGR00254 BKD09_RS10185 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|SSF55729 BKD09_RS10190 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006664|IPR006665|IPR006690|IPR014169 OmpA-like domain|Outer membrane protein, OmpA-like, conserved site|Outer membrane protein, bacterial|Peptidoglycan-associated lipoprotein GO:0009279|GO:0016021 G3DSA:3.30.1330.60|PF00691|PR01021|PS01068|SSF103088|TIGR02802 BKD09_RS10195 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011990|IPR014162 Tetratricopeptide-like helical domain|Tol-Pal system, YbgF GO:0005515 G3DSA:1.25.40.10|PF13432|SSF48452|TIGR02795 BKD09_RS10200 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011063|IPR012094|IPR012795|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|tRNA(Ile)-lysidine synthase|tRNA(Ile)-lysidine synthase, N-terminal|tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 G3DSA:3.40.50.620|MF_01161|PF01171|SSF52402|TIGR02432 BKD09_RS10205 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000642|IPR003593|IPR003959|IPR003960|IPR005936|IPR011546|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, conserved site|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase|Peptidase M41|Peptidase M41, FtsH extracellular|Peptidase, FtsH GO:0004222|GO:0005524|GO:0006508|GO:0008270|GO:0016020|GO:0016021 G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_01458|PF00004|PF01434|PF06480|PS00674|SM00382|SSF140990|SSF52540|TIGR01241 BKD09_RS10210 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF00561|PR00111|SSF53474 BKD09_RS10215 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 BKD09_RS10220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PF13977|SSF46689|SSF48498 BKD09_RS10225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF00561|SSF53474 BKD09_RS10230 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR011990|IPR019734|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|Nucleotide cyclase|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515|GO:0009190|GO:0016849|GO:0035556 G3DSA:1.25.40.10|G3DSA:3.30.70.1230|PF00211|PF13181|PF14559|SM00028|SM00044|SSF48452|SSF55073 BKD09_RS10235 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR011990|IPR019734|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|Nucleotide cyclase|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515|GO:0009190|GO:0016849|GO:0035556 G3DSA:1.25.40.10|G3DSA:3.30.70.1230|PF00211|SM00028|SSF48452|SSF55073 BKD09_RS10240 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase G3DSA:3.10.180.10|SSF54593 BKD09_RS10255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007047 Flp/Fap pilin component PF04964 BKD09_RS10260 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|SSF46689|SSF48498 BKD09_RS10265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001697|IPR011037|IPR015793|IPR015794|IPR015795|IPR015806|IPR015813|IPR018209 Pyruvate kinase|Pyruvate kinase, C-terminal|Pyruvate kinase, active site|Pyruvate kinase, alpha/beta|Pyruvate kinase, barrel|Pyruvate kinase, beta-barrel insert domain|Pyruvate kinase-like, insert domain|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0000287|GO:0003824|GO:0004743|GO:0006096|GO:0030955 G3DSA:2.40.33.10|G3DSA:3.20.20.60|G3DSA:3.40.1380.20|PF00224|PF02887|PR01050|PS00110|SSF50800|SSF51621|SSF52935|TIGR01064 BKD09_RS10270 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009380 Protein of unknown function DUF1036 PF06282 BKD09_RS10275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023163 SMc04008-like domain G3DSA:1.10.3340.10|PF06844|SSF158757 BKD09_RS10280 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018753 Azospirillum phage Cd, Gp10 MF_00797|PF10073 BKD09_RS10285 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic SSF159888 BKD09_RS10295 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009045|IPR010275 Hedgehog signalling/DD-peptidase zinc-binding domain|Protein of unknown function DUF882 G3DSA:3.30.1380.10|PF05951|SSF55166 BKD09_RS10300 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002477|IPR005490 L,D-transpeptidase catalytic domain|Peptidoglycan binding-like GO:0016740 G3DSA:1.10.101.10|G3DSA:2.40.440.10|PF01471|PF03734|SSF141523|SSF47090 BKD09_RS10305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR011006|IPR025662|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PS00675|PS00676|PS00688|SM00382|SM00448|SSF46689|SSF52172|SSF52540 BKD09_RS10310 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001567|IPR011977|IPR013647|IPR024079 Metallopeptidase, catalytic domain|Oligopeptidase F, N-terminal domain|Peptidase M3A/M3B|Peptidase M3B, oligoendopeptidase-related clade 3 GO:0004222|GO:0006508|GO:0008237 G3DSA:3.40.390.10|PF01432|PF08439|SSF55486|TIGR02290 BKD09_RS10315 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002641|IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase|Patatin/Phospholipase A2-related GO:0006629|GO:0008152 G3DSA:3.40.1090.10|PF01734|SSF52151 BKD09_RS10320 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012422 Cytochrome c oxidase, subunit IV, bacterial aa3 type G3DSA:1.20.5.160|PF07835|SSF81469 BKD09_RS10325 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007698|IPR007886|IPR008143|IPR011032|IPR016040 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal|Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain|Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2|GroES-like|NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.40.50.1770|G3DSA:3.90.180.10|PF01262|PF05222|PS00837|SM01002|SM01003|SSF51735|SSF52283 BKD09_RS10330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal PF12769 BKD09_RS10335 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012136|IPR029035 DHS-like NAD/FAD-binding domain|NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 G3DSA:3.40.50.1220|PF02233|PIRSF000204|SSF52467 BKD09_RS10340 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR022742|IPR029058 Alpha/Beta hydrolase fold|Serine aminopeptidase, S33 G3DSA:3.40.50.1820|PF12146|SSF53474 BKD09_RS10345 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 PF01699 BKD09_RS10350 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 BKD09_RS10360 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13432|SM00028|SSF48452 BKD09_RS10365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001911|IPR018278 Ribosomal protein S21|Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00358|PD005521|PF01165|PS01181|TIGR00030 BKD09_RS10370 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000425|IPR022357|IPR023271|IPR023743 Aquaporin Z|Aquaporin-like|Major intrinsic protein|Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0006833|GO:0015250|GO:0016020|GO:0016021|GO:0055085 G3DSA:1.20.1080.10|MF_01146|PF00230|PR00783|PS00221|SSF81338|TIGR00861 BKD09_RS10375 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003135|IPR005875|IPR011054|IPR013815|IPR013816|IPR016185 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type|ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Phosphoribosylaminoimidazole carboxylase, ATPase subunit|Pre-ATP-grasp domain|Rudiment single hybrid motif GO:0003824|GO:0004638|GO:0005524|GO:0006189 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|MF_01928|PF02222|SSF51246|SSF52440|SSF56059|TIGR01161 BKD09_RS10380 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000031|IPR024694 PurE domain|PurE, prokaryotic type GO:0006189 G3DSA:3.40.50.7700|MF_01929|PF00731|PIRSF001338|SM01001|SSF52255|TIGR01162 BKD09_RS10385 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000160|IPR029787 GGDEF domain|Nucleotide cyclase G3DSA:3.30.70.270|PF00990|SM00267|SSF55073|TIGR00254 BKD09_RS10400 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007420 Protein of unknown function DUF465 PF04325 BKD09_RS10405 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007420 Protein of unknown function DUF465 PF04325 BKD09_RS10410 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006076|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01266|SSF51905 BKD09_RS10415 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR000160|IPR001610|IPR001633|IPR013656|IPR029787 EAL domain|GGDEF domain|Nucleotide cyclase|PAC motif|PAS domain|PAS fold-4 G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00563|PF00990|PF08448|PF12860|SM00052|SM00086|SM00091|SM00267|SSF141868|SSF55073|SSF55785|TIGR00229|TIGR00254 BKD09_RS10420 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000447|IPR006076|IPR023753|IPR031656 Alpha-glycerophosphate oxidase, C-terminal|FAD dependent oxidoreductase|FAD-dependent glycerol-3-phosphate dehydrogenase|FAD/NAD(P)-binding domain GO:0004368|GO:0006072|GO:0009331|GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01266|PF16901|PR01001|SSF51905 BKD09_RS10425 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR005893|IPR008995|IPR013611|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Spermidine/putrescine ABC transporter, ATP-binding subunit|Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0015417|GO:0015846|GO:0016820|GO:0016887|GO:0043190 G3DSA:3.40.50.300|PF00005|PF08402|PS00211|SM00382|SSF50331|SSF52540|TIGR01187 BKD09_RS10430 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS10435 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS10450 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS10455 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS10460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.40.190.10|PF13416|SSF53850 BKD09_RS10465 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032774 WG containing repeat PF14903|SSF69360 BKD09_RS10470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007844|IPR032712 AsmA|AsmA-like, C-terminal PF05170|PF13502 BKD09_RS10475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004165|IPR012792 3-oxoacid CoA-transferase, subunit A|Coenzyme A transferase family I GO:0008152|GO:0008410 G3DSA:3.40.1080.10|PF01144|SM00882|SSF100950|TIGR02429 BKD09_RS10480 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004165|IPR012791 3-oxoacid CoA-transferase, subunit B|Coenzyme A transferase family I GO:0008152|GO:0008410 G3DSA:3.40.810.20|PF01144|SM00882|SSF100950|TIGR02428 BKD09_RS10485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 BKD09_RS10490 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005532|IPR016187 C-type lectin fold|Sulfatase-modifying factor enzyme G3DSA:3.90.1580.10|PF03781|SSF56436 BKD09_RS10495 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001117|IPR001287|IPR008972|IPR011707 Cupredoxin|Multicopper oxidase, type 1|Multicopper oxidase, type 3|Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0016491|GO:0050421|GO:0055114 G3DSA:2.60.40.420|PF00394|PF07732|PR00695|SSF49503|TIGR02376 BKD09_RS10505 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004558|IPR006638|IPR007197|IPR010723|IPR023404 Coproporphyrinogen III oxidase, oxygen-independent, HemN|Elongator protein 3/MiaB/NifB|HemN, C-terminal|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0004109|GO:0005737|GO:0006779|GO:0051536|GO:0055114 G3DSA:3.80.30.20|PF04055|PF06969|PIRSF000167|SM00729|SSF102114|TIGR00538 BKD09_RS10510 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015077|IPR023883 Conserved hypothetical protein CHP03980, redox-disulphide|Domain of unknown function DUF1858 PF08984|SSF140683|TIGR03980 BKD09_RS10515 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|PR00034|SM00100|SM00419|SSF46785|SSF51206 BKD09_RS10520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010266 NnrS PF05940 BKD09_RS10525 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR011991|IPR018060|IPR032687 DNA binding HTH domain, AraC-type|HTH-type transcriptional regulator AraC-type, N-terminal|Homeodomain-like|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:1.10.10.60|PF12625|PF12833|SM00342|SSF46689 BKD09_RS10530 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|SM00421|SM00448|SSF46894|SSF52172 BKD09_RS10535 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011935|IPR025554 Conserved hypothetical protein CHP02231|Domain of unknown function DUF4140 PF13598|PF13600|TIGR02231 BKD09_RS10540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|SM00382|SSF52540 BKD09_RS10545 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000522|IPR029022 ABC transporter, BtuC-like|ABC transporter, FecCD-like GO:0005215|GO:0016020 G3DSA:1.10.3470.10|PF01032|SSF81345 BKD09_RS10550 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002491 ABC transporter periplasmic binding domain GO:0005488 G3DSA:3.40.50.1980|PF01497|SSF53807 BKD09_RS10555 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019600 Hemin uptake protein HemP G3DSA:2.10.70.10|PF10636 BKD09_RS10560 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000531|IPR010949|IPR011276|IPR012910 TonB-dependent haem/haemoglobin receptor|TonB-dependent haemoglobin/transferrin/lactoferrin receptor|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0005215|GO:0006810|GO:0016020|GO:0019867 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|SSF56935|TIGR01785|TIGR01786 BKD09_RS10565 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007138|IPR011008 Antibiotic biosynthesis monooxygenase domain|Dimeric alpha-beta barrel G3DSA:3.30.70.900|PF03992|SSF54909 BKD09_RS10570 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010413 Heme utilization carrier protein HutX-like G3DSA:3.40.1570.10|PF06228|PIRSF030840|SSF144064|TIGR04108 BKD09_RS10575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002898|IPR014164 MotA/TolQ/ExbB proton channel|TonB-system energizer ExbB type-1 GO:0006810|GO:0008565|GO:0016020 PF01618|TIGR02797 BKD09_RS10580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003400|IPR014170 Biopolymer transport protein ExbD/TolR|TonB system transport protein ExbD type-1 GO:0005215|GO:0006810|GO:0016020 PF02472|TIGR02803 BKD09_RS10585 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006260 TonB, C-terminal GO:0006810 G3DSA:3.30.1150.10|PF13103|SSF74653|TIGR01352 BKD09_RS10590 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027372 Phytase-like domain PF13449 BKD09_RS10595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|SM00849|SSF56281 BKD09_RS10600 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS10605 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS10610 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.40.190.10|PF13416|SSF53850 BKD09_RS10615 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006139|IPR006140|IPR016040 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF00389|PF02826|SSF51735|SSF52283 BKD09_RS10620 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003660|IPR004089|IPR033480 HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain|Single Cache domain 2 GO:0004871|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|G3DSA:3.30.450.20|PF00015|PF00672|PF17200|SM00283|SM00304|SM01049|SSF58104 BKD09_RS10625 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 BKD09_RS10630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 BKD09_RS10635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010753|IPR011008 Dimeric alpha-beta barrel|Domain of unknown function DUF1330 G3DSA:3.30.70.900|PF07045|SSF54909 BKD09_RS10640 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 BKD09_RS10645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001114|IPR018220|IPR027417|IPR033128 Adenylosuccinate synthase, active site|Adenylosuccinate synthase, GTP-binding site|Adenylosuccinate synthetase|P-loop containing nucleoside triphosphate hydrolase GO:0004019|GO:0005525|GO:0006164 G3DSA:1.10.300.10|G3DSA:3.40.440.10|G3DSA:3.90.170.10|MF_00011|PF00709|PS00513|PS01266|SM00788|SSF52540|TIGR00184 BKD09_RS10675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025187 Protein of unknown function DUF4112 PF13430 BKD09_RS10685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021738 Protein of unknown function DUF3309 PF11752 BKD09_RS10690 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002579|IPR011057 Mss4-like|Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 G3DSA:2.170.150.20|MF_01400|PF01641|SSF51316|TIGR00357 BKD09_RS10695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 G3DSA:3.30.1060.10|MF_01401|PF01625|SSF55068|TIGR00401 BKD09_RS10700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011990|IPR019734|IPR029030 Caspase-like domain|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|G3DSA:3.40.50.1460|PF00656|PF13414|PF13432|SM00028|SSF48452|SSF52129 BKD09_RS10705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027417|IPR027785 P-loop containing nucleoside triphosphate hydrolase|UvrD-like helicase C-terminal domain G3DSA:3.40.50.300|PF13538|PF13604|SSF52540 BKD09_RS10710 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005126|IPR011031|IPR011885|IPR024717 Denitrification system component NapC/NirT/NrfH|Multihaem cytochrome|NapC/NirT cytochrome c, N-terminal|Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 G3DSA:1.10.3820.10|PF03264|PIRSF000013|SSF48695|TIGR02161 BKD09_RS10715 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005591|IPR011031|IPR027406 Multihaem cytochrome|Nitrate reductase cytochrome c-type subunit NapB|Periplasmic nitrate reductase NapB subunit, heme binding domain G3DSA:4.10.1020.10|PF03892|PIRSF006105|SSF48695 BKD09_RS10720 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006656|IPR006657|IPR006963|IPR009010|IPR010051|IPR027467 Aspartate decarboxylase-like domain|Molybdopterin dinucleotide-binding domain|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, 4Fe-4S domain|Molybdopterin oxidoreductase, molybdopterin cofactor binding site|Periplasmic nitrate reductase, large subunit GO:0008940|GO:0016491|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 G3DSA:2.20.25.90|G3DSA:2.40.40.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|MF_01630|PF00384|PF01568|PF04879|PS00551|SM00926|SSF50692|SSF53706|TIGR01706 BKD09_RS10725 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005623 Chaperone NapD, nitrate reductase assembly PF03927 BKD09_RS10730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004448|IPR010649 Nitrate reductas, NapE, periplasmic|Nitrate/trimethylamine N-oxide reductase NapE/TorE PF06796|TIGR02973 BKD09_RS10735 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002931|IPR013589 Bacterial transglutaminase-like, N-terminal|Transglutaminase-like G3DSA:3.90.260.10|PF01841|PF08379|SM00460|SSF54001 BKD09_RS10745 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001898|IPR031312 Sodium/sulphate symporter|Sodium/sulphate symporter, conserved site GO:0005215|GO:0006814|GO:0016020|GO:0055085 PF00939|PS01271 BKD09_RS10750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR016981|IPR018060|IPR018062 DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Transcription regulator, AraC, predicted GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PIRSF031684|PS00041|SM00342|SSF46689 BKD09_RS10755 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002656 Acyltransferase 3 GO:0016747 PF01757 BKD09_RS10760 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011251 Luciferase-like domain GO:0016705|GO:0055114 G3DSA:3.20.20.30|PF00296|SSF51679 BKD09_RS10765 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00196|SM00421|SSF46894 BKD09_RS10775 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001375|IPR029058 Alpha/Beta hydrolase fold|Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 G3DSA:3.40.50.1820|PF00326|SSF53474 BKD09_RS10780 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005490 L,D-transpeptidase catalytic domain GO:0016740 G3DSA:2.40.440.10|PF03734|SSF141523 BKD09_RS10790 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001128|IPR002397|IPR017972 Cytochrome P450|Cytochrome P450, B-class|Cytochrome P450, conserved site GO:0005506|GO:0016705|GO:0020037|GO:0055114 G3DSA:1.10.630.10|PF00067|PR00359|PS00086|SSF48264 BKD09_RS10800 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001638|IPR010067|IPR015168|IPR019546 Aliphatic sulfonates-binding protein|Solute-binding protein family 3/N-terminal domain of MltF|SsuA/THI5-like|Twin-arginine translocation pathway, signal sequence, bacterial/archaeal GO:0006790|GO:0006810|GO:0016020 G3DSA:3.40.190.10|PF09084|SM00062|SSF53850|TIGR01409|TIGR01728 BKD09_RS10805 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001638|IPR010067|IPR015168 Aliphatic sulfonates-binding protein|Solute-binding protein family 3/N-terminal domain of MltF|SsuA/THI5-like GO:0006790|GO:0006810|GO:0016020 G3DSA:3.40.190.10|PF09084|SM00062|SSF53850|TIGR01728 BKD09_RS10810 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011251|IPR019911 Alkanesulphonate monooxygenase, FMN-dependent|Luciferase-like domain GO:0008726|GO:0016705|GO:0055114 G3DSA:3.20.20.30|MF_01229|PF00296|SSF51679|TIGR03565 BKD09_RS10815 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS10820 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS10825 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002563|IPR012349 FMN-binding split barrel|Flavin reductase like domain GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF01613|SM00903|SSF50475 BKD09_RS10830 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001261|IPR002933|IPR011650|IPR017150 ArgE/DapE/ACY1/CPG2/YscS, conserved site|Peptidase M20|Peptidase M20, dimerisation domain|Peptidase M20, glutamate carboxypeptidase GO:0006508|GO:0008152|GO:0008237|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PIRSF037238|PS00758|SSF53187|SSF55031 BKD09_RS10840 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR011006|IPR025662|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PR01590|PS00675|SM00382|SM00448|SSF46689|SSF52172|SSF52540 BKD09_RS10845 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001172|IPR001543|IPR012826 Flagellar motor switch FliN|Flagellar motor switch FliN/Type III secretion HrcQb|Surface presentation of antigen (SpoA) GO:0003774|GO:0006935|GO:0009288|GO:0009425|GO:0016020|GO:0071973 G3DSA:2.30.330.10|PF01052|PR00956|SSF101801|TIGR02480 BKD09_RS10850 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE PF02108 BKD09_RS10855 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000090|IPR011002|IPR023087|IPR028263|IPR032779 Flagellar motor switch protein FliG|Flagellar motor switch protein FliG, C-terminal|Flagellar motor switch protein FliG, N-terminal domain|Flagellar motor switch protein FliG, alpha-helical|Flagellar motor switch protein FliG, middle domain GO:0003774|GO:0006935|GO:0009288|GO:0071973 G3DSA:1.10.220.30|PF01706|PF14841|PF14842|PIRSF003161|PR00954|SSF48029|TIGR00207 BKD09_RS10860 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000067|IPR006182|IPR013556 Flagellar M-ring C-terminal|Flagellar M-ring protein FliF|Secretory protein YscJ/FliF GO:0003774|GO:0009431|GO:0071973 PF01514|PF08345|PIRSF004862|PR01009|TIGR00206 BKD09_RS10865 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009534|IPR010921|IPR011991 Protein of unknown function DUF1153|Trp repressor/replication initiator|Winged helix-turn-helix DNA-binding domain GO:0043565 G3DSA:1.10.10.10|PF06627|SSF48295 BKD09_RS10870 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005648|IPR025963|IPR025965 Flagellar hook capping protein|FlgD Ig-like domain|FlgD Tudor-like domain PF03963|PF13860|PF13861 BKD09_RS10875 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021136 Flagellar hook-length control protein-like, C-terminal PF02120 BKD09_RS10880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004506|IPR014729|IPR023382 Adenine nucleotide alpha hydrolase-like domains|Rossmann-like alpha/beta/alpha sandwich fold|tRNA-specific 2-thiouridylase GO:0008033|GO:0016740|GO:0016783 G3DSA:2.30.30.280|G3DSA:2.40.30.10|G3DSA:3.40.50.620|MF_00144|PF03054|SSF52402|TIGR00420 BKD09_RS10885 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|SSF53335 BKD09_RS10900 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|SSF56349 BKD09_RS10910 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003313|IPR009057|IPR018060|IPR020449 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|Homeodomain-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PF14525|PR00032|SM00342|SSF46689 BKD09_RS10915 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|SSF53335 BKD09_RS10920 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012413 BA14k family GO:0009405 PF07886 BKD09_RS10925 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003738 SOS response associated peptidase (SRAP) SSF143081 BKD09_RS10930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003313|IPR009057|IPR018060|IPR018062|IPR020449 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PF14525|PR00032|PS00041|SM00342|SSF46689 BKD09_RS10940 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014550 Uncharacterised conserved protein UCP028704, OpgC PF10129|PIRSF028704 BKD09_RS10950 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 G3DSA:3.30.1490.70|G3DSA:3.30.470.30|PF01068|SSF56091 BKD09_RS10960 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008490 Transposase InsH, N-terminal PF05598 BKD09_RS10965 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011040|IPR015943 Sialidases|WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.130.10.10|G3DSA:2.130.10.140|SSF110296|SSF50939 BKD09_RS10970 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025336 Protein of unknown function DUF4242 PF14026 BKD09_RS10975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR001660|IPR011990|IPR013761|IPR027417|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|Nucleotide cyclase|P-loop containing nucleoside triphosphate hydrolase|Sterile alpha motif domain|Sterile alpha motif/pointed domain|Tetratricopeptide-like helical domain GO:0005515|GO:0009190|GO:0016849|GO:0035556 G3DSA:1.10.150.50|G3DSA:1.25.40.10|G3DSA:3.30.70.1230|G3DSA:3.40.50.300|PF00211|PF00536|PF13191|SM00044|SM00454|SSF47769|SSF48452|SSF52540|SSF55073 BKD09_RS10980 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SSF52172 BKD09_RS10990 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001096|IPR029030 Caspase-like domain|Peptidase C13, legumain GO:0006508|GO:0008233 PF01650|SSF52129 BKD09_RS10995 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009959|IPR032710 NTF2-like domain|Polyketide cyclase SnoaL-like domain G3DSA:3.10.450.50|PF12680|SSF54427 BKD09_RS11000 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014825 DNA alkylation repair enzyme PF08713 BKD09_RS11005 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS11010 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005000|IPR011206|IPR015813 Citrate lyase beta subunit-like|HpcH/HpaI aldolase/citrate lyase domain|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 G3DSA:3.20.20.60|PF03328|PIRSF015582|SSF51621 BKD09_RS11015 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|SSF89796 BKD09_RS11020 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002509|IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF01522|SSF88713 BKD09_RS11025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|PF00857|SSF52499 BKD09_RS11030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS11035 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS11040 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS11045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|SM00382|SSF52540 BKD09_RS11050 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR027417|IPR032823 ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|SSF52540 BKD09_RS11055 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00081|SSF51735 BKD09_RS11065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010941|IPR010963|IPR029058 Alpha/Beta hydrolase fold|Poly(R)-hydroxyalkanoic acid synthase, class I|Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0005737|GO:0016746|GO:0042619 G3DSA:3.40.50.1820|PF07167|SSF53474|TIGR01838 BKD09_RS11075 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005829|IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain|Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PS00217|SSF103473 BKD09_RS11080 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021259 Protein of unknown function DUF2817 G3DSA:3.40.630.10|PF10994|SSF53187 BKD09_RS11085 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011697|IPR029062 Class I glutamine amidotransferase-like|Peptidase C26 GO:0006541|GO:0016787 G3DSA:3.40.50.880|PF07722|SSF52317 BKD09_RS11090 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS11095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003738 SOS response associated peptidase (SRAP) G3DSA:3.90.1680.10|PF02586|SSF143081 BKD09_RS11110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006164|IPR009187|IPR016194 Ku70/Ku80 beta-barrel domain|Non-homologous end joining protein Ku, prokaryotic type|SPOC-like, C-terminal domain GO:0003677|GO:0006303 G3DSA:2.40.290.10|MF_01875|PF02735|PIRSF006493|SM00559|SSF100939|TIGR02772 BKD09_RS11120 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001867|IPR002182|IPR011990|IPR011991|IPR016032|IPR027417 NB-ARC|OmpR/PhoB-type DNA-binding domain|P-loop containing nucleoside triphosphate hydrolase|Signal transduction response regulator, C-terminal effector|Tetratricopeptide-like helical domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0005515|GO:0006355|GO:0043531 G3DSA:1.10.10.10|G3DSA:1.25.40.10|G3DSA:3.40.50.300|PF00486|PF00931|SM00862|SSF46894|SSF48452|SSF52540 BKD09_RS11125 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS11130 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR018060|IPR018062|IPR020449 DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PR00032|PS00041|SM00342|SSF46689 BKD09_RS11135 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR018060 DNA binding HTH domain, AraC-type|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|SM00342|SSF46689 BKD09_RS11140 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR000639|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Epoxide hydrolase-like GO:0003824 G3DSA:3.40.50.1820|PF00561|PR00111|PR00412|SSF53474 BKD09_RS11150 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006674 HD domain G3DSA:1.10.3210.10|PF01966|SSF109604 BKD09_RS11155 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS11160 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000572|IPR005066|IPR008335|IPR014756|IPR030835 Eukaryotic molybdopterin oxidoreductase|Immunoglobulin E-set|Moybdenum cofactor oxidoreductase, dimerisation|Oxidoreductase, molybdopterin-binding domain|Sulfite dehydrogenase SoxC GO:0016491|GO:0030151|GO:0042128|GO:0055114 G3DSA:2.60.40.650|G3DSA:3.90.420.10|PF00174|PF03404|PR00407|SSF56524|SSF81296|TIGR04555 BKD09_RS11165 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|SSF46626 BKD09_RS11170 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005180 Domain of unknown function DUF302 G3DSA:3.30.310.70|PF03625|SSF103247 BKD09_RS11175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001867|IPR002182|IPR011990|IPR011991|IPR016032|IPR027417 NB-ARC|OmpR/PhoB-type DNA-binding domain|P-loop containing nucleoside triphosphate hydrolase|Signal transduction response regulator, C-terminal effector|Tetratricopeptide-like helical domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0005515|GO:0006355|GO:0043531 G3DSA:1.10.10.10|G3DSA:1.25.40.10|G3DSA:3.40.50.300|PF00486|PF00931|SM00862|SSF46894|SSF48452|SSF52540 BKD09_RS11180 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003594|IPR011495 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain G3DSA:3.30.565.10|PF07568|SSF55874 BKD09_RS11195 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027056 Gluconate 2-dehydrogenase subunit 3 PF13618 BKD09_RS11200 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000172|IPR007867|IPR023753 FAD/NAD(P)-binding domain|Glucose-methanol-choline oxidoreductase, C-terminal|Glucose-methanol-choline oxidoreductase, N-terminal GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.50.50.60|PF00732|PF05199|SSF51905 BKD09_RS11205 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009056|IPR014353 Cytochrome c-like domain|Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0009055|GO:0016020|GO:0016614|GO:0020037 G3DSA:1.10.760.10|PF00034|PF13442|PIRSF000018|SSF46626 BKD09_RS11215 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001343|IPR010255|IPR011049|IPR018511|IPR019791 Haem peroxidase|Haem peroxidase, animal|Haemolysin-type calcium-binding repeat|Hemolysin-type calcium-binding conserved site|Serralysin-like metalloprotease, C-terminal GO:0004601|GO:0005509|GO:0006979|GO:0020037|GO:0055114 G3DSA:1.10.640.10|G3DSA:2.150.10.10|PF00353|PF03098|PR00313|PS00330|SSF48113|SSF51120 BKD09_RS11220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR010128|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|ATPase, type I secretion system, PrtD|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0008565|GO:0016021|GO:0016887|GO:0030253|GO:0030256|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|SM00382|SSF52540|SSF90123|TIGR01842 BKD09_RS11225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001343|IPR003995|IPR011049|IPR018511 Haemolysin-type calcium-binding repeat|Hemolysin-type calcium-binding conserved site|RTX toxin determinant A|Serralysin-like metalloprotease, C-terminal GO:0005509|GO:0005576|GO:0009405 G3DSA:2.150.10.10|PF00353|PR00313|PR01488|PS00330|SSF51120 BKD09_RS11230 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003997|IPR010129 RTX secretion protein D, Gram-negative bacteria|Type I secretion membrane fusion protein, HlyD family GO:0009306|GO:0015031|GO:0016020|GO:0016021 G3DSA:2.40.50.100|PF13437|PF13533|PR01490|SSF111369|TIGR01843 BKD09_RS11235 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|SM00421|SM00448|SSF46894|SSF52172 BKD09_RS11250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009959|IPR023753|IPR032710 FAD/NAD(P)-binding domain|NTF2-like domain|Polyketide cyclase SnoaL-like domain GO:0016491|GO:0055114 G3DSA:3.10.450.50|G3DSA:3.50.50.60|PF12680|PF13738|PR00411|SSF51905|SSF54427 BKD09_RS11275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR001789|IPR003594|IPR003660|IPR003661|IPR004358|IPR011006|IPR013656|IPR029151|IPR033479 CheY-like superfamily|Double Cache domain 1|HAMP domain|Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold-4|Periplasmic sensor domain-like|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF00672|PF02518|PF02743|PF08448|PR00344|SM00304|SM00387|SM00388|SM00448|SSF103190|SSF158472|SSF47384|SSF52172|SSF55785|SSF55874 BKD09_RS11285 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 G3DSA:3.40.190.10|PF01547|SSF53850 BKD09_RS11290 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|G3DSA:1.20.58.370|PF00528|SSF160964|SSF161098 BKD09_RS11295 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS11305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR008995|IPR012340|IPR013611|IPR027417 AAA+ ATPase domain|ABC transporter-like|Molybdate/tungstate binding, C-terminal|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0016887|GO:0043190 G3DSA:2.40.50.100|G3DSA:2.40.50.140|G3DSA:3.40.50.300|PF00005|PF08402|SM00382|SSF50331|SSF52540 BKD09_RS11310 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR008995|IPR012340|IPR013611|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0016887|GO:0043190 G3DSA:2.40.50.140|G3DSA:3.40.50.300|PF00005|PF08402|PS00211|SM00382|SSF50331|SSF52540 BKD09_RS11315 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004007|IPR012737 DhaL domain|Dihydroxyacetone kinase, subunit L GO:0004371|GO:0006071|GO:0016772 PF02734|SM01120|SSF101473|TIGR02365 BKD09_RS11320 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004701|IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain|Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 G3DSA:3.40.50.510|PF03610|SSF53062|TIGR02364 BKD09_RS11325 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000032|IPR001020 Phosphocarrier protein HPr-like|Phosphotransferase system, HPr histidine phosphorylation site G3DSA:3.30.1340.10|PF00381|PR00107|PS00369|SSF55594|TIGR01003 BKD09_RS11330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000121|IPR006318|IPR008279|IPR008731|IPR015813|IPR024692 PEP-utilising enzyme, C-terminal|PEP-utilising enzyme, mobile domain|Phosphotransferase system, enzyme I|Phosphotransferase system, enzyme I N-terminal|Phosphotransferase system, enzyme I-like|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0008965|GO:0009401|GO:0016310|GO:0016772 G3DSA:1.10.274.10|G3DSA:3.20.20.60|G3DSA:3.50.30.10|PF00391|PF02896|PF05524|PIRSF000732|PR01736|SSF47831|SSF51621|SSF52009|TIGR01417 BKD09_RS11340 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004006|IPR012736 DhaK domain|Dihydroxyacetone kinase DhaK, subunit 1 GO:0004371|GO:0006071 G3DSA:3.30.1180.20|G3DSA:3.40.50.10440|PF02733|SSF82549|TIGR02363 BKD09_RS11345 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009200 Protein of unknown function DUF1269, membrane associated PF06897 BKD09_RS11365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001867|IPR011990|IPR011991|IPR016032|IPR019734 OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Tetratricopeptide repeat|Tetratricopeptide-like helical domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0005515|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.25.40.10|PF00486|PF13181|SM00862|SSF46894|SSF48452 BKD09_RS11375 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002035|IPR010607 Protein of unknown function DUF1194|von Willebrand factor, type A G3DSA:3.40.50.410|PF06707|SSF53300 BKD09_RS11385 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001303 Class II aldolase/adducin N-terminal G3DSA:3.40.225.10|PF00596|SM01007|SSF53639 BKD09_RS11390 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.30.420.40|SSF53067 BKD09_RS11395 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS11400 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS11405 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS11410 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025997|IPR028082 Periplasmic binding protein|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13407|SSF53822 BKD09_RS11420 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009839 SseB protein N-terminal domain PF07179 BKD09_RS11425 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR002078|IPR002197|IPR003018|IPR003593|IPR009057|IPR025662|IPR025943|IPR027417 AAA+ ATPase domain|DNA binding HTH domain, Fis-type|GAF domain|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|PAS domain|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2 GO:0003677|GO:0005515|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.30.450.20|G3DSA:3.40.50.300|PF00158|PF01590|PF02954|PS00675|PS00676|SM00091|SM00382|SSF46689|SSF52540 BKD09_RS11430 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002328|IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|Alcohol dehydrogenase, zinc-type, conserved site|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PS00059|SM00829|SSF50129|SSF51735 BKD09_RS11445 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003430|IPR009078|IPR012348 Ferritin-like superfamily|Methane/phenol/toluene hydroxylase|Ribonucleotide reductase-related GO:0006725|GO:0016491|GO:0055114 G3DSA:1.10.620.20|PF02332|SSF47240 BKD09_RS11450 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001041|IPR001221|IPR001433|IPR006058|IPR008333|IPR012675|IPR017938 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Phenol hydroxylase reductase|Riboflavin synthase-like beta-barrel GO:0009055|GO:0016491|GO:0051536|GO:0051537|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.10.20.30|G3DSA:3.40.50.80|PF00111|PF00175|PF00970|PR00410|PS00197|SSF52343|SSF54292|SSF63380 BKD09_RS11455 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003430|IPR009078|IPR012078|IPR012348 Ferritin-like superfamily|Methane/phenol monooxygenase, hydroxylase component|Methane/phenol/toluene hydroxylase|Ribonucleotide reductase-related GO:0006725|GO:0016491|GO:0016709|GO:0055114 G3DSA:1.10.620.20|PF02332|PIRSF000040|SSF47240 BKD09_RS11460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003454 Monooxygenase component MmoB/DmpM GO:0004497|GO:0006725 G3DSA:3.90.56.10|PF02406|SSF56029 BKD09_RS11465 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006680|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase GO:0016787 G3DSA:3.20.20.140|PF04909|SSF51556 BKD09_RS11470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002744 Domain of unknown function DUF59 PF01883|SSF117916 BKD09_RS11475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001844|IPR002423|IPR018370|IPR027409|IPR027410|IPR027413 Chaperonin Cpn60|Chaperonin Cpn60, conserved site|Chaperonin Cpn60/TCP-1 family|GroEL-like apical domain|GroEL-like equatorial domain|TCP-1-like chaperonin intermediate domain GO:0005524|GO:0005737|GO:0006457|GO:0042026 G3DSA:1.10.560.10|G3DSA:3.30.260.10|G3DSA:3.50.7.10|PF00118|PR00298|PS00296|SSF48592|SSF52029|SSF54849 BKD09_RS11480 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002078|IPR002197|IPR003018|IPR003593|IPR009057|IPR025662|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|DNA binding HTH domain, Fis-type|GAF domain|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site GO:0003677|GO:0005515|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00158|PF01590|PF02954|PS00675|PS00676|PS00688|SM00382|SSF46689|SSF52540 BKD09_RS11490 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:2.40.50.100|PF13437|PF13533|SSF111369 BKD09_RS11495 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic PF12698 BKD09_RS11500 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain G3DSA:2.40.50.100|PF16576|SSF111369 BKD09_RS11510 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005180 Domain of unknown function DUF302 G3DSA:3.30.310.70|PF03625|SSF103247 BKD09_RS11515 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|SSF46626 BKD09_RS11520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000572|IPR005066|IPR008335|IPR014756|IPR030835 Eukaryotic molybdopterin oxidoreductase|Immunoglobulin E-set|Moybdenum cofactor oxidoreductase, dimerisation|Oxidoreductase, molybdopterin-binding domain|Sulfite dehydrogenase SoxC GO:0016491|GO:0030151|GO:0042128|GO:0055114 G3DSA:2.60.40.650|G3DSA:3.90.420.10|PF00174|PF03404|PR00407|SSF56524|SSF81296|TIGR04555 BKD09_RS11525 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003313|IPR009057|IPR018060|IPR032783 AraC-type arabinose-binding/dimerisation domain|AraC-type transcription regulator, ligand-binding domain|DNA binding HTH domain, AraC-type|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:2.60.120.280|PF12833|PF12852|SM00342|SSF46689|SSF51215 BKD09_RS11530 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|SSF53850 BKD09_RS11545 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PR00455|SSF46689|SSF48498 BKD09_RS11550 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|PIRSF006603|TIGR00797 BKD09_RS11560 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004872 Lipoprotein NlpA family G3DSA:3.40.190.10|PF03180|PIRSF002854|SSF53850|TIGR00363 BKD09_RS11565 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011251|IPR024003 Luciferase-like domain|Putative luciferase-like monooxygenase, KPN01858 GO:0016705|GO:0055114 G3DSA:3.20.20.30|PF00296|SSF51679|TIGR04027 BKD09_RS11570 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023982|IPR029032 AhpD-like|Conserved hypothetical protein CHP04029, CMD-like G3DSA:1.20.1290.10|SSF69118|TIGR04029 BKD09_RS11575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003779|IPR004675|IPR010195|IPR023923|IPR029032 AhpD-like|Alkylhydroperoxidase AhpD core|Alkylhydroperoxidase domain-containing protein, Avi7169|Carboxymuconolactone decarboxylase-like|Uncharacterised peroxidase-related GO:0051920|GO:0055114 G3DSA:1.20.1290.10|PF02627|SSF69118|TIGR00778|TIGR01926|TIGR04030 BKD09_RS11580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000709|IPR028081|IPR028082 Leu/Ile/Val-binding protein|Leucine-binding protein domain|Periplasmic binding protein-like I GO:0006865 G3DSA:3.40.50.2300|PF13458|PR00337|SSF53822 BKD09_RS11585 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS11590 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|SM00382|SSF52540 BKD09_RS11595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS11600 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004688|IPR011541 Nickel/cobalt transporter, high-affinity|Transition metal uptake transporter nickel/cobalt GO:0015099|GO:0016021|GO:0035444|GO:0046872 PF03824|TIGR00802 BKD09_RS11605 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|SSF56935 BKD09_RS11610 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002789|IPR014588|IPR027417 ATPase, Atu1862 type, predicted|Helicase HerA, central domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF01935|PIRSF034081|SSF52540 BKD09_RS11615 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011991 Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10 BKD09_RS11620 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016040 NAD(P)-binding domain G3DSA:3.40.50.720 BKD09_RS11625 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000835|IPR011991|IPR023187 MarR-type HTH domain|Transcriptional regulator MarR-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PS01117|SM00347|SSF46785 BKD09_RS11630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000194|IPR003593|IPR005714|IPR020003|IPR022426|IPR027417 AAA+ ATPase domain|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|ATPase, type III secretion system, FliI/YscN|Flagellum-specific ATP synthase FliI, clade 3|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0005737|GO:0009058|GO:0009288|GO:0016887|GO:0030254|GO:0030257|GO:0044781 G3DSA:3.40.50.300|PF00006|PS00152|SM00382|SSF52540|TIGR01026|TIGR03498 BKD09_RS11635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001444|IPR010930|IPR012836|IPR019776|IPR020013 Fagellar hook-basal body protein, FlgE/F/G|Flagellar basal body rod protein, N-terminal|Flagellar basal body rod protein, conserved site|Flagellar basal-body rod FlgF|Flagellar basal-body/hook protein, C-terminal domain GO:0030694|GO:0071973 PF00460|PF06429|PS00588|SSF117143|TIGR02490|TIGR03506 BKD09_RS11640 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010626|IPR023157 AGR-C-984p-like domain|Protein of unknown function DUF1217 G3DSA:1.10.3700.10|PF06748|SSF158837 BKD09_RS11645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000540|IPR002898|IPR022522 Flagellar motor protein MotA, conserved site|Flagellar motor stator, MotA|MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PF01618|PS01307|TIGR03818 BKD09_RS11650 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001543|IPR001689|IPR028976 CheC-like domain|Flagellar motor switch protein FliM|Surface presentation of antigen (SpoA) GO:0003774|GO:0009425|GO:0071973 G3DSA:2.30.330.10|PF01052|PF02154|SSF101801|SSF103039 BKD09_RS11660 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001172|IPR001543|IPR012826 Flagellar motor switch FliN|Flagellar motor switch FliN/Type III secretion HrcQb|Surface presentation of antigen (SpoA) GO:0003774|GO:0006935|GO:0009288|GO:0009425|GO:0016020|GO:0071973 G3DSA:2.30.330.10|PF01052|PR00956|SSF101801|TIGR02480 BKD09_RS11665 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000090|IPR011002|IPR023087|IPR028263|IPR032779 Flagellar motor switch protein FliG|Flagellar motor switch protein FliG, C-terminal|Flagellar motor switch protein FliG, N-terminal domain|Flagellar motor switch protein FliG, alpha-helical|Flagellar motor switch protein FliG, middle domain GO:0003774|GO:0006935|GO:0009288|GO:0071973 G3DSA:1.10.220.30|PF01706|PF14841|PF14842|PR00954|SSF48029 BKD09_RS11670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006135|IPR006136|IPR029025 Flagellar biosynthetic protein FlhB|Type III secretion system substrate exporter|Type III secretion system substrate exporter, C-terminal GO:0009306|GO:0015031|GO:0016020|GO:0016021|GO:0044780 G3DSA:3.40.1690.10|PF01312|PR00950|SSF160544|TIGR00328 BKD09_RS11675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001444|IPR006300 Flagellar basal body rod protein, N-terminal|Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 PF00460|PIRSF002889 BKD09_RS11680 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001444|IPR006299|IPR010930 Flagellar basal body rod protein, N-terminal|Flagellar basal-body rod protein FlgC|Flagellar basal-body/hook protein, C-terminal domain GO:0030694|GO:0071973 PF00460|PF06429|TIGR01395 BKD09_RS11685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 MF_00724|PF02049 BKD09_RS11690 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001444|IPR010930|IPR012834|IPR019776|IPR020013 Fagellar hook-basal body protein, FlgE/F/G|Flagellar basal body rod protein, N-terminal|Flagellar basal body rod protein, conserved site|Flagellar basal-body rod FlgG|Flagellar basal-body/hook protein, C-terminal domain GO:0009426|GO:0071973 PF00460|PF06429|PS00588|SSF117143|TIGR02488|TIGR03506 BKD09_RS11695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013974|IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal|SAF domain PF13144|SM00858|TIGR03170 BKD09_RS11700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 MF_00416|PF02119|PR01010 BKD09_RS11705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:1.25.60.10|SSF158791 BKD09_RS11710 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 MF_00415|PF02107|PR01008 BKD09_RS11715 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 PF03748 BKD09_RS11720 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005837|IPR005838 Flagellar transport protein FliP|Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PF00813|PR00951|PR01302|PS01061|TIGR01103 BKD09_RS11725 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 G3DSA:1.20.1330.10|PF00669|PF00700|SSF64518 BKD09_RS11730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 G3DSA:1.20.1330.10|PF00669|PF00700|SSF64518 BKD09_RS11735 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 G3DSA:1.20.1330.10|PF00669|PF00700|SSF64518 BKD09_RS11740 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000067|IPR006182|IPR013556 Flagellar M-ring C-terminal|Flagellar M-ring protein FliF|Secretory protein YscJ/FliF GO:0003774|GO:0009431|GO:0071973 PF01514|PF08345|PIRSF004862|PR01009|TIGR00206 BKD09_RS11750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006665|IPR025713 Motility protein B, N-terminal domain|OmpA-like domain G3DSA:3.30.1330.60|PF00691|PF13677|SSF103088 BKD09_RS11760 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021136 Flagellar hook-length control protein-like, C-terminal PF02120 BKD09_RS11765 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008258|IPR023346 Lysozyme-like domain|Transglycosylase SLT domain 1 G3DSA:1.10.530.10|PF01464|SSF53955 BKD09_RS11770 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001444|IPR010930|IPR011491|IPR019776|IPR020013 Fagellar hook-basal body protein, FlgE/F/G|Flagellar basal body rod protein, N-terminal|Flagellar basal body rod protein, conserved site|Flagellar basal-body/hook protein, C-terminal domain|Flagellar hook protein FlgE GO:0071973 PF00460|PF06429|PF07559|PS00588|SSF117143|TIGR03506 BKD09_RS11775 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002371|IPR010930 Flagellar basal-body/hook protein, C-terminal domain|Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 PF06429|SSF64518|TIGR02492 BKD09_RS11780 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PF00669|PF00700|SSF64518 BKD09_RS11785 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010845 Flagellar FlaF GO:0044781 PF07309 BKD09_RS11790 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009967 Flagellum biosynthesis repressor FlbT GO:0006402|GO:0048027|GO:1902209 MF_00783|PF07378|PIRSF009533 BKD09_RS11795 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005648 Flagellar hook capping protein PF03963 BKD09_RS11800 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002191|IPR006305 Bacterial export protein family 3|Flagellar biosynthesis protein FliQ GO:0009306|GO:0016020|GO:0016021|GO:0044780 PF01313|PIRSF004669|PR00952|TIGR01402 BKD09_RS11805 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001712|IPR006301 Flagellar biosynthesis protein FlhA|Type III secretion system FHIPEP GO:0009306|GO:0016020|GO:0016021|GO:0044780 PF00771|PIRSF005419|PR00949|TIGR01398 BKD09_RS11810 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PF01311|PR00953 BKD09_RS11820 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019301 Flagellar protein FlgJ, N-terminal PF10135 BKD09_RS11835 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00486|SM00862|SSF46894|SSF52172 BKD09_RS11845 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000835|IPR011991|IPR023187 MarR-type HTH domain|Transcriptional regulator MarR-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF13463|PR00598|PS01117|SM00347|SSF46785 BKD09_RS11850 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005828|IPR005829|IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator, sugar transporter-like|Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1250.20|PF00083|PF07690|PS00216|PS00217|SSF103473 BKD09_RS11855 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002925|IPR029058 Alpha/Beta hydrolase fold|Dienelactone hydrolase GO:0016787 G3DSA:3.40.50.1820|PF01738|SSF53474 BKD09_RS11860 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001466|IPR012338 Beta-lactamase-related|Beta-lactamase/transpeptidase-like G3DSA:3.40.710.10|PF00144|SSF56601 BKD09_RS11865 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016040|IPR029903 NAD(P)-binding domain|RmlD-like substrate binding domain G3DSA:3.40.50.720|PF04321|SSF51735 BKD09_RS11870 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006439|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain GO:0008152|GO:0016787 G3DSA:3.40.50.1000|PF13419|PR00413|SSF56784|TIGR01509 BKD09_RS11875 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009959|IPR032710 NTF2-like domain|Polyketide cyclase SnoaL-like domain G3DSA:3.10.450.50|PF13474|SSF54427 BKD09_RS11880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000669|IPR008927|IPR013118|IPR013131|IPR013328|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|Mannitol dehydrogenase|Mannitol dehydrogenase, C-terminal|Mannitol dehydrogenase, N-terminal|NAD(P)-binding domain GO:0003824|GO:0008152|GO:0016491|GO:0050662|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF01232|PF08125|PR00084|SSF48179|SSF51735 BKD09_RS11885 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|SM00345|SM00895|SSF46785|SSF48008 BKD09_RS11890 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004682|IPR018389 TRAP transporter solute receptor DctP/TeaA|TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 PF03480|PIRSF006470|TIGR00787 BKD09_RS11895 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290 BKD09_RS11900 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PF06808 BKD09_RS11905 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002328|IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|Alcohol dehydrogenase, zinc-type, conserved site|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PS00059|SM00829|SSF50129|SSF51735 BKD09_RS11910 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004628|IPR013022 Mannonate dehydratase|Xylose isomerase-like, TIM barrel domain GO:0006064|GO:0008927 G3DSA:3.20.20.150|MF_00106|PF03786|PIRSF016049|SSF51658|TIGR00695 BKD09_RS11915 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000262|IPR008259|IPR012133|IPR013785 Aldolase-type TIM barrel|Alpha-hydroxy acid dehydrogenase, FMN-dependent|FMN-dependent alpha-hydroxy acid dehydrogenase, active site|FMN-dependent dehydrogenase GO:0003824|GO:0010181|GO:0016491|GO:0055114 G3DSA:3.20.20.70|PF01070|PIRSF000138|PS00557|SSF51395 BKD09_RS11920 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS11925 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR008995|IPR013611|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0016887|GO:0043190 G3DSA:3.40.50.300|PF00005|PF08402|PS00211|SM00382|SSF50331|SSF52540 BKD09_RS11930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006439|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain GO:0008152|GO:0016787 G3DSA:3.40.50.1000|PF13419|SSF56784|TIGR01493 BKD09_RS11935 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006076|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01266|SSF51905 BKD09_RS11940 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.40.190.10|PF13416|SSF53850 BKD09_RS11945 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS11950 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS11955 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PR00455|SSF46689|SSF48498 BKD09_RS11960 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005828|IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1250.20|PF00083|PF07690|SSF103473 BKD09_RS11965 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002018|IPR019826|IPR029058 Alpha/Beta hydrolase fold|Carboxylesterase type B, active site|Carboxylesterase, type B G3DSA:3.40.50.1820|PF00135|PS00122|SSF53474 BKD09_RS11970 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13673|SSF55729 BKD09_RS11975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000172|IPR007867|IPR012132|IPR023753 FAD/NAD(P)-binding domain|Glucose-methanol-choline oxidoreductase|Glucose-methanol-choline oxidoreductase, C-terminal|Glucose-methanol-choline oxidoreductase, N-terminal GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.50.50.60|PF00732|PF05199|PIRSF000137|PS00623|SSF51905|SSF54373 BKD09_RS11980 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011152|IPR024654|IPR029052 Calcineurin-like phosphoesterase domain, lpxH type|Metallo-dependent phosphatase-like|Phosphoesterase MJ0912 G3DSA:3.60.21.10|PF12850|PIRSF000883|SSF56300 BKD09_RS11990 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030679 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-type amino acid transport system, ATPase component, HisP-type|P-loop containing nucleoside triphosphate hydrolase GO:0003333|GO:0005524|GO:0015424|GO:0016887 G3DSA:3.40.50.300|PF00005|PIRSF039085|PS00211|SM00382|SSF52540 BKD09_RS11995 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 BKD09_RS12000 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001638 Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF00497|SM00062|SSF53850 BKD09_RS12005 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006139|IPR006140|IPR016040|IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF00389|PF02826|PS00671|SSF51735|SSF52283 BKD09_RS12010 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006175|IPR013813 Endoribonuclease L-PSP/chorismate mutase-like|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|SSF55298 BKD09_RS12015 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004838|IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferases, class-I, pyridoxal-phosphate-binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PS00105|SSF53383 BKD09_RS12020 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011766|IPR012000|IPR012001|IPR029035|IPR029061 DHS-like NAD/FAD-binding domain|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0030976 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|SSF52467|SSF52518 BKD09_RS12025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006076|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01266|SSF51905|SSF54373 BKD09_RS12035 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000485|IPR000524|IPR008920|IPR011711|IPR011991 AsnC-type HTH domain|GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00033|PR00035|SM00345|SM00895|SSF46785|SSF48008 BKD09_RS12040 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012001|IPR029061 Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 G3DSA:3.40.50.970|PF02776|SSF52518 BKD09_RS12045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011766|IPR029061 Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 G3DSA:3.40.50.970|PF02775|SSF52518 BKD09_RS12050 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SSF51735 BKD09_RS12055 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS12060 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS12065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.40.190.10|PF13416|SSF53850 BKD09_RS12070 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000843|IPR001761|IPR010982|IPR028082 LacI-type HTH domain|Lambda repressor-like, DNA-binding domain|Periplasmic binding protein-like I|Periplasmic binding protein/LacI sugar binding domain GO:0003677|GO:0006355 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF00532|SM00354|SSF47413|SSF53822 BKD09_RS12075 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005502 ADP-ribosylation/Crystallin J1 PF03747|SSF101478 BKD09_RS12080 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|SM00346|SSF46785|SSF55781 BKD09_RS12085 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003953|IPR023753|IPR027477 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain|Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|G3DSA:3.90.700.10|PF00890|SSF51905|SSF56425 BKD09_RS12090 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS12095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005829|IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain|Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PS00216|SSF103473 BKD09_RS12100 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005199|IPR013781|IPR017853 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 79 GO:0005975|GO:0016020|GO:0016798 G3DSA:3.20.20.80|PF03662|SSF51445 BKD09_RS12105 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS12110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 G3DSA:1.10.3860.10|PF00375|PR00173|SSF118215 BKD09_RS12115 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005255|IPR024084 4-hydroxythreonine-4-phosphate dehydrogenase PdxA|Isopropylmalate dehydrogenase-like domain GO:0008615|GO:0016616|GO:0050570|GO:0051287|GO:0055114 G3DSA:3.40.718.10|MF_00536|PF04166|SSF53659 BKD09_RS12120 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005656 MmgE/PrpD GO:0016829 G3DSA:3.30.1330.120|PF03972|SSF103378 BKD09_RS12125 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005656 MmgE/PrpD GO:0016829 G3DSA:3.30.1330.120|PF03972|SSF103378 BKD09_RS12130 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 BKD09_RS12135 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00080|PR00081|SSF51735 BKD09_RS12140 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF00561|PR00111|SSF53474 BKD09_RS12145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 G3DSA:3.90.850.10|PF01557|SSF56529 BKD09_RS12150 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001638 Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF00497|SM00062|SSF53850 BKD09_RS12160 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|SSF46785|SSF55781 BKD09_RS12165 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005000|IPR011206|IPR015813 Citrate lyase beta subunit-like|HpcH/HpaI aldolase/citrate lyase domain|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 G3DSA:3.20.20.60|PF03328|PIRSF015582|SSF51621 BKD09_RS12170 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002539|IPR029069 HotDog domain|MaoC-like domain G3DSA:3.10.129.10|PF01575|SSF54637 BKD09_RS12175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|SSF89796 BKD09_RS12180 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PF03480 BKD09_RS12185 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290 BKD09_RS12190 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004681|IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein GO:0016021 PF06808|PIRSF006066|TIGR00786 BKD09_RS12195 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|SSF47203|SSF56645 BKD09_RS12200 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain G3DSA:3.40.1080.10|G3DSA:3.40.810.20|PF13336|SSF100950 BKD09_RS12205 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR025110 AMP-binding enzyme C-terminal domain|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|SSF56801 BKD09_RS12210 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005765|IPR029057 Phosphoribosyltransferase-like|Uracil phosphoribosyl transferase GO:0004845|GO:0006223 G3DSA:3.40.50.2020|MF_01218_B|PF14681|SSF53271|TIGR01091 BKD09_RS12230 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002220|IPR005263|IPR013785 4-hydroxy-tetrahydrodipicolinate synthase, DapA|Aldolase-type TIM barrel|DapA-like GO:0003824|GO:0008152|GO:0008840|GO:0009089|GO:0016829 G3DSA:3.20.20.70|MF_00418|PF00701|PIRSF001365|PR00146|SM01130|SSF51569|TIGR00674 BKD09_RS12255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 PF09604|TIGR02115 BKD09_RS12260 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 MF_00275|PF03814|PIRSF001294|TIGR00680 BKD09_RS12265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001757|IPR006391|IPR008250|IPR018303|IPR023214|IPR023299 HAD-like domain|P-type ATPase|P-type ATPase, A domain|P-type ATPase, B chain, subfamily IA|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site GO:0000166|GO:0005524|GO:0006813|GO:0008556|GO:0016021|GO:0046872 G3DSA:2.70.150.10|G3DSA:3.40.1110.10|G3DSA:3.40.50.1000|MF_00285|PF00122|PF00702|PR00119|PS00154|PS01229|SSF56784|SSF81653|SSF81660|SSF81665|TIGR01494|TIGR01497 BKD09_RS12270 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 MF_00276|PF02669|PIRSF001296|TIGR00681 BKD09_RS12275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003018|IPR003594|IPR003661|IPR003852|IPR004358|IPR006016|IPR014729|IPR025201|IPR027417|IPR029016 GAF domain|GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|P-loop containing nucleoside triphosphate hydrolase|Rossmann-like alpha/beta/alpha sandwich fold|Sensor protein KdpD, transmembrane domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal|Signal transduction histidine kinase-related protein, C-terminal|UspA GO:0000155|GO:0000160|GO:0004673|GO:0005515|GO:0006950|GO:0007165|GO:0016020|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:1.20.120.620|G3DSA:3.30.450.40|G3DSA:3.30.565.10|G3DSA:3.40.50.300|G3DSA:3.40.50.620|PF00512|PF00582|PF02518|PF02702|PF13492|PF13493|PR00344|SM00387|SM00388|SSF47384|SSF52402|SSF55781|SSF55874 BKD09_RS12280 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR001867|IPR011006|IPR011991 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF52172 BKD09_RS12285 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006164|IPR009187|IPR016194 Ku70/Ku80 beta-barrel domain|Non-homologous end joining protein Ku, prokaryotic type|SPOC-like, C-terminal domain GO:0003677|GO:0006303 G3DSA:2.40.290.10|MF_01875|PF02735|PIRSF006493|SM00559|SSF100939|TIGR02772 BKD09_RS12290 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012309|IPR012310|IPR012340|IPR014143|IPR014144|IPR014145|IPR014146 DNA ligase D|DNA ligase D, 3'-phosphoesterase domain|DNA ligase D, ligase domain|DNA ligase D, polymerase domain|DNA ligase, ATP-dependent, C-terminal|DNA ligase, ATP-dependent, central|Nucleic acid-binding, OB-fold GO:0003910|GO:0005524|GO:0006281|GO:0006310 G3DSA:2.40.50.140|G3DSA:3.30.1490.70|G3DSA:3.30.470.30|PF01068|PF04679|PF13298|SSF50249|SSF56091|TIGR02776|TIGR02777|TIGR02778|TIGR02779 BKD09_RS12295 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021738 Protein of unknown function DUF3309 PF11752 BKD09_RS12300 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013433 Putative polyhydroxyalkanoic acid system protein PF09650 BKD09_RS12305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006047|IPR012767|IPR013781|IPR013797|IPR017853 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycosyl hydrolase, family 13, catalytic domain|Malto-oligosyltrehalose synthase|Maltooligosyl trehalose synthase, N-terminal GO:0003824|GO:0005975 G3DSA:1.10.10.470|G3DSA:1.10.150.200|G3DSA:3.20.20.80|G3DSA:3.30.1590.10|PF00128|SM00642|SSF51445|TIGR02401 BKD09_RS12310 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004193|IPR006047|IPR012768|IPR013781|IPR013783|IPR014756|IPR017853|IPR022567 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13, N-terminal|Glycosyl hydrolase, C-terminal (DUF3459)|Glycosyl hydrolase, family 13, catalytic domain|Immunoglobulin E-set|Immunoglobulin-like fold|Malto-oligosyltrehalose trehalohydrolase GO:0003824|GO:0004553|GO:0005975|GO:0005992 G3DSA:2.60.40.10|G3DSA:3.20.20.80|PF00128|PF02922|PF11941|PIRSF006337|SM00642|SSF51445|SSF81296|TIGR02402 BKD09_RS12315 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004193|IPR006047|IPR011837|IPR013780|IPR013781|IPR013783|IPR014756|IPR017853 Glycogen debranching enzyme, GlgX type|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13, N-terminal|Glycosyl hydrolase, all-beta|Glycosyl hydrolase, family 13, catalytic domain|Immunoglobulin E-set|Immunoglobulin-like fold GO:0003824|GO:0004133|GO:0004553|GO:0005975|GO:0005980 G3DSA:2.60.40.10|G3DSA:2.60.40.1180|G3DSA:3.20.20.80|PF00128|PF02922|SM00642|SSF51011|SSF51445|SSF81296|TIGR02100 BKD09_RS12320 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004193|IPR006047|IPR006048|IPR006407|IPR013780|IPR013781|IPR013783|IPR014756|IPR017853 1,4-alpha-glucan-branching enzyme, GlgB|Alpha-amylase/branching enzyme, C-terminal all beta|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13, N-terminal|Glycosyl hydrolase, all-beta|Glycosyl hydrolase, family 13, catalytic domain|Immunoglobulin E-set|Immunoglobulin-like fold GO:0003824|GO:0003844|GO:0004553|GO:0005975|GO:0005978|GO:0043169 G3DSA:2.60.40.10|G3DSA:2.60.40.1180|G3DSA:3.20.20.80|MF_00685|PF00128|PF02806|PF02922|PIRSF000463|SM00642|SSF51011|SSF51445|SSF81296|TIGR01515 BKD09_RS12325 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006047|IPR011009|IPR012810|IPR012811|IPR013780|IPR013781|IPR017853|IPR032091 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycosyl hydrolase, all-beta|Glycosyl hydrolase, family 13, catalytic domain|Maltogenic Amylase, C-terminal|Protein kinase-like domain|Trehalose synthase/alpha-amylase, N-terminal|Trehalose synthase/probable maltokinase, C-terminal domain GO:0003824|GO:0005975 G3DSA:2.60.40.1180|G3DSA:3.20.20.80|G3DSA:3.90.1200.10|G3DSA:3.90.400.10|PF00128|PF16657|SM00642|SSF51011|SSF51445|SSF56112|TIGR02456|TIGR02457 BKD09_RS12330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006047|IPR013781|IPR017853|IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0004553|GO:0005975 G3DSA:3.20.20.80|PF00128|PF11896|SM00642|SSF51445 BKD09_RS12335 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003385|IPR013781|IPR017853 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 77 GO:0004134|GO:0005975 G3DSA:3.20.20.80|PF02446|SSF51445|TIGR00217 BKD09_RS12340 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008928|IPR011613|IPR012341 Glycoside hydrolase family 15/Phosphorylase b kinase regulatory chain family|Six-hairpin glycosidase|Six-hairpin glycosidase-like GO:0003824 G3DSA:1.50.10.10|PF00723|SSF48208 BKD09_RS12345 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000150|IPR006379|IPR023214 Cof protein|HAD-like domain|HAD-superfamily hydrolase, subfamily IIB GO:0016787 G3DSA:3.30.1240.10|G3DSA:3.40.50.1000|PF08282|PS01228|SSF56784|TIGR00099|TIGR01484 BKD09_RS12350 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006001|IPR027417|IPR031322 Carbohydrate kinase, thermoresistant glucokinase|P-loop containing nucleoside triphosphate hydrolase|Shikimate kinase/gluconokinase GO:0005975|GO:0016301 G3DSA:3.40.50.300|PF01202|SSF52540|TIGR01313 BKD09_RS12355 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005900|IPR006148 6-phosphogluconolactonase, DevB-type|Glucosamine/galactosamine-6-phosphate isomerase GO:0005975|GO:0006098|GO:0017057 G3DSA:3.40.50.1360|PF01182|SSF100950|TIGR01198 BKD09_RS12360 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001282|IPR016040|IPR019796|IPR022674|IPR022675 Glucose-6-phosphate dehydrogenase|Glucose-6-phosphate dehydrogenase, C-terminal|Glucose-6-phosphate dehydrogenase, NAD-binding|Glucose-6-phosphate dehydrogenase, active site|NAD(P)-binding domain GO:0004345|GO:0006006|GO:0050661|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_00966|PF00479|PF02781|PIRSF000110|PR00079|PS00069|SSF51735|SSF55347|TIGR00871 BKD09_RS12365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004849|IPR006114|IPR006115|IPR006183|IPR008927|IPR013328|IPR016040 6-phosphogluconate dehydrogenase|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, C-terminal|6-phosphogluconate dehydrogenase, NADP-binding|6-phosphogluconate dehydrogenase, YqeC-type|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0004616|GO:0006098|GO:0016491|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF00393|PF03446|PR00076|SM01350|SSF48179|SSF51735|TIGR00872 BKD09_RS12370 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001585|IPR001672|IPR004732|IPR013785|IPR018225 Aldolase-type TIM barrel|Phosphoglucose isomerase (PGI)|Transaldolase type 2|Transaldolase, active site|Transaldolase/Fructose-6-phosphate aldolase GO:0003824|GO:0004347|GO:0004801|GO:0005737|GO:0005975|GO:0006094|GO:0006096|GO:0006098 G3DSA:3.20.20.70|G3DSA:3.40.50.10490|MF_00493|PF00342|PF00923|PR00662|PS00958|PS01054|SSF51569|SSF53697|TIGR00876 BKD09_RS12380 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010650|IPR013153|IPR016230|IPR027417 P-loop containing nucleoside triphosphate hydrolase|PrkA AAA domain|PrkA C-terminal domain|Serine-protein kinase, PrkA GO:0004672 G3DSA:3.40.50.300|PF06798|PF08298|PIRSF000549|SM00763|SSF52540 BKD09_RS12385 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006698 Uncharacterised protein family UPF0229 MF_01232|PF04285 BKD09_RS12390 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007390 Sporulation stage V, protein R PF04293 BKD09_RS12395 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014922 Domain of unknown function DUF1801 PF08818|SSF159888 BKD09_RS12405 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013538|IPR023393 Activator of Hsp90 ATPase homologue 1-like|START-like domain GO:0006950 G3DSA:3.30.530.20|PF08327|SSF55961 BKD09_RS12410 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001845|IPR011991 HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12840|PR00778|SM00418|SSF46785 BKD09_RS12415 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003787|IPR027396 DsrEFH-like|Sulphur relay, DsrE/F-like protein G3DSA:3.40.1260.10|PF02635|SSF75169 BKD09_RS12430 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR005532|IPR016187|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|C-type lectin fold|Nucleotide cyclase|Sulfatase-modifying factor enzyme GO:0009190|GO:0016849|GO:0035556 G3DSA:3.30.70.1230|G3DSA:3.90.1580.10|PF00211|PF03781|SSF55073|SSF56436 BKD09_RS12435 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025512 Domain of unknown function DUF4399 PF14347 BKD09_RS12440 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011766|IPR029061 Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 G3DSA:3.40.50.970|PF02775|SSF52518 BKD09_RS12445 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002869|IPR002880|IPR009014|IPR019752|IPR022367|IPR029061 2-oxoacid:acceptor oxidoreductase, alpha subunit|Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal|Pyruvate-flavodoxin oxidoreductase, central domain|Pyruvate/ketoisovalerate oxidoreductase, catalytic domain|Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152|GO:0016491|GO:0016903|GO:0055114 G3DSA:3.40.50.970|G3DSA:3.40.920.10|PF01558|PF01855|SSF52518|SSF52922|SSF53323|TIGR03710 BKD09_RS12450 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR017896|IPR017900|IPR023753|IPR028261 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Dihydroprymidine dehydrogenase domain II|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:1.10.1060.10|G3DSA:3.50.50.60|PF07992|PF12838|PF14691|PR00419|PS00198|SSF51971|SSF54862 BKD09_RS12460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR002410|IPR005944|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Peptidase S33|Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508|GO:0008233 G3DSA:3.40.50.1820|PF00561|PIRSF006431|PR00793|SSF53474|TIGR01249 BKD09_RS12465 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000385|IPR006638|IPR007197|IPR011843|IPR013785|IPR017200|IPR023885 4Fe4S-binding SPASM domain|Aldolase-type TIM barrel|Coenzyme PQQ biosynthesis protein E, bacteria|Coenzyme PQQ synthesis protein E|Elongator protein 3/MiaB/NifB|MoaA/nifB/pqqE, iron-sulphur binding, conserved site|Radical SAM GO:0003824|GO:0018189|GO:0046872|GO:0051536|GO:0051539 G3DSA:3.20.20.70|MF_00660|PF04055|PF13186|PF13353|PIRSF037420|PS01305|SM00729|SSF102114|TIGR02109|TIGR04085 BKD09_RS12470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008792|IPR022479 Coenzyme PQQ synthesis D|Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 MF_00655|PF05402|TIGR03859 BKD09_RS12475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004305|IPR011845|IPR016084 Coenzyme PQQ biosynthesis protein C|Haem oxygenase-like, multi-helical|Thiaminase-2/PQQC GO:0018189|GO:0055114 G3DSA:1.20.910.10|MF_00654|PF03070|SSF48613|TIGR02111 BKD09_RS12480 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279|IPR011842 Coenzyme PQQ biosynthesis protein B|Metallo-beta-lactamase GO:0006810|GO:0018189 G3DSA:3.60.15.10|MF_00653|PF12706|SSF56281|TIGR02108 BKD09_RS12485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 MF_00656|PF08042|TIGR02107 BKD09_RS12495 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR020556|IPR023631 Amidase signature domain|Amidase, conserved site G3DSA:3.90.1300.10|PF01425|PS00571|SSF75304 BKD09_RS12500 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000889|IPR012336|IPR029759|IPR029760 Glutathione peroxidase|Glutathione peroxidase active site|Glutathione peroxidase conserved site|Thioredoxin-like fold GO:0004602|GO:0006979|GO:0055114 G3DSA:3.40.30.10|PF00255|PIRSF000303|PR01011|PS00460|PS00763|SSF52833 BKD09_RS12505 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021724 Protein of unknown function DUF3297 PF11730 BKD09_RS12510 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013342|IPR029017|IPR029065 Enolase C-terminal domain-like|Enolase N-terminal domain-like|Mandelate racemase/muconate lactonizing enzyme, C-terminal G3DSA:3.20.20.120|G3DSA:3.30.390.10|PF13378|SM00922|SSF51604|SSF54826 BKD09_RS12515 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007349 Domain of unknown function DUF418 PF04235 BKD09_RS12520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005656 MmgE/PrpD GO:0016829 G3DSA:3.30.1330.120|PF03972|SSF103378 BKD09_RS12525 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007956 Malonyl-CoA decarboxylase GO:0006633|GO:0050080 PF05292 BKD09_RS12535 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS12540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001036|IPR004764|IPR027463 Acriflavin resistance protein|Hydrophobe/amphiphile efflux-1 HAE1|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|SSF82693|SSF82714|SSF82866|TIGR00915 BKD09_RS12545 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|SSF111369|TIGR01730 BKD09_RS12550 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001638 Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF00497|SM00062|SSF53850 BKD09_RS12555 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13673|SSF55729 BKD09_RS12560 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011048|IPR015943|IPR019405 Cytochrome cd1-nitrite reductase-like, haem d1 domain|Lactonase, 7-bladed beta propeller|WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.130.10.10|PF10282|SSF51004 BKD09_RS12565 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007312 Phosphoesterase GO:0016788 PF04185 BKD09_RS12570 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004852|IPR009056 Cytochrome c-like domain|Di-haem cytochrome c peroxidase GO:0009055|GO:0016491|GO:0020037|GO:0055114 G3DSA:1.10.760.10|PF03150|SSF46626 BKD09_RS12580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000960|IPR016040|IPR020946|IPR023753 FAD/NAD(P)-binding domain|Flavin monooxygenase FMO|Flavin monooxygenase-like|NAD(P)-binding domain GO:0004499|GO:0016491|GO:0050660|GO:0050661|GO:0055114 G3DSA:3.50.50.60|PF00743|PR00370|SSF51735|SSF51905 BKD09_RS12585 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 BKD09_RS12590 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003313|IPR009057|IPR018060 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PF14525|SM00342|SSF46689 BKD09_RS12595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR001789|IPR003594|IPR003661|IPR004358|IPR011006|IPR013767 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0006355|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF00989|PF02518|PR00344|SM00091|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55785|SSF55874|TIGR00229 BKD09_RS12600 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001387|IPR010982|IPR011051|IPR013096|IPR014710 Cro/C1-type helix-turn-helix domain|Cupin 2, conserved barrel|Lambda repressor-like, DNA-binding domain|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0003677|GO:0043565 G3DSA:1.10.260.40|G3DSA:2.60.120.10|PF01381|PF07883|SM00530|SSF47413|SSF51182 BKD09_RS12605 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|SSF53850 BKD09_RS12610 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS12615 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR025966 ABC transporter type 1, transmembrane domain MetI-like|Oligopeptide transport permease C-like, N-terminal domain GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PF12911|SSF161098 BKD09_RS12620 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006076|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01266|SSF51905 BKD09_RS12625 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006140|IPR016040|IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1|NAD(P)-binding domain GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF02826|PS00065|SSF51735|SSF52283 BKD09_RS12630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540 BKD09_RS12635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR018060|IPR018062|IPR020449 DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PR00032|PS00041|SM00342|SSF46689 BKD09_RS12645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR001660|IPR011990|IPR013761|IPR027417|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|Nucleotide cyclase|P-loop containing nucleoside triphosphate hydrolase|Sterile alpha motif domain|Sterile alpha motif/pointed domain|Tetratricopeptide-like helical domain GO:0005515|GO:0009190|GO:0016849|GO:0035556 G3DSA:1.10.150.50|G3DSA:1.25.40.10|G3DSA:3.30.70.1230|PF00211|PF00536|PF13191|SM00044|SM00454|SSF47769|SSF48452|SSF52540|SSF55073 BKD09_RS12650 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009656|IPR010915|IPR029058 Alpha/Beta hydrolase fold|PHB de-polymerase, C-terminal|Polyhydroxyalkanoate depolymerase G3DSA:3.40.50.1820|PF06850|PIRSF020818|SSF53474|TIGR01849 BKD09_RS12655 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004045|IPR010987|IPR012336 Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF13410|PF13417|SSF47616|SSF52833 BKD09_RS12670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013341|IPR013342|IPR018110|IPR029017|IPR029065 Enolase C-terminal domain-like|Enolase N-terminal domain-like|Mandelate racemase/muconate lactonizing enzyme, C-terminal|Mandelate racemase/muconate lactonizing enzyme, N-terminal domain|Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 G3DSA:3.20.20.120|G3DSA:3.30.390.10|PF02746|PF13378|PS00908|SM00922|SSF51604|SSF54826 BKD09_RS12675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR010499|IPR011256|IPR018060|IPR029442 Bacterial transcription activator, effector binding|DNA binding HTH domain, AraC-type|GyrI-like small molecule binding domain|Homeodomain-like|Regulatory factor, effector binding domain GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:3.20.80.10|PF06445|PF12833|SM00342|SM00871|SSF46689|SSF55136 BKD09_RS12680 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005511|IPR011042|IPR013658 SMP-30/Gluconolactonase/LRE-like region|Senescence marker protein-30 (SMP-30)|Six-bladed beta-propeller, TolB-like G3DSA:2.120.10.30|PF08450|PR01790|SSF63829 BKD09_RS12685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13302|SSF55729 BKD09_RS12690 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000172|IPR007867|IPR012132|IPR023753 FAD/NAD(P)-binding domain|Glucose-methanol-choline oxidoreductase|Glucose-methanol-choline oxidoreductase, C-terminal|Glucose-methanol-choline oxidoreductase, N-terminal GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.50.50.60|PF00732|PF05199|PIRSF000137|PS00623|PS00624|SSF51905|SSF54373 BKD09_RS12700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003593|IPR011704|IPR027417 AAA+ ATPase domain|ATPase, dynein-related, AAA domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF07728|SM00382|SSF52540 BKD09_RS12705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007341 Transglycosylase-associated protein GO:0016021 PF04226 BKD09_RS12710 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008912 Uncharacterised protein family CoxE-like PF05762 BKD09_RS12715 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001763 Rhodanese-like domain G3DSA:3.40.250.10|PF00581|SM00450|SSF52821 BKD09_RS12720 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001307|IPR001763 Rhodanese-like domain|Thiosulphate sulfurtransferase, conserved site GO:0004792 G3DSA:3.40.250.10|PF00581|PS00380|SM00450|SSF52821 BKD09_RS12730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005490 L,D-transpeptidase catalytic domain GO:0016740 G3DSA:2.40.440.10|PF03734|SSF141523 BKD09_RS12735 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006139|IPR006140|IPR016040|IPR029752|IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF00389|PF02826|PS00065|PS00671|SSF51735|SSF52283 BKD09_RS12745 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR022374|IPR027417|IPR032781 AAA+ ATPase domain|ABC transporter, ATP-binding protein, ChvD|ABC transporter, conserved site|ABC transporter-like|ABC-transporter extension domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12848|PS00211|SM00382|SSF52540|TIGR03719 BKD09_RS12750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002477|IPR011970|IPR023346|IPR031304 Lysozyme-like domain|Lytic murein transglycosylase|Peptidoglycan binding-like|Transglycosylase SLT domain 2 G3DSA:1.10.101.10|G3DSA:1.10.530.10|PF01471|PF13406|SSF47090|SSF53955|TIGR02283 BKD09_RS12770 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007419 BFD-like [2Fe-2S]-binding domain PF04324 BKD09_RS12775 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002024|IPR008331|IPR009078|IPR012347 Bacterioferritin|Ferritin-like superfamily|Ferritin-related|Ferritin/DPS protein domain GO:0006826|GO:0006879|GO:0008199 G3DSA:1.20.1260.10|PF00210|PIRSF002560|PR00601|PS00549|SSF47240|TIGR00754 BKD09_RS12780 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011576|IPR012349|IPR024029 FMN-binding split barrel|Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain|Pyridoxamine 5-phosphate oxidase, FMN-dependent GO:0004733|GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF01243|SSF50475|TIGR04025 BKD09_RS12785 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000209|IPR015500|IPR022398|IPR023827|IPR023828 Peptidase S8, subtilisin, Asp-active site|Peptidase S8, subtilisin, His-active site|Peptidase S8, subtilisin, Ser-active site|Peptidase S8, subtilisin-related|Peptidase S8/S53 domain GO:0004252|GO:0006508 G3DSA:3.40.50.200|PF00082|PR00723|PS00136|PS00137|PS00138|SSF52743 BKD09_RS12800 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007351 Uncharacterised protein YjbR PF04237|SSF142906 BKD09_RS12805 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR008220|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 G3DSA:3.40.50.1820|PF00561|PIRSF000443|PR00111|SSF53474 BKD09_RS12810 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018735 Protein of unknown function DUF2277 PF10041 BKD09_RS12820 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008160 Collagen triple helix repeat PF01391 BKD09_RS12825 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002197|IPR009057 DNA binding HTH domain, Fis-type|Homeodomain-like GO:0003677|GO:0043565 G3DSA:1.10.10.60|PF02954|PR01590|SSF46689 BKD09_RS12830 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00080|PR00081|SSF51735 BKD09_RS12835 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001623 DnaJ domain G3DSA:1.10.287.110|SSF46565 BKD09_RS12850 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006175|IPR013813 Endoribonuclease L-PSP/chorismate mutase-like|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|SSF55298 BKD09_RS12860 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010987|IPR012336|IPR033468 Glutathione S-transferase, C-terminal-like|Metaxin, glutathione S-transferase domain|Thioredoxin-like fold G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF17171|PF17172|SSF47616|SSF52833 BKD09_RS12870 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004045|IPR010987|IPR012336 Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF02798|SSF47616|SSF52833 BKD09_RS12875 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009725|IPR028973|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|PhnB-like|Predicted 3-demethylubiquinone-9 3-methyltransferase G3DSA:3.10.180.10|PF06983|PIRSF021700|SSF54593 BKD09_RS12880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00081|PS00061|SSF51735 BKD09_RS12885 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005122 Uracil-DNA glycosylase-like G3DSA:3.40.470.10|PF03167|SSF52141 BKD09_RS12895 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002817|IPR025747 Phosphomethylpyrimidine synthase|ThiC-associated domain GO:0009228|GO:0051536 MF_00089|PF01964|PF13667|TIGR00190 BKD09_RS12900 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003733|IPR013785|IPR022998 Aldolase-type TIM barrel|Thiamin phosphate synthase superfamily|Thiamine phosphate synthase GO:0003824|GO:0004789|GO:0009228 G3DSA:3.20.20.70|PF02581|SSF51391|TIGR00693 BKD09_RS12905 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008867|IPR013785 Aldolase-type TIM barrel|Thiazole biosynthesis GO:0003824|GO:0009228 G3DSA:3.20.20.70|MF_00443|PF05690|SSF110399 BKD09_RS12910 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003749|IPR010035|IPR012675|IPR016155 Beta-grasp domain|Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp|ThiS, thiamine-biosynthesis|ThiamineS/Molybdopterin converting factor subunit 1 G3DSA:3.10.20.30|PF02597|SSF54285|TIGR01683 BKD09_RS12915 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006076|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01266|SSF51971|SSF54373 BKD09_RS12920 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008258|IPR023346 Lysozyme-like domain|Transglycosylase SLT domain 1 G3DSA:1.10.530.10|PF01464|SSF53955 BKD09_RS12925 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007087 Zinc finger, C2H2 GO:0046872 PS00028 BKD09_RS12930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003594|IPR003660|IPR003661|IPR004358 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PR00344|SM00304|SM00387|SM00388|SSF47384|SSF55874 BKD09_RS12935 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF46894|SSF52172 BKD09_RS12945 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011033|IPR027275 PRC-barrel domain|PRC-barrel-like G3DSA:2.30.30.240|PF05239|SSF50346 BKD09_RS12950 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS12955 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS12960 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS12965 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.40.190.10|PF13416|SSF53850 BKD09_RS12970 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR005893|IPR008995|IPR013611|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Spermidine/putrescine ABC transporter, ATP-binding subunit|Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0015417|GO:0015846|GO:0016820|GO:0016887|GO:0043190 G3DSA:3.40.50.300|PF00005|PF08402|PS00211|SM00382|SSF50331|SSF52540|TIGR01187 BKD09_RS12975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025515 Protein of unknown function DUF4403 PF14356 BKD09_RS12980 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002372|IPR015943 Pyrrolo-quinoline quinone repeat|WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.130.10.10|PF13360|SSF63829 BKD09_RS12985 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011990|IPR011991 Tetratricopeptide-like helical domain|Winged helix-turn-helix DNA-binding domain GO:0005515 G3DSA:1.10.10.10|G3DSA:1.25.40.10|SSF46785 BKD09_RS12990 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010296 Protein of unknown function DUF899, thioredoxin-like PF05988 BKD09_RS13000 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 BKD09_RS13005 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000485|IPR011008|IPR011991|IPR019885|IPR019887|IPR019888 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Transcription regulator HTH, AsnC-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13412|PR00033|PS00519|SM00344|SSF46785|SSF54909 BKD09_RS13010 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032710 NTF2-like domain G3DSA:3.10.450.50|PF12893|SSF54427 BKD09_RS13015 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002327|IPR009056 Cytochrome c, class IA/ IB|Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF00034|PR00604|SSF46626 BKD09_RS13020 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005490 L,D-transpeptidase catalytic domain GO:0016740 G3DSA:2.40.440.10|PF03734|SSF141523 BKD09_RS13025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF13439|PF13692|SSF53756 BKD09_RS13030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|SSF53335 BKD09_RS13040 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005814|IPR015421|IPR015422|IPR015424 Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0008483|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00202|PS00600|SSF53383 BKD09_RS13045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003817|IPR033177 Phosphatidylserine decarboxylase|Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 PF02666|TIGR00163 BKD09_RS13050 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000086|IPR015797|IPR020084|IPR020476 NUDIX hydrolase|NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site GO:0016787 G3DSA:3.90.79.10|PF00293|PR00502|PS00893|SSF55811 BKD09_RS13055 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006860 FecR protein PF04773 BKD09_RS13060 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019223 Domain of unknown function DUF2147 PF09917 BKD09_RS13065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019223 Domain of unknown function DUF2147 PF09917 BKD09_RS13080 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009683 Extensin-like, C-terminal PF06904 BKD09_RS13085 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013078|IPR029033 Histidine phosphatase superfamily|Histidine phosphatase superfamily, clade-1 G3DSA:3.40.50.1240|PF00300|SSF53254 BKD09_RS13095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893|IPR023772 DNA-binding HTH domain, TetR-type|DNA-binding HTH domain, TetR-type, conserved site|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PF14246|PR00455|PS01081|SSF46689|SSF48498 BKD09_RS13100 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF00529|PF16576|SSF111369 BKD09_RS13105 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004638|IPR011701|IPR020846 Drug resistance transporter EmrB/QacA subfamily|Major facilitator superfamily|Major facilitator superfamily domain GO:0006810|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473|TIGR00711 BKD09_RS13110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|SM00382|SSF52540|SSF90123 BKD09_RS13115 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|PIRSF006603|TIGR00797 BKD09_RS13120 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007016 O-antigen ligase-related PF04932 BKD09_RS13125 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925 BKD09_RS13135 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR004839|IPR011991|IPR015421|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0003824|GO:0006355|GO:0009058|GO:0030170 G3DSA:1.10.10.10|G3DSA:3.40.640.10|PF00155|PF00392|SM00345|SSF46785|SSF53383 BKD09_RS13140 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009325 Protein of unknown function DUF983 PF06170 BKD09_RS13145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|SSF53474 BKD09_RS13155 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005545|IPR011008 Dimeric alpha-beta barrel|YCII-related G3DSA:3.30.70.1060|PF03795|SSF54909 BKD09_RS13160 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005545|IPR011008 Dimeric alpha-beta barrel|YCII-related G3DSA:3.30.70.1060|PF03795|SSF54909 BKD09_RS13165 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007627|IPR011991|IPR013324|IPR013325 RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|SSF88659|SSF88946 BKD09_RS13170 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002477|IPR002502 N-acetylmuramoyl-L-alanine amidase domain|Peptidoglycan binding-like GO:0008745|GO:0009253 G3DSA:1.10.101.10|G3DSA:3.40.80.10|PF01471|PF01510|SM00644|SSF47090|SSF55846 BKD09_RS13175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002903|IPR023397|IPR029063 Ribosomal RNA small subunit methyltransferase H|S-adenosyl-L-methionine-dependent methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 G3DSA:1.10.150.170|G3DSA:3.40.50.150|MF_01007|PF01795|PIRSF004486|SSF53335|SSF81799|TIGR00006 BKD09_RS13185 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001460|IPR005311|IPR012338 Beta-lactamase/transpeptidase-like|Penicillin-binding protein, dimerisation domain|Penicillin-binding protein, transpeptidase GO:0008658 G3DSA:3.40.710.10|G3DSA:3.90.1310.10|PF00905|PF03717|SSF56519|SSF56601 BKD09_RS13190 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000713|IPR004101|IPR005761|IPR013221 Mur ligase, C-terminal|Mur ligase, N-terminal catalytic domain|Mur ligase, central|UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0009058|GO:0016874|GO:0016881|GO:0051301 G3DSA:3.40.1190.10|G3DSA:3.40.1390.10|G3DSA:3.90.190.20|MF_00208|PF01225|PF02875|PF08245|SSF53244|SSF53623|SSF63418|TIGR01085 BKD09_RS13195 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000713|IPR004101|IPR013221 Mur ligase, C-terminal|Mur ligase, N-terminal catalytic domain|Mur ligase, central GO:0005524|GO:0009058|GO:0016874 G3DSA:3.40.1190.10|G3DSA:3.40.1390.10|G3DSA:3.90.190.20|PF02875|PF08245|SSF53244|SSF53623|SSF63418 BKD09_RS13200 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000715|IPR003524|IPR018480 Glycosyl transferase, family 4|Phospho-N-acetylmuramoyl-pentapeptide transferase|Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site GO:0008963|GO:0016020|GO:0016021 MF_00038|PF00953|PF10555|PS01347|PS01348|TIGR00445 BKD09_RS13205 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004101|IPR005762|IPR013221|IPR016040 Mur ligase, C-terminal|Mur ligase, central|NAD(P)-binding domain|UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0009058|GO:0016874|GO:0051301 G3DSA:3.40.1190.10|G3DSA:3.40.50.720|G3DSA:3.90.190.20|MF_00639|PF02875|PF08245|SSF51735|SSF53244|SSF53623|TIGR01087 BKD09_RS13215 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001182|IPR013437 Cell cycle protein FtsW/RodA|Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 PF01098|TIGR02614 BKD09_RS13220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004276|IPR006009|IPR007235 Glycosyl transferase, family 28, C-terminal|Glycosyltransferase family 28, N-terminal domain|N-acetylglucosaminyltransferase, MurG GO:0005975|GO:0009252|GO:0016758|GO:0030259|GO:0050511 G3DSA:3.40.50.2000|MF_00033|PF03033|PF04101|SSF53756|TIGR01133 BKD09_RS13225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000713|IPR004101|IPR005758|IPR013221|IPR016040 Mur ligase, C-terminal|Mur ligase, N-terminal catalytic domain|Mur ligase, central|NAD(P)-binding domain|UDP-N-acetylmuramate--L-alanine ligase GO:0005524|GO:0008763|GO:0009058|GO:0009252|GO:0016874 G3DSA:3.40.1190.10|G3DSA:3.40.50.720|G3DSA:3.90.190.20|MF_00046|PF01225|PF02875|PF08245|SSF51984|SSF53244|SSF53623|TIGR01082 BKD09_RS13230 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003170|IPR006094|IPR011601|IPR016166|IPR016167|IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|UDP-N-acetylenolpyruvoylglucosamine reductase|UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0003824|GO:0008762|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.30.43.10|G3DSA:3.30.465.10|G3DSA:3.90.78.10|MF_00037|PF01565|PF02873|SSF56176|SSF56194|TIGR00179 BKD09_RS13235 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011095|IPR011127|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|D-alanine--D-alanine ligase, C-terminal|D-alanine--D-alanine ligase, N-terminal domain|Pre-ATP-grasp domain GO:0003824|GO:0005524|GO:0008716 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|PF01820|PF07478|SSF52440|SSF56059 BKD09_RS13240 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005548|IPR013685|IPR026579 Cell division protein FtsQ|Cell division protein FtsQ/DivIB|Polypeptide-transport-associated, FtsQ-type GO:0090529 MF_00911|PF03799|PF08478 BKD09_RS13245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003494|IPR020823 Cell division protein FtsA|SHS2 domain inserted in FtsA GO:0005515|GO:0007049 G3DSA:3.30.1490.110|G3DSA:3.30.420.40|G3DSA:3.90.640.10|MF_02033|PF02491|PF14450|PIRSF003101|SM00842|SSF53067|TIGR01174 BKD09_RS13250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000158|IPR003008|IPR008280|IPR017844|IPR018316|IPR020805|IPR024757 Cell division protein FtsZ|Cell division protein FtsZ, C-terminal|Cell division protein FtsZ, C-terminal extension|Cell division protein FtsZ, conserved site|Tubulin/FtsZ, 2-layer sandwich domain|Tubulin/FtsZ, C-terminal|Tubulin/FtsZ, GTPase domain GO:0000910|GO:0003924|GO:0005525|GO:0005737 G3DSA:3.30.1330.20|G3DSA:3.40.50.1440|MF_00909|PF00091|PF12327|PR00423|PS01134|PS01135|SM00864|SM00865|SSF52490|SSF55307|TIGR00065|TIGR03483 BKD09_RS13255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004463|IPR011334|IPR015870|IPR020568 Ribosomal protein S5 domain 2-type fold|UDP-3-O-acyl N-acetylglucosamine deacetylase|UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal|UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 G3DSA:3.30.1700.10|G3DSA:3.30.230.20|MF_00388|PF03331|SSF54211|TIGR00325 BKD09_RS13260 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011990|IPR017689 Outer membrane protein assembly factor BamD|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|MF_00922|PF13525|SSF48452|TIGR03302 BKD09_RS13265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003395|IPR004604|IPR027417 DNA recombination/repair protein RecN|P-loop containing nucleoside triphosphate hydrolase|RecF/RecN/SMC, N-terminal GO:0005524|GO:0006281|GO:0006310 G3DSA:3.40.50.300|PF02463|PIRSF003128|SSF52540|TIGR00634 BKD09_RS13270 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001357|IPR001679|IPR004150|IPR010994|IPR012340|IPR013839|IPR013840|IPR018239 BRCT domain|NAD-dependent DNA ligase|NAD-dependent DNA ligase, N-terminal|NAD-dependent DNA ligase, OB-fold|NAD-dependent DNA ligase, active site|NAD-dependent DNA ligase, adenylation|Nucleic acid-binding, OB-fold|RuvA domain 2-like GO:0003911|GO:0006260|GO:0006281 G3DSA:1.10.150.20|G3DSA:1.10.287.610|G3DSA:2.40.50.140|G3DSA:3.30.470.30|G3DSA:3.40.50.10190|MF_01588|PF00533|PF01653|PF03120|PF12826|PIRSF001604|PS01055|SM00292|SM00532|SSF47781|SSF50249|SSF52113|SSF56091|TIGR00575 BKD09_RS13275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004812|IPR005829|IPR011701|IPR020846 Drug resistance transporter Bcr/CmlA subfamily|Major facilitator superfamily|Major facilitator superfamily domain|Sugar transporter, conserved site GO:0005215|GO:0006810|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PS00216|SSF103473|TIGR00710 BKD09_RS13280 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000587|IPR000994|IPR028980|IPR029149|IPR032416 Creatinase, N-terminal|Creatinase/Aminopeptidase P, N-terminal|Creatinase/Aminopeptidase P/Spt16, N-terminal|Peptidase M24, C-terminal domain|Peptidase M24, structural domain GO:0016787 G3DSA:3.40.350.10|G3DSA:3.90.230.10|PF00557|PF01321|PF16188|PF16189|SSF53092|SSF55920 BKD09_RS13290 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004498|IPR029063 Ribosomal protein L11 methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase GO:0006479|GO:0008276 G3DSA:3.40.50.150|MF_00735|PF06325|SSF53335 BKD09_RS13295 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007047 Flp/Fap pilin component PF04964 BKD09_RS13305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002937|IPR023753 Amine oxidase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01593|SSF51905 BKD09_RS13310 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|SSF53335 BKD09_RS13315 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR017946|IPR030395 Glycerophosphodiester phosphodiesterase domain|PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 G3DSA:3.20.20.190|PF03009|SSF51695 BKD09_RS13320 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.40.630.10|SSF53187 BKD09_RS13325 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005490 L,D-transpeptidase catalytic domain GO:0016740 G3DSA:2.40.440.10|PF03734|SSF141523 BKD09_RS13335 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000412|IPR013525 ABC-2 transporter|ABC-2 type transporter GO:0006810|GO:0016020 PF01061|PIRSF006648|PR00164 BKD09_RS13340 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS13345 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012367|IPR029058 Alpha/Beta hydrolase fold|Uncharacterised conserved protein thioesterase G3DSA:3.40.50.1820|PIRSF036200|SSF53474 BKD09_RS13350 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001128|IPR002397|IPR017972 Cytochrome P450|Cytochrome P450, B-class|Cytochrome P450, conserved site GO:0005506|GO:0016705|GO:0020037|GO:0055114 G3DSA:1.10.630.10|PF00067|PR00359|PS00086|SSF48264 BKD09_RS13355 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS13360 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000835|IPR011991|IPR023187 MarR-type HTH domain|Transcriptional regulator MarR-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PR00598|PS01117|SM00347|SSF46785 BKD09_RS13365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893|IPR023772 DNA-binding HTH domain, TetR-type|DNA-binding HTH domain, TetR-type, conserved site|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PF13977|PR00455|PS01081|SSF46689|SSF48498 BKD09_RS13370 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021747 Protein of unknown function DUF3313 PF11769 BKD09_RS13385 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018392|IPR029058 Alpha/Beta hydrolase fold|LysM domain G3DSA:3.10.350.10|G3DSA:3.40.50.1820|PF01476|SM00257|SSF53474|SSF54106 BKD09_RS13390 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011829|IPR019818|IPR024084 Isocitrate/isopropylmalate dehydrogenase, conserved site|Isopropylmalate dehydrogenase-like domain|Tartrate dehydrogenase GO:0000287|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.718.10|PF00180|PS00470|SM01329|SSF53659|TIGR02089 BKD09_RS13395 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS13400 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 BKD09_RS13405 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002811|IPR005106|IPR011182|IPR016040|IPR020626 Aspartate dehydrogenase|Aspartate/homoserine dehydrogenase, NAD-binding|L-aspartate dehydrogenase|L-aspartate dehydrogenase, prokaryotic|NAD(P)-binding domain GO:0006742|GO:0009435|GO:0016491|GO:0019363|GO:0033735|GO:0050661|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_01265|PF01958|PF03447|PIRSF005227|SSF51735|SSF55347 BKD09_RS13410 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011041|IPR011042|IPR012938 Glucose/Sorbosone dehydrogenase|Six-bladed beta-propeller, TolB-like|Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824|GO:0005975|GO:0016901|GO:0048038 G3DSA:2.120.10.30|PF07995|SSF50952 BKD09_RS13425 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021327 Protein of unknown function DUF2934 PF11154 BKD09_RS13435 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007269 Isoprenylcysteine carboxyl methyltransferase GO:0004671|GO:0006481|GO:0016021 PF04140 BKD09_RS13440 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|PF01370|SSF51735 BKD09_RS13445 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009305 Protein of unknown function DUF962 PF06127 BKD09_RS13450 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006664|IPR006665 OmpA-like domain|Outer membrane protein, bacterial GO:0009279|GO:0016021 G3DSA:3.30.1330.60|PF00691|PR01021|SSF103088 BKD09_RS13460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR031807 HicB-like antitoxin of toxin-antitoxin system PF15919|SSF143100 BKD09_RS13465 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013986|IPR014016|IPR014017|IPR027417 DExx box DNA helicase domain|P-loop containing nucleoside triphosphate hydrolase|UvrD-like DNA helicase, C-terminal|UvrD-like Helicase, ATP-binding domain GO:0005524|GO:0016787 G3DSA:1.10.10.160|G3DSA:1.10.486.10|G3DSA:3.40.50.300|PF00580|PF13361|SSF52540 BKD09_RS13470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009760 Protein of unknown function DUF1328 GO:0005886 MF_01361|PF07043|PIRSF036466 BKD09_RS13475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029069 HotDog domain G3DSA:3.10.129.10|PF13279|SSF54637 BKD09_RS13480 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004113|IPR006094|IPR016164|IPR016166|IPR016167|IPR016169|IPR016171 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|FAD-linked oxidase, C-terminal|FAD-linked oxidase-like, C-terminal|Vanillyl-alcohol oxidase, C-terminal subdomain 2 GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:1.10.45.10|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF01565|PF02913|SSF55103|SSF56176 BKD09_RS13485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012899 LTXXQ motif family protein GO:0042597 PF07813 BKD09_RS13495 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR008995|IPR012340|IPR013611|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0016887|GO:0043190 G3DSA:2.40.50.100|G3DSA:2.40.50.140|G3DSA:3.40.50.300|PF00005|PF08402|PS00211|SM00382|SSF50331|SSF52540 BKD09_RS13500 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS13505 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS13510 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.40.190.10|PF13416|SSF53850 BKD09_RS13515 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002645|IPR011547 SLC26A/SulP transporter domain|STAS domain GO:0008272|GO:0015116|GO:0016021 G3DSA:3.30.750.24|PF00916|PF01740|SSF52091 BKD09_RS13520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015917|IPR029030 Caspase-like domain|Peptidase C14A, caspase catalytic domain GO:0006915|GO:0008234 G3DSA:3.40.50.1460|PF00656|SM00115|SSF52129 BKD09_RS13525 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PF03480|SSF53850 BKD09_RS13530 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004681|IPR007387|IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein|Tripartite ATP-independent periplasmic transporter, DctQ component GO:0016021 PF04290|PF06808|TIGR00786 BKD09_RS13535 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006139|IPR006140|IPR016040 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF00389|PF02826|SSF51735|SSF52283 BKD09_RS13540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000709|IPR028081|IPR028082 Leu/Ile/Val-binding protein|Leucine-binding protein domain|Periplasmic binding protein-like I GO:0006865 G3DSA:3.40.50.2300|PF13458|PR00337|SSF53822 BKD09_RS13545 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000160|IPR001633|IPR006189|IPR029787 CHASE domain|EAL domain|GGDEF domain|Nucleotide cyclase G3DSA:3.20.20.450|G3DSA:3.30.70.270|PF00563|PF00990|PF03924|SM00052|SM00267|SM01079|SSF141868|SSF55073|TIGR00254 BKD09_RS13550 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS13555 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR000160|IPR001610|IPR001633|IPR003018|IPR029016|IPR029787 EAL domain|GAF domain|GAF domain-like|GGDEF domain|Nucleotide cyclase|PAC motif|PAS domain GO:0005515 G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.450.40|G3DSA:3.30.70.270|PF00563|PF00990|PF13185|PF13426|PIRSF005925|SM00052|SM00065|SM00086|SM00091|SM00267|SSF141868|SSF55073|SSF55781|SSF55785|TIGR00229|TIGR00254 BKD09_RS13565 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|SM00849|SSF56281 BKD09_RS13570 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000103|IPR023753 FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF07992|PR00368|PR00469|SSF51905 BKD09_RS13580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|SSF46689|SSF48498 BKD09_RS13585 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001128|IPR002397|IPR017972 Cytochrome P450|Cytochrome P450, B-class|Cytochrome P450, conserved site GO:0005506|GO:0016705|GO:0020037|GO:0055114 G3DSA:1.10.630.10|PF00067|PR00359|PS00086|SSF48264 BKD09_RS13590 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007844|IPR017023|IPR032712 AsmA|AsmA-like, C-terminal|Uncharacterised conserved protein UCP034039 PF05170|PF13502|PIRSF034039 BKD09_RS13595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011989|IPR019285 Armadillo-like helical|Protein of unknown function DUF2336 G3DSA:1.25.10.10|PF10098 BKD09_RS13605 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS13610 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00080|PR00081|SM00822|SSF51735 BKD09_RS13615 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893|IPR023772 DNA-binding HTH domain, TetR-type|DNA-binding HTH domain, TetR-type, conserved site|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PR00455|PS01081|SSF46689|SSF48498 BKD09_RS13620 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PIRSF006276|PR01438|SSF52402 BKD09_RS13625 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007339 Protein of unknown function DUF417 PF04224 BKD09_RS13630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13302|SSF55729 BKD09_RS13635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR003594|IPR003661|IPR004358|IPR011006 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PR00344|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55874 BKD09_RS13640 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003593|IPR014774|IPR027417|IPR030665 AAA+ ATPase domain|Circadian clock protein kinase KaiC|KaiC-like domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF06745|PIRSF039117|PR01874|SM00382|SSF52540 BKD09_RS13650 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 BKD09_RS13655 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006073|IPR011619|IPR011640|IPR011642|IPR027417 Ferrous iron transport protein B, C-terminal|Ferrous iron transport protein B, N-terminal|GTP binding domain|Nucleoside transporter/FeoB GTPase, Gate domain|P-loop containing nucleoside triphosphate hydrolase GO:0005525|GO:0015093|GO:0015684|GO:0016021 G3DSA:3.40.50.300|PF02421|PF07664|PF07670|PR00326|SSF52540 BKD09_RS13660 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007167|IPR008988 Ferrous iron transporter FeoA domain|Transcriptional repressor, C-terminal GO:0046914 PF04023|SM00899|SSF50037 BKD09_RS13665 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027373 Ribbon-helix-helix domain PF13467 BKD09_RS13670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025227 Protein of unknown function DUF4169 PF13770 BKD09_RS13675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000362|IPR005677|IPR008948|IPR018951|IPR020557|IPR022761|IPR024083 Fumarase C, C-terminal|Fumarase/histidase, N-terminal|Fumarate hydratase, class II|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0004333|GO:0006099|GO:0006106|GO:0016829|GO:0045239 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|MF_00743|PF00206|PF10415|PR00149|PS00163|SSF48557|TIGR00979 BKD09_RS13680 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007481 Stringent starvation protein B G3DSA:2.30.30.220|PF04386|SSF101738 BKD09_RS13690 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003370 Chromate transporter GO:0015109|GO:0015703 PF02417 BKD09_RS13695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003370 Chromate transporter GO:0015109|GO:0015703 PF02417 BKD09_RS13700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009936 Protein of unknown function DUF1468 PF07331 BKD09_RS13705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002823 Protein of unknown function DUF112, transmembrane PF01970 BKD09_RS13710 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 BKD09_RS13715 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000398|IPR020940|IPR023451 Thymidylate synthase|Thymidylate synthase, active site|Thymidylate synthase/dCMP hydroxymethylase domain GO:0004799|GO:0006231 G3DSA:3.30.572.10|MF_00008|PF00303|PR00108|PS00091|SSF55831|TIGR03284 BKD09_RS13720 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 BKD09_RS13725 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001796|IPR012259|IPR017925|IPR024072 Dihydrofolate reductase|Dihydrofolate reductase conserved site|Dihydrofolate reductase domain|Dihydrofolate reductase-like domain GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 G3DSA:3.40.430.10|PF00186|PIRSF000194|PR00070|PS00075|SSF53597 BKD09_RS13730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001107|IPR010201|IPR020980 Band 7 domain|HflK|Menbrane protein HflK, N-terminal GO:0016021 PF01145|PF12221|SM00244|SSF117892|TIGR01933 BKD09_RS13735 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001107|IPR010200 Band 7 domain|HflC GO:0016021|GO:0052547 PF01145|PIRSF005651|SM00244|SSF117892 BKD09_RS13740 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019201 Protein of unknown function DUF2065 PF09838 BKD09_RS13745 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001478|IPR001940|IPR009003|IPR011782 PDZ domain|Peptidase S1, PA clan|Peptidase S1C|Peptidase S1C, Do GO:0004252|GO:0005515|GO:0006508 G3DSA:2.30.42.10|G3DSA:2.40.10.10|PF13180|PF13365|PR00834|SM00228|SSF50156|SSF50494|TIGR02037 BKD09_RS13750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006383|IPR023190|IPR023214 HAD-like domain|HAD-superfamily hydrolase, subfamily IB, PSPase-like|Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564|GO:0008152|GO:0016791 G3DSA:1.10.150.210|G3DSA:3.40.50.1000|PF12710|SSF56784|TIGR00338|TIGR01488 BKD09_RS13755 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018022|IPR027417 P-loop containing nucleoside triphosphate hydrolase|tRNA dimethylallyltransferase GO:0008033 G3DSA:1.10.287.890|G3DSA:3.40.50.300|MF_00185|PF01715|SSF52540|TIGR00174 BKD09_RS13760 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000399|IPR011766|IPR012000|IPR012001|IPR012846|IPR029035|IPR029061 Acetolactate synthase, large subunit, biosynthetic|DHS-like NAD/FAD-binding domain|TPP-binding enzyme, conserved site|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0003984|GO:0009082|GO:0030976|GO:0050660 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|PS00187|SSF52467|SSF52518|TIGR00118 BKD09_RS13765 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme G3DSA:3.40.50.1100|PF00291|SSF53686 BKD09_RS13770 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002912|IPR004789|IPR019455 ACT domain|Acetolactate synthase, small subunit|Acetolactate synthase, small subunit, C-terminal GO:0003984|GO:0008152|GO:0009082|GO:0016597 G3DSA:3.30.70.1150|G3DSA:3.30.70.260|PD002844|PF01842|PF10369|SSF55021|TIGR00119 BKD09_RS13775 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13649|SSF53335 BKD09_RS13780 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 BKD09_RS13785 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PF01810 BKD09_RS13790 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000506|IPR008927|IPR013023|IPR013116|IPR013328|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|Acetohydroxy acid isomeroreductase C-terminal|Acetohydroxy acid isomeroreductase, NADPH-binding domain|Ketol-acid reductoisomerase|NAD(P)-binding domain GO:0004455|GO:0009082|GO:0016491|GO:0055114 G3DSA:1.10.1040.10|MF_00435|PF01450|PF07991|SSF48179|SSF51735|TIGR00465 BKD09_RS13795 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|SM00822|SSF51735 BKD09_RS13805 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893|IPR025996 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal|WHG domain GO:0003677 G3DSA:1.10.357.10|PF00440|PF13305|SSF46689|SSF48498 BKD09_RS13810 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000917|IPR017849|IPR017850 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Sulfatase, N-terminal GO:0003824|GO:0008152|GO:0008484 G3DSA:3.40.720.10|PF00884|SSF53649 BKD09_RS13815 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR007210 ABC transporter type 1, transmembrane domain MetI-like|ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3720.10|G3DSA:3.40.190.10|G3DSA:3.40.190.120|PF00528|PF04069|SSF161098|SSF53850 BKD09_RS13820 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS13825 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS13830 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS13835 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005183|IPR012347 Domain of unknown function DUF305|Ferritin-related G3DSA:1.20.1260.10|PF03713 BKD09_RS13840 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011045|IPR011964|IPR015943 Nitrous oxide reductase, N-terminal|WD40/YVTN repeat-like-containing domain|YVTN beta-propeller repeat GO:0005515 G3DSA:2.130.10.10|SSF50974|TIGR02276 BKD09_RS13845 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|SSF88659|SSF88946|TIGR02937 BKD09_RS13855 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 BKD09_RS13860 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001638|IPR015168 Solute-binding protein family 3/N-terminal domain of MltF|SsuA/THI5-like G3DSA:3.40.190.10|PF09084|SM00062|SSF53850 BKD09_RS13865 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015797 NUDIX hydrolase domain-like GO:0016787 G3DSA:3.90.79.10|SSF55811 BKD09_RS13870 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS13875 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|SM00382|SSF52540 BKD09_RS13880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|SM00382|SSF52540 BKD09_RS13885 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS13890 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS13895 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016898|IPR022300|IPR022488|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Polyphosphate kinase 2|Polyphosphate kinase-2-related|Polyphosphate:nucleotide phosphotransferase, PPK2 GO:0006797|GO:0016776 G3DSA:3.40.50.300|PF03976|PIRSF028756|SSF52540|TIGR03709 BKD09_RS13900 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002641|IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase|Patatin/Phospholipase A2-related GO:0006629|GO:0008152 PF01734|SSF52151 BKD09_RS13905 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021937 Protein of unknown function DUF3551 PF12071 BKD09_RS13910 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|SM00849|SSF56281 BKD09_RS13920 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006685|IPR010920|IPR011014|IPR011066 LSM domain|Mechanosensitive ion channel MscS|Mechanosensitive ion channel MscS, C-terminal|Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020|GO:0055085 G3DSA:2.30.30.60|G3DSA:3.30.70.100|PF00924|SSF50182|SSF82689|SSF82861 BKD09_RS13925 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 BKD09_RS13930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001891|IPR012301|IPR012302|IPR015884|IPR016040 Malic enzyme, N-terminal domain|Malic enzyme, NAD-binding|Malic enzyme, conserved site|Malic oxidoreductase|NAD(P)-binding domain GO:0004470|GO:0004471|GO:0006108|GO:0051287|GO:0055114 G3DSA:3.40.50.10380|G3DSA:3.40.50.720|PF00390|PF03949|PIRSF000106|PR00072|PS00331|SM00919|SM01274|SSF51735|SSF53223 BKD09_RS13935 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005650|IPR011991 BlaI transcriptional regulatory family|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0045892 G3DSA:1.10.10.10|PF03965|PIRSF019455|SSF46785 BKD09_RS13940 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008756|IPR021860|IPR024053 Peptidase M56|Peptidase S12, Pab87-related, C-terminal|von Hippel-Lindau disease tumour suppressor, beta domain G3DSA:2.60.40.780|PF05569|PF11954 BKD09_RS13945 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001466|IPR001478|IPR012338 Beta-lactamase-related|Beta-lactamase/transpeptidase-like|PDZ domain GO:0005515 G3DSA:2.30.42.10|G3DSA:3.40.710.10|PF00144|PF00595|SM00228|SSF50156|SSF56601 BKD09_RS13950 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014917 Protein of unknown function DUF1800 PF08811 BKD09_RS13955 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010869 Protein of unknown function DUF1501 PF07394 BKD09_RS13965 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009009|IPR012997 Rare lipoprotein A|RlpA-like protein, double-psi beta-barrel domain G3DSA:2.40.40.10|PF03330|SSF50685|TIGR00413 BKD09_RS13980 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013094|IPR023753|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-3|FAD/NAD(P)-binding domain GO:0008152|GO:0016491|GO:0016787|GO:0055114 G3DSA:3.40.50.1820|G3DSA:3.50.50.60|PF07859|PF13738|SSF51905|SSF53474 BKD09_RS13990 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000997|IPR002018|IPR019819|IPR029058 Alpha/Beta hydrolase fold|Carboxylesterase type B, conserved site|Carboxylesterase, type B|Cholinesterase GO:0004104 G3DSA:3.40.50.1820|PF00135|PR00878|PS00941|SSF53474 BKD09_RS14000 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004183|IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type|Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0008270|GO:0016491|GO:0016701|GO:0055114 G3DSA:3.40.830.10|PF02900|PIRSF006157|SSF53213 BKD09_RS14010 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 G3DSA:3.40.50.1580|PF01048|SSF53167 BKD09_RS14015 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002125|IPR016193 Cytidine and deoxycytidylate deaminases, zinc-binding|Cytidine deaminase-like GO:0003824|GO:0008270 G3DSA:3.40.140.10|PF00383|SSF53927 BKD09_RS14020 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006603 PQ-loop repeat PF04193 BKD09_RS14025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001296|IPR011835|IPR013534 Bacterial/plant glycogen synthase|Glycosyl transferase, family 1|Starch synthase, catalytic domain GO:0004373 G3DSA:3.40.50.2000|MF_00484|PF00534|PF08323|SSF53756|TIGR02095 BKD09_RS14030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005835|IPR005836|IPR011004|IPR011831|IPR023049|IPR029044 ADP-glucose pyrophosphorylase, conserved site|Glucose-1-phosphate adenylyltransferase|Glucose-1-phosphate adenylyltransferase GlgC, bacterial|Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain|Trimeric LpxA-like GO:0005978|GO:0008878|GO:0009058|GO:0016779 G3DSA:3.90.550.10|MF_00624|PF00483|PS00808|PS00809|PS00810|SSF51161|SSF53448|TIGR02091 BKD09_RS14040 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001638|IPR010067|IPR015168 Aliphatic sulfonates-binding protein|Solute-binding protein family 3/N-terminal domain of MltF|SsuA/THI5-like GO:0006790|GO:0006810|GO:0016020 G3DSA:3.40.190.10|PF09084|SM00062|SSF53850|TIGR01728 BKD09_RS14045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.40.190.10|PF13379|SSF53850 BKD09_RS14050 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS14055 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS14060 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006091|IPR009075|IPR009100|IPR013107|IPR013786 Acyl-CoA dehydrogenase, C-terminal domain|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF02770|PF02771|PF08028|SSF47203|SSF56645 BKD09_RS14065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011251 Luciferase-like domain GO:0016705|GO:0055114 G3DSA:3.20.20.30|PF00296|SSF51679 BKD09_RS14070 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001638|IPR010067|IPR015168 Aliphatic sulfonates-binding protein|Solute-binding protein family 3/N-terminal domain of MltF|SsuA/THI5-like GO:0006790|GO:0006810|GO:0016020 G3DSA:3.40.190.10|PF09084|SM00062|SSF53850|TIGR01728 BKD09_RS14080 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009009 RlpA-like protein, double-psi beta-barrel domain PF03330|SSF50685 BKD09_RS14085 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000683|IPR016040 NAD(P)-binding domain|Oxidoreductase, N-terminal GO:0016491 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01408|SSF51735|SSF55347 BKD09_RS14090 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002559|IPR008490 Transposase InsH, N-terminal|Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PF01609|PF05598 BKD09_RS14095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS14100 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001077|IPR011991|IPR016461|IPR029063|IPR031725 Acetylserotonin O-methyltransferase, dimerisation domain|O-methyltransferase COMT-type|O-methyltransferase, family 2|S-adenosyl-L-methionine-dependent methyltransferase|Winged helix-turn-helix DNA-binding domain GO:0008168|GO:0008171 G3DSA:1.10.10.10|G3DSA:3.40.50.150|PF00891|PF16864|PIRSF005739|SSF46785|SSF53335 BKD09_RS14105 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS14110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS14115 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS14120 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS14125 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS14130 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006076|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01266|SSF51905 BKD09_RS14135 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010255|IPR011049|IPR019791 Haem peroxidase|Haem peroxidase, animal|Serralysin-like metalloprotease, C-terminal GO:0004601|GO:0006979|GO:0020037|GO:0055114 G3DSA:1.10.640.10|G3DSA:2.150.10.10|PF03098|PR00457|SSF48113|SSF51120 BKD09_RS14140 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011042|IPR013658 SMP-30/Gluconolactonase/LRE-like region|Six-bladed beta-propeller, TolB-like G3DSA:2.120.10.30|PF08450|SSF63829 BKD09_RS14150 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000891|IPR002034|IPR005671|IPR013709|IPR013785 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain|2-isopropylmalate synthase, bacterial-type|Aldolase-type TIM barrel|Alpha-isopropylmalate/homocitrate synthase, conserved site|Pyruvate carboxyltransferase GO:0003824|GO:0003852|GO:0009098|GO:0019752|GO:0046912 G3DSA:3.20.20.70|MF_01025|PF00682|PF08502|PS00815|PS00816|SM00917|SSF110921|SSF51569|TIGR00973 BKD09_RS14155 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000123|IPR000477|IPR013597|IPR030931 Group II intron reverse transcriptase/maturase|Group II intron, maturase-specific|RNA-directed DNA polymerase (reverse transcriptase), msDNA|Reverse transcriptase domain GO:0003723|GO:0003964|GO:0006278 PF00078|PF08388|PR00866|SSF56672|TIGR04416 BKD09_RS14160 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012332|IPR030930 Adhesin of bacterial autotransporter system|P22 tailspike C-terminal domain-like G3DSA:2.160.20.20|SSF141072|TIGR04415 BKD09_RS14165 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004682|IPR018389 TRAP transporter solute receptor DctP/TeaA|TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 PF03480|PIRSF006470|TIGR00787 BKD09_RS14170 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012899 LTXXQ motif family protein GO:0042597 PF07813 BKD09_RS14190 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012337|IPR019993|IPR027417 P-loop containing nucleoside triphosphate hydrolase|RecB family nuclease, TM0106, putative|Ribonuclease H-like domain GO:0003676 G3DSA:3.40.50.300|PF13087|PF13482|PF13604|SSF52540|TIGR03491 BKD09_RS14215 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 G3DSA:3.40.50.200|PF00082|SSF52743 BKD09_RS14220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003593|IPR003959|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF00004|SM00382|SSF52540 BKD09_RS14225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000594|IPR016040 NAD(P)-binding domain|THIF-type NAD/FAD binding fold GO:0008641 G3DSA:3.40.50.720|PF00899|SSF69572 BKD09_RS14240 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027802 Multi-ubiquitin domain PF14452 BKD09_RS14245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413 BKD09_RS14250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010359 HTH domain, IrrE-type PF06114 BKD09_RS14255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001126|IPR017961|IPR022880 DNA polymerase IV|DNA polymerase, Y-family, little finger domain|UmuC domain GO:0003684|GO:0003887|GO:0006281 G3DSA:1.10.150.20|G3DSA:3.30.1490.100|G3DSA:3.30.70.270|MF_01113|PF00817|PF11799|SSF100879|SSF56672 BKD09_RS14260 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003738 SOS response associated peptidase (SRAP) G3DSA:3.90.1680.10|PF02586|SSF143081 BKD09_RS14275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006164|IPR009187|IPR016194 Ku70/Ku80 beta-barrel domain|Non-homologous end joining protein Ku, prokaryotic type|SPOC-like, C-terminal domain GO:0003677|GO:0006303 G3DSA:2.40.290.10|MF_01875|PF02735|PIRSF006493|SM00559|SSF100939|TIGR02772 BKD09_RS14295 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013610|IPR017113 Antirestriction, ArdC|Domain of unknown function DUF1738 PF08401|PIRSF037112 BKD09_RS14300 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003115 ParB/Sulfiredoxin G3DSA:3.90.1530.10|PF02195|SM00470|SSF109709|SSF110849 BKD09_RS14305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR026937|IPR027417|IPR029063 P-loop containing nucleoside triphosphate hydrolase|S-adenosyl-L-methionine-dependent methyltransferase|Strawberry notch, helicase C domain G3DSA:3.40.50.150|G3DSA:3.40.50.300|PF13871|PF13872|SSF52540|SSF53335 BKD09_RS14310 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006171 Toprim domain PF13362 BKD09_RS14315 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019627 Mycobacteriophage D29, Gp61 PF10686 BKD09_RS14325 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007948 Protein of unknown function DUF736 PF05284 BKD09_RS14330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413 BKD09_RS14345 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018754 Protein of unknown function DUF2285 PF10074 BKD09_RS14350 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009061|IPR011991 Putative DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF12728|SSF46955 BKD09_RS14355 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018777 Replication initiator protein A PF10134 BKD09_RS14360 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021263 Protein of unknown function DUF2840 PF11000 BKD09_RS14365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015927|IPR019533|IPR028360 Peptidase S24/S26, beta-ribbon domain|Peptidase S24/S26A/S26B/S26C|Peptidase S26 G3DSA:2.10.109.10|PF10502|SSF51306 BKD09_RS14370 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008258|IPR023346 Lysozyme-like domain|Transglycosylase SLT domain 1 G3DSA:1.10.530.10|PF01464|SSF53955 BKD09_RS14375 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021795 Protein of unknown function DUF3363 PF11843 BKD09_RS14380 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003688|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 G3DSA:3.40.50.300|PF02534|SSF52540 BKD09_RS14385 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008258|IPR023346 Lysozyme-like domain|Transglycosylase SLT domain 1 G3DSA:1.10.530.10|PF01464|SSF53955 BKD09_RS14395 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002104|IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|SSF56349 BKD09_RS14415 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002068|IPR008978 Alpha crystallin/Hsp20 domain|HSP20-like chaperone G3DSA:2.60.40.790|PF00011|SSF49764 BKD09_RS14420 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012309|IPR012310|IPR012340|IPR014146 DNA ligase D, ligase domain|DNA ligase, ATP-dependent, C-terminal|DNA ligase, ATP-dependent, central|Nucleic acid-binding, OB-fold GO:0003910|GO:0005524|GO:0006281|GO:0006310 G3DSA:2.40.50.140|G3DSA:3.30.1490.70|G3DSA:3.30.470.30|PF01068|PF04679|SSF50249|SSF56091|TIGR02779 BKD09_RS14440 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009642 Protein of unknown function DUF1236 PF06823 BKD09_RS14460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 BKD09_RS14465 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 BKD09_RS14475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000086|IPR015797 NUDIX hydrolase domain|NUDIX hydrolase domain-like GO:0016787 G3DSA:3.90.79.10|PF00293|SSF55811 BKD09_RS14495 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025161 Putative transposase IS4/IS5 family PF13340 BKD09_RS14520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|SM00421|SM00448|SSF46894|SSF52172 BKD09_RS14540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00196|SM00421|SSF46894 BKD09_RS14565 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011852 TRAP transporter solute receptor, TAXI family G3DSA:3.40.190.10|PF16868|SSF53850 BKD09_RS14570 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002549 Transmembrane protein TqsA-like PF01594 BKD09_RS14575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011033|IPR027275 PRC-barrel domain|PRC-barrel-like G3DSA:2.30.30.240|PF05239|SSF50346 BKD09_RS14585 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|SM00421|SM00448|SSF46894|SSF52172 BKD09_RS14590 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003594|IPR011712 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 G3DSA:3.30.565.10|PF07730|SSF55874 BKD09_RS14595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009959|IPR032710 NTF2-like domain|Polyketide cyclase SnoaL-like domain G3DSA:3.10.450.50|PF12680|SSF54427 BKD09_RS14605 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009642 Protein of unknown function DUF1236 PF06823 BKD09_RS14610 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011102|IPR025847 MEDS domain|Signal transduction histidine kinase, HWE region GO:0004673 PF07536|PF14417|SM00911 BKD09_RS14625 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009642 Protein of unknown function DUF1236 PF06823 BKD09_RS14650 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007444|IPR011013|IPR013783|IPR014438|IPR014718|IPR014756|IPR023704 Galactose mutarotase-like domain|Glucan biosynthesis protein G|Glucan biosynthesis, periplasmic, MdoG C-terminal|Glucan biosynthesis, periplasmic, MdoG/D|Glycoside hydrolase-type carbohydrate-binding|Immunoglobulin E-set|Immunoglobulin-like fold GO:0003824|GO:0005975|GO:0016051|GO:0030246|GO:0042597 G3DSA:2.60.40.10|G3DSA:2.70.98.10|MF_01069|PF04349|PIRSF006281|SSF74650|SSF81296 BKD09_RS14655 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001173|IPR023725|IPR029044 Glucan biosynthesis glucosyltransferase H|Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases GO:0016758 G3DSA:3.90.550.10|MF_01072|PF13632|SSF53448 BKD09_RS14660 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010985 Ribbon-helix-helix GO:0006355 SSF47598 BKD09_RS14665 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010126|IPR029058 Alpha/Beta hydrolase fold|Esterase, PHB depolymerase GO:0005576|GO:0016787 G3DSA:3.40.50.1820|PF10503|SSF53474|TIGR01840 BKD09_RS14670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR003594|IPR003661|IPR004358|IPR013767 Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0006355|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF00989|PF02518|PR00344|SM00387|SM00388|SSF47384|SSF55785|SSF55874|TIGR00229 BKD09_RS14675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|SSF53474 BKD09_RS14685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021327 Protein of unknown function DUF2934 PF11154 BKD09_RS14695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase G3DSA:1.20.144.10|PF01569|SM00014|SSF48317 BKD09_RS14700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 BKD09_RS14705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002931|IPR013589 Bacterial transglutaminase-like, N-terminal|Transglutaminase-like G3DSA:3.90.260.10|PF01841|PF08379|SM00460|SSF54001 BKD09_RS14720 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009078|IPR010287|IPR012347 Domain of unknown function DUF892|Ferritin-like superfamily|Ferritin-related G3DSA:1.20.1260.10|PF05974|SSF47240 BKD09_RS14730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015421|IPR015424 Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 G3DSA:3.40.640.10|SSF53383 BKD09_RS14735 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011032|IPR013149|IPR013154|IPR016040|IPR027399 Alcohol dehydrogenase GroES-associated|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PF13823|SSF50129|SSF51735 BKD09_RS14740 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00081|PS00061|SSF51735 BKD09_RS14750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SSF53041 BKD09_RS14755 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009282|IPR027405 Protein of unknown function DUF937|YidB-like G3DSA:1.10.10.690|PF06078|SSF140804 BKD09_RS14770 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009937 Putative Actinobacterial Holin-X, holin superfamily III PF07332 BKD09_RS14825 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027843|IPR032710 Domain of unknown function DUF4440|NTF2-like domain G3DSA:3.10.450.50|PF14534|SSF54427 BKD09_RS14830 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|SSF53756 BKD09_RS14835 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002477|IPR005490 L,D-transpeptidase catalytic domain|Peptidoglycan binding-like GO:0016740 G3DSA:1.10.101.10|G3DSA:2.40.440.10|PF03734|SSF141523|SSF47090 BKD09_RS14845 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007341 Transglycosylase-associated protein GO:0016021 PF04226 BKD09_RS14850 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009282|IPR027405 Protein of unknown function DUF937|YidB-like G3DSA:1.10.10.690|PF06078|SSF140804 BKD09_RS14860 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025711 PepSY domain PF13670 BKD09_RS14865 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000399|IPR011766|IPR012000|IPR012001|IPR029035|IPR029061 DHS-like NAD/FAD-binding domain|TPP-binding enzyme, conserved site|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0030976 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|PS00187|SSF52467|SSF52518 BKD09_RS14870 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023210 NADP-dependent oxidoreductase domain G3DSA:3.20.20.100|PF00248|SSF51430 BKD09_RS14875 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR017871|IPR027417 ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:1.10.8.280|G3DSA:1.20.1580.10|G3DSA:3.40.50.300|PF00005|PS00211|SSF52540 BKD09_RS14935 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|SM00421|SSF46894|SSF52172 BKD09_RS14960 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000415|IPR029479 Nitroreductase|Nitroreductase-like GO:0016491 G3DSA:3.40.109.10|PF00881|SSF55469 BKD09_RS14970 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 PF04966 BKD09_RS14975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007251 Low affinity iron permease, Fet4 GO:0055085 PF04120 BKD09_RS14980 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010406 Protein of unknown function DUF1003 PF06210 BKD09_RS14990 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021327 Protein of unknown function DUF2934 PF11154 BKD09_RS14995 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13481|SSF52540 BKD09_RS15010 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012347|IPR025419 Domain of unknown function DUF4142|Ferritin-related G3DSA:1.20.1260.10|PF13628 BKD09_RS15015 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002059|IPR011129|IPR012156|IPR012340|IPR019844 Cold shock protein|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|SM00357|SSF50249 BKD09_RS15025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011037|IPR015808 Molybdenum cofactor sulfurase, C-terminal-like|Pyruvate kinase-like, insert domain G3DSA:2.40.33.20|SSF50800 BKD09_RS15030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR017039 Virulence factor BrkB PF03631|TIGR00765 BKD09_RS15045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009078|IPR010287|IPR012347 Domain of unknown function DUF892|Ferritin-like superfamily|Ferritin-related G3DSA:1.20.1260.10|PF05974|SSF47240 BKD09_RS15050 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002549 Transmembrane protein TqsA-like PF01594 BKD09_RS15065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF16242|SSF50475 BKD09_RS15070 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR024064 FdhE-like G3DSA:3.90.1670.10 BKD09_RS15085 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002068|IPR008978 Alpha crystallin/Hsp20 domain|HSP20-like chaperone G3DSA:2.60.40.790|PF00011|SSF49764 BKD09_RS15115 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00196|SM00421|SSF46894 BKD09_RS15125 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025161 Putative transposase IS4/IS5 family PF13340 BKD09_RS15150 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003594|IPR003661|IPR004358|IPR025751 Histidine kinase-like ATPase, C-terminal domain|RsbT co-antagonist protein RsbRD, N-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF02518|PF14361|PR00344|SM00387|SM00388|SSF47384|SSF55874 BKD09_RS15175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019219 Protein of unknown function DUF2130 PF09903|PIRSF005850 BKD09_RS15195 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 BKD09_RS15200 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009959|IPR032710 NTF2-like domain|Polyketide cyclase SnoaL-like domain G3DSA:3.10.450.50|PF12680|SSF54427 BKD09_RS15220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PS00622|SM00421|SM00448|SSF46894|SSF52172 BKD09_RS15225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|PAS domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF02518|PR00344|SM00387|SM00388|SSF47384|SSF55785|SSF55874|TIGR00229 BKD09_RS15240 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003018|IPR029016 GAF domain|GAF domain-like GO:0005515 G3DSA:3.30.450.40|PF01590|SSF55781 BKD09_RS15245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025847 MEDS domain PF14417 BKD09_RS15250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004602|IPR017871|IPR027417 ABC transporter, conserved site|P-loop containing nucleoside triphosphate hydrolase|UvrABC system subunit A GO:0005524|GO:0006289|GO:0009380|GO:0009381|GO:0016887 G3DSA:1.10.8.280|G3DSA:1.20.1580.10|G3DSA:3.40.50.300|PS00211|SSF52540|TIGR00630 BKD09_RS15255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007138|IPR011008 Antibiotic biosynthesis monooxygenase domain|Dimeric alpha-beta barrel G3DSA:3.30.70.900|PF03992|SSF54909 BKD09_RS15260 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR018297|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|Adenylyl cyclase class-4/guanylyl cyclase, conserved site|Nucleotide cyclase GO:0009190|GO:0016849|GO:0035556 G3DSA:3.30.70.1230|PF00211|PS00452|SM00044|SSF55073 BKD09_RS15265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000674|IPR008274 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF01315|PF02738|SM01008|SSF54665|SSF56003 BKD09_RS15270 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002346|IPR005107|IPR016166|IPR016167|IPR016169 CO dehydrogenase flavoprotein, C-terminal|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|Molybdopterin dehydrogenase, FAD-binding GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.30.390.50|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF00941|PF03450|SM01092|SSF55447|SSF56176 BKD09_RS15275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001041|IPR002888|IPR006058|IPR012675 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|[2Fe-2S]-binding GO:0009055|GO:0016491|GO:0046872|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.150.120|G3DSA:3.10.20.30|PF00111|PF01799|PS00197|SSF47741|SSF54292 BKD09_RS15280 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001270|IPR003593|IPR003959|IPR004176|IPR017730|IPR018368|IPR019489|IPR027417|IPR028299 AAA+ ATPase domain|ATPase, AAA-type, core|Chaperonin ClpB|Clp ATPase, C-terminal|Clp, N-terminal|ClpA/B family|ClpA/B, conserved site 1|ClpA/B, conserved site 2|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0005737|GO:0009408|GO:0016485|GO:0019538 G3DSA:1.10.1780.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00004|PF02861|PF07724|PF10431|PR00300|PS00870|PS00871|SM00382|SM01086|SSF52540|SSF81923|TIGR03346 BKD09_RS15285 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015590|IPR016160|IPR016161|IPR016162|IPR016163|IPR029510 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|PS00687|SSF53720 BKD09_RS15290 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000103|IPR000595|IPR014710|IPR018490|IPR023753 Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, class-II|RmlC-like jelly roll fold GO:0016491|GO:0055114 G3DSA:2.60.120.10|G3DSA:3.50.50.60|PF00027|PF07992|PR00368|PR00469|SM00100|SSF51206|SSF51905 BKD09_RS15295 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009072|IPR015207 Histone-fold|Protein of unknown function DUF1931 GO:0046982 G3DSA:1.10.20.10|PF09123|SSF47113 BKD09_RS15300 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR020471|IPR023210 Aldo/keto reductase|NADP-dependent oxidoreductase domain GO:0016491|GO:0055114 G3DSA:3.20.20.100|PF00248|PIRSF000097|PR00069|SSF51430 BKD09_RS15305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005746|IPR012336|IPR013766|IPR017937 Thioredoxin|Thioredoxin domain|Thioredoxin, conserved site|Thioredoxin-like fold GO:0006662|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00085|PR00421|PS00194|SSF52833|TIGR01068 BKD09_RS15315 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|PF01370|SSF51735 BKD09_RS15320 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000674|IPR008274 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF01315|PF02738|SM01008|SSF54665|SSF56003 BKD09_RS15325 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002346|IPR005107|IPR016166|IPR016167|IPR016169 CO dehydrogenase flavoprotein, C-terminal|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|Molybdopterin dehydrogenase, FAD-binding GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.30.390.50|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF00941|PF03450|SM01092|SSF55447|SSF56176 BKD09_RS15330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001041|IPR002888|IPR006058|IPR012675 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|[2Fe-2S]-binding GO:0009055|GO:0016491|GO:0046872|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.150.120|G3DSA:3.10.20.30|PF00111|PF01799|PS00197|SSF47741|SSF54292 BKD09_RS15335 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002177|IPR008331|IPR009078|IPR012347 DNA-binding protein Dps|Ferritin-like superfamily|Ferritin-related|Ferritin/DPS protein domain GO:0006879|GO:0006950|GO:0008199|GO:0055114 G3DSA:1.20.1260.10|PF00210|PIRSF005900|PR01346|SSF47240 BKD09_RS15340 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019291 Host attachment protein PF10116 BKD09_RS15345 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001792|IPR007024 Acylphosphatase-like domain|BLUF domain GO:0009882|GO:0071949 PF04940|SM01034|SSF54975 BKD09_RS15355 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR001610|IPR003018|IPR011102|IPR029016 GAF domain|GAF domain-like|PAC motif|PAS domain|Signal transduction histidine kinase, HWE region GO:0004673|GO:0005515 G3DSA:3.30.450.20|G3DSA:3.30.450.40|PF07536|PF13185|PF13426|SM00065|SM00086|SM00091|SM00911|SSF55781|SSF55785|TIGR00229 BKD09_RS15360 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 BKD09_RS15370 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001155|IPR013785 Aldolase-type TIM barrel|NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0003824|GO:0010181|GO:0016491|GO:0055114 G3DSA:3.20.20.70|PF00724|SSF51395 BKD09_RS15385 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:1.10.1660.10|PF13591 BKD09_RS15390 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001623|IPR002939|IPR008971|IPR018253 Chaperone DnaJ, C-terminal|DnaJ domain|DnaJ domain, conserved site|HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 G3DSA:1.10.287.110|G3DSA:2.60.260.20|PF00226|PF01556|PR00625|PS00636|SM00271|SSF46565|SSF49493 BKD09_RS15395 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000740|IPR009012|IPR013805 GrpE nucleotide exchange factor|GrpE nucleotide exchange factor, coiled-coil|GrpE nucleotide exchange factor, head GO:0000774|GO:0006457|GO:0042803|GO:0051087 G3DSA:2.30.22.10|G3DSA:3.90.20.20|MF_01151|PF01025|PR00773|PS01071|SSF51064|SSF58014 BKD09_RS15400 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012725|IPR013126|IPR018181|IPR029047|IPR029048 Chaperone DnaK|Heat shock protein 70 family|Heat shock protein 70, conserved site|Heat shock protein 70kD, C-terminal domain|Heat shock protein 70kD, peptide-binding domain GO:0005524|GO:0006457|GO:0051082 G3DSA:1.20.1270.10|G3DSA:2.60.34.10|G3DSA:3.30.30.30|G3DSA:3.30.420.40|G3DSA:3.90.640.10|MF_00332|PF00012|PR00301|PS00297|PS00329|PS01036|SSF100920|SSF100934|SSF53067|TIGR02350 BKD09_RS15405 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002068|IPR008978 Alpha crystallin/Hsp20 domain|HSP20-like chaperone G3DSA:2.60.40.790|PF00011|SSF49764 BKD09_RS15410 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007055|IPR014004 BON domain|Transport-associated and nodulation domain, bacteria PF04972|SM00749 BKD09_RS15420 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011033|IPR027275 PRC-barrel domain|PRC-barrel-like G3DSA:2.30.30.240|PF05239|SSF50346 BKD09_RS15425 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF13545|PR00034|SM00419|SSF46785|SSF51206 BKD09_RS15430 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002818|IPR006286|IPR029062 Class I glutamine amidotransferase-like|DJ-1/PfpI|Peptidase C56, PfpI G3DSA:3.40.50.880|PF01965|SSF52317|TIGR01382 BKD09_RS15440 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005325 Protein of unknown function DUF308, membrane PF03729 BKD09_RS15450 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011032|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF08240|PF13602|SM00829|SSF50129|SSF51735 BKD09_RS15455 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PR01438|SSF52402 BKD09_RS15460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002549 Transmembrane protein TqsA-like PF01594 BKD09_RS15465 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR020948 Phosphate-starvation-induced PsiE-like PF06146 BKD09_RS15470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011033|IPR027275 PRC-barrel domain|PRC-barrel-like G3DSA:2.30.30.240|PF05239|SSF50346 BKD09_RS15475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003313|IPR009057|IPR018060 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PF14525|SM00342|SSF46689 BKD09_RS15500 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001236|IPR001557|IPR015955|IPR016040|IPR022383 L-lactate/malate dehydrogenase|Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal|Lactate/malate dehydrogenase, C-terminal|Lactate/malate dehydrogenase, N-terminal|NAD(P)-binding domain GO:0003824|GO:0005975|GO:0016491|GO:0016616|GO:0019752|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.110.10|PF00056|PF02866|PIRSF000102|PR00086|SSF51735|SSF56327 BKD09_RS15505 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00196|PR00038|PS00622|SM00421|SSF46894 BKD09_RS15515 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011032|IPR013149|IPR013154|IPR014182|IPR016040|IPR020843 Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|Alcohol dehydrogenase, zinc-binding type 1|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|SM00829|SSF50129|SSF51735|TIGR02817 BKD09_RS15535 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001792|IPR007024 Acylphosphatase-like domain|BLUF domain GO:0009882|GO:0071949 PF04940|SM01034|SSF54975 BKD09_RS15540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018691 Protein of unknown function DUF2188 PF09954 BKD09_RS15550 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003313|IPR009057|IPR018060 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PF14525|SM00342|SSF46689 BKD09_RS15555 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002068|IPR008978 Alpha crystallin/Hsp20 domain|HSP20-like chaperone G3DSA:2.60.40.790|PF00011|SSF49764 BKD09_RS15560 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007055|IPR014004 BON domain|Transport-associated and nodulation domain, bacteria PF04972|SM00749 BKD09_RS15565 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002818|IPR029062 Class I glutamine amidotransferase-like|DJ-1/PfpI G3DSA:3.40.50.880|PF01965|SSF52317 BKD09_RS15570 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PR01438|SSF52402 BKD09_RS15580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001844|IPR002423|IPR018370|IPR027409|IPR027413 Chaperonin Cpn60|Chaperonin Cpn60, conserved site|Chaperonin Cpn60/TCP-1 family|GroEL-like apical domain|GroEL-like equatorial domain GO:0005524|GO:0005737|GO:0006457|GO:0042026 G3DSA:1.10.560.10|G3DSA:3.50.7.10|MF_00600|PF00118|PR00298|PS00296|SSF48592|SSF52029|SSF54849|TIGR02348 BKD09_RS15585 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011032|IPR018369|IPR020818 Chaperonin GroES, conserved site|GroES chaperonin family|GroES-like GO:0005524|GO:0005737|GO:0006457 G3DSA:2.30.33.40|MF_00580|PF00166|PR00297|PS00681|SM00883|SSF50129 BKD09_RS15590 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic PD072590 BKD09_RS15595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR022254 Protein of unknown function DUF3775 PF12616 BKD09_RS15600 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003111|IPR003593|IPR003959|IPR004815|IPR008268|IPR008269|IPR014721|IPR015947|IPR020568|IPR027417|IPR027543 AAA+ ATPase domain|ATP-dependent protease La (LON), substrate-binding domain|ATPase, AAA-type, core|Lon protease, bacterial|Lon protease, bacterial/eukaryotic-type|P-loop containing nucleoside triphosphate hydrolase|PUA-like domain|Peptidase S16, Lon C-terminal|Peptidase S16, active site|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 G3DSA:1.10.8.60|G3DSA:3.30.230.10|G3DSA:3.40.50.300|MF_01973|PF00004|PF02190|PF05362|PIRSF001174|PR00830|PS01046|SM00382|SM00464|SSF52540|SSF54211|SSF88697|TIGR00763 BKD09_RS15605 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002068|IPR008978 Alpha crystallin/Hsp20 domain|HSP20-like chaperone G3DSA:2.60.40.790|PF00011|SSF49764 BKD09_RS15615 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011041|IPR011042|IPR012938 Glucose/Sorbosone dehydrogenase|Six-bladed beta-propeller, TolB-like|Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824|GO:0005975|GO:0016901|GO:0048038 G3DSA:2.120.10.30|PF07995|SSF50952 BKD09_RS15625 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011766|IPR012000|IPR012001|IPR029035|IPR029061 DHS-like NAD/FAD-binding domain|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0030976 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|SSF52467|SSF52518 BKD09_RS15630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010617 Endosomal/lysomomal potassium channel TMEM175 GO:0005267 PF06736 BKD09_RS15640 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|SSF52402 BKD09_RS15645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013901 Protein of unknown function DUF1772 PF08592 BKD09_RS15655 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011041|IPR011042|IPR012938 Glucose/Sorbosone dehydrogenase|Six-bladed beta-propeller, TolB-like|Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824|GO:0005975|GO:0016901|GO:0048038 G3DSA:2.120.10.30|PF07995|SSF50952 BKD09_RS15660 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015590|IPR016160|IPR016161|IPR016162|IPR016163 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|SSF53720 BKD09_RS15665 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006115|IPR008927|IPR013328|IPR015815|IPR016040|IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain|3-hydroxyisobutyrate dehydrogenase-related|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, NADP-binding|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0004616|GO:0016491|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF03446|PF14833|PIRSF000103|SSF48179|SSF51735 BKD09_RS15670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003855|IPR023051 Potassium transporter|Potassium uptake protein, low affinity, Kup GO:0015079|GO:0016020|GO:0071805 MF_01522|PF02705 BKD09_RS15685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011033 PRC-barrel-like SSF50346 BKD09_RS15705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 G3DSA:3.30.360.10|PF02781|SSF55347 BKD09_RS15730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic PF01027 BKD09_RS15735 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011251|IPR019949 Luciferase family oxidoreductase, group 1|Luciferase-like domain GO:0016705|GO:0055114 G3DSA:3.20.20.30|PF00296|SSF51679|TIGR03558 BKD09_RS15740 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 BKD09_RS15745 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000943|IPR007627|IPR007630|IPR009042|IPR011991|IPR012759|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor RpoH, proteobacteria|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 1.2|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 4|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.601.10|PF00140|PF04542|PF04545|PR00046|PS00715|PS00716|SSF88659|SSF88946|TIGR02392|TIGR02937 BKD09_RS15755 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002068|IPR008978 Alpha crystallin/Hsp20 domain|HSP20-like chaperone G3DSA:2.60.40.790|PF00011|SSF49764 BKD09_RS15760 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011032|IPR018369|IPR020818 Chaperonin GroES, conserved site|GroES chaperonin family|GroES-like GO:0005524|GO:0005737|GO:0006457 G3DSA:2.30.33.40|MF_00580|PF00166|PR00297|PS00681|SM00883|SSF50129 BKD09_RS15765 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001844|IPR002423|IPR018370|IPR027409|IPR027413 Chaperonin Cpn60|Chaperonin Cpn60, conserved site|Chaperonin Cpn60/TCP-1 family|GroEL-like apical domain|GroEL-like equatorial domain GO:0005524|GO:0005737|GO:0006457|GO:0042026 G3DSA:1.10.560.10|G3DSA:3.50.7.10|MF_00600|PF00118|PR00298|PS00296|SSF48592|SSF52029|SSF54849|TIGR02348 BKD09_RS15780 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002068|IPR008978 Alpha crystallin/Hsp20 domain|HSP20-like chaperone G3DSA:2.60.40.790|PF00011|SSF49764 BKD09_RS15785 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002068|IPR008978 Alpha crystallin/Hsp20 domain|HSP20-like chaperone G3DSA:2.60.40.790|PF00011|SSF49764 BKD09_RS15795 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001478|IPR001940|IPR009003 PDZ domain|Peptidase S1, PA clan|Peptidase S1C GO:0004252|GO:0005515|GO:0006508 G3DSA:2.30.42.10|G3DSA:2.40.10.10|PF13180|PF13365|PR00834|SM00228|SSF50156|SSF50494 BKD09_RS15800 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS15805 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007400 PrpF protein G3DSA:3.10.310.10|PF04303|SSF54506 BKD09_RS15810 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001991|IPR018107 Sodium:dicarboxylate symporter|Sodium:dicarboxylate symporter, conserved site GO:0015293|GO:0016021 G3DSA:1.10.3860.10|PF00375|PR00173|PS00713|PS00714|SSF118215 BKD09_RS15820 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR000639|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Epoxide hydrolase-like GO:0003824 G3DSA:3.40.50.1820|PF00561|PR00111|PR00412|SSF53474 BKD09_RS15835 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 BKD09_RS15840 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR001610|IPR003018|IPR003594|IPR011495|IPR013656|IPR013767|IPR029016 GAF domain|GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold|PAS fold-4|Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain GO:0005515|GO:0006355 G3DSA:3.30.450.20|G3DSA:3.30.450.40|G3DSA:3.30.565.10|PF00989|PF07568|PF08448|PF13185|PF13581|SM00065|SM00086|SM00091|SM00387|SSF55781|SSF55785|SSF55874|TIGR00229 BKD09_RS15845 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 PF04966 BKD09_RS15850 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021493 Protein of unknown function DUF3147 PF11345 BKD09_RS15855 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021493 Protein of unknown function DUF3147 PF11345 BKD09_RS15860 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase G3DSA:1.20.144.10|PF01569|SSF48317 BKD09_RS15865 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|PF00857|SSF52499 BKD09_RS15870 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 G3DSA:3.90.80.10|PF00719|PS00387|SSF50324 BKD09_RS15875 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009078|IPR010287|IPR012347 Domain of unknown function DUF892|Ferritin-like superfamily|Ferritin-related G3DSA:1.20.1260.10|PF05974|SSF47240 BKD09_RS15880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006076|IPR017941|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain|Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 G3DSA:2.102.10.10|G3DSA:3.50.50.60|PF00355|PF01266|PR00419|SSF50022|SSF51905 BKD09_RS15885 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006076|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01266|SSF51905 BKD09_RS15900 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009642 Protein of unknown function DUF1236 PF06823 BKD09_RS15920 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|SSF53756 BKD09_RS15925 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010985|IPR013321 Arc-type ribbon-helix-helix|Ribbon-helix-helix GO:0006355 G3DSA:1.10.1220.10|SSF47598 BKD09_RS15930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010126|IPR029058 Alpha/Beta hydrolase fold|Esterase, PHB depolymerase GO:0005576|GO:0016787 G3DSA:3.40.50.1820|PF10503|SSF53474|TIGR01840 BKD09_RS15935 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 BKD09_RS15940 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011033|IPR027275 PRC-barrel domain|PRC-barrel-like G3DSA:2.30.30.240|PF05239|SSF50346 BKD09_RS15950 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002068|IPR008978 Alpha crystallin/Hsp20 domain|HSP20-like chaperone G3DSA:2.60.40.790|PF00011|SSF49764 BKD09_RS15955 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002068|IPR008978 Alpha crystallin/Hsp20 domain|HSP20-like chaperone G3DSA:2.60.40.790|PF00011|SSF49764 BKD09_RS15970 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005175 PPC domain G3DSA:3.30.1330.80|PF03479|SSF117856 BKD09_RS15980 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005025|IPR029039 Flavoprotein-like domain|NADPH-dependent FMN reductase-like GO:0016491 G3DSA:3.40.50.360|PF03358|SSF52218 BKD09_RS15985 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 BKD09_RS16020 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00196|SM00421|SSF46894 BKD09_RS16030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009078|IPR010287|IPR012347 Domain of unknown function DUF892|Ferritin-like superfamily|Ferritin-related G3DSA:1.20.1260.10|PF05974|SSF47240 BKD09_RS16035 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012337|IPR022898|IPR024567 Ribonuclease H-like domain|Ribonuclease HII|Ribonuclease HII/HIII domain GO:0003676|GO:0004523 G3DSA:3.30.420.10|MF_00052_B|PF01351|SSF53098 BKD09_RS16055 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007251 Low affinity iron permease, Fet4 GO:0055085 PF04120 BKD09_RS16060 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010406 Protein of unknown function DUF1003 PF06210 BKD09_RS16065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007341 Transglycosylase-associated protein GO:0016021 PF04226 BKD09_RS16075 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009937 Putative Actinobacterial Holin-X, holin superfamily III PF07332 BKD09_RS16095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR024064 FdhE-like G3DSA:3.90.1670.10 BKD09_RS16110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002068|IPR008978 Alpha crystallin/Hsp20 domain|HSP20-like chaperone G3DSA:2.60.40.790|PF00011|SSF49764 BKD09_RS16145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009642 Protein of unknown function DUF1236 PF06823 BKD09_RS16155 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS16160 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR001660|IPR011990|IPR013761|IPR027417|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|Nucleotide cyclase|P-loop containing nucleoside triphosphate hydrolase|Sterile alpha motif domain|Sterile alpha motif/pointed domain|Tetratricopeptide-like helical domain GO:0005515|GO:0009190|GO:0016849|GO:0035556 G3DSA:1.10.150.50|G3DSA:1.25.40.10|G3DSA:3.30.70.1230|G3DSA:3.40.50.300|PF00211|PF00536|PF13191|SM00044|SM00454|SSF47769|SSF48452|SSF52540|SSF55073 BKD09_RS16165 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 G3DSA:1.10.150.280|PF01548|PF02371 BKD09_RS16170 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|SSF46626 BKD09_RS16175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR011990|IPR027417|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|Nucleotide cyclase|P-loop containing nucleoside triphosphate hydrolase|Tetratricopeptide-like helical domain GO:0005515|GO:0009190|GO:0016849|GO:0035556 G3DSA:1.25.40.10|G3DSA:3.30.70.1230|G3DSA:3.40.50.300|PF00211|PF13191|SM00044|SSF52540|SSF55073 BKD09_RS16180 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PD043187|PF00665|SSF53098 BKD09_RS16185 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002611|IPR003593|IPR027417|IPR028350 AAA+ ATPase domain|DNA replication protein DnaC/insertion sequence putative ATP-binding protein|IstB-like ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF01695|PIRSF003073|SM00382|SSF52540 BKD09_RS16190 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SSF48452 BKD09_RS16205 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001867|IPR011990|IPR011991|IPR016032 OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Tetratricopeptide-like helical domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0005515|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.25.40.10|PF00486|PF14559|SM00862|SSF46894|SSF48452 BKD09_RS16215 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002549 Transmembrane protein TqsA-like PF01594 BKD09_RS16220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011852 TRAP transporter solute receptor, TAXI family G3DSA:3.40.190.10|PF16868|SSF53850|TIGR02122 BKD09_RS16245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002104|IPR011010|IPR013762|IPR023109|IPR025166 DNA breaking-rejoining enzyme, catalytic core|Domain of unknown function DUF4102|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PF13356|SSF56349 BKD09_RS16255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011991 Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF12728 BKD09_RS16265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011991|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|G3DSA:3.40.50.300|PF13412|PF13481|SSF46785|SSF52540 BKD09_RS16270 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015330 DNA primase/polymerase, bifunctional, N-terminal PF09250|SM00943|SSF56747 BKD09_RS16275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014 PAS domain G3DSA:3.30.450.20|G3DSA:3.40.50.2300|PF13426|SM00091|SSF55785|TIGR00229 BKD09_RS16280 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.40.50.2300|PF13433 BKD09_RS16295 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003018|IPR003594|IPR011495|IPR029016 GAF domain|GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain GO:0005515 G3DSA:3.30.450.40|G3DSA:3.30.565.10|PF01590|PF02518|PF07568|SM00065|SM00387|SSF55781|SSF55874 BKD09_RS16300 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009009|IPR012997 Rare lipoprotein A|RlpA-like protein, double-psi beta-barrel domain G3DSA:2.40.40.10|PF03330|SSF50685|TIGR00413 BKD09_RS16315 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009078|IPR010287|IPR012347 Domain of unknown function DUF892|Ferritin-like superfamily|Ferritin-related G3DSA:1.20.1260.10|PF05974|SSF47240 BKD09_RS16325 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|PF00857|SSF52499 BKD09_RS16330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005302|IPR011037|IPR015808 Molybdenum cofactor sulfurase, C-terminal|Molybdenum cofactor sulfurase, C-terminal-like|Pyruvate kinase-like, insert domain GO:0003824|GO:0030151|GO:0030170 G3DSA:2.40.33.20|PF03473|SSF50800 BKD09_RS16335 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR017039 Virulence factor BrkB PF03631|TIGR00765 BKD09_RS16340 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|SSF54593 BKD09_RS16350 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase G3DSA:1.20.144.10|PF01569|SSF48317 BKD09_RS16355 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021493 Protein of unknown function DUF3147 PF11345 BKD09_RS16380 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009078|IPR010287|IPR012347 Domain of unknown function DUF892|Ferritin-like superfamily|Ferritin-related G3DSA:1.20.1260.10|PF05974|SSF47240 BKD09_RS16420 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002068|IPR008978 Alpha crystallin/Hsp20 domain|HSP20-like chaperone G3DSA:2.60.40.790|PF00011|SSF49764 BKD09_RS16425 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012309|IPR012310|IPR012340|IPR014146 DNA ligase D, ligase domain|DNA ligase, ATP-dependent, C-terminal|DNA ligase, ATP-dependent, central|Nucleic acid-binding, OB-fold GO:0003910|GO:0005524|GO:0006281|GO:0006310 G3DSA:2.40.50.140|G3DSA:3.30.1490.70|G3DSA:3.30.470.30|PF01068|PF04679|SSF50249|SSF56091|TIGR02779 BKD09_RS16470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009959|IPR032710 NTF2-like domain|Polyketide cyclase SnoaL-like domain G3DSA:3.10.450.50|PF12680|SSF54427 BKD09_RS16485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018335|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Transcription regulator HTH, Crp-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0005622|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|PR00034|PS00042|SM00100|SM00419|SSF46785|SSF51206 BKD09_RS16505 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025668 Transposase DDE domain PF13751 BKD09_RS16510 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027843|IPR032710 Domain of unknown function DUF4440|NTF2-like domain G3DSA:3.10.450.50|PF14534|SSF54427 BKD09_RS16515 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011049 Serralysin-like metalloprotease, C-terminal G3DSA:2.150.10.10 BKD09_RS16520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021139|IPR029060 NYN domain, limkain-b1-type|PIN domain-like G3DSA:3.40.50.1010|PF01936 BKD09_RS16545 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008914 Phosphatidylethanolamine-binding protein G3DSA:3.90.280.10|PF01161|SSF49777 BKD09_RS16550 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021937 Protein of unknown function DUF3551 PF12071 BKD09_RS16570 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025375 Domain of unknown function DUF4365 PF14280 BKD09_RS16585 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 G3DSA:3.90.70.10|PF00112|SSF54001 BKD09_RS16590 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011991 Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10 BKD09_RS16595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS16600 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007400 PrpF protein G3DSA:3.10.310.10|PF04303|SSF54506 BKD09_RS16605 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001991|IPR018107 Sodium:dicarboxylate symporter|Sodium:dicarboxylate symporter, conserved site GO:0015293|GO:0016021 G3DSA:1.10.3860.10|PF00375|PR00173|PS00713|PS00714|SSF118215 BKD09_RS16610 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13673|SSF55729 BKD09_RS16615 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006140|IPR016040 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|NAD(P)-binding domain GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF02826|SSF51735 BKD09_RS16620 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008579|IPR011051|IPR014710 Domain of unknown function DUF861, cupin-3|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF05899|SSF51182 BKD09_RS16625 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010102|IPR015590|IPR016160|IPR016161|IPR016162|IPR016163|IPR029510 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase|Succinate semialdehyde dehydrogenase GO:0008152|GO:0009013|GO:0009450|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|PS00687|SSF53720|TIGR01780 BKD09_RS16630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006328|IPR006439|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain|Haloacid dehalogenase, type II GO:0008152|GO:0016787|GO:0019120 G3DSA:3.40.50.1000|PF13419|SSF56784|TIGR01428|TIGR01493|TIGR01549 BKD09_RS16635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005814|IPR015421|IPR015422|IPR015424 Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0008483|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00202|PIRSF000521|PS00600|SSF53383 BKD09_RS16640 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000485|IPR011008|IPR011991|IPR019885|IPR019887|IPR019888 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Transcription regulator HTH, AsnC-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13412|PR00033|PS00519|SM00344|SSF46785|SSF54909 BKD09_RS16645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006076|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01266|SSF51905 BKD09_RS16650 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540 BKD09_RS16655 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|PF00496|PIRSF002741|SSF53850 BKD09_RS16660 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS16665 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR025966 ABC transporter type 1, transmembrane domain MetI-like|Oligopeptide transport permease C-like, N-terminal domain GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PF12911|SSF161098 BKD09_RS16670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006076|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01266|SSF51905 BKD09_RS16675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001926|IPR004450|IPR029144 Threonine synthase, N-terminal|Threonine synthase-like|Tryptophan synthase beta subunit-like PLP-dependent enzyme G3DSA:3.40.50.1100|G3DSA:3.90.1380.10|PF00291|PF14821|SSF53686|TIGR00260 BKD09_RS16680 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002575|IPR005280|IPR011009 Aminoglycoside phosphotransferase|Homoserine kinase ThrB|Protein kinase-like domain GO:0004413|GO:0009088 G3DSA:3.30.200.20|G3DSA:3.90.1200.10|MF_00301|PF01636|SSF56112|TIGR00938 BKD09_RS16685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004839|IPR011282|IPR015421|IPR015422|IPR015424 2-amino-3-ketobutyrate coenzyme A ligase|Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0006567|GO:0008890|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00985|PF00155|SSF53383|TIGR01822 BKD09_RS16690 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002328|IPR011032|IPR013149|IPR013154|IPR016040 Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|Alcohol dehydrogenase, zinc-type, conserved site|GroES-like|NAD(P)-binding domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PS00059|SSF50129|SSF51735 BKD09_RS16695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13508|SSF55729 BKD09_RS16700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001608|IPR026956|IPR029066 Alanine racemase, N-terminal|D-serine dehydratase-like domain|PLP-binding barrel G3DSA:3.20.20.10|PF01168|PF14031|SM01119|SSF51419 BKD09_RS16705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015590|IPR016161|IPR016162|IPR016163 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|SSF53720 BKD09_RS16710 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006076|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01266|SSF51905 BKD09_RS16715 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007698|IPR007886|IPR008141|IPR008143|IPR016040|IPR023753 Alanine dehydrogenase|Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal|Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain|Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2|FAD/NAD(P)-binding domain|NAD(P)-binding domain GO:0000286|GO:0016491|GO:0042853|GO:0055114 G3DSA:3.40.50.1770|G3DSA:3.50.50.60|PF01262|PF05222|PIRSF000183|PS00837|SM01002|SM01003|SSF51735|SSF52283|TIGR00518 BKD09_RS16720 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004113|IPR006094|IPR016164|IPR016166|IPR016167|IPR016169|IPR016171 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|FAD-linked oxidase, C-terminal|FAD-linked oxidase-like, C-terminal|Vanillyl-alcohol oxidase, C-terminal subdomain 2 GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:1.10.45.10|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF01565|PF02913|SSF55103|SSF56176 BKD09_RS16725 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001991|IPR018107 Sodium:dicarboxylate symporter|Sodium:dicarboxylate symporter, conserved site GO:0015293|GO:0016021 G3DSA:1.10.3860.10|PF00375|PR00173|PS00713|SSF118215 BKD09_RS16730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003779|IPR029032 AhpD-like|Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 G3DSA:1.20.1290.10|PF02627|SSF69118 BKD09_RS16735 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00080|PR00081|SSF51735 BKD09_RS16740 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006680|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase GO:0016787 G3DSA:3.20.20.140|PF04909|SSF51556 BKD09_RS16745 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS16750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|SSF53474 BKD09_RS16755 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS16760 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|SM00346|SSF46785|SSF55781 BKD09_RS16765 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001753|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|SSF52096 BKD09_RS16770 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003781|IPR016040|IPR016102|IPR032875 CoA-binding|NAD(P)-binding domain|Succinyl-CoA synthetase-like|Succinyl-CoA synthetase-like, flavodoxin domain GO:0048037 G3DSA:3.40.50.261|G3DSA:3.40.50.720|PF13380|PF13549|PF13607|SM00881|SSF51735|SSF52210|SSF56059 BKD09_RS16775 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 PF00939|TIGR00785 BKD09_RS16780 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005829|IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain|Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PR01036|PS00216|SSF103473 BKD09_RS16785 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011051|IPR014710 RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|SSF51182 BKD09_RS16790 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 G3DSA:3.90.850.10|PF01557|SSF56529 BKD09_RS16795 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 BKD09_RS16800 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025997|IPR028082 Periplasmic binding protein|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13407|SSF53822 BKD09_RS16805 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS16810 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS16815 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS16820 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR022742|IPR029058 Alpha/Beta hydrolase fold|Serine aminopeptidase, S33 G3DSA:3.40.50.1820|PF12146|SSF53474 BKD09_RS16825 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SM00822|SSF51735 BKD09_RS16830 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000577|IPR005999|IPR018483|IPR018484|IPR018485 Carbohydrate kinase, FGGY|Carbohydrate kinase, FGGY, C-terminal|Carbohydrate kinase, FGGY, N-terminal|Carbohydrate kinase, FGGY, conserved site|Glycerol kinase GO:0004370|GO:0005975|GO:0006072|GO:0016773 G3DSA:3.30.420.40|MF_00186|PF00370|PF02782|PIRSF000538|PS00445|PS00933|SSF53067|TIGR01311 BKD09_RS16835 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011010|IPR013762|IPR023109|IPR025166 DNA breaking-rejoining enzyme, catalytic core|Domain of unknown function DUF4102|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF13356|SSF56349 BKD09_RS16840 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS16845 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 BKD09_RS16850 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004099|IPR016156|IPR023753 FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0016491|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF02852|PF07992|PIRSF000350|PR00368|PR00411|SSF51905|SSF55424 BKD09_RS16855 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005180 Domain of unknown function DUF302 G3DSA:3.30.310.70|PF03625|SSF103247 BKD09_RS16860 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000866|IPR012336 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF00578|SSF52833 BKD09_RS16865 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS16870 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR011294|IPR016040|IPR020904 3-hydroxybutyrate dehydrogenase|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0003858|GO:0016491|GO:0055114 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SSF51735|TIGR01963 BKD09_RS16875 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002641|IPR016035|IPR021095 Acyl transferase/acyl hydrolase/lysophospholipase|Patatin/Phospholipase A2-related|Protein of unknown function DUF3734 GO:0006629|GO:0008152 G3DSA:3.40.1090.10|PF01734|PF12536|SSF52151 BKD09_RS16880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021529 Protein of unknown function DUF2798 PF11391 BKD09_RS16885 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011991|IPR025714|IPR029063 Methyltransferase domain|S-adenosyl-L-methionine-dependent methyltransferase|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|G3DSA:3.40.50.150|PF13847|SSF46785|SSF53335 BKD09_RS16890 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032808 DoxX family PF07681 BKD09_RS16895 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018640 Putative DNA-binding domain, bacteria PF09836 BKD09_RS16900 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007801|IPR013022 Uncharacterised protein family UPF0276|Xylose isomerase-like, TIM barrel domain G3DSA:3.20.20.150|MF_00697|PF05114|SSF51658 BKD09_RS16905 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018740 Protein of unknown function DUF2282, integral membrane PF10048 BKD09_RS16910 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR029787|IPR033479 Adenylyl cyclase class-3/4/guanylyl cyclase|Double Cache domain 1|Nucleotide cyclase GO:0009190|GO:0016849|GO:0035556 G3DSA:3.30.450.20|G3DSA:3.30.70.1230|PF00211|PF02743|SM00044|SSF55073 BKD09_RS16915 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011010|IPR013762|IPR023109|IPR025166 DNA breaking-rejoining enzyme, catalytic core|Domain of unknown function DUF4102|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF13356|SSF56349 BKD09_RS16920 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR020846 Major facilitator superfamily domain G3DSA:1.20.1250.20|SSF103473 BKD09_RS16930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003594|IPR011712 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 G3DSA:3.30.565.10|PF02518|PF07730|SM00387|SSF55874 BKD09_RS16935 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|SM00421|SM00448|SSF46894|SSF52172 BKD09_RS16940 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001036|IPR004764|IPR027463 Acriflavin resistance protein|Hydrophobe/amphiphile efflux-1 HAE1|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3850.10|G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|SSF82693|SSF82714|SSF82866|TIGR00915 BKD09_RS16945 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|SSF111369|TIGR01730 BKD09_RS16950 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009333 Protein of unknown function DUF992 PF06186 BKD09_RS16960 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002549 Transmembrane protein TqsA-like PF01594 BKD09_RS16975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic PF01027 BKD09_RS16980 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009200 Protein of unknown function DUF1269, membrane associated PF06897 BKD09_RS16985 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit PF00361|PR01434 BKD09_RS16990 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 PF00420 BKD09_RS16995 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007182|IPR025383 Domain of unknown function DUF4040|Na+/H+ antiporter MnhB subunit-related protein PF04039|PF13244 BKD09_RS17000 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 PF03334 BKD09_RS17005 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 PF04066 BKD09_RS17010 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 PF01899 BKD09_RS17015 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|SSF111369|TIGR01730 BKD09_RS17020 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|SSF82693|SSF82714|SSF82866 BKD09_RS17025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004680|IPR006037|IPR031312 Citrate transporter-like domain|Regulator of K+ conductance, C-terminal|Sodium/sulphate symporter, conserved site GO:0006813|GO:0008324|GO:0016021|GO:0055085 G3DSA:3.30.70.1450|PF02080|PF03600|PS01271|SSF116726 BKD09_RS17030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001898|IPR004680|IPR006037 Citrate transporter-like domain|Regulator of K+ conductance, C-terminal|Sodium/sulphate symporter GO:0005215|GO:0006813|GO:0006814|GO:0008324|GO:0016020|GO:0016021|GO:0055085 G3DSA:3.30.70.1450|PF00939|PF03600|SSF116726 BKD09_RS17035 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002933|IPR011650 Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|SSF53187 BKD09_RS17040 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS17045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012338|IPR015868 Beta-lactamase/transpeptidase-like|Glutaminase GO:0004359|GO:0006541 G3DSA:3.40.710.10|MF_00313|PF04960|SSF56601|TIGR03814 BKD09_RS17050 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 PF03806 BKD09_RS17055 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic SSF56935 BKD09_RS17060 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR003594|IPR011712|IPR013656 Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold-4|Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF02518|PF07730|PF08448|SM00387|SSF55785|SSF55874 BKD09_RS17065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PS00622|SM00421|SM00448|SSF46894|SSF52172 BKD09_RS17075 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|SSF56349 BKD09_RS17080 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000683|IPR004104|IPR016040 NAD(P)-binding domain|Oxidoreductase, C-terminal|Oxidoreductase, N-terminal GO:0008152|GO:0016491|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01408|PF02894|SSF51735|SSF55347 BKD09_RS17085 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000683|IPR004104|IPR016040 NAD(P)-binding domain|Oxidoreductase, C-terminal|Oxidoreductase, N-terminal GO:0008152|GO:0016491|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01408|PF02894|SSF51735|SSF55347 BKD09_RS17090 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003764|IPR006680|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448|GO:0016787 G3DSA:3.20.20.140|PF01979|PIRSF038994|SSF51556 BKD09_RS17095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 G3DSA:3.40.50.1360|PF01182|SSF100950 BKD09_RS17100 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000843|IPR010982|IPR028082 LacI-type HTH domain|Lambda repressor-like, DNA-binding domain|Periplasmic binding protein-like I GO:0003677|GO:0006355 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|SM00354|SSF47413|SSF53822 BKD09_RS17105 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.40.190.10|PF13416|SSF53850 BKD09_RS17110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS17115 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS17120 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004305|IPR016084|IPR027574 Haem oxygenase-like, multi-helical|Thiaminase II|Thiaminase-2/PQQC GO:0006772|GO:0050334 G3DSA:1.20.910.10|PF03070|SSF48613|TIGR04306 BKD09_RS17135 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013830 SGNH hydrolase-type esterase domain G3DSA:3.40.50.1110|PF13472|SSF52266 BKD09_RS17140 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029058 Alpha/Beta hydrolase fold G3DSA:3.40.50.1820|SSF53474 BKD09_RS17145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007269 Isoprenylcysteine carboxyl methyltransferase GO:0004671|GO:0006481|GO:0016021 PF04140 BKD09_RS17165 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006158|IPR006638|IPR007197|IPR023404|IPR025274 Cobalamin (vitamin B12)-binding domain|Domain of unknown function DUF4070|Elongator protein 3/MiaB/NifB|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0031419|GO:0046872|GO:0051536 G3DSA:3.80.30.20|PF02310|PF04055|PF13282|SM00729|SSF102114 BKD09_RS17170 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 PF03279 BKD09_RS17180 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006665 OmpA-like domain G3DSA:3.30.1330.60|SSF103088 BKD09_RS17205 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018773|IPR025714|IPR029063 Methyltransferase domain|Methyltransferase regulatory domain, predicted|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF10119|PF13847|SSF53335 BKD09_RS17210 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001270|IPR003593|IPR003959|IPR004176|IPR017729|IPR018368|IPR019489|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|Clp ATPase, C-terminal|Clp, N-terminal|ClpA/B family|ClpA/B, conserved site 1|P-loop containing nucleoside triphosphate hydrolase|Type VI secretion system, ATPase ClpV1 GO:0005524|GO:0019538 G3DSA:1.10.1780.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00004|PF07724|PF10431|PR00300|PS00870|SM00382|SM01086|SSF52540|SSF81923|TIGR03345 BKD09_RS17215 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010732 Type VI secretion, TssG-like PF06996|TIGR03347 BKD09_RS17220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010272 Type VI secretion system, TssF-like PF05947|PIRSF028304|TIGR03359 BKD09_RS17225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007048|IPR017737 GpW/Gp25/anti-adapter protein IraD|Type VI secretion system, lysozyme-related protein G3DSA:3.10.450.40|PF04965|SSF160719|TIGR03357 BKD09_RS17235 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008514 Type VI secretion system effector, Hcp G3DSA:2.30.110.20|PF05638|SSF141452 BKD09_RS17240 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath PF05943|TIGR03355 BKD09_RS17245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 PF05591|PIRSF028301|TIGR03358 BKD09_RS17250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010657 ImpA, N-terminal PF06812 BKD09_RS17255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006531|IPR006533|IPR017847 Gp5 N-terminal|Type VI secretion system, RhsGE-associated Vgr family subset|Type VI secretion system, RhsGE-associated Vgr protein G3DSA:2.40.50.230|G3DSA:3.55.50.10|PF05954|SSF69255|SSF69279|SSF69349|TIGR01646|TIGR03361 BKD09_RS17265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000253|IPR008984|IPR017735 Forkhead-associated (FHA) domain|SMAD/FHA domain|Type VI secretion system, FHA domain-containing protein GO:0005515 G3DSA:2.60.200.20|PF00498|SM00240|SSF49879|TIGR03354 BKD09_RS17270 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010263 Type VI secretion protein, VC_A0114 PF05936|TIGR03353 BKD09_RS17275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006665|IPR017732|IPR017733 OmpA-like domain|Type IV / VI secretion system, DotU|Type VI secretion system peptidoglycan-associated domain G3DSA:3.30.1330.60|PF00691|PF09850|SSF103088|TIGR03349|TIGR03350 BKD09_RS17280 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009612|IPR010623|IPR017731|IPR025743|IPR027417 ImcF-related|ImcF-related, N-terminal domain|P-loop containing nucleoside triphosphate hydrolase|Type VI secretion system IcmF, C-terminal|Type VI secretion system, IcmF G3DSA:3.40.50.300|PF06744|PF06761|PF14331|SSF52540|TIGR03348 BKD09_RS17285 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR017748 Type VI secretion system-associated, BMAA0400 G3DSA:3.40.1730.10|PF09867|PIRSF029287|TIGR03373 BKD09_RS17290 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001932 PPM-type phosphatase domain GO:0003824 G3DSA:3.60.40.10|PF13672|SM00331|SM00332|SSF81606 BKD09_RS17295 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000719|IPR008266|IPR011009|IPR017441 Protein kinase domain|Protein kinase, ATP binding site|Protein kinase-like domain|Tyrosine-protein kinase, active site GO:0004672|GO:0005524|GO:0006468 G3DSA:1.10.510.10|G3DSA:3.30.200.20|PF00069|PS00107|PS00109|SSF56112 BKD09_RS17300 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025538 Domain of unknown function DUF4424 PF14415 BKD09_RS17310 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000064|IPR011042 Endopeptidase, NLPC/P60 domain|Six-bladed beta-propeller, TolB-like G3DSA:2.120.10.30|G3DSA:3.90.1720.10|SSF101898 BKD09_RS17315 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018247|IPR029030 Caspase-like domain|EF-Hand 1, calcium-binding site G3DSA:3.40.50.1460|PF00656|PS00018|SSF52129 BKD09_RS17320 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025493 Domain of unknown function DUF4384 PF14326 BKD09_RS17325 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029058 Alpha/Beta hydrolase fold G3DSA:3.40.50.1820|SSF53474 BKD09_RS17330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029030 Caspase-like domain G3DSA:3.40.50.1460|PF00656|SSF52129 BKD09_RS17335 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007318 Phospholipid methyltransferase PF04191 BKD09_RS17340 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029030 Caspase-like domain G3DSA:3.40.50.1460|PF00656|SSF52129 BKD09_RS17355 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00196|PR00038|PS00622|SM00421|SSF46894 BKD09_RS17360 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003997|IPR010129 RTX secretion protein D, Gram-negative bacteria|Type I secretion membrane fusion protein, HlyD family GO:0009306|GO:0015031|GO:0016020|GO:0016021 G3DSA:2.40.50.100|PF13437|PR01490|SSF111369|TIGR01843 BKD09_RS17365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR011527|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|SM00382|SSF52540|SSF90123 BKD09_RS17385 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001227|IPR014043|IPR016035|IPR020801 Acyl transferase|Acyl transferase domain|Acyl transferase/acyl hydrolase/lysophospholipase|Polyketide synthase, acyl transferase domain GO:0008152|GO:0016740 G3DSA:3.30.70.250|G3DSA:3.40.366.10|PF00698|SM00827|SSF52151 BKD09_RS17390 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002736|IPR017555 Triphosphoribosyl-dephospho-CoA protein|Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MF_01883|PF01874|TIGR03132 BKD09_RS17395 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 PF10620|TIGR03135 BKD09_RS17400 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009648|IPR011763|IPR029045 Acetyl-coenzyme A carboxyltransferase, C-terminal|Biotin-dependent malonate decarboxylase, gamma subunit|ClpP/crotonase-like domain GO:0016874|GO:0044262 G3DSA:3.90.226.10|PF06833|SSF52096|TIGR03134 BKD09_RS17405 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000022|IPR017556|IPR029045 Biotin-independent malonate decarboxylase, beta subunit|Carboxyl transferase|ClpP/crotonase-like domain GO:0016831|GO:0044262 G3DSA:3.90.226.10|PF01039|SSF52096|TIGR03133 BKD09_RS17410 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009662|IPR023439 Malonate decarboxylase delta subunit|Malonate decarboxylase/citrate lyase acyl carrier protein MF_00710|PD015450|PF06857|TIGR03130 BKD09_RS17415 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005777 Acetyl-S-ACP:malonate ACP transferase G3DSA:3.40.1080.10|PF16957|SSF100950|TIGR01110 BKD09_RS17420 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004690 Malonate transporter MadL subunit GO:0016020 PF03817|TIGR00807 BKD09_RS17425 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004691|IPR018402 Malonate/sodium symporter MadM subunit|Malonate/sodium symporter MadM subunit, N-terminal GO:0044668 PF03818|TIGR00808 BKD09_RS17430 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|SM00345|SM00895|SSF46785|SSF48008 BKD09_RS17435 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS17440 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000683|IPR016040 NAD(P)-binding domain|Oxidoreductase, N-terminal GO:0016491 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01408|SSF51735|SSF55347 BKD09_RS17445 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540 BKD09_RS17450 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000101|IPR029055 Gamma-glutamyltranspeptidase|Nucleophile aminohydrolases, N-terminal GO:0003840|GO:0006749 PF01019|PR01210|SSF56235|TIGR00066 BKD09_RS17455 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004547|IPR006148|IPR018321 Glucosamine-6-phosphate isomerase|Glucosamine-6-phosphate isomerase, conserved site|Glucosamine/galactosamine-6-phosphate isomerase GO:0004342|GO:0005975|GO:0006044 G3DSA:3.40.50.1360|PF01182|PS01161|SSF100950|TIGR00502 BKD09_RS17460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000600|IPR011991 ROK family|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|G3DSA:3.30.420.40|PF00480|PF13412|SSF46785|SSF53067 BKD09_RS17465 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|SSF53850 BKD09_RS17470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS17475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR025966 ABC transporter type 1, transmembrane domain MetI-like|Oligopeptide transport permease C-like, N-terminal domain GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PF12911|SSF161098 BKD09_RS17480 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002549 Transmembrane protein TqsA-like PF01594 BKD09_RS17485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 G3DSA:3.30.420.40|PF00871|PR00471|SSF53067 BKD09_RS17490 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013099 Potassium channel domain G3DSA:1.10.287.70|PF07885|SSF81324 BKD09_RS17495 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018335|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Transcription regulator HTH, Crp-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0005622|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|PR00034|PS00042|SM00100|SM00419|SSF46785|SSF51206 BKD09_RS17500 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|SM00421|SM00448|SSF46894|SSF52172 BKD09_RS17505 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 BKD09_RS17510 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010642 Invasion protein B PF06776 BKD09_RS17515 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002925|IPR029058 Alpha/Beta hydrolase fold|Dienelactone hydrolase GO:0016787 G3DSA:3.40.50.1820|PF01738|SSF53474 BKD09_RS17520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006037|IPR006512 Regulator of K+ conductance, C-terminal|YidE/YbjL duplication GO:0006813|GO:0008324 PF06826|SSF116726 BKD09_RS17525 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010699 Protein of unknown function DUF1275 PF06912 BKD09_RS17530 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002645|IPR011547 SLC26A/SulP transporter domain|STAS domain GO:0008272|GO:0015116|GO:0016021 G3DSA:3.30.750.24|PF00916|PF01740|SSF52091 BKD09_RS17535 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000310|IPR008286|IPR015421|IPR015422|IPR015424 Orn/Lys/Arg decarboxylase, C-terminal|Orn/Lys/Arg decarboxylase, major domain|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.100.10|G3DSA:3.90.1150.10|PF01276|SSF53383|SSF55904 BKD09_RS17540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006037|IPR006512|IPR022457 Aspartate-alanine antiporter|Regulator of K+ conductance, C-terminal|YidE/YbjL duplication GO:0005215|GO:0006813|GO:0008324|GO:0016020 G3DSA:3.30.70.1450|PF06826|SSF116726|TIGR01625|TIGR03802 BKD09_RS17545 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006037|IPR006512|IPR022457 Aspartate-alanine antiporter|Regulator of K+ conductance, C-terminal|YidE/YbjL duplication GO:0005215|GO:0006813|GO:0008324|GO:0016020 G3DSA:3.30.70.1450|PF02080|PF06826|SSF116726|TIGR01625|TIGR03802 BKD09_RS17550 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004839|IPR015421|IPR015422|IPR015424|IPR022518 Aminotransferase, class I/classII|Aspartate 4-decarboxylase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|SSF53383|TIGR03801 BKD09_RS17560 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016898|IPR022486|IPR022488|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Polyphosphate kinase 2|Polyphosphate kinase 2, PA0141|Polyphosphate kinase-2-related GO:0006793|GO:0008976 G3DSA:3.40.50.300|PF03976|PIRSF028756|SSF52540|TIGR03707 BKD09_RS17575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:2.40.50.100|PF13533|SSF111369 BKD09_RS17580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF02518|PR00344|SM00387|SM00388|SSF47384|SSF55874 BKD09_RS17585 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021728 Protein of unknown function DUF3300 PF11737 BKD09_RS17590 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021556 Protein of unknown function DUF2950 PF11453 BKD09_RS17600 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006175|IPR013813|IPR019897 Endoribonuclease L-PSP/chorismate mutase-like|RidA, conserved site|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|PS01094|SSF55298 BKD09_RS17605 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006655|IPR006656|IPR006657|IPR009010 Aspartate decarboxylase-like domain|Molybdopterin dinucleotide-binding domain|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0030151|GO:0055114 G3DSA:2.40.40.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|G3DSA:3.90.55.10|PF00384|PF01568|PS00932|SSF50692|SSF53706 BKD09_RS17610 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR018060|IPR018062|IPR020449 DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PR00032|PS00041|SM00342|SSF46689 BKD09_RS17615 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001867|IPR002182|IPR011990|IPR011991|IPR016032|IPR027417 NB-ARC|OmpR/PhoB-type DNA-binding domain|P-loop containing nucleoside triphosphate hydrolase|Signal transduction response regulator, C-terminal effector|Tetratricopeptide-like helical domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0005515|GO:0006355|GO:0043531 G3DSA:1.10.10.10|G3DSA:1.25.40.10|G3DSA:3.40.50.300|PF00486|PF00931|SM00862|SSF46894|SSF48452|SSF52540 BKD09_RS17625 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR000639|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Epoxide hydrolase-like GO:0003824 G3DSA:3.40.50.1820|PF00561|PR00412|SSF53474 BKD09_RS17630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR000639|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Epoxide hydrolase-like GO:0003824 G3DSA:3.40.50.1820|PF00561|PR00111|PR00412|SSF53474 BKD09_RS17635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002818|IPR029062 Class I glutamine amidotransferase-like|DJ-1/PfpI G3DSA:3.40.50.880|PF01965|SSF52317 BKD09_RS17645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001867|IPR011717|IPR011990|IPR011991|IPR016032|IPR019734|IPR027417 OmpR/PhoB-type DNA-binding domain|P-loop containing nucleoside triphosphate hydrolase|Signal transduction response regulator, C-terminal effector|Tetratricopeptide TPR-4|Tetratricopeptide repeat|Tetratricopeptide-like helical domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0005515|GO:0006355|GO:0042802 G3DSA:1.10.10.10|G3DSA:1.25.40.10|G3DSA:3.40.50.300|PF00486|PF07721|SM00028|SM00862|SSF46894|SSF48452|SSF52540 BKD09_RS17650 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003594|IPR011495 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain G3DSA:3.30.565.10|PF07568|PF13581|SSF55874 BKD09_RS17655 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|SSF54593 BKD09_RS17660 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000639|IPR010497|IPR016292|IPR029058 Alpha/Beta hydrolase fold|Epoxide hydrolase|Epoxide hydrolase, N-terminal|Epoxide hydrolase-like GO:0003824|GO:0033961 G3DSA:3.40.50.1820|PF06441|PIRSF001112|PR00412|SSF53474 BKD09_RS17665 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001753|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|SSF52096 BKD09_RS17670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003718|IPR015946|IPR019904 K homology domain-like, alpha/beta|OsmC/Ohr family|Peroxiredoxin OsmC GO:0004601|GO:0006979 G3DSA:3.30.300.20|PF02566|SSF82784|TIGR03562 BKD09_RS17675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011051|IPR014710 RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|SSF51182 BKD09_RS17680 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 G3DSA:3.30.1060.10|MF_01401|PF01625|SSF55068|TIGR00401 BKD09_RS17685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|SSF46689|SSF48498 BKD09_RS17690 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain G3DSA:2.40.50.100|PF13533|PF16576|SSF111369 BKD09_RS17695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS17700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018170|IPR020471|IPR023210 Aldo/keto reductase|Aldo/keto reductase, conserved site|NADP-dependent oxidoreductase domain GO:0016491|GO:0055114 G3DSA:3.20.20.100|PF00248|PIRSF000097|PR00069|PS00798|SSF51430 BKD09_RS17705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001867|IPR011990|IPR011991|IPR016032|IPR027417 OmpR/PhoB-type DNA-binding domain|P-loop containing nucleoside triphosphate hydrolase|Signal transduction response regulator, C-terminal effector|Tetratricopeptide-like helical domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0005515|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.25.40.10|G3DSA:3.40.50.300|PF00486|SM00862|SSF46894|SSF52540 BKD09_RS17710 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 BKD09_RS17715 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS17720 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005546|IPR011050|IPR012332|IPR013425 Autotransporter beta-domain|Autotransporter-associated beta strand repeat|P22 tailspike C-terminal domain-like|Pectin lyase fold/virulence factor G3DSA:2.160.20.20|G3DSA:2.40.128.130|PF03797|PF12951|SM00869|SSF103515|SSF51126|TIGR02601 BKD09_RS17740 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002104|IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|SSF56349 BKD09_RS17750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010985|IPR013321 Arc-type ribbon-helix-helix|Ribbon-helix-helix GO:0006355 G3DSA:1.10.1220.10|SSF47598 BKD09_RS17765 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003115 ParB/Sulfiredoxin G3DSA:3.90.1530.10|SSF110849 BKD09_RS17770 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002711|IPR003615 HNH endonuclease|HNH nuclease GO:0003676|GO:0004519 PF01844|SM00507 BKD09_RS17785 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011990|IPR013105|IPR019734 Tetratricopeptide repeat|Tetratricopeptide repeat 2|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF07719|SM00028|SSF48452 BKD09_RS17800 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007407|IPR013830 Protein of unknown function DUF459|SGNH hydrolase-type esterase domain G3DSA:3.40.50.1110|PF04311|SSF52266 BKD09_RS17805 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007487 ABC transporter, substrate-binding protein PF04392 BKD09_RS17810 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021937 Protein of unknown function DUF3551 PF12071 BKD09_RS17820 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029058 Alpha/Beta hydrolase fold G3DSA:3.40.50.1820|SSF53474 BKD09_RS17840 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002549 Transmembrane protein TqsA-like PF01594 BKD09_RS17845 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006037|IPR006512 Regulator of K+ conductance, C-terminal|YidE/YbjL duplication GO:0006813|GO:0008324 G3DSA:3.30.70.1450|PF06826|SSF116726|TIGR01625 BKD09_RS17855 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 BKD09_RS17865 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025737 MetA-pathway of phenol degradation, putative PF13557 BKD09_RS17880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025737 MetA-pathway of phenol degradation, putative PF13557 BKD09_RS17885 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010486 HNS-dependent expression A/B G3DSA:1.10.890.10|PF06411 BKD09_RS17900 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|SM00100|SSF46785|SSF51206 BKD09_RS17905 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 BKD09_RS17910 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004670|IPR023171 Na+/H+ antiporter NhaA|Na/H antiporter domain GO:0006814|GO:0006885|GO:0016021 G3DSA:1.20.1530.10|MF_01844|PF06965|TIGR00773 BKD09_RS17930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002933|IPR010158|IPR011650 Amidase, carbamoylase-type|Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787|GO:0016813 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PIRSF001235|SSF53187|SSF55031|TIGR01879 BKD09_RS17935 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|SM00382|SSF52540 BKD09_RS17940 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS17945 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001638|IPR015168 Solute-binding protein family 3/N-terminal domain of MltF|SsuA/THI5-like G3DSA:3.40.190.10|PF09084|SM00062|SSF53850 BKD09_RS17950 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR010248|IPR011663|IPR011991|IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain|Histidine utilization repressor|Transcription regulator HTH, GntR|UbiC transcription regulator-associated|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006355|GO:0006547|GO:0045892 G3DSA:1.10.10.10|G3DSA:3.40.1410.10|PF00392|PF07702|PR00035|SM00345|SM00866|SSF46785|SSF64288|TIGR02018 BKD09_RS17955 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006680|IPR010252|IPR011059|IPR032466 Amidohydrolase-related|Formiminoglutamate deiminase|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016787|GO:0016810 G3DSA:3.20.20.140|PF01979|SSF51338|SSF51556|TIGR02022 BKD09_RS17960 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005920|IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Imidazolonepropionase|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0005737|GO:0016787|GO:0016810|GO:0016812|GO:0019556 G3DSA:2.30.40.10|G3DSA:3.20.20.140|MF_00372|PF01979|SSF51338|SSF51556|TIGR01224 BKD09_RS17965 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001106|IPR005921|IPR008948|IPR022313|IPR024083 Aromatic amino acid lyase|Fumarase/histidase, N-terminal|Histidine ammonia-lyase|L-Aspartase-like|Phenylalanine/histidine ammonia-lyases, active site GO:0003824|GO:0004397|GO:0005737|GO:0006548|GO:0016841 G3DSA:1.10.275.10|G3DSA:1.20.200.10|MF_00229|PF00221|PS00488|SSF48557|TIGR01225 BKD09_RS17970 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023636|IPR023637 Urocanase|Urocanase conserved site GO:0016153 G3DSA:3.40.1770.10|G3DSA:3.40.50.10730|MF_00577|PF01175|PIRSF001423|PS01233|SSF111326|TIGR01228 BKD09_RS17975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|SSF46689 BKD09_RS17980 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002346|IPR005107|IPR016166|IPR016167|IPR016169 CO dehydrogenase flavoprotein, C-terminal|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|Molybdopterin dehydrogenase, FAD-binding GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.30.390.50|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF00941|PF03450|SM01092|SSF55447|SSF56176 BKD09_RS17985 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001041|IPR002888|IPR006058|IPR012675 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|[2Fe-2S]-binding GO:0009055|GO:0016491|GO:0046872|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.150.120|G3DSA:3.10.20.30|PF00111|PF01799|PS00197|SSF47741|SSF54292 BKD09_RS17990 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000674|IPR008274 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF01315|PF02738|SM01008|SSF54665|SSF56003 BKD09_RS17995 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS18000 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS18005 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS18010 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|PS00211|SM00382|SSF52540 BKD09_RS18015 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS18025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011050|IPR012334 Pectin lyase fold|Pectin lyase fold/virulence factor G3DSA:2.160.20.10|PF13229|SSF51126 BKD09_RS18035 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006949|IPR011749 Baseplate protein J-like|Conserved hypothetical protein CHP02243 PF04865|TIGR02243 BKD09_RS18040 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006949|IPR011749 Baseplate protein J-like|Conserved hypothetical protein CHP02243 PF04865|TIGR02243 BKD09_RS18045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007048 GpW/Gp25/anti-adapter protein IraD G3DSA:3.10.450.40|PF04965|SSF160719 BKD09_RS18055 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006531 Gp5 N-terminal G3DSA:2.40.50.230|SSF69255 BKD09_RS18060 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic SSF69279 BKD09_RS18080 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025295 Domain of unknown function DUF4157 PF13699 BKD09_RS18090 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003593|IPR003959|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF00004|SM00382|SSF52540 BKD09_RS18095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025351 Protein of unknown function DUF4255 PF14065 BKD09_RS18110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010667|IPR011747 Bacteriophage T4, Gp19, tail tube|Conserved hypothetical protein CHP02241 GO:0005198 PF06841|TIGR02241 BKD09_RS18115 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007067 Tail sheath protein PF04984 BKD09_RS18125 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PS00622|SM00421|SSF46894|SSF52172 BKD09_RS18130 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000160|IPR001633|IPR029787 EAL domain|GGDEF domain|Nucleotide cyclase G3DSA:3.20.20.450|G3DSA:3.30.70.270|PF00563|PF00990|SM00052|SM00267|SSF141868|SSF55073|TIGR00254 BKD09_RS18135 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|SM00849|SSF56281 BKD09_RS18140 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000801|IPR029058 Alpha/Beta hydrolase fold|Putative esterase G3DSA:3.40.50.1820|PF00756|SSF53474 BKD09_RS18145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|SSF56935 BKD09_RS18160 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR024370 PBP domain G3DSA:3.40.190.10|PF12849|SSF53850 BKD09_RS18165 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS18170 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006659|IPR006660|IPR012336 Arsenate reductase|Arsenate reductase-like|Thioredoxin-like fold GO:0008794|GO:0055114 G3DSA:3.40.30.10|PF03960|SSF52833|TIGR00014 BKD09_RS18175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005673|IPR024370 ABC transporter, phosphate-binding protein PstS|PBP domain GO:0035435|GO:0042301|GO:0043190 G3DSA:3.40.190.10|PF12849|PIRSF002756|SSF53850|TIGR00975 BKD09_RS18180 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006108|IPR006176|IPR008927|IPR013328|IPR016040|IPR022694 3-hydroxyacyl-CoA dehydrogenase|3-hydroxyacyl-CoA dehydrogenase, C-terminal|3-hydroxyacyl-CoA dehydrogenase, NAD binding|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0003857|GO:0006631|GO:0016491|GO:0055114|GO:0070403 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF00725|PF02737|PIRSF000105|SSF48179|SSF51735 BKD09_RS18185 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001486|IPR009050|IPR012292 Globin-like|Globin/Protoglobin|Truncated hemoglobin GO:0019825|GO:0020037 G3DSA:1.10.490.10|PF01152|SSF46458 BKD09_RS18190 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005805|IPR017941 Rieske [2Fe-2S] iron-sulphur domain|Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0016491|GO:0051537|GO:0055114 G3DSA:2.102.10.10|PF00355|PR00162|SSF50022 BKD09_RS18195 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002372|IPR011047|IPR017512|IPR018391|IPR027295 PQQ-dependent dehydrogenase, methanol/ethanol family|Pyrrolo-quinoline quinone beta-propeller repeat|Pyrrolo-quinoline quinone repeat|Quinoprotein alcohol dehydrogenase-like domain|Quinoprotein alcohol dehydrogenase-like superfamily GO:0005509|GO:0016020|GO:0016614|GO:0055114 G3DSA:2.140.10.10|PF13360|SM00564|SSF50998|TIGR03075 BKD09_RS18205 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000674|IPR008274|IPR012368 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding|Oxidoreductase molybdopterin-binding subunit, IorB-related GO:0016491|GO:0055114 G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF01315|PF02738|PIRSF036389|SM01008|SSF56003 BKD09_RS18210 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001041|IPR002888|IPR006058|IPR012675 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|[2Fe-2S]-binding GO:0009055|GO:0016491|GO:0046872|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.150.120|G3DSA:3.10.20.30|PF00111|PF01799|PS00197|SSF47741|SSF54292 BKD09_RS18215 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006913|IPR011057|IPR014185 Glutathione-dependent formaldehyde-activating enzyme|Glutathione-dependent formaldehyde-activating enzyme/centromere protein V|Mss4-like GO:0008152|GO:0008270|GO:0016846|GO:0046294|GO:0051907 G3DSA:3.90.1590.10|MF_00723|PF04828|PIRSF033318|SSF51316|TIGR02820 BKD09_RS18220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002328|IPR011032|IPR013149|IPR013154|IPR014183|IPR016040 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|Alcohol dehydrogenase, zinc-type, conserved site|GroES-like|NAD(P)-binding domain GO:0006069|GO:0008270|GO:0016491|GO:0051903|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PS00059|SSF50129|SSF51735|TIGR02818 BKD09_RS18225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009056|IPR022411 C-type cytochrome, methanol metabolism-related|Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|SSF46626|TIGR03874 BKD09_RS18230 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001479|IPR002372|IPR011047|IPR017512|IPR018391|IPR027295 PQQ-dependent dehydrogenase, methanol/ethanol family|Pyrrolo-quinoline quinone beta-propeller repeat|Pyrrolo-quinoline quinone repeat|Quinoprotein alcohol dehydrogenase-like domain|Quinoprotein alcohol dehydrogenase-like superfamily|Quinoprotein dehydrogenase, conserved site GO:0005509|GO:0016020|GO:0016614|GO:0030288|GO:0055114 G3DSA:2.140.10.10|PF01011|PF13360|PS00364|SM00564|SSF50998|TIGR03075 BKD09_RS18235 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003313|IPR009057|IPR018060|IPR020449 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|Homeodomain-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:2.60.120.280|PF12833|PF14525|PR00032|SM00342|SSF46689|SSF51215 BKD09_RS18245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005064 Bordetella uptake gene GO:0030288 G3DSA:3.40.190.10|PF03401|PIRSF017082|SSF53850 BKD09_RS18250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic PF13515 BKD09_RS18255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001638 Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF00497|SM00062|SSF53850 BKD09_RS18260 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|SSF46626 BKD09_RS18265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002372|IPR011047|IPR017512|IPR018391|IPR027295 PQQ-dependent dehydrogenase, methanol/ethanol family|Pyrrolo-quinoline quinone beta-propeller repeat|Pyrrolo-quinoline quinone repeat|Quinoprotein alcohol dehydrogenase-like domain|Quinoprotein alcohol dehydrogenase-like superfamily GO:0005509|GO:0016020|GO:0016614|GO:0055114 G3DSA:2.140.10.10|PF13360|SM00564|SSF50998|TIGR03075 BKD09_RS18270 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002048|IPR011992|IPR018247 EF-Hand 1, calcium-binding site|EF-hand domain|EF-hand domain pair GO:0005509 G3DSA:1.10.238.10|PF13202|PS00018|SSF47473 BKD09_RS18275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 MF_00656|PF08042|TIGR02107 BKD09_RS18295 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001646 Pentapeptide repeat PF00805|SSF141571 BKD09_RS18300 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|SM00382|SSF52540 BKD09_RS18305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS18310 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015168 SsuA/THI5-like G3DSA:3.40.190.10|PF09084|SSF53850 BKD09_RS18320 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002559|IPR008490 Transposase InsH, N-terminal|Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PF01609|PF05598 BKD09_RS18325 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013783|IPR014756|IPR014880|IPR030831|IPR032711 Ig-like SoxY domain|Immunoglobulin E-set|Immunoglobulin-like fold|Quinoprotein dehydrogenase-associated SoxYZ-like carrier|Sulphur oxidation protein SoxZ G3DSA:2.60.40.10|PF08770|PF13501|SSF81296|TIGR04557 BKD09_RS18330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279|IPR030829 Metallo-beta-lactamase|Quinoprotein relay system zinc metallohydrolase 2 G3DSA:3.60.15.10|PF00753|SM00849|SSF56281|TIGR04559 BKD09_RS18335 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001638|IPR022448 Quinoprotein dehydrogenase-associated|Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF00497|SM00062|SSF53850|TIGR03871 BKD09_RS18340 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001763|IPR022376 PQQ-dependent catabolism-associated CXXCW motif|Rhodanese-like domain G3DSA:3.40.250.10|SSF52821|TIGR03865 BKD09_RS18345 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021647 Copper binding periplasmic protein CusF PF11604 BKD09_RS18355 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000412|IPR013525|IPR022403 ABC-2 transporter|ABC-2 type transporter|Alcohol ABC transporter, permease protein GO:0006810|GO:0016020 PF01061|PIRSF006648|PR00164|TIGR03861 BKD09_RS18360 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR022467|IPR027417 AAA+ ATPase domain|ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540|TIGR03864 BKD09_RS18365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011045|IPR011964|IPR015943|IPR022456 Nitrous oxide reductase, N-terminal|PQQ-dependent catabolism-associated beta-propeller protein|WD40/YVTN repeat-like-containing domain|YVTN beta-propeller repeat GO:0005515 G3DSA:2.130.10.10|SSF50974|TIGR02276|TIGR03866 BKD09_RS18370 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR022478|IPR028081|IPR028082 ABC transporter, substrate-binding protein, PQQ-dependent alcohol dehydrogenase system|Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822|TIGR03863 BKD09_RS18375 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007195|IPR021698 Protein of unknown function DUF2380|TolB, N-terminal GO:0015031|GO:0042597 G3DSA:3.40.50.10070|PF11684|SSF52964 BKD09_RS18380 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000801|IPR014186|IPR029058 Alpha/Beta hydrolase fold|Putative esterase|S-formylglutathione hydrolase GO:0018738|GO:0046294 G3DSA:3.40.50.1820|PF00756|SSF53474|TIGR02821 BKD09_RS18385 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|SM00421|SM00448|SSF46894|SSF52172 BKD09_RS18390 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003594|IPR003660|IPR011712|IPR032244 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|LapD/MoxY, periplasmic domain|Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0004871|GO:0007165|GO:0016021|GO:0046983 G3DSA:3.30.565.10|PF00672|PF02518|PF07730|PF16448|SM00304|SM00387|SSF55874 BKD09_RS18395 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000531|IPR010917|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, conserved site|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PS01156|SSF56935 BKD09_RS18400 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027843|IPR032710 Domain of unknown function DUF4440|NTF2-like domain G3DSA:3.10.450.50|PF14534|SSF54427 BKD09_RS18405 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 BKD09_RS18410 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007837|IPR027369 DNA damage-inducible protein DinB|DinB/YfiT-like putative metal-dependent hydrolase G3DSA:1.20.120.450|PF05163|SSF109854 BKD09_RS18420 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032417 T3SS negative regulator GrlR PF16518 BKD09_RS18430 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001360|IPR013781|IPR017736|IPR017853|IPR033132 Glycoside hydrolase family 1|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 1, beta-glucosidase|Glycosyl hydrolases family 1, N-terminal conserved site GO:0004553|GO:0005975|GO:0008422|GO:0030245 G3DSA:3.20.20.80|PF00232|PR00131|PS00653|SSF51445|TIGR03356 BKD09_RS18435 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002155|IPR016039|IPR020610|IPR020613|IPR020616|IPR020617 Thiolase|Thiolase, C-terminal|Thiolase, N-terminal|Thiolase, active site|Thiolase, conserved site|Thiolase-like GO:0003824|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00108|PF02803|PIRSF000429|PS00099|PS00737|SSF53901|TIGR01930 BKD09_RS18440 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000119|IPR010992 Histone-like DNA-binding protein|Integration host factor (IHF)-like DNA-binding domain GO:0003677 G3DSA:4.10.520.10|PF00216|SM00411|SSF47729 BKD09_RS18445 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003111|IPR003593|IPR003959|IPR004815|IPR008268|IPR008269|IPR014721|IPR015947|IPR020568|IPR027417|IPR027543 AAA+ ATPase domain|ATP-dependent protease La (LON), substrate-binding domain|ATPase, AAA-type, core|Lon protease, bacterial|Lon protease, bacterial/eukaryotic-type|P-loop containing nucleoside triphosphate hydrolase|PUA-like domain|Peptidase S16, Lon C-terminal|Peptidase S16, active site|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 G3DSA:1.10.8.60|G3DSA:3.30.230.10|G3DSA:3.40.50.300|MF_01973|PF00004|PF02190|PF05362|PIRSF001174|PR00830|PS01046|SM00382|SM00464|SSF52540|SSF54211|SSF88697|TIGR00763 BKD09_RS18450 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002068|IPR008978 Alpha crystallin/Hsp20 domain|HSP20-like chaperone G3DSA:2.60.40.790|PF00011|SSF49764 BKD09_RS18455 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009078|IPR010287|IPR012347 Domain of unknown function DUF892|Ferritin-like superfamily|Ferritin-related G3DSA:1.20.1260.10|PF05974|SSF47240 BKD09_RS18460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 PF01914|TIGR00427 BKD09_RS18465 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001303 Class II aldolase/adducin N-terminal G3DSA:3.40.225.10|PF00596|SM01007|SSF53639 BKD09_RS18470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001807|IPR014743 Chloride channel, core|Chloride channel, voltage gated GO:0005216|GO:0005247|GO:0006821|GO:0016020|GO:0055085 G3DSA:1.10.3080.10|G3DSA:3.10.580.10|PF00654|SSF54631|SSF81340 BKD09_RS18485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021529 Protein of unknown function DUF2798 PF11391 BKD09_RS18495 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002549 Transmembrane protein TqsA-like PF01594 BKD09_RS18515 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR024532|IPR029000 Cyclophilin-like domain|Protein of unknown function DUF3830 PF12903|SSF50891 BKD09_RS18520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002509|IPR011330|IPR017625 Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain|Putative urate catabolism protein GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF01522|SSF88713|TIGR03212 BKD09_RS18525 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014306|IPR017580|IPR018020|IPR023416|IPR023418 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1|Hydroxyisourate hydrolase|Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase|Transthyretin, thyroxine binding site|Transthyretin/hydroxyisourate hydrolase, superfamily GO:0006144|GO:0019428|GO:0033971 G3DSA:1.10.3330.10|G3DSA:2.60.40.180|PF00576|PF09349|PS00768|SSF158694|SSF49472|TIGR02962|TIGR03164 BKD09_RS18530 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000674|IPR001041|IPR002888|IPR006058|IPR008274|IPR012675 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding|Beta-grasp domain|[2Fe-2S]-binding GO:0009055|GO:0016491|GO:0046872|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.150.120|G3DSA:3.10.20.30|G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF00111|PF01315|PF01799|PF02738|PS00197|SM01008|SSF47741|SSF54292|SSF54665|SSF56003 BKD09_RS18535 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002346|IPR016166|IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD-binding, type 2|Molybdopterin dehydrogenase, FAD-binding GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.30.465.10|PF00941|SSF56176 BKD09_RS18540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|SSF51338|SSF51556 BKD09_RS18545 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003760|IPR028082 ABC transporter substrate-binding protein PnrA-like|Periplasmic binding protein-like I GO:0005886 G3DSA:3.40.50.2300|PF02608|SSF53822 BKD09_RS18550 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS18555 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS18560 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS18570 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002125|IPR016193 Cytidine and deoxycytidylate deaminases, zinc-binding|Cytidine deaminase-like GO:0003824|GO:0008270 G3DSA:3.40.140.10|PF00383|SSF53927 BKD09_RS18575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|SM00382|SSF52540 BKD09_RS18580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|PF00857|SSF52499 BKD09_RS18585 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS18590 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS18595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 G3DSA:3.40.50.2300|PF02608 BKD09_RS18600 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002933|IPR010158|IPR011650 Amidase, carbamoylase-type|Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787|GO:0016813 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PIRSF001235|SSF53187|SSF55031|TIGR01879 BKD09_RS18610 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001991|IPR018107 Sodium:dicarboxylate symporter|Sodium:dicarboxylate symporter, conserved site GO:0015293|GO:0016021 G3DSA:1.10.3860.10|PF00375|PR00173|PS00714|SSF118215 BKD09_RS18630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002035|IPR008912|IPR011195 Uncharacterised conserved protein UCP010256|Uncharacterised protein family CoxE-like|von Willebrand factor, type A PF05762|PIRSF010256|SSF53300 BKD09_RS18635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003593|IPR003959|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF00004|SM00382|SSF52540 BKD09_RS18645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002364|IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain|Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PS01162|SM00829|SSF50129|SSF51735 BKD09_RS18655 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010982|IPR015927|IPR019759|IPR028360 Lambda repressor-like, DNA-binding domain|Peptidase S24/S26, beta-ribbon domain|Peptidase S24/S26A/S26B|Peptidase S24/S26A/S26B/S26C GO:0003677 G3DSA:1.10.260.40|G3DSA:2.10.109.10|PF00717|SSF47413|SSF51306 BKD09_RS18660 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011681 GcrA cell cycle regulator PF07750 BKD09_RS18685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010234|IPR018968 Phasin|Phasin, subfamily 2 PF09361|TIGR01985 BKD09_RS18690 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF00561|SSF53474 BKD09_RS18695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000184|IPR013686 Bacterial surface antigen (D15)|Polypeptide-transport-associated, ShlB-type GO:0019867 G3DSA:2.40.160.50|G3DSA:3.10.20.310|PF01103|PF08479 BKD09_RS18700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006860 FecR protein PF04773 BKD09_RS18705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR000160|IPR001633|IPR007890|IPR029787 CHASE2|EAL domain|GGDEF domain|Nucleotide cyclase|PAS domain G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00563|PF00990|PF05226|PF13426|SM00052|SM00091|SM00267|SM01080|SSF141868|SSF55073|SSF55785|TIGR00229|TIGR00254 BKD09_RS18715 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006035|IPR014033|IPR020855|IPR023696 Arginase|Ureohydrolase|Ureohydrolase domain|Ureohydrolase, manganese-binding site GO:0004053|GO:0006525|GO:0016813|GO:0046872 G3DSA:3.40.800.10|PF00491|PR00116|PS01053|SSF52768|TIGR01229 BKD09_RS18720 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000572|IPR005066|IPR008335|IPR014756|IPR030835 Eukaryotic molybdopterin oxidoreductase|Immunoglobulin E-set|Moybdenum cofactor oxidoreductase, dimerisation|Oxidoreductase, molybdopterin-binding domain|Sulfite dehydrogenase SoxC GO:0016491|GO:0030151|GO:0042128|GO:0055114 G3DSA:2.60.40.650|G3DSA:3.90.420.10|PF00174|PF03404|PR00407|SSF56524|SSF81296|TIGR04555 BKD09_RS18725 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|SSF46626 BKD09_RS18735 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 PF01566 BKD09_RS18740 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR022037 Protein of unknown function DUF3606 PF12244 BKD09_RS18790 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003738 SOS response associated peptidase (SRAP) G3DSA:3.90.1680.10|PF02586|SSF143081 BKD09_RS18795 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371 BKD09_RS18805 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011051 RmlC-like cupin domain SSF51182 BKD09_RS18810 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029151|IPR033462 Cache 3/Cache 2 fusion domain|Periplasmic sensor domain-like PF17201|SSF103190 BKD09_RS18825 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR010982 Homeodomain-like|Lambda repressor-like, DNA-binding domain GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.260.40|SSF47413 BKD09_RS18830 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005546|IPR011250|IPR027385 Autotransporter beta-domain|Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF103515 BKD09_RS18840 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002656 Acyltransferase 3 GO:0016747 PF01757 BKD09_RS18850 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002938|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain GO:0016491|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF01494|PR00420|SSF51905 BKD09_RS18855 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 BKD09_RS18870 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|SSF89796 BKD09_RS18875 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009075|IPR009100|IPR013107|IPR013786 Acyl-CoA dehydrogenase, C-terminal domain|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF02771|PF08028|PIRSF016578|SSF47203|SSF56645 BKD09_RS18880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002563|IPR012349 FMN-binding split barrel|Flavin reductase like domain GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF01613|SM00903|SSF50475 BKD09_RS18885 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006115|IPR008927|IPR013328|IPR015815|IPR016040|IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain|3-hydroxyisobutyrate dehydrogenase-related|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, NADP-binding|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0004616|GO:0016491|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF03446|PF14833|PIRSF000103|SSF48179|SSF51735 BKD09_RS18890 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015168 SsuA/THI5-like G3DSA:3.40.190.10|PF09084|SSF53850 BKD09_RS18895 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000581|IPR004404|IPR015928|IPR020558 Aconitase/3-isopropylmalate dehydratase, swivel|Dihydroxy-acid dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0004160|GO:0008152|GO:0009082 MF_00012|PF00920|PS00886|PS00887|SSF143975|SSF52016 BKD09_RS18900 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS18905 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS18910 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS18915 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic SSF144052 BKD09_RS18920 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006108|IPR006176|IPR008927|IPR013328|IPR016040|IPR022694 3-hydroxyacyl-CoA dehydrogenase|3-hydroxyacyl-CoA dehydrogenase, C-terminal|3-hydroxyacyl-CoA dehydrogenase, NAD binding|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0003857|GO:0006631|GO:0016491|GO:0055114|GO:0070403 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF00725|PF02737|PIRSF000105|SSF48179|SSF51735 BKD09_RS18925 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003421|IPR008927|IPR011128|IPR013328|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal|NAD(P)-binding domain|Opine dehydrogenase GO:0016491|GO:0016616|GO:0046168|GO:0050662|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF01210|PF02317|SSF48179|SSF51735 BKD09_RS18930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801 BKD09_RS18935 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006091|IPR009075|IPR009100|IPR013107|IPR013786 Acyl-CoA dehydrogenase, C-terminal domain|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF02770|PF02771|PF08028|SSF47203|SSF56645 BKD09_RS18940 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|PR00111|SSF53474 BKD09_RS18945 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|SM00822|SSF51735 BKD09_RS18950 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001753|IPR018376|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily|Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|PS00166|SSF52096 BKD09_RS18955 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002938|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain GO:0016491|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF01494|PR00420|SSF51905|SSF54373 BKD09_RS18960 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 BKD09_RS18965 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000709|IPR028081|IPR028082 Leu/Ile/Val-binding protein|Leucine-binding protein domain|Periplasmic binding protein-like I GO:0006865 G3DSA:3.40.50.2300|PF13458|PR00337|SSF53822 BKD09_RS18970 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000835|IPR011991|IPR023187 MarR-type HTH domain|Transcriptional regulator MarR-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12802|PR00598|PS01117|SM00347|SSF46785 BKD09_RS18975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR011957|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase|Benzoate-CoA ligase family GO:0003824|GO:0005524|GO:0008152|GO:0016405 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801|TIGR02262 BKD09_RS18980 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006175|IPR013813 Endoribonuclease L-PSP/chorismate mutase-like|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|SSF55298 BKD09_RS18985 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000644|IPR007055|IPR017080 BON domain|CBS domain|Uncharacterised conserved protein UCP036990, CBS, BON G3DSA:3.10.580.10|PF00571|PF04972|PIRSF036990|SM00116|SSF54631 BKD09_RS18990 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007899 CHAD domain PF05235|SM00880 BKD09_RS18995 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002575|IPR011009|IPR027417 Aminoglycoside phosphotransferase|P-loop containing nucleoside triphosphate hydrolase|Protein kinase-like domain G3DSA:3.40.50.300|G3DSA:3.90.1200.10|PF01636|PF13671|SSF52540|SSF56112 BKD09_RS19000 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|SSF52402 BKD09_RS19005 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR003781|IPR016040|IPR016102|IPR016181|IPR032875 Acyl-CoA N-acyltransferase|CoA-binding|GNAT domain|NAD(P)-binding domain|Succinyl-CoA synthetase-like|Succinyl-CoA synthetase-like, flavodoxin domain GO:0008080|GO:0048037 G3DSA:3.40.50.261|G3DSA:3.40.50.720|G3DSA:3.40.630.30|PF13302|PF13380|PF13549|PF13607|SM00881|SSF51735|SSF52210|SSF55729|SSF56059 BKD09_RS19020 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002645|IPR003453|IPR030802 ABC transport permease subunit MlaE, Proteobacteria|ABC transporter permease MalE|STAS domain GO:0006810|GO:0043190 G3DSA:3.30.750.24|PF02405|PF13466|SSF52091|TIGR00056 BKD09_RS19025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|SM00382|SSF52540 BKD09_RS19030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003399|IPR005586 ABC-type transport auxiliary lipoprotein component|Mce/MlaD G3DSA:3.40.50.10610|PF02470|PF03886|SSF159594 BKD09_RS19035 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018335|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Transcription regulator HTH, Crp-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0005622|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|PR00034|PS00042|SM00100|SM00419|SSF46785|SSF51206 BKD09_RS19040 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018488|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding, conserved site|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|PS00889|SM00100|SM00419|SSF46785|SSF51206 BKD09_RS19045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 G3DSA:3.50.30.50|PF04199|SSF102198 BKD09_RS19050 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004682|IPR018389 TRAP transporter solute receptor DctP/TeaA|TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 PF03480|PIRSF006470|SSF53850|TIGR00787 BKD09_RS19055 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290 BKD09_RS19060 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004681|IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein GO:0016021 PF06808|PIRSF006066|TIGR00786 BKD09_RS19065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00081|PS00061|SSF51735 BKD09_RS19070 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.40.190.10|PF13531|SSF53850 BKD09_RS19075 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000674|IPR008274|IPR012368 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding|Oxidoreductase molybdopterin-binding subunit, IorB-related GO:0016491|GO:0055114 G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF02738|PIRSF036389|SM01008|SSF56003 BKD09_RS19080 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001041|IPR002888|IPR006058|IPR012675 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|[2Fe-2S]-binding GO:0009055|GO:0016491|GO:0046872|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.150.120|G3DSA:3.10.20.30|PF00111|PF01799|PS00197|SSF47741|SSF54292 BKD09_RS19085 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 BKD09_RS19090 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006656|IPR006657|IPR006963|IPR009010 Aspartate decarboxylase-like domain|Molybdopterin dinucleotide-binding domain|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0030151|GO:0055114 G3DSA:2.20.25.90|G3DSA:2.40.40.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|PF00384|PF01568|PF04879|SM00926|SSF50692|SSF53706 BKD09_RS19095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001753|IPR014748|IPR029045 ClpP/crotonase-like domain|Crontonase, C-terminal|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:1.10.12.10|G3DSA:3.90.226.10|PF00378|SSF52096 BKD09_RS19110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|SSF56300 BKD09_RS19140 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.30.470.30|SSF56091 BKD09_RS19150 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025159 Transcriptional regulator, AbiEi antitoxin PF13338 BKD09_RS19220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 G3DSA:3.40.50.1390|PF00239|SM00857|SSF53041 BKD09_RS19225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021937 Protein of unknown function DUF3551 PF12071 BKD09_RS19240 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010982|IPR014057 Addiction module antidote protein, HI1420|Lambda repressor-like, DNA-binding domain GO:0003677 G3DSA:1.10.260.40|TIGR02684 BKD09_RS19245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 BKD09_RS19250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371 BKD09_RS19260 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004299 Membrane bound O-acyl transferase, MBOAT PF03062 BKD09_RS19290 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021937 Protein of unknown function DUF3551 PF12071 BKD09_RS19335 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005624 Haem-degrading PF03928|SSF143744 BKD09_RS19340 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004113|IPR006094|IPR009051|IPR016164|IPR016166|IPR016167|IPR016169|IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Alpha-helical ferredoxin|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|FAD-linked oxidase, C-terminal|FAD-linked oxidase-like, C-terminal GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0051536|GO:0055114 G3DSA:1.10.1060.10|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF01565|PF02913|PF13183|PS00198|SSF46548|SSF55103|SSF56176 BKD09_RS19345 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|SM00345|SM00895|SSF46785|SSF48008 BKD09_RS19350 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000192|IPR015421|IPR015422|IPR015424|IPR024169 Aminotransferase class V domain|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|PIRSF000524|SSF53383 BKD09_RS19360 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000192|IPR015421|IPR015422|IPR015424|IPR024169 Aminotransferase class V domain|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|PIRSF000524|SSF53383 BKD09_RS19365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001753|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|SSF52096 BKD09_RS19370 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000045|IPR014032 Peptidase A24A, prepilin type IV, bacterial|Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 PF01478|PR00864 BKD09_RS19375 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082 BKD09_RS19380 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009936 Protein of unknown function DUF1468 PF07331 BKD09_RS19385 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002823 Protein of unknown function DUF112, transmembrane PF01970 BKD09_RS19400 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001577|IPR024079 Metallopeptidase, catalytic domain|Peptidase M8, leishmanolysin GO:0004222|GO:0006508|GO:0007155|GO:0008237|GO:0016020 G3DSA:3.40.390.10|G3DSA:3.90.132.10|PF01457|SSF55486 BKD09_RS19410 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|SSF89796 BKD09_RS19420 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004843|IPR013320|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Concanavalin A-like lectin/glucanase domain|Metallo-dependent phosphatase-like GO:0016787 G3DSA:2.60.120.200|G3DSA:3.60.21.10|PF00149|SSF49899|SSF56300 BKD09_RS19425 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR030930 Adhesin of bacterial autotransporter system TIGR04415 BKD09_RS19440 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic PF13440 BKD09_RS19445 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001962|IPR006426|IPR014729|IPR017932|IPR029055 Asparagine synthase|Asparagine synthase, glutamine-hydrolyzing|Glutamine amidotransferase type 2 domain|Nucleophile aminohydrolases, N-terminal|Rossmann-like alpha/beta/alpha sandwich fold GO:0004066|GO:0006529 G3DSA:3.40.50.620|G3DSA:3.60.20.10|PF00733|PF13537|PIRSF001589|SSF52402|SSF56235|TIGR01536 BKD09_RS19450 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic PF13524 BKD09_RS19455 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001451|IPR011004|IPR018357 Hexapeptide repeat|Hexapeptide transferase, conserved site|Trimeric LpxA-like GO:0016740 G3DSA:2.160.10.10|PF00132|PS00101|SSF51161 BKD09_RS19460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|SSF53335 BKD09_RS19465 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|SSF51735 BKD09_RS19470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001296 Glycosyl transferase, family 1 G3DSA:3.40.50.2000|PF00534|SSF53756 BKD09_RS19480 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005835|IPR013446|IPR029044 Glucose-1-phosphate cytidylyltransferase|Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain GO:0009058|GO:0016779|GO:0047343 G3DSA:3.90.550.10|PF00483|SSF53448|TIGR02623 BKD09_RS19485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013445|IPR016040 CDP-glucose 4,6-dehydratase|NAD(P)-binding domain G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF16363|SSF51735|TIGR02622 BKD09_RS19490 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000644|IPR013785 Aldolase-type TIM barrel|CBS domain GO:0003824 G3DSA:3.20.20.70|PF00571|SM00116|SSF54631 BKD09_RS19495 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001818|IPR006026|IPR011049|IPR013858|IPR018511|IPR024079 Hemolysin-type calcium-binding conserved site|Metallopeptidase, catalytic domain|Peptidase M10 serralysin, C-terminal|Peptidase M10, metallopeptidase|Peptidase, metallopeptidase|Serralysin-like metalloprotease, C-terminal GO:0004222|GO:0005509|GO:0005615|GO:0006508|GO:0008237|GO:0008270|GO:0031012 G3DSA:2.150.10.10|G3DSA:3.40.390.10|PF00413|PF08548|PR00313|PS00330|SM00235|SSF51120|SSF55486 BKD09_RS19500 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002656|IPR013830 Acyltransferase 3|SGNH hydrolase-type esterase domain GO:0016747 G3DSA:3.40.50.1110|PF01757|SSF52266 BKD09_RS19505 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013630|IPR013691|IPR029063 C-methyltransferase|Methyltransferase putative zinc binding domain|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF08421|PF08484|PF13489|SSF53335 BKD09_RS19510 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|SSF53448 BKD09_RS19515 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 PF04138 BKD09_RS19520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|SSF53335 BKD09_RS19555 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF13439|PF13692|SSF53756 BKD09_RS19560 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001962|IPR006426|IPR014729|IPR017932|IPR029055 Asparagine synthase|Asparagine synthase, glutamine-hydrolyzing|Glutamine amidotransferase type 2 domain|Nucleophile aminohydrolases, N-terminal|Rossmann-like alpha/beta/alpha sandwich fold GO:0004066|GO:0006529 G3DSA:3.40.50.620|G3DSA:3.60.20.10|PF00733|PF13537|PIRSF001589|SSF52402|SSF56235|TIGR01536 BKD09_RS19565 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008397|IPR008929|IPR012480|IPR031680 Alginate lyase domain|Chondroitin AC/alginate lyase|Heparin-sulfate lyase, N-terminal|Heparinase II/III-like GO:0016829|GO:0042597 G3DSA:1.50.10.110|PF07940|PF16889|SSF48230 BKD09_RS19570 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002797 Polysaccharide biosynthesis protein GO:0016020 PF01943 BKD09_RS19575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|SSF53335 BKD09_RS19580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008929|IPR012480|IPR031680 Chondroitin AC/alginate lyase|Heparin-sulfate lyase, N-terminal|Heparinase II/III-like GO:0016829 PF07940|PF16889|SSF48230 BKD09_RS19585 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13579|SSF53756 BKD09_RS19590 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003331|IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like|UDP-N-acetylglucosamine 2-epimerase domain GO:0008761 G3DSA:3.40.50.2000|PF02350|SSF53756|TIGR00236 BKD09_RS19595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001732|IPR008927|IPR014026|IPR014027|IPR016040|IPR017476|IPR028359 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase, C-terminal|UDP-glucose/GDP-mannose dehydrogenase, N-terminal|UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0000271|GO:0016616|GO:0016628|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF00984|PF03720|PF03721|PIRSF000124|PIRSF500136|SM00984|SSF48179|SSF51735|SSF52413|TIGR03026 BKD09_RS19600 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000683|IPR011032|IPR013149|IPR016040|IPR020843 Alcohol dehydrogenase, C-terminal|GroES-like|NAD(P)-binding domain|Oxidoreductase, N-terminal|Polyketide synthase, enoylreductase domain GO:0016491|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF01408|SM00829|SSF50129|SSF51735|SSF55347 BKD09_RS19605 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003696|IPR031730 Carbamoyltransferase|Carbamoyltransferase, C-terminal GO:0003824|GO:0009058 PF02543|PF16861|SSF53067 BKD09_RS19615 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004446|IPR006543|IPR006549|IPR023214 D,D-heptose 1,7-bisphosphate phosphatase|HAD-like domain|HAD-superfamily hydrolase,subfamily IIIA|Histidinol-phosphate phosphatase GO:0005975|GO:0016791 G3DSA:3.40.50.1000|PF13242|PIRSF004682|SSF56784|TIGR01656|TIGR01662 BKD09_RS19620 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032816 SNARE associated Golgi protein PF09335 BKD09_RS19630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|SSF56801 BKD09_RS19635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008928|IPR012341 Six-hairpin glycosidase|Six-hairpin glycosidase-like GO:0003824 G3DSA:1.50.10.10|PF07221|SSF48208 BKD09_RS19640 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS19645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS19650 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS19655 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS19660 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR020845 AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PS00455|SSF56801 BKD09_RS19665 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|SM00382|SSF52540 BKD09_RS19670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|SM00100|SM00419|SSF46785|SSF51206 BKD09_RS19675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS19680 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR011990|IPR019734|IPR027417|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|Nucleotide cyclase|P-loop containing nucleoside triphosphate hydrolase|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515|GO:0009190|GO:0016849|GO:0035556 G3DSA:1.25.40.10|G3DSA:3.30.70.1230|G3DSA:3.40.50.300|PF00211|PF13191|PF13424|SM00028|SM00044|SSF48452|SSF52540|SSF55073 BKD09_RS19685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000866|IPR012336 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF00578|SSF52833 BKD09_RS19690 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 G3DSA:3.40.50.10090|PF02602|SSF69618 BKD09_RS19695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002376|IPR002912|IPR004810 ACT domain|Formyl transferase, N-terminal|Formyltetrahydrofolate deformylase GO:0006189|GO:0008152|GO:0008864|GO:0009058|GO:0016597|GO:0016742 G3DSA:3.30.70.260|G3DSA:3.40.50.170|MF_01927|PF00551|PF01842|PIRSF036480|PR01575|SSF53328|SSF55021|TIGR00655 BKD09_RS19705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS19710 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS19715 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS19720 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|SM00382|SSF52540 BKD09_RS19725 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS19730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 G3DSA:3.20.20.210|PF01717|SSF51726 BKD09_RS19735 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011990|IPR015917|IPR019734|IPR029030 Caspase-like domain|Peptidase C14A, caspase catalytic domain|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515|GO:0006915|GO:0008234 G3DSA:1.25.40.10|G3DSA:3.40.50.1460|PF00656|PF13432|SM00028|SM00115|SSF48452|SSF52129 BKD09_RS19740 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|SSF53335 BKD09_RS19745 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002133|IPR022628|IPR022629|IPR022630|IPR022631|IPR022636 S-adenosylmethionine synthetase|S-adenosylmethionine synthetase superfamily|S-adenosylmethionine synthetase, C-terminal|S-adenosylmethionine synthetase, N-terminal|S-adenosylmethionine synthetase, central domain|S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0005524|GO:0006556 G3DSA:3.30.300.10|PF00438|PF02772|PF02773|PIRSF000497|PS00376|PS00377|SSF55973|TIGR01034 BKD09_RS19750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000043|IPR015878|IPR016040|IPR020082 Adenosylhomocysteinase|NAD(P)-binding domain|S-adenosyl-L-homocysteine hydrolase, NAD binding domain|S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 G3DSA:3.40.50.1480|G3DSA:3.40.50.720|MF_00563|PF00670|PF05221|PIRSF001109|PS00738|PS00739|SM00996|SM00997|SSF51735|SSF52283|TIGR00936 BKD09_RS19755 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009959|IPR032710 NTF2-like domain|Polyketide cyclase SnoaL-like domain G3DSA:3.10.450.50|PF12680|SSF54427 BKD09_RS19760 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR020946|IPR023753 FAD/NAD(P)-binding domain|Flavin monooxygenase-like GO:0004499|GO:0016491|GO:0050660|GO:0050661|GO:0055114 G3DSA:3.50.50.60|PF00743|PF13450|SSF51905 BKD09_RS19765 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010645|IPR020846 Major facilitator superfamily domain|Uncharacterised MFS-type transporter YbfB G3DSA:1.20.1250.20|PF06779|SSF103473 BKD09_RS19770 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004370|IPR014347|IPR018191 4-oxalocrotonate tautomerase|4-oxalocrotonate tautomerase, Pseudomonas-type|Tautomerase/MIF superfamily GO:0006725|GO:0016853 G3DSA:3.30.429.20|PF01361|SSF55331|TIGR00013 BKD09_RS19775 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00080|PR00081|SSF51735 BKD09_RS19780 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 BKD09_RS19795 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007803|IPR027443 Aspartyl/asparaginy/proline hydroxylase|Isopenicillin N synthase-like GO:0018193 G3DSA:2.60.120.330|PF05118|SSF51197 BKD09_RS19800 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001048 Aspartate/glutamate/uridylate kinase G3DSA:3.40.1160.10|PF00696|SSF53633 BKD09_RS19805 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001048|IPR030669 Aspartate/glutamate/uridylate kinase|Molybdenum storage protein subunit alpha/beta GO:0005737|GO:0030151 G3DSA:3.40.1160.10|PF00696|PIRSF039097|SSF53633 BKD09_RS19810 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009959|IPR032710 NTF2-like domain|Polyketide cyclase SnoaL-like domain G3DSA:3.10.450.50|PF13474|SSF54427 BKD09_RS19815 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000123|IPR000477|IPR013597|IPR030931 Group II intron reverse transcriptase/maturase|Group II intron, maturase-specific|RNA-directed DNA polymerase (reverse transcriptase), msDNA|Reverse transcriptase domain GO:0003723|GO:0003964|GO:0006278 PF00078|PF08388|PR00866|SSF56672|TIGR04416 BKD09_RS19820 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 G3DSA:3.90.850.10|PF01557|SSF56529 BKD09_RS19825 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|SM00382|SSF52540|SSF90123 BKD09_RS19830 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001509|IPR005886|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain|UDP-glucose 4-epimerase GalE GO:0003824|GO:0003978|GO:0006012|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|SSF51735|TIGR01179 BKD09_RS19835 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001296 Glycosyl transferase, family 1 G3DSA:3.40.50.2000|PF00534|SSF53756 BKD09_RS19845 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011008 Dimeric alpha-beta barrel G3DSA:3.30.70.900|SSF54909 BKD09_RS19850 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002201|IPR011910 Glycosyl transferase, family 9|Lipopolysaccharide heptosyltransferase II GO:0008152|GO:0009103|GO:0016757 G3DSA:3.40.50.2000|PF01075|SSF53756|TIGR02195 BKD09_RS19855 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001509|IPR011912|IPR016040 ADP-L-glycero-D-manno-heptose-6-epimerase|NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0005975|GO:0008712|GO:0050661|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|SSF51735|TIGR02197 BKD09_RS19860 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002173|IPR004821|IPR011611|IPR011913|IPR011914|IPR014729|IPR023030|IPR029056 Bifunctional protein HldE|Carbohydrate kinase PfkB|Carbohydrate/puine kinase, PfkB, conserved site|Cytidyltransferase-like domain|RfaE bifunctional protein, domain I|RfaE bifunctional protein, domain II|Ribokinase-like|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0005975|GO:0009058|GO:0016773|GO:0016779 G3DSA:3.40.1190.20|G3DSA:3.40.50.620|MF_01603|PF00294|PF01467|PS00583|PS00584|SSF52374|SSF53613|TIGR00125|TIGR02198|TIGR02199 BKD09_RS19865 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007016 O-antigen ligase-related PF04932 BKD09_RS19870 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003869|IPR016040 NAD(P)-binding domain|Polysaccharide biosynthesis protein, CapD-like domain G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF02719|SSF51735 BKD09_RS19875 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|SSF53756 BKD09_RS19880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001509|IPR002347|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain|Short-chain dehydrogenase/reductase SDR GO:0003824|GO:0050662 G3DSA:3.40.50.720|PF01370|PR00081|SSF51735 BKD09_RS19885 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 PF00953 BKD09_RS19890 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD PF03706 BKD09_RS19895 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001509|IPR008089|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain|Nucleotide sugar epimerase GO:0003824|GO:0005975|GO:0016857|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|PR01713|SSF51735 BKD09_RS19900 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001538|IPR005835|IPR006375|IPR011051|IPR014710|IPR029044 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase|Mannose-6-phosphate isomerase, type II, C-terminal|Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0000271|GO:0005976|GO:0009058|GO:0016779 G3DSA:2.60.120.10|G3DSA:3.90.550.10|PF00483|PF01050|SSF51182|SSF53448|TIGR01479 BKD09_RS19905 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000683|IPR004104|IPR016040 NAD(P)-binding domain|Oxidoreductase, C-terminal|Oxidoreductase, N-terminal GO:0008152|GO:0016491|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01408|PF02894|SSF51735|SSF55347 BKD09_RS19910 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000653|IPR015421|IPR015422|IPR015424 DegT/DnrJ/EryC1/StrS aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01041|PIRSF000390|SSF53383 BKD09_RS19915 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004268 Peptidoglycan biosynthesis protein MurJ PF03023|PIRSF002869|PR01806|TIGR01695 BKD09_RS19920 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR011990|IPR011991|IPR016032|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Signal transduction response regulator, C-terminal effector|Tetratricopeptide-like helical domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0005515|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.25.40.10|G3DSA:3.40.50.300|PF00196|PF13191|PR00038|PS00622|SM00421|SSF46894|SSF48452|SSF52540 BKD09_RS19925 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013094|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 G3DSA:3.40.50.1820|PF07859|SSF53474 BKD09_RS19930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|SM00829|SSF50129|SSF51735 BKD09_RS19935 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009506 Protein of unknown function DUF1127 PF06568 BKD09_RS19940 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000674|IPR008274 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF01315|PF02738|SM01008|SSF54665|SSF56003 BKD09_RS19945 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002321|IPR010980|IPR012127 Cytochrome c prime|Cytochrome c, class II|Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 G3DSA:1.20.120.10|PF01322|PIRSF000027|SSF47175 BKD09_RS19955 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000277|IPR015421|IPR015422|IPR015424 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01053|PIRSF001434|PS00868|SSF53383 BKD09_RS19960 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009506 Protein of unknown function DUF1127 PF06568 BKD09_RS19965 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001867|IPR011990|IPR011991|IPR016032|IPR019734 OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Tetratricopeptide repeat|Tetratricopeptide-like helical domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0005515|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.25.40.10|PF00486|SM00028|SM00862|SSF46894|SSF48452 BKD09_RS19970 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010895 CHRD PF07452|SM00754 BKD09_RS19975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009056|IPR014353 Cytochrome c-like domain|Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0009055|GO:0016020|GO:0016614|GO:0020037 G3DSA:1.10.760.10|PF00034|PF13442|PIRSF000018|SSF46626 BKD09_RS19980 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371 BKD09_RS19985 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009959|IPR011944|IPR032710 NTF2-like domain|Polyketide cyclase SnoaL-like domain|Steroid delta5-4-isomerase G3DSA:3.10.450.50|PF13474|SSF54427|TIGR02246 BKD09_RS19990 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010297|IPR029058 Alpha/Beta hydrolase fold|Protein of unknown function DUF900, hydrolase-like G3DSA:3.40.50.1820|PF05990|SSF53474 BKD09_RS19995 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007343 Uncharacterised protein family, zinc metallopeptidase putative PF04228 BKD09_RS20000 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004291 Transposase, IS66 PF03050|PF13817 BKD09_RS20005 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011008|IPR019887 Dimeric alpha-beta barrel|Transcription regulator AsnC/Lrp, ligand binding domain G3DSA:3.30.70.920|PF01037|SSF54909 BKD09_RS20010 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004399|IPR013749|IPR029056 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase|Pyridoxamine kinase/Phosphomethylpyrimidine kinase|Ribokinase-like GO:0008972|GO:0009228 G3DSA:3.40.1190.20|PF08543|SSF53613|TIGR00097 BKD09_RS20015 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|SSF56300 BKD09_RS20020 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF13439|PF13692|SSF53756 BKD09_RS20025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000634|IPR001926 Serine/threonine dehydratase, pyridoxal-phosphate-binding site|Tryptophan synthase beta subunit-like PLP-dependent enzyme GO:0006520|GO:0030170 G3DSA:3.40.50.1100|PF00291|PS00165|SSF53686 BKD09_RS20030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015917|IPR029030 Caspase-like domain|Peptidase C14A, caspase catalytic domain GO:0006915|GO:0008234 G3DSA:3.40.50.1460|PF00656|PR00376|SM00115|SSF52129 BKD09_RS20035 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 PF02690 BKD09_RS20045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SSF51735 BKD09_RS20055 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR020846|IPR024989|IPR026032 Major facilitator superfamily associated domain|Major facilitator superfamily domain|Probable 3-phenylpropionic acid transporter G3DSA:1.20.1250.20|PF12832|PIRSF004925|SSF103473 BKD09_RS20060 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013341|IPR013342|IPR029017|IPR029065 Enolase C-terminal domain-like|Enolase N-terminal domain-like|Mandelate racemase/muconate lactonizing enzyme, C-terminal|Mandelate racemase/muconate lactonizing enzyme, N-terminal domain G3DSA:3.20.20.120|G3DSA:3.30.390.10|PF02746|PF13378|SM00922|SSF51604|SSF54826 BKD09_RS20065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002645|IPR003453|IPR030802 ABC transport permease subunit MlaE, Proteobacteria|ABC transporter permease MalE|STAS domain GO:0006810|GO:0043190 G3DSA:3.30.750.24|PF02405|SSF52091|TIGR00056 BKD09_RS20070 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS20075 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003399 Mce/MlaD PF02470 BKD09_RS20080 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 G3DSA:1.20.120.20|PF01442|SSF58113 BKD09_RS20090 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 G3DSA:1.20.120.160|PF01627|SSF47226 BKD09_RS20095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001041|IPR001055|IPR012675|IPR018298 2Fe-2S ferredoxin-type iron-sulfur binding domain|Adrenodoxin|Adrenodoxin, iron-sulphur binding site|Beta-grasp domain GO:0009055|GO:0051536|GO:0051537 G3DSA:3.10.20.30|PF00111|PR00355|PS00814|SSF54292 BKD09_RS20100 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029069 HotDog domain G3DSA:3.10.129.10|PF13279|SSF54637 BKD09_RS20105 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000103|IPR022890|IPR023753 FAD/NAD(P)-binding domain|Ferredoxin--NADP reductase, type 2|Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0004324|GO:0016491|GO:0055114 G3DSA:3.50.50.60|MF_01685|PF07992|PR00368|PR00469|SSF51905 BKD09_RS20110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019223 Domain of unknown function DUF2147 PF09917 BKD09_RS20125 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000531|IPR010105|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|SSF56935|TIGR01783 BKD09_RS20130 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002577|IPR011991 Helix-turn-helix, HxlR type|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF01638|SSF46785 BKD09_RS20135 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011042|IPR017996 Major royal jelly protein/protein yellow|Six-bladed beta-propeller, TolB-like G3DSA:2.120.10.30|PF03022|SSF101898 BKD09_RS20145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF02518|PR00344|SM00387|SM00388|SSF47384|SSF55874 BKD09_RS20150 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF46894|SSF52172 BKD09_RS20155 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010583 MltA-interacting MipA PF06629 BKD09_RS20165 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007392|IPR013974|IPR017654 D-galactarate/Altronate dehydratase, C-terminal|Galactarate dehydratase GarD-like|SAF domain GO:0008867|GO:0016829|GO:0046392 PF04295|PF08666|SM00858|TIGR03248 BKD09_RS20170 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015590|IPR016160|IPR016161|IPR016162|IPR016163|IPR029510 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|PS00687|SSF53720 BKD09_RS20175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013341|IPR013342|IPR017653|IPR029017|IPR029065 Enolase C-terminal domain-like|Enolase N-terminal domain-like|Glucarate dehydratase|Mandelate racemase/muconate lactonizing enzyme, C-terminal|Mandelate racemase/muconate lactonizing enzyme, N-terminal domain GO:0000287|GO:0008872|GO:0019394 G3DSA:3.20.20.120|G3DSA:3.30.390.10|PF02746|PF13378|SM00922|SSF51604|SSF54826|TIGR03247 BKD09_RS20180 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002220|IPR013785|IPR017655 5-dehydro-4-deoxyglucarate dehydratase|Aldolase-type TIM barrel|DapA-like GO:0003824|GO:0008152|GO:0016052|GO:0016829|GO:0047448 G3DSA:3.20.20.70|MF_00694|PF00701|PIRSF001365|SM01130|SSF51569|TIGR03249 BKD09_RS20185 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS20190 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000849|IPR004744|IPR011701|IPR020846 D-galactonate transporter|Major facilitator superfamily|Major facilitator superfamily domain|Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PIRSF002808|SSF103473|TIGR00893 BKD09_RS20195 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013830 SGNH hydrolase-type esterase domain G3DSA:3.40.50.1110|SSF52266 BKD09_RS20200 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD PF03706 BKD09_RS20205 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009078|IPR010287|IPR012347 Domain of unknown function DUF892|Ferritin-like superfamily|Ferritin-related G3DSA:1.20.1260.10|PF05974|SSF47240 BKD09_RS20210 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS20215 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR000160|IPR001633|IPR005330|IPR029787 EAL domain|GGDEF domain|MHYT domain|Nucleotide cyclase|PAS domain G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00563|PF00990|PF03707|PF12860|SM00052|SM00267|SSF141868|SSF55073|SSF55785|TIGR00254 BKD09_RS20230 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003848|IPR014729 Domain of unknown function DUF218|Rossmann-like alpha/beta/alpha sandwich fold G3DSA:3.40.50.620|PF02698 BKD09_RS20235 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR004839|IPR011991|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0003824|GO:0006355|GO:0009058|GO:0030170 G3DSA:1.10.10.10|G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PF00392|SM00345|SSF46785|SSF53383 BKD09_RS20240 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009506 Protein of unknown function DUF1127 PF06568 BKD09_RS20245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PR01438|SSF52402 BKD09_RS20250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013078|IPR029033 Histidine phosphatase superfamily|Histidine phosphatase superfamily, clade-1 G3DSA:3.40.50.1240|PF00300|SM00855|SSF53254 BKD09_RS20255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006076|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01266|SSF51905 BKD09_RS20260 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002579|IPR011057 Mss4-like|Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 G3DSA:2.170.150.20|PF01641|SSF51316|TIGR00357 BKD09_RS20265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001444|IPR010930|IPR011491|IPR020013 Fagellar hook-basal body protein, FlgE/F/G|Flagellar basal body rod protein, N-terminal|Flagellar basal-body/hook protein, C-terminal domain|Flagellar hook protein FlgE GO:0071973 PF00460|PF06429|PF07559|SSF117143|TIGR03506 BKD09_RS20270 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001444|IPR002371|IPR010930 Flagellar basal body rod protein, N-terminal|Flagellar basal-body/hook protein, C-terminal domain|Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780|GO:0071973 PF00460|PF06429|PR01005|SSF64518|TIGR02492 BKD09_RS20275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PF00669|SSF64518 BKD09_RS20280 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029044 Nucleotide-diphospho-sugar transferases SSF53448 BKD09_RS20285 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015421|IPR015424 Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 G3DSA:3.40.640.10|SSF53383 BKD09_RS20290 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 G3DSA:3.30.1490.20|SSF56059 BKD09_RS20295 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002129|IPR010977|IPR015421|IPR015422|IPR015424|IPR021115 Aromatic-L-amino-acid decarboxylase|Pyridoxal phosphate-dependent decarboxylase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Pyridoxal-phosphate binding site GO:0003824|GO:0006520|GO:0016831|GO:0019752|GO:0030170 G3DSA:1.20.1340.10|G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00282|PR00800|PS00392|SSF53383 BKD09_RS20300 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009967 Flagellum biosynthesis repressor FlbT GO:0006402|GO:0048027|GO:1902209 PF07378|PIRSF009533 BKD09_RS20305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 G3DSA:1.20.1330.10|PF00669|PF00700|SSF64518 BKD09_RS20310 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PF00669|PF00700|SSF64518 BKD09_RS20315 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010845 Flagellar FlaF GO:0044781 PF07309 BKD09_RS20320 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005186 FlaG protein G3DSA:3.30.160.170|SSF160214 BKD09_RS20330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019301 Flagellar protein FlgJ, N-terminal PF10135 BKD09_RS20335 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 MF_00416|PF02119|PR01010 BKD09_RS20340 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019704 Flagellar assembly regulator FliX, class II PF10768 BKD09_RS20345 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002577|IPR011991 Helix-turn-helix, HxlR type|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF01638|SSF46785 BKD09_RS20350 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016040 NAD(P)-binding domain G3DSA:3.40.50.720|PF13460|SSF51735 BKD09_RS20355 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000962|IPR012784|IPR020458 RNA polymerase-binding transcription factor DksA|Zinc finger, DksA/TraR C4-type|Zinc finger, DksA/TraR C4-type conserved site GO:0008270 MF_00926|PF01258|PS01102|SSF109635|SSF57716|TIGR02420 BKD09_RS20360 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002577|IPR011991 Helix-turn-helix, HxlR type|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF01638|SSF46785 BKD09_RS20365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|PF01370|SSF51735 BKD09_RS20370 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 G3DSA:3.90.850.10|PF01557|SSF56529 BKD09_RS20375 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 MF_00415|PF02107|PR01008 BKD09_RS20380 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013974|IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal|SAF domain PF13144|SM00858|TIGR03170 BKD09_RS20385 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001444|IPR010930|IPR012834|IPR019776|IPR020013 Fagellar hook-basal body protein, FlgE/F/G|Flagellar basal body rod protein, N-terminal|Flagellar basal body rod protein, conserved site|Flagellar basal-body rod FlgG|Flagellar basal-body/hook protein, C-terminal domain GO:0009426|GO:0071973 PF00460|PF06429|PS00588|SSF117143|TIGR02488|TIGR03506 BKD09_RS20390 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001444|IPR010930|IPR012836|IPR019776|IPR020013 Fagellar hook-basal body protein, FlgE/F/G|Flagellar basal body rod protein, N-terminal|Flagellar basal body rod protein, conserved site|Flagellar basal-body rod FlgF|Flagellar basal-body/hook protein, C-terminal domain GO:0030694|GO:0071973 PF00460|PF06429|PS00588|SSF117143|TIGR02490|TIGR03506 BKD09_RS20395 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 PF03748 BKD09_RS20400 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001543|IPR001689|IPR028976 CheC-like domain|Flagellar motor switch protein FliM|Surface presentation of antigen (SpoA) GO:0003774|GO:0009425|GO:0071973 G3DSA:2.30.330.10|PF01052|PF02154|PIRSF002888|PR00955|SSF101801|SSF103039|TIGR01397 BKD09_RS20410 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:1.25.60.10|SSF158791 BKD09_RS20420 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010221 VCBS repeat TIGR01965 BKD09_RS20425 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006860 FecR protein PF04773 BKD09_RS20430 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001440|IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide repeat 1|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF00515|PF13414|PF13432|SM00028|SSF48452 BKD09_RS20440 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SSF48452 BKD09_RS20450 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005837|IPR005838 Flagellar transport protein FliP|Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PF00813|PR00951|PR01302|PS01060|PS01061|TIGR01103 BKD09_RS20455 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 PF04347 BKD09_RS20460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 PIRSF002889 BKD09_RS20465 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001444|IPR006299|IPR010930 Flagellar basal body rod protein, N-terminal|Flagellar basal-body rod protein FlgC|Flagellar basal-body/hook protein, C-terminal domain GO:0030694|GO:0071973 PF00460|PF06429|TIGR01395 BKD09_RS20470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 MF_00724|PF02049|PR01006|TIGR00205 BKD09_RS20475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002191|IPR006305 Bacterial export protein family 3|Flagellar biosynthesis protein FliQ GO:0009306|GO:0016020|GO:0016021|GO:0044780 PF01313|PIRSF004669|PR00952|TIGR01402 BKD09_RS20480 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002010|IPR006303 Flagellar biosynthesis protein FliR|Type III secretion system inner membrane R protein GO:0006605|GO:0016020|GO:0016021|GO:0044780 PF01311|PR00953|TIGR01400 BKD09_RS20485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006135|IPR006136|IPR029025 Flagellar biosynthetic protein FlhB|Type III secretion system substrate exporter|Type III secretion system substrate exporter, C-terminal GO:0009306|GO:0015031|GO:0016020|GO:0016021|GO:0044780 G3DSA:3.40.1690.10|PF01312|PR00950|SSF160544|TIGR00328 BKD09_RS20490 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR001789|IPR003594|IPR003661|IPR004358|IPR011006|IPR013656|IPR013767 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0006355|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF00989|PF02518|PF08448|PF13426|PR00344|SM00091|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55785|SSF55874|TIGR00229 BKD09_RS20495 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007379|IPR032710 NTF2-like domain|Tim44-like domain PF04280|SM00978|SSF54427 BKD09_RS20500 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014085|IPR023631 Allophanate hydrolase|Amidase signature domain G3DSA:3.90.1300.10|PF01425|SSF75304|TIGR02713 BKD09_RS20505 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|SM00100|SM00419|SSF46785|SSF51206 BKD09_RS20510 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS20515 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS20520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001638|IPR015168 Solute-binding protein family 3/N-terminal domain of MltF|SsuA/THI5-like G3DSA:3.40.190.10|PF09084|SM00062|SSF53850 BKD09_RS20525 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010515|IPR016186|IPR016187 C-type lectin fold|C-type lectin-like|Collagenase NC10/endostatin GO:0005198|GO:0007155|GO:0031012 G3DSA:3.10.100.10|PF06482|SSF56436 BKD09_RS20530 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Thioredoxin-like fold G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF14497|SSF47616|SSF52833 BKD09_RS20535 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007318 Phospholipid methyltransferase PF04191 BKD09_RS20540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.20|PF00196|SM00421|SSF46894 BKD09_RS20555 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004646|IPR004647|IPR011167|IPR020557 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain|Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain|Fumarate lyase, conserved site|Iron-dependent fumarate hydratase GO:0003824|GO:0004333|GO:0006091|GO:0016829|GO:0016836 G3DSA:3.20.130.10|PF05681|PF05683|PIRSF001394|PS00163|SSF117457|TIGR00722|TIGR00723 BKD09_RS20560 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR022060 Protein of unknown function DUF3616 PF12275 BKD09_RS20575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006008 Intracellular septation protein A GO:0016021 PF04279 BKD09_RS20590 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004294 Carotenoid oxygenase GO:0016702|GO:0055114 PF03055 BKD09_RS20595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893|IPR025996 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal|WHG domain GO:0003677 G3DSA:1.10.357.10|PF00440|PF13305|SSF46689|SSF48498 BKD09_RS20605 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001214 SET domain GO:0005515 G3DSA:2.170.270.10|PF00856|SM00317|SSF82199 BKD09_RS20620 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001597|IPR015421|IPR015422|IPR015424|IPR026273 Aromatic amino acid beta-eliminating lyase/threonine aldolase|Low specificity L-threonine aldolase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0004793|GO:0006520|GO:0006567|GO:0016829 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01212|PIRSF038940|SSF53383 BKD09_RS20625 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS20630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR008995|IPR013611|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0016887|GO:0043190 G3DSA:3.40.50.300|PF00005|PF08402|PS00211|SM00382|SSF50331|SSF52540 BKD09_RS20635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR026045 Ferric binding protein G3DSA:3.40.190.10|PF13343|PIRSF002825|SSF53850 BKD09_RS20640 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000192|IPR015421|IPR015422|IPR015424|IPR020578|IPR024169 Aminotransferase class V domain|Aminotransferase class-V, pyridoxal-phosphate binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|PIRSF000524|PS00595|SSF53383 BKD09_RS20645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000573|IPR011827|IPR015928 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain|Aconitase/3-isopropylmalate dehydratase, swivel|Hydrolyase LeuD/HacB/DmdB GO:0008152|GO:0016836 G3DSA:3.20.19.10|PF00694|SSF52016|TIGR02087 BKD09_RS20650 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001030|IPR006251|IPR011826|IPR015931|IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2|Homoaconitase/3-isopropylmalate dehydratase, large subunit|Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0008152|GO:0008652|GO:0009098|GO:0016836|GO:0051539 G3DSA:3.30.499.10|G3DSA:3.40.1060.10|PF00330|PR00415|SSF53732|TIGR01343|TIGR02086 BKD09_RS20655 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein G3DSA:3.50.30.40|PF03737|SSF89562 BKD09_RS20660 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005471|IPR011991|IPR029016 GAF domain-like|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF09339|SM00346|SSF46785|SSF55781 BKD09_RS20665 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005561|IPR008327|IPR011006|IPR011991 ANTAR domain|CheY-like superfamily|Signal transduction response regulator, antiterminator|Winged helix-turn-helix DNA-binding domain GO:0003723 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF03861|PIRSF036382|SM01012|SSF52172 BKD09_RS20670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028082 Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13433|SSF53822 BKD09_RS20675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR020556|IPR023631 Amidase signature domain|Amidase, conserved site G3DSA:3.90.1300.10|PF01425|PS00571|SSF75304 BKD09_RS20680 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004304 Acetamidase/Formamidase GO:0016811 G3DSA:2.60.120.580|G3DSA:3.10.28.20|PF03069|SSF141130 BKD09_RS20685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019968|IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I|Urea ABC transporter, substrate-binding protein G3DSA:3.40.50.2300|PF13458|SSF53822|TIGR03669 BKD09_RS20690 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS20695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS20700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|SM00382|SSF52540 BKD09_RS20705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|SM00382|SSF52540 BKD09_RS20710 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00081|SSF51735 BKD09_RS20715 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023631 Amidase signature domain G3DSA:3.90.1300.10|PF01425|SSF75304 BKD09_RS20720 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|SM00382|SSF52540 BKD09_RS20725 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS20730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025997|IPR028082 Periplasmic binding protein|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13407|SSF53822 BKD09_RS20735 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001034|IPR014036|IPR018356 DeoR C-terminal sensor domain|DeoR-type HTH domain|Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0005622|GO:0006355 G3DSA:3.40.50.1360|PF00455|PF08220|PS00894|SM00420|SM01134|SSF100950 BKD09_RS20740 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002915|IPR011343|IPR013785 Aldolase-type TIM barrel|DeoC/FbaB/ lacD aldolase|Deoxyribose-phosphate aldolase GO:0003824|GO:0004139|GO:0005737|GO:0009264|GO:0016829 G3DSA:3.20.20.70|PF01791|SM01133|SSF51569|TIGR00126 BKD09_RS20745 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011408|IPR015590|IPR016161|IPR016162|IPR016163|IPR029510 Aldehyde dehydrogenase|Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PIRSF036490|PS00687|SSF53720 BKD09_RS20750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007721|IPR023750 D-ribose pyranase RbsD/L-fucose mutarotase FucU|RbsD-like domain GO:0005996|GO:0016853|GO:0048029 G3DSA:3.40.1650.10|PF05025|SSF102546 BKD09_RS20755 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002139|IPR011611|IPR011877|IPR029056 Carbohydrate kinase PfkB|Ribokinase|Ribokinase-like|Ribokinase/fructokinase GO:0004747|GO:0006014 G3DSA:3.40.1190.20|MF_01987|PF00294|PR00990|SSF53613|TIGR02152 BKD09_RS20760 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS20765 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS20770 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.40.190.10|PF13416|SSF53850 BKD09_RS20775 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR008995|IPR012340|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:2.40.50.100|G3DSA:2.40.50.140|G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF50331|SSF52540 BKD09_RS20780 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF13560|SM00530|SSF47413 BKD09_RS20785 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001853|IPR012336 DSBA-like thioredoxin domain|Thioredoxin-like fold GO:0015035 G3DSA:3.40.30.10|PF01323|SSF52833 BKD09_RS20790 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016181 Acyl-CoA N-acyltransferase PF13480|SSF55729 BKD09_RS20795 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007272 Sulphur transport domain PF04143 BKD09_RS20800 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007272 Sulphur transport domain PF04143 BKD09_RS20820 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002372|IPR011047|IPR018391|IPR027295 Pyrrolo-quinoline quinone beta-propeller repeat|Pyrrolo-quinoline quinone repeat|Quinoprotein alcohol dehydrogenase-like domain|Quinoprotein alcohol dehydrogenase-like superfamily G3DSA:2.140.10.10|PF13360|SM00564|SSF50998 BKD09_RS20830 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010486 HNS-dependent expression A/B G3DSA:1.10.890.10|PF06411 BKD09_RS20835 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003736|IPR006683|IPR029069 HotDog domain|Phenylacetic acid degradation-related domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|SSF54637|TIGR00369 BKD09_RS20865 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021529 Protein of unknown function DUF2798 PF11391 BKD09_RS20895 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|SSF53448 BKD09_RS20915 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003593|IPR013765|IPR020584|IPR023400|IPR027417 AAA+ ATPase domain|DNA recombination and repair protein RecA|DNA recombination and repair protein RecA, C-terminal|DNA recombination/repair protein RecA, conserved site|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003697|GO:0005524|GO:0006259|GO:0006281|GO:0008094 G3DSA:3.30.250.10|G3DSA:3.40.50.300|MF_00268|PF00154|PR00142|PS00321|SM00382|SSF52540|SSF54752|TIGR02012 BKD09_RS20925 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003437|IPR015421|IPR015424|IPR020580 Glycine cleavage system P-protein, N-terminal|Glycine dehydrogenase (decarboxylating)|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824|GO:0004375|GO:0006544|GO:0006546|GO:0055114 G3DSA:3.40.640.10|MF_00711|PF02347|SSF53383|TIGR00461 BKD09_RS20930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002930|IPR003016|IPR011053|IPR017453 2-oxo acid dehydrogenase, lipoyl-binding site|Glycine cleavage system H-protein|Glycine cleavage system H-protein, subgroup|Single hybrid motif GO:0005960|GO:0019464 G3DSA:2.40.50.100|MF_00272|PF01597|PS00189|SSF51230|TIGR00527 BKD09_RS20935 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006222|IPR006223|IPR013977|IPR027266|IPR028896|IPR029043 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA|GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1|Glycine cleavage T-protein, C-terminal barrel domain|Glycine cleavage T-protein-like, N-terminal|Glycine cleavage T-protein/YgfZ, C-terminal domain|Glycine cleavage system T protein GO:0004047|GO:0005515|GO:0006546 G3DSA:2.40.30.110|G3DSA:3.30.1360.120|G3DSA:3.30.70.1400|PF01571|PF08669|PIRSF006487|SSF101790|SSF103025|TIGR00528 BKD09_RS20940 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002318|IPR003156|IPR009000|IPR012947|IPR018162|IPR018163|IPR018164|IPR023033 Alanine-tRNA ligase, class IIc|Alanine-tRNA ligase, class IIc, anti-codon-binding domain|Alanine-tRNA ligase, eukaryota/bacteria|Alanyl-tRNA synthetase, class IIc, N-terminal|DHHA1 domain|Threonyl/alanyl tRNA synthetase, SAD|Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain|Translation protein, beta-barrel domain GO:0000166|GO:0003676|GO:0004813|GO:0005524|GO:0005737|GO:0006419|GO:0016876|GO:0043039 G3DSA:3.30.930.10|MF_00036_B|PF01411|PF02272|PF07973|PR00980|SM00863|SSF101353|SSF50447|SSF55186|SSF55681|TIGR00344 BKD09_RS20945 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000595|IPR005821|IPR014710|IPR018488|IPR018490|IPR028325 Cyclic nucleotide-binding domain|Cyclic nucleotide-binding, conserved site|Cyclic nucleotide-binding-like|Ion transport domain|RmlC-like jelly roll fold|Voltage-gated potassium channel GO:0005216|GO:0005249|GO:0006811|GO:0006813|GO:0008076|GO:0016020|GO:0055085 G3DSA:1.10.287.70|G3DSA:2.60.120.10|PF00027|PF00520|PR00169|PS00888|SM00100|SSF51206|SSF81324 BKD09_RS20950 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021851 Protein of unknown function DUF3455 PF11937 BKD09_RS20955 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004790|IPR019818|IPR024084 Isocitrate dehydrogenase NADP-dependent|Isocitrate/isopropylmalate dehydrogenase, conserved site|Isopropylmalate dehydrogenase-like domain GO:0000287|GO:0004450|GO:0006102|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.718.10|PF00180|PIRSF000108|PS00470|SM01329|SSF53659|TIGR00127 BKD09_RS20960 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001537|IPR004384|IPR007569|IPR029026|IPR029028 Alpha/beta knot methyltransferases|Domain of unknown function DUF559|RNA methyltransferase TrmH, group 1|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 G3DSA:3.40.1280.10|PF00588|PF04480|SSF75217|TIGR00050 BKD09_RS20965 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13181|PF13371|PF13432|SM00028|SSF48452 BKD09_RS20970 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000160|IPR029787 GGDEF domain|Nucleotide cyclase G3DSA:3.30.70.270|PF00990|SM00267|SSF55073|TIGR00254 BKD09_RS20975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029069 HotDog domain G3DSA:3.10.129.10|SSF54637 BKD09_RS20980 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|SM00829|SSF50129|SSF51735 BKD09_RS20985 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009915 NnrU domain PF07298 BKD09_RS20990 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR005158|IPR011990|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Bacterial transcriptional activator domain|Tetratricopeptide-like helical domain GO:0005515 G3DSA:3.40.50.1820|PF00561|PF03704|SM01043|SSF48452|SSF53474 BKD09_RS20995 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003712|IPR008076|IPR010982 Cyanate hydratase|Cyanate lyase, C-terminal|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0008824|GO:0009439 G3DSA:1.10.260.40|G3DSA:3.30.1160.10|MF_00535|PF02560|PIRSF001263|PR01693|SM01116|SSF47413|SSF55234|TIGR00673 BKD09_RS21000 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009945 Protein of unknown function DUF1476 PF07345|PIRSF031780 BKD09_RS21005 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001636|IPR013816|IPR018236|IPR028923 ATP-grasp fold, subdomain 2|Phosphoribosylaminoimidazole-succinocarboxamide synthase|SAICAR synthetase, conserved site|SAICAR synthetase/ADE2, N-terminal GO:0004639|GO:0005524|GO:0006164 G3DSA:3.30.200.20|G3DSA:3.30.470.20|MF_00137|PF01259|PS01057|SSF56104|TIGR00081 BKD09_RS21010 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS G3DSA:3.30.1280.10|MF_01926|PD010362|PF02700|SSF82697|TIGR00302 BKD09_RS21015 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 G3DSA:1.20.58.340|G3DSA:3.30.460.20|PF01544|SSF143865|SSF144083 BKD09_RS21020 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010075|IPR029062 Class I glutamine amidotransferase-like|Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 G3DSA:3.40.50.880|MF_00421|PF13507|PIRSF001586|SM01211|SSF52317|TIGR01737 BKD09_RS21025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 BKD09_RS21030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011990|IPR014562 Tetratricopeptide-like helical domain|Uncharacterised conserved protein UCP030959, divergent TPR repeat-containing GO:0005515 G3DSA:1.25.40.10|PF13432|PIRSF030959|SSF48452 BKD09_RS21035 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 BKD09_RS21040 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006683|IPR029069 HotDog domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|SSF54637 BKD09_RS21045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010074|IPR010918|IPR016188 AIR synthase-related protein, C-terminal domain|Phosphoribosylformylglycinamidine subunit PurL|PurM-like, N-terminal domain GO:0004642|GO:0005737|GO:0006189 G3DSA:3.30.1330.10|G3DSA:3.90.650.10|MF_00420|PF00586|PF02769|PIRSF001587|SSF55326|SSF56042|TIGR01736 BKD09_RS21050 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002656 Acyltransferase 3 GO:0016747 PF01757 BKD09_RS21055 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009760 Protein of unknown function DUF1328 GO:0005886 MF_01361|PF07043|PIRSF036466 BKD09_RS21060 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR002410|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Peptidase S33 GO:0006508|GO:0008233 G3DSA:3.40.50.1820|PF12697|PR00793|SSF53474 BKD09_RS21065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007361 Domain of unknown function DUF427 PF04248 BKD09_RS21070 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002634 BolA protein G3DSA:3.30.300.90|PF01722|PIRSF003113|SSF82657 BKD09_RS21075 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010640 Low temperature requirement A PF06772 BKD09_RS21080 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR017804|IPR019257|IPR029063 Histidine-specific methyltransferase, SAM-dependent|Methyltransferase EgtD-like|S-adenosyl-L-methionine-dependent methyltransferase PF10017|PIRSF018005|SSF53335|TIGR03438 BKD09_RS21085 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005532|IPR016187|IPR017806|IPR024775 C-type lectin fold|DinB-like domain|Ergothioneine biosynthesis protein EgtB|Sulfatase-modifying factor enzyme GO:0052699 G3DSA:3.90.1580.10|PF03781|PF12867|SSF109854|SSF56436|TIGR03440 BKD09_RS21090 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002109|IPR004480|IPR012336|IPR014434 Glutaredoxin|Monothiol glutaredoxin|Monothiol glutaredoxin-related|Thioredoxin-like fold GO:0009055|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00462|PIRSF005894|SSF52833|TIGR00365 BKD09_RS21095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002589 Macro domain G3DSA:3.40.220.10|PF01661|SM00506|SSF52949 BKD09_RS21100 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001466|IPR012338 Beta-lactamase-related|Beta-lactamase/transpeptidase-like G3DSA:3.40.710.10|PF00144|SSF56601 BKD09_RS21105 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001466|IPR012338 Beta-lactamase-related|Beta-lactamase/transpeptidase-like G3DSA:3.40.710.10|PF00144|SSF56601 BKD09_RS21110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001597|IPR015421|IPR015422|IPR015424|IPR023603 Aromatic amino acid beta-eliminating lyase/threonine aldolase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Threonine aldolase GO:0003824|GO:0006520|GO:0016829 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01212|PIRSF017617|SSF53383 BKD09_RS21115 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001912|IPR002942|IPR005709|IPR018079 RNA-binding S4 domain|Ribosomal protein S4, bacterial-type|Ribosomal protein S4, conserved site|Ribosomal protein S4/S9, N-terminal GO:0003723|GO:0003735|GO:0005622|GO:0006412|GO:0015935|GO:0019843 G3DSA:1.10.1050.10|G3DSA:3.10.290.10|MF_01306_B|PF00163|PF01479|PS00632|SM00363|SM01390|SSF55174|TIGR01017 BKD09_RS21120 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023213 Chloramphenicol acetyltransferase-like domain G3DSA:3.30.559.10|SSF52777 BKD09_RS21125 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 BKD09_RS21130 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005000|IPR015813 HpcH/HpaI aldolase/citrate lyase domain|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 G3DSA:3.20.20.60|PF03328|SSF51621 BKD09_RS21135 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001920|IPR004391|IPR015942|IPR018187|IPR033134 Asp/Glu racemase|Asp/Glu racemase, active site 1|Asp/Glu racemase, active site 2|Asp/Glu/hydantoin racemase|Glutamate racemase GO:0006807|GO:0008152|GO:0008881|GO:0009252|GO:0016855|GO:0036361 G3DSA:3.40.50.1860|MF_00258|PF01177|PS00923|PS00924|SSF53681|TIGR00067 BKD09_RS21140 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011577|IPR016174 Cytochrome b561, bacterial/Ni-hydrogenase|Di-haem cytochrome, transmembrane GO:0009055|GO:0016020|GO:0016021|GO:0022904 PF01292|SSF81342 BKD09_RS21145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004045|IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF02798|SSF47616|SSF52833 BKD09_RS21150 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000595|IPR014710|IPR018490 Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF00027|SM00100|SSF51206 BKD09_RS21160 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801 BKD09_RS21175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006059|IPR019546 Solute-binding family 1|Twin-arginine translocation pathway, signal sequence, bacterial/archaeal GO:0005215|GO:0006810 G3DSA:3.40.190.10|PF01547|SSF53850|TIGR01409 BKD09_RS21180 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR003594|IPR003661|IPR004358|IPR007891 CHASE3|Histidine kinase-like ATPase, C-terminal domain|PAS domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF02518|PF05227|PF13426|PR00344|SM00091|SM00387|SM00388|SSF47384|SSF55785|SSF55874|TIGR00229 BKD09_RS21185 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002933|IPR011650|IPR017439 Amidohydrolase|Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PIRSF005962|SSF53187|SSF55031|TIGR01891 BKD09_RS21190 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000362|IPR004769|IPR008948|IPR019468|IPR020557|IPR022761|IPR024083 Adenylosuccinate lyase|Adenylosuccinate lyase C-terminal|Fumarase/histidase, N-terminal|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0004018|GO:0009152 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|PF00206|PF10397|PR00149|PS00163|SM00998|SSF48557|TIGR00928 BKD09_RS21195 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893|IPR023772 DNA-binding HTH domain, TetR-type|DNA-binding HTH domain, TetR-type, conserved site|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|PS01081|SSF46689|SSF48498 BKD09_RS21205 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|SM00849|SSF56281 BKD09_RS21215 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|SM00421|SM00448|SSF46894|SSF52172 BKD09_RS21220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003594|IPR003660|IPR011712 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0004871|GO:0007165|GO:0016021|GO:0046983 G3DSA:3.30.565.10|PF07730|SM00304|SM00387|SSF55874 BKD09_RS21225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PF01618 BKD09_RS21240 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011152|IPR024654|IPR029052 Calcineurin-like phosphoesterase domain, lpxH type|Metallo-dependent phosphatase-like|Phosphoesterase MJ0912 G3DSA:3.60.21.10|PF12850|PIRSF000883|SSF56300 BKD09_RS21245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000719|IPR006015|IPR006016|IPR011009|IPR014729 Protein kinase domain|Protein kinase-like domain|Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0004672|GO:0005524|GO:0006468|GO:0006950 G3DSA:1.10.510.10|G3DSA:3.30.200.20|G3DSA:3.40.50.620|PF00069|PF00582|PR01438|SSF52402|SSF56112 BKD09_RS21265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000056|IPR011060|IPR013785|IPR026019 Aldolase-type TIM barrel|Ribulose-phosphate 3-epimerase|Ribulose-phosphate 3-epimerase-like|Ribulose-phosphate binding barrel GO:0003824|GO:0004750|GO:0005975|GO:0006098|GO:0008152|GO:0016857 G3DSA:3.20.20.70|PF00834|PIRSF001461|PS01085|PS01086|SSF51366|TIGR01163 BKD09_RS21270 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002048|IPR011992|IPR018247 EF-Hand 1, calcium-binding site|EF-hand domain|EF-hand domain pair GO:0005509 G3DSA:1.10.238.10|PF13499|PS00018|SM00054|SSF47473 BKD09_RS21275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005321|IPR016117 ArgJ-like domain|Peptidase S58, DmpA G3DSA:3.60.70.12|PF03576|SSF56266 BKD09_RS21280 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR001610|IPR001789|IPR003594|IPR003661|IPR004358|IPR011006|IPR013655|IPR013656|IPR033424 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|Membrane-associated sensor domain|PAC motif|PAS domain|PAS fold-3|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0005515|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PF08447|PF08448|PF17158|PR00344|SM00086|SM00091|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55785|SSF55874|TIGR00229 BKD09_RS21285 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 BKD09_RS21290 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000709|IPR028081|IPR028082 Leu/Ile/Val-binding protein|Leucine-binding protein domain|Periplasmic binding protein-like I GO:0006865 G3DSA:3.40.50.2300|PF13458|PR00337|SSF53822 BKD09_RS21295 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS21300 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|PS00211|SM00382|SSF52540 BKD09_RS21305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851|IPR021807 ABC transporter, permease|High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal GO:0005215|GO:0006810|GO:0016020 PF02653|PF11862 BKD09_RS21310 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS21325 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003779|IPR029032 AhpD-like|Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 G3DSA:1.20.1290.10|PF02627|SSF69118 BKD09_RS21330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR026968|IPR029058 3-oxoadipate enol-lactonase 1/2|Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 GO:0042952|GO:0047570 G3DSA:3.40.50.1820|PF00561|PR00111|SSF53474|TIGR02427 BKD09_RS21335 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000362|IPR008948|IPR012789|IPR019468|IPR020557|IPR022761|IPR024083 3-carboxy-cis,cis-muconate cycloisomerase|Adenylosuccinate lyase C-terminal|Fumarase/histidase, N-terminal|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0019619|GO:0047472 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|PF00206|PF10397|PR00145|PR00149|PS00163|SM00998|SSF48557|TIGR02426 BKD09_RS21340 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010419|IPR023393 Carbon monoxide dehydrogenase subunit G|START-like domain G3DSA:3.30.530.20|PF06240|SSF55961 BKD09_RS21345 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001041|IPR002888|IPR012675 2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|[2Fe-2S]-binding GO:0009055|GO:0016491|GO:0046872|GO:0051536|GO:0055114 G3DSA:1.10.150.120|G3DSA:3.10.20.30|PF00111|PF01799|SSF47741|SSF54292 BKD09_RS21350 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002346|IPR005107|IPR016166|IPR016167|IPR016169 CO dehydrogenase flavoprotein, C-terminal|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|Molybdopterin dehydrogenase, FAD-binding GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.30.390.50|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF00941|PF03450|SM01092|SSF55447|SSF56176 BKD09_RS21355 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003593|IPR011704|IPR027417 AAA+ ATPase domain|ATPase, dynein-related, AAA domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF07728|SM00382|SSF52540 BKD09_RS21360 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002035|IPR008912|IPR011195 Uncharacterised conserved protein UCP010256|Uncharacterised protein family CoxE-like|von Willebrand factor, type A G3DSA:3.40.50.410|PF05762|PIRSF010256|SM00327|SSF53300 BKD09_RS21365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003777 XdhC- CoxI PF02625 BKD09_RS21370 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016040|IPR027051 NAD(P)-binding domain|XdhC Rossmann domain G3DSA:3.40.50.720|PF13478 BKD09_RS21375 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001453|IPR012184|IPR025877|IPR029044 Bifunctional molybdopterin binding protein /nucleotidyl transferase, putative|MoaB/Mog domain|MobA-like NTP transferase|Nucleotide-diphospho-sugar transferases G3DSA:3.40.980.10|G3DSA:3.90.105.10|G3DSA:3.90.550.10|PF12804|PIRSF036626|SM00852|SSF53218|SSF53448 BKD09_RS21380 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025240 Domain of unknown function DUF4189 PF13827 BKD09_RS21385 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006913|IPR011057 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V|Mss4-like GO:0008152|GO:0016846 G3DSA:3.90.1590.10|PF04828|SSF51316 BKD09_RS21390 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013538|IPR023393 Activator of Hsp90 ATPase homologue 1-like|START-like domain GO:0006950 G3DSA:3.30.530.20|PF08327|SSF55961 BKD09_RS21395 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001845|IPR011991 HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12840|PR00778|SM00418|SSF46785 BKD09_RS21400 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PF16859|SSF46689|SSF48498 BKD09_RS21405 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF13437|PF13533|SSF111369|TIGR01730 BKD09_RS21410 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS21415 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic PF12698 BKD09_RS21420 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|Nucleotide cyclase GO:0009190|GO:0016849|GO:0035556 G3DSA:3.30.70.1230|PF00211|SM00044|SSF55073 BKD09_RS21430 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR011663|IPR011991|IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain|Transcription regulator HTH, GntR|UbiC transcription regulator-associated|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.1410.10|PF00392|PF07702|SM00345|SM00866|SSF46785|SSF64288 BKD09_RS21435 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005829|IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain|Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PS00216|PS00217|SSF103473 BKD09_RS21440 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006680|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase GO:0016787 G3DSA:3.20.20.140|PF04909|SSF51556 BKD09_RS21445 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 G3DSA:3.10.310.10|PF02567|PIRSF016184|SSF54506|TIGR00654 BKD09_RS21450 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007438|IPR014519 Protein of unknown function DUF488|Uncharacterised conserved protein UCP024492 PF04343|PIRSF024492 BKD09_RS21455 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002763 Protein of unknown function DUF72 G3DSA:3.20.20.410|PF01904|SSF117396 BKD09_RS21470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001173|IPR007267|IPR029044 Glycosyltransferase 2-like|GtrA-like protein|Nucleotide-diphospho-sugar transferases GO:0000271|GO:0006810|GO:0016021 G3DSA:3.90.550.10|PF00535|PF04138|SSF53448 BKD09_RS21475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic PF13231 BKD09_RS21480 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR007890|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|CHASE2|Nucleotide cyclase GO:0009190|GO:0016849|GO:0035556 G3DSA:3.30.70.1230|PF00211|PF05226|SM00044|SM01080|SSF55073 BKD09_RS21485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006860|IPR018247 EF-Hand 1, calcium-binding site|FecR protein PF04773|PS00018 BKD09_RS21490 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021225 Protein of unknown function DUF2778 PF10908 BKD09_RS21495 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|SSF51735 BKD09_RS21500 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000281|IPR001347|IPR009057|IPR011991 Helix-turn-helix protein RpiR|Homeodomain-like|Sugar isomerase (SIS)|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0005975|GO:0006355|GO:0030246 G3DSA:1.10.10.10|G3DSA:3.40.50.10490|PF01380|PF01418|SSF46689|SSF53697 BKD09_RS21505 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS21510 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS21515 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS21520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS21525 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS21530 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.1140.10|PF00005|SM00382|SSF52540 BKD09_RS21535 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015590|IPR016161|IPR016162|IPR016163 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|SSF53720 BKD09_RS21540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013783|IPR029030 Caspase-like domain|Immunoglobulin-like fold G3DSA:2.60.40.10|G3DSA:3.40.50.1460|PF00656|SSF52129 BKD09_RS21545 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004045|IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF13417|SSF47616|SSF52833 BKD09_RS21550 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|PF00857|SSF52499 BKD09_RS21555 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 BKD09_RS21560 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000305|IPR027299 GIY-YIG domain|GIY-YIG nuclease superfamily G3DSA:3.40.1440.10|PF01541|SM00465|SSF82771 BKD09_RS21575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001107|IPR001972 Band 7 domain|Stomatin family GO:0016020 PF01145|PR00721|SM00244|SSF117892 BKD09_RS21580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000223|IPR015927|IPR019756|IPR019757|IPR019758|IPR019759|IPR028360 Peptidase S24/S26, beta-ribbon domain|Peptidase S24/S26A/S26B|Peptidase S24/S26A/S26B/S26C|Peptidase S26A, signal peptidase I|Peptidase S26A, signal peptidase I, conserved site|Peptidase S26A, signal peptidase I, lysine active site|Peptidase S26A, signal peptidase I, serine active site GO:0006508|GO:0008236|GO:0016020|GO:0016021 G3DSA:2.10.109.10|PF00717|PR00727|PS00501|PS00760|PS00761|SSF51306|TIGR02227 BKD09_RS21585 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001844|IPR002423|IPR018370|IPR027409|IPR027413 Chaperonin Cpn60|Chaperonin Cpn60, conserved site|Chaperonin Cpn60/TCP-1 family|GroEL-like apical domain|GroEL-like equatorial domain GO:0005524|GO:0005737|GO:0006457|GO:0042026 G3DSA:1.10.560.10|G3DSA:3.50.7.10|MF_00600|PF00118|PR00298|PS00296|SSF48592|SSF52029|SSF54849|TIGR02348 BKD09_RS21590 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011032|IPR018369|IPR020818 Chaperonin GroES, conserved site|GroES chaperonin family|GroES-like GO:0005524|GO:0005737|GO:0006457 G3DSA:2.30.33.40|MF_00580|PF00166|PR00297|PS00681|SM00883|SSF50129 BKD09_RS21595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009354 Usg-like PF06233 BKD09_RS21600 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 BKD09_RS21605 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002668|IPR011657 Concentrative nucleoside transporter C-terminal domain|Concentrative nucleoside transporter N-terminal domain PF01773|PF07662 BKD09_RS21610 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010290|IPR020846 Major facilitator superfamily domain|Transmembrane secretion effector G3DSA:1.20.1250.20|PF05977|SSF103473 BKD09_RS21620 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF00106|PR00080|PR00081|SSF51735 BKD09_RS21625 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016545|IPR029055 Nucleophile aminohydrolases, N-terminal|Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 G3DSA:3.60.20.10|PIRSF009120|SSF56235 BKD09_RS21630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003779|IPR004675|IPR029032 AhpD-like|Alkylhydroperoxidase AhpD core|Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 G3DSA:1.20.1290.10|PF02627|SSF69118|TIGR00778 BKD09_RS21635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009075|IPR009100|IPR013107|IPR013786 Acyl-CoA dehydrogenase, C-terminal domain|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF02771|PF08028|PIRSF016578|SSF47203|SSF56645 BKD09_RS21640 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002931|IPR013589 Bacterial transglutaminase-like, N-terminal|Transglutaminase-like G3DSA:3.90.260.10|PF01841|PF08379|SM00460|SSF54001 BKD09_RS21645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007296 Domain of unknown function DUF403 PF04168 BKD09_RS21650 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016450|IPR025841 Circularly permuted ATP-grasp type 2|Uncharacterised conserved protein UCP005522 PF14403|PIRSF005522|SSF56059 BKD09_RS21655 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001453 MoaB/Mog domain G3DSA:3.40.980.10|PF00994|SM00852|SSF53218 BKD09_RS21660 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000836|IPR023747|IPR029057 Phosphoribosyltransferase domain|Phosphoribosyltransferase-like|Xanthine-guanine phosphoribosyltransferase GO:0000310|GO:0009116 G3DSA:3.40.50.2020|MF_01903|PF00156|SSF53271 BKD09_RS21665 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 G3DSA:3.40.10.10 BKD09_RS21675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002629|IPR016456 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal|Predicted cobalamin-independent methionine synthase, catalytic subunit GO:0003871|GO:0008270|GO:0009086 G3DSA:3.20.20.210|PF01717|PIRSF005632|SSF51726 BKD09_RS21680 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004045|IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF02798|SSF47616|SSF52833 BKD09_RS21685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001853|IPR012336|IPR014440 DSBA-like thioredoxin domain|HCCA isomerase/glutathione S-transferase kappa|Thioredoxin-like fold GO:0015035 G3DSA:3.40.30.10|PF01323|PIRSF006386|SSF52833 BKD09_RS21690 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|SM00829|SSF50129|SSF51735 BKD09_RS21695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001753|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|SSF52096 BKD09_RS21700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023631 Amidase signature domain G3DSA:3.90.1300.10|PF01425|SSF75304 BKD09_RS21705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002933|IPR011650|IPR017439 Amidohydrolase|Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PIRSF005962|SSF53187|SSF55031|TIGR01891 BKD09_RS21710 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009197|IPR010799|IPR015995 Microcystin LR degradation protein MlrC|Microcystin LR degradation protein MlrC, C-terminal|Microcystin LR degradation protein MlrC, N-terminal PF07171|PF07364|PIRSF012702 BKD09_RS21715 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540 BKD09_RS21720 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS21725 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS21730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006076|IPR016040|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain|NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.30.9.10|G3DSA:3.40.50.720|PF01266|SSF51905|SSF54373 BKD09_RS21735 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001261|IPR002933|IPR011650|IPR017150 ArgE/DapE/ACY1/CPG2/YscS, conserved site|Peptidase M20|Peptidase M20, dimerisation domain|Peptidase M20, glutamate carboxypeptidase GO:0006508|GO:0008152|GO:0008237|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PIRSF037238|PS00758|SSF53187|SSF55031 BKD09_RS21740 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000914|IPR023765|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain|Solute-binding protein family 5, conserved site GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PS01040|SSF53850 BKD09_RS21745 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic PF13231 BKD09_RS21750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004812|IPR005829|IPR011701|IPR020846 Drug resistance transporter Bcr/CmlA subfamily|Major facilitator superfamily|Major facilitator superfamily domain|Sugar transporter, conserved site GO:0005215|GO:0006810|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PS00216|SSF103473|TIGR00710 BKD09_RS21755 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|SSF46689|SSF48498 BKD09_RS21760 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001753|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|SSF52096 BKD09_RS21780 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002938|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain GO:0016491|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF01494|PR00420|SSF51905|SSF54373 BKD09_RS21785 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019401 Zinc finger, CHCC-type G3DSA:2.60.260.40|PF10276 BKD09_RS21795 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF00561|SSF53474 BKD09_RS21805 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001451|IPR005881|IPR010493|IPR011004|IPR018357 Hexapeptide repeat|Hexapeptide transferase, conserved site|Serine O-acetyltransferase|Serine acetyltransferase, N-terminal|Trimeric LpxA-like GO:0005737|GO:0006535|GO:0009001|GO:0016740 G3DSA:1.10.3130.10|G3DSA:2.160.10.10|PF00132|PF06426|PS00101|SM00971|SSF51161|TIGR01172 BKD09_RS21810 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021473 Protein of unknown function DUF3126 PF11324 BKD09_RS21815 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003736|IPR006683|IPR029069 HotDog domain|Phenylacetic acid degradation-related domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|SSF54637|TIGR00369 BKD09_RS21830 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001451|IPR011004 Hexapeptide repeat|Trimeric LpxA-like G3DSA:2.160.10.10|PF00132|SSF51161 BKD09_RS21840 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:1.20.1170.10 BKD09_RS21845 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 PF01177 BKD09_RS21850 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS21855 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS21860 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.40.190.10|PF13416|SSF53850 BKD09_RS21865 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR008995|IPR013611|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0016887|GO:0043190 G3DSA:3.40.50.300|PF00005|PF08402|PS00211|SM00382|SSF50331|SSF52540 BKD09_RS21870 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|SM00345|SM00895|SSF46785|SSF48008 BKD09_RS21880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|SSF51338|SSF51556 BKD09_RS21885 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007899|IPR023577|IPR033469 CHAD domain|CYTH domain|CYTH-like domain G3DSA:2.40.320.10|PF01928|PF05235|SM00880|SM01118|SSF55154 BKD09_RS21890 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010319 Transglutaminase-like cysteine peptidase, predicted PF06035 BKD09_RS21895 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009875 PilZ domain GO:0035438 PF07238|SSF141371 BKD09_RS21900 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS21905 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010290|IPR020846 Major facilitator superfamily domain|Transmembrane secretion effector G3DSA:1.20.1250.20|PF05977|SSF103473 BKD09_RS21910 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF00561|SSF53474 BKD09_RS21915 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 BKD09_RS21920 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004176 Clp, N-terminal GO:0019538 G3DSA:1.10.1780.10|PF02861|SSF81923 BKD09_RS21925 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011032|IPR013149|IPR013154|IPR016040 Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|SSF50129|SSF51735 BKD09_RS21935 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|SSF54593 BKD09_RS21945 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 BKD09_RS21950 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011152|IPR024654|IPR029052 Calcineurin-like phosphoesterase domain, lpxH type|Metallo-dependent phosphatase-like|Phosphoesterase MJ0912 G3DSA:3.60.21.10|PF12850|PIRSF000883|SSF56300 BKD09_RS21960 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000629|IPR001650|IPR005580|IPR011545|IPR014001|IPR027417 ATP-dependent RNA helicase DEAD-box, conserved site|DEAD/DEAH box helicase domain|DbpA, RNA-binding domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0005524 G3DSA:3.40.50.300|PF00270|PF00271|PF03880|PS00039|SM00487|SM00490|SSF52540 BKD09_RS21970 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 BKD09_RS21975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005297|IPR014558 Lipoprotein repeat|Uncharacterised conserved lipoprotein PF03640|PIRSF029720 BKD09_RS21980 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010234|IPR018968 Phasin|Phasin, subfamily 2 PF09361|TIGR01985 BKD09_RS21985 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|SM00100|SSF46785|SSF51206 BKD09_RS21990 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 BKD09_RS21995 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009922 Protein of unknown function DUF1457 PF07310|PIRSF031878 BKD09_RS22000 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 G3DSA:1.20.1540.10|PF01694|SSF144091 BKD09_RS22005 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000644 CBS domain G3DSA:3.10.580.10|PF00571|SM00116|SSF54631 BKD09_RS22010 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002641|IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase|Patatin/Phospholipase A2-related GO:0006629|GO:0008152 G3DSA:3.40.1090.10|PF01734|SSF52151 BKD09_RS22020 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS22025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023210 NADP-dependent oxidoreductase domain G3DSA:3.20.20.100|PF00248|SSF51430 BKD09_RS22035 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002364|IPR011032|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain|Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF08240|PF13602|PS01162|SM00829|SSF50129|SSF51735 BKD09_RS22040 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS22045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009959|IPR032710 NTF2-like domain|Polyketide cyclase SnoaL-like domain G3DSA:3.10.450.50|PF12680|SSF54427 BKD09_RS22050 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010721 Protein of unknown function DUF1295 PF06966 BKD09_RS22060 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR001867|IPR005158|IPR011990|IPR011991|IPR016032|IPR022742|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Bacterial transcriptional activator domain|OmpR/PhoB-type DNA-binding domain|Serine aminopeptidase, S33|Signal transduction response regulator, C-terminal effector|Tetratricopeptide-like helical domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0005515|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.25.40.10|G3DSA:3.40.50.1820|PF00486|PF03704|PF12146|PR00111|SM01043|SSF46894|SSF48452|SSF53474 BKD09_RS22065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR000160|IPR001633|IPR029787 EAL domain|GGDEF domain|Nucleotide cyclase|PAS domain G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00563|PF00990|PF13188|SM00052|SM00091|SM00267|SSF141868|SSF55073|SSF55785|TIGR00229|TIGR00254 BKD09_RS22070 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001466|IPR012338 Beta-lactamase-related|Beta-lactamase/transpeptidase-like G3DSA:3.40.710.10|PF00144|SSF56601 BKD09_RS22075 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000415|IPR026021|IPR029479 Nitroreductase|Nitroreductase-like|Putative NAD(P)H nitroreductase YdjA-like GO:0016491 G3DSA:3.40.109.10|PF00881|PIRSF000232|SSF55469 BKD09_RS22080 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002314|IPR002320|IPR004095|IPR004154|IPR012675|IPR012676|IPR012947|IPR018163 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Anticodon-binding|Beta-grasp domain|TGS|TGS-like|Threonine-tRNA ligase, class IIa|Threonyl/alanyl tRNA synthetase, SAD|Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166|GO:0004812|GO:0004829|GO:0005524|GO:0005737|GO:0006418|GO:0006435|GO:0016876|GO:0043039 G3DSA:3.10.20.30|G3DSA:3.30.54.20|G3DSA:3.30.930.10|G3DSA:3.30.980.10|G3DSA:3.40.50.800|MF_00184|PF00587|PF02824|PF03129|PF07973|PR01047|SM00863|SSF52954|SSF55186|SSF55681|SSF81271|TIGR00418 BKD09_RS22085 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS22095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032417 T3SS negative regulator GrlR PF16518 BKD09_RS22100 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029058 Alpha/Beta hydrolase fold G3DSA:3.40.50.1820|SSF53474 BKD09_RS22105 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PF13520|PIRSF006060 BKD09_RS22120 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002696 Putative membrane protein insertion efficiency factor MF_00386|PD004225|PF01809|SM01234|TIGR00278 BKD09_RS22125 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029045 ClpP/crotonase-like domain G3DSA:3.90.226.10|SSF52096 BKD09_RS22130 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 G3DSA:3.90.1010.10|PF01592|SSF82649 BKD09_RS22135 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001474|IPR018234|IPR020602 GTP cyclohydrolase I|GTP cyclohydrolase I domain|GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 G3DSA:1.10.286.10|G3DSA:3.30.1130.10|MF_00223|PF01227|PS00859|SSF55620|TIGR00063 BKD09_RS22140 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002496|IPR026660 Phosphoribosyl-AMP cyclohydrolase|Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 MF_01021|PD002610|PF01502|SSF141734 BKD09_RS22145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023346 Lysozyme-like domain G3DSA:1.10.530.10|SSF53955 BKD09_RS22150 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014598|IPR019285 Protein of unknown function DUF2336|Uncharacterised conserved protein UCP035865 PF10098|PIRSF035865 BKD09_RS22155 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 G3DSA:1.20.120.160|PF01627|SSF47226 BKD09_RS22160 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 BKD09_RS22165 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021354 Protein of unknown function DUF2975 PF11188 BKD09_RS22170 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF13443|SM00530|SSF47413 BKD09_RS22180 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002504|IPR016064|IPR017437|IPR017438 ATP-NAD kinase, PpnK-type, all-beta|Inorganic polyphosphate/ATP-NAD kinase, domain 1|NAD kinase|NAD kinase/diacylglycerol kinase-like domain GO:0003951|GO:0006741|GO:0008152|GO:0019674 G3DSA:2.60.200.30|G3DSA:3.40.50.10330|MF_00361|PF01513|SSF111331 BKD09_RS22185 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001563|IPR029058 Alpha/Beta hydrolase fold|Peptidase S10, serine carboxypeptidase GO:0004185|GO:0006508 G3DSA:3.40.50.1820|PF00450|SSF53474 BKD09_RS22190 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001466|IPR012338 Beta-lactamase-related|Beta-lactamase/transpeptidase-like G3DSA:3.40.710.10|PF00144|SSF56601 BKD09_RS22195 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF14559|SSF48452 BKD09_RS22210 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 BKD09_RS22240 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003660|IPR004089|IPR004090 Chemotaxis methyl-accepting receptor|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PR00260|SM00283|SM00304|SSF58104 BKD09_RS22245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002925|IPR029058 Alpha/Beta hydrolase fold|Dienelactone hydrolase GO:0016787 G3DSA:3.40.50.1820|PF01738|SSF53474 BKD09_RS22250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13649|SSF53335 BKD09_RS22255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002372|IPR009056|IPR011047|IPR018391|IPR027295 Cytochrome c-like domain|Pyrrolo-quinoline quinone beta-propeller repeat|Pyrrolo-quinoline quinone repeat|Quinoprotein alcohol dehydrogenase-like domain|Quinoprotein alcohol dehydrogenase-like superfamily GO:0009055|GO:0020037 G3DSA:1.10.760.10|G3DSA:2.140.10.10|PF13360|PF13442|SM00564|SSF46626|SSF50998 BKD09_RS22260 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006913|IPR011057 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V|Mss4-like GO:0008152|GO:0016846 G3DSA:3.90.1590.10|PF04828|SSF51316 BKD09_RS22270 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005496|IPR022301 Integral membrane protein TerC|Integral membrane protein YjbE GO:0016021 PF03741|TIGR03717 BKD09_RS22305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001537|IPR004441|IPR013123|IPR029026|IPR029028|IPR029064 50S ribosomal protein L30e-like|Alpha/beta knot methyltransferases|RNA 2-O ribose methyltransferase, substrate binding|RNA methyltransferase TrmH family|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008168|GO:0008173 G3DSA:3.30.1330.30|G3DSA:3.40.1280.10|PF00588|PF08032|SM00967|SSF55315|SSF75217|TIGR00186 BKD09_RS22315 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011251|IPR022290 Conserved hypothetical protein CHP03858, luciferase-like monooxygenase, putative|Luciferase-like domain GO:0016705|GO:0055114 G3DSA:3.20.20.30|PF00296|SSF51679|TIGR03858 BKD09_RS22320 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS22325 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005828|IPR005829|IPR020846 Major facilitator superfamily domain|Major facilitator, sugar transporter-like|Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1250.20|PF00083|PS00217|SSF103473 BKD09_RS22330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029016 GAF domain-like G3DSA:3.30.450.40|SSF55781 BKD09_RS22335 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|SSF51338|SSF51556 BKD09_RS22345 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014016|IPR014017|IPR027417 P-loop containing nucleoside triphosphate hydrolase|UvrD-like DNA helicase, C-terminal|UvrD-like Helicase, ATP-binding domain GO:0005524|GO:0016787 G3DSA:1.10.486.10|G3DSA:3.40.50.300|PF00580|PF13361|SSF52540 BKD09_RS22350 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010617 Endosomal/lysomomal potassium channel TMEM175 GO:0005267 PF06736 BKD09_RS22355 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005545|IPR011008 Dimeric alpha-beta barrel|YCII-related G3DSA:3.30.70.1060|PF03795|SSF54909 BKD09_RS22370 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PF00497|SSF53850 BKD09_RS22375 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR001789|IPR003594|IPR003661|IPR004358|IPR011006|IPR013656|IPR033414 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold-4|Periplasmic sensor domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PF08448|PF17149|PR00344|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55785|SSF55874|TIGR00229 BKD09_RS22400 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|SSF82693|SSF82714|SSF82866 BKD09_RS22410 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1320|G3DSA:3.30.70.1430|PF00873|PR00702|SSF82693|SSF82714|SSF82866 BKD09_RS22420 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013783 Immunoglobulin-like fold G3DSA:2.60.40.10 BKD09_RS22425 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025711 PepSY domain PF03413 BKD09_RS22435 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002477 Peptidoglycan binding-like G3DSA:1.10.101.10|PF01471|SSF47090 BKD09_RS22440 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR003838|IPR017871|IPR025857|IPR027417 AAA+ ATPase domain|ABC transporter permease protein domain|ABC transporter, conserved site|ABC transporter-like|MacB-like periplasmic core domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016020|GO:0016887 G3DSA:3.40.50.300|PF00005|PF02687|PF12704|PS00211|SM00382|SSF52540 BKD09_RS22445 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057 Homeodomain-like GO:0003677 G3DSA:1.10.10.60|SSF46689 BKD09_RS22450 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein PF04955 BKD09_RS22455 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein PF04955|PIRSF016919 BKD09_RS22460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032809 Putative HupE/UreJ protein PF13795 BKD09_RS22465 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 G3DSA:3.10.50.40|PF13145 BKD09_RS22480 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012668 Conserved hypothetical protein CHP02466 G3DSA:2.60.120.620|PF13759|SSF51197 BKD09_RS22485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|SSF53335 BKD09_RS22490 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|SSF56935 BKD09_RS22505 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|SSF88659|SSF88946|TIGR02937 BKD09_RS22510 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002035|IPR021908|IPR022156 Protein of unknown function DUF3520|Uncharacterised protein YfbK, N-terminal|von Willebrand factor, type A G3DSA:3.40.50.410|PF00092|PF12034|PF12450|SM00327|SSF53300 BKD09_RS22520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|SSF88659|SSF88946|TIGR02937 BKD09_RS22530 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011577|IPR016174 Cytochrome b561, bacterial/Ni-hydrogenase|Di-haem cytochrome, transmembrane GO:0009055|GO:0016020|GO:0016021|GO:0022904 PF01292|SSF81342 BKD09_RS22550 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009495 Protein of unknown function DUF1109 PF06532 BKD09_RS22555 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016040 NAD(P)-binding domain G3DSA:3.90.25.10|SSF51735 BKD09_RS22565 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005829|IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain|Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PS00216|SSF103473 BKD09_RS22570 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008567|IPR013785 3-keto-5-aminohexanoate cleavage enzyme|Aldolase-type TIM barrel GO:0003824|GO:0016740|GO:0019475 G3DSA:3.20.20.70|PF05853 BKD09_RS22575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS22580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 BKD09_RS22585 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|SSF89796 BKD09_RS22595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006175|IPR013813 Endoribonuclease L-PSP/chorismate mutase-like|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|SSF55298 BKD09_RS22600 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893|IPR023772 DNA-binding HTH domain, TetR-type|DNA-binding HTH domain, TetR-type, conserved site|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|PS01081|SSF46689|SSF48498 BKD09_RS22605 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|SSF47203|SSF56645 BKD09_RS22610 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002575|IPR011009 Aminoglycoside phosphotransferase|Protein kinase-like domain G3DSA:3.90.1200.10|PF01636|SSF56112 BKD09_RS22615 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PF01810|PIRSF006324 BKD09_RS22625 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001261|IPR002933|IPR010169|IPR011650 Acetylornithine deacetylase ArgE|ArgE/DapE/ACY1/CPG2/YscS, conserved site|Peptidase M20|Peptidase M20, dimerisation domain GO:0005737|GO:0006508|GO:0006526|GO:0008152|GO:0008237|GO:0008777|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PS00759|SSF53187|SSF55031|TIGR01892 BKD09_RS22630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|SSF46689 BKD09_RS22635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013901 Protein of unknown function DUF1772 PF08592 BKD09_RS22645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SM00822|SSF51735 BKD09_RS22650 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013078|IPR029033 Histidine phosphatase superfamily|Histidine phosphatase superfamily, clade-1 G3DSA:3.40.50.1240|PF00300|SM00855|SSF53254 BKD09_RS22655 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SSF51735 BKD09_RS22660 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001466|IPR012338 Beta-lactamase-related|Beta-lactamase/transpeptidase-like G3DSA:3.40.710.10|PF00144|SSF56601 BKD09_RS22670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001901|IPR005807|IPR022943 Preprotein translocase subunit SecE|Protein translocase complex, SecE/Sec61-gamma subunit|SecE subunit of protein translocation complex GO:0006605|GO:0006886|GO:0009306|GO:0015450|GO:0016020|GO:0016021 G3DSA:1.20.5.1030|MF_00422|PF00584|PR01650|TIGR00964 BKD09_RS22675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001062|IPR005824|IPR006645|IPR008991|IPR014722|IPR015869 KOW|NusG, N-terminal|Ribosomal protein L2 domain 2|Transcription antitermination protein, NusG|Transcription antitermination protein, NusG, bacteria, conserved site|Translation protein SH3-like domain GO:0006355|GO:0032784 G3DSA:2.30.30.30|G3DSA:3.30.70.940|MF_00948|PF00467|PF02357|PR00338|PS01014|SM00738|SM00739|SSF50104|SSF82679|TIGR00922 BKD09_RS22680 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000911|IPR006519|IPR020783|IPR020784|IPR020785 Ribosomal protein L11, C-terminal|Ribosomal protein L11, N-terminal|Ribosomal protein L11, bacterial-type|Ribosomal protein L11, conserved site|Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 G3DSA:1.10.10.250|G3DSA:3.30.1550.10|MF_00736|PD001367|PF00298|PF03946|PS00359|SM00649|SSF46906|SSF54747|TIGR01632 BKD09_RS22685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002143|IPR005878|IPR016094|IPR016095|IPR023673|IPR023674|IPR028364 Ribosomal protein L1|Ribosomal protein L1, 2-layer alpha/beta-sandwich|Ribosomal protein L1, 3-layer alpha/beta-sandwich|Ribosomal protein L1, bacterial-type|Ribosomal protein L1, conserved site|Ribosomal protein L1-like|Ribosomal protein L1/ribosomal biogenesis protein GO:0003723|GO:0003735|GO:0006412|GO:0015934 G3DSA:3.30.190.20|G3DSA:3.40.50.790|MF_01318_B|PF00687|PIRSF002155|PS01199|SSF56808|TIGR01169 BKD09_RS22690 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006139|IPR006140|IPR016040 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF00389|PF02826|SSF51735|SSF52283 BKD09_RS22695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001790|IPR022973 Ribosomal protein L10|Ribosomal protein L10P GO:0005622|GO:0042254 MF_00362|PD968187|PF00466|SSF160369 BKD09_RS22700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000206|IPR008932|IPR013823|IPR014719 Ribosomal protein L7/L12|Ribosomal protein L7/L12, C-terminal|Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like|Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.20.5.710|G3DSA:3.30.1390.10|MF_00368|PD001326|PF00542|PF16320|SSF48300|SSF54736|TIGR00855 BKD09_RS22705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007120|IPR007121|IPR007641|IPR007642|IPR007644|IPR007645|IPR010243|IPR014724|IPR019462 DNA-directed RNA polymerase beta subunit, bacterial-type|DNA-directed RNA polymerase, beta subunit, external 1 domain|DNA-directed RNA polymerase, subunit 2, domain 6|RNA polymerase Rpb2, OB-fold|RNA polymerase Rpb2, domain 2|RNA polymerase Rpb2, domain 3|RNA polymerase Rpb2, domain 7|RNA polymerase, beta subunit, conserved site|RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 G3DSA:2.30.150.10|G3DSA:2.40.270.10|G3DSA:2.40.50.100|G3DSA:2.40.50.150|G3DSA:3.90.1100.10|G3DSA:3.90.1110.10|MF_01321|PF00562|PF04560|PF04561|PF04563|PF04565|PF10385|PS01166|SSF64484|TIGR02013 BKD09_RS22710 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000722|IPR006592|IPR007066|IPR007080|IPR007081|IPR007083|IPR012754 DNA-directed RNA polymerase, subunit beta-prime|RNA polymerase Rpb1, domain 1|RNA polymerase Rpb1, domain 3|RNA polymerase Rpb1, domain 4|RNA polymerase Rpb1, domain 5|RNA polymerase, N-terminal|RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 G3DSA:2.40.40.20|G3DSA:2.40.50.100|MF_01322|MF_01323|PF00623|PF04983|PF04997|PF04998|PF05000|SM00663|SSF64484|TIGR02386 BKD09_RS22715 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002937|IPR013216|IPR023753|IPR029063 Amine oxidase|FAD/NAD(P)-binding domain|Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168|GO:0016491|GO:0055114 G3DSA:3.40.50.150|G3DSA:3.50.50.60|G3DSA:3.90.660.10|PF01593|PF08241|SSF51905|SSF53335|SSF54373 BKD09_RS22720 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|SM00382|SSF52540|SSF90123 BKD09_RS22725 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002938|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain GO:0016491|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF01494|PR00420|SSF51905 BKD09_RS22730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005679|IPR006032|IPR012340 Nucleic acid-binding, OB-fold|Ribosomal protein S12, bacterial-type|Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015935 G3DSA:2.40.50.140|MF_00403_B|PF00164|PIRSF002133|PR01034|PS00055|SSF50249|TIGR00981 BKD09_RS22735 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000235|IPR005717|IPR020606|IPR023798 Ribosomal protein S5/S7|Ribosomal protein S7 domain|Ribosomal protein S7, bacterial/organellar-type|Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412|GO:0015935 G3DSA:1.10.455.10|MF_00480_B|PF00177|PIRSF002122|PS00052|SSF47973|TIGR01029 BKD09_RS22740 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000640|IPR000795|IPR004161|IPR004540|IPR005225|IPR005517|IPR009000|IPR009022|IPR014721|IPR020568|IPR027417|IPR031157 Elongation factor G, III-V domain|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFG, V domain|Translation elongation factor EFG/EF2|Translation elongation factor EFG/EF2, domain IV|Translation elongation factor EFTu-like, domain 2|Translation protein, beta-barrel domain GO:0003746|GO:0003924|GO:0005525|GO:0005622|GO:0006414 G3DSA:2.40.30.10|G3DSA:3.30.230.10|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|MF_00054_B|PF00009|PF00679|PF03144|PF03764|PF14492|PR00315|PS00301|SM00838|SM00889|SSF50447|SSF52540|SSF54211|SSF54980|TIGR00231|TIGR00484 BKD09_RS22745 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000795|IPR004160|IPR004161|IPR004541|IPR005225|IPR009000|IPR009001|IPR027417|IPR031157 P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal|Translation elongation factor EFTu-like, domain 2|Translation elongation factor EFTu/EF1A, C-terminal|Translation elongation factor EFTu/EF1A, bacterial/organelle|Translation protein, beta-barrel domain GO:0003746|GO:0003924|GO:0005525|GO:0005622|GO:0006414 G3DSA:2.40.30.10|G3DSA:3.40.50.300|MF_00118_B|PF00009|PF03143|PF03144|PR00315|PS00301|SSF50447|SSF50465|SSF52540|TIGR00231|TIGR00485 BKD09_RS22750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001848|IPR018268|IPR027486 Ribosomal protein S10|Ribosomal protein S10 domain|Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.70.600|MF_00508|PF00338|PR00971|PS00361|SM01403|SSF54999|TIGR01049 BKD09_RS22755 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000597|IPR009000|IPR019926|IPR019927 Ribosomal protein L3|Ribosomal protein L3, bacterial/organelle-type|Ribosomal protein L3, conserved site|Translation protein, beta-barrel domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.40.30.10|G3DSA:4.10.960.10|MF_01325_B|PF00297|PS00474|SSF50447|TIGR03625 BKD09_RS22760 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002136|IPR013005|IPR023574 50S ribosomal protein uL4|Ribosomal protein L4 domain|Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 G3DSA:3.40.1370.10|MF_01328_B|PF00573|SSF52166|TIGR03953 BKD09_RS22765 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001014|IPR012677|IPR012678|IPR013025 Nucleotide-binding alpha-beta plait domain|Ribosomal protein L23/L15e core domain|Ribosomal protein L23/L25, conserved site|Ribosomal protein L25/L23 GO:0000166|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.70.330|MF_01369_B|PF00276|PS00050|SSF54189 BKD09_RS22770 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002171|IPR005880|IPR008991|IPR012340|IPR014722|IPR014726|IPR022666|IPR022669|IPR022671 Nucleic acid-binding, OB-fold|Ribosomal Proteins L2, RNA binding domain|Ribosomal protein L2|Ribosomal protein L2 domain 2|Ribosomal protein L2, C-terminal|Ribosomal protein L2, bacterial/organellar-type|Ribosomal protein L2, conserved site|Ribosomal protein L2, domain 3|Translation protein SH3-like domain GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015934|GO:0016740 G3DSA:2.30.30.30|G3DSA:2.40.50.140|G3DSA:4.10.950.10|MF_01320_B|PF00181|PF03947|PIRSF002158|PS00467|SM01382|SM01383|SSF50104|SSF50249|TIGR01171 BKD09_RS22775 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002222|IPR005732|IPR020934|IPR023575 Ribosomal protein S19 conserved site|Ribosomal protein S19, bacterial-type|Ribosomal protein S19, superfamily|Ribosomal protein S19/S15 GO:0003723|GO:0003735|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.30.860.10|MF_00531|PF00203|PIRSF002144|PR00975|PS00323|SSF54570|TIGR01050 BKD09_RS22780 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001063|IPR005727 Ribosomal protein L22, bacterial/chloroplast-type|Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412|GO:0015934 G3DSA:3.90.470.10|MF_01331_B|PF00237|SSF54843|TIGR01044 BKD09_RS22785 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001351|IPR004044|IPR004087|IPR005704|IPR009019|IPR015946|IPR018280 K Homology domain|K Homology domain, type 2|K homology domain, prokaryotic type|K homology domain-like, alpha/beta|Ribosomal protein S3, C-terminal|Ribosomal protein S3, bacterial|Ribosomal protein S3, conserved site GO:0003676|GO:0003723|GO:0003735|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.30.1140.32|G3DSA:3.30.300.20|MF_01309_B|PF00189|PF07650|PS00548|SM00322|SSF54814|SSF54821|TIGR01009 BKD09_RS22790 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000114|IPR016180|IPR020798 Ribosomal protein L10e/L16|Ribosomal protein L16|Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 G3DSA:3.90.1170.10|MF_01342|PF00252|PR00060|PS00586|PS00701|SSF54686|TIGR01164 BKD09_RS22795 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001854|IPR018254 Ribosomal protein L29|Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.10.287.310|MF_00374|PF00831|PS00579|SSF46561|TIGR00012 BKD09_RS22800 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000266|IPR012340|IPR019979|IPR019984 Nucleic acid-binding, OB-fold|Ribosomal protein S17, bacterial-type|Ribosomal protein S17, conserved site|Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.40.50.140|MF_01345_B|PD001295|PF00366|PR00973|PS00056|SSF50249|TIGR03635 BKD09_RS22805 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000218|IPR005745|IPR019972 Ribosomal protein L14P|Ribosomal protein L14P, conserved site|Ribosomal protein L14P, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0015934 G3DSA:2.40.150.20|MF_01367|PF00238|PS00049|SM01374|SSF50193|TIGR01067 BKD09_RS22810 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003256|IPR005824|IPR005825|IPR008991|IPR014722 KOW|Ribosomal protein L2 domain 2|Ribosomal protein L24|Ribosomal protein L24/L26, conserved site|Translation protein SH3-like domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.30.30.30|MF_01326_B|PF17136|PS01108|SM00739|SSF50104|TIGR01079 BKD09_RS22815 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002132|IPR020929|IPR020930|IPR022803|IPR031309|IPR031310 Ribosomal protein L5|Ribosomal protein L5 domain|Ribosomal protein L5, C-terminal|Ribosomal protein L5, N-terminal|Ribosomal protein L5, bacterial-type|Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.1440.10|MF_01333_B|PF00281|PF00673|PIRSF002161|PS00358|SSF55282 BKD09_RS22820 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001209|IPR023036 Ribosomal protein S14|Ribosomal protein S14, bacterial/plastid GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:4.10.830.10|MF_00537|PF00253|SSF57716 BKD09_RS22825 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 G3DSA:3.30.1370.30|G3DSA:3.30.1490.10|MF_01302_B|PF00410|PS00053|SSF56047 BKD09_RS22830 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000702|IPR002358|IPR019906|IPR020040 Ribosomal protein L6|Ribosomal protein L6, alpha-beta domain|Ribosomal protein L6, bacterial-type|Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 G3DSA:3.90.930.12|MF_01365_B|PF00347|PIRSF002162|PR00059|PS00525|SSF56053|TIGR03654 BKD09_RS22835 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004389|IPR005484 Ribosomal protein L18|Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.420.100|MF_01337_B|PF00861|SSF53137|TIGR00060 BKD09_RS22840 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005324|IPR005712|IPR013810|IPR014720|IPR014721|IPR018192|IPR020568 Double-stranded RNA-binding domain|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Ribosomal protein S5, C-terminal|Ribosomal protein S5, N-terminal|Ribosomal protein S5, N-terminal, conserved site|Ribosomal protein S5, bacterial-type GO:0003723|GO:0003735|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.30.160.20|G3DSA:3.30.230.10|MF_01307_B|PF00333|PF03719|PS00585|SSF54211|SSF54768|TIGR01021 BKD09_RS22845 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005996|IPR016082 Ribosomal protein L30, bacterial-type|Ribosomal protein L30, ferredoxin-like fold domain GO:0003735|GO:0006412|GO:0015934 G3DSA:3.30.1390.20|MF_01371_B|PF00327|PIRSF002211|SSF55129|TIGR01308 BKD09_RS22850 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001196|IPR005749|IPR021131|IPR030878 Ribosomal protein L15|Ribosomal protein L15, bacterial-type|Ribosomal protein L15, conserved site|Ribosomal protein L18e/L15P GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015934 G3DSA:3.100.10.10|MF_01341|PF00828|PS00475|SSF52080|TIGR01071 BKD09_RS22855 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002208|IPR023201|IPR026593|IPR030659 Protein translocase subunit SecY|SecY conserved site|SecY subunit domain|SecY/SEC61-alpha family GO:0015031|GO:0016020 G3DSA:1.10.3370.10|MF_01465|PF00344|PIRSF004557|PR00303|PS00756|SSF103491|TIGR00967 BKD09_RS22860 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000850|IPR006259|IPR027417 Adenylate kinase subfamily|Adenylate kinase/UMP-CMP kinase|P-loop containing nucleoside triphosphate hydrolase GO:0004017|GO:0005524|GO:0006139|GO:0016776|GO:0019205 G3DSA:3.40.50.300|MF_00235|PF00406|PR00094|PS00113|SSF52540|TIGR01351 BKD09_RS22865 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001892|IPR010979|IPR018269|IPR019980|IPR027437 30s ribosomal protein S13, C-terminal|Ribosomal protein S13|Ribosomal protein S13, bacterial-type|Ribosomal protein S13, conserved site|Ribosomal protein S13-like, H2TH GO:0003676|GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.10.8.50|G3DSA:4.10.910.10|MF_01315|PF00416|PIRSF002134|PS00646|SSF46946|TIGR03631 BKD09_RS22870 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001971|IPR019981 Ribosomal protein S11|Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.420.80|MF_01310|PF00411|PIRSF002131|SSF53137|TIGR03632 BKD09_RS22875 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009025|IPR011260|IPR011262|IPR011263|IPR011773 DNA-directed RNA polymerase, RBP11-like dimerisation domain|DNA-directed RNA polymerase, RpoA/D/Rpb3-type|DNA-directed RNA polymerase, alpha subunit|DNA-directed RNA polymerase, insert domain|RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351|GO:0046983 G3DSA:1.10.150.20|G3DSA:2.170.120.12|G3DSA:3.30.1360.10|MF_00059|PD001179|PF01000|PF01193|PF03118|SM00662|SSF47789|SSF55257|SSF56553|TIGR02027 BKD09_RS22880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.90.1030.10|MF_01368|PF01196|PS01167|SSF64263|TIGR00059 BKD09_RS22885 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF00034|SSF46626 BKD09_RS22890 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF00106|PR00080|PR00081|SM00822|SSF51735 BKD09_RS22895 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011032|IPR013154|IPR014182|IPR016040|IPR020843 Alcohol dehydrogenase, N-terminal|Alcohol dehydrogenase, zinc-binding type 1|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF08240|PF13602|SM00829|SSF50129|SSF51735|TIGR02817 BKD09_RS22900 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002577|IPR011991 Helix-turn-helix, HxlR type|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF01638|SSF46785 BKD09_RS22905 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010870|IPR023614 Phosphate-selective porin O/P|Porin domain G3DSA:2.40.160.10|PF07396|SSF56935 BKD09_RS22910 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001478|IPR001940|IPR009003|IPR011782 PDZ domain|Peptidase S1, PA clan|Peptidase S1C|Peptidase S1C, Do GO:0004252|GO:0005515|GO:0006508 G3DSA:2.30.42.10|G3DSA:2.40.10.10|PF13180|PF13365|PR00834|SM00228|SSF50156|SSF50494|TIGR02037 BKD09_RS22915 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003593|IPR008824|IPR008921|IPR021886|IPR027417|IPR032423 AAA ATPase, C-terminal domain|AAA+ ATPase domain|DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|Holliday junction DNA helicase ruvB, N-terminal|MgsA AAA+ ATPase C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0006260|GO:0006281|GO:0006310|GO:0009378 G3DSA:1.10.3710.10|G3DSA:1.10.8.60|G3DSA:1.20.272.10|G3DSA:3.40.50.300|PF05496|PF12002|PF16193|SM00382|SSF48019|SSF52540 BKD09_RS22920 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002942|IPR006145|IPR006224|IPR006225|IPR020103 Pseudouridine synthase, RluC/RluD|Pseudouridine synthase, RluC/RluD, conserved site|Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.10.290.10|PF00849|PF01479|PS01129|SM00363|SSF55120|SSF55174|TIGR00005 BKD09_RS22930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011419|IPR023335 ATP12, ATPase F1F0-assembly protein|Orthogonal Bundle domain in ATP12 GO:0043461 G3DSA:1.10.3580.10|G3DSA:3.30.2180.10|PF07542|SSF160909 BKD09_RS22935 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021136 Flagellar hook-length control protein-like, C-terminal PF02120 BKD09_RS22940 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006135|IPR029025 Type III secretion system substrate exporter|Type III secretion system substrate exporter, C-terminal GO:0009306|GO:0016020 G3DSA:3.40.1690.10|PF01312|SSF160544 BKD09_RS22945 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001460|IPR002137|IPR012338 Beta-lactamase, class-D active site|Beta-lactamase/transpeptidase-like|Penicillin-binding protein, transpeptidase GO:0008658|GO:0008800|GO:0017001 G3DSA:3.40.710.10|PF00905|PS00337|SSF56601 BKD09_RS22950 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029032 AhpD-like G3DSA:1.20.1290.10|SSF69118 BKD09_RS22955 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002925|IPR029058 Alpha/Beta hydrolase fold|Dienelactone hydrolase GO:0016787 G3DSA:3.40.50.1820|PF01738|SSF53474 BKD09_RS22965 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025356 Protein of unknown function DUF4260 PF14079 BKD09_RS22970 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000022|IPR029045 Carboxyl transferase|ClpP/crotonase-like domain G3DSA:3.90.226.10|PF01039|SSF52096 BKD09_RS22980 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004045|IPR010987|IPR012336 Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF02798|SSF47616|SSF52833 BKD09_RS22985 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002059|IPR002182|IPR011990|IPR012340|IPR027417 Cold-shock protein, DNA-binding|NB-ARC|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Tetratricopeptide-like helical domain GO:0003677|GO:0005515|GO:0006355|GO:0043531 G3DSA:1.25.40.10|G3DSA:2.40.50.140|G3DSA:3.40.50.300|PF00313|PF00931|SSF48452|SSF50249|SSF52540 BKD09_RS22995 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011008 Dimeric alpha-beta barrel SSF54909 BKD09_RS23010 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR000639|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Epoxide hydrolase-like GO:0003824 G3DSA:3.40.50.1820|PF00561|PR00111|PR00412|SSF53474 BKD09_RS23015 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001845|IPR011991 HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12840|PR00778|SM00418|SSF46785 BKD09_RS23020 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011008|IPR012577 Dimeric alpha-beta barrel|NIPSNAP G3DSA:3.30.70.900|PF07978|SSF54909 BKD09_RS23025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007138|IPR011008 Antibiotic biosynthesis monooxygenase domain|Dimeric alpha-beta barrel G3DSA:3.30.70.900|PF03992|SSF54909 BKD09_RS23030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 G3DSA:3.20.20.60|PF13714|SSF51621 BKD09_RS23040 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR012337 Homeodomain-like|Ribonuclease H-like domain GO:0003676|GO:0003677 G3DSA:1.10.10.60|G3DSA:3.30.420.10|PF13358|PF13565|SSF46689|SSF53098 BKD09_RS23045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005115 Uncharacterised domain UPF0126 PF03458 BKD09_RS23050 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008168|IPR009056|IPR014353 Cytochrome c, class IC|Cytochrome c-like domain|Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0009055|GO:0016020|GO:0016614|GO:0020037 G3DSA:1.10.760.10|PF00034|PF13442|PIRSF000018|PR00605|SSF46626 BKD09_RS23055 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002869|IPR011766|IPR019752|IPR029061 Pyruvate-flavodoxin oxidoreductase, central domain|Pyruvate/ketoisovalerate oxidoreductase, catalytic domain|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0016491|GO:0016903|GO:0030976|GO:0055114 G3DSA:3.40.50.970|G3DSA:3.40.920.10|PF01558|PF02775|SSF52518|SSF53323 BKD09_RS23065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002155|IPR016039 Thiolase|Thiolase-like GO:0003824|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PIRSF000429|SSF53901 BKD09_RS23070 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002878|IPR012340|IPR022002 Domain of unknown function DUF35, OB-fold, C-terminal|Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal|Nucleic acid-binding, OB-fold PF01796|PF12172|SSF50249 BKD09_RS23075 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002539|IPR029069 HotDog domain|MaoC-like domain G3DSA:3.10.129.10|PF01575|PF13452|SSF54637 BKD09_RS23080 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|SM00822|SSF51735 BKD09_RS23085 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002220|IPR013785 Aldolase-type TIM barrel|DapA-like GO:0003824|GO:0008152|GO:0016829 G3DSA:3.20.20.70|PF00701|PIRSF001365|SM01130|SSF51569 BKD09_RS23090 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015797 NUDIX hydrolase domain-like GO:0016787 G3DSA:3.90.79.10|SSF55811 BKD09_RS23095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 BKD09_RS23100 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR001610|IPR003594|IPR003660|IPR004358|IPR013656 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold-4|Signal transduction histidine kinase-related protein, C-terminal GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00672|PF02518|PF08448|PF13426|PR00344|SM00086|SM00091|SM00304|SM00387|SSF158472|SSF55785|SSF55874|TIGR00229 BKD09_RS23105 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032417 T3SS negative regulator GrlR PF16518 BKD09_RS23115 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|SSF54593 BKD09_RS23140 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR018060 DNA binding HTH domain, AraC-type|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|SM00342 BKD09_RS23160 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019291 Host attachment protein PF10116 BKD09_RS23175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 BKD09_RS23190 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002081|IPR005101|IPR006050|IPR014729|IPR018394 Cryptochrome/DNA photolyase class 1|Cryptochrome/DNA photolyase class 1, conserved site, C-terminal|Cryptochrome/DNA photolyase, FAD-binding domain|DNA photolyase, N-terminal|Rossmann-like alpha/beta/alpha sandwich fold G3DSA:1.10.579.10|G3DSA:1.25.40.80|G3DSA:3.40.50.620|PF00875|PF03441|PR00147|PS00691|SSF48173|SSF52425 BKD09_RS23195 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003660|IPR004089|IPR029151|IPR033462 Cache 3/Cache 2 fusion domain|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain|Periplasmic sensor domain-like GO:0004871|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|G3DSA:3.30.450.20|PF00015|PF00672|PF17201|SM00283|SM00304|SSF103190|SSF58104 BKD09_RS23200 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000866|IPR012336|IPR019479|IPR024706 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Peroxiredoxin, AhpC-type|Peroxiredoxin, C-terminal|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0051920|GO:0055114 G3DSA:3.30.1020.10|G3DSA:3.40.30.10|PF00578|PF10417|PIRSF000239|SSF52833 BKD09_RS23210 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002591|IPR017849|IPR017850 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824|GO:0008152 G3DSA:3.40.720.10|PF01663|SSF53649 BKD09_RS23215 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS23220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|SM00822|SSF51735 BKD09_RS23225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003779|IPR029032 AhpD-like|Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 G3DSA:1.20.1290.10|PF02627|SSF69118 BKD09_RS23230 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 BKD09_RS23235 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016888 Uncharacterised conserved protein UCP028498 PF10012|PIRSF028498 BKD09_RS23245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|SSF55729 BKD09_RS23250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00081|SSF51735 BKD09_RS23255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 BKD09_RS23260 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001466|IPR012338 Beta-lactamase-related|Beta-lactamase/transpeptidase-like G3DSA:3.40.710.10|PF00144|SSF56601 BKD09_RS23265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001845|IPR011991 HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12840|PR00778|SM00418|SSF46785 BKD09_RS23270 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013538|IPR023393 Activator of Hsp90 ATPase homologue 1-like|START-like domain GO:0006950 G3DSA:3.30.530.20|PF08327|SSF55961 BKD09_RS23280 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|SM00421|SM00448|SSF46894|SSF52172 BKD09_RS23285 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003594|IPR003660|IPR011712 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0004871|GO:0007165|GO:0016021|GO:0046983 G3DSA:3.30.565.10|PF07730|SM00304|SM00387|SSF55874 BKD09_RS23290 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021698 Protein of unknown function DUF2380 PF11684 BKD09_RS23295 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002328|IPR011032|IPR013149|IPR013154|IPR016040 Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|Alcohol dehydrogenase, zinc-type, conserved site|GroES-like|NAD(P)-binding domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PS00059|SSF50129|SSF51735 BKD09_RS23300 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SSF51735 BKD09_RS23305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013341|IPR013342|IPR029017|IPR029065 Enolase C-terminal domain-like|Enolase N-terminal domain-like|Mandelate racemase/muconate lactonizing enzyme, C-terminal|Mandelate racemase/muconate lactonizing enzyme, N-terminal domain G3DSA:3.20.20.120|G3DSA:3.30.390.10|PF02746|PF13378|SM00922|SSF51604|SSF54826 BKD09_RS23310 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|SM00345|SSF46785|SSF48008 BKD09_RS23315 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005828|IPR005829|IPR020846 Major facilitator superfamily domain|Major facilitator, sugar transporter-like|Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1250.20|PF00083|PS00216|PS00217|SSF103473 BKD09_RS23325 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PF02040|PR00758 BKD09_RS23330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS23335 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 BKD09_RS23340 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR001610|IPR001789|IPR003594|IPR003661|IPR004358|IPR011006|IPR013655|IPR013656 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold-3|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0005515|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PF08447|PF08448|PR00344|SM00086|SM00091|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55785|SSF55874|TIGR00229 BKD09_RS23345 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011201|IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase|Zinc-ribbon domain, bacteria PF10005|PF15887|PIRSF012641 BKD09_RS23350 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000089|IPR001882|IPR005479|IPR005481|IPR005482|IPR011053|IPR011054|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Biotin carboxylase, C-terminal|Biotin carboxylase-like, N-terminal domain|Biotin-binding site|Biotin/lipoyl attachment|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain|Pre-ATP-grasp domain|Rudiment single hybrid motif|Single hybrid motif GO:0003824|GO:0005524 G3DSA:2.40.50.100|G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|PF00289|PF00364|PF02785|PF02786|PS00188|PS00866|PS00867|SM00878|SSF51230|SSF51246|SSF52440|SSF56059 BKD09_RS23355 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015813|IPR023687 Oxaloacetate decarboxylase, bacterial|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0008948 G3DSA:3.20.20.60|MF_01299|PF13714|SSF51621 BKD09_RS23360 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001792|IPR017968 Acylphosphatase, conserved site|Acylphosphatase-like domain G3DSA:3.30.70.100|PF00708|PS00151|SSF54975 BKD09_RS23365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR001789|IPR003594|IPR003661|IPR004358|IPR011006 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAS domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PF13426|PR00344|SM00091|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55785|SSF55874|TIGR00229 BKD09_RS23370 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011991|IPR026282 DNA-binding protein, MJ1563 type|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF12802|PIRSF006707|SSF46785 BKD09_RS23375 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025311 Domain of unknown function DUF4166 PF13761 BKD09_RS23380 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001509|IPR010099|IPR013549|IPR016040 Domain of unknown function DUF1731|Epimerase family protein SDR39U1|NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|PF01370|PF08338|SSF51735|TIGR01777 BKD09_RS23390 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS23395 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004370|IPR014347 4-oxalocrotonate tautomerase|Tautomerase/MIF superfamily GO:0006725|GO:0016853 G3DSA:3.30.429.20|PF01361|SSF55331 BKD09_RS23400 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13481|SSF52540 BKD09_RS23405 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000544|IPR004143|IPR020605 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain|Octanoyltransferase|Octanoyltransferase, conserved site GO:0005737|GO:0006464|GO:0009107|GO:0016415 G3DSA:3.90.1550.10|MF_00013|PD006086|PF03099|PIRSF016262|PS01313|SSF55681|TIGR00214 BKD09_RS23410 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001172|IPR001543 Flagellar motor switch FliN/Type III secretion HrcQb|Surface presentation of antigen (SpoA) GO:0003774|GO:0006935|GO:0009425|GO:0071973 G3DSA:2.30.330.10|PF01052|PR00956|SSF101801 BKD09_RS23420 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018688 Protein of unknown function DUF2182, transmembrane, metal-binding PF09948 BKD09_RS23425 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009758|IPR014581 Protein of unknown function DUF1326|Uncharacterised conserved protein UCP033303 PF07040|PIRSF033303 BKD09_RS23430 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002921|IPR029058 Alpha/Beta hydrolase fold|Fungal lipase-like domain GO:0006629 G3DSA:3.40.50.1820|PF01764|SSF53474 BKD09_RS23440 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003495|IPR011629|IPR027417 CobW/HypB/UreG, nucleotide-binding domain|Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.30.1220.10|G3DSA:3.40.50.300|PF02492|PF07683|SM00833|SSF52540 BKD09_RS23455 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002509|IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF01522|SSF88713 BKD09_RS23460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002509|IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF01522|SSF88713 BKD09_RS23465 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000644|IPR006667|IPR006668|IPR006669 CBS domain|Magnesium transporter MgtE|Magnesium transporter, MgtE intracellular domain|SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324|GO:0015095|GO:0015693|GO:0016020 G3DSA:1.10.357.20|G3DSA:1.25.60.10|G3DSA:3.10.580.10|PF00571|PF01769|PF03448|SM00116|SM00924|SSF158791|SSF161093|SSF54631|TIGR00400 BKD09_RS23470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF13560|SM00530|SSF47413 BKD09_RS23475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018170|IPR020471|IPR023210 Aldo/keto reductase|Aldo/keto reductase, conserved site|NADP-dependent oxidoreductase domain GO:0016491|GO:0055114 G3DSA:3.20.20.100|PF00248|PIRSF000097|PR00069|PS00062|PS00798|SSF51430 BKD09_RS23480 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic PR01217 BKD09_RS23495 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006747 Protein of unknown function DUF599 PF04654 BKD09_RS23500 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004045|IPR010987|IPR012336 Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF13410|PF13417|SSF47616|SSF52833 BKD09_RS23505 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009282|IPR027405 Protein of unknown function DUF937|YidB-like G3DSA:1.10.10.690|PF06078|SSF140804 BKD09_RS23520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008320 Uncharacterised conserved protein UCP032025 PF07370|PIRSF032025 BKD09_RS23530 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003721|IPR014729 Pantoate-beta-alanine ligase|Rossmann-like alpha/beta/alpha sandwich fold GO:0004592|GO:0015940 G3DSA:3.30.1300.10|G3DSA:3.40.50.620|MF_00158|PF02569|SSF52374|TIGR00018 BKD09_RS23535 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015223|IPR027417 ATPase MipZ|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF09140|SSF52540 BKD09_RS23540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR017395|IPR029058 Alpha/Beta hydrolase fold|Chlorophyllase GO:0015996|GO:0047746 G3DSA:3.40.50.1820|PF12740|SSF53474 BKD09_RS23545 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002035 von Willebrand factor, type A SSF53300 BKD09_RS23550 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001623 DnaJ domain G3DSA:1.10.287.110|PF00226|SM00271|SSF46565 BKD09_RS23555 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001967|IPR007730|IPR012338|IPR018044 Beta-lactamase/transpeptidase-like|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal|Sporulation-related domain GO:0006508|GO:0009002|GO:0042834 G3DSA:3.30.70.1070|G3DSA:3.40.710.10|PF00768|PF05036|PR00725|SSF56601 BKD09_RS23560 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010127|IPR018968 Phasin|Phasin, subfamily 1 PF09361|TIGR01841 BKD09_RS23570 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003769|IPR014719|IPR022935 ATP-dependent Clp protease adaptor protein ClpS|Adaptor protein ClpS, core|Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like GO:0030163 G3DSA:3.30.1390.10|MF_00302|PF02617|SSF54736 BKD09_RS23575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001270|IPR003593|IPR003959|IPR004176|IPR013461|IPR018368|IPR019489|IPR027417|IPR028299 AAA+ ATPase domain|ATP-dependent Clp protease ATP-binding subunit ClpA|ATPase, AAA-type, core|Clp ATPase, C-terminal|Clp, N-terminal|ClpA/B family|ClpA/B, conserved site 1|ClpA/B, conserved site 2|P-loop containing nucleoside triphosphate hydrolase GO:0004176|GO:0005524|GO:0019538 G3DSA:1.10.1780.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00004|PF02861|PF07724|PF10431|PR00300|PS00870|PS00871|SM00382|SM01086|SSF52540|SSF81923|TIGR02639 BKD09_RS23580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000123|IPR000477|IPR013597|IPR030931 Group II intron reverse transcriptase/maturase|Group II intron, maturase-specific|RNA-directed DNA polymerase (reverse transcriptase), msDNA|Reverse transcriptase domain GO:0003723|GO:0003964|GO:0006278 PF00078|PF08388|PR00866|SSF56672|TIGR04416 BKD09_RS23585 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013229 PEGA PF08308 BKD09_RS23590 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PR01036|SSF103473 BKD09_RS23595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018170|IPR020471|IPR023210 Aldo/keto reductase|Aldo/keto reductase, conserved site|NADP-dependent oxidoreductase domain GO:0016491|GO:0055114 G3DSA:3.20.20.100|PF00248|PR00069|PS00062|SSF51430 BKD09_RS23605 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003313|IPR009057|IPR018060|IPR020449 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|Homeodomain-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PF14525|PR00032|SM00342|SSF46689 BKD09_RS23610 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000132|IPR003010 Carbon-nitrogen hydrolase|Nitrilase/cyanide hydratase, conserved site GO:0006807|GO:0016810 G3DSA:3.60.110.10|PF00795|PS00920|PS00921|SSF56317 BKD09_RS23615 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025702 Haem-containing dehydratase PD320837|PF13816 BKD09_RS23620 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023198|IPR023214 HAD-like domain|Phosphoglycolate phosphatase, domain 2 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|SSF56784 BKD09_RS23630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR017738 Type VI secretion system-associated, VCA0118 PF11319 BKD09_RS23635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001296|IPR008928|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain|Six-hairpin glycosidase-like GO:0003824 G3DSA:3.40.50.2000|PF00534|PF13439|SSF48208|SSF53756 BKD09_RS23640 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007184|IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain|Mannoside phosphorylase G3DSA:2.115.10.20|PF04041|SSF75005 BKD09_RS23655 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PF03480 BKD09_RS23660 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007730|IPR008258|IPR023346 Lysozyme-like domain|Sporulation-related domain|Transglycosylase SLT domain 1 GO:0042834 G3DSA:1.10.530.10|PF01464|PF05036|SSF53955 BKD09_RS23665 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011606 Branched-chain amino acid transport, permease PF03591 BKD09_RS23670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008407 Branched-chain amino acid transport, AzlD PF05437 BKD09_RS23675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023370 TsaA-like domain G3DSA:2.40.30.70|PF01980|SSF118196|TIGR00104 BKD09_RS23680 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001310|IPR011146 HIT-like domain|Histidine triad (HIT) protein GO:0003824 G3DSA:3.30.428.10|PF01230|PR00332|SSF54197 BKD09_RS23685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007434|IPR016181 Acyl-CoA N-acyltransferase|Peptidogalycan biosysnthesis/recognition G3DSA:3.40.630.30|PF04339|SSF55729 BKD09_RS23690 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR017946|IPR030395 Glycerophosphodiester phosphodiesterase domain|PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 G3DSA:3.20.20.190|PF03009|SSF51695 BKD09_RS23695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013813 Endoribonuclease L-PSP/chorismate mutase-like G3DSA:3.30.1330.40|PF14588|SSF55298 BKD09_RS23700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015000 Protein of unknown function DUF1849 PF08904 BKD09_RS23705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006175|IPR013813 Endoribonuclease L-PSP/chorismate mutase-like|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|SSF55298 BKD09_RS23710 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018717|IPR027795 Domain of unknown function DUF2241|GATS-like ACT domain G3DSA:3.30.2130.10|PF10000|PF13840|SSF55021 BKD09_RS23720 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001126|IPR017961|IPR022880 DNA polymerase IV|DNA polymerase, Y-family, little finger domain|UmuC domain GO:0003684|GO:0003887|GO:0006281 G3DSA:1.10.150.20|G3DSA:3.30.1490.100|G3DSA:3.30.70.270|MF_01113|PF00817|PF11799|SSF100879|SSF56672 BKD09_RS23725 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021955 Protein of unknown function DUF3572 PF12096 BKD09_RS23730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 BKD09_RS23735 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000160|IPR001789|IPR011006|IPR029787 CheY-like superfamily|GGDEF domain|Nucleotide cyclase|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.30.70.270|G3DSA:3.40.50.2300|PF00072|PF00990|SM00267|SM00448|SSF52172|SSF55073|TIGR00254 BKD09_RS23740 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|SSF46689|SSF48498 BKD09_RS23745 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS23750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011051|IPR014710 RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|SSF51182 BKD09_RS23760 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic SSF141523 BKD09_RS23765 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|SSF51735 BKD09_RS23775 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012413 BA14k family GO:0009405 PF07886 BKD09_RS23785 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001705|IPR011332 Ribosomal protein L33|Zinc-binding ribosomal protein GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00294|PF00471|SSF57829|TIGR01023 BKD09_RS23790 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011251|IPR016215 Luciferase-like domain|Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497|GO:0016705|GO:0055114 G3DSA:3.20.20.30|PF00296|PIRSF000337|SSF51679|TIGR03860 BKD09_RS23795 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002933|IPR011650|IPR017439 Amidohydrolase|Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PIRSF005962|SSF53187|SSF55031|TIGR01891 BKD09_RS23805 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|SSF56300 BKD09_RS23810 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015797 NUDIX hydrolase domain-like GO:0016787 G3DSA:3.90.79.10|SSF55811 BKD09_RS23815 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009325 Protein of unknown function DUF983 PF06170 BKD09_RS23820 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003029|IPR004476|IPR011805|IPR012340|IPR022966|IPR022967 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|Ribonuclease II/R, conserved site|Ribonuclease II/ribonuclease R|Ribonuclease R|S1 domain GO:0003676|GO:0003723|GO:0004518|GO:0004540|GO:0016070 G3DSA:2.40.50.140|MF_01895|PF00575|PF00773|PS01175|SM00316|SM00955|SSF50249|TIGR00358|TIGR02063 BKD09_RS23825 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000380|IPR003601|IPR003602|IPR005733|IPR006171|IPR013497|IPR013498|IPR013824|IPR013825|IPR023405|IPR023406|IPR025589|IPR028612 DNA topoisomerase I, bacterial-type|DNA topoisomerase I, type IA|DNA topoisomerase, type IA|DNA topoisomerase, type IA, DNA-binding domain|DNA topoisomerase, type IA, active site|DNA topoisomerase, type IA, central|DNA topoisomerase, type IA, central region, subdomain 1|DNA topoisomerase, type IA, central region, subdomain 2|DNA topoisomerase, type IA, core domain|DNA topoisomerase, type IA, domain 2|DNA topoisomerase, type IA, zn finger|Topoisomerase C-terminal repeat|Toprim domain GO:0003677|GO:0003916|GO:0003917|GO:0005694|GO:0006265 G3DSA:1.10.460.10|G3DSA:2.70.20.10|G3DSA:3.30.65.10|G3DSA:3.40.50.140|MF_00952|PF01131|PF01396|PF01751|PF13368|PR00417|PS00396|SM00436|SM00437|SM00493|SSF56712|SSF57783|TIGR01051 BKD09_RS23835 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002577|IPR011991 Helix-turn-helix, HxlR type|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF01638|SSF46785 BKD09_RS23840 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SM00822|SSF51735 BKD09_RS23850 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003680|IPR023048|IPR029039 Flavodoxin-like fold|Flavoprotein-like domain|NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 G3DSA:3.40.50.360|MF_01216|PF02525|SSF52218 BKD09_RS23855 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002577|IPR011991 Helix-turn-helix, HxlR type|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF01638|SSF46785 BKD09_RS23860 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003488 DNA recombination-mediator protein A GO:0009294 G3DSA:3.40.50.450|PF02481|SSF102405|TIGR00732 BKD09_RS23865 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007487 ABC transporter, substrate-binding protein G3DSA:3.40.50.2300|PF04392 BKD09_RS23870 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029055|IPR032808 DoxX family|Nucleophile aminohydrolases, N-terminal G3DSA:3.60.20.10|PF07681 BKD09_RS23875 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023631 Amidase signature domain G3DSA:3.90.1300.10|PF01425|SSF75304 BKD09_RS23880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002641|IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase|Patatin/Phospholipase A2-related GO:0006629|GO:0008152 G3DSA:3.40.1090.10|PF01734|SSF52151 BKD09_RS23885 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 MF_01043|PF02660|SM01207|TIGR00023 BKD09_RS23890 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004722|IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Dihydroorotase|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0004151|GO:0006221|GO:0016787|GO:0016810|GO:0046872 G3DSA:2.30.40.10|G3DSA:3.20.20.140|MF_00220_B|PF01979|SSF51338|SSF51556|TIGR00857 BKD09_RS23895 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002082|IPR006130|IPR006131|IPR006132 Aspartate carbamoyltransferase|Aspartate/ornithine carbamoyltransferase|Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain|Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0004070|GO:0006207|GO:0006520|GO:0016597|GO:0016743 G3DSA:3.40.50.1370|MF_00001|PF00185|PF02729|PR00100|PR00101|PS00097|SSF53671|TIGR00670 BKD09_RS23900 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000755|IPR009045 D-alanyl-D-alanine dipeptidase|Hedgehog signalling/DD-peptidase zinc-binding domain GO:0005618|GO:0006508|GO:0008237|GO:0016805 G3DSA:3.30.1380.10|MF_01924|PF01427|PIRSF026671|SSF55166 BKD09_RS23905 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003675 CAAX amino terminal protease GO:0016020 PF02517 BKD09_RS23910 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004776 Membrane transport protein GO:0016021|GO:0055085 PF03547 BKD09_RS23915 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005227|IPR006641|IPR012337 Putative pre-16S rRNA nuclease|Ribonuclease H-like domain|YqgF/RNase H-like domain GO:0003676|GO:0006139|GO:0006364 G3DSA:3.30.420.140|MF_00651|PF03652|SM00732|SSF53098|TIGR00250 BKD09_RS23925 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 G3DSA:3.50.30.50|PF04199|SSF102198 BKD09_RS23930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS23935 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004136|IPR013785 Aldolase-type TIM barrel|Nitronate monooxygenase GO:0003824|GO:0018580|GO:0055114 G3DSA:3.20.20.70|PF03060|SSF51412 BKD09_RS23940 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004136|IPR013785 Aldolase-type TIM barrel|Nitronate monooxygenase GO:0003824|GO:0018580|GO:0055114 G3DSA:3.20.20.70|PF03060|SSF51412 BKD09_RS23945 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 MF_00122|PF02686|SSF141000|TIGR00135 BKD09_RS23955 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004412|IPR020556|IPR023631 Amidase signature domain|Amidase, conserved site|Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 G3DSA:3.90.1300.10|MF_00120|PF01425|PS00571|SSF75304|TIGR00132 BKD09_RS23965 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003789|IPR004413|IPR006075|IPR017958|IPR018027 Asn/Gln amidotransferase|Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic|Aspartyl/glutamyl-tRNA amidotransferase subunit B-related|Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit|Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016874|GO:0016884 MF_00121|PF02637|PF02934|PS01234|SM00845|SSF55931|SSF89095|TIGR00133 BKD09_RS23975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10 BKD09_RS24015 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004921 Terminase, large subunit PF03237 BKD09_RS24060 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13481|SSF52540 BKD09_RS24070 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 G3DSA:3.30.1330.70|PF05866|SSF103084 BKD09_RS24080 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010260 Prophage CP4-57 regulatory protein (AlpA) PF05930 BKD09_RS24090 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002104|IPR011010|IPR013762|IPR023109|IPR025166 DNA breaking-rejoining enzyme, catalytic core|Domain of unknown function DUF4102|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PF13356|SSF56349 BKD09_RS24095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003684 Porin, alpha proteobacteria type GO:0006810|GO:0015288|GO:0016020 PF02530 BKD09_RS24105 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000189|IPR008258|IPR008939|IPR016026|IPR023346 Lysozyme-like domain|Lytic transglycosylase, superhelical U-shaped|Lytic transglycosylase, superhelical U-shaped and linker domain|Prokaryotic transglycosylase, active site|Transglycosylase SLT domain 1 GO:0000270|GO:0004553|GO:0008933|GO:0016020|GO:0042597 G3DSA:1.10.530.10|G3DSA:1.25.20.10|PF01464|PS00922|SSF48435|SSF53955 BKD09_RS24110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002220|IPR005263|IPR013785|IPR020624|IPR020625 4-hydroxy-tetrahydrodipicolinate synthase, DapA|Aldolase-type TIM barrel|DapA-like|Schiff base-forming aldolase, active site|Schiff base-forming aldolase, conserved site GO:0003824|GO:0008152|GO:0008840|GO:0009089|GO:0016829 G3DSA:3.20.20.70|MF_00418|PF00701|PIRSF001365|PR00146|PS00665|PS00666|SM01130|SSF51569|TIGR00674 BKD09_RS24115 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001185|IPR019823 Large-conductance mechanosensitive channel|Large-conductance mechanosensitive channel, conserved site GO:0005216|GO:0006810|GO:0016021 MF_00115|PF01741|PR01264|PS01327|SSF81330|TIGR00220 BKD09_RS24120 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000037|IPR020081|IPR023620 Small protein B|SsrA-binding protein|SsrA-binding protein, conserved site GO:0003723 G3DSA:2.40.280.10|MF_00023|PD004488|PF01668|PS01317|SSF74982|TIGR00086 BKD09_RS24125 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012336|IPR013740 Redoxin|Thioredoxin-like fold GO:0016491 G3DSA:3.40.30.10|PF08534|SSF52833 BKD09_RS24130 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005122 Uracil-DNA glycosylase-like G3DSA:3.40.470.10|PF03167|SM00986|SM00987|SSF52141 BKD09_RS24135 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021139|IPR029060 NYN domain, limkain-b1-type|PIN domain-like G3DSA:3.40.50.1010|PF01936 BKD09_RS24140 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003716|IPR006110|IPR012293 DNA-directed RNA polymerase, omega subunit|RNA polymerase subunit, RPB6/omega|RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 G3DSA:3.90.940.10|MF_00366|PF01192|SM01409|SSF63562|TIGR00690 BKD09_RS24145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002912|IPR003607|IPR004095|IPR004811|IPR007685|IPR012675|IPR012676 ACT domain|Beta-grasp domain|HD/PDEase domain|RelA/SpoT|RelA/SpoT family|TGS|TGS-like GO:0008152|GO:0015969|GO:0016597 G3DSA:3.10.20.30|G3DSA:3.30.460.10|G3DSA:3.30.70.260|PF02824|PF04607|PF13291|PF13328|SM00471|SM00954|SSF109604|SSF55021|SSF81271|SSF81301|TIGR00691 BKD09_RS24150 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004569|IPR013785 Aldolase-type TIM barrel|Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0003824|GO:0005737|GO:0008615|GO:0033856 G3DSA:3.20.20.70|MF_00279|PF03740|SSF63892|TIGR00559 BKD09_RS24155 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002582|IPR004568|IPR008278 4'-phosphopantetheinyl transferase superfamily|Holo-[acyl carrier protein] synthase|Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 G3DSA:3.90.470.20|MF_00101|PD004282|PF01648|SSF56214|TIGR00516|TIGR00556 BKD09_RS24160 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000223|IPR015927|IPR019757|IPR019758|IPR019759|IPR028360 Peptidase S24/S26, beta-ribbon domain|Peptidase S24/S26A/S26B|Peptidase S24/S26A/S26B/S26C|Peptidase S26A, signal peptidase I|Peptidase S26A, signal peptidase I, conserved site|Peptidase S26A, signal peptidase I, lysine active site GO:0006508|GO:0008236|GO:0016020|GO:0016021 G3DSA:2.10.109.10|PF00717|PR00727|PS00760|PS00761|SSF51306|TIGR02227 BKD09_RS24165 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000999|IPR011907|IPR014720 Double-stranded RNA-binding domain|Ribonuclease III|Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396|GO:0016075 G3DSA:1.10.1520.10|G3DSA:3.30.160.20|MF_00104|PF00035|PF14622|PS00517|SM00358|SM00535|SSF54768|SSF69065|TIGR02191 BKD09_RS24170 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004044|IPR005225|IPR005662|IPR006073|IPR009019|IPR015946|IPR027417 GTP binding domain|GTP-binding protein Era|K Homology domain, type 2|K homology domain, prokaryotic type|K homology domain-like, alpha/beta|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain GO:0003723|GO:0005525|GO:0005622 G3DSA:3.30.300.20|G3DSA:3.40.50.300|MF_00367|PF01926|PF07650|SSF52540|SSF54814|TIGR00231|TIGR00436 BKD09_RS24180 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003717|IPR012340|IPR022572 DNA replication/recombination mediator RecO, N-terminal|Nucleic acid-binding, OB-fold|Recombination protein O, RecO GO:0006281|GO:0006310 G3DSA:2.40.50.140|MF_00201|PD202328|PF02565|PF11967|SSF50249|SSF57863|TIGR00613 BKD09_RS24190 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002205|IPR005742|IPR006691|IPR013758|IPR013760|IPR024946 Arginine repressor C-terminal-like domain|DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel|DNA topoisomerase IV, subunit A, Gram-negative|DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta|DNA topoisomerase, type IIA, subunit A/C-terminal|DNA topoisomerase, type IIA-like domain GO:0003677|GO:0003916|GO:0003918|GO:0005524|GO:0005694|GO:0006259|GO:0006265 G3DSA:2.120.10.90|G3DSA:3.30.1360.40|G3DSA:3.90.199.10|MF_00936|PF00521|PF03989|SM00434|SSF101904|SSF56719|TIGR01062 BKD09_RS24195 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|SSF53850 BKD09_RS24200 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000172|IPR007867|IPR023753 FAD/NAD(P)-binding domain|Glucose-methanol-choline oxidoreductase, C-terminal|Glucose-methanol-choline oxidoreductase, N-terminal GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.30.560.10|G3DSA:3.50.50.60|PF00732|PF05199|PS00623|PS00624|SSF51905|SSF54373 BKD09_RS24205 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006315|IPR011250|IPR027385 Outer membrane autotransporter barrel|Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021|GO:0019867 G3DSA:2.40.160.20|PF13505|SSF56925|TIGR01414 BKD09_RS24210 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003370|IPR014047 Chromate transporter|Chromate transporter, long chain GO:0015109|GO:0015703 PF02417|PIRSF004810|TIGR00937 BKD09_RS24215 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001763|IPR018634 Chromate resistance exported protein|Rhodanese-like domain G3DSA:3.40.250.10|PF00581|PF09828|SM00450|SSF52821 BKD09_RS24220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002524|IPR027469 Cation efflux protein|Cation efflux protein transmembrane domain GO:0006812|GO:0008324|GO:0016021|GO:0055085 G3DSA:1.20.1510.10|PF01545|SSF161111|TIGR01297 BKD09_RS24225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|SM00849|SSF56281 BKD09_RS24230 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 BKD09_RS24240 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS24245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|Nucleotide cyclase GO:0009190|GO:0016849|GO:0035556 G3DSA:3.30.70.1230|PF00211|SM00044|SSF55073 BKD09_RS24250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012349|IPR024747 FMN-binding split barrel|Pyridoxamine 5'-phosphate oxidase-related GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF12900|SSF50475 BKD09_RS24255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR004839|IPR011991|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0003824|GO:0006355|GO:0009058|GO:0030170 G3DSA:1.10.10.10|G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PF00392|PR00035|SM00345|SSF46785|SSF53383 BKD09_RS24260 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010290|IPR020846 Major facilitator superfamily domain|Transmembrane secretion effector G3DSA:1.20.1250.20|PF05977|SSF103473 BKD09_RS24265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 MF_00221|PF01566|PR00447|TIGR01197 BKD09_RS24270 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007471|IPR007472|IPR016181|IPR017138 Acyl-CoA N-acyltransferase|Arginine-tRNA-protein transferase, C-terminal|Arginine-tRNA-protein transferase, N-terminal|Putative arginyl-tRNA--protein transferase, prokaryotic GO:0004057|GO:0016598 MF_00689|PF04376|PF04377|PIRSF037208|SSF55729 BKD09_RS24275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010432 RDD PF06271 BKD09_RS24280 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001731|IPR013785|IPR030656 Aldolase-type TIM barrel|Delta-aminolevulinic acid dehydratase|Delta-aminolevulinic acid dehydratase, active site GO:0003824|GO:0004655|GO:0033014|GO:0046872 G3DSA:3.20.20.70|PF00490|PIRSF001415|PR00144|PS00169|SM01004|SSF51569 BKD09_RS24290 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000835|IPR011991|IPR023187 MarR-type HTH domain|Transcriptional regulator MarR-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF13463|PS01117|SM00347|SSF46785 BKD09_RS24305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001085|IPR015421|IPR015422|IPR015424|IPR019798 Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Serine hydroxymethyltransferase|Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0003824|GO:0004372|GO:0006544|GO:0006563|GO:0016740|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00051|PF00464|PIRSF000412|PS00096|SSF53383 BKD09_RS24310 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003796|IPR005144 ATP-cone domain|Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 MF_00440|PF03477|TIGR00244 BKD09_RS24315 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002125|IPR002734|IPR004794|IPR011549|IPR016192|IPR016193|IPR024072 APOBEC/CMP deaminase, zinc-binding|Bacterial bifunctional deaminase-reductase, C-terminal|Cytidine and deoxycytidylate deaminases, zinc-binding|Cytidine deaminase-like|Dihydrofolate reductase-like domain|Riboflavin biosynthesis protein RibD|Riboflavin-specific deaminase, C-terminal GO:0003824|GO:0008270|GO:0008703|GO:0008835|GO:0009231|GO:0016787|GO:0050661|GO:0055114 G3DSA:3.40.140.10|G3DSA:3.40.430.10|PF00383|PF01872|PIRSF006769|PS00903|SSF53597|SSF53927|TIGR00227|TIGR00326 BKD09_RS24320 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001783|IPR017938|IPR023366|IPR026017 ATP synthase subunit alpha-like domain|Lumazine-binding domain|Lumazine-binding protein|Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 G3DSA:2.40.30.20|PF00677|PIRSF000498|SSF63380|TIGR00187 BKD09_RS24325 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 G3DSA:3.40.50.960|MF_00178|PF00885|SSF52121|TIGR00114 BKD09_RS24330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006027|IPR011605 NusB antitermination factor|NusB/RsmB/TIM44 GO:0003723|GO:0006353|GO:0006355 G3DSA:1.10.940.10|MF_00073|PF01029|SSF48013|TIGR01951 BKD09_RS24335 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006283|IPR010918|IPR016188 AIR synthase-related protein, C-terminal domain|PurM-like, N-terminal domain|Thiamine-monophosphate kinase GO:0009030|GO:0009228 G3DSA:3.30.1330.10|G3DSA:3.90.650.10|MF_02128|PF00586|PF02769|PIRSF005303|SSF55326|SSF56042|TIGR01379 BKD09_RS24345 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 MF_01129|PF03030|PIRSF001265|TIGR01104 BKD09_RS24350 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000123|IPR000477|IPR013597|IPR030931 Group II intron reverse transcriptase/maturase|Group II intron, maturase-specific|RNA-directed DNA polymerase (reverse transcriptase), msDNA|Reverse transcriptase domain GO:0003723|GO:0003964|GO:0006278 PF00078|PF08388|PR00866|SSF56672|TIGR04416 BKD09_RS24355 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 BKD09_RS24360 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007450 Lipoprotein SmpA/OmlA GO:0019867 PF04355 BKD09_RS24365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014569|IPR021150 Ubiquinol-cytochrome c chaperone, CBP3-related|Ubiquinol-cytochrome c chaperone/UPF0174 PF03981|PIRSF032079 BKD09_RS24370 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003772 Protein of unknown function DUF177 PF02620 BKD09_RS24375 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003664|IPR012281|IPR024084 Fatty acid synthesis PlsX protein|Isopropylmalate dehydrogenase-like domain|Phospholipid biosynthesis protein, PlsX-like GO:0003824|GO:0006633|GO:0016616|GO:0016747|GO:0055114 G3DSA:3.40.718.10|MF_00019|PF02504|PIRSF002465|SSF53659|TIGR00182 BKD09_RS24380 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004655|IPR013747|IPR013751|IPR016039 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III|3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal|3-oxoacyl-[acyl-carrier-protein] synthase 3|Thiolase-like GO:0003824|GO:0004315|GO:0006633|GO:0008152 G3DSA:3.40.47.10|MF_01815|PF08541|PF08545|SSF53901|TIGR00747 BKD09_RS24385 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000119|IPR005684|IPR010992|IPR020816 Histone-like DNA-binding protein|Histone-like DNA-binding protein, conserved site|Integration host factor (IHF)-like DNA-binding domain|Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 G3DSA:4.10.520.10|MF_00380|PF00216|PR01727|PS00045|SM00411|SSF47729|TIGR00987 BKD09_RS24390 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000551|IPR009061 MerR-type HTH domain|Putative DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.1660.10|PF13411|SM00422|SSF46955 BKD09_RS24400 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007936|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Virulence-associated E PF05272|SSF52540 BKD09_RS24435 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 BKD09_RS24440 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011991|IPR012318 Crp-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF13545|PR00034|SM00419|SSF46785 BKD09_RS24455 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006118|IPR006119|IPR011109 DNA-binding recombinase domain|Recombinase, conserved site|Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 G3DSA:3.40.50.1390|PF00239|PF07508|PS00397|SM00857|SSF53041 BKD09_RS24470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002925|IPR010642|IPR029058 Alpha/Beta hydrolase fold|Dienelactone hydrolase|Invasion protein B GO:0016787 G3DSA:3.40.50.1820|PF01738|PF06776|SSF53474 BKD09_RS24475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014550 Uncharacterised conserved protein UCP028704, OpgC PF10129|PIRSF028704 BKD09_RS24485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002104|IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|SSF56349 BKD09_RS24500 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR015893|IPR023772 DNA-binding HTH domain, TetR-type|DNA-binding HTH domain, TetR-type, conserved site|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|PS01081|SSF46689 BKD09_RS24505 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013094|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 G3DSA:3.40.50.1820|PF07859|SSF53474 BKD09_RS24515 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002220|IPR013785 Aldolase-type TIM barrel|DapA-like GO:0003824|GO:0008152|GO:0016829 G3DSA:3.20.20.70|PF00701|PIRSF001365|PR00146|SM01130|SSF51569 BKD09_RS24520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF00106|PR00080|PR00081|SM00822|SSF51735 BKD09_RS24525 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010520|IPR029058 Alpha/Beta hydrolase fold|UPF0255 family G3DSA:1.20.1440.110|G3DSA:3.40.50.1820|PF06500|SSF53474 BKD09_RS24530 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12802|SM00347|SSF46785 BKD09_RS24535 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003684 Porin, alpha proteobacteria type GO:0006810|GO:0015288|GO:0016020 PF02530 BKD09_RS24540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011681 GcrA cell cycle regulator PF07750 BKD09_RS24550 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004304 Acetamidase/Formamidase GO:0016811 G3DSA:2.60.120.580|G3DSA:3.10.28.20|PF03069|SSF141130 BKD09_RS24555 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003848|IPR014729 Domain of unknown function DUF218|Rossmann-like alpha/beta/alpha sandwich fold G3DSA:3.40.50.620|PF02698 BKD09_RS24560 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003748 Protein of unknown function DUF169 PF02596 BKD09_RS24565 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005097|IPR016040 NAD(P)-binding domain|Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 G3DSA:3.40.50.720|PF03435|SSF51735 BKD09_RS24570 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005097|IPR016040 NAD(P)-binding domain|Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 G3DSA:3.40.50.720|PF03435|SSF51735 BKD09_RS24575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002938|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain GO:0016491|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF01494|PR00420|SSF51905 BKD09_RS24580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|SM00347|SSF46785 BKD09_RS24590 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003362|IPR016040|IPR017473|IPR017475 Bacterial sugar transferase|Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase|NAD(P)-binding domain|Undecaprenyl-phosphate glucose phosphotransferase, WcaJ PF02397|PF13727|SSF51735|TIGR03023|TIGR03025 BKD09_RS24595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13579|SSF53756 BKD09_RS24600 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003856|IPR027417 Lipopolysaccharide biosynthesis|P-loop containing nucleoside triphosphate hydrolase GO:0009103|GO:0016020 G3DSA:3.40.50.300|PF02706|SSF52540 BKD09_RS24605 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016181 Acyl-CoA N-acyltransferase PF13480|SSF55729 BKD09_RS24610 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002509|IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF01522|SSF88713 BKD09_RS24615 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021265 Protein of unknown function DUF2842 PF11003 BKD09_RS24620 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003780|IPR023754 COX15/CtaA family|Heme A synthase, type 2 GO:0006784|GO:0016020|GO:0016021|GO:0016627|GO:0055114 MF_01665|PF02628 BKD09_RS24630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000277|IPR006235|IPR015421|IPR015422|IPR015424 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme|O-acetylhomoserine/O-acetylserine sulfhydrylase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0006520|GO:0016765|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01053|PIRSF001434|PS00868|SSF53383|TIGR01326 BKD09_RS24635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003781|IPR016040 CoA-binding|NAD(P)-binding domain GO:0048037 G3DSA:3.40.50.720|PF13380|SM00881|SSF51735 BKD09_RS24640 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001753|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|SSF52096 BKD09_RS24645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003736|IPR006683|IPR029069 HotDog domain|Phenylacetic acid degradation-related domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|SSF54637|TIGR00369 BKD09_RS24650 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005822|IPR005823 Ribosomal protein L13|Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 G3DSA:3.90.1180.10|MF_01366|PF00572|PIRSF002181|SSF52161|TIGR01066 BKD09_RS24655 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000754|IPR014721|IPR020568|IPR020574|IPR023035 Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Ribosomal protein S9|Ribosomal protein S9, bacterial/plastid|Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 G3DSA:3.30.230.10|MF_00532_B|PF00380|PS00360|SSF54211 BKD09_RS24660 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000160|IPR029787 GGDEF domain|Nucleotide cyclase G3DSA:3.30.70.270|PF00990|SM00267|SSF55073|TIGR00254 BKD09_RS24670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007138|IPR011008 Antibiotic biosynthesis monooxygenase domain|Dimeric alpha-beta barrel G3DSA:3.30.70.900|PF03992|SSF54909 BKD09_RS24675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002549 Transmembrane protein TqsA-like PF01594 BKD09_RS24685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011697|IPR029062 Class I glutamine amidotransferase-like|Peptidase C26 GO:0006541|GO:0016787 G3DSA:3.40.50.880|PF07722|SSF52317 BKD09_RS24690 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002818|IPR009057|IPR018060|IPR029062 Class I glutamine amidotransferase-like|DJ-1/PfpI|DNA binding HTH domain, AraC-type|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:3.40.50.880|PF01965|PF12833|SM00342|SSF46689|SSF52317 BKD09_RS24695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004370|IPR014347 4-oxalocrotonate tautomerase|Tautomerase/MIF superfamily GO:0006725|GO:0016853 G3DSA:3.30.429.20|PF01361|SSF55331 BKD09_RS24700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002810|IPR012340|IPR029045 ClpP/crotonase-like domain|NfeD-like, C-terminal domain|Nucleic acid-binding, OB-fold G3DSA:2.40.50.140|G3DSA:3.90.226.10|PF01957|SSF141322|SSF52096 BKD09_RS24705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001107|IPR001972 Band 7 domain|Stomatin family GO:0016020 PF01145|PR00721|SM00244|SSF117892 BKD09_RS24710 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004550|IPR006034|IPR020827|IPR027473|IPR027474|IPR027475 Asparaginase/glutaminase|Asparaginase/glutaminase, active site 1|Asparaginase/glutaminase, active site 2|L-asparaginase, C-terminal domain|L-asparaginase, N-terminal|L-asparaginase, type II GO:0004067|GO:0006520|GO:0006528 G3DSA:3.40.50.1170|G3DSA:3.40.50.40|PF00710|PIRSF001220|PIRSF500176|PR00139|PS00144|PS00917|SM00870|SSF53774|TIGR00520 BKD09_RS24715 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001637|IPR004809|IPR008146|IPR008147|IPR014746|IPR027302|IPR027303 Glutamine synthetase class-I, adenylation site|Glutamine synthetase type I|Glutamine synthetase, N-terminal conserved site|Glutamine synthetase, beta-Grasp domain|Glutamine synthetase, catalytic domain|Glutamine synthetase, glycine-rich site|Glutamine synthetase/guanido kinase, catalytic domain GO:0003824|GO:0004356|GO:0005737|GO:0006542|GO:0006807|GO:0009399 G3DSA:3.10.20.70|G3DSA:3.30.590.10|PF00120|PF03951|PS00180|PS00181|PS00182|SM01230|SSF54368|SSF55931|TIGR00653 BKD09_RS24720 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002187|IPR002332|IPR011322|IPR015867|IPR017918 Nitrogen regulatory PII-like, alpha/beta|Nitrogen regulatory protein P-II, urydylation site|Nitrogen regulatory protein PII|Nitrogen regulatory protein PII, conserved site|Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal GO:0006808|GO:0030234 G3DSA:3.30.70.120|PF00543|PIRSF039144|PR00340|PS00496|PS00638|SM00938|SSF54913 BKD09_RS24725 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000631|IPR004443|IPR017953|IPR029056|IPR030677 ATP-dependent (S)-NAD(P)H-hydrate dehydratase|Bifunctional NAD(P)H-hydrate repair enzyme Nnr|Carbohydrate kinase, predicted, conserved site|Ribokinase-like|YjeF N-terminal domain GO:0052855 G3DSA:3.40.1190.20|G3DSA:3.40.50.10260|MF_01965|MF_01966|PF01256|PF03853|PIRSF017184|PS01050|SSF53613|SSF64153|TIGR00196|TIGR00197 BKD09_RS24730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 BKD09_RS24735 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001117|IPR008972|IPR011706 Cupredoxin|Multicopper oxidase, type 1|Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 G3DSA:2.60.40.420|PF00394|PF07731|SSF49503 BKD09_RS24745 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001179|IPR005215|IPR008880|IPR008881|IPR027304 FKBP-type peptidyl-prolyl cis-trans isomerase domain|Trigger factor|Trigger factor, C-terminal|Trigger factor, ribosome-binding, bacterial|Trigger factor/SurA domain GO:0006457|GO:0015031 G3DSA:1.10.3120.10|G3DSA:3.10.50.40|G3DSA:3.30.70.1050|MF_00303|PF00254|PF05697|PF05698|PIRSF003095|SSF102735|SSF109998|SSF54534|TIGR00115 BKD09_RS24750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001907|IPR023562|IPR029045|IPR033135 ATP-dependent Clp protease proteolytic subunit|Clp protease proteolytic subunit /Translocation-enhancing protein TepA|ClpP, histidine active site|ClpP/crotonase-like domain GO:0004252|GO:0006508 G3DSA:3.90.226.10|MF_00444|PF00574|PR00127|PS00382|SSF52096 BKD09_RS24755 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003593|IPR003959|IPR004487|IPR010603|IPR019489|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|Clp ATPase, C-terminal|Clp protease, ATP-binding subunit ClpX|P-loop containing nucleoside triphosphate hydrolase|Zinc finger, ClpX C4-type GO:0005524|GO:0006457|GO:0008270|GO:0046983|GO:0051082 G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00175|PF06689|PF07724|PF10431|SM00382|SM00994|SM01086|SSF52540|SSF57716|TIGR00382 BKD09_RS24760 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003111|IPR003593|IPR003959|IPR004815|IPR008268|IPR008269|IPR014721|IPR015947|IPR020568|IPR027417|IPR027543 AAA+ ATPase domain|ATP-dependent protease La (LON), substrate-binding domain|ATPase, AAA-type, core|Lon protease, bacterial|Lon protease, bacterial/eukaryotic-type|P-loop containing nucleoside triphosphate hydrolase|PUA-like domain|Peptidase S16, Lon C-terminal|Peptidase S16, active site|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 G3DSA:1.10.8.60|G3DSA:3.30.230.10|G3DSA:3.40.50.300|MF_01973|PF00004|PF02190|PF05362|PIRSF001174|PR00830|PS01046|SM00382|SM00464|SSF52540|SSF54211|SSF88697|TIGR00763 BKD09_RS24765 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006913|IPR011057 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V|Mss4-like GO:0008152|GO:0016846 G3DSA:3.90.1590.10|PF04828|SSF51316 BKD09_RS24780 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13649|SSF53335 BKD09_RS24785 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002524|IPR027469 Cation efflux protein|Cation efflux protein transmembrane domain GO:0006812|GO:0008324|GO:0016021|GO:0055085 G3DSA:1.20.1510.10|PF01545|SSF160240|SSF161111|TIGR01297 BKD09_RS24790 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001036|IPR004763|IPR027463 Acriflavin resistance protein|Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0006812|GO:0008324|GO:0016020|GO:0016021 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|SSF82693|SSF82714|SSF82866|TIGR00914 BKD09_RS24795 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|SSF111369|TIGR01730 BKD09_RS24800 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 G3DSA:1.20.1600.10|PF02321|SSF56954 BKD09_RS24810 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002524|IPR027469 Cation efflux protein|Cation efflux protein transmembrane domain GO:0006812|GO:0008324|GO:0016021|GO:0055085 G3DSA:1.20.1510.10|PF01545|SSF161111 BKD09_RS24815 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001261|IPR002933|IPR010161|IPR011650 ArgE/DapE/ACY1/CPG2/YscS, conserved site|Peptidase M20|Peptidase M20, dimerisation domain|Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006508|GO:0006518|GO:0008152|GO:0008237|GO:0008270|GO:0016787|GO:0045148 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PIRSF037215|PS00759|SSF53187|SSF55031|TIGR01882 BKD09_RS24820 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000119|IPR010992 Histone-like DNA-binding protein|Integration host factor (IHF)-like DNA-binding domain GO:0003677 G3DSA:4.10.520.10|PF00216|PR01727|SM00411|SSF47729 BKD09_RS24835 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS24840 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015879|IPR015881|IPR017941 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site|Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain|Rieske [2Fe-2S] iron-sulphur domain GO:0005506|GO:0016491|GO:0016705|GO:0016708|GO:0019439|GO:0051537|GO:0055114 G3DSA:2.102.10.10|G3DSA:3.90.380.10|PF00355|PF00848|PS00570|SSF50022|SSF55961 BKD09_RS24845 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12802|PR00598|SM00347|SSF46785 BKD09_RS24850 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000531|IPR010105|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|SSF56935|TIGR01783 BKD09_RS24855 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005625 PepSY-associated TM protein G3DSA:1.20.950.20|PF03929 BKD09_RS24865 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000440|IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid|NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0016651|GO:0055114 MF_01394|PF00507 BKD09_RS24870 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006137|IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit|NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0008137|GO:0048038|GO:0051536|GO:0051539|GO:0055114 G3DSA:3.40.50.700|MF_01356|PF01058|PS01150|SSF56770|TIGR01957 BKD09_RS24875 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001268|IPR010218|IPR020396 NADH dehydrogenase, subunit C|NADH:ubiquinone oxidoreductase, 30kDa subunit|NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0008137|GO:0016651|GO:0055114 MF_01357|PD001581|PF00329|PS00542|SSF143243|TIGR01961 BKD09_RS24880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001135|IPR014029|IPR022885|IPR029014 NAD(P)H-quinone oxidoreductase subunit D/H|NADH-quinone oxidoreductase, subunit D|NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site|NiFe hydrogenase-like GO:0016651|GO:0048038|GO:0051287|GO:0055114 G3DSA:1.10.645.10|MF_01358|PF00346|PS00535|SSF56762|TIGR01962 BKD09_RS24885 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006342|IPR029063 Methyltransferase FkbM|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF05050|SSF53335|TIGR01444 BKD09_RS24890 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002023|IPR012336 NADH-quinone oxidoreductase subunit E-like|Thioredoxin-like fold GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF01257|PIRSF000216|PS01099|SSF52833|TIGR01958 BKD09_RS24900 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001949|IPR011537|IPR011538|IPR019554|IPR019575 NADH ubiquinone oxidoreductase, F subunit|NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain|NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain|NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site|Soluble ligand binding domain GO:0008137|GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 PF01512|PF10531|PF10589|PS00644|PS00645|SM00928|SSF140490|SSF142019|SSF142984|TIGR01959 BKD09_RS24905 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000283|IPR001041|IPR006656|IPR010228|IPR012675|IPR015405|IPR019574|IPR029035 2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|DHS-like NAD/FAD-binding domain|Molybdopterin oxidoreductase|NADH-quinone oxidoreductase, chain G, C-terminal|NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site|NADH:ubiquinone oxidoreductase, subunit G|NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0008137|GO:0009055|GO:0016020|GO:0016491|GO:0016651|GO:0042773|GO:0051536|GO:0055114 G3DSA:3.10.20.30|G3DSA:3.40.50.1220|G3DSA:3.40.50.740|PF00384|PF09326|PF10588|PF13510|PS00641|PS00642|PS00643|SM00929|SSF53706|SSF54292|SSF54862|TIGR01973 BKD09_RS24910 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001694|IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site|NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 MF_01350|PF00146|PS00668 BKD09_RS24915 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010226|IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 G3DSA:1.10.1060.10|MF_01351|PF12838|PS00198|SSF54862|TIGR01971 BKD09_RS24920 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 PF00499 BKD09_RS24925 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 MF_01456|PF00420 BKD09_RS24930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001516|IPR001750|IPR003945|IPR018393 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal|NADH-plastoquinone oxidoreductase, chain 5|NADH-plastoquinone oxidoreductase, chain 5 subgroup|NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit GO:0008137|GO:0042773|GO:0055114 PF00361|PF00662|PR01434|PR01435|TIGR01974 BKD09_RS24935 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000260|IPR001750|IPR003918|IPR010227 NADH-quinone oxidoreductase, chain M/4|NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit|NADH:ubiquinone oxidoreductase|NADH:ubiquinone oxidoreductase chain 4, N-terminal GO:0006120|GO:0008137|GO:0042773|GO:0055114 PF00361|PF01059|PR01437|TIGR01972 BKD09_RS24940 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001750|IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2|NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit GO:0008137|GO:0042773|GO:0055114 MF_00445|PF00361|TIGR01770 BKD09_RS24945 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003142|IPR004143|IPR004408|IPR008988 Biotin protein ligase, C-terminal|Biotin--acetyl-CoA-carboxylase ligase|Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain|Transcriptional repressor, C-terminal GO:0004077|GO:0006464 G3DSA:2.30.30.100|G3DSA:3.30.930.10|PF02237|PF03099|SSF50037|SSF55681|TIGR00121 BKD09_RS24950 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279|IPR004613|IPR011108 Metallo-beta-lactamase|Ribonuclease J|Zn-dependent metallo-hydrolase, RNA specificity domain GO:0003723|GO:0046872 G3DSA:3.60.15.10|PF07521|PF12706|SM00849|SSF56281|TIGR00649 BKD09_RS24955 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR017515|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Methylmalonyl-CoA epimerase G3DSA:3.10.180.10|PF13669|SSF54593|TIGR03081 BKD09_RS24960 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009935 Protein of unknown function DUF1467 PF07330 BKD09_RS24970 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002575|IPR009212|IPR011009 Aminoglycoside phosphotransferase|Methylthioribose kinase|Protein kinase-like domain GO:0009086|GO:0046522 G3DSA:3.90.1200.10|MF_01683|PF01636|PIRSF031134|SSF56112|TIGR01767 BKD09_RS24980 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|PF00496|PIRSF002741|SSF53850 BKD09_RS24985 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS24990 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS24995 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540|TIGR01727 BKD09_RS25000 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540|TIGR01727 BKD09_RS25015 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007318 Phospholipid methyltransferase PF04191 BKD09_RS25025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR011991 Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PR00039|SSF46785 BKD09_RS25030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025870|IPR029068 Glyoxalase-like domain|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase G3DSA:3.10.180.10|PF13468|SSF54593 BKD09_RS25035 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006175|IPR013813 Endoribonuclease L-PSP/chorismate mutase-like|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|SSF55298 BKD09_RS25040 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR026002 L-2-amino-thiazoline-4-carboxylic acid hydrolase PF14196 BKD09_RS25045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS25050 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS25055 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019546|IPR025997|IPR028082 Periplasmic binding protein|Periplasmic binding protein-like I|Twin-arginine translocation pathway, signal sequence, bacterial/archaeal G3DSA:3.40.50.2300|PF13407|SSF53822|TIGR01409 BKD09_RS25065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021333 Protein of unknown function DUF2946 PF11162 BKD09_RS25070 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|SSF56935 BKD09_RS25075 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011040 Sialidases G3DSA:2.120.10.10|SSF50939 BKD09_RS25080 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012336|IPR017937 Thioredoxin, conserved site|Thioredoxin-like fold GO:0045454 G3DSA:3.40.30.10|PS00194|SSF52833 BKD09_RS25085 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007410 DR1885-like metal-binding protein PF04314|SSF110087 BKD09_RS25095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012533 GLE1, N-terminal, bacteria PF07987 BKD09_RS25100 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007348|IPR008457|IPR014755|IPR014756 CopC domain|Copper resistance protein CopC/internalin, immunoglobulin-like|Copper resistance protein D|Immunoglobulin E-set GO:0005507|GO:0016021|GO:0042597|GO:0046688 G3DSA:2.60.40.1220|PF04234|PF05425|SSF81296 BKD09_RS25105 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002314|IPR002316|IPR004154|IPR004500|IPR023716 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Anticodon-binding|Proline-tRNA ligase, class IIa|Proline-tRNA ligase, class IIa, type 2|Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0000166|GO:0004812|GO:0004827|GO:0005524|GO:0005737|GO:0006418|GO:0006433 G3DSA:3.30.930.10|G3DSA:3.40.50.800|MF_01570|PF00587|PF03129|PR01046|SSF52954|SSF55681|TIGR00409 BKD09_RS25110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003838|IPR011925|IPR025857 ABC transporter permease protein domain|Lipoprotein-releasing system transmembrane protein LolC/E|MacB-like periplasmic core domain GO:0016020|GO:0016021|GO:0042953|GO:0042954 PF02687|PF12704|TIGR02212 BKD09_RS25115 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS25120 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|SM00829|SSF50129|SSF51735 BKD09_RS25125 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|G3DSA:3.30.450.20|PF13560|SM00530|SSF47413 BKD09_RS25130 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.30.70.900 BKD09_RS25135 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010621|IPR010679|IPR023289 Domain of unknown function DUF1214|Domain of unknown function DUF1254|VPA0735-like domain G3DSA:1.10.3360.10|G3DSA:2.60.120.600|G3DSA:2.60.40.1610|PF06742|PF06863|SSF160935 BKD09_RS25145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027843|IPR032710 Domain of unknown function DUF4440|NTF2-like domain G3DSA:3.10.450.50|PF14534|SSF54427 BKD09_RS25160 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 BKD09_RS25165 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001867|IPR007195|IPR011990|IPR011991|IPR016032|IPR019734 OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Tetratricopeptide repeat|Tetratricopeptide-like helical domain|TolB, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0005515|GO:0006355|GO:0015031|GO:0042597 G3DSA:1.10.10.10|G3DSA:1.25.40.10|G3DSA:3.40.50.10070|PF00486|PF04052|SM00028|SM00862|SSF46894|SSF48452 BKD09_RS25170 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029045 ClpP/crotonase-like domain G3DSA:3.90.226.10|SSF52096 BKD09_RS25175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR004839|IPR011991|IPR015421|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0003824|GO:0006355|GO:0009058|GO:0030170 G3DSA:1.10.10.10|G3DSA:3.40.640.10|PF00155|PF00392|SM00345|SSF46785|SSF53383 BKD09_RS25180 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003779|IPR004675|IPR029032 AhpD-like|Alkylhydroperoxidase AhpD core|Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 G3DSA:1.20.1290.10|PF02627|SSF69118|TIGR00778 BKD09_RS25185 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006674 HD domain G3DSA:1.10.3210.10|PF01966|SSF109604 BKD09_RS25190 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS25195 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR011990|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|Nucleotide cyclase|Tetratricopeptide-like helical domain GO:0005515|GO:0009190|GO:0016849|GO:0035556 G3DSA:1.25.40.10|G3DSA:3.30.70.1230|PF00211|SSF48452|SSF55073 BKD09_RS25205 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000326|IPR001011 Acid phosphatase, class A, bacterial|Phosphatidic acid phosphatase type 2/haloperoxidase GO:0003993|GO:0030288 G3DSA:1.20.144.10|PF01569|PR00483|SSF48317 BKD09_RS25210 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR022118 Peptidase C70, AvrRpt2 PF12385 BKD09_RS25220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021937 Protein of unknown function DUF3551 PF12071 BKD09_RS25225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021937 Protein of unknown function DUF3551 PF12071 BKD09_RS25230 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 BKD09_RS25235 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003141|IPR004013|IPR004805|IPR011708|IPR016195|IPR029460 Bacterial DNA polymerase III, alpha subunit|DNA polymerase III, alpha subunit|DNA polymerase, helix-hairpin-helix motif|PHP domain|Polymerase/histidinol phosphatase, N-terminal|Polymerase/histidinol phosphatase-like GO:0003677|GO:0003824|GO:0003887|GO:0006260|GO:0008408 G3DSA:1.10.150.280|G3DSA:3.20.20.140|PF02811|PF07733|PF14579|SM00481|SSF160975|SSF89550|TIGR00594 BKD09_RS25240 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001765|IPR015892 Carbonic anhydrase|Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 G3DSA:3.40.1050.10|PF00484|PS00704|PS00705|SM00947|SSF53056 BKD09_RS25245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029030 Caspase-like domain G3DSA:3.40.50.1460|PF00656|SSF52129 BKD09_RS25250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001865|IPR005706|IPR018130|IPR023591 Ribosomal protein S2|Ribosomal protein S2, bacteria/mitochondria/plastid|Ribosomal protein S2, conserved site|Ribosomal protein S2, flavodoxin-like domain GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015935 G3DSA:1.10.287.610|G3DSA:3.40.50.10490|MF_00291_B|PF00318|PR00395|PS00962|PS00963|SSF52313|TIGR01011 BKD09_RS25255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001816|IPR009060|IPR014039|IPR018101 Translation elongation factor EFTs/EF1B|Translation elongation factor EFTs/EF1B, dimerisation|Translation elongation factor Ts, conserved site|UBA-like GO:0003746|GO:0005515|GO:0005622|GO:0006414 G3DSA:1.10.286.20|G3DSA:1.10.8.10|G3DSA:3.30.479.20|MF_00050|PF00889|PS01127|SSF46934|SSF54713|TIGR00116 BKD09_RS25260 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001048|IPR011817|IPR015963 Aspartate/glutamate/uridylate kinase|Uridylate kinase|Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0009041|GO:0033862 G3DSA:3.40.1160.10|MF_01220_B|PF00696|PIRSF005650|SSF53633|TIGR02075 BKD09_RS25265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002661|IPR023584 Ribosome recycling factor|Ribosome recycling factor domain GO:0006412 G3DSA:1.10.132.20|MF_00040|PF01765|SSF55194|TIGR00496 BKD09_RS25270 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001441|IPR018520 Decaprenyl diphosphate synthase-like|Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 G3DSA:3.40.1180.10|MF_01139|PF01255|PS01066|SSF64005|TIGR00055 BKD09_RS25275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 PF01148|PS01315 BKD09_RS25280 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003821|IPR013512|IPR013644|IPR016040|IPR026877 1-deoxy-D-xylulose 5-phosphate reductoisomerase|1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal|1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal|DXP reductoisomerase C-terminal domain|NAD(P)-binding domain GO:0005515|GO:0008299|GO:0030604|GO:0046872|GO:0055114|GO:0070402 G3DSA:1.10.1740.10|G3DSA:3.40.50.720|MF_00183|PF02670|PF08436|PF13288|PIRSF006205|SSF51735|SSF55347|SSF69055|TIGR00243 BKD09_RS25285 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001478|IPR004387|IPR008915 PDZ domain|Peptidase M50|Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0005515|GO:0006508|GO:0016021 G3DSA:2.30.42.10|PF02163|PF13180|SM00228|SSF50156|TIGR00054 BKD09_RS25290 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000184|IPR010827|IPR023707 Bacterial surface antigen (D15)|Outer membrane protein assembly factor BamA|Surface antigen variable number GO:0019867|GO:0071709 G3DSA:2.40.160.50|MF_01430|PF01103|PF07244|PIRSF006076|TIGR03303 BKD09_RS25295 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001451|IPR007691|IPR011004|IPR018357|IPR020573 Hexapeptide repeat|Hexapeptide transferase, conserved site|Trimeric LpxA-like|UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD|UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016410|GO:0016740|GO:0016747 G3DSA:2.160.10.10|MF_00523|PF00132|PF04613|PF14602|PS00101|SSF51161|TIGR01853 BKD09_RS25300 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010084|IPR013114|IPR029069 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ|Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ|HotDog domain GO:0005737|GO:0006633|GO:0016836 G3DSA:3.10.129.10|MF_00406|PF07977|SSF54637|TIGR01750 BKD09_RS25305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025309 KTSC domain PF13619 BKD09_RS25310 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001451|IPR010137|IPR011004|IPR029098 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase|Hexapeptide repeat|Trimeric LpxA-like|Udp N-acetylglucosamine O-acyltransferase, C-terminal GO:0008610|GO:0008780 G3DSA:1.20.1180.10|G3DSA:2.160.10.10|PF00132|PF13720|PIRSF000456|SSF51161|TIGR01852 BKD09_RS25315 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010415 Protein of unknown function DUF1009 PF06230 BKD09_RS25320 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 G3DSA:3.40.50.2000|MF_00392|PF02684|SSF53756|TIGR00215 BKD09_RS25325 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SSF51735 BKD09_RS25330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR005116|IPR008995|IPR012340|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 1 GO:0005524|GO:0016887 G3DSA:2.40.50.100|G3DSA:2.40.50.140|G3DSA:3.40.50.300|PF00005|PF03459|PS00211|SM00382|SSF50331|SSF52540 BKD09_RS25335 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS25340 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS25345 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.40.190.10|PF13416|SSF53850 BKD09_RS25350 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000600|IPR011991 ROK family|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|G3DSA:3.30.420.40|PF00480|SSF46785|SSF53067 BKD09_RS25355 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006913|IPR011057 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V|Mss4-like GO:0008152|GO:0016846 G3DSA:3.90.1590.10|PF04828|SSF51316 BKD09_RS25360 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002020|IPR010953|IPR016142|IPR016143|IPR019810|IPR024176 Citrate synthase|Citrate synthase active site|Citrate synthase, bacterial-type|Citrate synthase, type I|Citrate synthase-like, large alpha subdomain|Citrate synthase-like, small alpha subdomain GO:0004108|GO:0005737|GO:0006099|GO:0046912 G3DSA:1.10.230.10|G3DSA:1.10.580.10|PF00285|PIRSF001369|PR00143|PS00480|SSF48256|TIGR01798 BKD09_RS25365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000924|IPR001412|IPR004527|IPR008925|IPR014729|IPR020058|IPR020061|IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding|Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2|Aminoacyl-tRNA synthetase, class I, conserved site|Glutamate-tRNA ligase, bacterial/mitochondrial|Glutamyl/glutaminyl-tRNA synthetase|Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain|Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain|Rossmann-like alpha/beta/alpha sandwich fold GO:0000049|GO:0000166|GO:0004812|GO:0004818|GO:0005524|GO:0005737|GO:0006418|GO:0006424|GO:0016876|GO:0043039 G3DSA:1.10.10.350|G3DSA:1.10.1160.10|G3DSA:3.40.50.620|G3DSA:3.90.800.10|MF_00022_B|PF00749|PR00987|PS00178|SSF48163|SSF52374|TIGR00464 BKD09_RS25370 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000924|IPR001412|IPR004514|IPR011035|IPR014729|IPR020056|IPR020058|IPR020059|IPR020061|IPR022861 Aminoacyl-tRNA synthetase, class I, conserved site|Glutamine-tRNA ligase, bacterial|Glutamine-tRNA synthetase|Glutamyl/glutaminyl-tRNA synthetase|Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain|Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain|Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain|Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain|Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain|Rossmann-like alpha/beta/alpha sandwich fold GO:0000166|GO:0004812|GO:0004819|GO:0005524|GO:0005737|GO:0006412|GO:0006418|GO:0006425|GO:0016876|GO:0043039 G3DSA:1.10.1160.10|G3DSA:2.40.240.10|G3DSA:3.40.50.620|G3DSA:3.90.800.10|MF_00126|PF00749|PF03950|PR00987|PS00178|SSF50715|SSF52374|TIGR00440 BKD09_RS25375 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009959|IPR032710 NTF2-like domain|Polyketide cyclase SnoaL-like domain G3DSA:3.10.450.50|PF13474|SSF54427 BKD09_RS25380 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018684 Protein of unknown function DUF2171 PF09939 BKD09_RS25385 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004477|IPR025405 ComEC/Rec2-related protein|Domain of unknown function DUF4131 PF03772|PF13567|TIGR00360 BKD09_RS25405 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006197|IPR006199|IPR006200|IPR011991|IPR015927|IPR019759|IPR028360 LexA repressor, DNA-binding domain|Peptidase S24, LexA-like|Peptidase S24/S26, beta-ribbon domain|Peptidase S24/S26A/S26B|Peptidase S24/S26A/S26B/S26C|Transcription regulator LexA|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0004252|GO:0006355|GO:0006508|GO:0009432|GO:0045892 G3DSA:1.10.10.10|G3DSA:2.10.109.10|MF_00015|PF00717|PF01726|PR00726|SSF46785|SSF51306|TIGR00498 BKD09_RS25410 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001453|IPR005110|IPR005111 MoaB/Mog domain|MoeA, C-terminal, domain IV|MoeA, N-terminal and linker domain GO:0032324 G3DSA:2.170.190.11|G3DSA:2.40.340.10|G3DSA:3.40.980.10|G3DSA:3.90.105.10|PF00994|PF03453|PF03454|SM00852|SSF53218|SSF63867|SSF63882 BKD09_RS25420 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006439|IPR023198|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain|Phosphoglycolate phosphatase, domain 2 GO:0008152|GO:0016787 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|SSF56784|TIGR01509|TIGR01549 BKD09_RS25425 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000262|IPR008259|IPR012133|IPR013785 Aldolase-type TIM barrel|Alpha-hydroxy acid dehydrogenase, FMN-dependent|FMN-dependent alpha-hydroxy acid dehydrogenase, active site|FMN-dependent dehydrogenase GO:0003824|GO:0010181|GO:0016491|GO:0055114 G3DSA:3.20.20.70|PF01070|PIRSF000138|PS00557|SSF51395 BKD09_RS25430 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001478|IPR004447|IPR005151|IPR029045 C-terminal-processing peptidase S41A|ClpP/crotonase-like domain|PDZ domain|Tail specific protease GO:0005515|GO:0006508|GO:0008236 G3DSA:2.30.42.10|G3DSA:3.30.750.44|G3DSA:3.90.226.10|PF03572|PF13180|SM00228|SM00245|SSF50156|SSF52096|TIGR00225 BKD09_RS25435 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR000160|IPR001633|IPR029787|IPR033479 Double Cache domain 1|EAL domain|GGDEF domain|Nucleotide cyclase|PAS domain G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00563|PF00990|PF02743|PF12860|SM00052|SM00267|SSF141868|SSF55073|SSF55785|TIGR00254 BKD09_RS25440 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007047 Flp/Fap pilin component PF04964 BKD09_RS25445 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS25450 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023631 Amidase signature domain G3DSA:3.90.1300.10|PF01425|SSF75304 BKD09_RS25455 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010852|IPR021005|IPR023286 ABATE domain|Putative stress-induced transcription regulator|Zinc finger, CGNR G3DSA:1.10.3300.10|PF07336|PF11706|SSF160904 BKD09_RS25460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002820|IPR023045|IPR023046 Molybdenum cofactor biosynthesis C|Molybdenum cofactor biosynthesis C, bacterial-type|Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 G3DSA:3.30.70.640|MF_01224_B|PF01967|SSF55040|TIGR00581 BKD09_RS25465 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001468|IPR011060|IPR013785|IPR013798 Aldolase-type TIM barrel|Indole-3-glycerol phosphate synthase|Indole-3-glycerol phosphate synthase, conserved site|Ribulose-phosphate binding barrel GO:0003824|GO:0004425|GO:0006568|GO:0008152 G3DSA:3.20.20.70|MF_00134_B|PF00218|PS00614|SSF51366 BKD09_RS25470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000312|IPR005940|IPR017459 Anthranilate phosphoribosyl transferase|Glycosyl transferase family 3, N-terminal domain|Glycosyl transferase, family 3 GO:0000162|GO:0004048|GO:0008152|GO:0016757 G3DSA:1.20.970.10|G3DSA:3.40.1030.10|MF_00211|PF00591|PF02885|SSF47648|SSF52418|TIGR01245 BKD09_RS25475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000297|IPR027304 Peptidyl-prolyl cis-trans isomerase, PpiC-type|Trigger factor/SurA domain GO:0016853 G3DSA:3.10.50.40|PF13145|PF13624|SSF109998|SSF54534 BKD09_RS25480 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000652|IPR013785|IPR020861|IPR022896 Aldolase-type TIM barrel|Triosephosphate isomerase|Triosephosphate isomerase, active site|Triosephosphate isomerase, bacterial/eukaryotic GO:0003824|GO:0004807|GO:0006096|GO:0008152 G3DSA:3.20.20.70|MF_00147_B|PF00121|PS00171|SSF51351|TIGR00419 BKD09_RS25485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PF03840|PR01651|TIGR00810 BKD09_RS25490 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004468|IPR017456|IPR017926|IPR027417|IPR029062 CTP synthase|CTP synthase, N-terminal|Class I glutamine amidotransferase-like|Glutamine amidotransferase|P-loop containing nucleoside triphosphate hydrolase GO:0003883|GO:0006221 G3DSA:3.40.50.300|G3DSA:3.40.50.880|MF_01227|PF00117|PF06418|SSF52317|SSF52540|TIGR00337 BKD09_RS25495 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001737|IPR029063 Ribosomal RNA adenine methyltransferase KsgA/Erm|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF00398|SSF53335 BKD09_RS25500 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF02518|PR00344|SM00387|SM00388|SSF47384|SSF55874 BKD09_RS25505 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR001867|IPR011006|IPR011991 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF52172 BKD09_RS25510 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011008|IPR012577 Dimeric alpha-beta barrel|NIPSNAP G3DSA:3.30.70.900|PF07978|SSF54909 BKD09_RS25515 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006218|IPR006269|IPR013785 3-deoxy-8-phosphooctulonate synthase|Aldolase-type TIM barrel|DAHP synthetase I/KDSA GO:0003824|GO:0005737|GO:0008152|GO:0008676|GO:0009058 G3DSA:3.20.20.70|MF_00056|PF00793|SSF51569|TIGR01362 BKD09_RS25520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS25525 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003660|IPR004089|IPR004090 Chemotaxis methyl-accepting receptor|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PR00260|SM00283|SM00304|SSF58104 BKD09_RS25530 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005000|IPR011206|IPR015813 Citrate lyase beta subunit-like|HpcH/HpaI aldolase/citrate lyase domain|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 G3DSA:3.20.20.60|PF03328|PIRSF015582|SSF51621 BKD09_RS25535 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|SSF89796 BKD09_RS25540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR008995|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF50331|SSF52540 BKD09_RS25545 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS25550 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.40.190.10|PF13416|SSF53850 BKD09_RS25555 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|SM00895|SSF46785|SSF48008 BKD09_RS25560 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.40.190.10|PF13531|SSF53850 BKD09_RS25565 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016856|IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF|NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0033739|GO:0046857|GO:0055114 G3DSA:3.30.1130.10|MF_00818|PF14489|PIRSF027377|SSF55620|TIGR03139 BKD09_RS25570 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011042|IPR011217 Six-bladed beta-propeller, TolB-like|Streptogramin lyase GO:0000287|GO:0016835|GO:0017001|GO:0046677 G3DSA:2.120.10.30|PIRSF026412|SSF63829 BKD09_RS25575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000941|IPR020809|IPR020810|IPR020811|IPR029017|IPR029065 Enolase|Enolase C-terminal domain-like|Enolase N-terminal domain-like|Enolase, C-terminal TIM barrel domain|Enolase, N-terminal|Enolase, conserved site GO:0000015|GO:0000287|GO:0004634|GO:0006096 G3DSA:3.20.20.120|G3DSA:3.30.390.10|MF_00318|PF00113|PF03952|PIRSF001400|PR00148|PS00164|SM01192|SM01193|SSF51604|SSF54826|TIGR01060 BKD09_RS25580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011032|IPR016040|IPR020843 GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0016491 G3DSA:3.40.50.720|G3DSA:3.90.180.10|SM00829|SSF50129|SSF51735 BKD09_RS25585 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279|IPR019546 Metallo-beta-lactamase|Twin-arginine translocation pathway, signal sequence, bacterial/archaeal G3DSA:3.60.15.10|PF00753|SM00849|SSF56281|TIGR01409 BKD09_RS25590 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005025|IPR029039 Flavoprotein-like domain|NADPH-dependent FMN reductase-like GO:0016491 G3DSA:3.40.50.360|PF03358|SSF52218 BKD09_RS25595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 PF04977 BKD09_RS25600 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002197|IPR003018|IPR009057|IPR029016 DNA binding HTH domain, Fis-type|GAF domain|GAF domain-like|Homeodomain-like GO:0003677|GO:0005515|GO:0043565 G3DSA:1.10.10.60|G3DSA:3.30.450.40|PF01590|PF02954|PR01590|SSF46689|SSF55781 BKD09_RS25605 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015590|IPR016160|IPR016161|IPR016162|IPR016163|IPR029510 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|PS00687|SSF53720 BKD09_RS25610 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR017946|IPR030395 Glycerophosphodiester phosphodiesterase domain|PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 G3DSA:3.20.20.190|PF03009|SSF51695 BKD09_RS25615 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001017|IPR017597|IPR029061 Dehydrogenase, E1 component|Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y|Thiamin diphosphate-binding fold GO:0004739|GO:0006086|GO:0008152|GO:0016624|GO:0043231 G3DSA:3.40.50.970|PF00676|SSF52518|TIGR03182 BKD09_RS25620 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000089|IPR003016|IPR005475|IPR009014|IPR011053|IPR029061|IPR033248 2-oxo acid dehydrogenase, lipoyl-binding site|Biotin/lipoyl attachment|Single hybrid motif|Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase, C-terminal domain|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0008152 G3DSA:2.40.50.100|G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF00364|PF02779|PF02780|PS00189|SM00861|SSF51230|SSF52518|SSF52922 BKD09_RS25625 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR031796 Protein of unknown function DUF5076 PF16826 BKD09_RS25630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002125|IPR016193 Cytidine and deoxycytidylate deaminases, zinc-binding|Cytidine deaminase-like GO:0003824|GO:0008270 G3DSA:3.40.140.10|PF00383|SSF53927 BKD09_RS25635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000089|IPR001078|IPR003016|IPR004167|IPR006257|IPR011053|IPR023213 2-oxo acid dehydrogenase, lipoyl-binding site|2-oxoacid dehydrogenase acyltransferase, catalytic domain|Biotin/lipoyl attachment|Chloramphenicol acetyltransferase-like domain|Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex|E3-binding domain|Single hybrid motif GO:0004742|GO:0006090|GO:0008152|GO:0016746|GO:0045254 G3DSA:2.40.50.100|G3DSA:3.30.559.10|G3DSA:4.10.320.10|PF00198|PF00364|PF02817|PS00189|SSF47005|SSF51230|SSF52777|TIGR01349 BKD09_RS25645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004099|IPR006258|IPR012999|IPR016156|IPR023753 Dihydrolipoamide dehydrogenase|FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, class I, active site|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0004148|GO:0016491|GO:0016668|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF02852|PF07992|PIRSF000350|PR00368|PR00411|PS00076|SSF51905|SSF55424|TIGR01350 BKD09_RS25650 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000634|IPR001926 Serine/threonine dehydratase, pyridoxal-phosphate-binding site|Tryptophan synthase beta subunit-like PLP-dependent enzyme GO:0006520|GO:0030170 G3DSA:3.40.50.1100|PF00291|PS00165|SSF53686 BKD09_RS25655 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 BKD09_RS25660 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 BKD09_RS25665 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|SM00421|SM00448|SSF46894|SSF52172 BKD09_RS25670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR001610|IPR003594|IPR003661|IPR004358|IPR013655|IPR013767 Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold|PAS fold-3|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0005515|GO:0006355|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF00989|PF02518|PF08447|PF13426|PR00344|SM00086|SM00091|SM00387|SM00388|SSF47384|SSF55785|SSF55874|TIGR00229 BKD09_RS25685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008258|IPR008939|IPR016026|IPR023346 Lysozyme-like domain|Lytic transglycosylase, superhelical U-shaped|Lytic transglycosylase, superhelical U-shaped and linker domain|Transglycosylase SLT domain 1 GO:0004553|GO:0042597 G3DSA:1.10.530.10|G3DSA:1.25.20.10|PF01464|SSF48435|SSF53955 BKD09_RS25690 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR003660|IPR011990|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|HAMP domain|Nucleotide cyclase|Tetratricopeptide-like helical domain GO:0004871|GO:0005515|GO:0007165|GO:0009190|GO:0016021|GO:0016849|GO:0035556 G3DSA:1.25.40.10|G3DSA:3.30.70.1230|PF00211|PF00672|SM00044|SM00304|SSF158472|SSF48452|SSF55073 BKD09_RS25705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011011|IPR013083 Zinc finger, FYVE/PHD-type|Zinc finger, RING/FYVE/PHD-type G3DSA:3.30.40.10|SSF57903 BKD09_RS25715 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|SSF56935 BKD09_RS25735 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012667 Cobalt transporter subunit CbtB, putative PF09489|TIGR02459 BKD09_RS25740 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012666 Cobalt transporter subunit CbtA, putative PF09490|TIGR02458 BKD09_RS25745 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000788|IPR005144|IPR008926|IPR013346|IPR013509 ATP-cone domain|Ribonucleotide reductase R1 subunit, N-terminal|Ribonucleotide reductase large subunit, C-terminal|Ribonucleotide reductase large subunit, N-terminal|Ribonucleotide reductase, class I , alpha subunit GO:0004748|GO:0005524|GO:0006260|GO:0055114 G3DSA:3.20.70.20|PF00317|PF02867|PF03477|PR01183|PS00089|SSF48168|SSF51998|TIGR02506 BKD09_RS25750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000358|IPR009078|IPR012348 Ferritin-like superfamily|Ribonucleotide reductase small subunit|Ribonucleotide reductase-related GO:0009186|GO:0016491|GO:0055114 G3DSA:1.10.620.20|PF00268|PIRSF000355|SSF47240 BKD09_RS25755 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 BKD09_RS25760 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000581|IPR004404|IPR015928|IPR020558 Aconitase/3-isopropylmalate dehydratase, swivel|Dihydroxy-acid dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0004160|GO:0008152|GO:0009082 MF_00012|PF00920|PS00886|PS00887|SSF143975|SSF52016|TIGR00110 BKD09_RS25765 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006597|IPR011990 Sel1-like repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF08238|SM00671|SSF81901 BKD09_RS25770 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004808|IPR005135|IPR020847|IPR020848 AP endonuclease 1|AP endonuclease 1, binding site|AP endonuclease 1, conserved site|Endonuclease/exonuclease/phosphatase GO:0003677|GO:0004518|GO:0004519|GO:0005622|GO:0006281 G3DSA:3.60.10.10|PF03372|PS00726|PS00728|SSF56219|TIGR00195|TIGR00633 BKD09_RS25775 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR001789|IPR003594|IPR003661|IPR004358|IPR011006|IPR013656 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PF08448|PR00344|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55785|SSF55874 BKD09_RS25790 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|SSF54593 BKD09_RS25795 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000361|IPR016092|IPR017870 FeS cluster biogenesis|FeS cluster insertion protein|FeS cluster insertion, C-terminal, conserved site GO:0005198|GO:0016226|GO:0051536 G3DSA:2.60.300.12|PF01521|PS01152|SSF89360|TIGR00049 BKD09_RS25800 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003607|IPR006261|IPR006674|IPR023023|IPR026875 Deoxyguanosinetriphosphate triphosphohydrolase|Deoxyguanosinetriphosphate triphosphohydrolase, type 2|HD domain|HD/PDEase domain|Phosphohydrolase-associated domain GO:0000287|GO:0008832|GO:0046039 G3DSA:1.10.3210.10|MF_01212|PF01966|PF13286|SM00471|SSF109604|TIGR01353 BKD09_RS25805 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001278|IPR001412|IPR005148|IPR008909|IPR009080|IPR014729 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia, anticodon-binding|Arginine-tRNA ligase|Arginyl tRNA synthetase N-terminal domain|DALR anticodon binding|Rossmann-like alpha/beta/alpha sandwich fold GO:0000166|GO:0004812|GO:0004814|GO:0005524|GO:0005737|GO:0006418|GO:0006420 G3DSA:1.10.730.10|G3DSA:3.30.1360.70|G3DSA:3.40.50.620|MF_00123|PF00750|PF03485|PF05746|PR01038|PS00178|SM00836|SM01016|SSF47323|SSF52374|SSF55190|TIGR00456 BKD09_RS25810 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007730 Sporulation-related domain GO:0042834 G3DSA:3.30.70.1070|PF05036|SSF110997 BKD09_RS25815 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001764|IPR017853 Glycoside hydrolase superfamily|Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 G3DSA:3.20.20.300|PF00933|SSF51445 BKD09_RS25820 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003768 Segregation and condensation protein A PF02616 BKD09_RS25825 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005234|IPR011991 Chromosome segregation/condensation protein ScpB|Winged helix-turn-helix DNA-binding domain GO:0051304 G3DSA:1.10.10.10|PF04079|SSF46785|TIGR00281 BKD09_RS25830 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003369|IPR006312 Sec-independent protein translocase protein TatA/B/E|Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 MF_00236|PF02416|TIGR01411 BKD09_RS25835 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003369|IPR003998|IPR018448 Sec-independent protein translocase protein TatA/B/E|Twin-arginine translocation protein TatB|Twin-arginine translocation protein TatB-like GO:0008565|GO:0009306|GO:0015031|GO:0016020|GO:0043953 MF_00237|PF02416|PR01506|TIGR01410 BKD09_RS25840 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002033|IPR019820 Sec-independent periplasmic protein translocase TatC|Sec-independent periplasmic protein translocase, conserved site GO:0016021 MF_00902|PF00902|PR01840|PS01218|TIGR00945 BKD09_RS25845 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002314|IPR002317|IPR010978|IPR015866 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Serine-tRNA ligase, type1|Serine-tRNA synthetase, type1, N-terminal|tRNA-binding arm GO:0000166|GO:0004812|GO:0004828|GO:0005524|GO:0005737|GO:0006418|GO:0006434 G3DSA:1.10.287.40|G3DSA:3.30.930.10|MF_00176|PF00587|PF02403|PIRSF001529|PR00981|SSF46589|SSF55681|TIGR00414 BKD09_RS25855 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002828|IPR030048 Survival protein SurE|Survival protein SurE-like phosphatase/nucleotidase GO:0008252|GO:0016787 G3DSA:3.40.1210.10|MF_00060|PF01975|SSF64167|TIGR00087 BKD09_RS25860 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 BKD09_RS25865 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000682|IPR020598|IPR029063 Protein-L-isoaspartate(D-aspartate) O-methyltransferase|Ribosomal RNA adenine methylase transferase, N-terminal|S-adenosyl-L-methionine-dependent methyltransferase GO:0000154|GO:0000179|GO:0004719|GO:0006464|GO:0008649 G3DSA:3.40.50.150|MF_00090|PF01135|SM00650|SSF53335|TIGR00080 BKD09_RS25870 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011055|IPR016047|IPR018392 Duplicated hybrid motif|LysM domain|Peptidase M23 G3DSA:2.70.70.10|G3DSA:3.10.350.10|PF01476|PF01551|SM00257|SSF51261|SSF54106 BKD09_RS25875 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005532|IPR016187 C-type lectin fold|Sulfatase-modifying factor enzyme G3DSA:3.90.1580.10|PF03781|SSF56436 BKD09_RS25880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000917|IPR017849|IPR017850 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Sulfatase, N-terminal GO:0003824|GO:0008152|GO:0008484 G3DSA:3.40.720.10|PF00884|PF14707|SSF53649 BKD09_RS25885 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000917|IPR017849|IPR017850 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Sulfatase, N-terminal GO:0003824|GO:0008152|GO:0008484 G3DSA:3.30.1120.10|G3DSA:3.40.720.10|PF00884|SSF53649 BKD09_RS25890 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023214 HAD-like domain G3DSA:3.40.50.1000|PF12710|SSF56784 BKD09_RS25900 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003115|IPR014956|IPR016932 ParB/Sulfiredoxin|Putative ParB-like nuclease|Uncharacterised conserved protein UCP029669 G3DSA:1.10.8.10|G3DSA:3.90.1530.10|PF08857|PIRSF029669|SSF110849 BKD09_RS25905 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000425|IPR022357|IPR023271 Aquaporin-like|Major intrinsic protein|Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 G3DSA:1.20.1080.10|PF00230|PR00783|PS00221|SSF81338 BKD09_RS25910 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 PF01914|TIGR00427 BKD09_RS25915 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 BKD09_RS25925 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025737 MetA-pathway of phenol degradation, putative PF13557 BKD09_RS25930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008533|IPR027417 Domain of unknown function DUF815|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF05673|SSF52540 BKD09_RS25935 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003849 Preprotein translocase YajC PF02699|PR01853|SM01323|TIGR00739 BKD09_RS25940 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001036|IPR005791|IPR022645|IPR022646|IPR022813 Acriflavin resistance protein|Protein translocase subunit SecD|Protein-export membrane protein SecD/SecF, archaeal and bacterial|Protein-export membrane protein SecD/SecF, bacterial|Protein-export membrane protein SecD/SecF/SecDF, conserved site GO:0005215|GO:0006810|GO:0006886|GO:0015450|GO:0016020 G3DSA:1.20.1640.10|MF_01463_B|PF02355|PF07549|PR00702|SSF82866|TIGR00916|TIGR01129 BKD09_RS25945 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005665|IPR022645|IPR022646|IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial|Protein-export membrane protein SecD/SecF, bacterial|Protein-export membrane protein SecD/SecF/SecDF, conserved site|Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 G3DSA:1.20.1640.10|MF_01464_B|PF02355|PF07549|PR01755|SSF82866|TIGR00916|TIGR00966 BKD09_RS25950 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007523 NDUFAF3/Mth938 domain-containing protein G3DSA:3.40.1230.10|PF04430|SSF64076 BKD09_RS25955 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002060|IPR008949 Isoprenoid synthase domain|Squalene/phytoene synthase GO:0009058|GO:0016740 G3DSA:1.10.600.10|PF00494|SSF48576 BKD09_RS25960 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001926|IPR002912|IPR005789 ACT domain|Threonine dehydratase, catabolic|Tryptophan synthase beta subunit-like PLP-dependent enzyme GO:0004794|GO:0006567|GO:0008152|GO:0016597 G3DSA:3.30.70.260|G3DSA:3.40.50.1100|PF00291|PF01842|SSF53686|TIGR01127 BKD09_RS25965 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000192|IPR015421|IPR015422|IPR015424|IPR020578 Aminotransferase class V domain|Aminotransferase class-V, pyridoxal-phosphate binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|PS00595|SSF53383 BKD09_RS25970 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 BKD09_RS25975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|SSF89796 BKD09_RS25980 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000891|IPR013785 Aldolase-type TIM barrel|Pyruvate carboxyltransferase GO:0003824 G3DSA:3.20.20.70|PF00682|SSF51569 BKD09_RS25985 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS25990 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009725|IPR028973|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|PhnB-like|Predicted 3-demethylubiquinone-9 3-methyltransferase G3DSA:3.10.180.10|PF06983|PIRSF021700|SSF54593 BKD09_RS25995 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014044 CAP domain G3DSA:3.40.33.10|PF00188|SSF55797 BKD09_RS26000 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011009|IPR025110 AMP-binding enzyme C-terminal domain|Protein kinase-like domain G3DSA:1.10.510.10|G3DSA:3.30.300.30|PF13193|SSF56112|SSF56801 BKD09_RS26005 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002218|IPR004417|IPR020595|IPR023753 FAD/NAD(P)-binding domain|Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO|MnmG-related, conserved site|tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0005737|GO:0008033|GO:0016491|GO:0047151|GO:0050660|GO:0055114 G3DSA:3.50.50.60|MF_01037|PF01134|PS01281|SSF51905|TIGR00137 BKD09_RS26015 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011970|IPR023346|IPR031304 Lysozyme-like domain|Lytic murein transglycosylase|Transglycosylase SLT domain 2 G3DSA:1.10.530.10|PF13406|SSF53955|TIGR02283 BKD09_RS26020 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018692 Predicted integral membrane protein DUF2189 PF09955 BKD09_RS26025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR022016 Domain of unknown function DUF3597 PF12200|SSF158634 BKD09_RS26030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016181|IPR031165 Acyl-CoA N-acyltransferase|Yjdj-type Gcn5-related N-acetyltransferase G3DSA:3.40.630.30|PF14542|SSF55729 BKD09_RS26035 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001440|IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide repeat 1|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF00515|PF13432|SM00028|SSF48452 BKD09_RS26040 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005530 SPW repeat PF03779 BKD09_RS26045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016181|IPR031165 Acyl-CoA N-acyltransferase|Yjdj-type Gcn5-related N-acetyltransferase G3DSA:3.40.630.30|PF14542|SSF55729 BKD09_RS26050 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR024289 Domain of unknown function DUF3828 PF12883 BKD09_RS26065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801 BKD09_RS26070 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005175 PPC domain G3DSA:3.30.1330.80|PF03479|SSF117856 BKD09_RS26075 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010626|IPR023157 AGR-C-984p-like domain|Protein of unknown function DUF1217 G3DSA:1.10.3700.10|PF06748|SSF158837 BKD09_RS26080 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003593|IPR003959|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF13304|PF13476|SM00382|SSF52540 BKD09_RS26085 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019587|IPR023393 Polyketide cyclase/dehydrase|START-like domain G3DSA:3.30.530.20|PF10604|SSF55961 BKD09_RS26090 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011048|IPR011964|IPR015943 Cytochrome cd1-nitrite reductase-like, haem d1 domain|WD40/YVTN repeat-like-containing domain|YVTN beta-propeller repeat GO:0005515 G3DSA:2.130.10.10|PF02239|SSF51004|TIGR02276 BKD09_RS26095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain G3DSA:3.90.245.10|PF01156|SSF53590 BKD09_RS26100 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006439|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain GO:0008152|GO:0016787 G3DSA:3.40.50.1000|PF13419|SSF56784|TIGR01549 BKD09_RS26105 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007367|IPR009057|IPR011991 Homeodomain-like|Protein of unknown function DUF433|Winged helix-turn-helix DNA-binding domain GO:0003677 G3DSA:1.10.10.10|PF04255|SSF46689 BKD09_RS26110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002782 Mut7-C RNAse domain PF01927 BKD09_RS26120 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR004602|IPR013815|IPR017871|IPR027417 ABC transporter, conserved site|ABC transporter-like|ATP-grasp fold, subdomain 1|P-loop containing nucleoside triphosphate hydrolase|UvrABC system subunit A GO:0003824|GO:0005524|GO:0006289|GO:0009380|GO:0009381|GO:0016887 G3DSA:1.10.8.280|G3DSA:1.20.1580.10|G3DSA:3.30.1490.20|G3DSA:3.40.50.300|MF_00205|PF00005|PS00211|SSF52540|TIGR00630 BKD09_RS26125 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 BKD09_RS26130 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 BKD09_RS26135 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 BKD09_RS26140 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 BKD09_RS26145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000424|IPR011344|IPR012340 Nucleic acid-binding, OB-fold|Primosome PriB/single-strand DNA-binding|Single-stranded DNA-binding protein GO:0003697|GO:0006260 G3DSA:2.40.50.140|MF_00984|PF00436|SSF50249|TIGR00621 BKD09_RS26150 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018750 Protein of unknown function DUF2306, membrane PF10067 BKD09_RS26155 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002205|IPR005743|IPR006691|IPR013757|IPR013758|IPR013760|IPR024946 Arginine repressor C-terminal-like domain|DNA gyrase, subunit A|DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel|DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta|DNA topoisomerase, type IIA, subunit A/C-terminal|DNA topoisomerase, type IIA-like domain|Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003916|GO:0003918|GO:0005524|GO:0005694|GO:0006259|GO:0006265 G3DSA:1.10.268.10|G3DSA:2.120.10.90|G3DSA:3.30.1360.40|G3DSA:3.90.199.10|MF_01897|PF00521|PF03989|SM00434|SSF101904|SSF56719|TIGR01063 BKD09_RS26165 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005625 PepSY-associated TM protein PF03929 BKD09_RS26170 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000531|IPR010105|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|SSF56935|TIGR01783 BKD09_RS26175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003855|IPR023051 Potassium transporter|Potassium uptake protein, low affinity, Kup GO:0015079|GO:0016020|GO:0071805 MF_01522|PF02705 BKD09_RS26185 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001980|IPR004821|IPR014729 Coenzyme A biosynthesis protein|Cytidyltransferase-like domain|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0004595|GO:0009058|GO:0015937 G3DSA:3.40.50.620|MF_00151|PF01467|PR01020|SSF52374|TIGR00125|TIGR01510 BKD09_RS26190 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002130|IPR020892|IPR029000 Cyclophilin-like domain|Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain|Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0000413|GO:0003755|GO:0006457 G3DSA:2.40.100.10|PF00160|PR00153|PS00170|SSF50891 BKD09_RS26195 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014587 Uncharacterised conserved protein UCP034077 PIRSF034077 BKD09_RS26200 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002130|IPR024936|IPR029000 Cyclophilin-like domain|Cyclophilin-type peptidyl-prolyl cis-trans isomerase|Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 G3DSA:2.40.100.10|PF00160|PIRSF001467|PR00153|SSF50891 BKD09_RS26205 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 G3DSA:2.40.10.240|G3DSA:3.40.1780.10|MF_00113|PF02547|SSF111337|TIGR00113 BKD09_RS26210 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000534|IPR005986|IPR012080|IPR012280|IPR016040 Aspartate-semialdehyde dehydrogenase|Aspartate-semialdehyde dehydrogenase, beta-type|NAD(P)-binding domain|Semialdehyde dehydrogenase, NAD-binding|Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0004073|GO:0005737|GO:0008652|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0016620|GO:0046983|GO:0050661|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_02121|PF01118|PF02774|PIRSF000148|SM00859|SSF51735|SSF55347|TIGR01296 BKD09_RS26215 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025711 PepSY domain PF03413 BKD09_RS26220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PF14246|PR00455|SSF46689 BKD09_RS26225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002641|IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase|Patatin/Phospholipase A2-related GO:0006629|GO:0008152 G3DSA:3.40.1090.10|PF01734|SSF52151 BKD09_RS26230 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002616|IPR004803 Queuine tRNA-ribosyltransferase|tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008033|GO:0008479|GO:0008616 G3DSA:3.20.20.105|MF_00168|PF01702|SSF51713|TIGR00430|TIGR00449 BKD09_RS26240 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001216|IPR001926|IPR005856|IPR005859 Cysteine synthase|Cysteine synthase CysK|Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site|Tryptophan synthase beta subunit-like PLP-dependent enzyme GO:0004124|GO:0006535 G3DSA:3.40.50.1100|PF00291|PS00901|SSF53686|TIGR01136|TIGR01139 BKD09_RS26245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025528 BrnA antitoxin of type II toxin-antitoxin system PF14384 BKD09_RS26250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030679 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-type amino acid transport system, ATPase component, HisP-type|P-loop containing nucleoside triphosphate hydrolase GO:0003333|GO:0005524|GO:0015424|GO:0016887 G3DSA:3.40.50.300|PF00005|PIRSF039085|PS00211|SM00382|SSF52540 BKD09_RS26255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 BKD09_RS26260 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 BKD09_RS26265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001638 Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF00497|SM00062|SSF53850 BKD09_RS26270 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006076|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01266|SSF51905|SSF54373 BKD09_RS26275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 BKD09_RS26280 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002477|IPR029030 Caspase-like domain|Peptidoglycan binding-like G3DSA:1.10.101.10|G3DSA:3.40.50.1460|PF00656|PF01471|SSF47090|SSF52129 BKD09_RS26285 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 BKD09_RS26290 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006175|IPR013813 Endoribonuclease L-PSP/chorismate mutase-like|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|SSF55298 BKD09_RS26305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 G3DSA:3.40.50.170|PF00551|SSF53328 BKD09_RS26330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR005914|IPR020845|IPR032387 AMP-binding, conserved site|AMP-dependent synthetase/ligase|Acetoacetyl-CoA synthase|Acetyl-coenzyme A synthetase, N-terminal domain GO:0003824|GO:0006629|GO:0008152|GO:0030729 G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF16177|PS00455|SSF56801|TIGR01217 BKD09_RS26340 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 BKD09_RS26345 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002549 Transmembrane protein TqsA-like PF01594 BKD09_RS26350 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000086|IPR015797 NUDIX hydrolase domain|NUDIX hydrolase domain-like GO:0016787 G3DSA:3.90.79.10|PF00293|SSF55811 BKD09_RS26415 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013781|IPR017853|IPR029044 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Nucleotide-diphospho-sugar transferases GO:0005975 G3DSA:3.20.20.80|G3DSA:3.90.550.10|PF13641|SSF51445|SSF53448 BKD09_RS26425 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013781|IPR017853 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain GO:0005975 G3DSA:3.20.20.80|SSF51445 BKD09_RS26440 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001451|IPR005882|IPR011004|IPR018357|IPR025877|IPR029044 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase|Hexapeptide repeat|Hexapeptide transferase, conserved site|MobA-like NTP transferase|Nucleotide-diphospho-sugar transferases|Trimeric LpxA-like GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0016740|GO:0019134 G3DSA:2.160.10.10|G3DSA:3.90.550.10|MF_01631|PF00132|PF12804|PS00101|SSF51161|SSF53448|TIGR01173 BKD09_RS26455 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001347|IPR005855|IPR029055 Glucosamine-fructose-6-phosphate aminotransferase, isomerising|Nucleophile aminohydrolases, N-terminal|Sugar isomerase (SIS) GO:0004360|GO:0005975|GO:0030246|GO:1901137 G3DSA:3.40.50.10490|G3DSA:3.60.20.10|MF_00164|PF01380|PF13522|SSF53697|SSF56235|TIGR01135 BKD09_RS26460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007462 Protein of unknown function DUF502 PF04367 BKD09_RS26465 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006115|IPR008927|IPR013328|IPR015814|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, NADP-binding|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain|Phosphogluconate dehydrogenase, NAD-binding, putative, C-terminal GO:0004616|GO:0016491|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF03446|PF09130|SSF48179|SSF51735 BKD09_RS26470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|SSF52540 BKD09_RS26475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003710|IPR008927|IPR013328|IPR013332|IPR013752|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|Ketopantoate reductase ApbA/PanE|Ketopantoate reductase, C-terminal domain|Ketopantoate reductase, N-terminal domain|NAD(P)-binding domain GO:0005737|GO:0008677|GO:0015940|GO:0016491|GO:0050661|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF02558|PF08546|SSF48179|SSF51735|TIGR00745 BKD09_RS26480 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001650|IPR011545|IPR012340|IPR014001|IPR027417|IPR033454 DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|RecG, wedge domain GO:0003676|GO:0005524 G3DSA:2.40.50.140|G3DSA:3.40.50.300|PF00270|PF00271|PF17191|SM00487|SM00490|SSF50249|SSF52540 BKD09_RS26485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005631 Flavinator of succinate dehydrogenase G3DSA:1.10.150.250|PF03937|SSF109910 BKD09_RS26495 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005804|IPR015876 Fatty acid desaturase domain|Fatty acid desaturase, type 1, core GO:0006629|GO:0016717|GO:0055114 PF00487|PR00075 BKD09_RS26500 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|SM00822|SSF51735 BKD09_RS26505 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000674|IPR008274|IPR012368 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding|Oxidoreductase molybdopterin-binding subunit, IorB-related GO:0016491|GO:0055114 G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF02738|PIRSF036389|SM01008|SSF56003 BKD09_RS26510 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001041|IPR002888|IPR006058|IPR012675 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|[2Fe-2S]-binding GO:0009055|GO:0016491|GO:0046872|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.150.120|G3DSA:3.10.20.30|PF00111|PF01799|PS00197|SSF47741|SSF54292 BKD09_RS26515 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS26525 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:3.40.50.980|PF00501|SSF56801 BKD09_RS26530 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|SSF53850 BKD09_RS26535 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010642 Invasion protein B PF06776 BKD09_RS26540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011722 Hemimethylated DNA-binding domain GO:0003677 PF08755|SM00992|SSF141255|TIGR02097 BKD09_RS26545 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004776 Membrane transport protein GO:0016021|GO:0055085 PF03547 BKD09_RS26550 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002938|IPR010971|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain|Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016491|GO:0016709|GO:0050660|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF01494|PR00420|SSF51905|TIGR01988 BKD09_RS26555 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR026027 Phosphatidylcholine synthase Pcs PIRSF000851 BKD09_RS26560 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005496 Integral membrane protein TerC GO:0016021 PF03741 BKD09_RS26565 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|SM00829|SSF50129|SSF51735 BKD09_RS26570 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004636|IPR005814|IPR015421|IPR015422|IPR015424 Acetylornithine/Succinylornithine transaminase family|Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0006525|GO:0008483|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01107|PF00202|PIRSF000521|PS00600|SSF53383|TIGR00707 BKD09_RS26575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13181|PF13414|PF13432|SM00028|SSF48439|SSF48452 BKD09_RS26590 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000551|IPR009061|IPR015358 MerR-type HTH domain|Putative DNA-binding domain|Transcription regulator MerR, DNA binding GO:0003677|GO:0006355 G3DSA:1.10.1660.10|PF00376|PF09278|PR00040|PS00552|SM00422|SSF46955 BKD09_RS26595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003779|IPR029032 AhpD-like|Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 G3DSA:1.20.1290.10|PF02627|SSF69118 BKD09_RS26600 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005839|IPR005840|IPR006638|IPR007197|IPR012340|IPR013848|IPR020612|IPR023404 Elongator protein 3/MiaB/NifB|Methylthiotransferase|Methylthiotransferase, N-terminal|Methylthiotransferase, conserved site|Nucleic acid-binding, OB-fold|Radical SAM|Radical SAM, alpha/beta horseshoe|Ribosomal protein S12 methylthiotransferase RimO GO:0003824|GO:0005737|GO:0009451|GO:0016740|GO:0018339|GO:0043412|GO:0051536|GO:0051539 G3DSA:2.40.50.140|G3DSA:3.80.30.20|MF_01865|PF00919|PF04055|PS01278|SM00729|SSF102114|TIGR00089|TIGR01125 BKD09_RS26605 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR005561|IPR008327|IPR011006|IPR011991 ANTAR domain|CheY-like superfamily|Signal transduction response regulator, antiterminator|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003723 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF03861|PIRSF036382|SM00448|SM01012|SSF52172 BKD09_RS26610 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.40.190.10|PF13379|SSF53850 BKD09_RS26615 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005117|IPR006066|IPR006067|IPR012798 Cobalamin (vitamin B12) biosynthesis CobG-like|Nitrite/Sulfite reductase ferredoxin-like domain|Nitrite/sulphite reductase 4Fe-4S domain|Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 G3DSA:3.30.413.10|G3DSA:3.90.480.10|PF01077|PF03460|PR00397|PS00365|SSF55124|SSF56014|TIGR02435 BKD09_RS26620 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001433|IPR001709|IPR003097|IPR007202|IPR017938|IPR023173 4Fe-4S domain|FAD-binding, type 1|Flavoprotein pyridine nucleotide cytochrome reductase|NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3|Oxidoreductase FAD/NAD(P)-binding|Riboflavin synthase-like beta-barrel GO:0016491|GO:0051536|GO:0055114 G3DSA:1.20.990.10|G3DSA:2.40.30.10|G3DSA:3.40.50.80|PF00175|PF00667|PF04060|PR00371|SSF52343|SSF63380 BKD09_RS26625 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005501|IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel|Uncharacterised protein family UPF0271, LamB/YcsF GO:0003824|GO:0005975 MF_00691|PF03746|SSF88713 BKD09_RS26630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003778|IPR029000 Carboxyltransferase domain, subdomain A and B|Cyclophilin-like domain G3DSA:2.40.100.10|PF02626|SM00797|SSF50891|TIGR00724 BKD09_RS26635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003833|IPR010016|IPR024946|IPR029000 Arginine repressor C-terminal-like domain|Carboxyltransferase domain, subdomain C and D|Cyclophilin-like domain|KipI family G3DSA:2.40.100.10|G3DSA:3.30.1360.40|PF02682|SM00796|SSF160467|SSF50891|TIGR00370 BKD09_RS26640 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein G3DSA:3.50.30.40|PF03737|SSF89562 BKD09_RS26645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 BKD09_RS26655 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR017201|IPR019223 Domain of unknown function DUF2147|Uncharacterised conserved protein UCP037429 PF09917|PIRSF037429 BKD09_RS26660 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016986|IPR029058 Alpha/Beta hydrolase fold|Uncharacterised conserved protein UCP031982, alpha/beta hydrolase, XabL G3DSA:3.40.50.1820|PIRSF031982|SSF53474 BKD09_RS26665 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001638|IPR018313 Solute-binding protein family 3/N-terminal domain of MltF|Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 G3DSA:3.40.190.10|PF00497|PS01039|SM00062|SSF53850 BKD09_RS26670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018531|IPR027369 DinB/YfiT-like putative metal-dependent hydrolase|Domain of unknown function DUF1993 G3DSA:1.20.120.450|PF09351|SSF109854 BKD09_RS26680 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006139|IPR006140|IPR016040|IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF00389|PF02826|PS00670|SSF51735|SSF52283 BKD09_RS26685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR008995|IPR012340|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:2.40.50.100|G3DSA:2.40.50.140|G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF50331|SSF52540 BKD09_RS26690 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS26695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS26700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 G3DSA:3.40.190.10|PF01547|SSF53850 BKD09_RS26705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012899 LTXXQ motif family protein GO:0042597 PF07813 BKD09_RS26710 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 BKD09_RS26725 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 G3DSA:3.40.367.20|PF02685|SSF53067|TIGR00749 BKD09_RS26730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|PF00857|SSF52499 BKD09_RS26735 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF00561|SSF53474 BKD09_RS26740 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003010|IPR003694|IPR014445|IPR014729|IPR022310 Carbon-nitrogen hydrolase|Glutamine-dependent NAD(+) synthetase|NAD(+) synthetase|NAD/GMP synthase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003952|GO:0005524|GO:0006807|GO:0009435|GO:0016810 G3DSA:3.40.50.620|G3DSA:3.60.110.10|PF00795|PF02540|PIRSF006630|SSF52402|SSF56317|TIGR00552 BKD09_RS26750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013022 Xylose isomerase-like, TIM barrel domain G3DSA:3.20.20.150|PF01261|SSF51658 BKD09_RS26755 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|SSF53850 BKD09_RS26760 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR013563|IPR027417 AAA+ ATPase domain|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|SM00382|SSF52540|TIGR01727 BKD09_RS26765 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540|TIGR01727 BKD09_RS26770 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS26775 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS26780 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000415|IPR020051|IPR029479 Nitroreductase|Nitroreductase-like|SagB-type dehydrogenase domain GO:0016491 G3DSA:3.40.109.10|PF00881|SSF55469|TIGR03605 BKD09_RS26785 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003776|IPR022291 Bacteriocin biosynthesis, cyclodehydratase domain|YcaO-like domain PF02624|TIGR00702|TIGR03882 BKD09_RS26795 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|SSF54593 BKD09_RS26800 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000581|IPR004404|IPR015928|IPR020558 Aconitase/3-isopropylmalate dehydratase, swivel|Dihydroxy-acid dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0004160|GO:0008152|GO:0009082 MF_00012|PF00920|PS00886|PS00887|SSF143975|SSF52016|TIGR00110 BKD09_RS26810 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 BKD09_RS26815 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR024501|IPR029058 Alpha/Beta hydrolase fold|Protein of unknown function DUF3141 G3DSA:3.40.50.1820|PF11339|SSF53474 BKD09_RS26820 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002505|IPR012147 Phosphate acetyl/butaryl transferase|Phosphate acetyl/butyryltransferase GO:0008152|GO:0016746 G3DSA:3.40.50.10750|PF01515|PIRSF000428|SSF53659 BKD09_RS26825 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000890|IPR004372|IPR023865 Acetate/propionate kinase|Aliphatic acid kinase, short-chain|Aliphatic acid kinase, short-chain, conserved site GO:0005622|GO:0006082|GO:0008152|GO:0016301|GO:0016310|GO:0016774 G3DSA:3.30.420.40|MF_00020|PF00871|PIRSF000722|PR00471|PS01075|PS01076|SSF53067|TIGR00016 BKD09_RS26830 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR014358|IPR016040 Enoyl-[acyl-carrier-protein] reductase (NADH)|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR GO:0004318|GO:0006633|GO:0055114 G3DSA:3.40.50.720|PF13561|PIRSF000094|PR00081|SSF51735 BKD09_RS26835 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002539|IPR029069 HotDog domain|MaoC-like domain G3DSA:3.10.129.10|PF01575|SSF54637 BKD09_RS26840 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004164|IPR004165|IPR012791 3-oxoacid CoA-transferase, subunit B|Coenzyme A transferase active site|Coenzyme A transferase family I GO:0008152|GO:0008410 G3DSA:3.40.810.20|PF01144|PS01274|SM00882|SSF100950|TIGR02428 BKD09_RS26845 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004165|IPR012792 3-oxoacid CoA-transferase, subunit A|Coenzyme A transferase family I GO:0008152|GO:0008410 G3DSA:3.40.1080.10|PF01144|SM00882|SSF100950|TIGR02429 BKD09_RS26855 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR022742|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Serine aminopeptidase, S33 G3DSA:3.40.50.1820|PF12146|PR00111|SSF53474 BKD09_RS26860 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR000639|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Epoxide hydrolase-like GO:0003824 G3DSA:3.40.50.1820|PF00561|PR00412|SSF53474 BKD09_RS26865 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF00561|SSF53474 BKD09_RS26870 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010234|IPR018968 Phasin|Phasin, subfamily 2 PF09361|TIGR01985 BKD09_RS26875 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 PF01914|TIGR00427 BKD09_RS26880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF13738|SSF51905 BKD09_RS26890 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR001660|IPR011990|IPR013761|IPR019734|IPR027417|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|Nucleotide cyclase|P-loop containing nucleoside triphosphate hydrolase|Sterile alpha motif domain|Sterile alpha motif/pointed domain|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515|GO:0009190|GO:0016849|GO:0035556 G3DSA:1.10.150.50|G3DSA:1.25.40.10|G3DSA:3.30.70.1230|G3DSA:3.40.50.300|PF00211|PF00536|PF13191|PF13424|SM00028|SM00044|SM00454|SSF47769|SSF48452|SSF52540|SSF55073 BKD09_RS26895 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021937 Protein of unknown function DUF3551 PF12071 BKD09_RS26915 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002227|IPR008922 Tyrosinase copper-binding domain|Uncharacterised domain, di-copper centre GO:0008152|GO:0016491 G3DSA:1.10.1280.10|PF00264|PR00092|PS00497|PS00498|SSF48056 BKD09_RS26930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006905|IPR023753 FAD/NAD(P)-binding domain|Tryptophan halogenase GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF04820|SSF51905 BKD09_RS26935 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002355|IPR008972|IPR011706|IPR011707|IPR033138 Cupredoxin|Multicopper oxidase, copper-binding site|Multicopper oxidase, type 2|Multicopper oxidase, type 3|Multicopper oxidases, conserved site GO:0005507|GO:0016491|GO:0055114 G3DSA:2.60.40.420|PF07731|PF07732|PS00079|PS00080|SSF49503 BKD09_RS26940 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002818|IPR029062 Class I glutamine amidotransferase-like|DJ-1/PfpI G3DSA:3.40.50.880|PF01965|SSF52317 BKD09_RS26955 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001906|IPR009945 Protein of unknown function DUF1476|Terpene synthase, N-terminal domain GO:0008152|GO:0010333|GO:0016829 G3DSA:1.50.30.10|PF07345|PIRSF031780 BKD09_RS26960 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005134|IPR020761|IPR020765 Uncharacterised protein family UPF0114|Uncharacterised protein family UPF0114, bacteria|Uncharacterised protein family UPF0114, gammaproteobacteria GO:0005886 MF_00143|PF03350|TIGR00645 BKD09_RS26970 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009009|IPR012997 Rare lipoprotein A|RlpA-like protein, double-psi beta-barrel domain PF03330|SSF50685|TIGR00413 BKD09_RS26975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002909|IPR005546|IPR006626|IPR013783|IPR014756 Autotransporter beta-domain|IPT domain|Immunoglobulin E-set|Immunoglobulin-like fold|Parallel beta-helix repeat GO:0005515 G3DSA:2.40.128.130|G3DSA:2.60.40.10|PF01833|SM00429|SM00710|SM00869|SSF103515|SSF81296 BKD09_RS26980 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011083 Phage tail collar domain G3DSA:3.90.1340.10|PF07484|SSF88874 BKD09_RS26985 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011083 Phage tail collar domain G3DSA:3.90.1340.10|PF07484|SSF88874 BKD09_RS26990 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011083 Phage tail collar domain G3DSA:3.90.1340.10|PF07484|SSF88874 BKD09_RS26995 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 BKD09_RS27000 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR000639|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Epoxide hydrolase-like GO:0003824 G3DSA:3.40.50.1820|PF00561|PR00412|SSF53474 BKD09_RS27005 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001967|IPR012338|IPR012907|IPR015956|IPR018044 Beta-lactamase/transpeptidase-like|Penicillin-binding protein-associated|Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0004180|GO:0006508|GO:0009002 G3DSA:2.60.410.10|G3DSA:3.40.710.10|PF00768|PF07943|PR00725|SM00936|SSF56601|SSF69189 BKD09_RS27010 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018094|IPR018095|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Thymidylate kinase|Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 G3DSA:3.40.50.300|MF_00165|PF02223|PS01331|SSF52540|TIGR00041 BKD09_RS27015 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF13177|SSF52540 BKD09_RS27020 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001412|IPR009080|IPR014729|IPR014758|IPR015413|IPR023457 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia, anticodon-binding|Methionine-tRNA synthetase, type 2|Methionyl-tRNA synthetase|Methionyl/Leucyl tRNA synthetase|Rossmann-like alpha/beta/alpha sandwich fold GO:0000166|GO:0004812|GO:0004825|GO:0005524|GO:0005737|GO:0006418|GO:0006431 G3DSA:1.10.730.10|G3DSA:2.170.220.10|G3DSA:3.40.50.620|MF_01228|PF09334|PR01041|PS00178|SSF47323|SSF52374|TIGR00398 BKD09_RS27025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001130|IPR015991|IPR018228|IPR032466 Deoxyribonuclease, TatD-related, conserved site|Metal-dependent hydrolase|TatD family|Uncharacterised hydrolase TatD-type GO:0004536|GO:0016788|GO:0016888 G3DSA:3.20.20.140|PF01026|PIRSF005902|PS01090|PS01091|PS01137|SSF51556|TIGR00010 BKD09_RS27030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF12706|SSF56281 BKD09_RS27035 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801 BKD09_RS27040 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004681|IPR007387|IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein|Tripartite ATP-independent periplasmic transporter, DctQ component GO:0016021 PF04290|PF06808|TIGR00786 BKD09_RS27045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004682|IPR018389|IPR019546 TRAP transporter solute receptor DctP/TeaA|TRAP transporter solute receptor, DctP family|Twin-arginine translocation pathway, signal sequence, bacterial/archaeal GO:0006810|GO:0030288 PF03480|PIRSF006470|TIGR00787|TIGR01409 BKD09_RS27050 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029035 DHS-like NAD/FAD-binding domain G3DSA:3.40.50.1220|SSF52467 BKD09_RS27060 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 PF04471 BKD09_RS27065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001525|IPR029063 C-5 cytosine methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase GO:0008168 G3DSA:3.40.50.150|G3DSA:3.90.120.10|PF00145|PR00105|SSF53335 BKD09_RS27070 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004603|IPR011335 DNA mismatch endonuclease vsr|Restriction endonuclease type II-like GO:0004519|GO:0006298 G3DSA:3.40.960.10|PF03852|SSF52980|TIGR00632 BKD09_RS27075 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018973 DEAD/DEAH-box helicase, putative PF09369 BKD09_RS27080 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001650|IPR027417 Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF00271|SM00490|SSF52540 BKD09_RS27085 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011528|IPR027417|IPR027785 Nuclease-related domain, NERD|P-loop containing nucleoside triphosphate hydrolase|UvrD-like helicase C-terminal domain G3DSA:3.40.50.300|PF08378|PF13538|PF13604|SSF52540 BKD09_RS27115 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019219 Protein of unknown function DUF2130 PD936484|PF09903 BKD09_RS27125 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR020232 Uncharacterised protein family, Y4jG, transmembrane PD095314|SSF102712 BKD09_RS27140 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010359|IPR014016|IPR014017|IPR027417 HTH domain, IrrE-type|P-loop containing nucleoside triphosphate hydrolase|UvrD-like DNA helicase, C-terminal|UvrD-like Helicase, ATP-binding domain GO:0005524|GO:0016787 G3DSA:1.10.486.10|G3DSA:3.40.50.300|PF00580|PF06114|PF12705|PF13361|SSF52540 BKD09_RS27150 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011991|IPR013324 RNA polymerase sigma factor, region 3/4|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|SSF88659 BKD09_RS27165 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009939 Fungal chitosanase PF07335 BKD09_RS27170 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011055|IPR016047 Duplicated hybrid motif|Peptidase M23 G3DSA:2.70.70.10|PF01551|SSF51261 BKD09_RS27185 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002477|IPR013781|IPR015020|IPR017853 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Peptidoglycan binding-like|Protein of unknown function DUF1906 GO:0005975 G3DSA:1.10.101.10|G3DSA:3.20.20.80|PF08924|SSF47090|SSF51445 BKD09_RS27190 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR022060 Protein of unknown function DUF3616 PF12275 BKD09_RS27215 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000642|IPR003593|IPR003959|IPR025662|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase|Peptidase M41|Sigma-54 interaction domain, ATP-binding site 1 GO:0004222|GO:0005524|GO:0006508 G3DSA:3.40.50.300|PF00004|PF01434|PS00675|SM00382|SSF140990|SSF52540 BKD09_RS27220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002104|IPR004107|IPR011010|IPR013762|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, SAM-like, N-terminal|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PF02899|SSF56349 BKD09_RS27225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002104|IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|SSF56349 BKD09_RS27240 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008868|IPR027417 Bacterial TniB|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF05621|SSF52540 BKD09_RS27250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|SSF56349 BKD09_RS27255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032345 Protein of unknown function DUF4863 PF16155 BKD09_RS27260 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000415|IPR029479 Nitroreductase|Nitroreductase-like GO:0016491 G3DSA:3.40.109.10|PF00881|SSF55469 BKD09_RS27265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS27270 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 BKD09_RS27275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000587|IPR000994|IPR028980|IPR029149 Creatinase, N-terminal|Creatinase/Aminopeptidase P, N-terminal|Creatinase/Aminopeptidase P/Spt16, N-terminal|Peptidase M24, structural domain GO:0016787 G3DSA:3.40.350.10|G3DSA:3.90.230.10|PF00557|PF01321|SSF53092|SSF55920 BKD09_RS27280 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 BKD09_RS27285 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|PF00857|SSF52499 BKD09_RS27290 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003829|IPR008778|IPR011051|IPR012093|IPR014710 Pirin|Pirin, C-terminal domain|Pirin, N-terminal domain|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF02678|PF05726|PIRSF006232|SSF51182 BKD09_RS27300 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 PF06689|SM00994|SSF57716 BKD09_RS27305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005625 PepSY-associated TM protein PF03929 BKD09_RS27310 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011008 Dimeric alpha-beta barrel SSF54909 BKD09_RS27320 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000269|IPR015798|IPR015800|IPR015802|IPR016182 Copper amine oxidase|Copper amine oxidase, C-terminal|Copper amine oxidase, N-terminal|Copper amine oxidase, N2-terminal|Copper amine oxidase, N3-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 G3DSA:2.70.98.20|G3DSA:3.10.450.40|PF01179|PF02727|PF02728|PS01164|SSF49998|SSF54416 BKD09_RS27325 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001466|IPR012338 Beta-lactamase-related|Beta-lactamase/transpeptidase-like G3DSA:3.40.710.10|PF00144|SSF56601 BKD09_RS27330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003313|IPR009057|IPR018060|IPR018062 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PF14525|PS00041|SM00342|SSF46689 BKD09_RS27335 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004872 Lipoprotein NlpA family G3DSA:3.40.190.10|PF03180|PIRSF002854|SSF53850|TIGR00363 BKD09_RS27340 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS27345 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR018449|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|NIL domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.30.70.260|G3DSA:3.40.50.300|PF00005|PF09383|PS00211|SM00382|SM00930|SSF52540|SSF55021 BKD09_RS27350 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001898|IPR030676 Citrate carrier CitT-related|Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 PF00939|PIRSF002457|TIGR00785 BKD09_RS27355 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001753|IPR014748|IPR029045 ClpP/crotonase-like domain|Crontonase, C-terminal|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:1.10.12.10|G3DSA:3.90.226.10|PF00378|SSF52096 BKD09_RS27360 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004232|IPR018141|IPR023900 Nitrile hydratase alpha /Thiocyanate hydrolase gamma|Nitrile hydratase alpha subunit /Thiocyanate hydrolase gamma subunit|Nitrile hydratase, alpha subunit GO:0003824|GO:0006807|GO:0018822|GO:0046914 G3DSA:3.90.330.10|PD007559|PF02979|PIRSF001426|SSF56209|TIGR01323 BKD09_RS27365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003168|IPR008990|IPR024690 Electron transport accessory protein-like domain|Nitrile hydratase beta subunit domain|Nitrile hydratase, beta subunit GO:0006807|GO:0018822|GO:0046914 G3DSA:1.10.472.20|G3DSA:2.30.30.50|PF02211|PIRSF001427|SSF50090|TIGR03888 BKD09_RS27370 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008990|IPR023808|IPR024690 Electron transport accessory protein-like domain|Nitrile hydratase accessory protein, putative|Nitrile hydratase beta subunit domain GO:0018822 G3DSA:1.10.472.20|PF02211|SSF50090|TIGR03889 BKD09_RS27375 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014729|IPR018317 Queuosine biosynthesis protein QueC|Rossmann-like alpha/beta/alpha sandwich fold G3DSA:3.40.50.620|MF_01633|PF06508|PIRSF006293|SSF52402|TIGR00364 BKD09_RS27380 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004518|IPR011551 NTP pyrophosphohydrolase MazG|NTP pyrophosphohydrolase MazG, putative catalytic core G3DSA:1.10.287.1080|PF03819|SSF101386|TIGR00444 BKD09_RS27385 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001322|IPR019268 Lamin Tail Domain|Protein of unknown function DUF2278 PF00932|PF10042|SSF74853 BKD09_RS27390 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006073|IPR016496|IPR025121|IPR027417|IPR032305 GTP binding domain|GTP-binding protein, middle domain|GTPase HflX|GTPase HflX, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005525 G3DSA:3.40.50.300|MF_00900|PF01926|PF13167|PF16360|PIRSF006809|PR00326|SSF52540|TIGR03156 BKD09_RS27395 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005001|IPR010920 LSM domain|RNA-binding protein Hfq GO:0003723|GO:0006355 G3DSA:2.30.30.100|MF_00436|SSF50182|TIGR02383 BKD09_RS27400 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR011006|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PS00676|PS00688|SM00382|SM00448|SSF46689|SSF52172|SSF52540 BKD09_RS27405 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR003594|IPR003660|IPR003661|IPR004358|IPR013767|IPR017232 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, nitrogen fixation and metabolism regulator|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0004871|GO:0006355|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF00672|PF00989|PF02518|PIRSF037532|PR00344|SM00091|SM00304|SM00387|SM00388|SSF158472|SSF47384|SSF55785|SSF55874|TIGR00229 BKD09_RS27415 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR010114|IPR011006|IPR025662|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, nitrogen regulation NR(I)|Signal transduction response regulator, receiver domain GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0006808|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PR01590|PS00675|PS00676|PS00688|SM00382|SM00448|SSF46689|SSF52172|SSF52540|TIGR01818 BKD09_RS27420 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR003594|IPR003661|IPR004358|IPR013767 Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0006355|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF00989|PF02518|PR00344|SM00091|SM00387|SM00388|SSF47384|SSF55785|SSF55874 BKD09_RS27425 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001269|IPR004652|IPR013785|IPR018517 Aldolase-type TIM barrel|tRNA-dihydrouridine synthase|tRNA-dihydrouridine synthase, TIM-barrel, NifR3|tRNA-dihydrouridine synthase, conserved site GO:0003824|GO:0008033|GO:0016491|GO:0017150|GO:0050660|GO:0055114 G3DSA:3.20.20.70|PF01207|PIRSF006621|PS01136|SSF51395|TIGR00737 BKD09_RS27430 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001228|IPR003526|IPR018294|IPR020555|IPR026596|IPR029044 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase|2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site|2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase|4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site|Bifunctional enzyme IspD/IspF|Nucleotide-diphospho-sugar transferases GO:0003824|GO:0008299|GO:0008685|GO:0016114|GO:0050518 G3DSA:3.30.1330.50|G3DSA:3.90.550.10|MF_00107|MF_00108|MF_01520|PF01128|PF02542|PS01295|PS01350|SSF53448|SSF69765|TIGR00151|TIGR00453 BKD09_RS27435 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008136 CinA, C-terminal G3DSA:3.90.950.20|PF02464|SSF142433|TIGR00199 BKD09_RS27445 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009056|IPR024167 Cytochrome c-like domain|Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 G3DSA:1.10.760.10|PF00034|PIRSF000005|SSF46626 BKD09_RS27450 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008168|IPR009056|IPR014353 Cytochrome c, class IC|Cytochrome c-like domain|Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0009055|GO:0016020|GO:0016614|GO:0020037 G3DSA:1.10.760.10|PF00034|PIRSF000018|PR00605|SSF46626 BKD09_RS27460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001505|IPR002429|IPR008972 Copper centre Cu(A)|Cupredoxin|Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 G3DSA:2.60.40.420|PF00116|PS00078|SSF49503 BKD09_RS27465 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000883|IPR023616 Cytochrome c oxidase subunit I|Cytochrome c oxidase, subunit I domain GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 G3DSA:1.20.210.10|PF00115|PR01165|SSF81442 BKD09_RS27470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009056|IPR024167 Cytochrome c-like domain|Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 G3DSA:1.10.760.10|PF00034|PF13442|PIRSF000005|SSF46626 BKD09_RS27475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005031|IPR023393 Coenzyme Q-binding protein COQ10, START domain|START-like domain G3DSA:3.30.530.20|PF03364|SSF55961 BKD09_RS27480 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003698|IPR006638|IPR007197|IPR013785 Aldolase-type TIM barrel|Elongator protein 3/MiaB/NifB|Lipoyl synthase|Radical SAM GO:0003824|GO:0009107|GO:0016992|GO:0051536|GO:0051539 G3DSA:3.20.20.70|MF_00206|PF04055|PIRSF005963|SM00729|SSF102114|TIGR00510 BKD09_RS27485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003180|IPR011034 Formyl transferase, C-terminal-like|Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003824|GO:0003905|GO:0006284 G3DSA:3.10.300.10|MF_00527|PF02245|SSF50486|TIGR00567 BKD09_RS27490 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001412|IPR002300|IPR002303|IPR009008|IPR009080|IPR010978|IPR013155|IPR014729|IPR019499 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia|Aminoacyl-tRNA synthetase, class Ia, anticodon-binding|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold|Valine-tRNA ligase|Valyl-tRNA synthetase, tRNA-binding arm|Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain|tRNA-binding arm GO:0000166|GO:0002161|GO:0004812|GO:0004832|GO:0005524|GO:0005737|GO:0006418|GO:0006438 G3DSA:1.10.287.380|G3DSA:1.10.730.10|G3DSA:3.40.50.620|G3DSA:3.90.740.10|MF_02004|PF00133|PF08264|PF10458|PR00986|PS00178|SSF46589|SSF47323|SSF50677|SSF52374|TIGR00422 BKD09_RS27495 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019632 Protein of unknown function DUF2497 PF10691 BKD09_RS27500 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003423|IPR010130 Outer membrane efflux protein|Type I secretion outer membrane protein, TolC GO:0005215|GO:0006810|GO:0019867 G3DSA:1.20.1600.10|PF02321|SSF56954|TIGR01844 BKD09_RS27505 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF01135|SSF53335 BKD09_RS27515 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015168 SsuA/THI5-like G3DSA:3.40.190.10|PF09084|SSF53850 BKD09_RS27520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR029151|IPR029787|IPR033479 Adenylyl cyclase class-3/4/guanylyl cyclase|Double Cache domain 1|Nucleotide cyclase|Periplasmic sensor domain-like GO:0009190|GO:0016849|GO:0035556 G3DSA:3.30.450.20|G3DSA:3.30.70.1230|PF00211|PF02743|SM00044|SSF103190|SSF55073 BKD09_RS27525 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025737 MetA-pathway of phenol degradation, putative PF13557 BKD09_RS27530 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010621|IPR010679|IPR023289 Domain of unknown function DUF1214|Domain of unknown function DUF1254|VPA0735-like domain G3DSA:1.10.3360.10|G3DSA:2.60.120.600|G3DSA:2.60.40.1610|PF06742|PF06863|SSF160935 BKD09_RS27535 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010621|IPR010679 Domain of unknown function DUF1214|Domain of unknown function DUF1254 G3DSA:2.60.120.600|G3DSA:2.60.40.1610|PF06742|PF06863|SSF160935 BKD09_RS27540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|SSF111369|TIGR01730 BKD09_RS27545 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011223 Uncharacterised conserved protein UCP028770 PF11742|PIRSF028770 BKD09_RS27555 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000917|IPR017849|IPR017850 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Sulfatase, N-terminal GO:0003824|GO:0008152|GO:0008484 G3DSA:3.30.1120.10|G3DSA:3.40.720.10|PF00884|SSF53649 BKD09_RS27560 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025738 Aerotolerance-related protein BatD PF13584 BKD09_RS27565 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002035|IPR011990 Tetratricopeptide-like helical domain|von Willebrand factor, type A GO:0005515 G3DSA:1.25.40.10|G3DSA:3.40.50.410|PF13519|SSF48452|SSF53300 BKD09_RS27570 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002035 von Willebrand factor, type A G3DSA:3.40.50.410|PF00092|SM00327|SSF53300 BKD09_RS27575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025489 Protein of unknown function (DUF4381 PF14316 BKD09_RS27580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002035|IPR002881 Domain of unknown function DUF58|von Willebrand factor, type A PF01882|SSF53300 BKD09_RS27585 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011703|IPR016366|IPR027417 ATPase chaperone, AAA-type, MoxR, predicted|ATPase, AAA-3|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:1.10.8.300|G3DSA:3.40.50.300|PF07726|PIRSF002849|SSF52540 BKD09_RS27590 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000917|IPR017849|IPR017850 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Sulfatase, N-terminal GO:0003824|GO:0008152|GO:0008484 G3DSA:3.30.1120.10|G3DSA:3.40.720.10|PF00884|SSF53649 BKD09_RS27595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005532|IPR016187 C-type lectin fold|Sulfatase-modifying factor enzyme G3DSA:3.90.1580.10|PF03781|SSF56436 BKD09_RS27600 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR018060 DNA binding HTH domain, AraC-type|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|SM00342|SSF46689 BKD09_RS27620 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001107|IPR031905 Band 7 domain|Flotillin, C-terminal domain PF01145|PF15975|SM00244|SSF117892 BKD09_RS27625 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010840 Protein of unknown function DUF1449 PF07290 BKD09_RS27630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007157 PspA/IM30 PF04012 BKD09_RS27635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006175|IPR013813 Endoribonuclease L-PSP/chorismate mutase-like|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|SSF55298 BKD09_RS27640 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003313|IPR004304|IPR009057|IPR018060|IPR020449 Acetamidase/Formamidase|AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|Homeodomain-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0016811|GO:0043565 G3DSA:1.10.10.60|G3DSA:2.60.120.580|G3DSA:3.10.28.20|PF03069|PF12833|PF14525|PR00032|SM00342|SSF141130|SSF46689 BKD09_RS27645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004304 Acetamidase/Formamidase GO:0016811 G3DSA:2.60.120.580|G3DSA:3.10.28.20|PF03069|SSF141130 BKD09_RS27650 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR003439|IPR003593|IPR010065|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain MetI-like|ABC transporter, conserved site|ABC transporter-like|Amino acid ABC transporter, permease protein, 3-TM domain|P-loop containing nucleoside triphosphate hydrolase GO:0005215|GO:0005524|GO:0006810|GO:0016020|GO:0016021|GO:0016887 G3DSA:1.10.3720.10|G3DSA:3.40.50.300|PF00005|PF00528|PS00211|SM00382|SSF161098|SSF52540|TIGR01726 BKD09_RS27655 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001638|IPR018313 Solute-binding protein family 3/N-terminal domain of MltF|Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 G3DSA:3.40.190.10|PF00497|PS01039|SM00062|SSF53850 BKD09_RS27670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|SM00382|SSF52540 BKD09_RS27675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013525 ABC-2 type transporter GO:0016020 PF01061 BKD09_RS27680 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005636 DTW PF03942|SM01144 BKD09_RS27685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|SSF53335 BKD09_RS27690 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|SSF82693|SSF82714|SSF82866 BKD09_RS27695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|G3DSA:3.30.70.1440|PF00873|PR00702|SSF82693|SSF82714|SSF82866 BKD09_RS27700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|SSF111369|TIGR01730 BKD09_RS27705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003423|IPR010131 Outer membrane efflux protein|RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 G3DSA:1.20.1600.10|PF02321|SSF56954|TIGR01845 BKD09_RS27710 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003333|IPR029063 Mycolic acid cyclopropane synthase|S-adenosyl-L-methionine-dependent methyltransferase GO:0008610 G3DSA:3.40.50.150|PF02353|PIRSF003085|SSF53335 BKD09_RS27715 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001216|IPR001926 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site|Tryptophan synthase beta subunit-like PLP-dependent enzyme GO:0006535 G3DSA:3.40.50.1100|PF00291|PS00901|SSF53686 BKD09_RS27720 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030679 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-type amino acid transport system, ATPase component, HisP-type|P-loop containing nucleoside triphosphate hydrolase GO:0003333|GO:0005524|GO:0015424|GO:0016887 G3DSA:3.40.50.300|PF00005|PIRSF039085|PS00211|SM00382|SSF52540 BKD09_RS27725 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 BKD09_RS27730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 BKD09_RS27735 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001638 Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF00497|SM00062|SSF53850 BKD09_RS27740 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000277|IPR006233|IPR015421|IPR015422|IPR015424 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme|Cystathionine beta-lyase, bacterial|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0004121|GO:0005737|GO:0006520|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01053|PIRSF001434|PS00868|SSF53383|TIGR01324 BKD09_RS27745 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003841|IPR004633|IPR026022 Na/Pi-cotransporter II-related/YqeW-like protein|PhoU domain|Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 G3DSA:1.20.58.220|PF01895|PF02690|SSF109755|TIGR00704 BKD09_RS27750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011499|IPR014546 Lipid A biosynthesis|Uncharacterised conserved protein, lipid A biosynthesis GO:0008915|GO:0009245 PD339292|PF07578|PIRSF028440|SM01259 BKD09_RS27755 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|SSF53448 BKD09_RS27760 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase G3DSA:1.20.144.10|PF01569|SM00014|SSF48317 BKD09_RS27765 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 PF02366 BKD09_RS27770 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001264|IPR001460|IPR009647|IPR011815|IPR012338|IPR023346 Beta-lactamase/transpeptidase-like|Glycosyl transferase, family 51|Lysozyme-like domain|Penicillin-binding protein 1C|Penicillin-binding protein, transpeptidase|Penicillin-binding, C-terminal GO:0008658|GO:0008955|GO:0009252 G3DSA:1.10.3810.10|G3DSA:3.40.710.10|PF00905|PF00912|PF06832|SSF53955|SSF56601|TIGR02073 BKD09_RS27775 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001599|IPR002890|IPR008930|IPR011625|IPR021868|IPR026284 Alpha-2-macroglobulin|Alpha-2-macroglobulin MG1 domain|Alpha-2-macroglobulin domain protein, bacteria|Alpha-2-macroglobulin, N-terminal|Alpha-2-macroglobulin, N-terminal 2|Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid GO:0004866 G3DSA:1.50.10.20|PF00207|PF01835|PF07703|PF11974|PIRSF038980|SM01359|SM01360|SSF48239 BKD09_RS27820 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014299 Pentapeptide MXKDX repeat protein TIGR02953 BKD09_RS27825 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PF03480 BKD09_RS27830 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290 BKD09_RS27835 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004681|IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein GO:0016021 PF06808|PIRSF006066|TIGR00786 BKD09_RS27840 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|SM00345|SM00895|SSF46785|SSF48008 BKD09_RS27845 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290 BKD09_RS27850 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004681|IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein GO:0016021 PF06808|PIRSF006066|TIGR00786 BKD09_RS27855 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PF03480 BKD09_RS27860 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002220|IPR013785 Aldolase-type TIM barrel|DapA-like GO:0003824|GO:0008152|GO:0016829 G3DSA:3.20.20.70|PF00701|PIRSF001365|PR00146|SM01130|SSF51569 BKD09_RS27865 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000891|IPR013785 Aldolase-type TIM barrel|Pyruvate carboxyltransferase GO:0003824 G3DSA:3.20.20.70|PF00682|SSF51569 BKD09_RS27870 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000089|IPR005479|IPR005481|IPR005482|IPR011053|IPR011054|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Biotin carboxylase, C-terminal|Biotin carboxylase-like, N-terminal domain|Biotin/lipoyl attachment|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain|Pre-ATP-grasp domain|Rudiment single hybrid motif|Single hybrid motif GO:0003824|GO:0005524 G3DSA:2.40.50.100|G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|PF00289|PF00364|PF02785|PF02786|PS00866|PS00867|SM00878|SSF51230|SSF51246|SSF52440|SSF56059 BKD09_RS27875 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000022|IPR029045 Carboxyl transferase|ClpP/crotonase-like domain G3DSA:3.90.226.10|PF01039|SSF52096 BKD09_RS27880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006089|IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase, conserved site|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PS00072|PS00073|SSF47203|SSF56645 BKD09_RS27885 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR018060|IPR032687 DNA binding HTH domain, AraC-type|HTH-type transcriptional regulator AraC-type, N-terminal|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12625|PF12833|SM00342|SSF46689 BKD09_RS27890 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021937 Protein of unknown function DUF3551 PF12071 BKD09_RS27895 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000485|IPR011008|IPR011991|IPR019887|IPR019888 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13412|PR00033|SM00344|SSF46785|SSF54909 BKD09_RS27900 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006885 NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial GO:0016651|GO:0022900 G3DSA:3.30.160.190|PF04800 BKD09_RS27905 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014550 Uncharacterised conserved protein UCP028704, OpgC PF10129|PIRSF028704 BKD09_RS27930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003795 Protein of unknown function DUF192 PF02643 BKD09_RS27935 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002059|IPR011129|IPR012340 Cold shock protein|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PR00050|SM00357|SSF50249 BKD09_RS27940 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003000|IPR026591|IPR028628|IPR029035 DHS-like NAD/FAD-binding domain|Sirtuin family|Sirtuin family, catalytic core small domain|Sirtuin, class U GO:0034979|GO:0051287|GO:0070403 G3DSA:3.30.1600.10|G3DSA:3.40.50.1220|MF_01968|PF02146|SSF52467 BKD09_RS27970 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021327 Protein of unknown function DUF2934 PF11154 BKD09_RS27975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000119|IPR010992 Histone-like DNA-binding protein|Integration host factor (IHF)-like DNA-binding domain GO:0003677 G3DSA:4.10.520.10|PF00216|SM00411|SSF47729 BKD09_RS28020 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:1.20.120.330|SSF158668 BKD09_RS28055 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004360|IPR018146|IPR029068 Glyoxalase I, conserved site|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain GO:0004462|GO:0046872 G3DSA:3.10.180.10|PF00903|PS00934|SSF54593 BKD09_RS28060 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004045|IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF02798|SSF47616|SSF52833 BKD09_RS28075 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic SSF141371 BKD09_RS28115 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008914 Phosphatidylethanolamine-binding protein G3DSA:3.90.280.10|PF01161|SSF49777 BKD09_RS28135 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011050|IPR012334 Pectin lyase fold|Pectin lyase fold/virulence factor G3DSA:2.160.20.10|SSF51126 BKD09_RS28160 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005804|IPR015876 Fatty acid desaturase domain|Fatty acid desaturase, type 1, core GO:0006629|GO:0016717|GO:0055114 PF00487|PR00075 BKD09_RS28170 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR026898 Protease PrsW GO:0008233 PF13367 BKD09_RS28175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005325 Protein of unknown function DUF308, membrane PF03729 BKD09_RS28180 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006218|IPR006219|IPR013785 Aldolase-type TIM barrel|DAHP synthetase I/KDSA|DHAP synthase, class 1 GO:0003824|GO:0003849|GO:0009058|GO:0009073 G3DSA:3.20.20.70|PF00793|PIRSF001361|SSF51569|TIGR00034 BKD09_RS28190 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003739|IPR007197|IPR013785|IPR022447|IPR025895 Aldolase-type TIM barrel|Lysine-2,3-aminomutase, C-terminal domain|Lysine-2,3-aminomutase-related|Lysine-2,3-aminomutase/glutamate 2,3-aminomutase|Radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|PF04055|PF12544|PF13353|PIRSF004911|SSF102114|TIGR00238|TIGR03822 BKD09_RS28195 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004364|IPR004525|IPR018149 Aminoacyl-tRNA synthetase, class II (D/K/N)|Elongation factor P--(R)-beta-lysine ligase|Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004812|GO:0004824|GO:0005524|GO:0005737|GO:0006418|GO:0006430 G3DSA:3.30.930.10|PF00152|PR00982|SSF55681|TIGR00462 BKD09_RS28200 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001059|IPR008991|IPR011768|IPR012340|IPR013185|IPR013852|IPR014722|IPR015365|IPR020599 Elongation factor P, C-terminal|Nucleic acid-binding, OB-fold|Ribosomal protein L2 domain 2|Translation elongation factor P|Translation elongation factor P/YeiP|Translation elongation factor P/YeiP, central|Translation elongation factor P/YeiP, conserved site|Translation elongation factor, KOW-like|Translation protein SH3-like domain GO:0003746|GO:0005737|GO:0006414|GO:0043043 G3DSA:2.30.30.30|G3DSA:2.40.50.140|MF_00141|PF01132|PF08207|PF09285|PIRSF005901|PS01275|SM00841|SM01185|SSF50104|SSF50249|TIGR00038 BKD09_RS28205 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:2.70.70.10 BKD09_RS28210 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 BKD09_RS28215 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003779|IPR004675|IPR029032 AhpD-like|Alkylhydroperoxidase AhpD core|Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 G3DSA:1.20.1290.10|PF02627|SSF69118|TIGR00778 BKD09_RS28220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12802|SM00347|SSF46785 BKD09_RS28240 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002477|IPR011970|IPR023346|IPR031304 Lysozyme-like domain|Lytic murein transglycosylase|Peptidoglycan binding-like|Transglycosylase SLT domain 2 G3DSA:1.10.101.10|G3DSA:1.10.530.10|PF01471|PF13406|SSF47090|SSF53955|TIGR02283 BKD09_RS28245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001303 Class II aldolase/adducin N-terminal G3DSA:3.40.225.10|PF00596|SM01007|SSF53639 BKD09_RS28250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00080|PR00081|SSF51735 BKD09_RS28255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001667|IPR003156|IPR004610 Bacterial RecJ exonuclease|DDH domain|DHHA1 domain GO:0003676|GO:0006281|GO:0006310|GO:0008409 PF01368|PF02272|SSF64182|TIGR00644 BKD09_RS28260 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004089|IPR004090 Chemotaxis methyl-accepting receptor|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020 G3DSA:1.10.287.950|G3DSA:3.30.450.20|PF00015|PR00260|SSF58104 BKD09_RS28265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925 BKD09_RS28275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016040 NAD(P)-binding domain G3DSA:3.40.50.720|PF13460|SSF51735 BKD09_RS28280 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 BKD09_RS28285 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|SSF54593 BKD09_RS28290 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|SM00849|SSF56281 BKD09_RS28295 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|SSF53474 BKD09_RS28300 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS28305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057 Homeodomain-like GO:0003677 G3DSA:1.10.10.60 BKD09_RS28310 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS28315 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006328|IPR006439|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain|Haloacid dehalogenase, type II GO:0008152|GO:0016787|GO:0019120 G3DSA:3.40.50.1000|PF13419|PR00413|SSF56784|TIGR01428|TIGR01493 BKD09_RS28320 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 G3DSA:3.30.540.10|PF03320|PIRSF004532|SSF56655|TIGR00330 BKD09_RS28325 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001342|IPR002912|IPR005106|IPR016040|IPR016204|IPR019811 ACT domain|Aspartate/homoserine dehydrogenase, NAD-binding|Homoserine dehydrogenase|Homoserine dehydrogenase, catalytic|Homoserine dehydrogenase, conserved site|NAD(P)-binding domain GO:0004412|GO:0006520|GO:0008152|GO:0016491|GO:0016597|GO:0050661|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.30.70.260|G3DSA:3.40.50.720|PF00742|PF01842|PF03447|PIRSF000098|PS01042|SSF51735|SSF55021|SSF55347 BKD09_RS28330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004838|IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferases, class-I, pyridoxal-phosphate-binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PS00105|SSF53383 BKD09_RS28340 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR010941|IPR010963|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Poly(R)-hydroxyalkanoic acid synthase, class I|Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0005737|GO:0016746|GO:0042619 G3DSA:3.40.50.1820|PF00561|PF07167|SSF53474|TIGR01838 BKD09_RS28345 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001129|IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain|Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein G3DSA:1.20.120.550|PF01124|SSF161084 BKD09_RS28350 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13489|SSF53335 BKD09_RS28355 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000534|IPR000706|IPR012280|IPR016040|IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site|N-acetyl-gamma-glutamyl-phosphate reductase, type 1|NAD(P)-binding domain|Semialdehyde dehydrogenase, NAD-binding|Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0006526|GO:0008652|GO:0016620|GO:0046983|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_00150|PF01118|PF02774|PS01224|SM00859|SSF51735|SSF55347|TIGR01850 BKD09_RS28360 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000534|IPR010136|IPR016040|IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site|N-acetyl-gamma-glutamyl-phosphate reductase, type 2|NAD(P)-binding domain|Semialdehyde dehydrogenase, NAD-binding GO:0003942|GO:0005737|GO:0006526|GO:0016620|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_01110|PF01118|PS01224|SM00859|SSF51735|SSF55347|TIGR01851 BKD09_RS28365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007396|IPR012349 FMN-binding split barrel|Transcriptional regulator PAI 2-type GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF04299|PIRSF010372|SSF50475 BKD09_RS28370 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|SM00849|SSF56281 BKD09_RS28375 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032816 SNARE associated Golgi protein PF09335 BKD09_RS28380 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000565|IPR001241|IPR002288|IPR003594|IPR005737|IPR006171|IPR013506|IPR013759|IPR013760|IPR014721|IPR018522|IPR020568 DNA gyrase B subunit, C-terminal|DNA topoisomerase IV, subunit B, Gram-negative|DNA topoisomerase, type IIA|DNA topoisomerase, type IIA, central domain|DNA topoisomerase, type IIA, conserved site|DNA topoisomerase, type IIA, subunit B|DNA topoisomerase, type IIA, subunit B, domain 2|DNA topoisomerase, type IIA-like domain|Histidine kinase-like ATPase, C-terminal domain|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Toprim domain GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 G3DSA:3.30.230.10|G3DSA:3.30.565.10|G3DSA:3.40.50.670|MF_00938|PF00204|PF00986|PF01751|PF02518|PR00418|PR01159|PS00177|SM00387|SM00433|SSF54211|SSF55874|SSF56719|TIGR01055 BKD09_RS28385 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005546|IPR011250|IPR027385 Autotransporter beta-domain|Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF103515 BKD09_RS28390 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005546|IPR011250 Autotransporter beta-domain|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|SSF103515 BKD09_RS28405 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00080|PR00081|SM00822|SSF51735 BKD09_RS28410 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 BKD09_RS28415 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002938|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain GO:0016491|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF01494|PR00420|SSF51905 BKD09_RS28425 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029030 Caspase-like domain G3DSA:3.40.50.1460|PF00656|SSF52129 BKD09_RS28430 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR018060|IPR018062 DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PS00041|SM00342|SSF46689 BKD09_RS28435 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000629|IPR001650|IPR011545|IPR014001|IPR027417 ATP-dependent RNA helicase DEAD-box, conserved site|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0005524 G3DSA:3.40.50.300|PF00270|PF00271|PS00039|SM00487|SM00490|SSF52540 BKD09_RS28440 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000160|IPR029787 GGDEF domain|Nucleotide cyclase G3DSA:3.30.70.270|PF00990|SM00267|SSF55073|TIGR00254 BKD09_RS28445 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013114|IPR029069 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ|HotDog domain G3DSA:3.10.129.10|PF07977|SSF54637 BKD09_RS28450 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007076 TfoX, N-terminal G3DSA:3.30.1460.30|PF04993|SSF159894 BKD09_RS28455 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000361|IPR016092 FeS cluster biogenesis|FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 G3DSA:2.60.300.12|PF01521|SSF89360|TIGR00049 BKD09_RS28460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002744|IPR014291 Domain of unknown function DUF59|SUF system FeS cluster assembly associated PF01883|SSF117916|TIGR02945 BKD09_RS28465 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000192|IPR010970|IPR015421|IPR015422|IPR015424|IPR016454|IPR020578 Aminotransferase class V domain|Aminotransferase class-V, pyridoxal-phosphate binding site|Cysteine desulfurase|Cysteine desulfurase, SufS|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0006534|GO:0030170|GO:0031071 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|PIRSF005572|PS00595|SSF53383|TIGR01979 BKD09_RS28470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000825|IPR011542 SUF system FeS cluster assembly, SufBD|SUF system FeS cluster assembly, SufD GO:0016226 PF01458|SSF101960|TIGR01981 BKD09_RS28475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR010230|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|FeS cluster assembly SUF system, ATPase SufC|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540|TIGR01978 BKD09_RS28480 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000825|IPR010231 SUF system FeS cluster assembly, SufB|SUF system FeS cluster assembly, SufBD GO:0016226 PF01458|SSF101960|TIGR01980 BKD09_RS28485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000192|IPR015421|IPR015422|IPR015424|IPR016454 Aminotransferase class V domain|Cysteine desulfurase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|PIRSF005572|SSF53383 BKD09_RS28490 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000383|IPR029058 Alpha/Beta hydrolase fold|Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 G3DSA:3.40.50.1820|PF02129|SSF53474 BKD09_RS28495 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012545 Protein of unknown function DUF1697 G3DSA:3.30.70.1280|PF08002|PIRSF008502|SSF160379 BKD09_RS28500 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000390 Small multidrug resistance protein family GO:0016021 PF00893|SSF103481 BKD09_RS28505 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004045|IPR005442|IPR010987|IPR012336 Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Glutathione S-transferase, omega-class|Thioredoxin-like fold GO:0004364|GO:0005515|GO:0005737|GO:0008152 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF13410|PF13417|PR01625|SSF47616|SSF52833 BKD09_RS28510 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 G3DSA:3.30.420.40|MF_01270|PF03702|SSF53067 BKD09_RS28515 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002305|IPR002307|IPR002942|IPR014729|IPR024107 Aminoacyl-tRNA synthetase, class Ic|RNA-binding S4 domain|Rossmann-like alpha/beta/alpha sandwich fold|Tyrosine-tRNA ligase|Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0000166|GO:0003723|GO:0004812|GO:0004831|GO:0005524|GO:0005737|GO:0006418|GO:0006437 G3DSA:1.10.240.10|G3DSA:3.10.290.10|G3DSA:3.40.50.620|MF_02006|PF00579|PR01040|SSF52374|SSF55174|TIGR00234 BKD09_RS28520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS28525 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032808 DoxX family PF07681 BKD09_RS28530 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003660|IPR004089|IPR033480 HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain|Single Cache domain 2 GO:0004871|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|G3DSA:3.30.450.20|PF00015|PF00672|PF17200|SM00283|SM00304|SM01049|SSF158472|SSF58104 BKD09_RS28535 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003660|IPR004089|IPR033480 HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain|Single Cache domain 2 GO:0004871|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|G3DSA:3.30.450.20|PF00015|PF00672|PF17200|SM00283|SM00304|SM01049|SSF58104 BKD09_RS28540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025263|IPR032712 AsmA-like, C-terminal|Domain of unknown function DUF3971 PF13116|PF13502 BKD09_RS28545 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000866|IPR012336|IPR024706 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Peroxiredoxin, AhpC-type|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF00578|PIRSF000239|SSF52833 BKD09_RS28550 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011055|IPR016047 Duplicated hybrid motif|Peptidase M23 G3DSA:2.70.70.10|PF01551|SSF51261 BKD09_RS28565 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001296|IPR013525|IPR028098 ABC-2 type transporter|Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain GO:0016020 G3DSA:3.40.50.2000|PF00534|PF01061|PF13579|SSF53756 BKD09_RS28570 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS28575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001296 Glycosyl transferase, family 1 G3DSA:3.40.50.2000|PF00534|SSF53756 BKD09_RS28580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007016 O-antigen ligase-related PF04932 BKD09_RS28590 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS28595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 BKD09_RS28600 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 BKD09_RS28605 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002204|IPR006115|IPR008927|IPR013328|IPR015815|IPR016040|IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain|3-hydroxyisobutyrate dehydrogenase-related|3-hydroxyisobutyrate dehydrogenase-related, conserved site|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, NADP-binding|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0004616|GO:0016491|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF03446|PF14833|PIRSF000103|PS00895|SSF48179|SSF51735 BKD09_RS28610 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000352|IPR004374|IPR005139|IPR014720|IPR020853 Double-stranded RNA-binding domain|Peptide chain release factor|Peptide chain release factor 2|Peptide chain release factor 2, bacterial|Peptide chain release factor class I/class II GO:0003747|GO:0005737|GO:0006415|GO:0016149 G3DSA:1.20.58.410|G3DSA:3.30.160.20|MF_00094|PF00472|PF03462|PS00745|SM00937|SSF75620|TIGR00020 BKD09_RS28615 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001264|IPR001460|IPR012338|IPR023346|IPR031376 Beta-lactamase/transpeptidase-like|Glycosyl transferase, family 51|Lysozyme-like domain|Penicillin-binding protein, OB-like domain|Penicillin-binding protein, transpeptidase GO:0008658 G3DSA:1.10.3810.10|G3DSA:3.40.710.10|PF00905|PF00912|PF17092|SSF53955|SSF56601|TIGR02074 BKD09_RS28620 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002508|IPR021731 AMIN domain|N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 G3DSA:3.40.630.40|PF01520|PF11741|SM00646|SSF53187 BKD09_RS28625 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004659|IPR012340|IPR019307|IPR028878 Nucleic acid-binding, OB-fold|RNA-binding protein AU-1/Ribonuclease E/G|Ribonuclease E|Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396|GO:0008995 G3DSA:2.40.50.140|MF_00970|PF10150|SSF50249|TIGR00757 BKD09_RS28630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006076|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01266|SSF51905 BKD09_RS28635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF13560|SM00530|SSF47413 BKD09_RS28640 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|PF01370|SSF51735 BKD09_RS28645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001991|IPR018107|IPR023954 C4-dicarboxylate transport protein|Sodium:dicarboxylate symporter|Sodium:dicarboxylate symporter, conserved site GO:0006835|GO:0015293|GO:0016021 G3DSA:1.10.3860.10|MF_01300|PF00375|PR00173|PS00714|SSF118215 BKD09_RS28650 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 PF02632|PIRSF016661 BKD09_RS28655 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|SSF53383 BKD09_RS28660 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001915|IPR011990|IPR019734 Peptidase M48|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0004222|GO:0005515|GO:0006508 G3DSA:1.25.40.10|G3DSA:3.30.2010.10|PF01435|PF13432|SM00028|SSF48452 BKD09_RS28665 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012336 Thioredoxin-like fold G3DSA:3.40.30.10|PF13462|SSF52833 BKD09_RS28670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009642 Protein of unknown function DUF1236 PF06823 BKD09_RS28675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001874|IPR018509 Dehydroquinase, class II|Dehydroquinase, class II, conserved site GO:0003855 G3DSA:3.40.50.9100|MF_00169|PD004527|PF01220|PIRSF001399|PS01029|SSF52304|TIGR01088 BKD09_RS28680 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000089|IPR001249|IPR001882|IPR011053 Acetyl-CoA biotin carboxyl carrier|Biotin-binding site|Biotin/lipoyl attachment|Single hybrid motif GO:0003989|GO:0006633|GO:0009317 G3DSA:2.40.50.100|PF00364|PR01071|PS00188|SSF51230|TIGR00531 BKD09_RS28685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004549|IPR005479|IPR005481|IPR005482|IPR011054|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Acetyl-CoA carboxylase, biotin carboxylase|Biotin carboxylase, C-terminal|Biotin carboxylase-like, N-terminal domain|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain|Pre-ATP-grasp domain|Rudiment single hybrid motif GO:0003824|GO:0005524|GO:0016874 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|PF00289|PF02785|PF02786|PS00866|PS00867|SM00878|SSF51246|SSF52440|SSF56059|TIGR00514 BKD09_RS28690 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003594|IPR003661|IPR004358|IPR007891 CHASE3|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF02518|PF05227|PR00344|SM00387|SM00388|SSF47384|SSF55874 BKD09_RS28695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 BKD09_RS28700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR003594|IPR011006|IPR011495 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF07568|PF13581|SM00387|SM00448|SSF52172|SSF55874 BKD09_RS28705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004616|IPR016181 Acyl-CoA N-acyltransferase|Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MF_00688|PF03588|SSF55729|TIGR00667 BKD09_RS28710 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019225 Protein of unknown function DUF2155 PF09923 BKD09_RS28715 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002168|IPR013094|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-3|Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 G3DSA:3.40.50.1820|PF07859|PS01173|SSF53474 BKD09_RS28725 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|SM00849|SSF56281 BKD09_RS28730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|SSF53335 BKD09_RS28735 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002818|IPR009057|IPR018060|IPR029062 Class I glutamine amidotransferase-like|DJ-1/PfpI|DNA binding HTH domain, AraC-type|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:3.40.50.880|PF01965|PF12833|SM00342|SSF46689|SSF52317 BKD09_RS28740 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002818|IPR029062 Class I glutamine amidotransferase-like|DJ-1/PfpI G3DSA:3.40.50.880|PF01965|SSF52317 BKD09_RS28745 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007763 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 GO:0008137|GO:0009055|GO:0016020 PF05071 BKD09_RS28750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012413 BA14k family GO:0009405 PF07886 BKD09_RS28755 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 BKD09_RS28760 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR001789|IPR003594|IPR003661|IPR004358|IPR007891|IPR011006|IPR013656 CHASE3|CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PF05227|PF08448|PR00344|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55785|SSF55874|TIGR00229 BKD09_RS28770 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005546 Autotransporter beta-domain G3DSA:2.40.128.130|PF03797|SM00869|SSF103515 BKD09_RS28775 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 BKD09_RS28780 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000788|IPR013344|IPR013678|IPR029072 Ribonucleotide reductase class II vitamin B12-dependent, N-terminal domain|Ribonucleotide reductase large subunit, C-terminal|Ribonucleotide reductase, adenosylcobalamin-dependent|YebC-like GO:0000166|GO:0004748|GO:0006260|GO:0031419|GO:0050897|GO:0055114 G3DSA:3.20.70.20|PF02867|PF08471|PR01183|SSF51998|SSF75625|TIGR02504 BKD09_RS28785 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025506 Protein of unknown function DUF4393 PF14337 BKD09_RS28790 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003115 ParB/Sulfiredoxin G3DSA:3.90.1530.10|PF02195|SM00470|SSF110849 BKD09_RS28805 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018968 Phasin PF09361 BKD09_RS28830 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008258|IPR023346 Lysozyme-like domain|Transglycosylase SLT domain 1 G3DSA:1.10.530.10|PF01464|SSF53955 BKD09_RS28850 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001387|IPR009875|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain|PilZ domain GO:0003677|GO:0035438|GO:0043565 G3DSA:1.10.260.40|PF07238|PF13560|SM00530|SSF141371|SSF47413 BKD09_RS28855 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004624|IPR013987|IPR013988 PhnA protein|PhnA protein, C-terminal|PhnA protein, N-terminal G3DSA:2.20.25.10|G3DSA:2.30.30.40|PF03831|PF08274|SSF57783|SSF82057|TIGR00686 BKD09_RS28860 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|SSF54593 BKD09_RS28865 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 BKD09_RS28870 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009959|IPR032710 NTF2-like domain|Polyketide cyclase SnoaL-like domain G3DSA:3.10.450.50|PF12680|SSF54427 BKD09_RS28875 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004026|IPR009057|IPR016220|IPR018060|IPR018062 Ada DNA repair, metal-binding|DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Methylphosphotriester-DNA alkyltransferase, AdaA GO:0003677|GO:0003700|GO:0006281|GO:0006355|GO:0008168|GO:0008270|GO:0043565 G3DSA:1.10.10.60|G3DSA:3.40.10.10|PF02805|PF12833|PIRSF000408|PS00041|SM00342|SSF46689|SSF57884 BKD09_RS28885 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007047 Flp/Fap pilin component PF04964 BKD09_RS28890 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain SSF55166 BKD09_RS28895 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004625|IPR013749|IPR029056 Pyridoxamine kinase/Phosphomethylpyrimidine kinase|Pyridoxine kinase|Ribokinase-like GO:0008478|GO:0009443 G3DSA:3.40.1190.20|PF08543|SSF53613|TIGR00687 BKD09_RS28900 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007396|IPR012349 FMN-binding split barrel|Transcriptional regulator PAI 2-type GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF04299|PIRSF010372|SSF50475 BKD09_RS28905 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|SSF46689 BKD09_RS28910 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13578|SSF53335 BKD09_RS28915 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000390 Small multidrug resistance protein family GO:0016021 PF00893|SSF103481 BKD09_RS28920 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893|IPR023772 DNA-binding HTH domain, TetR-type|DNA-binding HTH domain, TetR-type, conserved site|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|PS01081|SSF46689|SSF48498 BKD09_RS28925 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|SSF46626 BKD09_RS28935 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021937 Protein of unknown function DUF3551 PF12071 BKD09_RS28945 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002938|IPR012336|IPR012941|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain|Phenol hydroxylase, C-terminal dimerisation domain|Thioredoxin-like fold GO:0016491|GO:0055114|GO:0071949 G3DSA:3.30.9.10|G3DSA:3.40.30.20|G3DSA:3.50.50.60|PF01494|PF07976|PR00420|SSF51905|SSF52833|SSF54373 BKD09_RS28950 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PR00598|SM00347|SSF46785 BKD09_RS28955 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005297|IPR014558 Lipoprotein repeat|Uncharacterised conserved lipoprotein PF03640|PIRSF029720 BKD09_RS28960 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005490 L,D-transpeptidase catalytic domain GO:0016740 G3DSA:2.40.440.10|PF03734|SSF141523 BKD09_RS28975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00081|SSF51735 BKD09_RS28995 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 G3DSA:3.30.1070.10|MF_00262|PF03776|SSF55229|TIGR01215 BKD09_RS29000 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002586|IPR010223|IPR025501|IPR027417 ATP binding protein MinD|ATP binding protein MinD, bacterial-type|CobQ/CobB/MinD/ParA nucleotide binding domain|P-loop containing nucleoside triphosphate hydrolase GO:0016887 G3DSA:3.40.50.300|PF01656|PIRSF003092|SSF52540|TIGR01968 BKD09_RS29005 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005526|IPR007874|IPR013033|IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal|Septum formation inhibitor MinC|Septum formation inhibitor MinC, C-terminal|Septum formation inhibitor MinC, N-terminal GO:0000902|GO:0051302|GO:0051726|GO:1901891 G3DSA:2.160.20.70|MF_00267|PF03775|PF05209|SSF63848|TIGR01222 BKD09_RS29010 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003700|IPR015813 Ketopantoate hydroxymethyltransferase|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0003864|GO:0015940 G3DSA:3.20.20.60|MF_00156|PF02548|PIRSF000388|SSF51621|TIGR00222 BKD09_RS29015 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005532|IPR016187 C-type lectin fold|Sulfatase-modifying factor enzyme G3DSA:3.90.1580.10|PF03781|SSF56436 BKD09_RS29020 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000917|IPR017849|IPR017850 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Sulfatase, N-terminal GO:0003824|GO:0008152|GO:0008484 G3DSA:3.30.1120.10|G3DSA:3.40.720.10|PF00884|PF14707|SSF53649 BKD09_RS29025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000595|IPR014710|IPR018490 Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF00027|SM00100|SSF51206 BKD09_RS29030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|Nucleotide cyclase GO:0009190|GO:0016849|GO:0035556 G3DSA:3.30.450.20|G3DSA:3.30.70.1230|PF00211|SM00044|SSF55073 BKD09_RS29035 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015168 SsuA/THI5-like G3DSA:3.40.190.10|PF09084|SSF53850 BKD09_RS29040 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PF14514|PR00455|SSF46689|SSF48498 BKD09_RS29045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS29050 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|PF01370|SSF51735 BKD09_RS29055 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 BKD09_RS29060 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002220|IPR013785 Aldolase-type TIM barrel|DapA-like GO:0003824|GO:0008152|GO:0016829 G3DSA:3.20.20.70|PF00701|SM01130|SSF51569 BKD09_RS29065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|SM00382|SSF52540 BKD09_RS29070 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029058 Alpha/Beta hydrolase fold G3DSA:3.40.50.1820|SSF53474 BKD09_RS29080 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018389|IPR019546|IPR026289 Solute binding protein, mannitol/chloroaromatic system-like|TRAP transporter solute receptor DctP/TeaA|Twin-arginine translocation pathway, signal sequence, bacterial/archaeal GO:0006810|GO:0030288 PF03480|PF10518|PIRSF039026|SSF53850 BKD09_RS29090 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021225 Protein of unknown function DUF2778 PF10908 BKD09_RS29095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014937 Protein of unknown function DUF1810 PF08837|PIRSF008546|SSF140736 BKD09_RS29100 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003660|IPR004089 HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|SM00283|SM00304|SSF58104 BKD09_RS29105 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005025|IPR029039 Flavoprotein-like domain|NADPH-dependent FMN reductase-like GO:0016491 G3DSA:3.40.50.360|PF03358|SSF52218 BKD09_RS29110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR018060|IPR018062 DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PS00041|SM00342|SSF46689 BKD09_RS29115 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019285 Protein of unknown function DUF2336 PF10098 BKD09_RS29120 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009875 PilZ domain GO:0035438 PF07238|SSF141371 BKD09_RS29125 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003607|IPR006674|IPR006675 HD domain|HD/PDEase domain|HDIG domain G3DSA:1.10.3210.10|PF01966|SM00471|SSF109604|TIGR00277 BKD09_RS29135 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000415|IPR029479 Nitroreductase|Nitroreductase-like GO:0016491 G3DSA:3.40.109.10|PF00881|SSF55469 BKD09_RS29140 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002168|IPR013094|IPR019826|IPR029058|IPR033140 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-3|Carboxylesterase type B, active site|Lipase, GDXG, putative histidine active site|Lipase, GDXG, putative serine active site GO:0008152|GO:0016787 G3DSA:3.40.50.1820|PF07859|PS00122|PS01173|PS01174|SSF53474 BKD09_RS29150 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic SSF141371 BKD09_RS29160 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009282 Protein of unknown function DUF937 PF06078 BKD09_RS29170 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009009|IPR012997 Rare lipoprotein A|RlpA-like protein, double-psi beta-barrel domain G3DSA:2.40.40.10|PF03330|SSF50685|TIGR00413 BKD09_RS29175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|SM00849|SSF56281 BKD09_RS29180 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR017946|IPR030395 Glycerophosphodiester phosphodiesterase domain|PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 G3DSA:3.20.20.190|PF03009|SSF51695 BKD09_RS29185 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR032781 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-transporter extension domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12848|PS00211|SM00382|SSF52540 BKD09_RS29200 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005546 Autotransporter beta-domain G3DSA:2.40.128.130|PF03797|PR01228|SM00869|SSF103515 BKD09_RS29205 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005546|IPR030895 Autotransporter beta-domain|T5SS/PEP-CTERM-associated repeat G3DSA:2.40.128.130|PF03797|SM00869|SSF103515|TIGR04393 BKD09_RS29215 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006597|IPR011990 Sel1-like repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF08238|SM00671|SSF81901 BKD09_RS29220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.40.190.10|PF13531|SSF53850 BKD09_RS29225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032417 T3SS negative regulator GrlR PF16518 BKD09_RS29230 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008146|IPR008147|IPR014746|IPR027302|IPR027303 Glutamine synthetase, N-terminal conserved site|Glutamine synthetase, beta-Grasp domain|Glutamine synthetase, catalytic domain|Glutamine synthetase, glycine-rich site|Glutamine synthetase/guanido kinase, catalytic domain GO:0003824|GO:0004356|GO:0006542|GO:0006807 G3DSA:3.30.590.10|PF00120|PF03951|PS00180|PS00181|SM01230|SSF54368|SSF55931 BKD09_RS29240 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021232 Protein of unknown function DUF2735 PF10931 BKD09_RS29245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018660 C-type lysozyme, inhibitor PF09864|SSF141488 BKD09_RS29250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016130|IPR026893|IPR029021 Protein-tyrosine phosphatase, active site|Protein-tyrosine phosphatase-like|Tyrosine/serine-protein phosphatase IphP-type GO:0004725|GO:0016311|GO:0016791 G3DSA:3.90.190.10|PF13350|PS00383|SSF52799 BKD09_RS29255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|SSF51735 BKD09_RS29260 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032417 T3SS negative regulator GrlR PF16518 BKD09_RS29265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018679 Putative PD-(D/E)XK phosphodiesterase (DUF2161) PF09929 BKD09_RS29270 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007138|IPR011008 Antibiotic biosynthesis monooxygenase domain|Dimeric alpha-beta barrel G3DSA:3.30.70.900|PF03992|SSF54909 BKD09_RS29280 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 BKD09_RS29285 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003736|IPR006683|IPR029069 HotDog domain|Phenylacetic acid degradation-related domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|SSF54637|TIGR00369 BKD09_RS29290 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002491 ABC transporter periplasmic binding domain GO:0005488 G3DSA:3.40.50.1980|PF01497|SSF53807 BKD09_RS29295 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000192|IPR010111|IPR015421|IPR015422|IPR015424 Aminotransferase class V domain|Kynureninase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01970|PF00266|PIRSF038800|SSF53383|TIGR01814 BKD09_RS29300 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004981|IPR017485 Tryptophan 2,3-dioxygenase|Tryptophan 2,3-dioxygenase, bacterial GO:0004833|GO:0019441|GO:0020037 MF_01972|PF03301|SSF140959|TIGR03036 BKD09_RS29305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013094|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 G3DSA:3.40.50.1820|PF07859|SSF53474 BKD09_RS29310 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002933|IPR010182|IPR011650 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase|Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|SSF53187|SSF55031|TIGR01910 BKD09_RS29315 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012349|IPR024747 FMN-binding split barrel|Pyridoxamine 5'-phosphate oxidase-related GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF12900|SSF50475 BKD09_RS29320 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR004839|IPR011991|IPR015421|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0003824|GO:0006355|GO:0009058|GO:0030170 G3DSA:1.10.10.10|G3DSA:3.40.640.10|PF00155|PF00392|SM00345|SSF46785|SSF53383 BKD09_RS29345 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010292 Uncharacterised protein family CreA PF05981|PIRSF003174 BKD09_RS29350 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005490|IPR016915 L,D-transpeptidase catalytic domain|Uncharacterised conserved protein UCP029342 GO:0016740 G3DSA:2.40.440.10|PF03734|PIRSF029342|SSF141523 BKD09_RS29355 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000889|IPR012336|IPR029759 Glutathione peroxidase|Glutathione peroxidase active site|Thioredoxin-like fold GO:0004602|GO:0006979|GO:0055114 G3DSA:3.40.30.10|PF00255|PIRSF000303|PR01011|PS00460|SSF52833 BKD09_RS29360 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002509|IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF01522|SSF88713 BKD09_RS29365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR024072 Dihydrofolate reductase-like domain G3DSA:3.40.430.10|SSF53597 BKD09_RS29370 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 BKD09_RS29375 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032808 DoxX family PF07681 BKD09_RS29380 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002505|IPR012188|IPR012301|IPR012302|IPR016040 Malic enzyme, N-terminal domain|Malic enzyme, NAD-binding|Malic enzyme, phosphate acetyl/butaryl transferase|NAD(P)-binding domain|Phosphate acetyl/butaryl transferase GO:0004471|GO:0004473|GO:0005829|GO:0006108|GO:0008152|GO:0016616|GO:0016746|GO:0030145|GO:0046872|GO:0051287|GO:0055114 G3DSA:3.40.50.10380|G3DSA:3.40.50.10750|G3DSA:3.40.50.720|PF00390|PF01515|PF03949|PIRSF036684|SM00919|SM01274|SSF51735|SSF53223|SSF53659 BKD09_RS29390 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002312|IPR004115|IPR004364|IPR004365|IPR004524|IPR012340|IPR029351 Aminoacyl-tRNA synthetase, class II (D/K/N)|Aspartate-tRNA ligase, bacterial/mitochondrial-type|Aspartyl/Asparaginyl-tRNA synthetase, class IIb|GAD domain|GAD-like domain|Nucleic acid-binding, OB-fold|OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0000166|GO:0003676|GO:0004812|GO:0005524|GO:0005737|GO:0006418|GO:0016874 G3DSA:2.40.50.140|G3DSA:3.30.1360.30|G3DSA:3.30.930.10|MF_00044|PF00152|PF01336|PF02938|PR01042|SSF50249|SSF55261|SSF55681|TIGR00459 BKD09_RS29395 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003846 Uncharacterised protein family UPF0061 MF_00692|PF02696 BKD09_RS29400 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 G3DSA:3.30.70.1290|PF01797|SM01321|SSF143422 BKD09_RS29405 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011055|IPR016047 Duplicated hybrid motif|Peptidase M23 G3DSA:2.70.70.10|PF01551|SSF51261 BKD09_RS29410 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004843|IPR026575|IPR029052 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA|Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0004115|GO:0016787 G3DSA:3.60.21.10|MF_00905|PF00149|SSF56300 BKD09_RS29415 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS29420 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS29425 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.40.190.10|PF13416|SSF53850 BKD09_RS29430 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS29435 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS29440 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR008995|IPR012340|IPR013611|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0016887|GO:0043190 G3DSA:2.40.50.140|G3DSA:3.40.50.300|PF00005|PF08402|PS00211|SM00382|SSF50331|SSF52540 BKD09_RS29445 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.40.190.10|PF13416|SSF53850 BKD09_RS29450 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|SM00345|SM00895|SSF46785|SSF48008 BKD09_RS29455 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|SM00829|SSF50129|SSF51735 BKD09_RS29460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 BKD09_RS29465 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002121|IPR002562|IPR006292|IPR010997|IPR012337 3'-5' exonuclease domain|HRDC domain|HRDC-like|Ribonuclease D|Ribonuclease H-like domain GO:0000166|GO:0003676|GO:0003824|GO:0005622|GO:0006139|GO:0008033|GO:0008408|GO:0033890|GO:0044237 G3DSA:3.30.420.10|MF_01899|PF00570|PF01612|SM00474|SSF47819|SSF53098|TIGR01388 BKD09_RS29470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005814|IPR015421|IPR015422|IPR015424 Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0008483|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00202|PIRSF000521|PS00600|SSF53383 BKD09_RS29475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005829|IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain|Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PS00217|SSF103473 BKD09_RS29480 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|SM00346|SSF46785|SSF55781 BKD09_RS29485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002938|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain GO:0016491|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF01494|PR00420|SSF51905 BKD09_RS29490 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|PF00857|SSF52499 BKD09_RS29495 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13673|SSF55729 BKD09_RS29505 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 BKD09_RS29510 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005546 Autotransporter beta-domain G3DSA:2.40.128.130|PF03797|SM00869|SSF103515 BKD09_RS29515 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002059|IPR011129|IPR012156|IPR012340|IPR019844 Cold shock protein|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|SM00357|SSF50249 BKD09_RS29520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002376|IPR004607 Formyl transferase, N-terminal|Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189|GO:0009058|GO:0016742 G3DSA:3.40.50.170|MF_01930|PF00551|SSF53328|TIGR00639 BKD09_RS29525 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004733|IPR010918|IPR016188 AIR synthase-related protein, C-terminal domain|Phosphoribosylformylglycinamidine cyclo-ligase|PurM-like, N-terminal domain GO:0004641|GO:0005737|GO:0006189 G3DSA:3.30.1330.10|G3DSA:3.90.650.10|MF_00741|PF00586|PF02769|SSF55326|SSF56042|TIGR00878 BKD09_RS29530 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000462|IPR004570 CDP-alcohol phosphatidyltransferase|CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016020|GO:0016021|GO:0016780 PF01066|PIRSF000847 BKD09_RS29535 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013317|IPR027417 Chromosomal replication initiator protein DnaA|P-loop containing nucleoside triphosphate hydrolase G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00308|SSF52540 BKD09_RS29540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003414|IPR024953|IPR025198|IPR025200 Polyphosphate kinase|Polyphosphate kinase C-terminal domain|Polyphosphate kinase N-terminal domain|Polyphosphate kinase middle domain GO:0006799|GO:0008976|GO:0009358 G3DSA:3.30.1840.10|G3DSA:3.30.870.10|MF_00347|PF02503|PF13089|PF13090|PIRSF015589|SSF140356|SSF143724|SSF56024|TIGR03705 BKD09_RS29545 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003695|IPR022371 Exopolyphosphatase|Ppx/GppA phosphatase GO:0004309|GO:0006793 G3DSA:3.30.420.150|G3DSA:3.30.420.40|PF02541|SSF109604|SSF53067|TIGR03706 BKD09_RS29550 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005625 PepSY-associated TM protein PF03929 BKD09_RS29555 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000531|IPR010105|IPR010917|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, conserved site|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PS01156|SSF56935|TIGR01783 BKD09_RS29560 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005496|IPR022301 Integral membrane protein TerC|Integral membrane protein YjbE GO:0016021 PF03741|TIGR03717 BKD09_RS29565 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001564|IPR023005 Nucleoside diphosphate kinase|Nucleoside diphosphate kinase, active site GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 G3DSA:3.30.70.141|MF_00451|PF00334|PR01243|PS00469|SM00562|SSF54919 BKD09_RS29580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR032781 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-transporter extension domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12848|PS00211|SM00382|SSF52540 BKD09_RS29585 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 BKD09_RS29590 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003997|IPR006144|IPR010129 RTX secretion protein D, Gram-negative bacteria|Secretion protein HlyD, conserved site|Type I secretion membrane fusion protein, HlyD family GO:0008565|GO:0009306|GO:0015031|GO:0016020|GO:0016021 G3DSA:2.40.50.100|PF13437|PF13533|PR01490|PS00543|SSF111369|TIGR01843 BKD09_RS29595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR005074|IPR010132|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|ATPase, type I secretion system, HlyB|P-loop containing nucleoside triphosphate hydrolase|Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0006810|GO:0008233|GO:0008565|GO:0016021|GO:0016887|GO:0030253|GO:0030256|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|G3DSA:3.90.70.10|PF00005|PF00664|PF03412|PS00211|SM00382|SSF52540|SSF90123|TIGR01846 BKD09_RS29600 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001343|IPR011049|IPR018511 Haemolysin-type calcium-binding repeat|Hemolysin-type calcium-binding conserved site|Serralysin-like metalloprotease, C-terminal GO:0005509 G3DSA:2.150.10.10|PF00353|PR00313|PS00330|SSF51120 BKD09_RS29610 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 G3DSA:3.40.50.10110|PF04364|SSF102400 BKD09_RS29615 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000819|IPR008283|IPR011356|IPR023042 Peptidase M17, leucine aminopeptidase|Peptidase M17, leucine aminopeptidase/peptidase B|Peptidase M17, leucyl aminopeptidase, C-terminal|Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0005737|GO:0006508|GO:0008235|GO:0019538|GO:0030145 G3DSA:3.40.220.10|G3DSA:3.40.630.10|MF_00181|PF00883|PF02789|PR00481|PS00631|SSF52949|SSF53187 BKD09_RS29620 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005495|IPR030922 LPS export ABC transporter permease LptF|Permease LptG/LptF-related GO:0016021|GO:0043190|GO:0055085 PF03739|TIGR04407 BKD09_RS29625 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005495|IPR030923 LPS export ABC transporter permease LptG|Permease LptG/LptF-related GO:0016021|GO:0043190|GO:0055085 PF03739|TIGR04408 BKD09_RS29630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007543|IPR020889 LPS-assembly protein LptD|Organic solvent tolerance protein, C-terminal GO:0009279|GO:0010033|GO:0015920|GO:0019867|GO:0043165|GO:0061024 G3DSA:2.60.450.10|MF_01411|PF04453 BKD09_RS29635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015391|IPR027304 SurA N-terminal|Trigger factor/SurA domain PF09312|SSF109998 BKD09_RS29640 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005255|IPR024084 4-hydroxythreonine-4-phosphate dehydrogenase PdxA|Isopropylmalate dehydrogenase-like domain GO:0008615|GO:0016616|GO:0050570|GO:0051287|GO:0055114 G3DSA:3.40.718.10|MF_00536|PF04166|SSF53659|TIGR00557 BKD09_RS29645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001737|IPR011530|IPR020596|IPR020598|IPR023165|IPR029063 Ribosomal RNA adenine dimethylase|Ribosomal RNA adenine methylase transferase, N-terminal|Ribosomal RNA adenine methylase transferase, conserved site|Ribosomal RNA adenine methyltransferase KsgA/Erm|S-adenosyl-L-methionine-dependent methyltransferase|rRNA adenine dimethylase-like GO:0000154|GO:0000179|GO:0006364|GO:0008649 G3DSA:1.10.8.100|G3DSA:3.40.50.150|MF_00607|PF00398|PS01131|SM00650|SSF53335|TIGR00755 BKD09_RS29650 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002328|IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|Alcohol dehydrogenase, zinc-type, conserved site|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PS00059|SM00829|SSF50129|SSF51735 BKD09_RS29665 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF13545|SM00419|SSF46785|SSF51206 BKD09_RS29685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025240|IPR029030 Caspase-like domain|Domain of unknown function DUF4189 G3DSA:3.40.50.1460|PD968187|PF00656|PF13827|SSF52129 BKD09_RS29700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008145|IPR017665|IPR020590|IPR027417 Guanylate kinase|Guanylate kinase, conserved site|Guanylate kinase/L-type calcium channel beta subunit|P-loop containing nucleoside triphosphate hydrolase GO:0004385|GO:0006163 G3DSA:3.30.63.10|G3DSA:3.40.50.300|MF_00328|PF00625|PS00856|SM00072|SSF52540|TIGR03263 BKD09_RS29705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005229|IPR013527|IPR013551 Conserved hypothetical protein CHP00255|Domain of unknown function DUF1732|YicC-like, N-terminal PF03755|PF08340|TIGR00255 BKD09_RS29710 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003770|IPR013087 Uncharacterised protein family UPF0755, YceG-like|Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 G3DSA:3.30.160.60|PF02618|TIGR00247 BKD09_RS29715 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014030|IPR014031|IPR016039|IPR017568|IPR018201|IPR020841 3-oxoacyl-[acyl-carrier-protein] synthase 2|Beta-ketoacyl synthase, C-terminal|Beta-ketoacyl synthase, N-terminal|Beta-ketoacyl synthase, active site|Polyketide synthase, beta-ketoacyl synthase domain|Thiolase-like GO:0003824|GO:0006633|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00109|PF02801|PIRSF000447|PS00606|SM00825|SSF53901|TIGR03150 BKD09_RS29720 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003231|IPR006162|IPR009081|IPR020806 Acyl carrier protein (ACP)|Phosphopantetheine attachment site|Phosphopantetheine binding ACP domain|Polyketide synthase, phosphopantetheine-binding domain GO:0006633|GO:0031177 G3DSA:1.10.1200.10|MF_01217|PD000887|PF00550|PS00012|SM00823|SSF47336|TIGR00517 BKD09_RS29725 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR011284|IPR016040|IPR020904 3-oxoacyl-(acyl-carrier-protein) reductase|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0004316|GO:0006633|GO:0016491|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SM00822|SSF51735|TIGR01830 BKD09_RS29730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001227|IPR004410|IPR014043|IPR016035|IPR016036|IPR020801|IPR024925 Acyl transferase|Acyl transferase domain|Acyl transferase/acyl hydrolase/lysophospholipase|Malonyl CoA-acyl carrier protein transacylase|Malonyl CoA-acyl carrier protein transacylase, FabD-type|Malonyl-CoA ACP transacylase, ACP-binding|Polyketide synthase, acyl transferase domain GO:0003824|GO:0004314|GO:0008152|GO:0016740 G3DSA:3.30.70.250|G3DSA:3.40.366.10|PF00698|PIRSF000446|SM00827|SSF52151|SSF55048|TIGR00128 BKD09_RS29735 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005804 Fatty acid desaturase domain GO:0006629 PF00487 BKD09_RS29740 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PF16914|PR00455|SSF46689|SSF48498 BKD09_RS29745 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000529|IPR014717|IPR020814 Ribosomal protein S6|Ribosomal protein S6, plastid/chloroplast|Translation elongation factor EF1B/ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 G3DSA:3.30.70.60|MF_00360|PF01250|SSF54995|TIGR00166 BKD09_RS29750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001648|IPR018275 Ribosomal protein S18|Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:4.10.640.10|MF_00270|PD002239|PF01084|PR00974|PS00057|SSF46911|TIGR00165 BKD09_RS29760 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009027|IPR020069|IPR020070|IPR020594 Ribosomal protein L9, C-terminal|Ribosomal protein L9, N-terminal|Ribosomal protein L9, bacteria/chloroplast|Ribosomal protein L9/RNase H1, N-terminal GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.10.430.100|G3DSA:3.40.5.10|MF_00503|PF01281|PF03948|PS00651|SSF55653|SSF55658|TIGR00158 BKD09_RS29765 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003736|IPR006683|IPR029069 HotDog domain|Phenylacetic acid degradation-related domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|SSF54637|TIGR00369 BKD09_RS29770 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|SSF46689|SSF48498 BKD09_RS29775 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10 BKD09_RS29785 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003593|IPR007692|IPR007693|IPR007694|IPR016136|IPR027417 AAA+ ATPase domain|DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal|DNA helicase, DnaB type|DNA helicase, DnaB-like, C-terminal|DNA helicase, DnaB-like, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003678|GO:0005524|GO:0006260 G3DSA:1.10.860.10|G3DSA:3.40.50.300|PF00772|PF03796|SM00382|SSF48024|SSF52540|TIGR00665 BKD09_RS29790 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000821|IPR001608|IPR009006|IPR011079|IPR020622|IPR029066 Alanine racemase|Alanine racemase, C-terminal|Alanine racemase, N-terminal|Alanine racemase, pyridoxal-phosphate attachment site|Alanine racemase/group IV decarboxylase, C-terminal|PLP-binding barrel GO:0003824|GO:0006522|GO:0008784 G3DSA:2.40.37.10|G3DSA:3.20.20.10|MF_01201|PF00842|PF01168|PR00992|PS00395|SM01005|SSF50621|SSF51419|TIGR00492 BKD09_RS29795 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001893 Cysteine-rich Golgi apparatus protein 1 repeat GO:0016020 PF00839 BKD09_RS29805 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004808|IPR005135|IPR020847 AP endonuclease 1|AP endonuclease 1, binding site|Endonuclease/exonuclease/phosphatase GO:0003677|GO:0004518|GO:0004519|GO:0005622|GO:0006281 G3DSA:3.60.10.10|PF03372|PS00726|SSF56219|TIGR00195|TIGR00633 BKD09_RS29815 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006913|IPR011057 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V|Mss4-like GO:0008152|GO:0016846 G3DSA:3.90.1590.10|PF04828|SSF51316 BKD09_RS29825 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|SM00345|SM00895|SSF46785|SSF48008 BKD09_RS29830 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006115|IPR008927|IPR013328|IPR015815|IPR016040|IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain|3-hydroxyisobutyrate dehydrogenase-related|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, NADP-binding|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0004616|GO:0016491|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF03446|PF14833|PIRSF000103|SSF48179|SSF51735 BKD09_RS29835 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 BKD09_RS29840 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 BKD09_RS29845 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030679 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-type amino acid transport system, ATPase component, HisP-type|P-loop containing nucleoside triphosphate hydrolase GO:0003333|GO:0005524|GO:0015424|GO:0016887 G3DSA:3.40.50.300|PF00005|PIRSF039085|PS00211|SM00382|SSF52540 BKD09_RS29850 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001638 Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF00497|SM00062|SSF53850 BKD09_RS29855 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003500|IPR004785 Ribose 5-phosphate isomerase B|Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0004751|GO:0005975|GO:0006098|GO:0016853 G3DSA:3.40.1400.10|PF02502|PIRSF005384|SSF89623|TIGR00689|TIGR01120 BKD09_RS29860 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925 BKD09_RS29865 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000160|IPR001633|IPR003660|IPR029787 EAL domain|GGDEF domain|HAMP domain|Nucleotide cyclase GO:0004871|GO:0007165|GO:0016021 G3DSA:3.20.20.450|G3DSA:3.30.70.270|PF00563|PF00672|PF00990|SM00052|SM00267|SM00304|SSF141868|SSF158472|SSF55073|TIGR00254 BKD09_RS29870 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025997|IPR028082 Periplasmic binding protein|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13407|SSF53822 BKD09_RS29875 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003593|IPR004504|IPR014721|IPR020568|IPR027417 AAA+ ATPase domain|DNA repair protein RadA|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0003684|GO:0005524|GO:0006281 G3DSA:3.30.230.10|G3DSA:3.40.50.300|MF_01498|PF13481|PF13541|PR01874|SM00382|SSF52540|SSF54211|TIGR00416 BKD09_RS29880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 PF02674 BKD09_RS29885 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000836|IPR005854|IPR017932|IPR029055|IPR029057 Amidophosphoribosyltransferase|Glutamine amidotransferase type 2 domain|Nucleophile aminohydrolases, N-terminal|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0004044|GO:0009113|GO:0009116 G3DSA:3.40.50.2020|G3DSA:3.60.20.10|MF_01931|PF00156|PF13537|PIRSF000485|SSF53271|SSF56235|TIGR01134 BKD09_RS29890 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|SM00822|SSF51735 BKD09_RS29895 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011042 Six-bladed beta-propeller, TolB-like G3DSA:2.120.10.30|SSF63829 BKD09_RS29900 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS29905 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001958|IPR005829|IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain|Sugar transporter, conserved site|Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PR01035|PS00216|SSF103473 BKD09_RS29910 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005225|IPR006073|IPR015946|IPR016484|IPR027417|IPR032859 GTP binding domain|GTP-binding protein EngA|GTPase Der, C-terminal KH-domain-like|K homology domain-like, alpha/beta|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain GO:0005525 G3DSA:3.30.300.20|G3DSA:3.40.50.300|MF_00195|PF01926|PF14714|PIRSF006485|PR00326|SSF52540|TIGR00231|TIGR03594 BKD09_RS29920 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018704 Tetratricopeptide repeat-like domain PF09976 BKD09_RS29925 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR020459|IPR020845|IPR025110 AMP-binding|AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PR00154|PS00455|SSF56801 BKD09_RS29930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009915 NnrU domain PF07298 BKD09_RS29940 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000795|IPR004161|IPR004548|IPR005225|IPR009000|IPR009022|IPR027417|IPR031157|IPR032090 Elongation factor G, III-V domain|P-loop containing nucleoside triphosphate hydrolase|Peptide chain release factor 3|Peptide chain release factor 3, C-terminal|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFTu-like, domain 2|Translation protein, beta-barrel domain GO:0003924|GO:0005525|GO:0005737|GO:0006415|GO:0016149 G3DSA:2.40.30.10|G3DSA:3.30.70.870|G3DSA:3.40.50.300|MF_00072|PF00009|PF03144|PF16658|PR00315|PS00301|SSF50447|SSF52540|SSF54980|TIGR00231|TIGR00503 BKD09_RS29945 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000390 Small multidrug resistance protein family GO:0016021 PF00893|SSF103481 BKD09_RS29950 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 PF01384 BKD09_RS29955 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018445 Putative phosphate transport regulator PF01865 BKD09_RS29960 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS29965 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS29970 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS29975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS29980 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|SM00382|SSF52540 BKD09_RS29990 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006504|IPR006660|IPR012336 Arsenate reductase-like|Thioredoxin-like fold|Transcriptional regulator Spx/MgsR G3DSA:3.40.30.10|PF03960|SSF52833|TIGR01617 BKD09_RS29995 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002547|IPR008231|IPR012340 Nucleic acid-binding, OB-fold|Probable chaperone CsaA|tRNA-binding domain GO:0000049 G3DSA:2.40.50.140|PF01588|SSF50249|TIGR02222 BKD09_RS30000 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PF13977|PR00455|SSF46689|SSF48498 BKD09_RS30005 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925 BKD09_RS30010 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004045|IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF02798|SSF47616|SSF52833 BKD09_RS30015 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007362 Protein of unknown function DUF429 PF04250 BKD09_RS30020 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003779|IPR004675|IPR029032 AhpD-like|Alkylhydroperoxidase AhpD core|Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 G3DSA:1.20.1290.10|PF02627|SSF69118|TIGR00778 BKD09_RS30025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|SSF88659|SSF88946|TIGR02937 BKD09_RS30030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021309 Protein of unknown function DUF2892 PF11127 BKD09_RS30035 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001466|IPR012338 Beta-lactamase-related|Beta-lactamase/transpeptidase-like G3DSA:3.40.710.10|PF00144|SSF56601 BKD09_RS30040 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013653|IPR016181 Acyl-CoA N-acyltransferase|FR47-like GO:0016747 G3DSA:3.40.630.30|PF08445|SSF55729 BKD09_RS30045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011719|IPR018316 Conserved hypothetical protein CHP02058|Tubulin/FtsZ, 2-layer sandwich domain G3DSA:3.30.1330.20|PF09585|TIGR02058 BKD09_RS30050 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011766|IPR012000|IPR012001|IPR029035|IPR029061 DHS-like NAD/FAD-binding domain|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0030976 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|SSF52467|SSF52518 BKD09_RS30055 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 BKD09_RS30060 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004370|IPR014347 4-oxalocrotonate tautomerase|Tautomerase/MIF superfamily GO:0006725|GO:0016853 G3DSA:3.30.429.20|PF01361|SSF55331 BKD09_RS30065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13578|SSF53335 BKD09_RS30070 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005149|IPR011991 Transcription regulator PadR, N-terminal|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF03551|SSF46785 BKD09_RS30075 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003779|IPR004675|IPR029032 AhpD-like|Alkylhydroperoxidase AhpD core|Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 G3DSA:1.20.1290.10|PF02627|SSF69118|TIGR00778 BKD09_RS30080 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007351 Uncharacterised protein YjbR PF04237|SSF142906 BKD09_RS30085 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PR00598|SM00347|SSF46785 BKD09_RS30090 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003718|IPR015946|IPR019953 K homology domain-like, alpha/beta|Organic hydroperoxide resistance protein famiy|OsmC/Ohr family GO:0006979 G3DSA:2.20.25.10|G3DSA:3.30.300.20|PF02566|SSF82784|TIGR03561 BKD09_RS30095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 BKD09_RS30100 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR000835|IPR011991|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain|MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355|GO:0008080 G3DSA:1.10.10.10|G3DSA:3.40.630.30|PF00583|PF12802|SM00347|SSF46785|SSF55729 BKD09_RS30105 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS30110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 BKD09_RS30120 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|SSF46689|SSF48498 BKD09_RS30125 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023635 Peptide deformylase G3DSA:3.90.45.10|MF_00163|PF01327|PIRSF004749|PR01576|SSF56420|TIGR00079 BKD09_RS30130 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR011990|IPR019734|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|Nucleotide cyclase|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515|GO:0009190|GO:0016849|GO:0035556 G3DSA:1.25.40.10|G3DSA:3.30.70.1230|PF00211|PF13181|SM00028|SSF48452|SSF55073 BKD09_RS30135 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008258|IPR023346 Lysozyme-like domain|Transglycosylase SLT domain 1 G3DSA:1.10.530.10|PF01464|SSF53955 BKD09_RS30140 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007487 ABC transporter, substrate-binding protein G3DSA:3.40.50.2300|PF04392 BKD09_RS30145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000917|IPR017849|IPR017850|IPR024607 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Sulfatase, N-terminal|Sulfatase, conserved site GO:0003824|GO:0008152|GO:0008484 G3DSA:3.40.720.10|PF00884|PS00149|SSF53649 BKD09_RS30155 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001807|IPR014743 Chloride channel, core|Chloride channel, voltage gated GO:0005216|GO:0005247|GO:0006821|GO:0016020|GO:0055085 G3DSA:1.10.3080.10|PF00654|PR00762|SSF81340 BKD09_RS30175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS30180 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001845|IPR011991 HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12840|PR00778|SM00418|SSF46785 BKD09_RS30185 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013538|IPR023393 Activator of Hsp90 ATPase homologue 1-like|START-like domain GO:0006950 G3DSA:3.30.530.20|PF08327|SSF55961 BKD09_RS30190 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR010499|IPR011256|IPR018060|IPR018062|IPR020449|IPR029442 Bacterial transcription activator, effector binding|DNA binding HTH domain, AraC-type|GyrI-like small molecule binding domain|HTH domain AraC-type, conserved site|Homeodomain-like|Regulatory factor, effector binding domain|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:3.20.80.10|PF06445|PF12833|PR00032|PS00041|SM00342|SM00871|SSF46689|SSF55136 BKD09_RS30195 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001466|IPR012338 Beta-lactamase-related|Beta-lactamase/transpeptidase-like G3DSA:3.40.710.10|PF00144|SSF56601 BKD09_RS30200 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009291|IPR011040 Sialidases|Vacuolar protein sorting-associated protein 62 G3DSA:2.120.10.10|PF06101|SSF50939 BKD09_RS30205 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006748|IPR011009 Aminoglycoside/hydroxyurea antibiotic resistance kinase|Protein kinase-like domain GO:0006468|GO:0016773|GO:0019748 G3DSA:3.90.1200.10|PF04655|SSF56112 BKD09_RS30220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003313|IPR009057|IPR011051|IPR018060|IPR020449|IPR032783 AraC-type arabinose-binding/dimerisation domain|AraC-type transcription regulator, ligand-binding domain|DNA binding HTH domain, AraC-type|Homeodomain-like|RmlC-like cupin domain|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:2.60.120.280|PF12833|PF12852|PR00032|SM00342|SSF46689|SSF51182 BKD09_RS30225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|SSF53474 BKD09_RS30230 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF00561|PR00111|SSF53474 BKD09_RS30235 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005180 Domain of unknown function DUF302 G3DSA:3.30.310.70|PF03625|SSF103247 BKD09_RS30240 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR020846 Major facilitator superfamily domain G3DSA:1.20.1250.20|SSF103473 BKD09_RS30245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000326|IPR026841 Inositolphosphotransferase Aur1/Ipt1|Phosphatidic acid phosphatase type 2/haloperoxidase G3DSA:1.20.144.10|PF14378|SSF48317 BKD09_RS30250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 BKD09_RS30255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00080|PR00081|SM00822|SSF51735 BKD09_RS30260 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016040|IPR028939 NAD(P)-binding domain|Pyrroline-5-carboxylate reductase, catalytic, N-terminal G3DSA:3.40.50.720|PF03807|SSF51735 BKD09_RS30265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000157|IPR007560|IPR011335|IPR011856 Restriction endonuclease type II-like|Restriction endonuclease type IV, Mrr|Toll/interleukin-1 receptor homology (TIR) domain|tRNA endonuclease-like domain GO:0003676|GO:0003677|GO:0004518|GO:0004519|GO:0005515|GO:0007165|GO:0009307 G3DSA:3.40.1350.10|G3DSA:3.40.50.10140|PF04471|PF13676|SM00255|SSF52200|SSF52980 BKD09_RS30275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001674|IPR004739|IPR014729|IPR017926|IPR022310|IPR022955|IPR029062 Class I glutamine amidotransferase-like|GMP synthase|GMP synthase, C-terminal|GMP synthase, N-terminal|Glutamine amidotransferase|NAD/GMP synthase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003922|GO:0005524|GO:0006164|GO:0006177 G3DSA:3.30.300.10|G3DSA:3.40.50.620|G3DSA:3.40.50.880|MF_00344|PF00117|PF00958|PF02540|PR00096|PR00097|SSF52317|SSF52402|SSF54810|TIGR00884|TIGR00888 BKD09_RS30280 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009959|IPR032710 NTF2-like domain|Polyketide cyclase SnoaL-like domain G3DSA:3.10.450.50|PF12680|SSF54427 BKD09_RS30285 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011051|IPR014710 RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|SSF51182 BKD09_RS30290 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002059|IPR011129|IPR012156|IPR012340|IPR019844 Cold shock protein|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|SM00357|SSF50249 BKD09_RS30295 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001678|IPR023267|IPR029063 RNA (C5-cytosine) methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase|SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 G3DSA:3.30.70.1170|G3DSA:3.40.50.150|PF01189|PR02008|SSF53335 BKD09_RS30300 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001129|IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain|Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein G3DSA:1.20.120.550|PF01124|SSF161084 BKD09_RS30310 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|SSF56300 BKD09_RS30315 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR026956|IPR029066 D-serine dehydratase-like domain|PLP-binding barrel G3DSA:3.20.20.10|PF14031|SM01119|SSF51419 BKD09_RS30320 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 BKD09_RS30325 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 BKD09_RS30330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030679 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-type amino acid transport system, ATPase component, HisP-type|P-loop containing nucleoside triphosphate hydrolase GO:0003333|GO:0005524|GO:0015424|GO:0016887 G3DSA:3.40.50.300|PF00005|PIRSF039085|PS00211|SM00382|SSF52540 BKD09_RS30335 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001638 Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF00497|SM00062|SSF53850 BKD09_RS30340 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006175|IPR013813|IPR019897 Endoribonuclease L-PSP/chorismate mutase-like|RidA, conserved site|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|PS01094|SSF55298 BKD09_RS30345 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 G3DSA:3.40.630.10|PF04952|PIRSF039012|SSF53187 BKD09_RS30350 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000843|IPR010982|IPR028082 LacI-type HTH domain|Lambda repressor-like, DNA-binding domain|Periplasmic binding protein-like I GO:0003677|GO:0006355 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|SM00354|SSF47413|SSF53822 BKD09_RS30360 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011032|IPR013149|IPR016040|IPR020843 Alcohol dehydrogenase, C-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF16884|SM00829|SSF50129|SSF51735 BKD09_RS30365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000644|IPR001093|IPR005990|IPR013785|IPR015875 Aldolase-type TIM barrel|CBS domain|IMP dehydrogenase / GMP reductase, conserved site|IMP dehydrogenase/GMP reductase|Inosine-5'-monophosphate dehydrogenase GO:0003824|GO:0003938|GO:0006164|GO:0016491|GO:0055114 G3DSA:3.20.20.70|MF_01964|PF00478|PF00571|PIRSF000130|PS00487|SM00116|SM01240|SSF51412|SSF54631|TIGR01302 BKD09_RS30370 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PR01036|SSF103473 BKD09_RS30375 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008217 Ccc1 family PF01988 BKD09_RS30380 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010239 Conserved hypothetical protein CHP02001 PF09694|TIGR02001 BKD09_RS30385 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013781|IPR017853 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain GO:0005975 G3DSA:2.60.40.1500|G3DSA:3.20.20.80|SSF51445 BKD09_RS30390 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002877|IPR015507|IPR029063 Ribosomal RNA large subunit methyltransferase E|Ribosomal RNA methyltransferase FtsJ domain|S-adenosyl-L-methionine-dependent methyltransferase GO:0001510|GO:0008168|GO:0032259 G3DSA:3.40.50.150|MF_01547|PF01728|PIRSF005461|SSF53335 BKD09_RS30395 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003695 Ppx/GppA phosphatase G3DSA:3.30.420.150|G3DSA:3.30.420.40|PF02541|SSF53067 BKD09_RS30400 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000674|IPR008274 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF01315|PF02738|SM01008|SSF54665|SSF56003 BKD09_RS30405 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011013|IPR033396 Domain of unknown function DUF5107|Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 PF17128|SSF74650 BKD09_RS30410 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029069 HotDog domain G3DSA:3.10.129.10|SSF54637 BKD09_RS30415 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003791 Protein of unknown function UPF0178 MF_00489|PF02639 BKD09_RS30420 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR032524 AAA+ ATPase domain|ABC transporter Uup, C-terminal|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF16326|PS00211|SM00382|SSF52540 BKD09_RS30425 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001608|IPR026956|IPR029066 Alanine racemase, N-terminal|D-serine dehydratase-like domain|PLP-binding barrel G3DSA:3.20.20.10|PF01168|PF14031|SM01119|SSF51419 BKD09_RS30430 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS30435 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS30440 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004792|IPR022460|IPR023753 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like|Conserved hyptotheical protein CHP03862, flavoprotein, PP4765|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.50.50.60|PF03486|PR00419|SSF160996|SSF51905|TIGR00275|TIGR03862 BKD09_RS30445 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|SM00822|SSF51735 BKD09_RS30450 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002539|IPR029069 HotDog domain|MaoC-like domain G3DSA:3.10.129.10|PF01575|SSF54637 BKD09_RS30455 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR025110 AMP-binding enzyme C-terminal domain|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|SSF56801 BKD09_RS30460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002204|IPR006115|IPR008927|IPR011548|IPR013328|IPR015815|IPR016040|IPR029154 3-hydroxyisobutyrate dehydrogenase|3-hydroxyisobutyrate dehydrogenase, NAD-binding domain|3-hydroxyisobutyrate dehydrogenase-related|3-hydroxyisobutyrate dehydrogenase-related, conserved site|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, NADP-binding|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0004616|GO:0008442|GO:0016491|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF03446|PF14833|PIRSF000103|PS00895|SSF48179|SSF51735|TIGR01692 BKD09_RS30465 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014748|IPR029045|IPR032259 ClpP/crotonase-like domain|Crontonase, C-terminal|Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 G3DSA:1.10.12.10|G3DSA:3.90.226.10|PF16113|SSF52096 BKD09_RS30470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006089|IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase, conserved site|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PS00072|PS00073|SSF47203|SSF56645 BKD09_RS30475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010061|IPR015590|IPR016160|IPR016161|IPR016162|IPR016163 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde/histidinol dehydrogenase|Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|SSF53720|TIGR01722 BKD09_RS30480 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 BKD09_RS30485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|SSF46689|SSF48498 BKD09_RS30490 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003736|IPR006683|IPR029069 HotDog domain|Phenylacetic acid degradation-related domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|SSF54637|TIGR00369 BKD09_RS30495 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001753|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|SSF52096 BKD09_RS30500 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002155|IPR016039|IPR020610|IPR020616|IPR020617 Thiolase|Thiolase, C-terminal|Thiolase, N-terminal|Thiolase, active site|Thiolase-like GO:0003824|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00108|PF02803|PIRSF000429|PS00099|SSF53901|TIGR01930 BKD09_RS30505 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS30510 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 PF04966 BKD09_RS30515 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 G3DSA:1.20.58.340|PF01544|SSF143865|SSF144083 BKD09_RS30520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010451|IPR023375 Acetoacetate decarboxylase|Acetoacetate decarboxylase beta barrel domain GO:0016829 G3DSA:2.40.400.10|PF06314|SSF160104 BKD09_RS30525 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002641|IPR016035|IPR021095 Acyl transferase/acyl hydrolase/lysophospholipase|Patatin/Phospholipase A2-related|Protein of unknown function DUF3734 GO:0006629|GO:0008152 G3DSA:3.40.1090.10|PF01734|PF12536|SSF52151 BKD09_RS30530 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002818|IPR029062 Class I glutamine amidotransferase-like|DJ-1/PfpI G3DSA:3.40.50.880|PF01965|SSF52317 BKD09_RS30535 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012495 TadE-like PF07811 BKD09_RS30540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012495 TadE-like PF07811 BKD09_RS30545 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal PF13400 BKD09_RS30550 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|SM00346|SSF46785|SSF55781 BKD09_RS30555 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000192|IPR015421|IPR015422|IPR015424 Aminotransferase class V domain|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|SSF53383 BKD09_RS30560 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001638 Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF00497|SM00062|SSF53850 BKD09_RS30565 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 BKD09_RS30570 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 BKD09_RS30575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030679 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-type amino acid transport system, ATPase component, HisP-type|P-loop containing nucleoside triphosphate hydrolase GO:0003333|GO:0005524|GO:0015424|GO:0016887 G3DSA:3.40.50.300|PF00005|PIRSF039085|PS00211|SM00382|SSF52540 BKD09_RS30580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004113|IPR006094|IPR016164|IPR016166|IPR016167|IPR016169|IPR016171 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|FAD-linked oxidase, C-terminal|FAD-linked oxidase-like, C-terminal|Vanillyl-alcohol oxidase, C-terminal subdomain 2 GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:1.10.45.10|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF01565|PF02913|SSF55103|SSF56176 BKD09_RS30585 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006656|IPR006657|IPR006963|IPR009010 Aspartate decarboxylase-like domain|Molybdopterin dinucleotide-binding domain|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0030151|GO:0055114 G3DSA:2.20.25.90|G3DSA:2.40.40.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|PF00384|PF01568|PF04879|SM00926|SSF50692|SSF53706 BKD09_RS30590 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021734 Protein of unknown function DUF3303 PF11746 BKD09_RS30595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000022|IPR029045 Carboxyl transferase|ClpP/crotonase-like domain G3DSA:3.90.226.10|PF01039|SSF52096 BKD09_RS30600 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005471|IPR011991|IPR029016 GAF domain-like|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF09339|SM00346|SSF46785|SSF55781 BKD09_RS30605 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000089|IPR001882|IPR011053 Biotin-binding site|Biotin/lipoyl attachment|Single hybrid motif G3DSA:2.40.50.100|PF00364|PS00188|SSF51230 BKD09_RS30610 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011852 TRAP transporter solute receptor, TAXI family G3DSA:3.40.190.10|PF16868|SSF53850|TIGR02122 BKD09_RS30615 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010656|IPR011853 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter, 4TM/12TM fusion protein PF06808|TIGR02123 BKD09_RS30620 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000595|IPR002645|IPR012338|IPR014710|IPR015868|IPR018488|IPR018490 Beta-lactamase/transpeptidase-like|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding, conserved site|Cyclic nucleotide-binding-like|Glutaminase|RmlC-like jelly roll fold|STAS domain GO:0004359|GO:0006541 G3DSA:2.60.120.10|G3DSA:3.30.750.24|G3DSA:3.40.710.10|MF_00313|PF00027|PF04960|PS00888|SM00100|SSF51206|SSF52091|SSF56601|TIGR03814 BKD09_RS30625 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004518|IPR011379 NTP Pyrophosphohydrolase MazG-related, GP37|NTP pyrophosphohydrolase MazG, putative catalytic core G3DSA:1.10.287.1080|PF03819|PIRSF006639|SSF101386 BKD09_RS30630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003779|IPR029032 AhpD-like|Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 G3DSA:1.20.1290.10|PF02627|SSF69118 BKD09_RS30635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002878|IPR012340|IPR022002 Domain of unknown function DUF35, OB-fold, C-terminal|Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal|Nucleic acid-binding, OB-fold PF01796|PF12172|SSF50249 BKD09_RS30640 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002155|IPR016039|IPR020616 Thiolase|Thiolase, N-terminal|Thiolase-like GO:0003824|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00108|PIRSF000429|SSF53901 BKD09_RS30645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|SSF89796 BKD09_RS30655 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002155|IPR016039|IPR020616|IPR020617 Thiolase|Thiolase, C-terminal|Thiolase, N-terminal|Thiolase-like GO:0003824|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00108|PF02803|PIRSF000429|SSF53901 BKD09_RS30660 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000887|IPR013785 Aldolase-type TIM barrel|KDPG/KHG aldolase GO:0003824|GO:0008152|GO:0016829 G3DSA:3.20.20.70|PF01081|SSF51569|TIGR01182 BKD09_RS30665 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002173|IPR011611|IPR029056 Carbohydrate kinase PfkB|Carbohydrate/puine kinase, PfkB, conserved site|Ribokinase-like GO:0016773 G3DSA:3.40.1190.20|PF00294|PS00584|SSF53613 BKD09_RS30670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|SSF51735 BKD09_RS30675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS30680 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS30685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.40.190.10|PF13416|SSF53850 BKD09_RS30690 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR008995|IPR012340|IPR013611|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0016887|GO:0043190 G3DSA:2.40.50.100|G3DSA:2.40.50.140|G3DSA:3.40.50.300|PF00005|PF08402|PS00211|SM00382|SSF50331|SSF52540 BKD09_RS30695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000843|IPR010982|IPR028082 LacI-type HTH domain|Lambda repressor-like, DNA-binding domain|Periplasmic binding protein-like I GO:0003677|GO:0006355 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|SM00354|SSF47413|SSF53822 BKD09_RS30700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000581|IPR015928|IPR020558 Aconitase/3-isopropylmalate dehydratase, swivel|Dihydroxy-acid/6-phosphogluconate dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 PF00920|PS00886|SSF143975|SSF52016 BKD09_RS30705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SSF51735 BKD09_RS30710 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SSF51735 BKD09_RS30715 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001466|IPR012338 Beta-lactamase-related|Beta-lactamase/transpeptidase-like G3DSA:3.40.710.10|PF00144|SSF56601 BKD09_RS30720 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006913|IPR011057 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V|Mss4-like GO:0008152|GO:0016846 G3DSA:3.90.1590.10|PF04828|SSF51316 BKD09_RS30725 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 BKD09_RS30730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS30745 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006260 TonB, C-terminal GO:0006810 G3DSA:3.30.1150.10|PF13103|SSF74653|TIGR01352 BKD09_RS30750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003400|IPR014170 Biopolymer transport protein ExbD/TolR|TonB system transport protein ExbD type-1 GO:0005215|GO:0006810|GO:0016020 PF02472|TIGR02803 BKD09_RS30755 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002898|IPR014164 MotA/TolQ/ExbB proton channel|TonB-system energizer ExbB type-1 GO:0006810|GO:0008565|GO:0016020 PF01618|TIGR02797 BKD09_RS30760 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005123|IPR006620|IPR023550 Oxoglutarate/iron-dependent dioxygenase|PKHD-type hydroxylase|Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016491|GO:0016705|GO:0016706|GO:0031418|GO:0055114 MF_00657|PF13640|SM00702|SSF51197 BKD09_RS30765 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|SSF56935 BKD09_RS30775 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|SSF111369|TIGR01730 BKD09_RS30780 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|SSF82693|SSF82714|SSF82866 BKD09_RS30785 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010642 Invasion protein B PF06776 BKD09_RS30790 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000917|IPR013320|IPR017849|IPR017850 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Concanavalin A-like lectin/glucanase domain|Sulfatase, N-terminal GO:0003824|GO:0008152|GO:0008484 G3DSA:2.60.120.200|G3DSA:3.30.1120.10|G3DSA:3.40.720.10|PF00884|SSF49899|SSF53649 BKD09_RS30795 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|SSF46689 BKD09_RS30800 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS30805 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|SM00382|SSF52540 BKD09_RS30810 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS30815 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS30820 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS30830 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009874|IPR011008 Dimeric alpha-beta barrel|Protein of unknown function DUF1428 G3DSA:3.30.70.900|PF07237|PIRSF007028|SSF54909 BKD09_RS30835 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029030 Caspase-like domain G3DSA:3.40.50.1460|PF00656|SSF52129 BKD09_RS30860 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005064 Bordetella uptake gene GO:0030288 G3DSA:3.40.190.10|PF03401|PIRSF017082|SSF53850 BKD09_RS30865 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001670|IPR018211 Alcohol dehydrogenase, iron-type|Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 G3DSA:1.20.1090.10|G3DSA:3.40.50.1970|PF00465|PS00913|SSF56796 BKD09_RS30870 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005255|IPR024084 4-hydroxythreonine-4-phosphate dehydrogenase PdxA|Isopropylmalate dehydrogenase-like domain GO:0008615|GO:0016616|GO:0050570|GO:0051287|GO:0055114 G3DSA:3.40.718.10|MF_00536|PF04166|SSF53659|TIGR00557 BKD09_RS30875 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010737|IPR031475 Putative nucleotide-binding C-terminal domain|Putative sugar-binding, N-terminal domain PF07005|PF17042|SSF142764 BKD09_RS30880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004113|IPR006094|IPR016164|IPR016166|IPR016167|IPR016169|IPR016171 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|FAD-linked oxidase, C-terminal|FAD-linked oxidase-like, C-terminal|Vanillyl-alcohol oxidase, C-terminal subdomain 2 GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:1.10.45.10|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF01565|PF02913|SSF55103|SSF56176 BKD09_RS30885 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002220|IPR013785 Aldolase-type TIM barrel|DapA-like GO:0003824|GO:0008152|GO:0016829 G3DSA:3.20.20.70|PF00701|PIRSF001365|PR00146|SM01130|SSF51569 BKD09_RS30890 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|SM00346|SSF46785|SSF55781 BKD09_RS30895 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279|IPR013471 Metallo-beta-lactamase|Ribonuclease Z/BN GO:0016891|GO:0042779 G3DSA:3.60.15.10|MF_01818|PF12706|SM00849|SSF56281|TIGR02651 BKD09_RS30900 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011008 Dimeric alpha-beta barrel G3DSA:3.30.70.900|SSF54909 BKD09_RS30905 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006680|IPR011059|IPR014311|IPR032466 Amidohydrolase-related|Guanine deaminase|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0006147|GO:0008270|GO:0008892|GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|SSF51338|SSF51556|TIGR02967 BKD09_RS30910 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS30915 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|PR00111|SSF53474 BKD09_RS30920 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|SM00345|SM00895|SSF46785|SSF48008 BKD09_RS30925 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015590|IPR016161|IPR016162|IPR016163 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|SSF53720 BKD09_RS30930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005828|IPR005829|IPR020846 Major facilitator superfamily domain|Major facilitator, sugar transporter-like|Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1250.20|PF00083|PS00216|SSF103473 BKD09_RS30935 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR020556|IPR023631 Amidase signature domain|Amidase, conserved site G3DSA:3.90.1300.10|PF01425|PIRSF001221|PS00571|SSF75304 BKD09_RS30945 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PR00455|SSF46689|SSF48498 BKD09_RS30950 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|SSF111369|TIGR01730 BKD09_RS30955 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001036|IPR004764|IPR027463 Acriflavin resistance protein|Hydrophobe/amphiphile efflux-1 HAE1|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3850.10|G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|G3DSA:3.30.70.1440|PF00873|PR00702|SSF82693|SSF82714|SSF82866|TIGR00915 BKD09_RS30960 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925 BKD09_RS30970 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00196|SM00421|SSF46894 BKD09_RS30975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.20|SM00421|SSF46894 BKD09_RS30985 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003313|IPR009057|IPR018060|IPR018062|IPR020449 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PF14525|PR00032|PS00041|SM00342|SSF46689 BKD09_RS30990 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR000792|IPR011991|IPR016032 PAS domain|Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.20|PF00196|SM00421|SSF46894|SSF55785 BKD09_RS31000 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002539|IPR029069 HotDog domain|MaoC-like domain G3DSA:3.10.129.10|PF01575|SSF54637 BKD09_RS31015 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023346|IPR031304 Lysozyme-like domain|Transglycosylase SLT domain 2 G3DSA:1.10.530.10|PF13406|SSF53955 BKD09_RS31020 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013708|IPR016040 NAD(P)-binding domain|Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 G3DSA:3.40.192.10|G3DSA:3.40.50.720|PF08501|SSF51735|SSF53223 BKD09_RS31025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF13738|SSF51905 BKD09_RS31030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801 BKD09_RS31035 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021345 Protein of unknown function DUF2961 PF11175 BKD09_RS31040 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003684 Porin, alpha proteobacteria type GO:0006810|GO:0015288|GO:0016020 PF02530 BKD09_RS31045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 BKD09_RS31050 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003684 Porin, alpha proteobacteria type GO:0006810|GO:0015288|GO:0016020 PF02530 BKD09_RS31055 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 BKD09_RS31060 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|SSF47203|SSF56645 BKD09_RS31065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF13437|PF13533|SSF111369|TIGR01730 BKD09_RS31070 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012451 Protein of unknown function DUF1656 PF07869 BKD09_RS31075 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 PF04632 BKD09_RS31080 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000835|IPR011991|IPR023187 MarR-type HTH domain|Transcriptional regulator MarR-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12802|PR00598|PS01117|SM00347|SSF46785 BKD09_RS31085 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001958|IPR005829|IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain|Sugar transporter, conserved site|Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PR01035|PS00216|SSF103473 BKD09_RS31090 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001638 Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF00497|SM00062|SSF53850 BKD09_RS31095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|SM00382|SSF52540 BKD09_RS31100 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS31105 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS31110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS31115 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000709|IPR028081|IPR028082 Leu/Ile/Val-binding protein|Leucine-binding protein domain|Periplasmic binding protein-like I GO:0006865 G3DSA:3.40.50.2300|PF13458|PR00337|SSF53822 BKD09_RS31120 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016787|GO:0016810 G3DSA:3.20.20.140|PF01979|SSF51338|SSF51556 BKD09_RS31125 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015168 SsuA/THI5-like G3DSA:3.40.190.10|PF09084|SSF53850 BKD09_RS31130 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS31135 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS31140 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|SM00345|SM00895|SSF46785|SSF48008 BKD09_RS31145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032710 NTF2-like domain G3DSA:3.10.450.50|SSF54427 BKD09_RS31150 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|SSF51338|SSF51556 BKD09_RS31155 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011059|IPR013108|IPR032466 Amidohydrolase 3|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF07969|SSF51338|SSF51556 BKD09_RS31165 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006115|IPR008927|IPR013328|IPR015814|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, NADP-binding|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain|Phosphogluconate dehydrogenase, NAD-binding, putative, C-terminal GO:0004616|GO:0016491|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF03446|PF09130|SSF48179|SSF51735 BKD09_RS31170 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015168 SsuA/THI5-like G3DSA:3.40.190.10|PF09084|SSF53850 BKD09_RS31175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005493|IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase|Ribonuclease E inhibitor RraA/RraA-like protein G3DSA:3.50.30.40|PF03737|SSF89562|TIGR02798 BKD09_RS31180 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003737|IPR024078 N-acetylglucosaminyl phosphatidylinositol deacetylase-related|Putative deacetylase LmbE-like domain G3DSA:3.40.50.10320|PF02585|SSF102588 BKD09_RS31185 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006680|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase GO:0016787 G3DSA:3.20.20.140|PF04909|SSF51556 BKD09_RS31190 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893|IPR023772 DNA-binding HTH domain, TetR-type|DNA-binding HTH domain, TetR-type, conserved site|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|PS01081|SSF46689|SSF48498 BKD09_RS31195 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005064 Bordetella uptake gene GO:0030288 G3DSA:3.40.190.10|PF03401|PIRSF017082|SSF53850 BKD09_RS31200 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001638 Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF00497|SM00062|SSF53850 BKD09_RS31205 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008482 Protein of unknown function DUF763 PF05559 BKD09_RS31210 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001128|IPR002397|IPR017972 Cytochrome P450|Cytochrome P450, B-class|Cytochrome P450, conserved site GO:0005506|GO:0016705|GO:0020037|GO:0055114 G3DSA:1.10.630.10|PF00067|PR00359|PR00385|PS00086|SSF48264 BKD09_RS31220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001221|IPR001433|IPR001709|IPR008333|IPR017938 Flavoprotein pyridine nucleotide cytochrome reductase|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Phenol hydroxylase reductase|Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.40.50.80|PF00175|PF00970|PR00371|PR00410|SSF52343|SSF63380 BKD09_RS31225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|SSF51338|SSF51556 BKD09_RS31240 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PR00598|SM00347|SSF46785 BKD09_RS31245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS31250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|PS00211|SM00382|SSF52540 BKD09_RS31255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS31260 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000709|IPR028081|IPR028082 Leu/Ile/Val-binding protein|Leucine-binding protein domain|Periplasmic binding protein-like I GO:0006865 G3DSA:3.40.50.2300|PF13458|PR00337|SSF53822 BKD09_RS31265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009569 Amino acid synthesis, putative G3DSA:3.30.1330.110|PF06684|SSF160519 BKD09_RS31270 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003374|IPR007183 ApbE-like domain|Uncharacterised protein family UPF0280 G3DSA:3.10.520.10|PIRSF006421|SSF143631 BKD09_RS31280 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001041|IPR002888|IPR006058|IPR012675 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|[2Fe-2S]-binding GO:0009055|GO:0016491|GO:0046872|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.150.120|G3DSA:3.10.20.30|PF00111|PF01799|PS00197|SSF47741|SSF54292 BKD09_RS31285 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000674|IPR008274|IPR009056 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding|Cytochrome c-like domain GO:0009055|GO:0016491|GO:0020037|GO:0055114 G3DSA:1.10.760.10|G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF00034|PF02738|PF13442|SM01008|SSF46626|SSF54665|SSF56003 BKD09_RS31290 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004360|IPR017624|IPR029068 Catechol 2,3 dioxygenase|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain GO:0008198|GO:0018577|GO:0019439|GO:0055114 G3DSA:3.10.180.10|PF00903|SSF54593|TIGR03211 BKD09_RS31295 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002789|IPR027417 Helicase HerA, central domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF01935|SSF52540 BKD09_RS31300 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR011990|IPR027417|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|Nucleotide cyclase|P-loop containing nucleoside triphosphate hydrolase|Tetratricopeptide-like helical domain GO:0005515|GO:0009190|GO:0016849|GO:0035556 G3DSA:1.25.40.10|G3DSA:3.30.70.1230|G3DSA:3.40.50.300|PF00211|PF13191|SM00044|SSF48452|SSF52540|SSF55073 BKD09_RS31305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|SSF46626 BKD09_RS31310 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003779|IPR004675|IPR010195|IPR029032 AhpD-like|Alkylhydroperoxidase AhpD core|Carboxymuconolactone decarboxylase-like|Uncharacterised peroxidase-related GO:0051920|GO:0055114 G3DSA:1.20.1290.10|G3DSA:1.20.5.810|PF02627|SSF69118|TIGR00778|TIGR01926 BKD09_RS31315 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PF02308|PR01837 BKD09_RS31320 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|SM00419|SSF46785|SSF51206 BKD09_RS31335 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003115|IPR014956|IPR016932 ParB/Sulfiredoxin|Putative ParB-like nuclease|Uncharacterised conserved protein UCP029669 G3DSA:1.10.8.10|G3DSA:3.90.1530.10|PF08857|PIRSF029669|SSF110849 BKD09_RS31345 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006162|IPR009081 Phosphopantetheine attachment site|Phosphopantetheine binding ACP domain G3DSA:1.10.1200.10|PF00550|PS00012|SSF47336 BKD09_RS31350 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013114|IPR029069 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ|HotDog domain G3DSA:3.10.129.10|PF07977|SSF54637 BKD09_RS31355 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014030|IPR016039 Beta-ketoacyl synthase, N-terminal|Thiolase-like GO:0003824|GO:0008152 G3DSA:3.40.47.10|PF00109|SSF53901 BKD09_RS31360 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014030|IPR014031|IPR016039|IPR018201|IPR020841 Beta-ketoacyl synthase, C-terminal|Beta-ketoacyl synthase, N-terminal|Beta-ketoacyl synthase, active site|Polyketide synthase, beta-ketoacyl synthase domain|Thiolase-like GO:0003824|GO:0008152 G3DSA:3.40.47.10|PF00109|PF02801|PS00606|SM00825|SSF53901 BKD09_RS31365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 PF03279 BKD09_RS31375 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 BKD09_RS31380 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001867|IPR011990|IPR011991|IPR016032|IPR019734 OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Tetratricopeptide repeat|Tetratricopeptide-like helical domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0005515|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.25.40.10|PF00486|PF13424|SM00028|SM00862|SSF46894|SSF48452 BKD09_RS31385 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005546|IPR011050|IPR012332|IPR013425 Autotransporter beta-domain|Autotransporter-associated beta strand repeat|P22 tailspike C-terminal domain-like|Pectin lyase fold/virulence factor G3DSA:2.160.20.20|G3DSA:2.40.128.130|PF12951|SM00869|SSF103515|SSF51126|TIGR02601 BKD09_RS31390 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 G3DSA:3.40.190.10|PF13416|PIRSF019574|PR00909|SSF53850 BKD09_RS31395 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|SSF53383 BKD09_RS31400 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001763 Rhodanese-like domain G3DSA:3.40.250.10|PF00581|SM00450|SSF52821 BKD09_RS31405 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003855|IPR023051 Potassium transporter|Potassium uptake protein, low affinity, Kup GO:0015079|GO:0016020|GO:0071805 MF_01522|PF02705 BKD09_RS31410 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003855|IPR023051 Potassium transporter|Potassium uptake protein, low affinity, Kup GO:0015079|GO:0016020|GO:0071805 MF_01522|PF02705 BKD09_RS31415 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006665|IPR025713 Motility protein B, N-terminal domain|OmpA-like domain G3DSA:3.30.1330.60|PF00691|PF13677|SSF103088 BKD09_RS31420 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000540|IPR002898 Flagellar motor protein MotA, conserved site|MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PF01618|PS01307 BKD09_RS31425 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF00106|PR00080|PR00081|SSF51735 BKD09_RS31435 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein G3DSA:3.50.30.40|PF03737|SSF89562 BKD09_RS31440 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000462|IPR012616 CDP-alcohol phosphatidyltransferase|CDP-alcohol phosphatidyltransferase, C-terminal GO:0008654|GO:0016020|GO:0016780 PF01066|PF08009|PS00379 BKD09_RS31445 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003817|IPR033175 Phosphatidylserine decarboxylase, archaeal-type|Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 MF_00664|PF02666|TIGR00164 BKD09_RS31450 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|SM00382|SSF52540|SSF90123 BKD09_RS31455 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005269|IPR031100 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG|LOG family G3DSA:3.40.50.450|PF03641|SSF102405|TIGR00730 BKD09_RS31460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|SSF54593 BKD09_RS31465 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000891|IPR002034|IPR005675|IPR013709|IPR013785 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain|Aldolase-type TIM barrel|Alpha-isopropylmalate/homocitrate synthase, conserved site|Citramalate synthase|Pyruvate carboxyltransferase GO:0003824|GO:0003852|GO:0009098|GO:0019752|GO:0046912 G3DSA:3.20.20.70|PF00682|PF08502|PS00815|SM00917|SSF110921|SSF51569|TIGR00977 BKD09_RS31470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13673|SSF55729 BKD09_RS31475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009080|IPR014729|IPR015803|IPR024909|IPR032678 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding|Cysteine-tRNA ligase|Cysteinyl-tRNA synthetase/mycothiol ligase|Rossmann-like alpha/beta/alpha sandwich fold|tRNA synthetases class I, catalytic domain GO:0000166|GO:0004812|GO:0004817|GO:0005524|GO:0006418|GO:0006423 G3DSA:3.40.50.620|MF_00041|PF01406|PR00983|SSF47323|SSF52374|TIGR00435 BKD09_RS31485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021293 Protein of unknown function DUF2865 PF11064 BKD09_RS31490 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018692 Predicted integral membrane protein DUF2189 PF09955 BKD09_RS31495 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001505|IPR002429|IPR008972|IPR011759 Copper centre Cu(A)|Cupredoxin|Cytochrome C oxidase subunit II, transmembrane domain|Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020|GO:0016021|GO:0022900 G3DSA:1.10.287.90|G3DSA:2.60.40.420|PF00116|PS00078|SSF49503|SSF81464 BKD09_RS31500 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000883|IPR023615|IPR023616 Cytochrome c oxidase subunit I|Cytochrome c oxidase, subunit I domain|Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 G3DSA:1.20.210.10|PF00115|PR01165|PS00077|SSF81442 BKD09_RS31505 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000298|IPR013833 Cytochrome c oxidase subunit III domain|Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0015002|GO:0016020|GO:0022904 G3DSA:1.20.120.80|PF00510|SSF81452 BKD09_RS31510 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000298|IPR013833 Cytochrome c oxidase subunit III domain|Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0015002|GO:0016020|GO:0022904 G3DSA:1.20.120.80|PF00510|SSF81452 BKD09_RS31515 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 PF03626 BKD09_RS31520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003010|IPR003694|IPR014445|IPR014729|IPR022310 Carbon-nitrogen hydrolase|Glutamine-dependent NAD(+) synthetase|NAD(+) synthetase|NAD/GMP synthase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003952|GO:0005524|GO:0006807|GO:0009435|GO:0016810 G3DSA:3.40.50.620|G3DSA:3.60.110.10|PF00795|PF02540|PIRSF006630|SSF52402|SSF56317|TIGR00552 BKD09_RS31525 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 G3DSA:1.10.3830.10|PF01219 BKD09_RS31530 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 PF01474|SSF51569|TIGR01358 BKD09_RS31535 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR017208|IPR022742|IPR029058 Alpha/Beta hydrolase fold|Serine aminopeptidase, S33|Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 G3DSA:3.40.50.1820|PF12146|PIRSF037442|SSF53474 BKD09_RS31540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF02518|PR00344|SM00387|SM00388|SSF47384|SSF55874 BKD09_RS31545 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR001867|IPR011006|IPR011991 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF52172 BKD09_RS31550 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007136 Protein of unknown function DUF347 PF03988 BKD09_RS31560 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007136 Protein of unknown function DUF347 PF03988 BKD09_RS31570 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015590|IPR016160|IPR016161|IPR016162|IPR016163|IPR029510 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|PS00687|SSF53720 BKD09_RS31575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR011991|IPR024370 PBP domain|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF12727|SSF46785|SSF53850 BKD09_RS31580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR011991|IPR016032|IPR029016 GAF domain-like|Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF00196|PR00038|PS00622|SM00421|SSF46894|SSF55781 BKD09_RS31585 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009075|IPR009100|IPR013107|IPR013786 Acyl-CoA dehydrogenase, C-terminal domain|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF02771|PF08028|PIRSF016578|SSF47203|SSF56645 BKD09_RS31590 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005025|IPR029039 Flavoprotein-like domain|NADPH-dependent FMN reductase-like GO:0016491 G3DSA:3.40.50.360|PF03358|SSF52218 BKD09_RS31595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|PR00111|SSF53474 BKD09_RS31600 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 BKD09_RS31605 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS31610 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR011991 Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF00126|SSF46785 BKD09_RS31615 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000634|IPR001216|IPR001926 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site|Serine/threonine dehydratase, pyridoxal-phosphate-binding site|Tryptophan synthase beta subunit-like PLP-dependent enzyme GO:0006520|GO:0006535|GO:0030170 G3DSA:3.40.50.1100|PF00291|PS00165|PS00901|SSF53686 BKD09_RS31625 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015590|IPR016160|IPR016161|IPR016162|IPR016163|IPR029510 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|PS00687|SSF53720 BKD09_RS31630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018912 Protein of unknown function DUF2478 PF10649 BKD09_RS31635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018060|IPR018062 DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PF12833|PS00041|SM00342 BKD09_RS31640 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005134|IPR020761|IPR020765 Uncharacterised protein family UPF0114|Uncharacterised protein family UPF0114, bacteria|Uncharacterised protein family UPF0114, gammaproteobacteria GO:0005886 MF_00143|PF03350|TIGR00645 BKD09_RS31645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005496|IPR022301 Integral membrane protein TerC|Integral membrane protein YjbE GO:0016021 PF03741|TIGR03717 BKD09_RS31655 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007791|IPR029024 Co-chaperone DjlA, N-terminal|TerB-like G3DSA:1.10.3680.10|PF05099|SSF158682 BKD09_RS31660 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009959|IPR032710 NTF2-like domain|Polyketide cyclase SnoaL-like domain G3DSA:3.10.450.50|PF12680|SSF54427 BKD09_RS31665 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001041|IPR001221|IPR001433|IPR005163|IPR005302|IPR008333|IPR011037|IPR012675|IPR015808|IPR017938 2Fe-2S ferredoxin-type iron-sulfur binding domain|3-alpha domain|Beta-grasp domain|Molybdenum cofactor sulfurase, C-terminal|Molybdenum cofactor sulfurase, C-terminal-like|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Phenol hydroxylase reductase|Pyruvate kinase-like, insert domain|Riboflavin synthase-like beta-barrel GO:0003824|GO:0009055|GO:0016491|GO:0030151|GO:0030170|GO:0051536|GO:0055114 G3DSA:2.40.30.10|G3DSA:2.40.33.20|G3DSA:3.10.20.30|G3DSA:3.40.50.80|PF00111|PF00175|PF00970|PF03473|PF03475|PR00410|SSF50800|SSF52343|SSF54292|SSF63380 BKD09_RS31670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000866|IPR012336 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF00578|SSF52833 BKD09_RS31675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR004839|IPR011991|IPR015421|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0003824|GO:0006355|GO:0009058|GO:0030170 G3DSA:1.10.10.10|G3DSA:3.40.640.10|PF00155|PF00392|PR00035|SM00345|SSF46785|SSF53383 BKD09_RS31680 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007396|IPR012349 FMN-binding split barrel|Transcriptional regulator PAI 2-type GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF04299|PIRSF010372|SSF50475 BKD09_RS31695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR026869|IPR029055 Nucleophile aminohydrolases, N-terminal|Putative glutamine amidotransferase type 2 G3DSA:3.60.20.10|PF13230|SSF56235 BKD09_RS31700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006336|IPR011793 Glutamate--cysteine ligase, GCS2|Putative glutamate--cysteine ligase YbdK GO:0004357|GO:0016879|GO:0042398 MF_01609|PF04107|SSF55931|TIGR02050 BKD09_RS31720 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025711 PepSY domain PF13670 BKD09_RS31740 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR002410|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Peptidase S33 GO:0006508|GO:0008233 G3DSA:3.40.50.1820|PF00561|PR00111|PR00793|SSF53474 BKD09_RS31745 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007760|IPR009078|IPR010287|IPR012347 Domain of unknown function DUF892|Ferritin-like superfamily|Ferritin-related|Manganese catalase G3DSA:1.20.1260.10|PF05067|PF05974|SSF47240 BKD09_RS31750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004099|IPR006324|IPR012999|IPR016156|IPR023753 FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Glutathione-disulphide reductase|Pyridine nucleotide-disulphide oxidoreductase, class I, active site|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0004362|GO:0006749|GO:0016491|GO:0016668|GO:0045454|GO:0050660|GO:0050661|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF02852|PF07992|PIRSF000350|PR00368|PR00411|PS00076|SSF51905|SSF55424|TIGR01424 BKD09_RS31755 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018637 Domain of unknown function DUF2059 PF09832 BKD09_RS31760 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004788|IPR020672 Ribose 5-phosphate isomerase, type A|Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 G3DSA:3.30.70.260|G3DSA:3.40.50.1360|MF_00170|PF06026|SSF100950|SSF75445|TIGR00021 BKD09_RS31765 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006346|IPR006439|IPR023198|IPR023214 2-phosphoglycolate phosphatase, prokaryotic|HAD hydrolase, subfamily IA|HAD-like domain|Phosphoglycolate phosphatase, domain 2 GO:0008152|GO:0008967|GO:0016787|GO:0046295 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|SSF56784|TIGR01449|TIGR01549 BKD09_RS31775 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000385|IPR006638|IPR007197|IPR010505|IPR013483|IPR013785 Aldolase-type TIM barrel|Elongator protein 3/MiaB/NifB|MoaA/nifB/pqqE, iron-sulphur binding, conserved site|Molybdenum cofactor biosynthesis protein A|Molybdenum cofactor synthesis C-terminal|Radical SAM GO:0003824|GO:0006777|GO:0019008|GO:0046872|GO:0051536|GO:0051539 G3DSA:3.20.20.70|MF_01225_B|PF04055|PF06463|PF13353|PS01305|SM00729|SSF102114|TIGR02666 BKD09_RS31780 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290 BKD09_RS31785 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PF06808 BKD09_RS31790 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001261|IPR002933|IPR011650|IPR017150 ArgE/DapE/ACY1/CPG2/YscS, conserved site|Peptidase M20|Peptidase M20, dimerisation domain|Peptidase M20, glutamate carboxypeptidase GO:0006508|GO:0008152|GO:0008237|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PIRSF037238|PS00758|SSF53187|SSF55031 BKD09_RS31795 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003594|IPR003661|IPR004358|IPR013727 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Two-component sensor kinase, N-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF02518|PF08521|PR00344|SM00387|SM00388|SSF47384|SSF55874 BKD09_RS31800 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR001867|IPR011006|IPR011991 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF52172 BKD09_RS31805 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007487|IPR028082 ABC transporter, substrate-binding protein|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF04392|SSF53822 BKD09_RS31810 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR003660|IPR029787|IPR033479 Adenylyl cyclase class-3/4/guanylyl cyclase|Double Cache domain 1|HAMP domain|Nucleotide cyclase GO:0004871|GO:0007165|GO:0009190|GO:0016021|GO:0016849|GO:0035556 G3DSA:3.30.450.20|G3DSA:3.30.70.1230|PF00211|PF00672|PF02743|SM00044|SM00304|SSF158472|SSF55073 BKD09_RS31815 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006674 HD domain G3DSA:1.10.3210.10|SSF109604 BKD09_RS31820 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001375|IPR029058 Alpha/Beta hydrolase fold|Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 G3DSA:3.40.50.1820|PF00326|SSF53474 BKD09_RS31830 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018389|IPR019546|IPR026289 Solute binding protein, mannitol/chloroaromatic system-like|TRAP transporter solute receptor DctP/TeaA|Twin-arginine translocation pathway, signal sequence, bacterial/archaeal GO:0006810|GO:0030288 PF03480|PF10518|PIRSF039026|SSF53850 BKD09_RS31835 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000808|IPR002744|IPR019591|IPR027417 Domain of unknown function DUF59|Mrp, conserved site|Mrp/NBP35 ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|MF_02040|PF01883|PF10609|PS01215|SSF117916|SSF52540 BKD09_RS31840 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|SSF54593 BKD09_RS31845 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002204|IPR006115|IPR008927|IPR013328|IPR015815|IPR016040|IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain|3-hydroxyisobutyrate dehydrogenase-related|3-hydroxyisobutyrate dehydrogenase-related, conserved site|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, NADP-binding|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0004616|GO:0016491|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF03446|PF14833|PIRSF000103|PS00895|SSF48179|SSF51735 BKD09_RS31850 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 PF03600 BKD09_RS31855 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF02518|PR00344|SM00387|SM00388|SSF47384|SSF55874 BKD09_RS31865 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011969|IPR021109 Aspartic peptidase domain|Clan AA aspartic peptidase, C-terminal PF13975|SSF50630|TIGR02281 BKD09_RS31870 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 BKD09_RS31875 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001269|IPR004653|IPR013785|IPR018517 Aldolase-type TIM barrel|tRNA-dihydrouridine synthase|tRNA-dihydrouridine synthase, conserved site|tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0003824|GO:0008033|GO:0017150|GO:0050660|GO:0055114 G3DSA:3.20.20.70|MF_02041|PF01207|PIRSF006621|PS01136|SSF51395|TIGR00742 BKD09_RS31880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002523|IPR004488 Magnesium/cobalt transport protein CorA|Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020|GO:0030001|GO:0046873|GO:0055085 G3DSA:1.20.58.340|G3DSA:3.30.460.20|PF01544|SSF143865|SSF144083|TIGR00383 BKD09_RS31885 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025201 Sensor protein KdpD, transmembrane domain G3DSA:1.20.120.620|PF13493 BKD09_RS31900 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003423|IPR010130 Outer membrane efflux protein|Type I secretion outer membrane protein, TolC GO:0005215|GO:0006810|GO:0019867 G3DSA:1.20.1600.10|PF02321|SSF56954|TIGR01844 BKD09_RS31905 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001036|IPR004763|IPR027463 Acriflavin resistance protein|Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0006812|GO:0008324|GO:0016020|GO:0016021 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|SSF82693|SSF82714|SSF82866|TIGR00914 BKD09_RS31910 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:1.20.1600.10|G3DSA:2.40.50.100|PF16576|SSF111369|TIGR01730 BKD09_RS31915 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 BKD09_RS31920 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011486 Putative beta-barrel porin-2, OmpL-like. bbp2 PF07642 BKD09_RS31930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003594|IPR003661|IPR004358|IPR025201 Histidine kinase-like ATPase, C-terminal domain|Sensor protein KdpD, transmembrane domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:1.20.120.620|G3DSA:3.30.565.10|PF00512|PF02518|PF13493|PR00344|SM00387|SM00388|SSF47384|SSF55874 BKD09_RS31935 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR001867|IPR011006|IPR011991 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF52172 BKD09_RS31940 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 BKD09_RS31960 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain G3DSA:3.30.70.20|PF13187|PS00198|SSF54862 BKD09_RS31965 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003953|IPR015939|IPR023753|IPR030664 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain|Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal|Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit GO:0016491|GO:0055114 G3DSA:1.20.58.100|G3DSA:3.50.50.60|PF00890|PF02910|PIRSF000171|PR00368|PR00411|SSF46977|SSF51905 BKD09_RS31970 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004872 Lipoprotein NlpA family G3DSA:3.40.190.10|PF03180|PIRSF002854|SSF53850|TIGR00363 BKD09_RS31980 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004872 Lipoprotein NlpA family G3DSA:3.40.190.10|PF03180|SSF53850 BKD09_RS31985 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000277|IPR006235|IPR015421|IPR015422|IPR015424 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme|O-acetylhomoserine/O-acetylserine sulfhydrylase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0006520|GO:0016765|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01053|PIRSF001434|SSF53383|TIGR01326 BKD09_RS31990 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011251|IPR016215 Luciferase-like domain|Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497|GO:0016705|GO:0055114 G3DSA:3.20.20.30|PF00296|PIRSF000337|SSF51679|TIGR03860 BKD09_RS31995 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS32000 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005829|IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain|Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PS00216|SSF103473 BKD09_RS32005 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001638|IPR010067|IPR015168 Aliphatic sulfonates-binding protein|Solute-binding protein family 3/N-terminal domain of MltF|SsuA/THI5-like GO:0006790|GO:0006810|GO:0016020 G3DSA:3.40.190.10|PF09084|SM00062|SSF53850|TIGR01728 BKD09_RS32010 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540 BKD09_RS32015 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS32020 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PF00528|SSF161098 BKD09_RS32025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|SSF53850 BKD09_RS32030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011251|IPR016215 Luciferase-like domain|Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497|GO:0016705|GO:0055114 G3DSA:3.20.20.30|PF00296|PIRSF000337|SSF51679|TIGR03860 BKD09_RS32035 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011251 Luciferase-like domain GO:0016705|GO:0055114 G3DSA:3.20.20.30|PF00296|SSF51679 BKD09_RS32040 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS32045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS32050 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001638|IPR015168 Solute-binding protein family 3/N-terminal domain of MltF|SsuA/THI5-like G3DSA:3.40.190.10|PF09084|SM00062|SSF53850 BKD09_RS32055 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009075|IPR009100|IPR013107|IPR013786 Acyl-CoA dehydrogenase, C-terminal domain|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF08028|PIRSF016578|SSF47203|SSF56645 BKD09_RS32060 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002563|IPR012349 FMN-binding split barrel|Flavin reductase like domain GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF01613|SM00903|SSF50475 BKD09_RS32065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001451|IPR011004 Hexapeptide repeat|Trimeric LpxA-like G3DSA:1.10.3130.10|G3DSA:2.160.10.10|PF00132|SSF51161 BKD09_RS32070 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS32075 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS32080 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015168 SsuA/THI5-like G3DSA:3.40.190.10|PF09084|SSF53850 BKD09_RS32085 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 G3DSA:3.60.130.10|PF02668|SSF51197 BKD09_RS32090 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF07992|SSF51905 BKD09_RS32095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|SSF53335 BKD09_RS32100 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011251|IPR016215 Luciferase-like domain|Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497|GO:0016705|GO:0055114 G3DSA:3.20.20.30|PF00296|PIRSF000337|SSF51679|TIGR03860 BKD09_RS32105 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004872 Lipoprotein NlpA family G3DSA:3.40.190.10|PF03180|SSF53850 BKD09_RS32115 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000485|IPR011008|IPR011991|IPR019885|IPR019887|IPR019888 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Transcription regulator HTH, AsnC-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13412|PR00033|PS00519|SM00344|SSF46785|SSF54909 BKD09_RS32125 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|SSF53850 BKD09_RS32130 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS32135 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS32140 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540 BKD09_RS32145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021365 Protein of unknown function DUF2891 PF11199 BKD09_RS32155 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS32160 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025870|IPR029068 Glyoxalase-like domain|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase G3DSA:3.10.180.10|PF12681|SSF54593 BKD09_RS32165 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001303 Class II aldolase/adducin N-terminal G3DSA:3.40.225.10|PF00596|SM01007|SSF53639 BKD09_RS32170 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006140|IPR016040 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|NAD(P)-binding domain GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF02826|SSF51735 BKD09_RS32180 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000172|IPR007867|IPR023753 FAD/NAD(P)-binding domain|Glucose-methanol-choline oxidoreductase, C-terminal|Glucose-methanol-choline oxidoreductase, N-terminal GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.30.560.10|G3DSA:3.50.50.60|PF00732|PF05199|SSF51905|SSF54373 BKD09_RS32185 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005828|IPR005829|IPR020846 Major facilitator superfamily domain|Major facilitator, sugar transporter-like|Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1250.20|PF00083|PS00216|PS00217|SSF103473 BKD09_RS32190 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001753|IPR014748|IPR029045 ClpP/crotonase-like domain|Crontonase, C-terminal|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:1.10.12.10|G3DSA:3.90.226.10|PF00378|SSF52096 BKD09_RS32195 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801 BKD09_RS32200 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001041|IPR002888|IPR006058|IPR012675 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|[2Fe-2S]-binding GO:0009055|GO:0016491|GO:0046872|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.150.120|G3DSA:3.10.20.30|PF00111|PF01799|PS00197|SSF47741|SSF54292 BKD09_RS32205 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002346|IPR005107|IPR016166|IPR016167|IPR016169 CO dehydrogenase flavoprotein, C-terminal|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|Molybdopterin dehydrogenase, FAD-binding GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.30.390.50|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF00941|PF03450|SM01092|SSF55447|SSF56176 BKD09_RS32210 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000674|IPR008274|IPR010419|IPR023393 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding|Carbon monoxide dehydrogenase subunit G|START-like domain GO:0016491|GO:0055114 G3DSA:3.30.365.10|G3DSA:3.30.530.20|G3DSA:3.90.1170.50|PF01315|PF02738|PF06240|SM01008|SSF54665|SSF55961|SSF56003 BKD09_RS32215 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR018060|IPR018062 DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PS00041|SM00342|SSF46689 BKD09_RS32220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002830|IPR012349 FMN-binding split barrel|UbiD decarboxylyase family GO:0010181|GO:0016491|GO:0016831|GO:0055114 G3DSA:3.40.1670.10|PF01977|SSF143968|SSF50475|TIGR00148 BKD09_RS32225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003382|IPR004507 Flavin prenyltransferase UbiX/Pad1|Flavoprotein GO:0003824 G3DSA:3.40.50.1950|MF_01984|PF02441|SSF52507|TIGR00421 BKD09_RS32230 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS32235 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 BKD09_RS32240 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011051|IPR013096|IPR014710|IPR017627 Conserved hypothetical protein CHP03214, putative allantoin-urate catabolism protein|Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182|TIGR03214 BKD09_RS32245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007247|IPR011051|IPR024060 RmlC-like cupin domain|Ureidoglycolate lyase|Ureidoglycolate lyase domain GO:0000256|GO:0004848|GO:0050385 G3DSA:2.60.120.480|PF04115|PIRSF017306|SSF51182 BKD09_RS32250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001991|IPR018107 Sodium:dicarboxylate symporter|Sodium:dicarboxylate symporter, conserved site GO:0015293|GO:0016021 G3DSA:1.10.3860.10|PF00375|PR00173|PS00714|SSF118215 BKD09_RS32255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS32260 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS32265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032710 NTF2-like domain G3DSA:3.10.450.50|PF12893|SSF54427 BKD09_RS32270 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|SM00849|SSF56281 BKD09_RS32275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006175|IPR013813 Endoribonuclease L-PSP/chorismate mutase-like|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|SSF55298 BKD09_RS32280 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006089|IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase, conserved site|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PS00072|SSF47203|SSF56645 BKD09_RS32285 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001155|IPR002938|IPR013785|IPR023753 Aldolase-type TIM barrel|FAD-binding domain|FAD/NAD(P)-binding domain|NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0003824|GO:0010181|GO:0016491|GO:0055114|GO:0071949 G3DSA:3.20.20.70|G3DSA:3.50.50.60|PF00724|PF01494|PR00420|SSF51395|SSF51905 BKD09_RS32290 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|SM00347|SSF46785 BKD09_RS32295 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801 BKD09_RS32300 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS32305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 G3DSA:3.50.30.50|PF04199|SSF102198 BKD09_RS32310 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR002878|IPR012340|IPR016040|IPR022002 Domain of unknown function DUF35, OB-fold, C-terminal|Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal|NAD(P)-binding domain|Nucleic acid-binding, OB-fold|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF00106|PF01796|PF12172|PR00081|SSF50249|SSF51735 BKD09_RS32315 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002155|IPR016039 Thiolase|Thiolase-like GO:0003824|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PIRSF000429|SSF53901 BKD09_RS32320 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003718|IPR015946|IPR019953 K homology domain-like, alpha/beta|Organic hydroperoxide resistance protein famiy|OsmC/Ohr family GO:0006979 G3DSA:2.20.25.10|G3DSA:3.30.300.20|PF02566|SSF82784|TIGR03561 BKD09_RS32330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS32335 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS32340 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851|IPR003439|IPR003593|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter, permease|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005215|GO:0005524|GO:0006810|GO:0016020|GO:0016887 G3DSA:3.40.50.300|PF00005|PF02653|PF12399|SM00382|SSF52540 BKD09_RS32345 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS32350 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR001660|IPR011990|IPR013761|IPR027417|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|Nucleotide cyclase|P-loop containing nucleoside triphosphate hydrolase|Sterile alpha motif domain|Sterile alpha motif/pointed domain|Tetratricopeptide-like helical domain GO:0005515|GO:0009190|GO:0016849|GO:0035556 G3DSA:1.10.150.50|G3DSA:1.25.40.10|G3DSA:3.30.70.1230|G3DSA:3.40.50.300|PF00211|PF00536|PF13191|SM00044|SM00454|SSF47769|SSF48452|SSF52540|SSF55073 BKD09_RS32355 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002641|IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase|Patatin/Phospholipase A2-related GO:0006629|GO:0008152 PF01734|SSF52151 BKD09_RS32370 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009506 Protein of unknown function DUF1127 PF06568 BKD09_RS32380 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006045|IPR011051|IPR014710|IPR017774 Bicupin, oxalate decarboxylase/oxidase|Cupin 1|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0033609|GO:0045735 G3DSA:2.60.120.10|PF00190|SM00835|SSF51182|TIGR03404 BKD09_RS32385 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000390 Small multidrug resistance protein family GO:0016021 PF00893|SSF103481 BKD09_RS32390 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003779|IPR004675|IPR029032 AhpD-like|Alkylhydroperoxidase AhpD core|Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 G3DSA:1.20.1290.10|PF02627|SSF69118|TIGR00778 BKD09_RS32395 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR004839|IPR011991|IPR015421|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0003824|GO:0006355|GO:0009058|GO:0030170 G3DSA:1.10.10.10|G3DSA:3.40.640.10|PF00155|PF00392|SM00345|SSF46785|SSF53383 BKD09_RS32400 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003680|IPR023048|IPR029039 Flavodoxin-like fold|Flavoprotein-like domain|NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 G3DSA:3.40.50.360|MF_01216|PF02525|SSF52218 BKD09_RS32405 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001867|IPR003593|IPR011990|IPR011991|IPR016032|IPR027417 AAA+ ATPase domain|OmpR/PhoB-type DNA-binding domain|P-loop containing nucleoside triphosphate hydrolase|Signal transduction response regulator, C-terminal effector|Tetratricopeptide-like helical domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0005515|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.25.40.10|G3DSA:3.40.50.300|PF00486|PR00364|SM00382|SM00862|SSF46894|SSF52540 BKD09_RS32410 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR000639|IPR023594|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Epoxide hydrolase-like|Haloalkane dehalogenase, subfamily 2 GO:0003824|GO:0018786 G3DSA:3.40.50.1820|MF_01231|PF00561|PR00412|SSF53474 BKD09_RS32415 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029010|IPR029062 Class I glutamine amidotransferase-like|ThuA-like domain G3DSA:3.40.50.880|PF06283|SSF52317 BKD09_RS32425 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007492 LytTR DNA-binding domain GO:0003677 G3DSA:2.40.50.40|PF04397|SM00850 BKD09_RS32430 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001375|IPR016986|IPR029058 Alpha/Beta hydrolase fold|Peptidase S9, prolyl oligopeptidase, catalytic domain|Uncharacterised conserved protein UCP031982, alpha/beta hydrolase, XabL GO:0006508|GO:0008236 G3DSA:3.40.50.1820|PF00326|PIRSF031982|SSF53474 BKD09_RS32435 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008490|IPR025668 Transposase DDE domain|Transposase InsH, N-terminal PF05598|PF13751 BKD09_RS32455 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase G3DSA:3.10.180.10|SSF54593 BKD09_RS32460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR011681 GcrA cell cycle regulator|Homeodomain-like GO:0003677 G3DSA:1.10.10.60|PF07750 BKD09_RS32465 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004045|IPR010987|IPR012336 Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF02798|SSF47616|SSF52833 BKD09_RS32475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011008 Dimeric alpha-beta barrel SSF54909 BKD09_RS32480 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009923|IPR025543 Dodecin|Dodecin-like G3DSA:3.30.1660.10|PF07311|SSF89807 BKD09_RS32485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014710 RmlC-like jelly roll fold G3DSA:2.60.120.10 BKD09_RS32490 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011008 Dimeric alpha-beta barrel G3DSA:3.30.70.900|SSF54909 BKD09_RS32495 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006683|IPR029069 HotDog domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|SSF54637 BKD09_RS32500 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 G3DSA:3.90.850.10|PF01557|SSF56529 BKD09_RS32505 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 BKD09_RS32510 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000132|IPR003010 Carbon-nitrogen hydrolase|Nitrilase/cyanide hydratase, conserved site GO:0006807|GO:0016810 G3DSA:3.60.110.10|PF00795|PS00920|SSF56317 BKD09_RS32515 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011766|IPR029061 Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 G3DSA:3.40.50.970|PF02775|SSF52518 BKD09_RS32520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 G3DSA:3.40.920.10|PF01558 BKD09_RS32525 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000835|IPR011991|IPR023187 MarR-type HTH domain|Transcriptional regulator MarR-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12802|PR00598|PS01117|SM00347|SSF46785 BKD09_RS32530 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000835|IPR011991|IPR023187 MarR-type HTH domain|Transcriptional regulator MarR-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12802|PR00598|PS01117|SM00347|SSF46785 BKD09_RS32535 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SSF51735 BKD09_RS32540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801 BKD09_RS32545 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000391|IPR032710 NTF2-like domain|Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 G3DSA:3.10.450.50|PF00866|SSF54427 BKD09_RS32550 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001663|IPR015879|IPR017941 Aromatic-ring-hydroxylating dioxygenase, alpha subunit|Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain|Rieske [2Fe-2S] iron-sulphur domain GO:0005506|GO:0006725|GO:0016491|GO:0016708|GO:0019439|GO:0051537|GO:0055114 G3DSA:2.102.10.10|G3DSA:3.90.380.10|PF00355|PF00848|PR00090|SSF50022|SSF55961 BKD09_RS32555 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000951|IPR001041|IPR001433|IPR006058|IPR012675|IPR017938 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|Oxidoreductase FAD/NAD(P)-binding|Phthalate dioxygenase reductase|Riboflavin synthase-like beta-barrel GO:0009055|GO:0016491|GO:0051536|GO:0051537|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.10.20.30|G3DSA:3.40.50.80|PF00111|PF00175|PR00409|PS00197|SSF52343|SSF54292|SSF63380 BKD09_RS32560 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011614|IPR020835 Catalase core domain|Catalase-like domain GO:0004096|GO:0020037|GO:0055114 G3DSA:2.40.180.10|PF00199|SM01060|SSF56634 BKD09_RS32565 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR018060|IPR018062 DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PS00041|SM00342|SSF46689 BKD09_RS32570 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR018060|IPR020449 DNA binding HTH domain, AraC-type|Homeodomain-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PR00032|SM00342|SSF46689 BKD09_RS32575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR018060|IPR018062|IPR020449 DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PR00032|PS00041|SM00342|SSF46689 BKD09_RS32580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000103|IPR023753 FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF07992|PR00368|PR00469|SSF51905 BKD09_RS32585 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010451|IPR023375|IPR023653 Acetoacetate decarboxylase|Acetoacetate decarboxylase beta barrel domain|Acetoacetate decarboxylase, bacterial GO:0016829|GO:0016831 G3DSA:2.40.400.10|MF_00597|PF06314|SSF160104 BKD09_RS32590 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002641|IPR016035|IPR021095 Acyl transferase/acyl hydrolase/lysophospholipase|Patatin/Phospholipase A2-related|Protein of unknown function DUF3734 GO:0006629|GO:0008152 G3DSA:3.40.1090.10|PF01734|PF12536|SSF52151 BKD09_RS32595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003997|IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain|RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 G3DSA:2.40.50.100|PF16576|PR01490|SSF111369 BKD09_RS32600 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004638|IPR011701|IPR020846 Drug resistance transporter EmrB/QacA subfamily|Major facilitator superfamily|Major facilitator superfamily domain GO:0006810|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473|TIGR00711 BKD09_RS32605 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR011294|IPR016040|IPR020904 3-hydroxybutyrate dehydrogenase|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0003858|GO:0016491|GO:0055114 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SSF51735|TIGR01963 BKD09_RS32610 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010699 Protein of unknown function DUF1275 PF06912 BKD09_RS32615 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 G3DSA:3.10.310.10|PF02567|PIRSF016184|SSF54506|TIGR00654 BKD09_RS32625 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR018060|IPR018062|IPR020449 DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PR00032|PS00041|SM00342|SSF46689 BKD09_RS32630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR001610|IPR003594|IPR003661|IPR004358|IPR013767 Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0006355|GO:0007165|GO:0016310|GO:0016772 G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF00989|PF02518|PF13426|PR00344|SM00086|SM00091|SM00387|SM00388|SSF47384|SSF55785|SSF55874|TIGR00229 BKD09_RS32635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PS00622|SM00421|SM00448|SSF46894|SSF52172 BKD09_RS32640 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 BKD09_RS32645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 PF04632 BKD09_RS32650 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012451 Protein of unknown function DUF1656 PF07869 BKD09_RS32655 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:2.40.50.100|PF13533|SSF111369 BKD09_RS32660 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR018060|IPR018062 DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PS00041|SM00342|SSF46689 BKD09_RS32665 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001227|IPR016035|IPR016036|IPR020801 Acyl transferase domain|Acyl transferase/acyl hydrolase/lysophospholipase|Malonyl-CoA ACP transacylase, ACP-binding|Polyketide synthase, acyl transferase domain GO:0003824|GO:0008152|GO:0016740 G3DSA:3.30.70.250|G3DSA:3.40.366.10|SM00827|SSF52151|SSF55048 BKD09_RS32670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004776 Membrane transport protein GO:0016021|GO:0055085 PF03547 BKD09_RS32675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002736|IPR017555 Triphosphoribosyl-dephospho-CoA protein|Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MF_01883|PF01874|TIGR03132 BKD09_RS32680 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 PF10620|TIGR03135 BKD09_RS32685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009648|IPR011763|IPR029045 Acetyl-coenzyme A carboxyltransferase, C-terminal|Biotin-dependent malonate decarboxylase, gamma subunit|ClpP/crotonase-like domain GO:0016874|GO:0044262 G3DSA:3.90.226.10|PF06833|SSF52096|TIGR03134 BKD09_RS32690 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000022|IPR000438|IPR017556|IPR029045 Acetyl-CoA carboxylase carboxyl transferase, beta subunit|Biotin-independent malonate decarboxylase, beta subunit|Carboxyl transferase|ClpP/crotonase-like domain GO:0003989|GO:0006633|GO:0009317|GO:0016831|GO:0044262 G3DSA:3.90.226.10|PF01039|PR01070|SSF52096|TIGR03133 BKD09_RS32695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009662|IPR023439 Malonate decarboxylase delta subunit|Malonate decarboxylase/citrate lyase acyl carrier protein MF_00710|PD015450|PF06857|TIGR03130 BKD09_RS32700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005777 Acetyl-S-ACP:malonate ACP transferase G3DSA:3.40.1080.10|G3DSA:3.40.810.20|PF16957|SSF100950|TIGR01110 BKD09_RS32705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|SM00849|SSF56281 BKD09_RS32710 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|SSF53474 BKD09_RS32725 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF13533|SSF111369|TIGR01730 BKD09_RS32730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|SSF82693|SSF82714|SSF82866 BKD09_RS32735 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006683|IPR025540|IPR029069 Fluoroacetyl-CoA thioesterase|HotDog domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|PIRSF014972|SSF54637 BKD09_RS32740 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR001610|IPR003594|IPR003661|IPR004358|IPR013655 Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold-3|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0005515|GO:0007165|GO:0016310|GO:0016772 G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF02518|PF08447|PR00344|SM00086|SM00387|SM00388|SSF47384|SSF55785|SSF55874|TIGR00229 BKD09_RS32745 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006656|IPR006657|IPR009010|IPR010046 Aspartate decarboxylase-like domain|Molybdopterin dinucleotide-binding domain|Molybdopterin oxidoreductase|Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0016491|GO:0030151|GO:0051539|GO:0055114 G3DSA:2.40.40.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|PF00384|PF01568|PIRSF000144|SSF50692|SSF53706|TIGR01701 BKD09_RS32750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006045|IPR011051|IPR014710|IPR017774 Bicupin, oxalate decarboxylase/oxidase|Cupin 1|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0033609|GO:0045735 G3DSA:2.60.120.10|PF00190|SM00835|SSF51182|TIGR03404 BKD09_RS32755 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 PF02322|TIGR00203 BKD09_RS32760 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 PF01654|PIRSF006446 BKD09_RS32765 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006231|IPR023753 FAD/NAD(P)-binding domain|Malate:quinone-oxidoreductase GO:0006099|GO:0008924|GO:0016491|GO:0055114 G3DSA:3.50.50.60|MF_00212|PF06039|SSF51905|TIGR01320 BKD09_RS32770 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011051|IPR014710 RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|SSF51182 BKD09_RS32775 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011051|IPR014710 RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|SSF51182 BKD09_RS32780 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000362|IPR005677|IPR008948|IPR018951|IPR020557|IPR022761|IPR024083 Fumarase C, C-terminal|Fumarase/histidase, N-terminal|Fumarate hydratase, class II|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0004333|GO:0006099|GO:0006106|GO:0016829|GO:0045239 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|MF_00743|PF00206|PF10415|PR00149|PS00163|SSF48557|TIGR00979 BKD09_RS32785 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010699 Protein of unknown function DUF1275 PF06912 BKD09_RS32790 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003786|IPR016193 Cytidine deaminase-like|Protein FdhD GO:0003824|GO:0016783 G3DSA:3.10.20.10|G3DSA:3.40.140.10|MF_00187|PF02634|PIRSF015626|SSF53927|TIGR00129 BKD09_RS32795 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005325 Protein of unknown function DUF308, membrane PF03729 BKD09_RS32800 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003594|IPR011495 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain G3DSA:3.30.565.10|PF07568|SSF55874 BKD09_RS32805 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002177|IPR008331|IPR009078|IPR012347 DNA-binding protein Dps|Ferritin-like superfamily|Ferritin-related|Ferritin/DPS protein domain GO:0006879|GO:0006950|GO:0008199|GO:0055114 G3DSA:1.20.1260.10|PF00210|PIRSF005900|PR01346|SSF47240 BKD09_RS32810 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011577|IPR016174 Cytochrome b561, bacterial/Ni-hydrogenase|Di-haem cytochrome, transmembrane GO:0009055|GO:0016020|GO:0016021|GO:0022904 G3DSA:1.20.950.20|PF01292|SSF81342 BKD09_RS32815 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011614|IPR020835|IPR024168 Catalase core domain|Catalase, SrpA-type, predicted|Catalase-like domain GO:0004096|GO:0020037|GO:0055114 G3DSA:2.40.180.10|PF00199|PIRSF000296|SSF56634 BKD09_RS32820 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF00106|PR00081|SSF51735 BKD09_RS32825 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001867|IPR011990|IPR011991|IPR016032|IPR027417 OmpR/PhoB-type DNA-binding domain|P-loop containing nucleoside triphosphate hydrolase|Signal transduction response regulator, C-terminal effector|Tetratricopeptide-like helical domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0005515|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.25.40.10|G3DSA:3.40.50.300|PF00486|PR00364|SM00862|SSF46894|SSF48452|SSF52540 BKD09_RS32830 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001867|IPR003593|IPR011990|IPR011991|IPR016032|IPR027417 AAA+ ATPase domain|OmpR/PhoB-type DNA-binding domain|P-loop containing nucleoside triphosphate hydrolase|Signal transduction response regulator, C-terminal effector|Tetratricopeptide-like helical domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0005515|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.25.40.10|G3DSA:3.40.50.300|PF00486|PF13401|PR00364|SM00862|SSF46894|SSF48452|SSF52540 BKD09_RS32845 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS32855 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR018060|IPR018062|IPR020449 DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PR00032|PS00041|SM00342|SSF46689 BKD09_RS32860 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001867|IPR011990|IPR011991|IPR016032|IPR027417 OmpR/PhoB-type DNA-binding domain|P-loop containing nucleoside triphosphate hydrolase|Signal transduction response regulator, C-terminal effector|Tetratricopeptide-like helical domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0005515|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.25.40.10|G3DSA:3.40.50.300|PF00486|PR00364|SM00862|SSF46894|SSF48452|SSF52540 BKD09_RS32865 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000709|IPR028081|IPR028082 Leu/Ile/Val-binding protein|Leucine-binding protein domain|Periplasmic binding protein-like I GO:0006865 G3DSA:3.40.50.2300|PF13458|PR00337|SSF53822 BKD09_RS32875 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|SSF111369|TIGR01730 BKD09_RS32880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|SSF82693|SSF82714|SSF82866 BKD09_RS32885 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000943|IPR007627|IPR007630|IPR011991|IPR012759|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor RpoH, proteobacteria|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 4|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.601.10|PF04542|PF04545|PR00046|PS00716|SSF88659|SSF88946|TIGR02392|TIGR02937 BKD09_RS32890 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003594|IPR003660|IPR003661|IPR004358 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PR00344|SM00304|SM00387|SM00388|SSF47384|SSF55874 BKD09_RS32895 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR001867|IPR011006|IPR011991 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF52172 BKD09_RS32915 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001347|IPR005855|IPR029055 Glucosamine-fructose-6-phosphate aminotransferase, isomerising|Nucleophile aminohydrolases, N-terminal|Sugar isomerase (SIS) GO:0004360|GO:0005975|GO:0030246|GO:1901137 G3DSA:3.40.50.10490|G3DSA:3.60.20.10|MF_00164|PF01380|PF13522|SSF53697|SSF56235|TIGR01135 BKD09_RS32920 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023210 NADP-dependent oxidoreductase domain G3DSA:3.20.20.100|PF00248|SSF51430 BKD09_RS32925 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001509|IPR008089|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain|Nucleotide sugar epimerase GO:0003824|GO:0005975|GO:0016857|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|PR01713|SSF51735 BKD09_RS32935 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00196|PR00038|PS00622|SM00421|SSF46894|SSF52172 BKD09_RS32940 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00196|PR00038|PS00622|SM00421|SSF46894|SSF52172 BKD09_RS32945 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011042 Six-bladed beta-propeller, TolB-like G3DSA:2.120.10.30|SSF82171 BKD09_RS32950 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|SSF53448 BKD09_RS32955 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006342|IPR029063 Methyltransferase FkbM|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF05050|SSF53335|TIGR01444 BKD09_RS32960 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic PF13440 BKD09_RS32965 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001031|IPR029058 Alpha/Beta hydrolase fold|Thioesterase GO:0009058|GO:0016788 G3DSA:3.40.50.1820|PF00975|SSF53474 BKD09_RS32970 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003694|IPR014729|IPR022310|IPR022926 NAD(+) synthetase|NAD/GMP synthase|NH(3)-dependent NAD(+) synthetase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003952|GO:0005524|GO:0008795|GO:0009435 G3DSA:3.40.50.620|MF_00193|PF02540|SSF52402|TIGR00552 BKD09_RS32975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001962|IPR006426|IPR014729|IPR017932|IPR029055 Asparagine synthase|Asparagine synthase, glutamine-hydrolyzing|Glutamine amidotransferase type 2 domain|Nucleophile aminohydrolases, N-terminal|Rossmann-like alpha/beta/alpha sandwich fold GO:0004066|GO:0006529 G3DSA:3.40.50.620|G3DSA:3.60.20.10|PF00733|PF13537|PIRSF001589|SSF52402|SSF56235|TIGR01536 BKD09_RS32980 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801 BKD09_RS32985 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009081 Phosphopantetheine binding ACP domain G3DSA:1.10.1200.10|PF00550|SSF47336 BKD09_RS32990 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005835|IPR029044 Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain GO:0009058|GO:0016779 G3DSA:3.90.550.10|PF00483|SSF53448 BKD09_RS32995 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000653|IPR015421|IPR015422|IPR015424 DegT/DnrJ/EryC1/StrS aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01041|PIRSF000390|SSF53383 BKD09_RS33000 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003362 Bacterial sugar transferase PF02397 BKD09_RS33005 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|SSF51735 BKD09_RS33010 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 G3DSA:3.10.560.10|G3DSA:3.30.1950.10|PF02563 BKD09_RS33015 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|SM00421|SSF46894 BKD09_RS33020 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13579|SSF53756 BKD09_RS33025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007016 O-antigen ligase-related PF04932 BKD09_RS33030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001962|IPR006426|IPR014729|IPR017932|IPR029055 Asparagine synthase|Asparagine synthase, glutamine-hydrolyzing|Glutamine amidotransferase type 2 domain|Nucleophile aminohydrolases, N-terminal|Rossmann-like alpha/beta/alpha sandwich fold GO:0004066|GO:0006529 G3DSA:3.40.50.620|G3DSA:3.60.20.10|PF00733|PF13537|PIRSF001589|SSF52402|SSF56235|TIGR01536 BKD09_RS33035 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003856|IPR027417 Lipopolysaccharide biosynthesis|P-loop containing nucleoside triphosphate hydrolase GO:0009103|GO:0016020 G3DSA:3.40.50.300|PF02706|SSF52540 BKD09_RS33040 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR001031|IPR009081|IPR020845|IPR029058 AMP-binding, conserved site|AMP-dependent synthetase/ligase|Alpha/Beta hydrolase fold|Phosphopantetheine binding ACP domain|Thioesterase GO:0003824|GO:0008152|GO:0009058|GO:0016788 G3DSA:1.10.1200.10|G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.1820|G3DSA:3.40.50.980|PF00501|PF00975|PS00455|SSF47336|SSF53474|SSF56801 BKD09_RS33045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003787|IPR027396 DsrEFH-like|Sulphur relay, DsrE/F-like protein G3DSA:3.40.1260.10|PF02635|SSF75169 BKD09_RS33055 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011852 TRAP transporter solute receptor, TAXI family G3DSA:3.40.190.10|PF16868|SSF53850 BKD09_RS33065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002052|IPR004556|IPR007848|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|Methyltransferase small domain|Modification methylase HemK|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0006479|GO:0008168|GO:0008276|GO:0032259 G3DSA:3.40.50.150|PF05175|PS00092|SSF53335|TIGR00536 BKD09_RS33070 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003997|IPR010129 RTX secretion protein D, Gram-negative bacteria|Type I secretion membrane fusion protein, HlyD family GO:0009306|GO:0015031|GO:0016020|GO:0016021 G3DSA:2.40.50.100|PF13437|PR01490|TIGR01843 BKD09_RS33080 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR010128|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|ATPase, type I secretion system, PrtD|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0008565|GO:0016021|GO:0016887|GO:0030253|GO:0030256|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|SM00382|SSF52540|SSF90123|TIGR01842 BKD09_RS33085 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR017853 Glycoside hydrolase superfamily SSF51445 BKD09_RS33090 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR001610|IPR001789|IPR003594|IPR003661|IPR004358|IPR005330|IPR011006 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|MHYT domain|PAC motif|PAS domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PF03707|PF13426|PR00344|SM00086|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55785|SSF55874|TIGR00229 BKD09_RS33095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS33100 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003313|IPR009057|IPR018060|IPR020449 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|Homeodomain-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PR00032|SM00342|SSF46689|SSF51215 BKD09_RS33105 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS33110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS33115 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|SM00382|SSF52540 BKD09_RS33120 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR008322|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase|Uncharacterised protein family UPF0261 GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF06792|PS00211|SM00382|SSF52540 BKD09_RS33125 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009215|IPR013785|IPR015813 Aldolase-type TIM barrel|Pyruvate/Phosphoenolpyruvate kinase-like domain|TIM-barrel domain, IGPS-like GO:0003824 G3DSA:1.20.5.460|G3DSA:3.20.20.70|PF09370|PIRSF034452|SSF51621 BKD09_RS33130 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001107|IPR031905 Band 7 domain|Flotillin, C-terminal domain PF01145|PF15975|SSF117892 BKD09_RS33135 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019587|IPR023393 Polyketide cyclase/dehydrase|START-like domain G3DSA:3.30.530.20|PF10604|SSF55961 BKD09_RS33140 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019587|IPR023393 Polyketide cyclase/dehydrase|START-like domain G3DSA:3.30.530.20|PF10604|SSF55961 BKD09_RS33145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002346|IPR005107|IPR016166|IPR016169 CO dehydrogenase flavoprotein, C-terminal|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD-binding, type 2|Molybdopterin dehydrogenase, FAD-binding GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.30.390.50|G3DSA:3.30.465.10|PF00941|PF03450|SM01092|SSF55447|SSF56176 BKD09_RS33150 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001041|IPR002888|IPR006058|IPR012675 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|[2Fe-2S]-binding GO:0009055|GO:0016491|GO:0046872|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.150.120|G3DSA:3.10.20.30|PF00111|PF01799|PS00197|SSF47741|SSF54292 BKD09_RS33155 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000674|IPR008274 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF01315|PF02738|SM01008|SSF54665|SSF56003 BKD09_RS33160 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 G3DSA:3.30.365.10|PF02738|SSF56003 BKD09_RS33165 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003593|IPR011704|IPR027417 AAA+ ATPase domain|ATPase, dynein-related, AAA domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF07728|SM00382|SSF52540 BKD09_RS33170 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002035|IPR008912|IPR011195 Uncharacterised conserved protein UCP010256|Uncharacterised protein family CoxE-like|von Willebrand factor, type A G3DSA:3.40.50.410|PF05762|PIRSF010256|SM00327|SSF53300 BKD09_RS33175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006680|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase GO:0016787 G3DSA:3.20.20.140|PF04909|SSF51556 BKD09_RS33180 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|SSF56281 BKD09_RS33185 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000868|IPR005511|IPR011042|IPR013658 Isochorismatase-like|SMP-30/Gluconolactonase/LRE-like region|Senescence marker protein-30 (SMP-30)|Six-bladed beta-propeller, TolB-like GO:0003824|GO:0008152 G3DSA:2.120.10.30|G3DSA:3.40.50.850|PF00857|PF08450|PR01790|SSF52499|SSF63829 BKD09_RS33190 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003680|IPR023048|IPR029039 Flavodoxin-like fold|Flavoprotein-like domain|NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 G3DSA:3.40.50.360|MF_01216|PF02525|SSF52218 BKD09_RS33195 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000843|IPR010982|IPR025997|IPR028082 LacI-type HTH domain|Lambda repressor-like, DNA-binding domain|Periplasmic binding protein|Periplasmic binding protein-like I GO:0003677|GO:0006355 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13407|PR00036|PS00356|SM00354|SSF47413|SSF53822 BKD09_RS33200 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029010|IPR029062 Class I glutamine amidotransferase-like|ThuA-like domain G3DSA:3.40.50.880|PF06283|SSF52317 BKD09_RS33205 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000683|IPR016040 NAD(P)-binding domain|Oxidoreductase, N-terminal GO:0016491 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01408|SSF51735|SSF55347 BKD09_RS33210 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS33215 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS33220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 G3DSA:3.40.190.10|PF01547|SSF53850 BKD09_RS33225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SM00822|SSF51735 BKD09_RS33230 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|SSF53474 BKD09_RS33235 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR000639|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Epoxide hydrolase-like GO:0003824 G3DSA:3.40.50.1820|PF00561|PR00111|PR00412|SSF53474 BKD09_RS33240 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 G3DSA:3.20.20.210|PF01717|SSF51726 BKD09_RS33245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 G3DSA:3.90.850.10|PF01557|SSF56529 BKD09_RS33250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002509|IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF01522|SSF88713 BKD09_RS33255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS33260 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS33265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS33270 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015168 SsuA/THI5-like G3DSA:3.40.190.10|PF09084|SSF53850 BKD09_RS33275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|SM00345|SM00895|SSF46785|SSF48008 BKD09_RS33280 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|SM00849|SSF56281 BKD09_RS33285 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003779|IPR029032 AhpD-like|Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 G3DSA:1.20.1290.10|PF02627|SSF69118 BKD09_RS33290 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005656 MmgE/PrpD GO:0016829 G3DSA:3.30.1330.120|PF03972|SSF103378 BKD09_RS33295 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006115|IPR008927|IPR013328|IPR015815|IPR016040|IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain|3-hydroxyisobutyrate dehydrogenase-related|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, NADP-binding|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0004616|GO:0016491|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF03446|PF14833|PIRSF000103|SSF48179|SSF51735 BKD09_RS33300 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005656 MmgE/PrpD GO:0016829 G3DSA:3.30.1330.120|PF03972|SSF103378 BKD09_RS33305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS33310 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851|IPR003439|IPR003593|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter, permease|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005215|GO:0005524|GO:0006810|GO:0016020|GO:0016887 G3DSA:3.40.50.300|PF00005|PF02653|PF12399|SM00382|SSF52540 BKD09_RS33315 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS33320 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000709|IPR028081|IPR028082 Leu/Ile/Val-binding protein|Leucine-binding protein domain|Periplasmic binding protein-like I GO:0006865 G3DSA:3.40.50.2300|PF13458|PR00337|SSF53822 BKD09_RS33325 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000709|IPR028081|IPR028082 Leu/Ile/Val-binding protein|Leucine-binding protein domain|Periplasmic binding protein-like I GO:0006865 G3DSA:3.40.50.2300|PF13458|PR00337|SSF53822 BKD09_RS33330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003779|IPR029032 AhpD-like|Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 G3DSA:1.20.1290.10|PF02627|SSF69118 BKD09_RS33335 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SSF51735 BKD09_RS33340 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|SSF51735 BKD09_RS33345 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|SM00345|SM00895|SSF46785|SSF48008 BKD09_RS33350 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 BKD09_RS33355 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001650|IPR003711|IPR005118|IPR011545|IPR014001|IPR027417 CarD-like/TRCF domain|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Transcription-repair-coupling factor, C-terminal domain GO:0003676|GO:0005524|GO:0006281 G3DSA:3.30.2060.10|G3DSA:3.40.50.300|PF00270|PF00271|PF02559|PF03461|SM00487|SM00490|SM00982|SM01058|SSF141259|SSF143517|SSF52540 BKD09_RS33365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR022224 Protein of unknown function DUF3750 PF12570 BKD09_RS33370 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000843|IPR010982|IPR025997|IPR028082 LacI-type HTH domain|Lambda repressor-like, DNA-binding domain|Periplasmic binding protein|Periplasmic binding protein-like I GO:0003677|GO:0006355 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13407|PS00356|SM00354|SSF47413|SSF53822 BKD09_RS33375 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004682|IPR018389 TRAP transporter solute receptor DctP/TeaA|TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 PF03480|PIRSF006470|TIGR00787 BKD09_RS33380 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004681|IPR007387|IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein|Tripartite ATP-independent periplasmic transporter, DctQ component GO:0016021 PF04290|PF06808|TIGR00786 BKD09_RS33385 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase G3DSA:3.10.180.10|PF13669|SSF54593 BKD09_RS33390 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000685|IPR017443|IPR020878 Ribulose bisphosphate carboxylase, large chain, active site|Ribulose bisphosphate carboxylase, large subunit, C-terminal|Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0000287|GO:0015977|GO:0016984 G3DSA:3.20.20.110|G3DSA:3.30.70.150|PF00016|PF02788|PS00157|SSF51649|SSF54966 BKD09_RS33395 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010737|IPR031475 Putative nucleotide-binding C-terminal domain|Putative sugar-binding, N-terminal domain PF07005|PF17042|SSF142764 BKD09_RS33400 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001547|IPR013781|IPR017853 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 5 GO:0004553|GO:0005975 G3DSA:3.20.20.80|PF00150|SSF51445 BKD09_RS33405 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007016 O-antigen ligase-related PF04932 BKD09_RS33410 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016181 Acyl-CoA N-acyltransferase PF13480|SSF55729 BKD09_RS33415 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002938|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain GO:0016491|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF01494|PR00420|SSF51905 BKD09_RS33420 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002797|IPR029303 Polysaccharide biosynthesis protein|Polysaccharide biosynthesis protein, C-terminal domain GO:0016020 PF01943|PF14667 BKD09_RS33425 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001296 Glycosyl transferase, family 1 G3DSA:3.40.50.2000|PF00534|SSF53756 BKD09_RS33430 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain SSF75005 BKD09_RS33435 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025997|IPR028082 Periplasmic binding protein|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13407|SSF53822 BKD09_RS33440 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS33445 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS33450 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000577|IPR006000|IPR018483|IPR018484|IPR018485 Carbohydrate kinase, FGGY|Carbohydrate kinase, FGGY, C-terminal|Carbohydrate kinase, FGGY, N-terminal|Carbohydrate kinase, FGGY, conserved site|Xylulokinase GO:0004856|GO:0005975|GO:0005997|GO:0016773 G3DSA:3.30.420.40|PF00370|PF02782|PIRSF000538|PS00933|SSF53067|TIGR01312 BKD09_RS33455 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 BKD09_RS33460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011008|IPR013097 Dimeric alpha-beta barrel|Stress responsive alpha-beta barrel G3DSA:3.30.70.900|PF07876|SM00886|SSF54909 BKD09_RS33465 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 G3DSA:1.20.1090.10|G3DSA:3.40.50.1970|PF00465|SSF56796 BKD09_RS33470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|SSF51338|SSF51556 BKD09_RS33475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006115|IPR008927|IPR013328|IPR015815|IPR016040|IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain|3-hydroxyisobutyrate dehydrogenase-related|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, NADP-binding|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0004616|GO:0016491|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF03446|PF14833|PIRSF000103|SSF48179|SSF51735 BKD09_RS33480 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000627|IPR007535|IPR015889 Catechol dioxygenase, N-terminal|Intradiol ring-cleavage dioxygenase, C-terminal|Intradiol ring-cleavage dioxygenase, core GO:0003824|GO:0005506|GO:0006725|GO:0008199|GO:0009712|GO:0016702|GO:0018576|GO:0055114 G3DSA:2.60.130.10|PF00775|PF04444|PS00083|SSF49482 BKD09_RS33485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004113|IPR006094|IPR016164|IPR016166|IPR016167|IPR016169|IPR016171 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|FAD-linked oxidase, C-terminal|FAD-linked oxidase-like, C-terminal|Vanillyl-alcohol oxidase, C-terminal subdomain 2 GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:1.10.45.10|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF01565|PF02913|SSF55103|SSF56176 BKD09_RS33490 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS33495 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS33500 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS33505 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025997|IPR028082 Periplasmic binding protein|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13407|SSF53822 BKD09_RS33510 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005545|IPR011008 Dimeric alpha-beta barrel|YCII-related G3DSA:3.30.70.1060|PF03795|SSF54909 BKD09_RS33515 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540|TIGR01727 BKD09_RS33520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540|TIGR01727 BKD09_RS33525 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS33530 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS33535 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000914 Solute-binding protein family 5 domain G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|SSF53850 BKD09_RS33540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540 BKD09_RS33545 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR025966 ABC transporter type 1, transmembrane domain MetI-like|Oligopeptide transport permease C-like, N-terminal domain GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PF12911|SSF161098 BKD09_RS33550 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS33555 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|PF00496|PIRSF002741|SSF53850 BKD09_RS33560 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF13738|PR00411|SSF51905 BKD09_RS33565 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00080|PR00081|SSF51735 BKD09_RS33570 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|SSF51735 BKD09_RS33575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006680|IPR011059|IPR011778|IPR032466 Amidohydrolase-related|Hydantoinase/dihydropyrimidinase|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0005737|GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|SSF51338|SSF51556|TIGR02033 BKD09_RS33580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 PF01177 BKD09_RS33585 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002563|IPR012349 FMN-binding split barrel|Flavin reductase like domain GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF01613|SM00903|SSF50475 BKD09_RS33590 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 G3DSA:3.60.110.10|PF00795|SSF56317 BKD09_RS33595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801 BKD09_RS33600 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001917|IPR005814|IPR015421|IPR015422|IPR015424 Aminotransferase class-III|Aminotransferase, class-II, pyridoxal-phosphate binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0008152|GO:0008483|GO:0016740|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00202|PS00599|PS00600|SSF53383 BKD09_RS33605 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003692 Hydantoinase B/oxoprolinase GO:0003824 PF02538 BKD09_RS33610 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002821|IPR008040 Hydantoinase/oxoprolinase|Hydantoinaseoxoprolinase, N-terminal GO:0016787 PF01968|PF05378|SSF53067 BKD09_RS33615 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR004839|IPR011991|IPR015421|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0003824|GO:0006355|GO:0009058|GO:0030170 G3DSA:1.10.10.10|G3DSA:3.40.640.10|PF00155|PF00392|SM00345|SSF46785|SSF53383 BKD09_RS33620 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015590|IPR016161|IPR016162|IPR016163 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|SSF53720 BKD09_RS33625 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006680|IPR011059|IPR011778|IPR032466 Amidohydrolase-related|Hydantoinase/dihydropyrimidinase|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0005737|GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|SSF51338|SSF51556|TIGR02033 BKD09_RS33630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015942|IPR026286 Asp/Glu/hydantoin racemase|Maleate isomerase/Arylmalonate decarboxylase GO:0006807|GO:0036361 PF01177|PIRSF015736 BKD09_RS33635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005625 PepSY-associated TM protein PF03929 BKD09_RS33640 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|SSF56935 BKD09_RS33645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013078|IPR029033 Histidine phosphatase superfamily|Histidine phosphatase superfamily, clade-1 G3DSA:3.40.50.1240|PF00300|SM00855|SSF53254 BKD09_RS33650 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003200|IPR017846|IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal|Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic|Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009163|GO:0009236 G3DSA:1.10.1610.10|G3DSA:3.40.50.10210|MF_00230|PF02277|SSF52733|TIGR03160 BKD09_RS33655 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000878|IPR012797|IPR014776|IPR014777 Cobalamin (vitamin B12) biosynthesis CobF, precorrin-6A synthase|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168|GO:0009236|GO:0043819 G3DSA:3.30.950.10|G3DSA:3.40.1010.10|PF00590|PIRSF036525|SSF53790|TIGR02434 BKD09_RS33660 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family GO:0000041|GO:0016021 PF01891 BKD09_RS33665 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000878|IPR003043|IPR006366|IPR014776|IPR014777 Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2|Uroporphiryn-III C-methyltransferase, conserved site|Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008152|GO:0008168|GO:0055114 G3DSA:3.30.950.10|G3DSA:3.40.1010.10|PF00590|PS00839|PS00840|SSF53790|TIGR01469 BKD09_RS33670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002586|IPR004484|IPR011698|IPR027417|IPR029062 Class I glutamine amidotransferase-like|CobB/CobQ-like glutamine amidotransferase|CobQ/CobB/MinD/ParA nucleotide binding domain|Cobyrinic acid a,c-diamide synthase CbiA|P-loop containing nucleoside triphosphate hydrolase GO:0003824|GO:0009236|GO:0042242 G3DSA:3.40.50.300|G3DSA:3.40.50.880|MF_00027|PF01656|PF07685|SSF52317|SSF52540|TIGR00379 BKD09_RS33675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000878|IPR003043|IPR006362|IPR014776|IPR014777 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2|Uroporphiryn-III C-methyltransferase, conserved site GO:0008152|GO:0008168|GO:0009236|GO:0046026|GO:0055114 G3DSA:3.30.950.10|G3DSA:3.40.1010.10|PF00590|PS00839|PS00840|SSF53790|TIGR01465 BKD09_RS33680 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002750 CobE/GbiG C-terminal domain GO:0009236 G3DSA:3.30.420.180|PF01890|SSF159664 BKD09_RS33685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000878|IPR006365|IPR012818|IPR014008|IPR014776|IPR014777|IPR029063 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase|Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase|Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit|S-adenosyl-L-methionine-dependent methyltransferase|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168|GO:0008276|GO:0009236 G3DSA:3.30.950.10|G3DSA:3.40.1010.10|G3DSA:3.40.50.150|PF00590|PIRSF036428|SSF53335|SSF53790|TIGR02467|TIGR02469 BKD09_RS33690 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 PF02571|TIGR00715 BKD09_RS33695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000878|IPR006363|IPR014776|IPR014777 Precorrin-3B C17-methyltransferase domain|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168|GO:0009236 G3DSA:3.30.950.10|G3DSA:3.40.1010.10|PF00590|SSF53790|TIGR01466 BKD09_RS33700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000878|IPR006364|IPR012382|IPR014777 Precorrin-2 C(20)-methyltransferase|Precorrin-2 C(20)-methyltransferase domain|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168|GO:0008757|GO:0009236|GO:0030788 G3DSA:3.40.1010.10|PF00590|PIRSF036427|SSF53790|TIGR01467 BKD09_RS33705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 G3DSA:3.40.50.10230|PF02570|SSF63965 BKD09_RS33710 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005117|IPR012798 Cobalamin (vitamin B12) biosynthesis CobG-like|Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 G3DSA:3.30.413.10|G3DSA:3.90.480.10|PF03460|SSF55124|SSF56014|TIGR02435 BKD09_RS33715 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003672 CobN/magnesium chelatase GO:0009058 PF02514 BKD09_RS33720 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003495|IPR011629|IPR012824|IPR027417 CobW/HypB/UreG, nucleotide-binding domain|Cobalamin (vitamin B12) biosynthesis CobW|Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0009236 G3DSA:3.30.1220.10|G3DSA:3.40.50.300|PF02492|PF07683|SM00833|SSF52540|SSF90002|TIGR02475 BKD09_RS33725 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012336|IPR012863 Protein of unknown function DUF1636|Thioredoxin-like fold G3DSA:3.40.30.10|PF07845|SSF52833 BKD09_RS33730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003724|IPR027417 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0008817|GO:0009236 G3DSA:3.40.50.300|PF02572|PIRSF015617|SSF52540|TIGR00708 BKD09_RS33735 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002586|IPR004459|IPR011698|IPR027417|IPR029062 Class I glutamine amidotransferase-like|CobB/CobQ-like glutamine amidotransferase|CobQ/CobB/MinD/ParA nucleotide binding domain|Cobyric acid synthase CobQ|P-loop containing nucleoside triphosphate hydrolase GO:0003824|GO:0009236 G3DSA:3.40.50.300|G3DSA:3.40.50.880|MF_00028|PF01656|PF07685|SSF52317|SSF52540|TIGR00313 BKD09_RS33740 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004838|IPR004839|IPR005860|IPR015421|IPR015424 Aminotransferase, class I/classII|Aminotransferases, class-I, pyridoxal-phosphate-binding site|L-threonine-O-3-phosphate decarboxylase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824|GO:0009058|GO:0009236|GO:0030170 G3DSA:3.40.640.10|PF00155|PS00105|SSF53383|TIGR01140 BKD09_RS33745 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 MF_00024|PF03186|TIGR00380 BKD09_RS33750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003203|IPR027417 Cobinamide kinase/cobinamide phosphate guanyltransferase|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0009236|GO:0043752|GO:0051188 G3DSA:3.40.50.300|PF02283|PIRSF006135|SSF52540 BKD09_RS33755 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 MF_00719|PF02654|TIGR00317 BKD09_RS33760 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000415|IPR012825|IPR029479 5,6-dimethylbenzimidazole synthase BluB|Nitroreductase|Nitroreductase-like GO:0016491 G3DSA:3.40.109.10|PF00881|SSF55469|TIGR02476 BKD09_RS33765 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000184|IPR013686 Bacterial surface antigen (D15)|Polypeptide-transport-associated, ShlB-type GO:0019867 G3DSA:2.40.160.50|G3DSA:3.10.20.310|PF01103|PF08479 BKD09_RS33770 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008638|IPR011050 Filamentous haemagglutinin, N-terminal|Pectin lyase fold/virulence factor SM00912|SSF51126 BKD09_RS33780 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007487|IPR028082 ABC transporter, substrate-binding protein|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF04392|SSF53822 BKD09_RS33785 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR003594|IPR003660|IPR003661|IPR004358|IPR008207|IPR011006|IPR033479 CheY-like superfamily|Double Cache domain 1|HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:1.20.120.160|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF00672|PF01627|PF02518|PF02743|PR00344|SM00304|SM00387|SM00388|SM00448|SSF158472|SSF47226|SSF47384|SSF52172|SSF55874 BKD09_RS33795 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS33800 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|SSF54593 BKD09_RS33805 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003140|IPR029058 Alpha/Beta hydrolase fold|Phospholipase/carboxylesterase/thioesterase GO:0016787 G3DSA:3.40.50.1820|PF02230|SSF53474 BKD09_RS33810 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 G3DSA:3.40.50.2000|PF04101|SSF53756 BKD09_RS33815 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|SSF53448 BKD09_RS33820 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001867|IPR011990|IPR011991|IPR016032 OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Tetratricopeptide-like helical domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0005515|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.25.40.10|PF00486|SM00862|SSF46894|SSF48452 BKD09_RS33825 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009506 Protein of unknown function DUF1127 PF06568 BKD09_RS33830 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010621|IPR010679|IPR023289 Domain of unknown function DUF1214|Domain of unknown function DUF1254|VPA0735-like domain G3DSA:1.10.3360.10|G3DSA:2.60.120.600|G3DSA:2.60.40.1610|PF06742|PF06863|SSF160935 BKD09_RS33835 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|SSF53474 BKD09_RS33840 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 BKD09_RS33845 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023631 Amidase signature domain G3DSA:3.90.1300.10|PF01425|SSF75304 BKD09_RS33850 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000914|IPR023765|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain|Solute-binding protein family 5, conserved site GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PS01040|SSF53850 BKD09_RS33855 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540|TIGR01727 BKD09_RS33860 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540|TIGR01727 BKD09_RS33865 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS33870 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS33875 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023631 Amidase signature domain G3DSA:3.90.1300.10|PF01425|SSF75304 BKD09_RS33880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS33885 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002173|IPR011611|IPR029056 Carbohydrate kinase PfkB|Carbohydrate/puine kinase, PfkB, conserved site|Ribokinase-like GO:0016773 G3DSA:3.40.1190.20|PF00294|PS00584|SSF53613 BKD09_RS33890 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000577|IPR006003|IPR018484|IPR018485 Carbohydrate kinase, FGGY|Carbohydrate kinase, FGGY, C-terminal|Carbohydrate kinase, FGGY, N-terminal|Carbohydrate kinase, FGGY-related GO:0005975|GO:0016773 G3DSA:3.30.420.40|PF00370|PF02782|PIRSF000538|SSF53067|TIGR01315 BKD09_RS33895 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SSF51735 BKD09_RS33900 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR008995|IPR012340|IPR013611|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0016887|GO:0043190 G3DSA:2.40.50.100|G3DSA:2.40.50.140|G3DSA:3.40.50.300|PF00005|PF08402|PS00211|SM00382|SSF50331|SSF52540 BKD09_RS33905 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS33910 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS33915 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 G3DSA:3.40.190.10|PF01547|SSF53850 BKD09_RS33920 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007324 Sugar-binding domain, putative GO:0030246 G3DSA:3.40.50.1360|PF04198|SSF100950 BKD09_RS33925 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006439|IPR023198|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain|Phosphoglycolate phosphatase, domain 2 GO:0008152|GO:0016787 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|SSF56784|TIGR01509 BKD09_RS33930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002035 von Willebrand factor, type A G3DSA:3.40.50.410|PF00092|SM00327|SSF53300 BKD09_RS33935 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011704|IPR013615|IPR027417 ATPase, dynein-related, AAA domain|CbbQ/NirQ/NorQ, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF07728|PF08406|SSF52540 BKD09_RS33940 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000883|IPR023615|IPR023616 Cytochrome c oxidase subunit I|Cytochrome c oxidase, subunit I domain|Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 G3DSA:1.20.210.10|PF00115|PS00077|SSF81442 BKD09_RS33945 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF00034|SSF46626 BKD09_RS33950 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 PF03626 BKD09_RS33955 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000298|IPR013833 Cytochrome c oxidase subunit III domain|Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0015002|GO:0016020|GO:0022904 G3DSA:1.20.120.80|PF00510|SSF81452 BKD09_RS33960 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR003594|IPR003661|IPR004358|IPR013656 Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF02518|PF08448|PR00344|SM00387|SSF47384|SSF55785|SSF55874|TIGR00229 BKD09_RS33970 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS33975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS33980 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025997|IPR028082 Periplasmic binding protein|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13407|SSF53822 BKD09_RS33985 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005511|IPR011042|IPR013658 SMP-30/Gluconolactonase/LRE-like region|Senescence marker protein-30 (SMP-30)|Six-bladed beta-propeller, TolB-like G3DSA:2.120.10.30|PF08450|PR01790|SSF63829 BKD09_RS33990 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008183|IPR011013|IPR014718|IPR015443 Aldose 1-/Glucose-6-phosphate 1-epimerase|Aldose 1-epimerase|Galactose mutarotase-like domain|Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0016853|GO:0019318|GO:0030246 G3DSA:2.70.98.10|PF01263|PIRSF005096|SSF74650 BKD09_RS33995 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000683|IPR016040 NAD(P)-binding domain|Oxidoreductase, N-terminal GO:0016491 G3DSA:3.40.50.720|PF01408|SSF51735 BKD09_RS34000 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|SM00345|SM00895|SSF46785|SSF48008 BKD09_RS34005 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS34010 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS34015 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS34020 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025997|IPR028082 Periplasmic binding protein|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13407|SSF53822 BKD09_RS34025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 G3DSA:3.90.850.10|SSF56529 BKD09_RS34030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004155|IPR011989|IPR016024 Armadillo-like helical|Armadillo-type fold|PBS lyase HEAT-like repeat GO:0005488 G3DSA:1.25.10.10|PF13646|SM00567|SSF48371 BKD09_RS34035 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain G3DSA:3.30.70.20|PF12838|PS00198|SSF54862 BKD09_RS34040 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003953|IPR015939|IPR023753|IPR030664 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain|Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal|Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit GO:0016491|GO:0055114 G3DSA:1.20.58.100|G3DSA:3.50.50.60|G3DSA:4.10.80.40|PF00890|PF02910|PIRSF000171|PR00368|PR00411|SSF46977|SSF51905 BKD09_RS34045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001433|IPR001709|IPR008333|IPR017938 Flavoprotein pyridine nucleotide cytochrome reductase|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.40.50.80|PF00175|PF00970|PR00371|SSF52343|SSF63380 BKD09_RS34050 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010376 Domain of unknown function DUF971 PF06155 BKD09_RS34055 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|SM00100|SSF46785|SSF51206 BKD09_RS34060 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.40.190.10|PF13379|SSF160387|SSF53850 BKD09_RS34065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS34070 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS34075 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 PF03601 BKD09_RS34085 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS34090 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|PS00211|SM00382|SSF52540 BKD09_RS34095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS34100 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS34105 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000709|IPR028081|IPR028082 Leu/Ile/Val-binding protein|Leucine-binding protein domain|Periplasmic binding protein-like I GO:0006865 G3DSA:3.40.50.2300|PF13458|PR00337|SSF53822 BKD09_RS34110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR025110 AMP-binding enzyme C-terminal domain|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|SSF56801 BKD09_RS34115 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|SSF46689 BKD09_RS34120 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF13738|SSF51905 BKD09_RS34125 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001853|IPR012336 DSBA-like thioredoxin domain|Thioredoxin-like fold GO:0015035 G3DSA:3.40.30.10|PF01323|SSF52833 BKD09_RS34130 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007698|IPR007886|IPR008141|IPR008143|IPR016040|IPR023753 Alanine dehydrogenase|Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal|Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain|Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2|FAD/NAD(P)-binding domain|NAD(P)-binding domain GO:0000286|GO:0016491|GO:0042853|GO:0055114 G3DSA:3.40.50.1770|G3DSA:3.50.50.60|PF01262|PF05222|PIRSF000183|PS00837|SM01002|SM01003|SSF51735|SSF52283|TIGR00518 BKD09_RS34135 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000485|IPR011008|IPR011991|IPR019887|IPR019888 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13412|PR00033|SM00344|SSF46785|SSF54909 BKD09_RS34140 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001041|IPR002888|IPR006058|IPR012675 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|[2Fe-2S]-binding GO:0009055|GO:0016491|GO:0046872|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.150.120|G3DSA:3.10.20.30|PF00111|PF01799|PS00197|SSF47741|SSF54292 BKD09_RS34145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002346|IPR005107|IPR016166|IPR016167|IPR016169 CO dehydrogenase flavoprotein, C-terminal|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|Molybdopterin dehydrogenase, FAD-binding GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.30.390.50|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF00941|PF03450|SM01092|SSF55447|SSF56176 BKD09_RS34150 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000674|IPR008274 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF01315|PF02738|SM01008|SSF54665|SSF56003 BKD09_RS34155 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000310|IPR005308|IPR008286|IPR011193|IPR015421|IPR015422|IPR015424 Orn/Lys/Arg decarboxylase, C-terminal|Orn/Lys/Arg decarboxylase, N-terminal|Orn/Lys/Arg decarboxylase, major domain|Ornithine/lysine/arginine decarboxylase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0005737|GO:0006520|GO:0016831 G3DSA:3.40.640.10|G3DSA:3.90.100.10|G3DSA:3.90.1150.10|PF01276|PF03709|PF03711|PIRSF009393|PS00703|SSF53383|SSF55904 BKD09_RS34160 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|PF13420|SSF55729 BKD09_RS34170 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001444|IPR010930|IPR019776 Flagellar basal body rod protein, N-terminal|Flagellar basal body rod protein, conserved site|Flagellar basal-body/hook protein, C-terminal domain GO:0071973 PF00460|PF06429|PS00588 BKD09_RS34175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006139|IPR006140|IPR016040|IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF00389|PF02826|PS00065|SSF51735|SSF52283 BKD09_RS34180 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012001|IPR029061 Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 G3DSA:3.40.50.970|PF02776|SSF52518 BKD09_RS34185 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000399|IPR011766|IPR029061 TPP-binding enzyme, conserved site|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0000287|GO:0003824|GO:0030976 G3DSA:3.40.50.970|PF02775|PS00187|SSF52518 BKD09_RS34190 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006976|IPR017015 Uncharacterised conserved protein UCP033367, VanZ, Bll3170|VanZ-like PF04892|PIRSF033367 BKD09_RS34195 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009642 Protein of unknown function DUF1236 PF06823 BKD09_RS34200 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002204|IPR006115|IPR006398|IPR008927|IPR013328|IPR015815|IPR016040|IPR029154 2-hydroxy-3-oxopropionate reductase|3-hydroxyisobutyrate dehydrogenase, NAD-binding domain|3-hydroxyisobutyrate dehydrogenase-related|3-hydroxyisobutyrate dehydrogenase-related, conserved site|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, NADP-binding|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0004616|GO:0008679|GO:0016491|GO:0046487|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF03446|PF14833|PIRSF000103|PS00895|SSF48179|SSF51735|TIGR01505 BKD09_RS34205 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013022|IPR017643|IPR026040 Hydroxypyruvate isomerase|Hydroxypyruvate isomerase-like|Xylose isomerase-like, TIM barrel domain G3DSA:3.20.20.150|PF01261|PIRSF006241|SSF51658|TIGR03234 BKD09_RS34210 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006397|IPR011766|IPR012000|IPR012001|IPR029035|IPR029061 DHS-like NAD/FAD-binding domain|Glyoxylate carboligase|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0009028|GO:0009436|GO:0030976 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|SSF52467|SSF52518|TIGR01504 BKD09_RS34215 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006679|IPR006680|IPR011059|IPR026912|IPR032466 Adenine deaminase|Adenine deaminase C-terminal domain|Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0000034|GO:0006146|GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|MF_01518|PF01979|PF13382|SSF51338|SSF51556 BKD09_RS34220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021139|IPR025605|IPR029060 NYN domain, limkain-b1-type|OST-HTH/LOTUS domain|PIN domain-like G3DSA:3.40.50.1010|PF01936|PF12872 BKD09_RS34225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002823 Protein of unknown function DUF112, transmembrane PF01970 BKD09_RS34230 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009936 Protein of unknown function DUF1468 PF07331 BKD09_RS34235 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005064 Bordetella uptake gene GO:0030288 G3DSA:3.40.190.10|PF03401|PIRSF017082|SSF53850 BKD09_RS34240 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|SM00346|SSF46785|SSF55781 BKD09_RS34245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003781|IPR013816|IPR016040|IPR016102|IPR032875 ATP-grasp fold, subdomain 2|CoA-binding|NAD(P)-binding domain|Succinyl-CoA synthetase-like|Succinyl-CoA synthetase-like, flavodoxin domain GO:0005524|GO:0048037 G3DSA:3.30.470.20|G3DSA:3.40.50.261|G3DSA:3.40.50.720|PF13380|PF13549|PF13607|SM00881|SSF51735|SSF52210|SSF56059 BKD09_RS34250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|SM00345|SM00895|SSF46785|SSF48008 BKD09_RS34255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011766|IPR012000|IPR012001|IPR017660|IPR029035|IPR029061 DHS-like NAD/FAD-binding domain|Oxalyl-CoA decarboxylase|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0008949|GO:0030976|GO:0033611|GO:0046872 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|SSF52467|SSF52518|TIGR03254 BKD09_RS34260 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003673|IPR017659|IPR023606 CoA-transferase family III|CoA-transferase family III domain|Formyl-CoA:oxalate CoA-transferase GO:0003824|GO:0008152|GO:0033608 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|MF_00742|PF02515|SSF89796|TIGR03253 BKD09_RS34265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002684|IPR006638|IPR007197|IPR010722|IPR013785|IPR024177 Aldolase-type TIM barrel|Biotin and thiamin synthesis-associated domain|Biotin synthase|Biotin synthase/Biotin biosynthesis bifunctional protein BioAB|Elongator protein 3/MiaB/NifB|Radical SAM GO:0003824|GO:0004076|GO:0009102|GO:0051536 G3DSA:3.20.20.70|MF_01694|PF04055|PF06968|PIRSF001619|SM00729|SM00876|SSF102114|TIGR00433 BKD09_RS34285 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002059|IPR011129|IPR012156|IPR012340|IPR019844 Cold shock protein|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|SM00357|SSF50249 BKD09_RS34295 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF13443|SM00530|SSF47413 BKD09_RS34300 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021354 Protein of unknown function DUF2975 PF11188 BKD09_RS34305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019223 Domain of unknown function DUF2147 PF09917 BKD09_RS34310 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013538|IPR023393 Activator of Hsp90 ATPase homologue 1-like|START-like domain GO:0006950 G3DSA:3.30.530.20|PF08327|SSF55961 BKD09_RS34315 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013126|IPR018181 Heat shock protein 70 family|Heat shock protein 70, conserved site G3DSA:3.30.420.40|G3DSA:3.90.640.10|PF00012|PS01036|SSF53067 BKD09_RS34320 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846|IPR026355 Major facilitator superfamily|Major facilitator superfamily domain|Oxalate/formate antiporter GO:0005215|GO:0006810|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473|TIGR04259 BKD09_RS34325 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846|IPR026355 Major facilitator superfamily|Major facilitator superfamily domain|Oxalate/formate antiporter GO:0005215|GO:0006810|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473|TIGR04259 BKD09_RS34330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000644 CBS domain G3DSA:3.10.580.10|PF00571|SM00116|SSF54631 BKD09_RS34335 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008927|IPR013328|IPR013332|IPR013752|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|Ketopantoate reductase, C-terminal domain|Ketopantoate reductase, N-terminal domain|NAD(P)-binding domain GO:0008677|GO:0016491|GO:0050661|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF02558|PF08546|SSF48179|SSF51735 BKD09_RS34340 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011234|IPR018833 Domain of unknown function DUF2437|Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 G3DSA:3.90.850.10|PF01557|PF10370|SSF56529 BKD09_RS34365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004136|IPR013785 Aldolase-type TIM barrel|Nitronate monooxygenase GO:0003824|GO:0018580|GO:0055114 G3DSA:3.20.20.70|PF03060|SSF51412 BKD09_RS34370 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|SM00829|SSF50129|SSF51735 BKD09_RS34375 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002524|IPR027469|IPR027470 Cation efflux protein|Cation efflux protein transmembrane domain|Cation efflux protein, cytoplasmic domain GO:0006812|GO:0008324|GO:0016021|GO:0055085 G3DSA:1.20.1510.10|G3DSA:3.30.70.1350|PF01545|PF16916|SSF160240|SSF161111|TIGR01297 BKD09_RS34380 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR001610|IPR003594|IPR003661|IPR004358|IPR013655 Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold-3|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0005515|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF02518|PF08447|PF12860|PR00344|SM00086|SM00091|SM00387|SM00388|SSF47384|SSF55785|SSF55874 BKD09_RS34385 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS34390 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002023|IPR012336 NADH-quinone oxidoreductase subunit E-like|Thioredoxin-like fold GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF01257|PIRSF000216|PS01099|SSF52833 BKD09_RS34395 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001949|IPR011538|IPR012336|IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain|NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain|NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site|Thioredoxin-like fold GO:0008137|GO:0010181|GO:0051539|GO:0055114 G3DSA:3.40.30.10|PF01512|PF10589|PS00644|PS00645|SM00928|SSF140490|SSF142019|SSF142984|SSF52833 BKD09_RS34400 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001041|IPR006478|IPR006656|IPR006657|IPR006963|IPR009010|IPR012675|IPR017896|IPR017900|IPR019574 2Fe-2S ferredoxin-type iron-sulfur binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Aspartate decarboxylase-like domain|Beta-grasp domain|Formate dehydrogenase, alpha subunit|Molybdopterin dinucleotide-binding domain|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, 4Fe-4S domain|NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0008863|GO:0009055|GO:0015942|GO:0016491|GO:0030151|GO:0051536|GO:0055114 G3DSA:2.20.25.90|G3DSA:2.40.40.20|G3DSA:3.10.20.30|G3DSA:3.30.70.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|PF00037|PF00384|PF01568|PF04879|PF10588|PF13510|PIRSF036643|PS00198|SM00926|SM00929|SSF50692|SSF53706|SSF54292|SSF54862|TIGR01591 BKD09_RS34405 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003786|IPR016193 Cytidine deaminase-like|Protein FdhD GO:0003824|GO:0016783 G3DSA:3.10.20.10|G3DSA:3.40.140.10|MF_00187|PF02634|PIRSF015626|SSF53927|TIGR00129 BKD09_RS34410 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021074 Formate dehydrogenase, delta subunit PF11390 BKD09_RS34415 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005190|IPR013546|IPR023057 Glutamate-ammonia ligase adenylyltransferase, repeated domain|Glutamate-ammonia-ligase adenylyltransferase|PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0008882|GO:0016779 G3DSA:3.30.460.10|MF_00802|PF03710|PF08335|SSF81301|SSF81593 BKD09_RS34420 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003594|IPR003660|IPR003661|IPR004358 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PR00344|SM00304|SM00387|SM00388|SSF158472|SSF47384|SSF55874 BKD09_RS34425 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002586|IPR003856|IPR005702|IPR027417|IPR032807 CobQ/CobB/MinD/ParA nucleotide binding domain|Exopolysaccharide synthesis protein|Lipopolysaccharide biosynthesis|P-loop containing nucleoside triphosphate hydrolase|Tyrosine kinase, G-rich domain GO:0009103|GO:0016020|GO:0045226 G3DSA:3.40.50.300|PF01656|PF02706|PF13807|SSF52540|TIGR01007 BKD09_RS34430 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006368|IPR016040 GDP-mannose 4,6-dehydratase|NAD(P)-binding domain GO:0008446|GO:0019673 G3DSA:3.40.50.720|G3DSA:3.90.25.10|MF_00955|PF16363|SSF51735|TIGR01472 BKD09_RS34435 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001509|IPR016040|IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase|NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0009226|GO:0016491|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|MF_00956|PF01370|SSF51735 BKD09_RS34440 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057 Homeodomain-like GO:0003677 G3DSA:1.10.10.60|PF13384|SSF46689 BKD09_RS34445 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003362|IPR017473|IPR017475 Bacterial sugar transferase|Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase|Undecaprenyl-phosphate glucose phosphotransferase, WcaJ PF02397|PF13727|TIGR03023|TIGR03025 BKD09_RS34450 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000297|IPR027304 Peptidyl-prolyl cis-trans isomerase, PpiC-type|Trigger factor/SurA domain GO:0016853 G3DSA:3.10.50.40|PF13145|SSF109998|SSF54534 BKD09_RS34460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032638 Putative bacterial porin PF16930 BKD09_RS34465 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.30.1150.10|SSF74653 BKD09_RS34470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 PF02472 BKD09_RS34475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001791|IPR002898|IPR013320|IPR018765 Concanavalin A-like lectin/glucanase domain|Domain of unknown function DUF2341|Laminin G domain|MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 G3DSA:2.60.120.200|PF01618|PF10102|PF13385|SM00282|SSF49899 BKD09_RS34480 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013686 Polypeptide-transport-associated, ShlB-type G3DSA:2.40.160.50|G3DSA:3.10.20.310|PF08479 BKD09_RS34485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|SSF88659|SSF88946|TIGR02937 BKD09_RS34490 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032623 FecR, N-terminal PF16220 BKD09_RS34495 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008258|IPR023346 Lysozyme-like domain|Transglycosylase SLT domain 1 G3DSA:1.10.530.10|PF01464|SSF53955 BKD09_RS34505 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 G3DSA:3.10.560.10|G3DSA:3.30.1950.10|PF02563 BKD09_RS34520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008638|IPR011050|IPR021026 Filamentous haemagglutinin family outer membrane protein, domain of unknown function DUF3739|Filamentous haemagglutinin, N-terminal|Pectin lyase fold/virulence factor PF05860|PF12545|SM00912|SSF51126|TIGR01901 BKD09_RS34530 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR024370 PBP domain G3DSA:3.40.190.10|PF12849|SSF53850 BKD09_RS34535 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000297|IPR027304 Peptidyl-prolyl cis-trans isomerase, PpiC-type|Trigger factor/SurA domain GO:0016853 G3DSA:3.10.50.40|PF00639|SSF109998|SSF54534 BKD09_RS34540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|SSF53448 BKD09_RS34545 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010916|IPR011050|IPR012334|IPR024535 Pectate lyase superfamily protein|Pectin lyase fold|Pectin lyase fold/virulence factor|TonB box, conserved site G3DSA:2.160.20.10|PF12708|PF13229|PS00430|SSF51126 BKD09_RS34550 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003696|IPR031730 Carbamoyltransferase|Carbamoyltransferase, C-terminal GO:0003824|GO:0009058 PF02543|PF16861|SSF53067 BKD09_RS34555 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004299|IPR024194|IPR028362 Alginate O-acetyltransferase AlgI|Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB|Membrane bound O-acyl transferase, MBOAT GO:0042121 PF03062|PIRSF016636|PIRSF500217 BKD09_RS34565 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001962|IPR006426|IPR014729|IPR017932|IPR029055 Asparagine synthase|Asparagine synthase, glutamine-hydrolyzing|Glutamine amidotransferase type 2 domain|Nucleophile aminohydrolases, N-terminal|Rossmann-like alpha/beta/alpha sandwich fold GO:0004066|GO:0006529 G3DSA:3.40.50.620|G3DSA:3.60.20.10|PF00733|PF13537|PIRSF001589|SSF52402|SSF56235|TIGR01536 BKD09_RS34570 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13579|SSF53756 BKD09_RS34575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF13579|PF13692|SSF53756 BKD09_RS34580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002656 Acyltransferase 3 GO:0016747 PF01757 BKD09_RS34590 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011990|IPR019734|IPR029489 O-GlcNAc transferase, C-terminal|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13414|PF13432|PF13844|SM00028|SSF48452 BKD09_RS34595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007016 O-antigen ligase-related PF04932 BKD09_RS34600 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007690 Type II secretion system, protein M GO:0006858 PF10741 BKD09_RS34605 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007813 Fimbrial assembly PilN PF05137 BKD09_RS34610 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 G3DSA:1.10.40.60|PF03934|SSF158544 BKD09_RS34620 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012902 Prokaryotic N-terminal methylation site PF13544 BKD09_RS34625 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012902 Prokaryotic N-terminal methylation site G3DSA:3.30.700.10|PF13633|SSF54523|TIGR02532 BKD09_RS34630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000983|IPR010054|IPR012902|IPR013545 Bacterial general secretion pathway protein G-type pilin|General secretion pathway protein G|Prokaryotic N-terminal methylation site|Type II secretion system protein G GO:0008565|GO:0015627|GO:0015628 G3DSA:3.30.700.10|PF08334|PF13544|PR00813|PS00409|SSF54523|TIGR01710|TIGR02532 BKD09_RS34635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003004|IPR018076 GspF/PilC family|Type II secretion system F domain PF00482|PR00812 BKD09_RS34640 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001482|IPR003593|IPR007831|IPR027417 AAA+ ATPase domain|General secretory system II, protein E, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Type II secretion system protein E GO:0005524|GO:0006810 G3DSA:3.30.450.90|G3DSA:3.40.50.300|PF00437|PF05157|PS00662|SM00382|SSF160246|SSF52540 BKD09_RS34650 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001775|IPR004846|IPR005644|IPR013356 GspD/PilQ family|NolW-like|Type II secretion system GspD|Type II/III secretion system GO:0008565|GO:0009306|GO:0015627|GO:0015628|GO:0019867 PF00263|PF03958|PR00811|TIGR02517 BKD09_RS34655 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006597|IPR011990 Sel1-like repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF08238|SM00671|SSF81901 BKD09_RS34660 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010319 Transglutaminase-like cysteine peptidase, predicted PF06035 BKD09_RS34665 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012332|IPR030930 Adhesin of bacterial autotransporter system|P22 tailspike C-terminal domain-like G3DSA:2.160.20.20|TIGR04415 BKD09_RS34670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR030930 Adhesin of bacterial autotransporter system G3DSA:2.60.40.1560|PF16168|TIGR04415 BKD09_RS34675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR005074|IPR010132|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|ATPase, type I secretion system, HlyB|P-loop containing nucleoside triphosphate hydrolase|Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0006810|GO:0008233|GO:0008565|GO:0016021|GO:0016887|GO:0030253|GO:0030256|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|G3DSA:3.90.70.10|PF00005|PF00664|PF03412|PS00211|SM00382|SSF52540|SSF90123|TIGR01846 BKD09_RS34680 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003997|IPR006144|IPR010129 RTX secretion protein D, Gram-negative bacteria|Secretion protein HlyD, conserved site|Type I secretion membrane fusion protein, HlyD family GO:0008565|GO:0009306|GO:0015031|GO:0016020|GO:0016021 G3DSA:2.40.50.100|PF13437|PF13533|PR01490|PS00543|SSF111369|TIGR01843 BKD09_RS34685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000917|IPR017849|IPR017850|IPR024607 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Sulfatase, N-terminal|Sulfatase, conserved site GO:0003824|GO:0008152|GO:0008484 G3DSA:3.30.1120.10|G3DSA:3.40.720.10|PF00884|PS00523|SSF53649 BKD09_RS34695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR001867|IPR011006|IPR011991 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF52172 BKD09_RS34700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001478|IPR001940|IPR009003|IPR011782 PDZ domain|Peptidase S1, PA clan|Peptidase S1C|Peptidase S1C, Do GO:0004252|GO:0005515|GO:0006508 G3DSA:2.30.42.10|G3DSA:2.40.10.10|PF13180|PF13365|PR00834|SM00228|SSF50156|SSF50494|TIGR02037 BKD09_RS34705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003660|IPR004089 HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|SM00283|SM00304|SSF158472|SSF58104 BKD09_RS34710 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005616 CcmH/CycL/Ccl2/NrfF family PF03918 BKD09_RS34715 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002541|IPR003567|IPR003568|IPR032523 Cytochrome c assembly protein|Cytochrome c-type biogenesis protein|Cytochrome c-type biogenesis protein CcmF|Cytochrome c-type biogenesis protein CcmF, C-terminal GO:0015232|GO:0015886|GO:0016020|GO:0017004|GO:0020037 PF01578|PF16327|PR01410|PR01411|TIGR00353 BKD09_RS34720 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004329|IPR012340 CcmE/CycJ protein|Nucleic acid-binding, OB-fold GO:0005886|GO:0017003|GO:0017004 G3DSA:2.40.50.140|MF_01959|PF03100|SSF82093 BKD09_RS34725 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011990|IPR017560|IPR019734 Cytochrome c-type biogenesis protein CcmI|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SM00028|SSF48452|TIGR03142 BKD09_RS34740 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003594|IPR003661|IPR004358|IPR013727 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Two-component sensor kinase, N-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:3.30.565.10|PF02518|PF08521|PR00344|SM00387|SSF47384|SSF55874 BKD09_RS34745 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF46894|SSF52172 BKD09_RS34755 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006164|IPR009187|IPR016194 Ku70/Ku80 beta-barrel domain|Non-homologous end joining protein Ku, prokaryotic type|SPOC-like, C-terminal domain GO:0003677|GO:0006303 G3DSA:2.40.290.10|MF_01875|PF02735|PIRSF006493|SM00559|SSF100939|TIGR02772 BKD09_RS34770 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007047 Flp/Fap pilin component PF04964 BKD09_RS34780 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000399|IPR011766|IPR012000|IPR012001|IPR029035|IPR029061 DHS-like NAD/FAD-binding domain|TPP-binding enzyme, conserved site|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0030976 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|PS00187|SSF52467|SSF52518 BKD09_RS34785 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003018|IPR003594|IPR003661|IPR004358|IPR029016 GAF domain|GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0005515|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.40|G3DSA:3.30.565.10|PF00512|PF01590|PF02518|PF13185|PR00344|SM00065|SM00387|SM00388|SSF47384|SSF55781|SSF55874 BKD09_RS34790 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012037|IPR027787|IPR027788 Alpha/beta-hydrolase family|Alpha/beta-hydrolase, N-terminal domain|Alpha/beta-hydrolase, catalytic domain PF10081|PF15420|PIRSF007542 BKD09_RS34795 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PR01036|SSF103473 BKD09_RS34800 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005358|IPR008228 Putative zinc- or iron-chelating domain containing protein|Uncharacterised conserved protein UCP006173 MF_00676|PF03692|PIRSF006173 BKD09_RS34805 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001264|IPR001460|IPR012338|IPR023346 Beta-lactamase/transpeptidase-like|Glycosyl transferase, family 51|Lysozyme-like domain|Penicillin-binding protein, transpeptidase GO:0008658 G3DSA:1.10.3810.10|G3DSA:3.40.710.10|PF00905|PF00912|SSF53955|SSF56601|TIGR02074 BKD09_RS34810 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010621|IPR012038 Domain of unknown function DUF1214|Uncharacterised conserved protein UCP009471 G3DSA:2.60.120.600|PF06742|PIRSF009471|SSF160935 BKD09_RS34815 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010679|IPR014456 Domain of unknown function DUF1254|Uncharacterised conserved protein UCP010244, integral membrane protein PF06863|PIRSF010244 BKD09_RS34820 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004045|IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF02798|SSF47616|SSF52833 BKD09_RS34825 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS34830 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925 BKD09_RS34835 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001189|IPR019831|IPR019832 Manganese/iron superoxide dismutase|Manganese/iron superoxide dismutase, C-terminal|Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 PF02777|PIRSF000349|SSF46609|SSF54719 BKD09_RS34840 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011094 Uncharacterised protein family, LppY/LpqO PF07485 BKD09_RS34845 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925 BKD09_RS34850 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS34855 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS34860 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF13738|PR00368|PR00411|SSF51905 BKD09_RS34865 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001845|IPR011991 HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12840|SM00418|SSF46785 BKD09_RS34870 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001845|IPR011991 HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12840|SM00418|SSF46785 BKD09_RS34875 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023485 Phosphotyrosine protein phosphatase I superfamily G3DSA:3.40.50.270|PF01451|SSF52788 BKD09_RS34880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000425|IPR023271 Aquaporin-like|Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 G3DSA:1.20.1080.10|PF00230|PR00783|SSF81338 BKD09_RS34885 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006659|IPR006660|IPR012336 Arsenate reductase|Arsenate reductase-like|Thioredoxin-like fold GO:0008794|GO:0055114 G3DSA:3.40.30.10|PF03960|SSF52833|TIGR00014 BKD09_RS34890 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001036|IPR004763|IPR027463 Acriflavin resistance protein|Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0006812|GO:0008324|GO:0016020|GO:0016021 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|SSF82693|SSF82714|SSF82866|TIGR00914 BKD09_RS34895 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF00529|PF16576|SSF111369|TIGR01730 BKD09_RS34900 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032693 YtkA-like domain PF13115 BKD09_RS34910 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|SSF56935 BKD09_RS34915 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006913|IPR011057 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V|Mss4-like GO:0008152|GO:0016846 G3DSA:3.90.1590.10|PF04828|SSF51316 BKD09_RS34925 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004681|IPR007387|IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein|Tripartite ATP-independent periplasmic transporter, DctQ component GO:0016021 PF04290|PF06808|TIGR00786 BKD09_RS34930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004682|IPR018389 TRAP transporter solute receptor DctP/TeaA|TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 PF03480|PIRSF006470|TIGR00787 BKD09_RS34935 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005475|IPR009014|IPR029061|IPR033248 Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase, C-terminal domain|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0008152 G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF02779|PF02780|SM00861|SSF52518|SSF52922 BKD09_RS34940 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005474|IPR029061 Thiamin diphosphate-binding fold|Transketolase, N-terminal G3DSA:3.40.50.970|PF00456|SSF52518 BKD09_RS34945 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SM00822|SSF51735 BKD09_RS34950 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS34955 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|SM00849|SSF56281 BKD09_RS34960 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS34975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019285 Protein of unknown function DUF2336 PF10098 BKD09_RS34980 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009964 Protein of unknown function DUF1491 PF07372 BKD09_RS34985 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002477 Peptidoglycan binding-like G3DSA:1.10.101.10|PF01471|SSF47090 BKD09_RS34990 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR003594|IPR003661|IPR004358|IPR013655 Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold-3|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0005515|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF02518|PF08447|PR00344|SM00091|SM00387|SM00388|SSF47384|SSF55785|SSF55874|TIGR00229 BKD09_RS34995 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic PD102069 BKD09_RS35000 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003808 Fe-S metabolism associated domain, SufE-like G3DSA:3.90.1010.10|PF02657|SSF82649 BKD09_RS35005 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008807 ROSMUCR transcriptional regulator GO:0003677|GO:0006355|GO:0008270 PF05443 BKD09_RS35015 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic PF13231 BKD09_RS35020 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001303 Class II aldolase/adducin N-terminal G3DSA:3.40.225.10|PF00596|SM01007|SSF53639 BKD09_RS35025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002933|IPR011650 Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|SSF53187 BKD09_RS35030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018584 Glycosyltransferase family 87 GO:0016758 PF09594 BKD09_RS35035 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027417|IPR033186 Helicase HerA-like C-terminal|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF05872|SSF52540 BKD09_RS35045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025567 Domain of unknown function DUF4332 G3DSA:1.10.150.20|PF14229 BKD09_RS35050 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000489|IPR006390|IPR011005 Dihydropteroate synthase|Dihydropteroate synthase-like|Pterin-binding domain GO:0004156|GO:0009396|GO:0042558|GO:0044237 G3DSA:3.20.20.20|PF00809|PS00792|PS00793|SSF51717|TIGR01496 BKD09_RS35055 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006156|IPR006157 Dihydroneopterin aldolase|Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 G3DSA:3.30.1130.10|PF02152|SM00905|SSF55620|TIGR00525|TIGR00526 BKD09_RS35060 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 G3DSA:3.30.70.560|PF01288|SSF55083|TIGR01498 BKD09_RS35065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006099|IPR006158|IPR014348|IPR016176|IPR024067 Cobalamin (vitamin B12)-binding domain|Cobalamin (vitamin B12)-dependent enzyme, catalytic|Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain|Methylmalonyl-CoA mutase small subunit, N-terminal|Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0003824|GO:0008152|GO:0016866|GO:0031419|GO:0046872 G3DSA:1.10.196.20|G3DSA:3.20.20.240|G3DSA:3.40.50.280|PF01642|SSF51703|SSF52242 BKD09_RS35070 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006913|IPR011057 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V|Mss4-like GO:0008152|GO:0016846 G3DSA:3.90.1590.10|PF04828|SSF51316 BKD09_RS35075 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006098|IPR006099|IPR006158|IPR006159|IPR014348|IPR016176 Cobalamin (vitamin B12)-binding domain|Cobalamin (vitamin B12)-dependent enzyme, catalytic|Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain|Methylmalonyl-CoA mutase, C-terminal|Methylmalonyl-CoA mutase, alpha chain, catalytic|Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0003824|GO:0004494|GO:0008152|GO:0016853|GO:0016866|GO:0031419|GO:0046872 G3DSA:3.20.20.240|G3DSA:3.40.50.280|PF01642|PF02310|PS00544|SSF51703|SSF52242|TIGR00640|TIGR00641 BKD09_RS35080 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 G3DSA:3.30.460.10|PF01909|SSF81301 BKD09_RS35085 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021729|IPR025303 Domain of unknown function DUF3298|Domain of unknown function DUF4163 G3DSA:3.30.565.40|G3DSA:3.90.640.20|PF11738 BKD09_RS35090 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 BKD09_RS35095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009936 Protein of unknown function DUF1468 PF07331 BKD09_RS35100 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002823 Protein of unknown function DUF112, transmembrane PF01970 BKD09_RS35105 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003661|IPR005129|IPR027417 P-loop containing nucleoside triphosphate hydrolase|SIMIBI class G3E GTPase, ArgK/MeaB|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0003924|GO:0005525|GO:0007165 G3DSA:1.10.287.130|G3DSA:1.20.5.170|G3DSA:3.40.50.300|PF03308|SSF52540|TIGR00750 BKD09_RS35110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000816|IPR016125 Peptidase C15, pyroglutamyl peptidase I|Peptidase C15, pyroglutamyl peptidase I-like GO:0005829|GO:0006508|GO:0016920 G3DSA:3.40.630.20|PF01470|PIRSF015592|PR00706|SSF53182 BKD09_RS35115 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006626|IPR011050|IPR012334|IPR022388|IPR022444 Cofactor-binding repeat, putative|Conserved hypothetical protein CHP03808|Parallel beta-helix repeat|Pectin lyase fold|Pectin lyase fold/virulence factor G3DSA:2.160.20.10|PF13229|SM00710|SSF51126|TIGR03807|TIGR03808 BKD09_RS35120 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR022268 Conserved hypothetical protein CHP03809 TIGR03809 BKD09_RS35125 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000209|IPR015500|IPR022398|IPR023827 Peptidase S8, subtilisin, Asp-active site|Peptidase S8, subtilisin, His-active site|Peptidase S8, subtilisin-related|Peptidase S8/S53 domain GO:0004252|GO:0006508 G3DSA:3.40.50.200|PF00082|PR00723|PS00136|PS00137|SSF52743 BKD09_RS35135 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|SSF88659|SSF88946|TIGR02937 BKD09_RS35140 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000160|IPR029787 GGDEF domain|Nucleotide cyclase G3DSA:3.30.70.270|PF00990|SM00267|SSF55073|TIGR00254 BKD09_RS35145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019285 Protein of unknown function DUF2336 PF10098 BKD09_RS35150 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009495 Protein of unknown function DUF1109 PF06532 BKD09_RS35155 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|SSF88659|SSF88946|TIGR02937 BKD09_RS35165 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001753|IPR018376|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily|Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|PS00166|SSF52096 BKD09_RS35170 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003423|IPR010130 Outer membrane efflux protein|Type I secretion outer membrane protein, TolC GO:0005215|GO:0006810|GO:0019867 G3DSA:1.20.1600.10|PF02321|SSF56954|TIGR01844 BKD09_RS35175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|SSF52540 BKD09_RS35180 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006680|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase GO:0016787 G3DSA:3.20.20.140|PF04909|SSF51556 BKD09_RS35185 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001036|IPR004763|IPR027463 Acriflavin resistance protein|Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0006812|GO:0008324|GO:0016020|GO:0016021 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|SSF82693|SSF82714|SSF82866|TIGR00914 BKD09_RS35190 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|SSF111369|TIGR01730 BKD09_RS35195 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.40.50.10540|PF02515|SSF89796 BKD09_RS35205 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00081|SSF51735 BKD09_RS35215 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003141|IPR004013|IPR004365|IPR004805|IPR011708|IPR012340|IPR016195|IPR023073|IPR029460 Bacterial DNA polymerase III, alpha subunit|DNA polymerase III, alpha subunit|DNA polymerase, error-prone|DNA polymerase, helix-hairpin-helix motif|Nucleic acid-binding, OB-fold|OB-fold nucleic acid binding domain, AA-tRNA synthetase-type|PHP domain|Polymerase/histidinol phosphatase, N-terminal|Polymerase/histidinol phosphatase-like GO:0003676|GO:0003677|GO:0003824|GO:0003887|GO:0006260|GO:0008408 G3DSA:2.40.50.140|G3DSA:3.20.20.140|MF_01902|PF01336|PF02811|PF07733|PF14579|SM00481|SSF89550|TIGR00594 BKD09_RS35220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001126 UmuC domain GO:0006281 G3DSA:1.10.150.20|PF00817|SSF56672 BKD09_RS35225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR017026|IPR027417 Inducible mutagenesis protein A|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PIRSF034285|SSF52540 BKD09_RS35230 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006638|IPR007197|IPR010994|IPR013785|IPR023874 Aldolase-type TIM barrel|DNA modification/repair radical SAM protein, putative|Elongator protein 3/MiaB/NifB|Radical SAM|RuvA domain 2-like GO:0003824|GO:0051536 G3DSA:1.10.150.280|G3DSA:3.20.20.70|PF04055|SM00729|SSF102114|SSF47781|TIGR03916 BKD09_RS35235 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005122|IPR005273|IPR023875|IPR025404 DNA metabolism protein, putative|Domain of unknown function DUF4130|Uracil-DNA glycosylase, family 4 domain|Uracil-DNA glycosylase-like G3DSA:3.40.470.10|PF03167|PF13566|SM00986|SM00987|SSF52141|TIGR00758|TIGR03914|TIGR03915 BKD09_RS35240 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 PF01384 BKD09_RS35245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002933|IPR011650|IPR017439 Amidohydrolase|Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PIRSF005962|SSF53187|SSF55031|TIGR01891 BKD09_RS35250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000172|IPR007867|IPR012132|IPR023753 FAD/NAD(P)-binding domain|Glucose-methanol-choline oxidoreductase|Glucose-methanol-choline oxidoreductase, C-terminal|Glucose-methanol-choline oxidoreductase, N-terminal GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.50.50.60|PF00732|PF05199|PIRSF000137|SSF51905|SSF54373 BKD09_RS35255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|SSF53474 BKD09_RS35260 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|SSF56300 BKD09_RS35265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008972|IPR028096 Cupredoxin|EfeO-type cupredoxin-like domain G3DSA:2.60.40.420|PF13473|SSF49503 BKD09_RS35270 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|SSF88659|SSF88946|TIGR02937 BKD09_RS35275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027383 Putative zinc-finger PF13490 BKD09_RS35280 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005814|IPR015421|IPR015422|IPR015424 Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0008483|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00202|PS00600|SSF53383 BKD09_RS35285 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019223 Domain of unknown function DUF2147 PF09917 BKD09_RS35290 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004869|IPR017841 Hopanoid biosynthesis associated RND transporter-like protein HpnN|Membrane transport protein, MMPL domain GO:0016020 G3DSA:1.20.1640.10|PF03176|SSF82866|TIGR03480 BKD09_RS35295 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 MF_00191|PF02401|TIGR00216 BKD09_RS35300 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007197|IPR013785|IPR017833|IPR022563 Aldolase-type TIM barrel|Domain of unknown function DUF3463|Hopanoid biosynthesis associated radical SAM protein HpnH|Radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|PF04055|PF11946|SSF102114|TIGR03470 BKD09_RS35310 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000845|IPR017831 Hopanoid-associated phosphorylase HpnG|Nucleoside phosphorylase domain GO:0003824|GO:0009116 G3DSA:3.40.50.1580|PF01048|SSF53167|TIGR03468 BKD09_RS35315 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002365|IPR006400|IPR008930|IPR018333|IPR032696|IPR032697 Squalene cyclase|Squalene cyclase, C-terminal|Squalene cyclase, N-terminal|Squalene hopene cyclase|Terpene synthase, conserved site|Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid GO:0016866|GO:0019746 G3DSA:1.50.10.20|PF13243|PF13249|PS01074|SSF48239|TIGR01507|TIGR01787 BKD09_RS35320 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002937|IPR016040|IPR017830|IPR023753 Amine oxidase|FAD/NAD(P)-binding domain|NAD(P)-binding domain|Squalene-associated FAD-dependent desaturase GO:0016491|GO:0055114 G3DSA:3.40.50.720|PF01593|SSF51905|TIGR03467 BKD09_RS35325 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002060|IPR008949|IPR017828|IPR019845 Isoprenoid synthase domain|Squalene/phytoene synthase|Squalene/phytoene synthase HpnD|Squalene/phytoene synthase, conserved site GO:0009058|GO:0016117|GO:0016740|GO:0016765|GO:0016767 G3DSA:1.10.600.10|PF00494|PS01044|PS01045|SSF48576|TIGR03465 BKD09_RS35330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002060|IPR008949|IPR017827 Isoprenoid synthase domain|Squalene synthase HpnC|Squalene/phytoene synthase GO:0009058|GO:0016740 G3DSA:1.10.600.10|PF00494|SSF48576|TIGR03464 BKD09_RS35335 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001893 Cysteine-rich Golgi apparatus protein 1 repeat GO:0016020 PF00839 BKD09_RS35350 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004869 Membrane transport protein, MMPL domain GO:0016020 G3DSA:1.20.1640.10|PF03176|SSF82866 BKD09_RS35355 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 MF_00601|PF05985|PIRSF018982 BKD09_RS35360 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006158|IPR006638|IPR007197|IPR023404|IPR025274 Cobalamin (vitamin B12)-binding domain|Domain of unknown function DUF4070|Elongator protein 3/MiaB/NifB|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0031419|GO:0046872|GO:0051536 G3DSA:3.80.30.20|PF02310|PF04055|PF13282|SM00729|SSF102114 BKD09_RS35365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010628|IPR013785 Aldolase-type TIM barrel|Ethanolamine ammonia lyase large subunit GO:0003824|GO:0006520|GO:0008851 G3DSA:1.10.220.70|G3DSA:2.30.170.30|G3DSA:3.20.20.70|PF06751|PIRSF018788 BKD09_RS35370 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003660|IPR004089|IPR004090|IPR024478 4HB MCP domain|Chemotaxis methyl-accepting receptor|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PF12729|PR00260|SM00283|SM00304|SSF58104 BKD09_RS35375 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13671|SSF52540 BKD09_RS35390 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|SSF47203|SSF56645 BKD09_RS35395 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS35405 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005325 Protein of unknown function DUF308, membrane PF03729 BKD09_RS35410 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004099|IPR016156|IPR017941|IPR023753 FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain|Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0045454|GO:0050660|GO:0051537|GO:0055114 G3DSA:2.102.10.10|G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF00355|PF07992|PR00368|PR00411|SSF50022|SSF51905|SSF55424 BKD09_RS35415 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001474|IPR018234|IPR020602 GTP cyclohydrolase I|GTP cyclohydrolase I domain|GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 G3DSA:1.10.286.10|G3DSA:3.30.1130.10|MF_00223|PF01227|PS00859|PS00860|SSF55620|TIGR00063 BKD09_RS35420 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR000639|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Epoxide hydrolase-like GO:0003824 G3DSA:3.40.50.1820|PF00561|PR00412|SSF53474 BKD09_RS35425 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003607|IPR006674 HD domain|HD/PDEase domain G3DSA:1.10.3210.10|PF01966|SM00471|SSF109604 BKD09_RS35430 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002931|IPR013589 Bacterial transglutaminase-like, N-terminal|Transglutaminase-like G3DSA:3.90.260.10|PF01841|PF08379|SM00460|SSF54001 BKD09_RS35435 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007296|IPR025841 Circularly permuted ATP-grasp type 2|Domain of unknown function DUF403 PF04168|PF14403|SSF56059 BKD09_RS35440 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002931|IPR013589|IPR018667 Bacterial transglutaminase-like, N-terminal|Domain of unknown function DUF2126|Transglutaminase-like G3DSA:3.90.260.10|PF01841|PF08379|PF09899|SM00460|SSF54001 BKD09_RS35445 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002921|IPR029058 Alpha/Beta hydrolase fold|Fungal lipase-like domain GO:0006629 G3DSA:3.40.50.1820|PF01764|SSF53474 BKD09_RS35450 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007392|IPR013974 D-galactarate/Altronate dehydratase, C-terminal|SAF domain GO:0016829 PF04295|PF08666|SM00858 BKD09_RS35455 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005000|IPR015813 HpcH/HpaI aldolase/citrate lyase domain|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 G3DSA:3.20.20.60|PF03328|SSF51621 BKD09_RS35460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 G3DSA:1.10.1530.10|G3DSA:3.30.1370.60|PF02615|SSF89733 BKD09_RS35465 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS35470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851|IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter, permease|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005215|GO:0005524|GO:0006810|GO:0016020|GO:0016887 G3DSA:3.40.50.300|PF00005|PF02653|SM00382|SSF52540 BKD09_RS35475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS35480 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000709|IPR028081|IPR028082 Leu/Ile/Val-binding protein|Leucine-binding protein domain|Periplasmic binding protein-like I GO:0006865 G3DSA:3.40.50.2300|PF13458|PR00337|SSF53822 BKD09_RS35485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000835|IPR011991|IPR012712 Homoprotocatechuate degradation transcriptional regulator HpaR|MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006355|GO:0010124|GO:0045892 G3DSA:1.10.10.10|PF12802|SM00347|SSF46785|TIGR02337 BKD09_RS35490 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011234|IPR012690 2-oxo-hepta-3-ene-1,7-dioic acid hydratase|Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152|GO:0019439 G3DSA:3.90.850.10|SSF56529|TIGR02312 BKD09_RS35495 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004220|IPR014347 5-carboxymethyl-2-hydroxymuconate isomerase|Tautomerase/MIF superfamily GO:0008704|GO:0019439 G3DSA:3.30.429.10|PF02962|SSF55331 BKD09_RS35500 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011985|IPR015590|IPR016161|IPR016162|IPR016163|IPR029510 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase|Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0018480|GO:0055114|GO:1901023 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00687|SSF53720|TIGR02299 BKD09_RS35505 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000486|IPR004360|IPR011981|IPR029068 3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD|Extradiol ring-cleavage dioxygenase, class I /II|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain GO:0003824|GO:0006725|GO:0008198|GO:0055114 G3DSA:3.10.180.10|PF00903|PS00082|SSF54593|TIGR02295 BKD09_RS35510 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 G3DSA:3.90.850.10|PF01557|SSF56529 BKD09_RS35515 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000399|IPR011766|IPR012000|IPR012001|IPR029035|IPR029061 DHS-like NAD/FAD-binding domain|TPP-binding enzyme, conserved site|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0030976 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|PS00187|SSF52467|SSF52518 BKD09_RS35520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like G3DSA:2.60.120.590|PF13532|SSF51197 BKD09_RS35525 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018655 Protein of unknown function DUF2086 PF09859 BKD09_RS35530 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011234|IPR021269 Fumarylacetoacetase, C-terminal-related|Protein of unknown function DUF2848 GO:0003824|GO:0008152 PF11010|SSF56529 BKD09_RS35535 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023631 Amidase signature domain G3DSA:3.90.1300.10|PF01425|SSF75304 BKD09_RS35540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002878|IPR012340|IPR022002 Domain of unknown function DUF35, OB-fold, C-terminal|Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal|Nucleic acid-binding, OB-fold PF01796|PF12172|SSF50249 BKD09_RS35545 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002155|IPR016039 Thiolase|Thiolase-like GO:0003824|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PIRSF000429|SSF53901 BKD09_RS35550 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SM00822|SSF51735 BKD09_RS35555 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005511|IPR011042|IPR013658 SMP-30/Gluconolactonase/LRE-like region|Senescence marker protein-30 (SMP-30)|Six-bladed beta-propeller, TolB-like G3DSA:2.120.10.30|PF08450|PR01790|SSF63829 BKD09_RS35560 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015813|IPR018129|IPR021135|IPR022805|IPR033129 Phosphoenolpyruvate carboxylase|Phosphoenolpyruvate carboxylase, His active site|Phosphoenolpyruvate carboxylase, Lys active site|Phosphoenolpyruvate carboxylase, bacterial/plant-type|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0006099|GO:0008964|GO:0015977 G3DSA:1.20.1440.90|MF_00595|PF00311|PR00150|PS00393|PS00781|SSF51621 BKD09_RS35565 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005185|IPR031308 Inner membrane component domain|Uncharacterised conserved protein UCP028777 PF03733|PIRSF028777 BKD09_RS35570 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 G3DSA:1.20.1540.10|PF01694|SSF144091 BKD09_RS35575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001753|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|SSF52096 BKD09_RS35580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801 BKD09_RS35585 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001753|IPR018376|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily|Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|PS00166|SSF52096 BKD09_RS35590 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00081|SSF51735 BKD09_RS35595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR025110 AMP-binding enzyme C-terminal domain|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|SSF56801 BKD09_RS35600 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|SSF47203|SSF56645 BKD09_RS35605 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001753|IPR014748|IPR018376|IPR029045 ClpP/crotonase-like domain|Crontonase, C-terminal|Crotonase superfamily|Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 G3DSA:1.10.12.10|G3DSA:3.90.226.10|PF00378|PS00166|SSF52096 BKD09_RS35615 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002575|IPR011009 Aminoglycoside phosphotransferase|Protein kinase-like domain G3DSA:3.90.1200.10|PF01636|SSF56112 BKD09_RS35620 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001753|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|SSF52096 BKD09_RS35625 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SM00822|SSF51735 BKD09_RS35630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|SSF54593 BKD09_RS35635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|SSF47203|SSF56645 BKD09_RS35640 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002563|IPR012349 FMN-binding split barrel|Flavin reductase like domain GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF01613|SM00903|SSF50475 BKD09_RS35645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004045|IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF02798|SSF47616|SSF52833 BKD09_RS35650 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF13738|PR00411|SSF51905 BKD09_RS35655 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004136|IPR013785 Aldolase-type TIM barrel|Nitronate monooxygenase GO:0003824|GO:0018580|GO:0055114 G3DSA:3.20.20.70|PF03060|SSF51412 BKD09_RS35660 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016039 Thiolase-like GO:0003824|GO:0008152 G3DSA:3.40.47.10|SSF53901 BKD09_RS35665 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|SSF111369|TIGR01730 BKD09_RS35670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|SSF82693|SSF82714|SSF82866 BKD09_RS35675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004089|IPR004090|IPR024478 4HB MCP domain|Chemotaxis methyl-accepting receptor|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020 G3DSA:1.10.287.950|PF00015|PF12729|PR00260|SM00283|SSF158472|SSF58104 BKD09_RS35680 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010737|IPR031475 Putative nucleotide-binding C-terminal domain|Putative sugar-binding, N-terminal domain PF07005|PF17042|SSF142764 BKD09_RS35685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013022|IPR026040 Hydroxypyruvate isomerase-like|Xylose isomerase-like, TIM barrel domain G3DSA:3.20.20.150|PF01261|PIRSF006241|SSF51658 BKD09_RS35690 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002204|IPR006115|IPR008927|IPR013328|IPR015815|IPR016040|IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain|3-hydroxyisobutyrate dehydrogenase-related|3-hydroxyisobutyrate dehydrogenase-related, conserved site|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, NADP-binding|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0004616|GO:0016491|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF03446|PF14833|PIRSF000103|PS00895|SSF48179|SSF51735 BKD09_RS35695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001303 Class II aldolase/adducin N-terminal G3DSA:3.40.225.10|PF00596|SM01007|SSF53639 BKD09_RS35700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|PS00211|SM00382|SSF52540 BKD09_RS35705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|SM00382|SSF52540 BKD09_RS35710 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS35715 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS35720 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS35725 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009906|IPR016938 Protein of unknown function DUF1445|Uncharacterised protein family UPF0317 G3DSA:3.40.1640.10|MF_01830|PF07286|PIRSF029755|SSF160920 BKD09_RS35730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS35735 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002933|IPR010158|IPR011650 Amidase, carbamoylase-type|Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787|GO:0016813 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PIRSF001235|SSF53187|SSF55031|TIGR01879 BKD09_RS35740 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006140|IPR016040 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|NAD(P)-binding domain GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF02826|SSF51735|SSF52283 BKD09_RS35745 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 G3DSA:1.10.1530.10|G3DSA:3.30.1370.60|PF02615|SSF89733 BKD09_RS35750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR020941 Suppressor of fused-like domain PF05076 BKD09_RS35755 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011829|IPR019818|IPR024084 Isocitrate/isopropylmalate dehydrogenase, conserved site|Isopropylmalate dehydrogenase-like domain|Tartrate dehydrogenase GO:0000287|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.718.10|PF00180|PS00470|SM01329|SSF53659|TIGR02089 BKD09_RS35760 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00081|SSF51735 BKD09_RS35765 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023631 Amidase signature domain G3DSA:3.90.1300.10|PF01425|SSF75304 BKD09_RS35775 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 BKD09_RS35780 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 BKD09_RS35785 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000281|IPR001347|IPR009057|IPR011991 Helix-turn-helix protein RpiR|Homeodomain-like|Sugar isomerase (SIS)|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0005975|GO:0006355|GO:0030246 G3DSA:1.10.10.10|G3DSA:3.40.50.10490|PF01380|PF01418|SSF46689|SSF53697 BKD09_RS35790 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005814|IPR015421|IPR015422|IPR015424 Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0008483|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00202|SSF53383 BKD09_RS35795 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001638 Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF00497|SM00062|SSF53850 BKD09_RS35805 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893|IPR025996 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal|WHG domain GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PF13305|SSF46689|SSF48498 BKD09_RS35810 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008868|IPR027417 Bacterial TniB|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF05621|SSF52540 BKD09_RS35815 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 BKD09_RS35825 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13683|SSF53098 BKD09_RS35850 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|SSF52540 BKD09_RS35865 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|SSF56300 BKD09_RS35910 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003953|IPR023753|IPR027477 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain|Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|G3DSA:3.90.700.10|PF00890|PR00411|SSF51905|SSF56425 BKD09_RS35915 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013022 Xylose isomerase-like, TIM barrel domain G3DSA:3.20.20.150|PF01261|SSF51658 BKD09_RS35925 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001874|IPR018509 Dehydroquinase, class II|Dehydroquinase, class II, conserved site GO:0003855 G3DSA:3.40.50.9100|MF_00169|PD004527|PF01220|PIRSF001399|PS01029|SSF52304 BKD09_RS35930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004681|IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein GO:0016021 PF06808|PIRSF006066|TIGR00786 BKD09_RS35935 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290 BKD09_RS35940 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004682|IPR018389 TRAP transporter solute receptor DctP/TeaA|TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 PF03480|PIRSF006470|TIGR00787 BKD09_RS35945 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|SM00345|SM00895|SSF46785|SSF48008 BKD09_RS35950 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000587|IPR000994|IPR028980|IPR029149 Creatinase, N-terminal|Creatinase/Aminopeptidase P, N-terminal|Creatinase/Aminopeptidase P/Spt16, N-terminal|Peptidase M24, structural domain GO:0016787 G3DSA:3.40.350.10|G3DSA:3.90.230.10|PF00557|PF01321|SSF53092|SSF55920 BKD09_RS35955 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005511|IPR011042|IPR013658 SMP-30/Gluconolactonase/LRE-like region|Senescence marker protein-30 (SMP-30)|Six-bladed beta-propeller, TolB-like G3DSA:2.120.10.30|PF08450|PR01790|SSF63829 BKD09_RS35975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|PR00034|SM00419|SSF46785|SSF51206 BKD09_RS35980 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 BKD09_RS35990 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006638|IPR007197|IPR023404 Elongator protein 3/MiaB/NifB|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0051536 G3DSA:3.80.30.20|PF04055|SM00729|SSF102114 BKD09_RS35995 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001128|IPR002397|IPR017972 Cytochrome P450|Cytochrome P450, B-class|Cytochrome P450, conserved site GO:0005506|GO:0016705|GO:0020037|GO:0055114 G3DSA:1.10.630.10|PF00067|PR00359|PS00086|SSF48264 BKD09_RS36000 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003706|IPR025299 CstA, C-terminal domain|CstA, N-terminal domain GO:0009267|GO:0016020 PF02554|PF13722 BKD09_RS36005 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|SSF55729 BKD09_RS36025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009959|IPR032710 NTF2-like domain|Polyketide cyclase SnoaL-like domain G3DSA:3.10.450.50|PF12680|SSF54427 BKD09_RS36030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023346 Lysozyme-like domain G3DSA:1.10.530.10|SSF53955 BKD09_RS36035 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005490|IPR016915 L,D-transpeptidase catalytic domain|Uncharacterised conserved protein UCP029342 GO:0016740 G3DSA:2.40.440.10|PF03734|PIRSF029342|SSF141523 BKD09_RS36050 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018712 Domain of unknown function DUF2235 PF09994 BKD09_RS36055 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006076|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01266|SSF51905 BKD09_RS36060 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016923|IPR019251 Domain of unknown function DUF2231, transmembrane|Uncharacterised conserved protein UCP029509, membrane PF09990|PIRSF029509 BKD09_RS36065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011041|IPR011042|IPR012938 Glucose/Sorbosone dehydrogenase|Six-bladed beta-propeller, TolB-like|Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824|GO:0005975|GO:0016901|GO:0048038 G3DSA:2.120.10.30|PF07995|SSF50952 BKD09_RS36085 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR011102 PAS domain|Signal transduction histidine kinase, HWE region GO:0004673 G3DSA:3.30.450.20|PF07536|SM00911|SSF55785 BKD09_RS36105 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004670|IPR023171 Na+/H+ antiporter NhaA|Na/H antiporter domain GO:0006814|GO:0006885|GO:0016021 G3DSA:1.20.1530.10|MF_01844|PF06965|TIGR00773 BKD09_RS36110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 BKD09_RS36145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032808 DoxX family PF07681 BKD09_RS36155 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000979|IPR020935|IPR024654|IPR029052 Calcineurin-like phosphoesterase domain, lpxH type|Metallo-dependent phosphatase-like|Phosphodiesterase MJ0936/Vps29|Phosphodiesterase YfcE, conserved site G3DSA:3.60.21.10|PF12850|PS01269|SSF56300|TIGR00040 BKD09_RS36160 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006164|IPR009187|IPR016194 Ku70/Ku80 beta-barrel domain|Non-homologous end joining protein Ku, prokaryotic type|SPOC-like, C-terminal domain GO:0003677|GO:0006303 G3DSA:2.40.290.10|MF_01875|PF02735|PIRSF006493|SM00559|SSF100939|TIGR02772 BKD09_RS36175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007487 ABC transporter, substrate-binding protein G3DSA:3.40.50.2300|PF04392 BKD09_RS36220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005656 MmgE/PrpD GO:0016829 G3DSA:3.30.1330.120|PF03972|SSF103378 BKD09_RS36225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:1.20.120.20 BKD09_RS36235 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009937 Putative Actinobacterial Holin-X, holin superfamily III PF07332 BKD09_RS36245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007341 Transglycosylase-associated protein GO:0016021 PF04226 BKD09_RS36250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009282|IPR027405 Protein of unknown function DUF937|YidB-like G3DSA:1.10.10.690|PF06078|SSF140804 BKD09_RS36255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SSF53041 BKD09_RS36265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00081|PS00061|SSF51735 BKD09_RS36270 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011032|IPR013149|IPR013154|IPR016040|IPR027399 Alcohol dehydrogenase GroES-associated|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PF13823|SSF50129|SSF51735 BKD09_RS36275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 G3DSA:3.40.640.10 BKD09_RS36280 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009078|IPR010287|IPR012347 Domain of unknown function DUF892|Ferritin-like superfamily|Ferritin-related G3DSA:1.20.1260.10|PF05974|SSF47240 BKD09_RS36295 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002931|IPR013589 Bacterial transglutaminase-like, N-terminal|Transglutaminase-like G3DSA:3.90.260.10|PF01841|PF08379|SM00460|SSF54001 BKD09_RS36305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase G3DSA:1.20.144.10|PF01569|SM00014|SSF48317 BKD09_RS36315 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|SSF53474 BKD09_RS36320 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR003594|IPR003661|IPR004358|IPR013767 Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0006355|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF00989|PF02518|PR00344|SM00387|SM00388|SSF47384|SSF55785|SSF55874|TIGR00229 BKD09_RS36325 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010126|IPR029058 Alpha/Beta hydrolase fold|Esterase, PHB depolymerase GO:0005576|GO:0016787 G3DSA:3.40.50.1820|PF10503|SSF53474|TIGR01840 BKD09_RS36330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010985 Ribbon-helix-helix GO:0006355 SSF47598 BKD09_RS36350 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.30.70.20|PF13459|SSF54862 BKD09_RS36355 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001128|IPR002397|IPR017972 Cytochrome P450|Cytochrome P450, B-class|Cytochrome P450, conserved site GO:0005506|GO:0016705|GO:0020037|GO:0055114 G3DSA:1.10.630.10|PF00067|PR00359|PR00385|PS00086|SSF48264 BKD09_RS36360 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005828|IPR005829|IPR020846 Major facilitator superfamily domain|Major facilitator, sugar transporter-like|Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1250.20|PF00083|PS00217|SSF103473 BKD09_RS36365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 G3DSA:3.90.420.10|PF00174|SSF56524 BKD09_RS36370 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003718|IPR015946|IPR022742|IPR029058 Alpha/Beta hydrolase fold|K homology domain-like, alpha/beta|OsmC/Ohr family|Serine aminopeptidase, S33 G3DSA:3.30.300.20|G3DSA:3.40.50.1820|PF02566|PF12146|SSF53474|SSF82784 BKD09_RS36375 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR004839|IPR011991|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0003824|GO:0006355|GO:0009058|GO:0030170 G3DSA:1.10.10.10|G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PF00392|PR00035|SM00345|SSF46785|SSF53383 BKD09_RS36380 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 BKD09_RS36385 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007272 Sulphur transport domain PF04143 BKD09_RS36390 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011032|IPR013149|IPR016040|IPR020843 Alcohol dehydrogenase, C-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|SM00829|SSF50129|SSF51735 BKD09_RS36395 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR011880|IPR028154 AMP-dependent ligase, C-terminal|AMP-dependent synthetase/ligase|Phenylacetate-CoA ligase GO:0003824|GO:0008152|GO:0010124|GO:0047475 G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF14535|PIRSF006444|SSF56801|TIGR02155 BKD09_RS36400 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003736|IPR006683|IPR011973|IPR029069 HotDog domain|Phenylacetic acid degradation protein PaaD|Phenylacetic acid degradation-related domain|Thioesterase domain GO:0016790 G3DSA:3.10.129.10|PF03061|SSF54637|TIGR00369|TIGR02286 BKD09_RS36405 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001041|IPR001433|IPR001709|IPR001834|IPR006058|IPR008333|IPR011884|IPR012675|IPR017938 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|Flavoprotein pyridine nucleotide cytochrome reductase|NADH:cytochrome b5 reductase (CBR)|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Phenylacetate-CoA oxygenase/reductase, PaaK subunit|Riboflavin synthase-like beta-barrel GO:0009055|GO:0010124|GO:0016491|GO:0051536|GO:0051537|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.10.20.30|G3DSA:3.40.50.80|PF00111|PF00175|PF00970|PR00371|PR00406|PS00197|SSF52343|SSF54292|SSF63380|TIGR02160 BKD09_RS36410 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002744|IPR011883 Domain of unknown function DUF59|Phenylacetate-CoA oxygenase, PaaJ subunit PF01883|SSF117916|TIGR02159 BKD09_RS36415 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007814|IPR009078|IPR011882|IPR012347 1,2-phenylacetyl-CoA epoxidase, subunit A/C|1,2-phenylacetyl-CoA epoxidase, subunit C|Ferritin-like superfamily|Ferritin-related GO:0010124 G3DSA:1.20.1260.10|PF05138|PIRSF037834|SSF47240|TIGR02158 BKD09_RS36420 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009359 Phenylacetic acid degradation B PF06243|PIRSF030200|TIGR02157 BKD09_RS36425 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007814|IPR009078|IPR011881|IPR012347 1,2-phenylacetyl-CoA epoxidase, subunit A|1,2-phenylacetyl-CoA epoxidase, subunit A/C|Ferritin-like superfamily|Ferritin-related GO:0010124|GO:0097266 G3DSA:1.20.1260.10|PF05138|SSF47240|TIGR02156 BKD09_RS36430 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011965|IPR011991|IPR012906|IPR013225 PaaX-like, C-terminal|PaaX-like, N-terminal|Phenylacetic acid degradation operon negative regulatory protein PaaX|Winged helix-turn-helix DNA-binding domain GO:0006351 G3DSA:1.10.10.10|PF07848|PF08223|PIRSF020623|SSF46785|TIGR02277 BKD09_RS36435 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007751|IPR029058 Alpha/Beta hydrolase fold|Domain of unknown function DUF676, lipase-like G3DSA:3.40.50.1820|PF05057|SSF53474 BKD09_RS36440 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007383 Protein of unknown function DUF445 PF04286 BKD09_RS36445 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010234|IPR018968 Phasin|Phasin, subfamily 2 PF09361|TIGR01985 BKD09_RS36450 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 BKD09_RS36455 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF00561|SSF53474 BKD09_RS36465 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF00561|SSF53474 BKD09_RS36470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009959|IPR032710 NTF2-like domain|Polyketide cyclase SnoaL-like domain G3DSA:3.10.450.50|PF12680|SSF54427 BKD09_RS36475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF01564|SSF53335 BKD09_RS36480 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001094|IPR001128|IPR001433|IPR001709|IPR003097|IPR008254|IPR017938|IPR017972|IPR023173|IPR023206|IPR029039 Bifunctional cytochrome P450/NADPH--cytochrome P450 reductase|Cytochrome P450|Cytochrome P450, conserved site|FAD-binding, type 1|Flavodoxin-like|Flavodoxin/nitric oxide synthase|Flavoprotein pyridine nucleotide cytochrome reductase|Flavoprotein-like domain|NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3|Oxidoreductase FAD/NAD(P)-binding|Riboflavin synthase-like beta-barrel GO:0003958|GO:0005506|GO:0010181|GO:0016491|GO:0016705|GO:0020037|GO:0055114|GO:0070330 G3DSA:1.10.630.10|G3DSA:1.20.990.10|G3DSA:2.40.30.10|G3DSA:3.40.50.360|G3DSA:3.40.50.80|PF00067|PF00175|PF00258|PF00667|PIRSF000209|PR00369|PR00371|PS00086|SSF48264|SSF52218|SSF52343|SSF63380 BKD09_RS36485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR000639|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Epoxide hydrolase-like GO:0003824 G3DSA:3.40.50.1820|PF00561|PR00412|SSF53474 BKD09_RS36490 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004255|IPR009721|IPR014292 Acyltransferase, WS/DGAT/MGAT|O-acyltransferase WSD1, C-terminal|O-acyltransferase, WSD1, N-terminal GO:0004144|GO:0016746|GO:0045017 PF03007|PF06974|SSF52777|TIGR02946 BKD09_RS36495 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029058 Alpha/Beta hydrolase fold G3DSA:3.40.50.1820|SSF53474 BKD09_RS36510 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|SSF53850 BKD09_RS36515 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS36520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR025966 ABC transporter type 1, transmembrane domain MetI-like|Oligopeptide transport permease C-like, N-terminal domain GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PF12911|SSF161098 BKD09_RS36525 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540|TIGR01727 BKD09_RS36530 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540|TIGR01727 BKD09_RS36535 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000101|IPR029055 Gamma-glutamyltranspeptidase|Nucleophile aminohydrolases, N-terminal GO:0003840|GO:0006749 PF01019|PR01210|SSF56235 BKD09_RS36540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010430|IPR029055 Nucleophile aminohydrolases, N-terminal|Protein of unknown function DUF1028 G3DSA:3.60.20.10|PF06267|SSF56235 BKD09_RS36545 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540|TIGR01727 BKD09_RS36550 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540|TIGR01727 BKD09_RS36555 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|SSF53850 BKD09_RS36560 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS36565 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR025966 ABC transporter type 1, transmembrane domain MetI-like|Oligopeptide transport permease C-like, N-terminal domain GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PF12911|SSF161098 BKD09_RS36575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR001789|IPR011006|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|CheY-like superfamily|Nucleotide cyclase|Signal transduction response regulator, receiver domain GO:0000160|GO:0009190|GO:0016849|GO:0035556 G3DSA:3.30.70.1230|G3DSA:3.40.50.2300|PF00072|PF00211|SM00044|SM00448|SSF52172|SSF55073 BKD09_RS36580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 BKD09_RS36585 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003018|IPR003594|IPR003660|IPR003661|IPR004358|IPR029016|IPR033479 Double Cache domain 1|GAF domain|GAF domain-like|HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0004871|GO:0005515|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.450.40|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PF02743|PF13185|PR00344|SM00065|SM00304|SM00387|SM00388|SSF158472|SSF47384|SSF55781|SSF55874 BKD09_RS36590 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|G3DSA:3.30.70.1440|PF00873|PR00702|SSF82693|SSF82714|SSF82866 BKD09_RS36595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF00529|PF16576|SSF111369|TIGR01730 BKD09_RS36600 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR015893|IPR023772 DNA-binding HTH domain, TetR-type|DNA-binding HTH domain, TetR-type, conserved site|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|PS01081|SSF46689 BKD09_RS36605 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011766|IPR029061 Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 G3DSA:3.40.50.970|PF02775|SSF52518 BKD09_RS36610 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012001|IPR029061 Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 G3DSA:3.40.50.970|PF02776|SSF52518 BKD09_RS36615 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001128|IPR002397 Cytochrome P450|Cytochrome P450, B-class GO:0005506|GO:0016705|GO:0020037|GO:0055114 G3DSA:1.10.630.10|PF00067|PR00359|SSF48264 BKD09_RS36620 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005814|IPR010164|IPR015421|IPR015422|IPR015424 Aminotransferase class-III|Ornithine aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0008483|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00202|PS00600|SSF53383|TIGR01885 BKD09_RS36625 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012899 LTXXQ motif family protein GO:0042597 PF07813 BKD09_RS36635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013022 Xylose isomerase-like, TIM barrel domain G3DSA:3.20.20.150|PF01261|SSF51658 BKD09_RS36640 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009334|IPR013785 Aldolase-type TIM barrel|Protein of unknown function DUF993 GO:0003824 G3DSA:3.20.20.70|PF06187|SSF51569 BKD09_RS36645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000683|IPR016040 NAD(P)-binding domain|Oxidoreductase, N-terminal GO:0016491 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01408|SSF51735|SSF55347 BKD09_RS36650 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029065 Enolase C-terminal domain-like G3DSA:3.20.20.120|SSF51604 BKD09_RS36655 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS36660 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015168 SsuA/THI5-like G3DSA:3.40.190.10|PF09084|SSF53850 BKD09_RS36665 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS36670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PR00455|SSF46689|SSF48498 BKD09_RS36675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025870|IPR029068 Glyoxalase-like domain|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase G3DSA:3.10.180.10|PF13468|PF13669|SSF54593 BKD09_RS36680 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002139|IPR002173|IPR011611|IPR029056 Carbohydrate kinase PfkB|Carbohydrate/puine kinase, PfkB, conserved site|Ribokinase-like|Ribokinase/fructokinase GO:0004747|GO:0006014|GO:0016773 G3DSA:3.40.1190.20|PF00294|PR00990|PS00584|SSF53613 BKD09_RS36685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002139|IPR011611|IPR011877|IPR029056 Carbohydrate kinase PfkB|Ribokinase|Ribokinase-like|Ribokinase/fructokinase GO:0004747|GO:0006014 G3DSA:3.40.1190.20|MF_01987|PF00294|PR00990|SSF53613 BKD09_RS36690 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004099|IPR016156|IPR023753|IPR028202 FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain|Reductase, C-terminal GO:0016491|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF07992|PF14759|PR00368|PR00411|SSF51905|SSF55424 BKD09_RS36695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001753|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|SSF52096 BKD09_RS36700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013078|IPR029033 Histidine phosphatase superfamily|Histidine phosphatase superfamily, clade-1 G3DSA:3.40.50.1240|PF00300|SM00855|SSF53254 BKD09_RS36705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004681|IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein GO:0016021 PF06808|PIRSF006066|TIGR00786 BKD09_RS36710 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290 BKD09_RS36715 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004682|IPR018389 TRAP transporter solute receptor DctP/TeaA|TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 PF03480|TIGR00787 BKD09_RS36720 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000581|IPR015928|IPR020558 Aconitase/3-isopropylmalate dehydratase, swivel|Dihydroxy-acid/6-phosphogluconate dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 PF00920|PS00886|SSF143975|SSF52016 BKD09_RS36725 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|SM00345|SM00895|SSF46785|SSF48008 BKD09_RS36730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000640|IPR005517|IPR009022|IPR014721|IPR020568 Elongation factor G, III-V domain|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Translation elongation factor EFG, V domain|Translation elongation factor EFG/EF2, domain IV GO:0005525 G3DSA:3.30.230.10|G3DSA:3.30.70.240|G3DSA:3.30.70.870|PF00679|PF03764|PF14492|SM00838|SM00889|SSF54211|SSF54980 BKD09_RS36745 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007341 Transglycosylase-associated protein GO:0016021 PF04226 BKD09_RS36750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002931|IPR013589 Bacterial transglutaminase-like, N-terminal|Transglutaminase-like G3DSA:3.90.260.10|PF01841|PF08379|SM00460|SSF54001 BKD09_RS36755 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013099 Potassium channel domain G3DSA:1.10.287.70|PF07885|SSF81324 BKD09_RS36760 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|PF01370|SSF51735 BKD09_RS36765 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005511|IPR011042|IPR013658 SMP-30/Gluconolactonase/LRE-like region|Senescence marker protein-30 (SMP-30)|Six-bladed beta-propeller, TolB-like G3DSA:2.120.10.30|PF08450|PR01790|SSF63829 BKD09_RS36770 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015590|IPR016160|IPR016161|IPR016162|IPR016163 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|SSF53720 BKD09_RS36775 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004660|IPR005474|IPR005475|IPR009014|IPR029061 2-oxo-acid dehydrogenase E1 component homodimeric type|Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase, N-terminal|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0008152|GO:0016491|GO:0055114 G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF00456|PIRSF000156|SM00861|SSF52518|SSF52922 BKD09_RS36780 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000485|IPR011008|IPR011991|IPR019885|IPR019887|IPR019888 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Transcription regulator HTH, AsnC-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13412|PR00033|PS00519|SM00344|SSF46785|SSF54909 BKD09_RS36785 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016898|IPR022486|IPR022488|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Polyphosphate kinase 2|Polyphosphate kinase 2, PA0141|Polyphosphate kinase-2-related GO:0006793|GO:0008976 G3DSA:3.40.50.300|PF03976|PIRSF028756|SSF52540|TIGR03707 BKD09_RS36790 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011852 TRAP transporter solute receptor, TAXI family G3DSA:3.40.190.10|PF16868|SSF53850 BKD09_RS36795 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011032|IPR013149|IPR013154|IPR016040 Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|SSF50129|SSF51735 BKD09_RS36800 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 BKD09_RS36805 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR020471|IPR023210 Aldo/keto reductase|NADP-dependent oxidoreductase domain GO:0016491|GO:0055114 G3DSA:3.20.20.100|PF00248|PR00069|SSF51430 BKD09_RS36810 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011042|IPR013658 SMP-30/Gluconolactonase/LRE-like region|Six-bladed beta-propeller, TolB-like G3DSA:2.120.10.30|PF08450|SSF63829 BKD09_RS36815 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006656|IPR006657|IPR006963|IPR007419|IPR009010|IPR027467 Aspartate decarboxylase-like domain|BFD-like [2Fe-2S]-binding domain|Molybdopterin dinucleotide-binding domain|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, 4Fe-4S domain|Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0016491|GO:0030151|GO:0051539|GO:0055114 G3DSA:2.20.25.90|G3DSA:2.40.40.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|PF00384|PF01568|PF04324|PF04879|PS00551|SM00926|SSF50692|SSF53706 BKD09_RS36820 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF07992|PR00368|PR00411|SSF51905 BKD09_RS36825 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000971|IPR009050|IPR012292 Globin|Globin-like|Globin/Protoglobin GO:0019825|GO:0020037 G3DSA:1.10.490.10|PF00042|SSF46458 BKD09_RS36830 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS36835 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR005890|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Nitrate transport ATP-binding subunit C/D|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015112|GO:0015706|GO:0016020|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540|TIGR01184 BKD09_RS36840 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR005889 ABC transporter type 1, transmembrane domain MetI-like|Nitrate transport permease GO:0006810|GO:0015112|GO:0015706|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01183 BKD09_RS36845 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029070 Chitinase insertion domain G3DSA:3.40.190.10|PF13379|SSF53850|SSF54556 BKD09_RS36855 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000292|IPR023271 Aquaporin-like|Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 G3DSA:1.20.1080.10|PF01226 BKD09_RS36860 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000719|IPR001932|IPR008266|IPR011009 PPM-type phosphatase domain|Protein kinase domain|Protein kinase-like domain|Tyrosine-protein kinase, active site GO:0003824|GO:0004672|GO:0005524|GO:0006468 G3DSA:1.10.510.10|G3DSA:3.30.200.20|G3DSA:3.60.40.10|PF00069|PF13672|PS00109|SM00331|SM00332|SSF56112|SSF81606 BKD09_RS36875 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR001660|IPR011990|IPR013761|IPR015893|IPR027417|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|Nucleotide cyclase|P-loop containing nucleoside triphosphate hydrolase|Sterile alpha motif domain|Sterile alpha motif/pointed domain|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetratricopeptide-like helical domain GO:0003677|GO:0005515|GO:0009190|GO:0016849|GO:0035556 G3DSA:1.10.150.50|G3DSA:1.10.357.10|G3DSA:1.25.40.10|G3DSA:3.30.70.1230|G3DSA:3.40.50.300|PF00211|PF00536|PF13191|SM00044|SM00454|SSF47769|SSF48452|SSF52540|SSF55073 BKD09_RS36880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000627|IPR007535|IPR015889 Catechol dioxygenase, N-terminal|Intradiol ring-cleavage dioxygenase, C-terminal|Intradiol ring-cleavage dioxygenase, core GO:0003824|GO:0005506|GO:0006725|GO:0008199|GO:0009712|GO:0016702|GO:0018576|GO:0055114 G3DSA:2.60.130.10|PF00775|PF04444|SSF49482 BKD09_RS36885 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001466|IPR012338 Beta-lactamase-related|Beta-lactamase/transpeptidase-like G3DSA:3.40.710.10|PF00144|SSF56601 BKD09_RS36890 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 G3DSA:3.30.450.20|PF07536|SM00911 BKD09_RS36895 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013341|IPR013342|IPR029017|IPR029065 Enolase C-terminal domain-like|Enolase N-terminal domain-like|Mandelate racemase/muconate lactonizing enzyme, C-terminal|Mandelate racemase/muconate lactonizing enzyme, N-terminal domain G3DSA:3.20.20.120|G3DSA:3.30.390.10|PF02746|PF13378|SM00922|SSF51604|SSF54826 BKD09_RS36905 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000531|IPR010105|IPR010917|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, conserved site|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PS01156|SSF56935|TIGR01783 BKD09_RS36910 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR001867|IPR011006|IPR011991 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF52172 BKD09_RS36915 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF02518|PR00344|SM00387|SM00388|SSF47384|SSF55874 BKD09_RS36920 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 PF02683 BKD09_RS36930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 BKD09_RS36935 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413 BKD09_RS36945 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001753|IPR014748|IPR018376|IPR029045 ClpP/crotonase-like domain|Crontonase, C-terminal|Crotonase superfamily|Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 G3DSA:1.10.12.10|G3DSA:3.90.226.10|PF00378|PS00166|SSF52096 BKD09_RS36950 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007374|IPR009326|IPR015947 ASCH domain|PUA-like domain|Protein of unknown function DUF984 G3DSA:3.10.400.10|PF04266|PIRSF021320|SM01022|SSF88697 BKD09_RS36955 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019818|IPR024084 Isocitrate/isopropylmalate dehydrogenase, conserved site|Isopropylmalate dehydrogenase-like domain GO:0000287|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.718.10|PF00180|PS00470|SM01329|SSF53659 BKD09_RS36960 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002328|IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|Alcohol dehydrogenase, zinc-type, conserved site|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PS00059|SM00829|SSF50129|SSF51735 BKD09_RS36965 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540|TIGR01727 BKD09_RS36970 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540|TIGR01727 BKD09_RS36975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS36980 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS36985 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000914|IPR023765|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain|Solute-binding protein family 5, conserved site GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PS01040|SSF53850 BKD09_RS36990 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|SSF89796 BKD09_RS36995 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001296|IPR011835|IPR013534 Bacterial/plant glycogen synthase|Glycosyl transferase, family 1|Starch synthase, catalytic domain GO:0004373 G3DSA:3.40.50.2000|MF_00484|PF00534|PF08323|SSF53756|TIGR02095 BKD09_RS37000 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018713 Domain of unknown function DUF2236 PF09995 BKD09_RS37005 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002641|IPR016035|IPR021095 Acyl transferase/acyl hydrolase/lysophospholipase|Patatin/Phospholipase A2-related|Protein of unknown function DUF3734 GO:0006629|GO:0008152 G3DSA:3.40.1090.10|PF01734|PF12536|SSF52151 BKD09_RS37010 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004714 Cytochrome oxidase maturation protein cbb3-type PF03597|TIGR00847 BKD09_RS37015 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001757|IPR006121|IPR008250|IPR017969|IPR018303|IPR023214|IPR027256 HAD-like domain|Heavy metal-associated domain, HMA|Heavy-metal-associated, conserved site|P-type ATPase|P-type ATPase, A domain|P-type ATPase, phosphorylation site|P-type ATPase, subfamily IB GO:0000166|GO:0006812|GO:0016021|GO:0019829|GO:0030001|GO:0046872 G3DSA:2.70.150.10|G3DSA:3.30.70.100|G3DSA:3.40.50.1000|PF00122|PF00403|PF00702|PR00119|PR00120|PS00154|PS01047|SSF55008|SSF56784|SSF81653|SSF81665|TIGR01494|TIGR01511|TIGR01525 BKD09_RS37020 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008620|IPR018037 Nitrogen fixation protein FixH|Nitrogen fixation protein FixH, Proteobacterial PF05751|PIRSF011386 BKD09_RS37025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013783|IPR014116|IPR017896|IPR017900|IPR032879 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Cytochrome c oxidase cbb3 type, accessory protein FixG|FixG, C-terminal immunoglobulin-like domain|Immunoglobulin-like fold GO:0016021 G3DSA:1.10.1060.10|G3DSA:2.60.40.10|G3DSA:3.30.70.20|PF11614|PF12801|PF13746|PS00198|SSF54862|TIGR02745 BKD09_RS37030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004678|IPR008168|IPR009056|IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal|Cytochrome c oxidase cbb3-type, subunit III|Cytochrome c, class IC|Cytochrome c-like domain GO:0005506|GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|PF14715|PIRSF000006|PR00605|SSF46626|TIGR00782 BKD09_RS37035 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008621 Cbb3-type cytochrome oxidase component PF05545 BKD09_RS37040 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003468|IPR009056 Cytochrome c oxidase, monohaem subunit/FixO|Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF02433|SSF46626|TIGR00781 BKD09_RS37045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000883|IPR004677|IPR023615|IPR023616 Cytochrome c oxidase cbb3-type, subunit I|Cytochrome c oxidase subunit I|Cytochrome c oxidase, subunit I domain|Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0045278|GO:0055114 G3DSA:1.20.210.10|PF00115|PS00077|SSF81442|TIGR00780 BKD09_RS37050 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000644|IPR013785 Aldolase-type TIM barrel|CBS domain GO:0003824 G3DSA:3.20.20.70|PF00571|SM00116|SSF54631 BKD09_RS37055 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PR01438|SSF52402 BKD09_RS37060 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR001610|IPR003594|IPR003661|IPR004358|IPR013767 Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0006355|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF00989|PF02518|PR00344|SM00086|SM00091|SM00387|SM00388|SSF47384|SSF55785|SSF55874|TIGR00229 BKD09_RS37065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PS00622|SM00421|SM00448|SSF46894|SSF52172 BKD09_RS37070 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 BKD09_RS37075 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|PR00034|SM00100|SM00419|SSF46785|SSF51206 BKD09_RS37080 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS37085 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011033|IPR027275 PRC-barrel domain|PRC-barrel-like G3DSA:2.30.30.240|PF05239|SSF50346 BKD09_RS37090 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008928|IPR032790|IPR032856 Glycogen debranching enzyme, C-terminal|Putative glycogen debranching enzyme, N-terminal|Six-hairpin glycosidase-like GO:0003824 PF06202|PF14742|SSF48208 BKD09_RS37095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|SM00382|SSF52540|SSF90123 BKD09_RS37100 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|SSF53756 BKD09_RS37105 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279|IPR003033|IPR029228|IPR029229 Alkyl sulfatase dimerisation domain|Alkyl sulfatase, C-terminal|Metallo-beta-lactamase|SCP2 sterol-binding domain GO:0046983 G3DSA:3.30.1050.10|G3DSA:3.60.15.10|PF00753|PF14863|PF14864|SM00849|SSF55718|SSF56281 BKD09_RS37110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000160|IPR029787 GGDEF domain|Nucleotide cyclase G3DSA:3.30.70.270|PF00990|SM00267|SSF55073|TIGR00254 BKD09_RS37115 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004681|IPR007387|IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein|Tripartite ATP-independent periplasmic transporter, DctQ component GO:0016021 PF04290|PF06808|TIGR00786 BKD09_RS37120 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004682|IPR018389 TRAP transporter solute receptor DctP/TeaA|TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 PF03480|PIRSF006470|TIGR00787 BKD09_RS37125 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023149|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 G3DSA:1.10.150.290|G3DSA:3.40.50.150|PF13489|SSF53335 BKD09_RS37130 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00080|PR00081|SSF51735 BKD09_RS37135 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003807 Domain of unknown function DUF202 PF02656 BKD09_RS37140 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001607|IPR013083 Zinc finger, RING/FYVE/PHD-type|Zinc finger, UBP-type GO:0008270 G3DSA:3.30.40.10|PF02148|SSF57850 BKD09_RS37145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006680|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase GO:0016787 G3DSA:3.20.20.140|PF04909|SSF51556 BKD09_RS37155 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004798|IPR004837 Calcium/proton exchanger CAX|Sodium/calcium exchanger membrane region GO:0006816|GO:0015369|GO:0016021|GO:0055085 PF01699|TIGR00378 BKD09_RS37160 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019818|IPR024084 Isocitrate/isopropylmalate dehydrogenase, conserved site|Isopropylmalate dehydrogenase-like domain GO:0000287|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.718.10|PF00180|PS00470|SM01329|SSF53659 BKD09_RS37165 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS37170 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006158|IPR006638|IPR007197|IPR023404|IPR025274 Cobalamin (vitamin B12)-binding domain|Domain of unknown function DUF4070|Elongator protein 3/MiaB/NifB|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0031419|GO:0046872|GO:0051536 G3DSA:3.80.30.20|PF02310|PF04055|PF13282|SM00729|SSF102114 BKD09_RS37175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR026337 HEXXH motif domain TIGR04267 BKD09_RS37180 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|SSF53335 BKD09_RS37185 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007197|IPR013785 Aldolase-type TIM barrel|Radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|PF04055|PF13353|SSF102114 BKD09_RS37190 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006638|IPR007197|IPR023404|IPR023984 Elongator protein 3/MiaB/NifB|Radical SAM|Radical SAM, alpha/beta horseshoe|Ribosomal peptide maturation radical SAM protein 1 GO:0003824|GO:0051536 G3DSA:3.80.30.20|PF04055|SM00729|SSF102114|TIGR03975 BKD09_RS37195 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007197|IPR013785 Aldolase-type TIM barrel|Radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|PF04055|SSF102114 BKD09_RS37205 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001041|IPR002888|IPR006058|IPR012675 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|[2Fe-2S]-binding GO:0009055|GO:0016491|GO:0046872|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.150.120|G3DSA:3.10.20.30|PF00111|PF01799|PS00197|SSF47741|SSF54292 BKD09_RS37210 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000674|IPR008274|IPR012368|IPR019546 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding|Oxidoreductase molybdopterin-binding subunit, IorB-related|Twin-arginine translocation pathway, signal sequence, bacterial/archaeal GO:0016491|GO:0055114 G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF02738|PIRSF036389|SM01008|SSF56003|TIGR01409 BKD09_RS37215 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015323|IPR016156|IPR023753 FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Flavocytochrome c sulphide dehydrogenase, flavin-binding GO:0016491|GO:0050660|GO:0055114 G3DSA:3.50.50.60|G3DSA:3.90.760.10|PF07992|PF09242|SSF51905|SSF55424 BKD09_RS37220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009056|IPR030999 Cytochrome c-like domain|Sulfur oxidation c-type cytochrome SoxX GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF00034|SSF46626|TIGR04485 BKD09_RS37225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016568|IPR030997|IPR032711 Ig-like SoxY domain|SoxY-related AACIE arm protein|Sulphur oxidation, SoxY PF13501|PIRSF010312|TIGR04487 BKD09_RS37230 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013783|IPR014756|IPR014880|IPR030995 Immunoglobulin E-set|Immunoglobulin-like fold|Sulphur oxidation protein SoxZ|Thiosulfate oxidation carrier complex protein SoxZ G3DSA:2.60.40.10|PF08770|SSF81296|TIGR04490 BKD09_RS37235 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009056|IPR025710 Cytochrome c-like domain|SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 G3DSA:1.10.760.10|PIRSF038455|SSF46626|TIGR04484 BKD09_RS37240 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 G3DSA:3.40.190.10|PF01547|SSF53850 BKD09_RS37245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS37250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS37255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001375|IPR011659|IPR015943|IPR029058 Alpha/Beta hydrolase fold|Peptidase S9, prolyl oligopeptidase, catalytic domain|WD40-like Beta Propeller|WD40/YVTN repeat-like-containing domain GO:0005515|GO:0006508|GO:0008236 G3DSA:2.130.10.10|G3DSA:3.40.50.1820|PF00326|PF07676|SSF53474|SSF82171 BKD09_RS37265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|PF00857|SSF52499 BKD09_RS37270 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029069 HotDog domain G3DSA:3.10.129.10|SSF54637 BKD09_RS37275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002869|IPR011766|IPR019752|IPR029061 Pyruvate-flavodoxin oxidoreductase, central domain|Pyruvate/ketoisovalerate oxidoreductase, catalytic domain|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0016491|GO:0016903|GO:0030976|GO:0055114 G3DSA:3.40.50.970|G3DSA:3.40.920.10|PF01558|PF02775|SSF52518|SSF53323 BKD09_RS37280 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003953|IPR023753|IPR027477 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain|Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|G3DSA:3.90.700.10|PF00890|PR00411|SSF51905|SSF56425 BKD09_RS37285 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001478|IPR001940|IPR009003 PDZ domain|Peptidase S1, PA clan|Peptidase S1C GO:0004252|GO:0005515|GO:0006508 G3DSA:2.30.42.10|G3DSA:2.40.10.10|PF13180|PF13365|PR00834|SM00228|SSF50156|SSF50494 BKD09_RS37295 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000172|IPR007867|IPR023753 FAD/NAD(P)-binding domain|Glucose-methanol-choline oxidoreductase, C-terminal|Glucose-methanol-choline oxidoreductase, N-terminal GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.50.50.60|PF00732|PF05199|SSF51905|SSF54373 BKD09_RS37300 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004026|IPR016071 Ada DNA repair, metal-binding|Staphylococcal nuclease (SNase-like), OB-fold GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 G3DSA:2.40.50.90|G3DSA:3.40.10.10|PF00565|SSF50199|SSF57884 BKD09_RS37305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005171|IPR014210 Cytochrome C oxidase subunit IV, prokaryotes|Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 PF03626|TIGR02847 BKD09_RS37310 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000298|IPR013833 Cytochrome c oxidase subunit III domain|Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0015002|GO:0016020|GO:0022904 G3DSA:1.20.120.80|PF00510|SSF81452 BKD09_RS37315 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000883|IPR014207|IPR023615|IPR023616 Cytochrome c oxidase subunit I|Cytochrome c oxidase, subunit I domain|Cytochrome c oxidase, subunit I, copper-binding site|Cytochrome o ubiquinol oxidase, subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0016682|GO:0020037|GO:0055114 G3DSA:1.20.210.10|PF00115|PR01165|PS00077|SSF81442|TIGR02843 BKD09_RS37320 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006333|IPR008972|IPR011759 Cupredoxin|Cytochrome C oxidase subunit II, transmembrane domain|Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016021|GO:0016682|GO:0022900|GO:0055114 G3DSA:1.10.287.90|G3DSA:2.60.40.420|PIRSF000292|SSF49503|SSF81464 BKD09_RS37325 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SSF51735 BKD09_RS37330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003779|IPR029032 AhpD-like|Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 G3DSA:1.20.1290.10|PF02627|SSF69118 BKD09_RS37335 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00080|PR00081|SSF51735 BKD09_RS37340 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011041|IPR011042|IPR012938 Glucose/Sorbosone dehydrogenase|Six-bladed beta-propeller, TolB-like|Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824|GO:0005975|GO:0016901|GO:0048038 G3DSA:2.120.10.30|PF07995|SSF50952 BKD09_RS37345 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009056|IPR010389 Cytochrome c-like domain|Domain of unknown function DUF989 GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF06181|SSF46626 BKD09_RS37350 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025870|IPR029068 Glyoxalase-like domain|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase G3DSA:3.10.180.10|PF13468|SSF54593 BKD09_RS37360 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 BKD09_RS37380 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 PF04632 BKD09_RS37385 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:2.40.50.100|PF13437|PF13533|SSF111369 BKD09_RS37390 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS37405 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|SSF82693|SSF82714|SSF82866 BKD09_RS37410 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|SSF111369|TIGR01730 BKD09_RS37415 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS37420 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 BKD09_RS37425 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002933|IPR011650 Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|SSF53187|SSF55031 BKD09_RS37430 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|SSF53474 BKD09_RS37435 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013341|IPR013342|IPR018110|IPR029017|IPR029065 Enolase C-terminal domain-like|Enolase N-terminal domain-like|Mandelate racemase/muconate lactonizing enzyme, C-terminal|Mandelate racemase/muconate lactonizing enzyme, N-terminal domain|Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 G3DSA:3.20.20.120|G3DSA:3.30.390.10|PF02746|PF13378|PS00908|PS00909|SM00922|SSF51604|SSF54826 BKD09_RS37440 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002933|IPR011650|IPR017439 Amidohydrolase|Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PIRSF005962|SSF53187|SSF55031|TIGR01891 BKD09_RS37445 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PF00474 BKD09_RS37450 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011040 Sialidases G3DSA:2.120.10.10|PF13088|SSF50939 BKD09_RS37455 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00081|SSF51735 BKD09_RS37460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002220|IPR013785 Aldolase-type TIM barrel|DapA-like GO:0003824|GO:0008152|GO:0016829 G3DSA:3.20.20.70|PF00701|PIRSF001365|SM01130|SSF51569 BKD09_RS37465 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.40.190.10|PF13416|SSF53850 BKD09_RS37470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000843|IPR010982|IPR028082 LacI-type HTH domain|Lambda repressor-like, DNA-binding domain|Periplasmic binding protein-like I GO:0003677|GO:0006355 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|SM00354|SSF47413|SSF53822 BKD09_RS37475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|SSF89796 BKD09_RS37480 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018146|IPR029068 Glyoxalase I, conserved site|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase GO:0004462|GO:0046872 G3DSA:3.10.180.10|PS00934|SSF54593 BKD09_RS37490 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003594|IPR003661|IPR004358|IPR011006 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00512|PF02518|PR00344|SM00387|SM00388|SSF47384|SSF52172|SSF55874 BKD09_RS37495 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004852|IPR009056|IPR026259 Cytochrome c-like domain|Di-c-type haem protein, MauG/cytochrome c peroxidase|Di-haem cytochrome c peroxidase GO:0009055|GO:0016491|GO:0020037|GO:0055114 G3DSA:1.10.760.10|PF00034|PF03150|PIRSF000294|SSF46626 BKD09_RS37500 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009506 Protein of unknown function DUF1127 PF06568 BKD09_RS37505 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF46894|SSF52172 BKD09_RS37510 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|SSF46626 BKD09_RS37515 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0008152|GO:0016758 G3DSA:3.40.50.2000|PF00201|SSF53756 BKD09_RS37520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004812|IPR011701|IPR020846 Drug resistance transporter Bcr/CmlA subfamily|Major facilitator superfamily|Major facilitator superfamily domain GO:0005215|GO:0006810|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473|TIGR00710 BKD09_RS37525 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010297|IPR014586|IPR029058 Alpha/Beta hydrolase fold|Protein of unknown function DUF900, hydrolase-like|Uncharacterised conserved protein UCP033909 G3DSA:3.40.50.1820|PF05990|PIRSF033909|SSF53474 BKD09_RS37545 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|SM00100|SSF46785|SSF51206 BKD09_RS37560 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001844|IPR002423|IPR018370|IPR027409|IPR027413 Chaperonin Cpn60|Chaperonin Cpn60, conserved site|Chaperonin Cpn60/TCP-1 family|GroEL-like apical domain|GroEL-like equatorial domain GO:0005524|GO:0005737|GO:0006457|GO:0042026 G3DSA:1.10.560.10|G3DSA:3.50.7.10|MF_00600|PF00118|PR00298|PS00296|SSF48592|SSF52029|SSF54849|TIGR02348 BKD09_RS37565 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011032|IPR018369|IPR020818 Chaperonin GroES, conserved site|GroES chaperonin family|GroES-like GO:0005524|GO:0005737|GO:0006457 G3DSA:2.30.33.40|MF_00580|PF00166|PR00297|PS00681|SM00883|SSF50129 BKD09_RS37570 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009962 Protein of unknown function DUF1488 PF07369 BKD09_RS37580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006091|IPR009075|IPR009100|IPR013786|IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PF12806|SSF47203|SSF56645 BKD09_RS37585 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS37590 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001753|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|SSF52096 BKD09_RS37595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004843|IPR006146|IPR006179|IPR008334|IPR029052 5'-Nucleotidase, C-terminal|5'-Nucleotidase, conserved site|5'-Nucleotidase/apyrase|Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0000166|GO:0009166|GO:0016787|GO:0016788|GO:0046872 G3DSA:3.60.21.10|G3DSA:3.90.780.10|PF00149|PF02872|PR01607|PS00785|SSF55816|SSF56300 BKD09_RS37600 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000286|IPR023801 Histone deacetylase domain|Histone deacetylase superfamily G3DSA:3.40.800.20|PF00850|PR01270|SSF52768 BKD09_RS37605 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 G3DSA:1.10.287.1040|MF_00337|PD028235|PF02609|PIRSF006488|SSF116842|TIGR01280 BKD09_RS37610 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005474|IPR005475|IPR005477|IPR009014|IPR020826|IPR029061|IPR033248 Deoxyxylulose-5-phosphate synthase|Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase binding site|Transketolase, C-terminal domain|Transketolase, N-terminal|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0008152|GO:0008661|GO:0016114 G3DSA:3.40.50.920|G3DSA:3.40.50.970|MF_00315|PF02779|PF02780|PF13292|PS00801|PS00802|SM00861|SSF52518|SSF52922|TIGR00204 BKD09_RS37615 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 G3DSA:3.40.50.1810|PF05014|SSF52309 BKD09_RS37620 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002877|IPR002942|IPR004538|IPR029063 Haemolysin A /rRNA methyltransferase TlyA|RNA-binding S4 domain|Ribosomal RNA methyltransferase FtsJ domain|S-adenosyl-L-methionine-dependent methyltransferase GO:0003723|GO:0008168|GO:0032259 G3DSA:3.10.290.10|G3DSA:3.40.50.150|PF01479|PF01728|PIRSF005578|SM00363|SSF53335|SSF55174|TIGR00478 BKD09_RS37625 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010280|IPR012340|IPR029063|IPR030390 (Uracil-5)-methyltransferase family|Nucleic acid-binding, OB-fold|RNA methyltransferase TrmA, active site|S-adenosyl-L-methionine-dependent methyltransferase GO:0006396|GO:0008173 G3DSA:2.40.50.140|G3DSA:3.40.50.150|PF05958|PS01230|SSF53335 BKD09_RS37630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS37635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|SM00382|SSF52540 BKD09_RS37640 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.40.190.10|PF13379|SSF53850 BKD09_RS37645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|SSF89796 BKD09_RS37650 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000891|IPR013785 Aldolase-type TIM barrel|Pyruvate carboxyltransferase GO:0003824 G3DSA:3.20.20.70|PF00682|SSF51569 BKD09_RS37655 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|SM00345|SM00895|SSF46785|SSF48008 BKD09_RS37665 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011991|IPR025714|IPR029063 Methyltransferase domain|S-adenosyl-L-methionine-dependent methyltransferase|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|G3DSA:3.40.50.150|PF13847|SSF46785|SSF53335 BKD09_RS37670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|SSF54593 BKD09_RS37675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001753|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|SSF52096 BKD09_RS37685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002035|IPR010607 Protein of unknown function DUF1194|von Willebrand factor, type A G3DSA:3.40.50.410|PF06707|SSF53300 BKD09_RS37690 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005829|IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain|Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PS00216|SSF103473 BKD09_RS37695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003691 Putative fluoride ion transporter CrcB GO:0016021 MF_00454|PF02537|TIGR00494 BKD09_RS37700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003691 Putative fluoride ion transporter CrcB GO:0016021 MF_00454|PF02537|TIGR00494 BKD09_RS37705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003793|IPR011322|IPR015867 Domain of unknown function DUF190|Nitrogen regulatory PII-like, alpha/beta|Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal G3DSA:3.30.70.120|PF02641|SSF54913 BKD09_RS37710 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003769|IPR014719|IPR022935 ATP-dependent Clp protease adaptor protein ClpS|Adaptor protein ClpS, core|Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like GO:0030163 G3DSA:3.30.1390.10|MF_00302|PF02617|SSF54736 BKD09_RS37715 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|Nucleotide cyclase GO:0009190|GO:0016849|GO:0035556 G3DSA:3.30.70.1230|PF00211|SM00044|SSF55073 BKD09_RS37720 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000453|IPR020541 Chorismate synthase|Chorismate synthase, conserved site GO:0004107|GO:0009073 G3DSA:3.60.150.10|MF_00300|PF01264|PIRSF001456|PS00787|PS00788|PS00789|SSF103263|TIGR00033 BKD09_RS37725 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013078|IPR029033 Histidine phosphatase superfamily|Histidine phosphatase superfamily, clade-1 G3DSA:3.40.50.1240|PF00300|PIRSF000709|SM00855|SSF53254 BKD09_RS37730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR014358|IPR016040 Enoyl-[acyl-carrier-protein] reductase (NADH)|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR GO:0004318|GO:0006633|GO:0055114 G3DSA:3.40.50.720|PF13561|PIRSF000094|PR00081|SSF51735 BKD09_RS37735 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000838|IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, ECF, conserved site|RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PS01063|SSF88659|SSF88946|TIGR02937 BKD09_RS37745 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001623|IPR002939|IPR008971 Chaperone DnaJ, C-terminal|DnaJ domain|HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 G3DSA:1.10.287.110|G3DSA:2.60.260.20|PF00226|PF01556|PR00625|SM00271|SSF46565|SSF49493 BKD09_RS37750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032635 Surface antigen domain PF16998 BKD09_RS37755 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000659|IPR011576|IPR012349|IPR019576|IPR019740 FMN-binding split barrel|Pyridoxamine 5'-phosphate oxidase|Pyridoxamine 5'-phosphate oxidase, conserved site|Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain|Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0004733|GO:0008615|GO:0010181|GO:0016491|GO:0016638|GO:0055114 G3DSA:2.30.110.10|MF_01629|PF01243|PF10590|PIRSF000190|PS01064|SSF50475|TIGR00558 BKD09_RS37760 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SSF51735 BKD09_RS37765 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13649|SSF53335 BKD09_RS37775 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 G3DSA:1.20.58.340|PF01544|SSF143865|SSF144083 BKD09_RS37780 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005490 L,D-transpeptidase catalytic domain GO:0016740 G3DSA:2.40.440.10|PF03734|SSF141523 BKD09_RS37785 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009683 Extensin-like, C-terminal PF06904 BKD09_RS37790 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801 BKD09_RS37795 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010865 Protein of unknown function DUF1499 PF07386 BKD09_RS37800 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|SM00849|SSF56281 BKD09_RS37805 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006089|IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase, conserved site|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PS00072|PS00073|SSF47203|SSF56645 BKD09_RS37810 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000422|IPR017945|IPR032677 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB|DHBP synthase RibB-like alpha/beta domain|GTP cyclohydrolase II GO:0008686|GO:0009231 G3DSA:3.90.870.10|PF00925|PF00926|PIRSF001259|SSF142695|SSF55821|TIGR00506 BKD09_RS37815 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003148|IPR006153|IPR016040 Cation/H+ exchanger|NAD(P)-binding domain|Regulator of K+ conductance, N-terminal GO:0006812|GO:0006813|GO:0015299|GO:0016021|GO:0055085 G3DSA:3.40.50.720|PF00999|PF02254|SSF51735 BKD09_RS37820 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021471 Protein of unknown function DUF3124 PF11322 BKD09_RS37825 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|SSF53383 BKD09_RS37830 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF13560|SM00530|SSF47413 BKD09_RS37845 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018170|IPR020471|IPR023210 Aldo/keto reductase|Aldo/keto reductase, conserved site|NADP-dependent oxidoreductase domain GO:0016491|GO:0055114 G3DSA:3.20.20.100|PF00248|PIRSF000097|PR00069|PS00798|SSF51430 BKD09_RS37850 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018946|IPR019546|IPR029052|IPR032093 Alkaline phosphatase D-related|Metallo-dependent phosphatase-like|Phospholipase D, N-terminal|Twin-arginine translocation pathway, signal sequence, bacterial/archaeal G3DSA:3.60.21.10|PF09423|PF16655|SSF56300|TIGR01409 BKD09_RS37860 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004136|IPR013785 Aldolase-type TIM barrel|Nitronate monooxygenase GO:0003824|GO:0018580|GO:0055114 G3DSA:3.20.20.70|PF03060|SSF51412 BKD09_RS37865 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF00106|PR00081|SSF51735 BKD09_RS37870 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002577|IPR011991 Helix-turn-helix, HxlR type|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF01638|SSF46785 BKD09_RS37875 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011033|IPR027275 PRC-barrel domain|PRC-barrel-like G3DSA:2.30.30.240|PF05239|SSF50346 BKD09_RS37905 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025419 Domain of unknown function DUF4142 PF13628 BKD09_RS37910 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR003018|IPR003594|IPR003660|IPR003661|IPR004358|IPR011006|IPR029016 CheY-like superfamily|GAF domain|GAF domain-like|HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0004871|GO:0005515|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.40|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PF13185|PR00344|SM00065|SM00304|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55781|SSF55874|SSF58104 BKD09_RS37915 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR001610|IPR001789|IPR011006|IPR011102|IPR013655 CheY-like superfamily|PAC motif|PAS domain|PAS fold-3|Signal transduction histidine kinase, HWE region|Signal transduction response regulator, receiver domain GO:0000160|GO:0004673|GO:0005515 G3DSA:3.30.450.20|G3DSA:3.40.50.2300|PF00072|PF07536|PF08447|SM00086|SM00448|SM00911|SSF52172|SSF55785|TIGR00229 BKD09_RS37945 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021425 Protein of unknown function DUF3072 PF11272 BKD09_RS37955 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001478|IPR001940|IPR009003|IPR011782 PDZ domain|Peptidase S1, PA clan|Peptidase S1C|Peptidase S1C, Do GO:0004252|GO:0005515|GO:0006508 G3DSA:2.30.42.10|G3DSA:2.40.10.10|PF13180|PF13365|PR00834|SM00228|SSF50156|SSF50494|TIGR02037 BKD09_RS37960 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PR01438|SSF52402 BKD09_RS37970 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000056|IPR011060|IPR013785|IPR026019 Aldolase-type TIM barrel|Ribulose-phosphate 3-epimerase|Ribulose-phosphate 3-epimerase-like|Ribulose-phosphate binding barrel GO:0003824|GO:0004750|GO:0005975|GO:0006098|GO:0008152|GO:0016857 G3DSA:3.20.20.70|PF00834|PIRSF001461|PS01086|SSF51366|TIGR01163 BKD09_RS37975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000470|IPR000641|IPR003593|IPR003959|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|CbxX/CfqX|CbxX/CfqX, monofunctional|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF00004|PR00819|PR00820|SM00382|SSF52540|TIGR02880 BKD09_RS37980 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000894 Ribulose bisphosphate carboxylase small chain, domain G3DSA:3.30.190.10|PF00101|SM00961|SSF55239 BKD09_RS37985 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000685|IPR017443|IPR020878|IPR020888 Ribulose bisphosphate carboxylase, large chain, active site|Ribulose bisphosphate carboxylase, large subunit|Ribulose bisphosphate carboxylase, large subunit, C-terminal|Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0000287|GO:0015977|GO:0016984 G3DSA:3.20.20.110|G3DSA:3.30.70.150|MF_01338|PF00016|PF02788|PS00157|SSF51649|SSF54966 BKD09_RS37990 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000771|IPR006412|IPR013785 Aldolase-type TIM barrel|Fructose-bisphosphate aldolase, class II, Calvin cycle subtype|Ketose-bisphosphate aldolase, class-II GO:0003824|GO:0004332|GO:0005975|GO:0006096|GO:0008270|GO:0016832 G3DSA:3.20.20.70|PF01116|PIRSF001359|PS00602|PS00806|SSF51569|TIGR00167|TIGR01521 BKD09_RS37995 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005474|IPR005475|IPR005478|IPR009014|IPR020826|IPR029061|IPR033248 Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase binding site|Transketolase, C-terminal domain|Transketolase, N-terminal|Transketolase, bacterial-like|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0004802|GO:0008152 G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF00456|PF02779|PF02780|PS00801|PS00802|SM00861|SSF52518|SSF52922|TIGR00232 BKD09_RS38000 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006082|IPR006083|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Phosphoribulokinase|Phosphoribulokinase/uridine kinase GO:0005524|GO:0005975|GO:0008152|GO:0008974|GO:0016301 G3DSA:3.40.50.300|PF00485|PR00478|PS00567|SSF52540 BKD09_RS38005 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000146|IPR028343|IPR033391 Fructose-1,6-bisphosphatase|Fructose-1,6-bisphosphatase class 1|Fructose-1-6-bisphosphatase class I, N-terminal GO:0005975|GO:0006001|GO:0016791|GO:0042132 G3DSA:3.30.540.10|G3DSA:3.40.190.80|MF_01855|PF00316|PIRSF000904|PIRSF500210|PR00115|SSF56655 BKD09_RS38010 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS38015 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000531|IPR010105|IPR010917|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, conserved site|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PS01156|SSF56935|TIGR01783 BKD09_RS38030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS38035 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893|IPR023772 DNA-binding HTH domain, TetR-type|DNA-binding HTH domain, TetR-type, conserved site|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PS01081|SSF46689|SSF48498 BKD09_RS38045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027843|IPR032710 Domain of unknown function DUF4440|NTF2-like domain G3DSA:3.10.450.50|PF14534|SSF54427 BKD09_RS38065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000086|IPR015797 NUDIX hydrolase domain|NUDIX hydrolase domain-like GO:0016787 G3DSA:3.90.79.10|PF00293|SSF55811 BKD09_RS38080 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005145|IPR006070|IPR010923|IPR017945 DHBP synthase RibB-like alpha/beta domain|Putative GTP-binding controlling metal-binding domain|YrdC-like domain|tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 GO:0003725 G3DSA:3.90.870.10|PF01300|PF03481|PIRSF004930|SSF55821|TIGR00057 BKD09_RS38085 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004113|IPR006094|IPR016164|IPR016166|IPR016167|IPR016169|IPR016171 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|FAD-linked oxidase, C-terminal|FAD-linked oxidase-like, C-terminal|Vanillyl-alcohol oxidase, C-terminal subdomain 2 GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:1.10.45.10|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF01565|PF02913|SSF55103|SSF56176 BKD09_RS38090 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 BKD09_RS38095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004385|IPR015797 NUDIX hydrolase domain-like|Nucleoside diphosphate pyrophosphatase GO:0016787|GO:0016818|GO:0046872 G3DSA:3.90.79.10|SSF55811|TIGR00052 BKD09_RS38100 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family GO:0050485|GO:0055114 PF07355 BKD09_RS38105 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|SSF89796 BKD09_RS38110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003738 SOS response associated peptidase (SRAP) G3DSA:3.90.1680.10|PF02586|SSF143081 BKD09_RS38120 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000086|IPR015797|IPR020084|IPR020476 NUDIX hydrolase|NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site GO:0016787 G3DSA:3.90.79.10|PF00293|PR00502|PS00893|SSF55811 BKD09_RS38125 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012645 Conserved hypothetical protein CHP02301 PF09539|TIGR02301 BKD09_RS38135 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008972|IPR028096 Cupredoxin|EfeO-type cupredoxin-like domain G3DSA:2.60.40.420|PF13473|SSF49503 BKD09_RS38140 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012347|IPR025419 Domain of unknown function DUF4142|Ferritin-related G3DSA:1.20.1260.10|PF13628 BKD09_RS38145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000838|IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, ECF, conserved site|RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PS01063|SSF88659|SSF88946|TIGR02937 BKD09_RS38150 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001307|IPR001763 Rhodanese-like domain|Thiosulphate sulfurtransferase, conserved site GO:0004792 G3DSA:3.40.250.10|PF00581|PS00380|SM00450|SSF52821 BKD09_RS38155 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002195|IPR004722|IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Dihydroorotase|Dihydroorotase, conserved site|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0004151|GO:0006221|GO:0016787|GO:0016810|GO:0016812|GO:0046872 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|PS00483|SSF51338|SSF51556|TIGR00857 BKD09_RS38160 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006222|IPR013977|IPR017703 Glycine cleavage T-protein, C-terminal barrel domain|Glycine cleavage T-protein-like, N-terminal|YgfZ/GcvT conserved site G3DSA:3.30.70.1400|PF01571|PF08669|SSF103025|TIGR03317 BKD09_RS38165 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004597|IPR005019|IPR011257 DNA glycosylase|DNA-3-methyladenine glycosylase I|Methyladenine glycosylase GO:0003824|GO:0006281|GO:0006284|GO:0008725 G3DSA:1.10.340.30|PF03352|SSF48150|TIGR00624 BKD09_RS38170 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006674 HD domain G3DSA:1.10.3210.10|SSF109604 BKD09_RS38175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016130|IPR029021 Protein-tyrosine phosphatase, active site|Protein-tyrosine phosphatase-like GO:0004725|GO:0016311|GO:0016791 G3DSA:3.90.190.10|PS00383|SSF52799 BKD09_RS38180 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011213|IPR011991|IPR015797 NUDIX hydrolase domain-like|Nicotinic acid mononucleotide biosynthesis protein|Winged helix-turn-helix DNA-binding domain GO:0016787 G3DSA:1.10.10.10|G3DSA:3.90.79.10|PIRSF019423|SSF46785|SSF55811 BKD09_RS38185 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014600|IPR019286 Protein of unknown function DUF2339, transmembrane|Uncharacterised conserved protein UCP035905, membrane protein PF10101|PIRSF035905 BKD09_RS38190 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003660|IPR004089|IPR004090|IPR024478 4HB MCP domain|Chemotaxis methyl-accepting receptor|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PF12729|PR00260|SM00283|SM00304|SSF158472|SSF58104 BKD09_RS38195 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003660|IPR004089|IPR032255 HAMP domain|Helical bimodular sensor domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|SM00283|SM00304|SM01358|SSF58104 BKD09_RS38200 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000727|IPR003660|IPR004089|IPR004090|IPR024478 4HB MCP domain|Chemotaxis methyl-accepting receptor|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain|Target SNARE coiled-coil homology domain GO:0004871|GO:0005515|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PF12729|PR00260|SM00283|SM00397|SSF158472|SSF58104 BKD09_RS38205 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003660|IPR004089|IPR004090 Chemotaxis methyl-accepting receptor|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PR00260|SM00283|SM00304|SSF158472|SSF58104 BKD09_RS38220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011032|IPR013149|IPR013154|IPR014188|IPR016040|IPR020843 Acrylyl-CoA reductase AcuI|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|SM00829|SSF50129|SSF51735|TIGR02823 BKD09_RS38225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS38230 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003473|IPR023066 Quinolinate synthase A, type 2|Quinolinate synthetase A GO:0008987|GO:0009435|GO:0016765|GO:0051539 MF_00568|PF02445|SSF142754|TIGR00550 BKD09_RS38235 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003953|IPR005288|IPR015939|IPR023753|IPR027477 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain|Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal|L-aspartate oxidase|Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain GO:0005737|GO:0008734|GO:0009435|GO:0016491|GO:0055114 G3DSA:1.20.58.100|G3DSA:3.50.50.60|G3DSA:3.90.700.10|PF00890|PF02910|PR00368|SSF46977|SSF51905|SSF56425|TIGR00551 BKD09_RS38240 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002638|IPR004393|IPR013785|IPR022412|IPR027277 Aldolase-type TIM barrel|Nicotinate-nucleotide pyrophosphorylase|Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD|Quinolinate phosphoribosyl transferase, C-terminal|Quinolinate phosphoribosyl transferase, N-terminal GO:0003824|GO:0004514|GO:0009435|GO:0016763|GO:0019363 G3DSA:3.20.20.70|G3DSA:3.90.1170.20|PF01729|PF02749|PIRSF006250|SSF51690|SSF54675|TIGR00078 BKD09_RS38245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011105 Cell wall hydrolase, SleB GO:0016787 PF07486 BKD09_RS38250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000121|IPR002192|IPR008279|IPR010121|IPR013815|IPR013816|IPR015813|IPR018274|IPR023151 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|PEP-utilising enzyme, C-terminal|PEP-utilising enzyme, active site|PEP-utilising enzyme, conserved site|PEP-utilising enzyme, mobile domain|Pyruvate phosphate dikinase, PEP/pyruvate-binding|Pyruvate, phosphate dikinase|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0005524|GO:0006090|GO:0016301|GO:0016310|GO:0016772|GO:0050242 G3DSA:1.10.189.10|G3DSA:1.20.80.30|G3DSA:3.20.20.60|G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.50.30.10|PF00391|PF01326|PF02896|PIRSF000853|PS00370|PS00742|SSF51621|SSF52009|SSF56059|TIGR01828 BKD09_RS38255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009642 Protein of unknown function DUF1236 PF06823 BKD09_RS38260 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008909|IPR015944 DALR anticodon binding|Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004814|GO:0004820|GO:0005524|GO:0005737|GO:0006420|GO:0006426 MF_00255|PF02092|PF05746|PR01045|SSF109604|TIGR00211 BKD09_RS38265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 G3DSA:1.20.58.180|G3DSA:3.30.930.10|MF_00254|PF02091|PR01044|SSF55681|TIGR00388 BKD09_RS38275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002142|IPR029045 ClpP/crotonase-like domain|Peptidase S49 GO:0006508|GO:0008233 G3DSA:3.90.226.10|PF01343|SSF52096 BKD09_RS38280 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002052|IPR007848|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|Methyltransferase small domain|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0008168|GO:0032259 G3DSA:3.40.50.150|PF05175|PS00092|SSF53335 BKD09_RS38285 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007864|IPR011322|IPR018551 Domain of unknown function DUF2007|Nitrogen regulatory PII-like, alpha/beta|Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 G3DSA:3.30.70.790|PF09413|SSF54913 BKD09_RS38290 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000092|IPR008949 Isoprenoid synthase domain|Polyprenyl synthetase GO:0008299 G3DSA:1.10.600.10|PF00348|PS00444|PS00723|SSF48576 BKD09_RS38295 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002577|IPR011991 Helix-turn-helix, HxlR type|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF01638|SSF46785 BKD09_RS38300 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014030|IPR014031|IPR016039|IPR017568|IPR020841 3-oxoacyl-[acyl-carrier-protein] synthase 2|Beta-ketoacyl synthase, C-terminal|Beta-ketoacyl synthase, N-terminal|Polyketide synthase, beta-ketoacyl synthase domain|Thiolase-like GO:0003824|GO:0006633|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00109|PF02801|PIRSF000447|SM00825|SSF53901|TIGR03150 BKD09_RS38305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PF01810|PIRSF006324 BKD09_RS38320 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|PR00111|SSF53474 BKD09_RS38325 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS38330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004776 Membrane transport protein GO:0016021|GO:0055085 PF03547 BKD09_RS38335 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004424|IPR006204|IPR013750|IPR014721|IPR020568 4-diphosphocytidyl-2C-methyl-D-erythritol kinase|GHMP kinase N-terminal domain|GHMP kinase, C-terminal domain|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0005524|GO:0016114|GO:0050515 G3DSA:3.30.230.10|G3DSA:3.30.70.890|MF_00061|PF00288|PF08544|PIRSF010376|SSF54211|SSF55060|TIGR00154 BKD09_RS38340 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13176|PF13414|SM00028|SSF48452 BKD09_RS38345 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007859|IPR023753 ETF-QO/FixX|FAD/NAD(P)-binding domain GO:0016491|GO:0051536|GO:0055114 G3DSA:3.30.70.20|G3DSA:3.50.50.60|PF05187|PF13450|PR00420|SSF51905|SSF54373|SSF54862 BKD09_RS38350 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005122|IPR005273 Uracil-DNA glycosylase, family 4 domain|Uracil-DNA glycosylase-like G3DSA:3.40.470.10|PF03167|SM00986|SM00987|SSF52141|TIGR00758 BKD09_RS38355 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic PF13231 BKD09_RS38360 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012337|IPR022898|IPR024567 Ribonuclease H-like domain|Ribonuclease HII|Ribonuclease HII/HIII domain GO:0003676|GO:0004523 G3DSA:3.30.420.10|MF_00052_B|PF01351|SSF53098 BKD09_RS38365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|SSF54593 BKD09_RS38370 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006638|IPR007197|IPR013785 Aldolase-type TIM barrel|Elongator protein 3/MiaB/NifB|Radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|PF04055|SM00729|SSF102114 BKD09_RS38375 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005593|IPR018969|IPR018970|IPR019789|IPR019790|IPR023962|IPR029061 Probable phosphoketolase|Thiamin diphosphate-binding fold|Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase|Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal|Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal|Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site|Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site GO:0005975|GO:0016832 G3DSA:3.40.50.970|MF_01403|PF03894|PF09363|PF09364|PIRSF017245|PS60002|PS60003|SSF52518 BKD09_RS38380 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000890|IPR004372|IPR023865 Acetate/propionate kinase|Aliphatic acid kinase, short-chain|Aliphatic acid kinase, short-chain, conserved site GO:0005622|GO:0006082|GO:0008152|GO:0016301|GO:0016310|GO:0016774 G3DSA:3.30.420.40|MF_00020|PF00871|PIRSF000722|PR00471|PS01075|PS01076|SSF53067|TIGR00016 BKD09_RS38390 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003734 Domain of unknown function DUF155 PF02582 BKD09_RS38395 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029044 Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|SSF53448 BKD09_RS38400 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR000835|IPR011991|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain|MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355|GO:0008080 G3DSA:1.10.10.10|G3DSA:3.40.630.30|PF00583|PF12802|PR00598|SM00347|SSF46785|SSF55729 BKD09_RS38405 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001453|IPR008284|IPR012245|IPR013484 MoaB/Mog domain|Molybdenum cofactor biosynthesis protein B, proteobacteria|Molybdenum cofactor biosynthesis protein MoaB|Molybdenum cofactor biosynthesis, conserved site GO:0006777 G3DSA:3.40.980.10|PF00994|PIRSF006443|PS01078|SM00852|SSF53218|TIGR00177|TIGR02667 BKD09_RS38410 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007343 Uncharacterised protein family, zinc metallopeptidase putative PF04228 BKD09_RS38415 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001091|IPR002052|IPR002941|IPR029063 DNA methylase N-4/N-6|DNA methylase, N-6 adenine-specific, conserved site|Restriction/modification DNA-methylase|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0003677|GO:0006306|GO:0008168|GO:0008170|GO:0032259 G3DSA:3.40.50.150|PF01555|PR00508|PS00092|SSF53335 BKD09_RS38425 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF00106|PR00081|SSF51735 BKD09_RS38430 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 BKD09_RS38435 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004045|IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF02798|SSF47616|SSF52833 BKD09_RS38440 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003660|IPR004089|IPR004090|IPR032255 Chemotaxis methyl-accepting receptor|HAMP domain|Helical bimodular sensor domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PD968187|PF00015|PF00672|PR00260|SM00283|SM00304|SM01358|SSF58104 BKD09_RS38445 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003660|IPR004089|IPR004090|IPR032255 Chemotaxis methyl-accepting receptor|HAMP domain|Helical bimodular sensor domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PR00260|SM00283|SM00304|SM01358|SSF58104 BKD09_RS38450 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR001294|IPR001789|IPR003018|IPR009219|IPR011006|IPR011102|IPR013515|IPR013654|IPR029016 Bacteriophytochrome, CheY-like|CheY-like superfamily|GAF domain|GAF domain-like|PAS domain|PAS fold-2|Phytochrome|Phytochrome, central region|Signal transduction histidine kinase, HWE region|Signal transduction response regulator, receiver domain GO:0000160|GO:0004673|GO:0005515|GO:0006355|GO:0009584|GO:0018298 G3DSA:3.30.450.40|G3DSA:3.40.50.2300|PF00072|PF00360|PF01590|PF07536|PF08446|PIRSF036397|PR01033|SM00065|SM00448|SM00911|SSF52172|SSF55781|SSF55785 BKD09_RS38455 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016053|IPR016084 Haem oxygenase-like|Haem oxygenase-like, multi-helical GO:0004392|GO:0006788|GO:0055114 G3DSA:1.20.910.10|PF01126|SSF48613 BKD09_RS38460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009959|IPR032710 NTF2-like domain|Polyketide cyclase SnoaL-like domain G3DSA:3.10.450.50|PF12680|SSF54427 BKD09_RS38465 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS38470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004045|IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF02798|SSF47616|SSF52833 BKD09_RS38475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002938|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain GO:0016491|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF01494|PR00420|SSF51905|SSF54373 BKD09_RS38480 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002559|IPR008490 Transposase InsH, N-terminal|Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PF01609|PF05598 BKD09_RS38485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003736|IPR006683|IPR029069 HotDog domain|Phenylacetic acid degradation-related domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|SSF54637|TIGR00369 BKD09_RS38490 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000445|IPR003265|IPR003651|IPR004035|IPR004036|IPR005760|IPR011257|IPR015797|IPR023170|IPR029119 A/G-specific adenine glycosylase MutY|DNA glycosylase|Endonuclease III, iron-sulphur binding site|Endonuclease III-like, conserved site-2|Endonuclease III-like, iron-sulphur cluster loop motif|Helix-hairpin-helix motif|Helix-turn-helix, base-excision DNA repair, C-terminal|HhH-GPD domain|MutY, C-terminal|NUDIX hydrolase domain-like GO:0003677|GO:0003824|GO:0006281|GO:0006284|GO:0016787|GO:0019104|GO:0051539 G3DSA:1.10.1670.10|G3DSA:1.10.340.30|G3DSA:3.90.79.10|PF00633|PF00730|PF10576|PF14815|PS00764|PS01155|SM00478|SM00525|SSF48150|SSF55811|TIGR01084 BKD09_RS38495 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007922|IPR010593 Protein of unknown function DUF1159|Protein of unknown function DUF721/UPF0232 PF05258|PIRSF032064 BKD09_RS38500 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012336 Thioredoxin-like fold G3DSA:3.40.30.10|PF13462|SSF52833 BKD09_RS38505 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003395|IPR010935|IPR011890|IPR027417 P-loop containing nucleoside triphosphate hydrolase|RecF/RecN/SMC, N-terminal|SMCs flexible hinge|Structural maintenance of chromosomes protein, prokaryotic GO:0005515|GO:0005524|GO:0005694|GO:0007062|GO:0030261|GO:0051276 G3DSA:3.40.50.300|MF_01894|PF02463|SM00968|SSF52540|SSF75553|TIGR02168 BKD09_RS38510 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015324|IPR029063 Ribosomal protein Rsm22, bacterial-type|S-adenosyl-L-methionine-dependent methyltransferase GO:0006412|GO:0008168 G3DSA:3.40.50.150|PF09243|SSF53335 BKD09_RS38515 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007156|IPR023353 LemA|LemA-like domain G3DSA:1.20.1440.20|PF04011|SSF140478 BKD09_RS38520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001915|IPR022919 Peptidase M48|Peptidase M48, protease HtpX, putative GO:0004222|GO:0006508 G3DSA:3.30.2010.10|MF_00188|PF01435 BKD09_RS38525 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|SSF52540 BKD09_RS38530 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|SSF52540 BKD09_RS38535 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000305|IPR027299 GIY-YIG domain|GIY-YIG nuclease superfamily G3DSA:3.40.1440.10|SSF82771 BKD09_RS38540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000836|IPR005764|IPR029057 Adenine phosphoribosyl transferase|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0003999|GO:0005737|GO:0006168|GO:0009116 G3DSA:3.40.50.2020|MF_00004|PF00156|SSF53271|TIGR01090 BKD09_RS38545 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005801|IPR006221|IPR006805|IPR010112|IPR015890|IPR017926|IPR029062 ADC synthase|Anthranilate synthase|Anthranilate synthase component I, N-terminal|Anthranilate synthase/para-aminobenzoate synthase like domain|Chorismate-utilising enzyme, C-terminal|Class I glutamine amidotransferase-like|Glutamine amidotransferase GO:0000162|GO:0004049|GO:0008152|GO:0009058|GO:0016833 G3DSA:3.40.50.880|G3DSA:3.60.120.10|PF00117|PF00425|PF04715|PIRSF036934|PR00096|PR00097|SSF52317|SSF56322|TIGR00566|TIGR01815 BKD09_RS38550 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002925|IPR029058 Alpha/Beta hydrolase fold|Dienelactone hydrolase GO:0016787 G3DSA:3.40.50.1820|PF01738|SSF53474 BKD09_RS38555 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002326|IPR005797|IPR005798|IPR009056|IPR016174|IPR027387 Cytochrome b/b6, C-terminal|Cytochrome b/b6, N-terminal|Cytochrome b/b6-like domain|Cytochrome c-like domain|Cytochrome c1|Di-haem cytochrome, transmembrane GO:0009055|GO:0016020|GO:0016491|GO:0020037|GO:0022904 G3DSA:1.10.760.10|G3DSA:1.20.5.100|G3DSA:1.20.810.10|PF00032|PF00033|PF02167|PR00603|SSF46626|SSF81342|SSF81648 BKD09_RS38560 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005805|IPR006317|IPR017941|IPR019470|IPR019546 Rieske [2Fe-2S] iron-sulphur domain|Rieske iron-sulphur protein, C-terminal|Twin-arginine translocation pathway, signal sequence, bacterial/archaeal|Ubiquinol-cytochrome c reductase, iron-sulphur subunit|Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0016020|GO:0016491|GO:0051537|GO:0055114 G3DSA:1.20.5.510|G3DSA:2.102.10.10|PF00355|PF10399|PR00162|SSF50022|TIGR01409|TIGR01416 BKD09_RS38565 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001537|IPR016914|IPR029026|IPR029028 Alpha/beta knot methyltransferases|tRNA (cytidine/uridine-2'-O-)-methyltransferase|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0001510|GO:0003723|GO:0006396|GO:0008168|GO:0008173 G3DSA:3.40.1280.10|MF_01885|PF00588|PIRSF029256|SSF75217 BKD09_RS38570 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013785|IPR024924|IPR030977 7-carboxy-7-deazaguanine synthase, Cx14CxxC-type|7-carboxy-7-deazaguanine synthase-like|Aldolase-type TIM barrel GO:0003824|GO:0008616|GO:0046872 G3DSA:3.20.20.70|MF_00917|PF13394|PIRSF000370|SSF102114|TIGR04508 BKD09_RS38575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein G3DSA:3.30.479.10|PF01242|PIRSF006113|SSF55620 BKD09_RS38580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001260|IPR018375 Coproporphyrinogen III oxidase, aerobic|Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 G3DSA:3.40.1500.10|MF_00333|PF01218|PIRSF000166|PR00073|PS01021|SSF102886 BKD09_RS38585 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006439|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain GO:0008152|GO:0016787 G3DSA:3.40.50.1000|PF13419|PR00413|SSF56784|TIGR01549 BKD09_RS38590 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019226 Protein of unknown function DUF2158 PF09926 BKD09_RS38595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 BKD09_RS38600 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PR00455|SSF46689|SSF48498 BKD09_RS38605 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023631 Amidase signature domain G3DSA:3.90.1300.10|PF01425|SSF75304 BKD09_RS38610 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS38620 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011991|IPR013196|IPR026881 Helix-turn-helix, type 11|WYL domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF08279|PF13280|SSF46785 BKD09_RS38625 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011032|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF08240|PF13602|SM00829|SSF50129|SSF51735 BKD09_RS38630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009959|IPR032710 NTF2-like domain|Polyketide cyclase SnoaL-like domain G3DSA:3.10.450.50|PF12680|SSF54427 BKD09_RS38635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13489|SSF53335 BKD09_RS38640 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001479|IPR002372|IPR009056|IPR011047|IPR017512|IPR018391|IPR027295 Cytochrome c-like domain|PQQ-dependent dehydrogenase, methanol/ethanol family|Pyrrolo-quinoline quinone beta-propeller repeat|Pyrrolo-quinoline quinone repeat|Quinoprotein alcohol dehydrogenase-like domain|Quinoprotein alcohol dehydrogenase-like superfamily|Quinoprotein dehydrogenase, conserved site GO:0005509|GO:0009055|GO:0016020|GO:0016614|GO:0020037|GO:0030288|GO:0055114 G3DSA:1.10.760.10|G3DSA:2.140.10.10|PF01011|PF13360|PF13442|PS00364|SM00564|SSF46626|SSF50998|TIGR03075 BKD09_RS38645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925 BKD09_RS38650 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 G3DSA:1.10.3090.10|G3DSA:3.30.460.10|PF01743|SSF81301|SSF81891 BKD09_RS38660 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000086|IPR015797 NUDIX hydrolase domain|NUDIX hydrolase domain-like GO:0016787 G3DSA:3.90.79.10|PF00293|SSF55811 BKD09_RS38665 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010707|IPR023361 Protein of unknown function DUF1285|Protein of unknown function DUF1285, beta-roll domain G3DSA:2.30.270.10|G3DSA:3.10.540.10|PF06938|PIRSF029557 BKD09_RS38670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011703|IPR016366|IPR027417 ATPase chaperone, AAA-type, MoxR, predicted|ATPase, AAA-3|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:1.10.8.300|G3DSA:3.40.50.300|PF07726|PIRSF002849|SSF52540 BKD09_RS38675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002881 Domain of unknown function DUF58 PF01882 BKD09_RS38680 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011933|IPR024163|IPR025297|IPR029062 Aerotolerance regulator, N-terminal|Class I glutamine amidotransferase-like|Domain of unknown function DUF4159|Double transmembrane domain PF07584|PF13709|SSF52317|TIGR02226 BKD09_RS38685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029062 Class I glutamine amidotransferase-like G3DSA:3.40.50.880|SSF52317 BKD09_RS38690 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021333 Protein of unknown function DUF2946 PF11162 BKD09_RS38695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|SSF56935 BKD09_RS38700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 BKD09_RS38705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 BKD09_RS38715 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|SSF53448 BKD09_RS38720 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019277 Protein of unknown function DUF2304 PF10066 BKD09_RS38725 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|SSF54593 BKD09_RS38730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000086|IPR015797|IPR020084|IPR020476 NUDIX hydrolase|NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site GO:0016787 G3DSA:3.90.79.10|PF00293|PR00502|PS00893|SSF55811 BKD09_RS38735 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|SSF56300 BKD09_RS38750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006254|IPR015813 Isocitrate lyase|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0004451|GO:0019752 G3DSA:3.20.20.60|PF00463|SSF51621 BKD09_RS38755 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001387|IPR010359|IPR010982|IPR018653|IPR026281 Cro/C1-type helix-turn-helix domain|Domain of unknown function DUF2083,transcriptional regulator|HTH domain, IrrE-type|HTH-type transcriptional regulator RamB|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0006355|GO:0043565 G3DSA:1.10.260.40|PF01381|PF06114|PF09856|PIRSF019251|SM00530|SSF47413 BKD09_RS38760 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011008 Dimeric alpha-beta barrel SSF54909 BKD09_RS38765 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR024079 Metallopeptidase, catalytic domain GO:0008237 G3DSA:3.40.390.10|SSF55486 BKD09_RS38775 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13414|PF13432|SM00028|SSF48452 BKD09_RS38780 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001915|IPR022919 Peptidase M48|Peptidase M48, protease HtpX, putative GO:0004222|GO:0006508 G3DSA:3.30.2010.10|MF_00188|PF01435 BKD09_RS38785 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002477|IPR011970|IPR023346|IPR031304 Lysozyme-like domain|Lytic murein transglycosylase|Peptidoglycan binding-like|Transglycosylase SLT domain 2 G3DSA:1.10.101.10|G3DSA:1.10.530.10|PF01471|PF13406|SSF47090|SSF53955|TIGR02283 BKD09_RS38790 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018531|IPR027369 DinB/YfiT-like putative metal-dependent hydrolase|Domain of unknown function DUF1993 G3DSA:1.20.120.450|PF09351|SSF109854 BKD09_RS38795 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001155|IPR013785 Aldolase-type TIM barrel|NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0003824|GO:0010181|GO:0016491|GO:0055114 G3DSA:3.20.20.70|PF00724|SSF51395 BKD09_RS38800 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014597 ABC transporter, periplasmic substrate-binding protein GO:0005215 G3DSA:3.40.190.10|PF13416|PIRSF035859|SSF53850 BKD09_RS38805 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018678 Protein of unknown function DUF2160, transmembrane PF09928 BKD09_RS38810 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS38815 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS38820 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR008995|IPR027417 AAA+ ATPase domain|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|SM00382|SSF50331|SSF52540 BKD09_RS38825 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR008995|IPR012340|IPR013611|IPR027417 AAA+ ATPase domain|ABC transporter-like|Molybdate/tungstate binding, C-terminal|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0016887|GO:0043190 G3DSA:2.40.50.140|G3DSA:3.40.50.300|PF00005|PF08402|SM00382|SSF50331|SSF52540 BKD09_RS38830 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000447|IPR006076|IPR023753|IPR031656 Alpha-glycerophosphate oxidase, C-terminal|FAD dependent oxidoreductase|FAD-dependent glycerol-3-phosphate dehydrogenase|FAD/NAD(P)-binding domain GO:0004368|GO:0006072|GO:0009331|GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01266|PF16901|PR01001|PS00977|PS00978|SSF51905|SSF54373 BKD09_RS38835 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM G3DSA:3.40.1620.10|PF02604|SSF143120|TIGR01552 BKD09_RS38840 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002716|IPR022907|IPR029060 PIN domain|PIN domain-like|VapC family GO:0004540 G3DSA:3.40.50.1010|MF_00265|PF01850|SSF88723 BKD09_RS38845 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001034|IPR011991|IPR014036 DeoR C-terminal sensor domain|DeoR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.1360|PF00455|PF08220|PR00037|SM00420|SM01134|SSF100950|SSF46785 BKD09_RS38850 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006439|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain GO:0008152|GO:0016787 G3DSA:3.40.50.1000|PF13419|PR00413|SSF56784|TIGR01509 BKD09_RS38855 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027843|IPR032710 Domain of unknown function DUF4440|NTF2-like domain G3DSA:3.10.450.50|PF14534|SSF54427 BKD09_RS38860 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027843|IPR032710 Domain of unknown function DUF4440|NTF2-like domain G3DSA:3.10.450.50|PF14534|SSF54427 BKD09_RS38865 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371 BKD09_RS38870 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027843|IPR032710 Domain of unknown function DUF4440|NTF2-like domain G3DSA:3.10.450.50|PF14534|SSF54427 BKD09_RS38880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006683|IPR029069 HotDog domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|SSF54637 BKD09_RS38885 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001753|IPR006108|IPR006176|IPR008927|IPR013328|IPR016040|IPR029045 3-hydroxyacyl-CoA dehydrogenase, C-terminal|3-hydroxyacyl-CoA dehydrogenase, NAD binding|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|ClpP/crotonase-like domain|Crotonase superfamily|NAD(P)-binding domain GO:0003824|GO:0003857|GO:0006631|GO:0008152|GO:0016491|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|G3DSA:3.90.226.10|PF00378|PF00725|PF02737|SSF48179|SSF51735|SSF52096 BKD09_RS38890 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002155|IPR016039|IPR020613|IPR020616|IPR020617 Thiolase|Thiolase, C-terminal|Thiolase, N-terminal|Thiolase, conserved site|Thiolase-like GO:0003824|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00108|PF02803|PIRSF000429|PS00737|SSF53901|TIGR01930 BKD09_RS38895 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006091|IPR009075|IPR009100|IPR013786|IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0033539|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PF09317|SSF47203|SSF56645 BKD09_RS38900 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002563|IPR012349 FMN-binding split barrel|Flavin reductase like domain GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF01613|SM00903|SSF50475 BKD09_RS38905 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|SSF46689|SSF48498 BKD09_RS38910 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|SSF82693|SSF82714|SSF82866 BKD09_RS38915 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|SSF111369|TIGR01730 BKD09_RS38920 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021558 Protein of unknown function DUF3018 PF11455 BKD09_RS38925 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003477|IPR011067 Plasmid maintenance toxin/Cell growth inhibitor|mRNA interferase PemK-like protein GO:0003677 G3DSA:2.30.30.110|PF02452|SSF50118 BKD09_RS38930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS38935 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021257 Protein of unknown function DUF2809 PF10990 BKD09_RS38940 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009351 Protein of unknown function DUF1006 PF06224 BKD09_RS38950 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002477|IPR029030 Caspase-like domain|Peptidoglycan binding-like G3DSA:1.10.101.10|G3DSA:3.40.50.1460|PF00656|PF01471|SSF47090|SSF52129 BKD09_RS38955 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006664|IPR006665|IPR006690 OmpA-like domain|Outer membrane protein, OmpA-like, conserved site|Outer membrane protein, bacterial GO:0009279|GO:0016021 G3DSA:3.30.1330.60|PF00691|PR01021|PS01068|SSF103088 BKD09_RS38960 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032421 Protein O-mannosyl-transferase, C-terminal four TM domain PF13231|PF16192 BKD09_RS38965 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006860 FecR protein PF04773 BKD09_RS38970 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005546 Autotransporter beta-domain SSF103515 BKD09_RS38975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009725|IPR028973|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|PhnB-like|Predicted 3-demethylubiquinone-9 3-methyltransferase G3DSA:3.10.180.10|PF06983|PIRSF021700|SSF54593 BKD09_RS38980 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase G3DSA:3.10.180.10|SSF54593 BKD09_RS38985 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 BKD09_RS38990 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008462 CsbD-like G3DSA:1.10.1470.10|PF05532|SSF69047 BKD09_RS38995 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 G3DSA:3.10.50.40|PF00254|SSF54534 BKD09_RS39000 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000101|IPR029055 Gamma-glutamyltranspeptidase|Nucleophile aminohydrolases, N-terminal GO:0003840|GO:0006749 PF01019|PR01210|SSF56235|TIGR00066 BKD09_RS39005 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001763|IPR020936 Rhodanese-like domain|Uncharacterised protein family UPF0176 G3DSA:3.40.250.10|MF_00469|PF00581|SM00450|SSF52821 BKD09_RS39010 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007236 SlyX G3DSA:1.20.5.300|MF_00715|PF04102|SSF144266 BKD09_RS39015 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR000160|IPR001610|IPR013656|IPR029787|IPR033479 Double Cache domain 1|GGDEF domain|Nucleotide cyclase|PAC motif|PAS domain|PAS fold-4 G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00990|PF02743|PF08448|SM00086|SM00091|SM00267|SSF55073|SSF55785|TIGR00229|TIGR00254 BKD09_RS39025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000257|IPR006361 Uroporphyrinogen decarboxylase (URO-D)|Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 G3DSA:3.20.20.210|MF_00218|PF01208|PS00906|PS00907|SSF51726|TIGR01464 BKD09_RS39030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000860|IPR022417|IPR022418|IPR022419 Porphobilinogen deaminase|Porphobilinogen deaminase, C-terminal|Porphobilinogen deaminase, N-terminal|Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 G3DSA:3.30.160.40|G3DSA:3.40.190.10|PF01379|PF03900|PIRSF001438|PR00151|PS00533|SSF53850|SSF54782|TIGR00212 BKD09_RS39035 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000172|IPR007867|IPR012132|IPR023753 FAD/NAD(P)-binding domain|Glucose-methanol-choline oxidoreductase|Glucose-methanol-choline oxidoreductase, C-terminal|Glucose-methanol-choline oxidoreductase, N-terminal GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.50.50.60|PF00732|PF05199|PIRSF000137|PS00623|PS00624|SSF51905|SSF54373 BKD09_RS39040 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR015893|IPR023772 DNA-binding HTH domain, TetR-type|DNA-binding HTH domain, TetR-type, conserved site|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|PS01081|SSF46689 BKD09_RS39045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009959|IPR032710 NTF2-like domain|Polyketide cyclase SnoaL-like domain G3DSA:3.10.450.50|PF12680|SSF54427 BKD09_RS39050 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000160|IPR001633|IPR029787 EAL domain|GGDEF domain|Nucleotide cyclase G3DSA:3.20.20.450|G3DSA:3.30.70.270|PF00563|PF00990|SM00052|SM00267|SSF141868|SSF55073|TIGR00254 BKD09_RS39055 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032808 DoxX family PF07681 BKD09_RS39060 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000951|IPR001041|IPR001433|IPR006058|IPR008333|IPR012675|IPR017938 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Phthalate dioxygenase reductase|Riboflavin synthase-like beta-barrel GO:0009055|GO:0016491|GO:0051536|GO:0051537|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.10.20.30|G3DSA:3.40.50.80|PF00111|PF00175|PF00970|PR00409|PS00197|SSF52343|SSF54292|SSF63380 BKD09_RS39065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|SM00345|SM00895|SSF46785|SSF48008 BKD09_RS39070 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 G3DSA:2.102.10.10|PF00355|SSF50022|SSF55961 BKD09_RS39075 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005843|IPR005844|IPR005845|IPR005846|IPR005852|IPR016055|IPR016066 Alpha-D-phosphohexomutase, C-terminal|Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III|Alpha-D-phosphohexomutase, alpha/beta/alpha domain I|Alpha-D-phosphohexomutase, alpha/beta/alpha domain II|Alpha-D-phosphohexomutase, alpha/beta/alpha domain III|Alpha-D-phosphohexomutase, conserved site|Phosphoglucomutase, alpha-D-glucose specific GO:0000287|GO:0004614|GO:0005975|GO:0016868|GO:0071704 G3DSA:3.30.310.50|G3DSA:3.40.120.10|PF00408|PF02878|PF02879|PF02880|PS00710|SSF53738|SSF55957|TIGR01132 BKD09_RS39080 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000383|IPR029058 Alpha/Beta hydrolase fold|Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 G3DSA:3.40.50.1820|PF02129|SSF53474 BKD09_RS39085 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF46894|SSF52172 BKD09_RS39090 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002656 Acyltransferase 3 GO:0016747 PF01757 BKD09_RS39095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF12706|SM00849|SSF56281 BKD09_RS39100 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008183|IPR011013|IPR014718 Aldose 1-/Glucose-6-phosphate 1-epimerase|Galactose mutarotase-like domain|Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0016853|GO:0030246 G3DSA:2.70.98.10|PF01263|SSF74650 BKD09_RS39105 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001732|IPR008927|IPR014026|IPR014027|IPR016040|IPR017476|IPR028357 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|UDP-glucose 6-dehydrogenase, bacterial type|UDP-glucose/GDP-mannose dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase, C-terminal|UDP-glucose/GDP-mannose dehydrogenase, N-terminal|UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0000271|GO:0003979|GO:0016616|GO:0051287|GO:0055114 G3DSA:1.20.5.100|G3DSA:3.40.50.720|PF00984|PF03720|PF03721|PIRSF000124|PIRSF500134|SM00984|SSF48179|SSF51735|SSF52413|TIGR03026 BKD09_RS39110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001509|IPR016040|IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase|NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0009226|GO:0016491|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|MF_00956|PF01370|SSF51735 BKD09_RS39115 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006368|IPR016040 GDP-mannose 4,6-dehydratase|NAD(P)-binding domain GO:0008446|GO:0019673 G3DSA:3.40.50.720|G3DSA:3.90.25.10|MF_00955|PF16363|SSF51735|TIGR01472 BKD09_RS39120 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001509|IPR008089|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain|Nucleotide sugar epimerase GO:0003824|GO:0005975|GO:0016857|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|PR01713|SSF51735 BKD09_RS39125 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001296 Glycosyl transferase, family 1 G3DSA:3.40.50.2000|PF00534|SSF53756 BKD09_RS39130 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|SSF53756 BKD09_RS39135 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003715|IPR019554 Polysaccharide export protein|Soluble ligand binding domain GO:0015159|GO:0015774|GO:0016020 G3DSA:3.10.560.10|G3DSA:3.30.1950.10|PF02563|PF10531 BKD09_RS39140 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013781|IPR017853 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain GO:0005975 G3DSA:3.20.20.80|SSF51445 BKD09_RS39145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF13579|PF13692|SSF53756 BKD09_RS39150 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|SSF53756 BKD09_RS39160 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|SSF53756 BKD09_RS39165 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013781|IPR017853 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain GO:0005975 G3DSA:3.20.20.80|SSF51445 BKD09_RS39170 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13489|SSF53335 BKD09_RS39175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001451|IPR005881|IPR011004 Hexapeptide repeat|Serine O-acetyltransferase|Trimeric LpxA-like GO:0005737|GO:0006535|GO:0009001 G3DSA:2.160.10.10|PF00132|PIRSF000441|SSF51161 BKD09_RS39180 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic PF13440 BKD09_RS39185 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002656 Acyltransferase 3 GO:0016747 PF01757 BKD09_RS39195 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002656 Acyltransferase 3 GO:0016747 PF01757 BKD09_RS39200 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007016 O-antigen ligase-related PF04932 BKD09_RS39210 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010319 Transglutaminase-like cysteine peptidase, predicted PF06035 BKD09_RS39220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002586|IPR003856|IPR027417|IPR032807 CobQ/CobB/MinD/ParA nucleotide binding domain|Lipopolysaccharide biosynthesis|P-loop containing nucleoside triphosphate hydrolase|Tyrosine kinase, G-rich domain GO:0009103|GO:0016020 G3DSA:3.40.50.300|PF01656|PF02706|PF13807|SSF52540 BKD09_RS39230 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002656 Acyltransferase 3 GO:0016747 PF01757 BKD09_RS39235 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013781|IPR017853 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain GO:0005975 G3DSA:3.20.20.80|SSF51445 BKD09_RS39240 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003362|IPR017473|IPR017475 Bacterial sugar transferase|Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase|Undecaprenyl-phosphate glucose phosphotransferase, WcaJ PF02397|PF13727|TIGR03023|TIGR03025 BKD09_RS39250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|SSF56300 BKD09_RS39285 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006976|IPR017015 Uncharacterised conserved protein UCP033367, VanZ, Bll3170|VanZ-like PF04892|PIRSF033367 BKD09_RS39295 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032417 T3SS negative regulator GrlR PF16518 BKD09_RS39300 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:1.10.287.950|SSF58104 BKD09_RS39305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000673|IPR001789|IPR008248|IPR011006 CheY-like superfamily|Signal transduction response regulator, chemotaxis, CheB|Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase|Signal transduction response regulator, receiver domain GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 G3DSA:3.40.50.180|G3DSA:3.40.50.2300|MF_00099|PF00072|PF01339|PIRSF000876|SM00448|SSF52172|SSF52738 BKD09_RS39310 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000780|IPR022641|IPR022642|IPR026024|IPR029063 Chemotaxis protein methyltransferase CheR|Chemotaxis receptor methyltransferase CheR, N-terminal|MCP methyltransferase, CheR-type|MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal|S-adenosyl-L-methionine-dependent methyltransferase GO:0008757 G3DSA:1.10.155.10|G3DSA:3.40.50.150|PF01739|PF03705|PIRSF000410|PR00996|SM00138|SSF47757|SSF53335 BKD09_RS39315 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003660|IPR004089|IPR004090|IPR024478 4HB MCP domain|Chemotaxis methyl-accepting receptor|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PF12729|PR00260|SM00283|SM00304|SSF58104 BKD09_RS39320 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 G3DSA:2.40.50.180|PF01584|SM00260|SSF50341 BKD09_RS39325 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003660|IPR004089|IPR004090|IPR024478 4HB MCP domain|Chemotaxis methyl-accepting receptor|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PF12729|PR00260|SM00283|SM00304|SSF58104 BKD09_RS39330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 G3DSA:2.40.50.180|PF01584|SM00260|SSF50341 BKD09_RS39335 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002545|IPR003594|IPR003661|IPR004105|IPR004358|IPR008207 CheW-like domain|Histidine kinase CheA-like, homodimeric domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0000160|GO:0004673|GO:0004871|GO:0005737|GO:0006935|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.560|G3DSA:1.20.120.160|G3DSA:2.30.30.40|G3DSA:2.40.50.180|G3DSA:3.30.565.10|PF01584|PF01627|PF02518|PF02895|PR00344|SM00073|SM00260|SM00387|SM01231|SSF47226|SSF47384|SSF50341|SSF55874 BKD09_RS39340 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 BKD09_RS39345 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002645 STAS domain G3DSA:3.30.750.24|PF13466|SSF52091 BKD09_RS39350 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR003607|IPR006674|IPR011006 CheY-like superfamily|HD domain|HD/PDEase domain|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:1.10.3210.10|G3DSA:3.40.50.2300|PF00072|PF01966|SM00448|SM00471|SSF109604|SSF52172 BKD09_RS39360 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR007890|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|CHASE2|Nucleotide cyclase GO:0009190|GO:0016849|GO:0035556 G3DSA:3.30.70.1230|PF00211|PF05226|SM00044|SM01080|SSF55073 BKD09_RS39365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|PF01370|SSF51735 BKD09_RS39370 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002938|IPR012733|IPR023753 4-hydroxybenzoate 3-monooxygenase|FAD-binding domain|FAD/NAD(P)-binding domain GO:0016491|GO:0018659|GO:0043639|GO:0050660|GO:0055114|GO:0071949 G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01494|PR00420|SSF51905|SSF54373|TIGR02360 BKD09_RS39375 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003313|IPR009057|IPR014710|IPR018060 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|Homeodomain-like|RmlC-like jelly roll fold GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:2.60.120.10|PF02311|PF12833|SM00342|SSF46689|SSF51215 BKD09_RS39380 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021139|IPR029060 NYN domain, limkain-b1-type|PIN domain-like G3DSA:3.40.50.1010|PF01936 BKD09_RS39385 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000627|IPR012786|IPR015889 Intradiol ring-cleavage dioxygenase, C-terminal|Intradiol ring-cleavage dioxygenase, core|Protocatechuate 3,4-dioxygenase, alpha subunit GO:0003824|GO:0005506|GO:0006725|GO:0008199|GO:0016702|GO:0018578|GO:0019439|GO:0055114 G3DSA:2.60.130.10|PF00775|PS00083|SSF49482|TIGR02423 BKD09_RS39390 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000627|IPR012785|IPR015889|IPR024756 Intradiol ring-cleavage dioxygenase, C-terminal|Intradiol ring-cleavage dioxygenase, core|Protocatechuate 3,4-dioxygenase beta subunit, N-terminal|Protocatechuate 3,4-dioxygenase, beta subunit GO:0003824|GO:0005506|GO:0006725|GO:0008199|GO:0016702|GO:0018578|GO:0019619|GO:0055114 G3DSA:2.60.130.10|PF00775|PF12391|PS00083|SSF49482|TIGR02422 BKD09_RS39395 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS39400 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002638|IPR006406|IPR007229 Nicotinate phosphoribosyltransferase|Nicotinate phosphoribosyltransferase family|Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0004516|GO:0009435|GO:0019357 G3DSA:3.20.140.10|MF_00570|PF04095|PIRSF000484|SSF51690|SSF54675|TIGR01514 BKD09_RS39405 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000160|IPR029787 GGDEF domain|Nucleotide cyclase G3DSA:3.30.70.270|PF00990|SM00267|SSF55073|TIGR00254 BKD09_RS39410 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005546|IPR006315|IPR011050 Autotransporter beta-domain|Outer membrane autotransporter barrel|Pectin lyase fold/virulence factor GO:0019867 G3DSA:2.40.128.130|PF03797|SM00869|SSF103515|SSF51126|TIGR01414 BKD09_RS39415 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893|IPR025996 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal|WHG domain GO:0003677 G3DSA:1.10.357.10|PF00440|PF13305|SSF46689|SSF48498 BKD09_RS39425 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR002123|IPR011701|IPR020845|IPR020846|IPR022324 AMP-binding, conserved site|AMP-dependent synthetase/ligase|Bacilysin exporter BacE, putative|Major facilitator superfamily|Major facilitator superfamily domain|Phospholipid/glycerol acyltransferase GO:0003824|GO:0008152|GO:0016020|GO:0016021|GO:0016746|GO:0042891|GO:0055085 G3DSA:1.20.1250.20|G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF01553|PF07690|PR01988|PS00455|SM00563|SSF103473|SSF56801|SSF69593 BKD09_RS39430 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|SSF53474 BKD09_RS39435 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003752|IPR023380 Disulphide bond formation protein DsbB-like domain|Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 G3DSA:1.20.1550.10|PF02600|SSF158442 BKD09_RS39445 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012830|IPR023234 Citrate utilization protein B|NarG-like domain G3DSA:3.30.70.20|SSF103501|TIGR02484 BKD09_RS39450 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003953|IPR012831|IPR023753|IPR027477 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain|Precorrin 3B synthase CobZ|Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|G3DSA:3.90.700.10|PF00890|SSF51905|SSF56425|TIGR02485 BKD09_RS39455 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|SM00345|SM00895|SSF46785|SSF48008 BKD09_RS39460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004369|IPR007214 Prolyl-tRNA editing protein, YbaK/EbsC|YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 G3DSA:3.90.960.10|PF04073|PIRSF006181|SSF55826|TIGR00011 BKD09_RS39465 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001041|IPR006478|IPR006655|IPR006656|IPR006657|IPR006963|IPR009010|IPR009051|IPR012675|IPR017896|IPR017900 2Fe-2S ferredoxin-type iron-sulfur binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Alpha-helical ferredoxin|Aspartate decarboxylase-like domain|Beta-grasp domain|Formate dehydrogenase, alpha subunit|Molybdopterin dinucleotide-binding domain|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, 4Fe-4S domain|Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0008863|GO:0009055|GO:0015942|GO:0016491|GO:0030151|GO:0051536|GO:0055114 G3DSA:2.20.25.90|G3DSA:2.40.40.20|G3DSA:3.10.20.30|G3DSA:3.30.70.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|PF00384|PF01568|PF04879|PF12838|PF13510|PIRSF036643|PS00198|PS00490|SM00926|SSF46548|SSF50692|SSF53706|SSF54292|TIGR01591 BKD09_RS39470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001949|IPR011538|IPR012336|IPR019554|IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain|NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain|NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site|Soluble ligand binding domain|Thioredoxin-like fold GO:0008137|GO:0010181|GO:0051539|GO:0055114 PF01257|PF01512|PF10531|PF10589|PS00644|PS00645|SM00928|SSF140490|SSF142019|SSF142984|SSF52833 BKD09_RS39480 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS39485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001455 TusA-like domain G3DSA:3.30.110.40|PF01206|PS01148|SSF64307 BKD09_RS39490 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001453|IPR005110|IPR005111 MoaB/Mog domain|MoeA, C-terminal, domain IV|MoeA, N-terminal and linker domain GO:0032324 G3DSA:2.170.190.11|G3DSA:2.40.340.10|G3DSA:3.40.980.10|G3DSA:3.90.105.10|PF00994|PF03453|PF03454|SM00852|SSF53218|SSF63867|SSF63882|TIGR00177 BKD09_RS39495 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004435|IPR027417 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain|P-loop containing nucleoside triphosphate hydrolase GO:0005525|GO:0006777 G3DSA:3.40.50.300|PF03205|SSF52540|TIGR00176 BKD09_RS39500 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003786|IPR016193 Cytidine deaminase-like|Protein FdhD GO:0003824|GO:0016783 G3DSA:3.10.20.10|G3DSA:3.40.140.10|MF_00187|PF02634|PIRSF015626|SSF53927|TIGR00129 BKD09_RS39505 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013482|IPR025877|IPR029044 MobA-like NTP transferase|Molybdenum cofactor guanylyltransferase|Nucleotide-diphospho-sugar transferases GO:0003824|GO:0006777 G3DSA:3.90.550.10|MF_00316|PF12804|SSF53448|TIGR02665 BKD09_RS39510 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002938|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain GO:0016491|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF01494|PR00420|SSF51905|SSF54373 BKD09_RS39515 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001453|IPR005110|IPR005111|IPR008284|IPR024370 MoaB/Mog domain|MoeA, C-terminal, domain IV|MoeA, N-terminal and linker domain|Molybdenum cofactor biosynthesis, conserved site|PBP domain GO:0006777|GO:0032324 G3DSA:2.170.190.11|G3DSA:2.40.340.10|G3DSA:3.40.980.10|G3DSA:3.90.105.10|PF00994|PF03453|PF03454|PF12727|PS01079|SM00852|SSF53218|SSF53850|SSF63867|SSF63882|TIGR00177 BKD09_RS39520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001453|IPR005110|IPR005111 MoaB/Mog domain|MoeA, C-terminal, domain IV|MoeA, N-terminal and linker domain GO:0032324 G3DSA:2.170.190.11|G3DSA:2.40.340.10|G3DSA:3.40.980.10|PF00994|PF03453|PF03454|SM00852|SSF53218|SSF63867|SSF63882 BKD09_RS39525 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR024370 PBP domain G3DSA:3.40.190.10|PF12849|SSF53850 BKD09_RS39530 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009061|IPR010093|IPR024370 PBP domain|Putative DNA-binding domain|SinI-like, DNA-binding domain GO:0003677 G3DSA:3.40.190.10|PF12727|PF12728|SSF46955|SSF53850|TIGR01764 BKD09_RS39535 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS39540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002559|IPR008490 Transposase InsH, N-terminal|Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PF01609|PF05598 BKD09_RS39545 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011852 TRAP transporter solute receptor, TAXI family G3DSA:3.40.190.10|PF16868|SSF53850|TIGR02122 BKD09_RS39550 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 BKD09_RS39560 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009959|IPR032710 NTF2-like domain|Polyketide cyclase SnoaL-like domain G3DSA:3.10.450.50|PF07366|SSF54427 BKD09_RS39565 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR018060 DNA binding HTH domain, AraC-type|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|SM00342 BKD09_RS39570 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR001660|IPR011990|IPR013761|IPR027417|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|Nucleotide cyclase|P-loop containing nucleoside triphosphate hydrolase|Sterile alpha motif domain|Sterile alpha motif/pointed domain|Tetratricopeptide-like helical domain GO:0005515|GO:0009190|GO:0016849|GO:0035556 G3DSA:1.10.150.50|G3DSA:1.25.40.10|G3DSA:3.30.70.1230|G3DSA:3.40.50.300|PF00211|PF00536|PF13191|SM00044|SM00454|SSF47769|SSF48452|SSF52540|SSF55073 BKD09_RS39580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase G3DSA:3.10.180.10|PF13669|SSF54593 BKD09_RS39585 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000092|IPR002937|IPR008949|IPR023753 Amine oxidase|FAD/NAD(P)-binding domain|Isoprenoid synthase domain|Polyprenyl synthetase GO:0008299|GO:0016491|GO:0055114 G3DSA:1.10.600.10|G3DSA:3.50.50.60|PF00348|PF01593|PF13450|PS00444|PS00723|SSF48576|SSF51905 BKD09_RS39595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007544 Encapsulating protein for peroxidase GO:0008233|GO:0042742 PF04454 BKD09_RS39600 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011250|IPR020915 Outer membrane protein/outer membrane enzyme PagP, beta-barrel|Uncharacterised protein family UPF0311 GO:0016021 G3DSA:2.40.160.20|PF11578 BKD09_RS39615 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002035|IPR010607 Protein of unknown function DUF1194|von Willebrand factor, type A PF06707|SSF53300 BKD09_RS39620 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000866|IPR012336 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF00578|SSF52833 BKD09_RS39625 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005097|IPR016040 NAD(P)-binding domain|Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 G3DSA:3.40.50.720|PF03435|SSF51735 BKD09_RS39630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001478|IPR005151|IPR028204|IPR029045 ClpP/crotonase-like domain|PDZ domain|Tail specific protease|Tricorn protease C1 domain GO:0005515|GO:0006508|GO:0008236 G3DSA:2.30.42.10|G3DSA:3.30.750.44|G3DSA:3.90.226.10|PF03572|PF14684|SM00245|SSF50156|SSF52096 BKD09_RS39665 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|SSF53335 BKD09_RS39670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS39675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS39680 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015168 SsuA/THI5-like G3DSA:3.40.190.10|PF09084|SSF53850 BKD09_RS39685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011008 Dimeric alpha-beta barrel SSF54909 BKD09_RS39690 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027843|IPR032710 Domain of unknown function DUF4440|NTF2-like domain G3DSA:3.10.450.50|PF14534|SSF54427 BKD09_RS39695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002803 Fructose-1,6-bisphosphatase, class V PD014260|PF01950|PIRSF015647|SSF111249 BKD09_RS39700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000023|IPR022953 ATP-dependent 6-phosphofructokinase|Phosphofructokinase domain GO:0003872|GO:0006002|GO:0006096 G3DSA:3.40.50.450|PF00365|PR00476|SSF53784 BKD09_RS39705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000682|IPR029063 Protein-L-isoaspartate(D-aspartate) O-methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase GO:0004719|GO:0006464 G3DSA:3.40.50.150|MF_00090|PF01135|PS01279|SSF53335|TIGR00080 BKD09_RS39710 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002059|IPR011129|IPR012156|IPR012340|IPR019844 Cold shock protein|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|SM00357|SSF50249 BKD09_RS39720 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005372 Uncharacterised protein family UPF0182 GO:0016021 MF_01600|PF03699 BKD09_RS39725 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006471|IPR011577|IPR016174 Cytochrome b561, bacterial/Ni-hydrogenase|Di-haem cytochrome, transmembrane|Formate dehydrogenase, gamma subunit GO:0008863|GO:0009055|GO:0009326|GO:0016020|GO:0016021|GO:0022904|GO:0045333 G3DSA:1.20.950.20|PF01292|SSF81342|TIGR01583 BKD09_RS39730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain G3DSA:3.30.70.20|PF13247|PS00198|SSF54862 BKD09_RS39735 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006656|IPR006657|IPR006963|IPR009010|IPR027467 Aspartate decarboxylase-like domain|Molybdopterin dinucleotide-binding domain|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, 4Fe-4S domain|Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0016491|GO:0030151|GO:0051539|GO:0055114 G3DSA:2.20.25.90|G3DSA:2.40.40.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|PF00384|PF01568|PF04879|PS00551|SM00926|SSF50692|SSF53706 BKD09_RS39740 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014177|IPR019546 Putative formate dehydrogenase, TAT signal-containing|Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PIRSF036704|TIGR01409|TIGR02811 BKD09_RS39745 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010982|IPR020945|IPR031856 DMSO/Nitrate reductase chaperone|Lambda repressor-like, DNA-binding domain|Putative bacterial antitoxin YdaS GO:0003677 G3DSA:1.10.260.40|G3DSA:1.10.3480.10|PF02613|PF15943|SSF47413|SSF89155 BKD09_RS39750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021735 Protein of unknown function DUF3306 PF11748 BKD09_RS39755 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021736 Protein of unknown function DUF3305 PF11749 BKD09_RS39770 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 G3DSA:3.30.930.10|PF16917|SSF55681 BKD09_RS39775 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain G3DSA:1.10.1060.10|G3DSA:3.30.70.20|PF00037|PF12838|PS00198|SSF54862 BKD09_RS39780 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001680|IPR002327|IPR009056|IPR011042|IPR015943|IPR017986 Cytochrome c, class IA/ IB|Cytochrome c-like domain|Six-bladed beta-propeller, TolB-like|WD40 repeat|WD40-repeat-containing domain|WD40/YVTN repeat-like-containing domain GO:0005515|GO:0009055|GO:0020037 G3DSA:1.10.760.10|G3DSA:2.120.10.30|G3DSA:2.130.10.10|PF00034|PF00400|PR00604|SM00320|SSF46626|SSF50978 BKD09_RS39790 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029044 Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF13704|SSF53448 BKD09_RS39795 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001048|IPR001341|IPR005260 Aspartate kinase domain|Aspartate kinase, monofunctional class|Aspartate/glutamate/uridylate kinase GO:0004072|GO:0008652|GO:0009089 G3DSA:3.40.1160.10|PF00696|PIRSF000726|SSF53633|TIGR00657 BKD09_RS39800 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016040 NAD(P)-binding domain G3DSA:3.40.50.720|PF13460|SSF51735 BKD09_RS39815 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011059|IPR013108|IPR032466 Amidohydrolase 3|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF07969|SSF51338|SSF51556 BKD09_RS39820 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007487|IPR028082 ABC transporter, substrate-binding protein|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF04392|SSF53822 BKD09_RS39825 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001753|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|SSF52096 BKD09_RS39830 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019285 Protein of unknown function DUF2336 PF10098 BKD09_RS39835 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925 BKD09_RS39845 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001867|IPR011990|IPR011991|IPR016032|IPR027417 OmpR/PhoB-type DNA-binding domain|P-loop containing nucleoside triphosphate hydrolase|Signal transduction response regulator, C-terminal effector|Tetratricopeptide-like helical domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0005515|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.25.40.10|G3DSA:3.40.50.300|PF00486|PF13191|SM00862|SSF46894|SSF48452|SSF52540 BKD09_RS39855 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PR01438|SSF52402 BKD09_RS39860 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012545 Protein of unknown function DUF1697 G3DSA:3.30.70.1280|PF08002|PIRSF008502|SSF160379 BKD09_RS39870 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021937 Protein of unknown function DUF3551 PF12071 BKD09_RS39875 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021295 Protein of unknown function DUF2867 PF11066 BKD09_RS39880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284|IPR032710 NTF2-like domain|RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|G3DSA:3.10.450.50|PF04542|PF08281|SSF54427|SSF88659|SSF88946|TIGR02937 BKD09_RS39890 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004638|IPR011701|IPR020846 Drug resistance transporter EmrB/QacA subfamily|Major facilitator superfamily|Major facilitator superfamily domain GO:0006810|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PR01036|SSF103473|TIGR00711 BKD09_RS39895 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00080|PR00081|SM00822|SSF51735 BKD09_RS39900 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032808 DoxX family PF07681 BKD09_RS39905 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PR00455|SSF46689|SSF48498 BKD09_RS39910 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013022 Xylose isomerase-like, TIM barrel domain G3DSA:3.20.20.150|PF01261|SSF51658 BKD09_RS39915 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000683|IPR004104|IPR016040 NAD(P)-binding domain|Oxidoreductase, C-terminal|Oxidoreductase, N-terminal GO:0008152|GO:0016491|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01408|PF02894|SSF51735|SSF55347 BKD09_RS39920 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 BKD09_RS39930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|Nucleotide cyclase GO:0009190|GO:0016849|GO:0035556 G3DSA:3.30.70.1230|PF00211|SSF55073 BKD09_RS39950 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|Nucleotide cyclase GO:0009190|GO:0016849|GO:0035556 G3DSA:3.30.70.1230|PF00211|SM00044|SSF55073 BKD09_RS39955 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010282|IPR011051|IPR014710 RmlC-like cupin domain|RmlC-like jelly roll fold|Uncharacterised protein family HutD/Ves G3DSA:2.60.120.10|PF05962|SSF51182 BKD09_RS39975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00081|SSF51735 BKD09_RS39980 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003779|IPR029032 AhpD-like|Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 G3DSA:1.20.1290.10|PF02627|SSF69118 BKD09_RS39985 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PR00455|SSF46689 BKD09_RS39990 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS39995 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|SM00849|SSF56281 BKD09_RS40000 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 BKD09_RS40005 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase G3DSA:3.10.180.10|PF13669|SSF54593 BKD09_RS40010 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|SSF53335 BKD09_RS40015 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002818|IPR009057|IPR018060|IPR029062 Class I glutamine amidotransferase-like|DJ-1/PfpI|DNA binding HTH domain, AraC-type|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:3.40.50.880|PF01965|PF12833|SM00342|SSF52317 BKD09_RS40020 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011008 Dimeric alpha-beta barrel SSF54909 BKD09_RS40030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005490 L,D-transpeptidase catalytic domain GO:0016740 G3DSA:2.40.440.10|PF03734|SSF141523 BKD09_RS40040 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|SSF89796 BKD09_RS40045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS40050 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|SM00382|SSF52540 BKD09_RS40055 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|SM00382|SSF52540 BKD09_RS40060 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS40065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS40070 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS40075 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013341|IPR013342|IPR018110|IPR029017|IPR029065 Enolase C-terminal domain-like|Enolase N-terminal domain-like|Mandelate racemase/muconate lactonizing enzyme, C-terminal|Mandelate racemase/muconate lactonizing enzyme, N-terminal domain|Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 G3DSA:3.20.20.120|G3DSA:3.30.390.10|PF02746|PF13378|PS00908|PS00909|SM00922|SSF51604|SSF54826 BKD09_RS40080 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002915|IPR013785 Aldolase-type TIM barrel|DeoC/FbaB/ lacD aldolase GO:0003824|GO:0016829 G3DSA:3.20.20.70|PF01791|SM01133|SSF51569 BKD09_RS40085 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002173|IPR011611|IPR029056 Carbohydrate kinase PfkB|Carbohydrate/puine kinase, PfkB, conserved site|Ribokinase-like GO:0016773 G3DSA:3.40.1190.20|PF00294|PS00584|SSF53613 BKD09_RS40090 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR008995|IPR012340|IPR013611|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0016887|GO:0043190 G3DSA:2.40.50.100|G3DSA:2.40.50.140|G3DSA:3.40.50.300|PF00005|PF08402|PS00211|SM00382|SSF50331|SSF52540 BKD09_RS40095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011032|IPR013154|IPR016040 Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF08240|SSF50129|SSF51735 BKD09_RS40100 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS40105 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS40110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 G3DSA:3.40.190.10|PF01547|SSF53850 BKD09_RS40115 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000843|IPR010982|IPR028082 LacI-type HTH domain|Lambda repressor-like, DNA-binding domain|Periplasmic binding protein-like I GO:0003677|GO:0006355 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|SM00354|SSF47413|SSF53822 BKD09_RS40120 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SSF51735 BKD09_RS40125 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029303 Polysaccharide biosynthesis protein, C-terminal domain PF13440|PF14667 BKD09_RS40130 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001000|IPR013781|IPR017853 Glycoside hydrolase family 10 domain|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain GO:0004553|GO:0005975 G3DSA:3.20.20.80|PF00331|PR00134|SM00633|SSF51445 BKD09_RS40140 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF01135|SSF53335 BKD09_RS40145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR001660|IPR011990|IPR013761|IPR027417|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|Nucleotide cyclase|P-loop containing nucleoside triphosphate hydrolase|Sterile alpha motif domain|Sterile alpha motif/pointed domain|Tetratricopeptide-like helical domain GO:0005515|GO:0009190|GO:0016849|GO:0035556 G3DSA:1.10.150.50|G3DSA:1.25.40.10|G3DSA:3.30.70.1230|G3DSA:3.40.50.300|PF00211|PF00536|PF13191|SM00044|SM00454|SSF47769|SSF48452|SSF52540|SSF55073 BKD09_RS40150 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR001242|IPR006162|IPR009081|IPR010071|IPR020806|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase|Amino acid adenylation domain|Condensation domain|Phosphopantetheine attachment site|Phosphopantetheine binding ACP domain|Polyketide synthase, phosphopantetheine-binding domain GO:0003824|GO:0008152|GO:0031177 G3DSA:1.10.1200.10|G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF00550|PF00668|PF13193|PF13745|PS00012|PS00455|SM00823|SSF47336|SSF52777|SSF56801|TIGR01733 BKD09_RS40155 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 G3DSA:3.90.470.20|PF01648|SSF56214 BKD09_RS40160 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011251 Luciferase-like domain GO:0016705|GO:0055114 G3DSA:3.20.20.30|PF00296|SSF51679 BKD09_RS40165 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS40170 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS40175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.40.190.10|PF13379|SSF160387|SSF53850 BKD09_RS40180 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|SM00100|SM00419|SSF46785|SSF51206 BKD09_RS40185 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000286|IPR023801 Histone deacetylase domain|Histone deacetylase superfamily G3DSA:3.40.800.20|PF00850|PR01270|SSF52768 BKD09_RS40190 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005511|IPR011042|IPR013658 SMP-30/Gluconolactonase/LRE-like region|Senescence marker protein-30 (SMP-30)|Six-bladed beta-propeller, TolB-like G3DSA:2.120.10.30|PF08450|PR01790|SSF63829 BKD09_RS40195 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011041|IPR011042|IPR012938 Glucose/Sorbosone dehydrogenase|Six-bladed beta-propeller, TolB-like|Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824|GO:0005975|GO:0016901|GO:0048038 G3DSA:2.120.10.30|PF07995|SSF50952 BKD09_RS40210 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001753|IPR014748|IPR029045 ClpP/crotonase-like domain|Crontonase, C-terminal|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:1.10.12.10|G3DSA:3.90.226.10|PF00378|SSF52096 BKD09_RS40215 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000101|IPR029055 Gamma-glutamyltranspeptidase|Nucleophile aminohydrolases, N-terminal GO:0003840|GO:0006749 PF01019|PR01210|SSF56235 BKD09_RS40220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006076|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01266|SSF51905 BKD09_RS40225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030679 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-type amino acid transport system, ATPase component, HisP-type|P-loop containing nucleoside triphosphate hydrolase GO:0003333|GO:0005524|GO:0015424|GO:0016887 G3DSA:3.40.50.300|PF00005|PIRSF039085|PS00211|SM00382|SSF52540 BKD09_RS40230 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 BKD09_RS40235 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001320|IPR001638 Ionotropic glutamate receptor|Solute-binding protein family 3/N-terminal domain of MltF GO:0004970|GO:0016020 G3DSA:3.40.190.10|PF00497|SM00062|SM00079|SSF53850 BKD09_RS40240 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001387|IPR010982|IPR011051|IPR013096|IPR014710 Cro/C1-type helix-turn-helix domain|Cupin 2, conserved barrel|Lambda repressor-like, DNA-binding domain|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0003677|GO:0043565 G3DSA:1.10.260.40|G3DSA:2.60.120.10|PF07883|PF13560|SM00530|SSF47413|SSF51182 BKD09_RS40245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000103|IPR006076|IPR023080|IPR023753 D-amino acid dehydrogenase DadA|FAD dependent oxidoreductase|FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0008718|GO:0016491|GO:0019478|GO:0055114 G3DSA:3.30.9.10|G3DSA:3.50.50.60|MF_01202|PF01266|PR00469|SSF51905|SSF54373 BKD09_RS40250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005814|IPR015421|IPR015422|IPR015424 Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0008483|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00202|PS00600|SSF53383 BKD09_RS40255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001387|IPR010982|IPR011051|IPR013096|IPR014710 Cro/C1-type helix-turn-helix domain|Cupin 2, conserved barrel|Lambda repressor-like, DNA-binding domain|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0003677|GO:0043565 G3DSA:1.10.260.40|G3DSA:2.60.120.10|PF01381|PF07883|SM00530|SSF47413|SSF51182 BKD09_RS40260 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000674|IPR008274 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF01315|PF02738|SM01008|SSF54665|SSF56003 BKD09_RS40265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002346|IPR005107|IPR016166|IPR016167|IPR016169 CO dehydrogenase flavoprotein, C-terminal|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|Molybdopterin dehydrogenase, FAD-binding GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.30.390.50|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF00941|PF03450|SM01092|SSF55447|SSF56176 BKD09_RS40270 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001041|IPR002888|IPR006058|IPR012675 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|[2Fe-2S]-binding GO:0009055|GO:0016491|GO:0046872|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.150.120|G3DSA:3.10.20.30|PF00111|PF01799|PS00197|SSF47741|SSF54292 BKD09_RS40275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|SSF46689|SSF48498 BKD09_RS40280 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032347 Protein of unknown function DUF4864 PF16156 BKD09_RS40285 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS40300 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 G3DSA:1.20.1600.10|PF02321|SSF56954 BKD09_RS40305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002355|IPR008972|IPR011706|IPR011707 Cupredoxin|Multicopper oxidase, copper-binding site|Multicopper oxidase, type 2|Multicopper oxidase, type 3 GO:0005507|GO:0016491|GO:0055114 G3DSA:2.60.40.420|PF07731|PF07732|PS00080|SSF49503 BKD09_RS40310 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000923|IPR008972 Blue (type 1) copper domain|Cupredoxin GO:0005507|GO:0009055 G3DSA:2.60.40.420|PF00127|SSF49503 BKD09_RS40315 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021647 Copper binding periplasmic protein CusF PF11604 BKD09_RS40320 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001712|IPR006301 Flagellar biosynthesis protein FlhA|Type III secretion system FHIPEP GO:0009306|GO:0016020|GO:0016021|GO:0044780 PF00771|PIRSF005419|PR00949|TIGR01398 BKD09_RS40330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000103|IPR023753 FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF07992|PR00368|PR00469|SSF51905 BKD09_RS40335 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003313|IPR009057|IPR018060|IPR018062|IPR020449 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PF14525|PR00032|PS00041|SM00342|SSF46689 BKD09_RS40340 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 PF10099 BKD09_RS40345 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|SSF88659|SSF88946|TIGR02937 BKD09_RS40350 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 PF02050|TIGR02473 BKD09_RS40355 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000194|IPR003593|IPR004100|IPR005714|IPR020003|IPR022426|IPR027417 AAA+ ATPase domain|ATPase, F1 complex alpha/beta subunit, N-terminal domain|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|ATPase, type III secretion system, FliI/YscN|Flagellum-specific ATP synthase FliI, clade 3|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0005737|GO:0009058|GO:0009288|GO:0015992|GO:0016887|GO:0030254|GO:0030257|GO:0044781|GO:0046034 G3DSA:3.40.50.300|PF00006|PF02874|PS00152|SM00382|SSF52540|TIGR01026|TIGR03498 BKD09_RS40360 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR001867|IPR011006|IPR011991 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF52172 BKD09_RS40365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007140 Protein of unknown function DUF350 PF03994 BKD09_RS40375 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005494|IPR016185 Glutathionylspermidine synthase, pre-ATP-grasp-like domain|Pre-ATP-grasp domain PF03738|SSF52440|SSF56059 BKD09_RS40385 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000780|IPR022641|IPR022642|IPR029063 Chemotaxis receptor methyltransferase CheR, N-terminal|MCP methyltransferase, CheR-type|MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal|S-adenosyl-L-methionine-dependent methyltransferase GO:0008757 G3DSA:1.10.155.10|G3DSA:3.40.50.150|PF01739|PF03705|PR00996|SM00138|SSF47757|SSF53335 BKD09_RS40390 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000673|IPR001789|IPR008248|IPR011006 CheY-like superfamily|Signal transduction response regulator, chemotaxis, CheB|Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase|Signal transduction response regulator, receiver domain GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 G3DSA:3.40.50.180|G3DSA:3.40.50.2300|MF_00099|PF00072|PF01339|PIRSF000876|SM00448|SSF52172|SSF52738 BKD09_RS40395 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 BKD09_RS40400 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 G3DSA:2.40.50.180|PF01584|SM00260|SSF50341 BKD09_RS40405 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR002545|IPR003594|IPR003661|IPR004105|IPR004358|IPR008207|IPR011006 CheW-like domain|CheY-like superfamily|Histidine kinase CheA-like, homodimeric domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0004673|GO:0004871|GO:0005737|GO:0006935|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.560|G3DSA:1.20.120.160|G3DSA:2.30.30.40|G3DSA:2.40.50.180|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF01584|PF01627|PF02518|PF02895|PR00344|SM00073|SM00260|SM00387|SM00448|SM01231|SSF47226|SSF47384|SSF50341|SSF52172|SSF55874 BKD09_RS40410 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018762 Histidine phosphotransferase PF10090 BKD09_RS40415 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000760 Inositol monophosphatase GO:0046854 G3DSA:3.30.540.10|G3DSA:3.40.190.80|PF00459|PR00377|SSF56655 BKD09_RS40425 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008325 Uncharacterised conserved protein UCP033924 PF06577|PIRSF033924 BKD09_RS40430 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic PD936484 BKD09_RS40440 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014976 Protein of unknown function DUF1837 PF08878 BKD09_RS40450 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021602 Protein of unknown function DUF3223 G3DSA:3.10.450.40|PF11523 BKD09_RS40460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003018|IPR003594|IPR004358|IPR011495|IPR029016 GAF domain|GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0005515|GO:0016310|GO:0016772 G3DSA:3.30.450.40|G3DSA:3.30.565.10|PF02518|PF07568|PF13185|PR00344|SM00065|SM00387|SSF55781|SSF55874 BKD09_RS40465 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SSF52172 BKD09_RS40470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR003594|IPR003661|IPR004358|IPR011006 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PR00344|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55874 BKD09_RS40475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003593|IPR014774|IPR027417|IPR030665 AAA+ ATPase domain|Circadian clock protein kinase KaiC|KaiC-like domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF06745|PIRSF039117|PR01874|SM00382|SSF52540 BKD09_RS40480 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR001610|IPR001789|IPR003594|IPR003661|IPR004358|IPR011006|IPR013767 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0006355|GO:0007165|GO:0016310|GO:0016772 G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF00989|PF02518|PF13426|PR00344|SM00086|SM00091|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55785|SSF55874|TIGR00229 BKD09_RS40485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR020846 Major facilitator superfamily domain G3DSA:1.20.1250.20|SSF103473 BKD09_RS40490 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010061|IPR015590|IPR016160|IPR016161|IPR016162|IPR016163 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde/histidinol dehydrogenase|Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|SSF53720|TIGR01722 BKD09_RS40495 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008995|IPR012340 Molybdate/tungstate binding, C-terminal|Nucleic acid-binding, OB-fold G3DSA:2.40.50.100|G3DSA:2.40.50.140|SSF50331 BKD09_RS40500 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011042|IPR013658 SMP-30/Gluconolactonase/LRE-like region|Six-bladed beta-propeller, TolB-like G3DSA:2.120.10.30|PF08450|SSF63829 BKD09_RS40505 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004681|IPR007387|IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein|Tripartite ATP-independent periplasmic transporter, DctQ component GO:0016021 PF04290|PF06808|TIGR00786 BKD09_RS40510 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004682|IPR018389 TRAP transporter solute receptor DctP/TeaA|TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 PF03480|PIRSF006470|TIGR00787 BKD09_RS40515 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005475|IPR009014|IPR029061|IPR033248 Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase, C-terminal domain|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0008152 G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF02779|PF02780|SM00861|SSF52518|SSF52922 BKD09_RS40520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005474|IPR029061 Thiamin diphosphate-binding fold|Transketolase, N-terminal G3DSA:3.40.50.970|PF00456|SSF52518 BKD09_RS40525 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SSF51735 BKD09_RS40530 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 BKD09_RS40550 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 PF00872 BKD09_RS40565 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002656 Acyltransferase 3 GO:0016747 PF01757 BKD09_RS40570 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025668 Transposase DDE domain PF13701 BKD09_RS40575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012337|IPR014735 Ribonuclease H-like domain|Transposase, Tn5-like, N-terminal GO:0003676 G3DSA:1.10.246.40|PF14706|SSF53098 BKD09_RS40610 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008949 Isoprenoid synthase domain G3DSA:1.10.600.10|SSF48576 BKD09_RS40615 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid G3DSA:1.50.10.20|SSF48239 BKD09_RS40620 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000092|IPR008949 Isoprenoid synthase domain|Polyprenyl synthetase GO:0008299 G3DSA:1.10.600.10|PF00348|PS00444|PS00723|SSF48576 BKD09_RS40625 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001128|IPR002403|IPR017972 Cytochrome P450|Cytochrome P450, E-class, group IV|Cytochrome P450, conserved site GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 G3DSA:1.10.630.10|PF00067|PR00385|PR00465|PS00086|SSF48264 BKD09_RS40630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SSF51735 BKD09_RS40635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 G3DSA:3.30.70.20|PF13459|PR00352|SSF54862 BKD09_RS40640 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001128|IPR002397|IPR017972 Cytochrome P450|Cytochrome P450, B-class|Cytochrome P450, conserved site GO:0005506|GO:0016705|GO:0020037|GO:0055114 G3DSA:1.10.630.10|PF00067|PR00359|PS00086|SSF48264 BKD09_RS40645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001128|IPR002397|IPR017972 Cytochrome P450|Cytochrome P450, B-class|Cytochrome P450, conserved site GO:0005506|GO:0016705|GO:0020037|GO:0055114 G3DSA:1.10.630.10|PF00067|PR00359|PR00385|PS00086|SSF48264 BKD09_RS40650 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001128|IPR002397|IPR017972 Cytochrome P450|Cytochrome P450, B-class|Cytochrome P450, conserved site GO:0005506|GO:0016705|GO:0020037|GO:0055114 G3DSA:1.10.630.10|PF00067|PR00359|PS00086|SSF48264 BKD09_RS40660 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006473 Peptidase C58, YopT-type domain GO:0004197|GO:0009405 PF03543|SSF54001|TIGR01586 BKD09_RS40665 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002514|IPR010921|IPR011991 Transposase IS3/IS911family|Trp repressor/replication initiator|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0004803|GO:0006313|GO:0043565 G3DSA:1.10.10.10|PF01527|SSF48295 BKD09_RS40670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002104|IPR011010|IPR013762|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|SSF56349 BKD09_RS40675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002104|IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|SSF56349 BKD09_RS40680 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|SSF53383 BKD09_RS40685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001412|IPR014729|IPR015413 Aminoacyl-tRNA synthetase, class I, conserved site|Methionyl/Leucyl tRNA synthetase|Rossmann-like alpha/beta/alpha sandwich fold GO:0000166|GO:0004812|GO:0005524|GO:0006418 G3DSA:3.40.50.620|PF09334|PS00178|SSF52374 BKD09_RS40695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008775 Phytanoyl-CoA dioxygenase G3DSA:2.60.120.620|PF05721|SSF51197 BKD09_RS40700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS40705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023753|IPR025700 FAD/NAD(P)-binding domain|L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF13434|SSF51905 BKD09_RS40735 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 G3DSA:3.60.130.10|PF02668|SSF51197 BKD09_RS40750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001940|IPR009003 Peptidase S1, PA clan|Peptidase S1C GO:0004252|GO:0006508 G3DSA:2.40.10.10|PF13365|PR00834|SSF50494 BKD09_RS40760 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002059|IPR011129|IPR012156|IPR012340|IPR019844 Cold shock protein|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|SM00357|SSF50249 BKD09_RS40765 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006840|IPR013024 Butirosin biosynthesis, BtrG-like|ChaC-like protein G3DSA:3.10.490.10|PF04752 BKD09_RS40775 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014016|IPR027417 P-loop containing nucleoside triphosphate hydrolase|UvrD-like Helicase, ATP-binding domain GO:0005524 G3DSA:3.40.50.300|PF00580|SSF52540 BKD09_RS40780 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003959|IPR027417 ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF13175|PF13304|SSF52540 BKD09_RS40795 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF13744|SM00530|SSF47413 BKD09_RS40800 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009241 Toxin HigB-like PF05973 BKD09_RS40805 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011991 Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|SSF46785 BKD09_RS40810 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018335|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Transcription regulator HTH, Crp-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0005622|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|PR00034|PS00042|SM00100|SM00419|SSF46785|SSF51206 BKD09_RS40815 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR001031|IPR009081|IPR020802|IPR020806|IPR025110|IPR029058 AMP-binding enzyme C-terminal domain|AMP-dependent synthetase/ligase|Alpha/Beta hydrolase fold|Phosphopantetheine binding ACP domain|Polyketide synthase, phosphopantetheine-binding domain|Polyketide synthase, thioesterase domain|Thioesterase GO:0003824|GO:0008152|GO:0009058|GO:0016788|GO:0031177 G3DSA:1.10.1200.10|G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.1820|G3DSA:3.40.50.980|PF00501|PF00550|PF00975|PF13193|SM00823|SM00824|SSF47336|SSF53474|SSF56801 BKD09_RS40825 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR001242|IPR006162|IPR009081|IPR010071|IPR020806|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase|Amino acid adenylation domain|Condensation domain|Phosphopantetheine attachment site|Phosphopantetheine binding ACP domain|Polyketide synthase, phosphopantetheine-binding domain GO:0003824|GO:0008152|GO:0031177 G3DSA:1.10.1200.10|G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF00550|PF00668|PF13193|PF13745|PS00012|PS00455|SM00823|SSF47336|SSF52777|SSF56801|TIGR01733 BKD09_RS40830 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010462|IPR011051|IPR014710 Ectoine synthase|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0019491|GO:0033990 G3DSA:2.60.120.10|MF_01255|PD080544|PF06339|SSF51182 BKD09_RS40855 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003721|IPR014729 Pantoate-beta-alanine ligase|Rossmann-like alpha/beta/alpha sandwich fold GO:0004592|GO:0015940 G3DSA:3.30.1300.10|G3DSA:3.40.50.620|MF_00158|PF02569|SSF52374|TIGR00018 BKD09_RS40860 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003700|IPR015813 Ketopantoate hydroxymethyltransferase|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0003864|GO:0015940 G3DSA:3.20.20.60|MF_00156|PF02548|PIRSF000388|SSF51621|TIGR00222 BKD09_RS40870 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005814|IPR005815|IPR015421|IPR015422|IPR015424 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA|Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0004015|GO:0008483|GO:0009102|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00202|SSF53383|TIGR00508 BKD09_RS40875 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004472|IPR027417 Dethiobiotin synthase BioD|P-loop containing nucleoside triphosphate hydrolase GO:0000287|GO:0004141|GO:0005524|GO:0009102 G3DSA:3.40.50.300|MF_00336|PF13500|PIRSF006755|SSF52540|TIGR00347 BKD09_RS40880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|SSF53383 BKD09_RS40885 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003190|IPR009010 Aspartate decarboxylase|Aspartate decarboxylase-like domain GO:0004068|GO:0006523 G3DSA:2.40.40.20|MF_00446|PD009294|PF02261|PIRSF006246|SSF50692|TIGR00223 BKD09_RS40890 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002684|IPR006638|IPR007197|IPR010722|IPR013785|IPR024177 Aldolase-type TIM barrel|Biotin and thiamin synthesis-associated domain|Biotin synthase|Biotin synthase/Biotin biosynthesis bifunctional protein BioAB|Elongator protein 3/MiaB/NifB|Radical SAM GO:0003824|GO:0004076|GO:0009102|GO:0051536 G3DSA:3.20.20.70|MF_01694|PF04055|PF06968|PIRSF001619|SM00729|SM00876|SSF102114|TIGR00433 BKD09_RS40895 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|SM00345|SM00895|SSF46785|SSF48008 BKD09_RS40900 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011008|IPR013097 Dimeric alpha-beta barrel|Stress responsive alpha-beta barrel G3DSA:3.30.70.900|PF07876|SM00886|SSF54909 BKD09_RS40905 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005801|IPR005802|IPR006805|IPR015890|IPR019999 ADC synthase|Anthranilate synthase component I, N-terminal|Anthranilate synthase component I-like|Chorismate-utilising enzyme, C-terminal|Para-aminobenzoate synthase, component I GO:0009058|GO:0009396|GO:0016833 G3DSA:3.60.120.10|PF00425|PF04715|PR00095|SSF56322|TIGR00553 BKD09_RS40910 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006221|IPR017926|IPR029062 Anthranilate synthase/para-aminobenzoate synthase like domain|Class I glutamine amidotransferase-like|Glutamine amidotransferase GO:0008152 G3DSA:3.40.50.880|PF00117|PR00096|PR00097|PR00099|SSF52317|TIGR00566 BKD09_RS40925 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011250|IPR020080|IPR023619|IPR027385 Outer membrane adhesin/peptidase omptin|Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel|Peptidase A26 GO:0004190|GO:0016021 G3DSA:2.40.128.90|G3DSA:2.40.160.20|PF13505|SSF56925|SSF69917 BKD09_RS40930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008146|IPR014746 Glutamine synthetase, catalytic domain|Glutamine synthetase/guanido kinase, catalytic domain GO:0003824|GO:0004356|GO:0006807 G3DSA:3.30.590.10|PF00120|SM01230|SSF55931 BKD09_RS40935 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 G3DSA:3.30.470.20|SSF56059 BKD09_RS40940 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892 BKD09_RS40945 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011697|IPR029062 Class I glutamine amidotransferase-like|Peptidase C26 GO:0006541|GO:0016787 G3DSA:3.40.50.880|PF07722|SSF52317 BKD09_RS40950 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005804 Fatty acid desaturase domain GO:0006629 PF00487 BKD09_RS41000 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002629|IPR006276|IPR013215 Cobalamin-independent methionine synthase|Cobalamin-independent methionine synthase MetE, C-terminal/archaeal|Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652|GO:0009086 G3DSA:3.20.20.210|MF_00172|PF01717|PF08267|PIRSF000382|SSF51726|TIGR01371 BKD09_RS41010 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016071 Staphylococcal nuclease (SNase-like), OB-fold G3DSA:2.40.50.90|PF00565|SM00318|SSF50199 BKD09_RS41015 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001765|IPR015892 Carbonic anhydrase|Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 G3DSA:3.40.1050.10|PF00484|PS00704|PS00705|SM00947|SSF53056 BKD09_RS41020 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009075|IPR009100|IPR013107|IPR013786 Acyl-CoA dehydrogenase, C-terminal domain|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF08028|PIRSF016578|SSF47203|SSF56645 BKD09_RS41025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006342|IPR029063 Methyltransferase FkbM|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF05050|SSF53335|TIGR01444 BKD09_RS41030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011032|IPR018369|IPR020818 Chaperonin GroES, conserved site|GroES chaperonin family|GroES-like GO:0005524|GO:0005737|GO:0006457 G3DSA:2.30.33.40|MF_00580|PF00166|PR00297|PS00681|SM00883|SSF50129 BKD09_RS41035 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001844|IPR002423|IPR018370|IPR027409|IPR027413 Chaperonin Cpn60|Chaperonin Cpn60, conserved site|Chaperonin Cpn60/TCP-1 family|GroEL-like apical domain|GroEL-like equatorial domain GO:0005524|GO:0005737|GO:0006457|GO:0042026 G3DSA:1.10.560.10|G3DSA:3.50.7.10|MF_00600|PF00118|PR00298|PS00296|SSF48592|SSF52029|SSF54849|TIGR02348 BKD09_RS41040 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006473 Peptidase C58, YopT-type domain GO:0004197|GO:0009405 PF03543|SSF54001|TIGR01586 BKD09_RS41060 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001584|IPR012337|IPR025948 HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13276|PF13683|SSF53098 BKD09_RS41065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002514|IPR009057 Homeodomain-like|Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 G3DSA:1.10.10.60|PF01527|SSF46689 BKD09_RS41070 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000123|IPR000477|IPR013597|IPR030931 Group II intron reverse transcriptase/maturase|Group II intron, maturase-specific|RNA-directed DNA polymerase (reverse transcriptase), msDNA|Reverse transcriptase domain GO:0003723|GO:0003964|GO:0006278 PF00078|PF08388|PR00866|SSF56672|TIGR04416 BKD09_RS41085 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000312|IPR005940|IPR017459 Anthranilate phosphoribosyl transferase|Glycosyl transferase family 3, N-terminal domain|Glycosyl transferase, family 3 GO:0000162|GO:0004048|GO:0008152|GO:0016757 G3DSA:1.20.970.10|G3DSA:3.40.1030.10|MF_00211|PF00591|PF02885|SSF47648|SSF52418|TIGR01245 BKD09_RS41095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 G3DSA:3.30.470.20|SSF56059 BKD09_RS41105 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005123|IPR006620 Oxoglutarate/iron-dependent dioxygenase|Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016491|GO:0016705|GO:0031418|GO:0055114 PF13640|SM00702 BKD09_RS41110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006913|IPR011057|IPR016084 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V|Haem oxygenase-like, multi-helical|Mss4-like GO:0008152|GO:0016846 G3DSA:1.20.910.10|G3DSA:3.90.1590.10|PF04828|SSF51316 BKD09_RS41115 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000049|IPR012255|IPR014729|IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal|Electron transfer flavoprotein, beta subunit|Electron transfer flavoprotein, beta-subunit, conserved site|Rossmann-like alpha/beta/alpha sandwich fold GO:0009055 G3DSA:3.40.50.620|PF01012|PIRSF000090|PS01065|SM00893|SSF52402 BKD09_RS41120 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002078|IPR002197|IPR003018|IPR003593|IPR009057|IPR010113|IPR025662|IPR025943|IPR025944|IPR027417|IPR029016 AAA+ ATPase domain|DNA binding HTH domain, Fis-type|GAF domain|GAF domain-like|Homeodomain-like|Nif-specific regulatory protein|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site GO:0003677|GO:0003700|GO:0005515|GO:0005524|GO:0006355|GO:0008134|GO:0009399|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.30.450.40|G3DSA:3.40.50.300|PF00158|PF01590|PF02954|PR01590|PS00675|PS00676|PS00688|SM00065|SM00382|SSF52540|SSF55781|TIGR01817 BKD09_RS41125 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SSF51735 BKD09_RS41135 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008716 NodZ GO:0009312|GO:0009877|GO:0016758 PD024571|PF05830|PIRSF020513 BKD09_RS41140 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003696|IPR031730 Carbamoyltransferase|Carbamoyltransferase, C-terminal GO:0003824|GO:0009058 PF02543|PF16861|SSF53067 BKD09_RS41145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 PF02543 BKD09_RS41155 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000412|IPR005981|IPR013525 ABC-2 transporter|ABC-2 type transporter|ABC-2 type transporter, NodJ GO:0005215|GO:0006810|GO:0009877|GO:0015772|GO:0016020 PF01061|PIRSF006648|PR00164|TIGR01291 BKD09_RS41160 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR005978|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Nodulation ABC transporter, NodI|P-loop containing nucleoside triphosphate hydrolase GO:0005215|GO:0005524|GO:0006810|GO:0009877|GO:0016020|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540|TIGR01288 BKD09_RS41165 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003696|IPR031730 Carbamoyltransferase|Carbamoyltransferase, C-terminal GO:0003824|GO:0009058 PF02543|PF16861 BKD09_RS41170 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008715|IPR020944|IPR029063 Nodulation protein S, NodS|S-adenosyl-L-methionine-dependent methyltransferase|SAM-dependent methyltransferase, NodS-related GO:0008757|GO:0009312|GO:0009877 G3DSA:3.40.50.150|PF05401|PIRSF009310|SSF53335 BKD09_RS41175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001173|IPR026463|IPR029044 Chitooligosaccharide synthase NodC|Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PD339107|PF00535|SSF53448|TIGR04242 BKD09_RS41180 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002509|IPR011330|IPR026402 Chitooligosaccharide deacetylase NodB|Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF01522|SSF88713|TIGR04243 BKD09_RS41185 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003484|IPR016181|IPR020567 Acyl-CoA N-acyltransferase|N-acyltransferase NodA|Nodulation protein A, NodA, conserved site GO:0005829|GO:0009877|GO:0016746 G3DSA:3.40.630.30|MF_00084|PF02474|PS01349|SSF55729|TIGR04245 BKD09_RS41195 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS41205 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS41215 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000551|IPR009061 MerR-type HTH domain|Putative DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.1660.10|PF13411|PR00040|PS00552|SM00422|SSF46955 BKD09_RS41225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS41250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 BKD09_RS41260 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925 BKD09_RS41265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004558|IPR006638|IPR007197|IPR010723|IPR023404 Coproporphyrinogen III oxidase, oxygen-independent, HemN|Elongator protein 3/MiaB/NifB|HemN, C-terminal|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0004109|GO:0005737|GO:0006779|GO:0051536|GO:0055114 G3DSA:3.80.30.20|PF04055|PF06969|PIRSF000167|SM00729|SSF102114|TIGR00538 BKD09_RS41275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 PF04966 BKD09_RS41305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000070|IPR011050|IPR012334 Pectin lyase fold|Pectin lyase fold/virulence factor|Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 G3DSA:2.160.20.10|PF01095|SSF51126 BKD09_RS41310 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000743|IPR006626|IPR011050|IPR012334 Glycoside hydrolase, family 28|Parallel beta-helix repeat|Pectin lyase fold|Pectin lyase fold/virulence factor GO:0004650|GO:0005975 G3DSA:2.160.20.10|PF00295|PS00502|SM00710|SSF51126 BKD09_RS41320 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002815|IPR024534 Domain of unknown function DUF2220|Spo11/DNA topoisomerase VI subunit A GO:0000737|GO:0003677|GO:0005694 G3DSA:3.40.1360.10|PF09983|SSF56726 BKD09_RS41325 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.1140.10|PF13555|PF13558|SSF52540 BKD09_RS41330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025449 Protein of unknown function DUF4194 PF13835 BKD09_RS41340 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413 BKD09_RS41345 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012893|IPR012894|IPR017508 HipA, N-terminal subdomain 1|HipA, N-terminal subdomain 2|HipA-like, C-terminal PF07804|PF07805|PF13657|TIGR03071 BKD09_RS41355 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13683|SSF53098 BKD09_RS41365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012903 Uncharacterised protein family, nitrogen fixation PF07862 BKD09_RS41380 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006638|IPR007197|IPR023404|IPR023984 Elongator protein 3/MiaB/NifB|Radical SAM|Radical SAM, alpha/beta horseshoe|Ribosomal peptide maturation radical SAM protein 1 GO:0003824|GO:0051536 G3DSA:3.80.30.20|PF04055|SM00729|SSF102114|TIGR03975 BKD09_RS41390 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008490 Transposase InsH, N-terminal PF05598 BKD09_RS41395 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002514|IPR009057 Homeodomain-like|Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 G3DSA:1.10.10.60|PF01527|SSF46689 BKD09_RS41400 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001375|IPR002469|IPR029058 Alpha/Beta hydrolase fold|Dipeptidylpeptidase IV, N-terminal domain|Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 G3DSA:2.140.10.30|G3DSA:3.40.50.1820|PF00326|PF00930|SSF53474|SSF82171 BKD09_RS41420 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013319|IPR013320 Concanavalin A-like lectin/glucanase domain|Glycoside hydrolase family 11/12 GO:0004553 G3DSA:2.60.120.180|SSF49899 BKD09_RS41435 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007543|IPR020889 LPS-assembly protein LptD|Organic solvent tolerance protein, C-terminal GO:0009279|GO:0010033|GO:0015920|GO:0019867|GO:0043165|GO:0061024 G3DSA:2.60.450.10|MF_01411|PF04453 BKD09_RS41450 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025161 Putative transposase IS4/IS5 family PF13340 BKD09_RS41460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR012337 Homeodomain-like|Ribonuclease H-like domain GO:0003676|GO:0003677 G3DSA:1.10.10.60|G3DSA:3.30.420.10|PF13358|PF13565|SSF46689 BKD09_RS41475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13673|SSF55729 BKD09_RS41485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001611|IPR003591|IPR029487|IPR032675 Leucine-rich repeat|Leucine-rich repeat domain, L domain-like|Leucine-rich repeat, typical subtype|Novel E3 ligase domain GO:0004842|GO:0005515|GO:0016567 G3DSA:1.20.1270.130|G3DSA:1.20.58.360|G3DSA:1.20.58.90|G3DSA:3.80.10.10|PF00560|PF14496|SM00364|SM00369|SSF52058 BKD09_RS41505 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018691 Protein of unknown function DUF2188 PF09954 BKD09_RS41530 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF02371 BKD09_RS41555 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002560|IPR029261 Transposase IS204/IS1001/IS1096/IS1165, DDE domain|Transposase IS204/IS1001/IS1096/IS1165, zinc-finger PF01610|PF14690 BKD09_RS41560 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371 BKD09_RS41565 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS41575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002059|IPR011129|IPR012156|IPR012340 Cold shock protein|Cold shock, CspA|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|SM00357|SSF50249 BKD09_RS41580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001375|IPR002470|IPR023302|IPR029058 Alpha/Beta hydrolase fold|Peptidase S9, prolyl oligopeptidase, catalytic domain|Peptidase S9A, N-terminal domain|Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508|GO:0008236|GO:0070008 G3DSA:3.40.50.1820|PF00326|PF02897|PR00862|SSF50993|SSF53474 BKD09_RS41590 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025161 Putative transposase IS4/IS5 family PF13340 BKD09_RS41610 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS41615 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025161 Putative transposase IS4/IS5 family PF13340 BKD09_RS41625 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 G3DSA:3.20.20.210|PF01717|SSF51726 BKD09_RS41630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004843|IPR026575|IPR029052 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA|Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0004115|GO:0016787 G3DSA:3.60.21.10|MF_00905|PF00149|SSF56300 BKD09_RS41640 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000709|IPR028081|IPR028082 Leu/Ile/Val-binding protein|Leucine-binding protein domain|Periplasmic binding protein-like I GO:0006865 G3DSA:3.40.50.2300|PF13458|PR00337|SSF53822 BKD09_RS41645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS41650 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS41655 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|SM00382|SSF52540 BKD09_RS41660 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS41665 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS41670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000033|IPR011042 LDLR class B repeat|Six-bladed beta-propeller, TolB-like G3DSA:2.120.10.30|PF00058|SM00135|SSF63829 BKD09_RS41675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002591|IPR017849|IPR017850 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824|GO:0008152 G3DSA:3.40.720.10|PF01663|SSF53649 BKD09_RS41680 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|SSF89796 BKD09_RS41690 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001077|IPR011991|IPR029063 O-methyltransferase, family 2|S-adenosyl-L-methionine-dependent methyltransferase|Winged helix-turn-helix DNA-binding domain GO:0008171 G3DSA:1.10.10.10|G3DSA:3.40.50.150|PF00891|SSF53335 BKD09_RS41695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011766|IPR012001|IPR017684|IPR029061 Phosphonopyruvate decarboxylase|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0003824|GO:0030976|GO:0032923|GO:0033980 G3DSA:3.40.50.970|PF02775|PF02776|SSF52518|TIGR03297 BKD09_RS41700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015590|IPR016161|IPR016162|IPR016163|IPR017656|IPR029510 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase|Putative phosphonoacetaldehyde dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00687|SSF53720|TIGR03250 BKD09_RS41705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000394|IPR007046|IPR007634 RNA polymerase sigma factor 54|RNA polymerase sigma factor 54, DNA-binding|RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PF00309|PF04552|PF04963|PIRSF000774|PR00045|PS00717|PS00718|TIGR02395 BKD09_RS41710 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002059|IPR011129|IPR012156|IPR012340|IPR019844 Cold shock protein|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|SM00357|SSF50249 BKD09_RS41715 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00196|PR00038|PS00622|SM00421|SSF46894 BKD09_RS41720 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012698|IPR015813 Phosphoenolpyruvate phosphomutase, core|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0050188 G3DSA:3.20.20.60|PF13714|SSF51621|TIGR02320 BKD09_RS41725 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002560|IPR029261 Transposase IS204/IS1001/IS1096/IS1165, DDE domain|Transposase IS204/IS1001/IS1096/IS1165, zinc-finger PF01610|PF14690 BKD09_RS41730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain PF01610 BKD09_RS41740 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|SM00382|SSF52540|SSF90123 BKD09_RS41750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000866|IPR011990|IPR012336 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Tetratricopeptide-like helical domain|Thioredoxin-like fold GO:0005515|GO:0016209|GO:0016491|GO:0055114 G3DSA:1.25.40.10|G3DSA:3.40.30.10|PF00578|SSF52833 BKD09_RS41770 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001962|IPR006426|IPR014729|IPR017932|IPR029055 Asparagine synthase|Asparagine synthase, glutamine-hydrolyzing|Glutamine amidotransferase type 2 domain|Nucleophile aminohydrolases, N-terminal|Rossmann-like alpha/beta/alpha sandwich fold GO:0004066|GO:0006529 G3DSA:3.40.50.620|G3DSA:3.60.20.10|PF00733|PF13537|PIRSF001589|SSF52402|SSF56235|TIGR01536 BKD09_RS41795 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004838|IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferases, class-I, pyridoxal-phosphate-binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PR00753|PS00105|SSF53383 BKD09_RS41805 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005814|IPR015421|IPR015422|IPR015424 Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0008483|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00202|SSF53383 BKD09_RS41820 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012912|IPR024047 Plasmid pRiA4b, Orf3|Protein MM3350-like domain G3DSA:3.10.290.30|PF07929|SSF159941 BKD09_RS41845 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010839 Protein of unknown function DUF1446 PF07287 BKD09_RS41855 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR020556|IPR023631 Amidase signature domain|Amidase, conserved site G3DSA:3.90.1300.10|PF01425|PS00571|SSF75304 BKD09_RS41860 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002933|IPR011650 Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|SSF53187 BKD09_RS41875 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008920|IPR011711 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal G3DSA:1.20.120.530|PF07729|SSF48008 BKD09_RS41880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004291|IPR024463|IPR024474 Transposase TnpC, homeodomain|Transposase, IS66|Zinc-finger binding domain of transposase IS66 PF03050|PF13005|PF13007|PF13817 BKD09_RS41885 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008878 Transposase IS66, Orf2 PF05717 BKD09_RS41890 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002514|IPR009057|IPR010921 Homeodomain-like|Transposase IS3/IS911family|Trp repressor/replication initiator GO:0003677|GO:0004803|GO:0006313|GO:0043565 G3DSA:1.10.10.60|PF01527|SSF48295 BKD09_RS41895 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011251|IPR016215 Luciferase-like domain|Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497|GO:0016705|GO:0055114 G3DSA:3.20.20.30|PF00296|PIRSF000337|SSF51679|TIGR03860 BKD09_RS41905 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801 BKD09_RS41925 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SSF51735 BKD09_RS41930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008567|IPR013785 3-keto-5-aminohexanoate cleavage enzyme|Aldolase-type TIM barrel GO:0003824|GO:0016740|GO:0019475 G3DSA:3.20.20.70|PF05853 BKD09_RS41945 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|SSF89796 BKD09_RS41950 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|SSF55729 BKD09_RS41970 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371 BKD09_RS41975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008567|IPR013785 3-keto-5-aminohexanoate cleavage enzyme|Aldolase-type TIM barrel GO:0003824|GO:0016740|GO:0019475 G3DSA:3.20.20.70|PF05853 BKD09_RS41985 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001466|IPR012338 Beta-lactamase-related|Beta-lactamase/transpeptidase-like G3DSA:3.40.710.10|PF00144|SSF56601 BKD09_RS41990 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SSF51735 BKD09_RS42005 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS42015 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13683|SSF53098 BKD09_RS42025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002514|IPR009057|IPR010921 Homeodomain-like|Transposase IS3/IS911family|Trp repressor/replication initiator GO:0003677|GO:0004803|GO:0006313|GO:0043565 G3DSA:1.10.10.60|PF01527|SSF48295 BKD09_RS42035 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015424|IPR023606 CoA-transferase family III domain|Pyridoxal phosphate-dependent transferase G3DSA:3.40.50.10540|SSF53383|SSF89796 BKD09_RS42065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004291|IPR024463|IPR024474 Transposase TnpC, homeodomain|Transposase, IS66|Zinc-finger binding domain of transposase IS66 PF03050|PF13005|PF13007|PF13817 BKD09_RS42070 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008878 Transposase IS66, Orf2 PF05717 BKD09_RS42080 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002514|IPR010921|IPR011991 Transposase IS3/IS911family|Trp repressor/replication initiator|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0004803|GO:0006313|GO:0043565 G3DSA:1.10.10.10|PF01527|SSF48295 BKD09_RS42090 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13683|SSF53098 BKD09_RS42095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540|TIGR01727 BKD09_RS42100 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540|TIGR01727 BKD09_RS42105 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR025966 ABC transporter type 1, transmembrane domain MetI-like|Oligopeptide transport permease C-like, N-terminal domain GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PF12911|SSF161098 BKD09_RS42110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS42115 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000914|IPR019546|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain|Twin-arginine translocation pathway, signal sequence, bacterial/archaeal GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|SSF53850|TIGR01409 BKD09_RS42120 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR012337 Homeodomain-like|Ribonuclease H-like domain GO:0003676|GO:0003677 G3DSA:1.10.10.60|G3DSA:3.30.420.10|PF13358|PF13565|SSF46689|SSF53098 BKD09_RS42125 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS42130 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.40.190.10|PF13416|SSF53850 BKD09_RS42135 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR005893|IPR008995|IPR013611|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Spermidine/putrescine ABC transporter, ATP-binding subunit|Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0015417|GO:0015846|GO:0016820|GO:0016887|GO:0043190 G3DSA:3.40.50.300|PF00005|PF08402|PS00211|SM00382|SSF50331|SSF52540|TIGR01187 BKD09_RS42145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029069 HotDog domain G3DSA:3.10.129.10|PF13279|SSF54637 BKD09_RS42170 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003684 Porin, alpha proteobacteria type GO:0006810|GO:0015288|GO:0016020 PF02530 BKD09_RS42175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF13545|SM00100|SSF46785|SSF51206 BKD09_RS42185 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006140|IPR016040|IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site|NAD(P)-binding domain GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF02826|PS00671|SSF51735|SSF52283 BKD09_RS42190 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.40.190.10|PF13343|SSF53850 BKD09_RS42195 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000587|IPR000994|IPR028980|IPR029149 Creatinase, N-terminal|Creatinase/Aminopeptidase P, N-terminal|Creatinase/Aminopeptidase P/Spt16, N-terminal|Peptidase M24, structural domain GO:0016787 G3DSA:3.40.350.10|G3DSA:3.90.230.10|PF00557|PF01321|SSF53092|SSF55920 BKD09_RS42200 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic SSF53850 BKD09_RS42205 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.40.190.10|PF13343|SSF53850 BKD09_RS42210 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000101|IPR029055 Gamma-glutamyltranspeptidase|Nucleophile aminohydrolases, N-terminal GO:0003840|GO:0006749 PF01019|PR01210|SSF56235 BKD09_RS42215 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000101|IPR029055 Gamma-glutamyltranspeptidase|Nucleophile aminohydrolases, N-terminal GO:0003840|GO:0006749 PF01019|PR01210|SSF56235 BKD09_RS42220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR008995|IPR013611|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0016887|GO:0043190 G3DSA:3.40.50.300|PF00005|PF08402|PS00211|SM00382|SSF50331|SSF52540 BKD09_RS42225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS42230 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS42235 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.40.190.10|PF13416|SSF53850 BKD09_RS42245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PD043187|PF00665|SSF53098 BKD09_RS42250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002611|IPR003593|IPR027417|IPR028350 AAA+ ATPase domain|DNA replication protein DnaC/insertion sequence putative ATP-binding protein|IstB-like ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF01695|PIRSF003073|SM00382|SSF52540 BKD09_RS42255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004291|IPR024463|IPR024474 Transposase TnpC, homeodomain|Transposase, IS66|Zinc-finger binding domain of transposase IS66 PF03050|PF13005|PF13007 BKD09_RS42260 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008878 Transposase IS66, Orf2 PF05717 BKD09_RS42265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002514|IPR010921|IPR011991 Transposase IS3/IS911family|Trp repressor/replication initiator|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0004803|GO:0006313|GO:0043565 G3DSA:1.10.10.10|PF01527|SSF48295 BKD09_RS42270 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000587|IPR000994|IPR028980|IPR029149 Creatinase, N-terminal|Creatinase/Aminopeptidase P, N-terminal|Creatinase/Aminopeptidase P/Spt16, N-terminal|Peptidase M24, structural domain GO:0016787 G3DSA:3.40.350.10|G3DSA:3.90.230.10|PF00557|PF01321|SSF53092|SSF55920 BKD09_RS42275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.40.190.10|PF13416|SSF53850 BKD09_RS42280 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002933|IPR011650|IPR017439 Amidohydrolase|Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PIRSF005962|SSF53187|SSF55031|TIGR01891 BKD09_RS42285 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 BKD09_RS42290 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 BKD09_RS42295 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001308|IPR014729|IPR014730|IPR014731|IPR018206|IPR029035 DHS-like NAD/FAD-binding domain|Electron transfer flavoprotein alpha subunit/FixB|Electron transfer flavoprotein subunit alpha, conserved site|Electron transfer flavoprotein, alpha subunit, C-terminal|Electron transfer flavoprotein, alpha/beta-subunit, N-terminal|Rossmann-like alpha/beta/alpha sandwich fold GO:0009055|GO:0050660 G3DSA:3.40.50.1220|G3DSA:3.40.50.620|PF00766|PF01012|PIRSF000089|PS00696|SM00893|SSF52402|SSF52467 BKD09_RS42300 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000049|IPR012255|IPR014729|IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal|Electron transfer flavoprotein, beta subunit|Electron transfer flavoprotein, beta-subunit, conserved site|Rossmann-like alpha/beta/alpha sandwich fold GO:0009055 G3DSA:3.40.50.620|PF01012|PIRSF000090|PS01065|SM00893|SSF52402 BKD09_RS42305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002376|IPR002912|IPR004810 ACT domain|Formyl transferase, N-terminal|Formyltetrahydrofolate deformylase GO:0006189|GO:0008152|GO:0008864|GO:0009058|GO:0016597|GO:0016742 G3DSA:3.30.70.260|G3DSA:3.40.50.170|MF_01927|PF00551|PF01842|PIRSF036480|PR01575|SSF53328|SSF55021|TIGR00655 BKD09_RS42310 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006076|IPR006222|IPR013977|IPR023753|IPR027266|IPR029043|IPR032503 FAD dependent oxidoreductase|FAD dependent oxidoreductase, central domain|FAD/NAD(P)-binding domain|GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1|Glycine cleavage T-protein, C-terminal barrel domain|Glycine cleavage T-protein-like, N-terminal|Glycine cleavage T-protein/YgfZ, C-terminal domain GO:0005515|GO:0016491|GO:0055114 G3DSA:2.40.30.110|G3DSA:3.30.1360.120|G3DSA:3.30.70.1400|G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01266|PF01571|PF08669|PF16350|SSF101790|SSF103025|SSF51905|SSF54373 BKD09_RS42315 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004429|IPR019818|IPR024084 Isocitrate/isopropylmalate dehydrogenase, conserved site|Isopropylmalate dehydrogenase|Isopropylmalate dehydrogenase-like domain GO:0000287|GO:0003862|GO:0005737|GO:0009098|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.718.10|MF_01033|PF00180|PS00470|SM01329|SSF53659|TIGR00169 BKD09_RS42320 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000672|IPR016040|IPR020630|IPR020631|IPR020867 NAD(P)-binding domain|Tetrahydrofolate dehydrogenase/cyclohydrolase|Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain|Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain|Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0004488|GO:0009396|GO:0055114 G3DSA:3.40.192.10|G3DSA:3.40.50.720|MF_01576|PF00763|PF02882|PR00085|PS00766|PS00767|SSF51735|SSF53223 BKD09_RS42330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018531|IPR027369 DinB/YfiT-like putative metal-dependent hydrolase|Domain of unknown function DUF1993 G3DSA:1.20.120.450|PF09351|SSF109854 BKD09_RS42335 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000089|IPR000891|IPR001882|IPR003379|IPR005479|IPR005481|IPR005482|IPR005930|IPR009057|IPR011053|IPR011054|IPR013785|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Aldolase-type TIM barrel|Biotin carboxylase, C-terminal|Biotin carboxylase-like, N-terminal domain|Biotin-binding site|Biotin/lipoyl attachment|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain|Carboxylase, conserved domain|Homeodomain-like|Pre-ATP-grasp domain|Pyruvate carboxylase|Pyruvate carboxyltransferase|Rudiment single hybrid motif|Single hybrid motif GO:0003677|GO:0003824|GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 G3DSA:1.10.10.60|G3DSA:2.40.50.100|G3DSA:3.10.600.10|G3DSA:3.20.20.70|G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|PF00289|PF00364|PF00682|PF02436|PF02785|PF02786|PIRSF001594|PS00188|PS00866|PS00867|SM00878|SSF51230|SSF51246|SSF51569|SSF52440|SSF56059|SSF89000|TIGR01235 BKD09_RS42345 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002933|IPR011650 Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|SSF53187 BKD09_RS42355 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000587|IPR000994|IPR028980|IPR029149 Creatinase, N-terminal|Creatinase/Aminopeptidase P, N-terminal|Creatinase/Aminopeptidase P/Spt16, N-terminal|Peptidase M24, structural domain GO:0016787 G3DSA:3.40.350.10|G3DSA:3.90.230.10|PF00557|PF01321|SSF53092|SSF55920 BKD09_RS42365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|SSF89796 BKD09_RS42370 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006395|IPR022662|IPR022665|IPR029017|IPR029065 Enolase C-terminal domain-like|Enolase N-terminal domain-like|Methylaspartate ammonia-lyase|Methylaspartate ammonia-lyase, C-terminal|Methylaspartate ammonia-lyase, N-terminal GO:0050096 G3DSA:3.20.20.120|G3DSA:3.30.390.10|PF05034|PF07476|PIRSF017107|SSF51604|SSF54826|TIGR01502 BKD09_RS42375 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015590|IPR016160|IPR016161|IPR016162|IPR016163 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|SSF53720 BKD09_RS42380 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005814|IPR015421|IPR015422|IPR015424 Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0008483|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00202|PIRSF000521|PS00600|SSF53383 BKD09_RS42385 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000485|IPR011008|IPR011991|IPR019887|IPR019888 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13412|PR00033|SM00344|SSF46785|SSF54909 BKD09_RS42390 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010290|IPR020846 Major facilitator superfamily domain|Transmembrane secretion effector G3DSA:1.20.1250.20|PF05977|SSF103473 BKD09_RS42405 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002509|IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF01522|SSF88713 BKD09_RS42410 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000485|IPR011008|IPR011991|IPR019887|IPR019888 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13412|PR00033|SM00344|SSF46785|SSF54909 BKD09_RS42420 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004291 Transposase, IS66 PF03050 BKD09_RS42425 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001214|IPR009207 Histone methyltransferase, PBCV type putative|SET domain GO:0005515 G3DSA:2.170.270.10|PF00856|PIRSF022536|SM00317|SSF82199 BKD09_RS42430 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic SSF51197 BKD09_RS42435 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004637|IPR005814|IPR012773|IPR015421|IPR015422|IPR015424 2,4-diaminobutyrate 4-transaminase|Aminotransferase class-III|Ectoine biosynthetic protein|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0008483|GO:0009058|GO:0019491|GO:0030170|GO:0047307 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00202|SSF53383|TIGR00709|TIGR02407 BKD09_RS42440 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007197|IPR013785 Aldolase-type TIM barrel|Radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|PF04055|PF13394|SSF102114 BKD09_RS42445 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001584|IPR009057|IPR012337 Homeodomain-like|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:3.30.420.10|PF00665|PF13551|SSF46689|SSF53098 BKD09_RS42455 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013785 Aldolase-type TIM barrel GO:0003824 G3DSA:3.20.20.70|SSF102114 BKD09_RS42465 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|PIRSF006603|TIGR00797 BKD09_RS42470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR001242|IPR006162|IPR009081|IPR010071|IPR020806|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase|Amino acid adenylation domain|Condensation domain|Phosphopantetheine attachment site|Phosphopantetheine binding ACP domain|Polyketide synthase, phosphopantetheine-binding domain GO:0003824|GO:0008152|GO:0031177 G3DSA:1.10.1200.10|G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF00550|PF00668|PF13193|PF13745|PS00012|PS00455|SM00823|SSF47336|SSF52777|SSF56801|TIGR01733 BKD09_RS42500 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF12844|SM00530|SSF47413 BKD09_RS42505 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS42510 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018754 Protein of unknown function DUF2285 PF10074 BKD09_RS42520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018754 Protein of unknown function DUF2285 PF10074 BKD09_RS42525 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF12844|SM00530|SSF47413 BKD09_RS42530 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 G3DSA:3.60.130.10|PF02668|SSF51197 BKD09_RS42540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007863|IPR011237|IPR011249|IPR011765 Metalloenzyme, LuxS/M16 peptidase-like|Peptidase M16 domain|Peptidase M16, C-terminal|Peptidase M16, N-terminal GO:0003824|GO:0046872 G3DSA:3.30.830.10|PF00675|PF05193|SSF63411 BKD09_RS42545 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001431|IPR007863|IPR011237|IPR011249|IPR011765 Metalloenzyme, LuxS/M16 peptidase-like|Peptidase M16 domain|Peptidase M16, C-terminal|Peptidase M16, N-terminal|Peptidase M16, zinc-binding site GO:0003824|GO:0004222|GO:0006508|GO:0046872 G3DSA:3.30.830.10|PF00675|PF05193|PS00143|SSF63411 BKD09_RS42550 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|SM00382|SSF52540|SSF90123 BKD09_RS42555 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000866|IPR011990|IPR012336 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Tetratricopeptide-like helical domain|Thioredoxin-like fold GO:0005515|GO:0016209|GO:0016491|GO:0055114 G3DSA:1.25.40.10|G3DSA:3.40.30.10|PF00578|SSF52833 BKD09_RS42560 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 G3DSA:3.20.20.60|SSF51621 BKD09_RS42565 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF12844|SM00530|SSF47413 BKD09_RS42570 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS42575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018754 Protein of unknown function DUF2285 PF10074 BKD09_RS42580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018754 Protein of unknown function DUF2285 PF10074 BKD09_RS42585 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413 BKD09_RS42595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 G3DSA:3.60.130.10|PF02668|SSF51197 BKD09_RS42610 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000845|IPR006674|IPR027417 HD domain|Nucleoside phosphorylase domain|P-loop containing nucleoside triphosphate hydrolase GO:0003824|GO:0009116 G3DSA:1.10.3210.10|G3DSA:3.40.50.1580|G3DSA:3.40.50.300|PF01048|PF13023|SSF109604|SSF52540|SSF53167 BKD09_RS42620 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR024131 Uncharacterised protein family UPF0489 PF12640 BKD09_RS42635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007685 RelA/SpoT GO:0015969 G3DSA:3.30.460.10|PF04607|SM00954|SSF81301 BKD09_RS42645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SSF48452 BKD09_RS42695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011048|IPR015943 Cytochrome cd1-nitrite reductase-like, haem d1 domain|WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.130.10.10|SSF51004 BKD09_RS42705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|SM00849|SSF56281 BKD09_RS42710 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006314|IPR011008 Dimeric alpha-beta barrel|Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 PF04261|SSF54909 BKD09_RS42730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002818|IPR029062 Class I glutamine amidotransferase-like|DJ-1/PfpI G3DSA:3.40.50.880|PF01965|SSF52317 BKD09_RS42735 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002227|IPR008922 Tyrosinase copper-binding domain|Uncharacterised domain, di-copper centre GO:0008152|GO:0016491 G3DSA:1.10.1280.10|PF00264|PR00092|PS00497|PS00498|SSF48056 BKD09_RS42740 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR024079 Metallopeptidase, catalytic domain GO:0008237 G3DSA:3.40.390.10|SSF55486 BKD09_RS42750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001117|IPR002355|IPR008972|IPR011706|IPR011707 Cupredoxin|Multicopper oxidase, copper-binding site|Multicopper oxidase, type 1|Multicopper oxidase, type 2|Multicopper oxidase, type 3 GO:0005507|GO:0016491|GO:0055114 G3DSA:2.60.40.420|PF00394|PF07731|PF07732|PS00080|SSF49503 BKD09_RS42755 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000923|IPR008972 Blue (type 1) copper domain|Cupredoxin GO:0005507|GO:0009055 G3DSA:2.60.40.420|PF00127|SSF49503 BKD09_RS42765 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002372|IPR011047|IPR018391|IPR027295 Pyrrolo-quinoline quinone beta-propeller repeat|Pyrrolo-quinoline quinone repeat|Quinoprotein alcohol dehydrogenase-like domain|Quinoprotein alcohol dehydrogenase-like superfamily G3DSA:2.140.10.10|PF13360|SM00564|SSF50998 BKD09_RS42770 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011051|IPR014710 RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|SSF51182 BKD09_RS42775 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF12831|PR00420|SSF51905 BKD09_RS42780 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007197|IPR013785|IPR023885 4Fe4S-binding SPASM domain|Aldolase-type TIM barrel|Radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|PF04055|PF13353|SSF102114|TIGR04085 BKD09_RS42795 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic PF12902 BKD09_RS42800 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005122 Uracil-DNA glycosylase-like G3DSA:3.40.470.10|SSF52141 BKD09_RS42820 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010359 HTH domain, IrrE-type PF06114 BKD09_RS42825 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF12844|SM00530|SSF47413 BKD09_RS42840 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002641|IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase|Patatin/Phospholipase A2-related GO:0006629|GO:0008152 G3DSA:3.40.1090.10|PF01734|SSF52151 BKD09_RS42855 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system PF08843 BKD09_RS42860 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025159 Transcriptional regulator, AbiEi antitoxin PF13338 BKD09_RS42880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system PF08843 BKD09_RS42885 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021561|IPR033455 Transcriptional regulator AbiEi antitoxin, N-terminal domain|Transcriptional regulator, AbiEi 3 antitoxin, Type IV TA system PF11459|PF17194 BKD09_RS42890 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029035 DHS-like NAD/FAD-binding domain G3DSA:3.40.50.1220|PF13289|SSF52467 BKD09_RS42895 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012337 Ribonuclease H-like domain GO:0003676 G3DSA:3.30.420.10|G3DSA:3.40.50.2300|SSF53098 BKD09_RS42915 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000485|IPR011008|IPR011991|IPR019887|IPR019888 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13412|PR00033|SM00344|SSF46785|SSF54909 BKD09_RS42920 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003953|IPR023753|IPR027477 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain|Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|G3DSA:3.90.700.10|PF00890|PR00411|SSF51905|SSF56425 BKD09_RS42925 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008322|IPR009215|IPR013785|IPR015813 Aldolase-type TIM barrel|Pyruvate/Phosphoenolpyruvate kinase-like domain|TIM-barrel domain, IGPS-like|Uncharacterised protein family UPF0261 GO:0003824 G3DSA:3.20.20.70|PF06792|PF09370|SSF51621 BKD09_RS42945 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR023753 FAD/NAD(P)-binding domain|PAS domain GO:0016491|GO:0055114 G3DSA:3.30.450.20|G3DSA:3.50.50.60|PF07992|SSF51905|SSF55785 BKD09_RS42950 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012903 Uncharacterised protein family, nitrogen fixation PF07862 BKD09_RS42985 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF13560|SM00530|SSF47413 BKD09_RS42990 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012893|IPR012894|IPR017508 HipA, N-terminal subdomain 1|HipA, N-terminal subdomain 2|HipA-like, C-terminal PF07804|PF07805|PF13657|TIGR03071 BKD09_RS42995 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001736|IPR009003|IPR025202 Peptidase S1, PA clan|Phospholipase D-like domain|Phospholipase D/Transphosphatidylase GO:0003824 G3DSA:2.40.10.10|G3DSA:3.30.870.10|PF13091|PF13365|SM00155|SSF50494|SSF56024 BKD09_RS43020 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006665 OmpA-like domain G3DSA:3.30.1330.60|PF00691|SSF103088 BKD09_RS43025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|SSF52540 BKD09_RS43030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009003 Peptidase S1, PA clan G3DSA:2.40.10.10|PF13365|SSF50494 BKD09_RS43035 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009003|IPR028301 Peptidase S1, PA clan|Serine proteases, V8 family, histidine active site G3DSA:2.40.10.10|PF13365|PS00672|SSF50494 BKD09_RS43040 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008969|IPR014766 Carboxypeptidase, regulatory domain|Carboxypeptidase-like, regulatory domain G3DSA:2.60.40.1120|PF13620|SSF49464 BKD09_RS43045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001254|IPR008256|IPR009003|IPR018114|IPR028301 Peptidase S1, PA clan|Peptidase S1B|Serine proteases, V8 family, histidine active site|Serine proteases, trypsin domain|Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508|GO:0008236 G3DSA:2.40.10.10|PF00089|PR00839|PS00134|PS00672|SM00020|SSF50494 BKD09_RS43060 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000594|IPR016040 NAD(P)-binding domain|THIF-type NAD/FAD binding fold GO:0008641 G3DSA:3.40.50.720|PF00899|SSF69572 BKD09_RS43065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028090 JAB domain, prokaryotic G3DSA:3.40.140.10|PF14464|SSF102712 BKD09_RS43090 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371 BKD09_RS43095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001584|IPR012337|IPR025948 HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13276|PF13683|SSF53098 BKD09_RS43100 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002514|IPR009057 Homeodomain-like|Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 G3DSA:1.10.10.60|PF01527|SSF46689 BKD09_RS43110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003696|IPR031730 Carbamoyltransferase|Carbamoyltransferase, C-terminal GO:0003824|GO:0009058 PF02543|PF16861 BKD09_RS43115 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|SSF53383 BKD09_RS43120 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR017932|IPR029055|IPR029057 Glutamine amidotransferase type 2 domain|Nucleophile aminohydrolases, N-terminal|Phosphoribosyltransferase-like G3DSA:3.40.50.2020|G3DSA:3.60.20.10|PF13537|SSF53271|SSF56235 BKD09_RS43125 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023214 HAD-like domain G3DSA:3.40.50.1000|PF13419|SSF56784 BKD09_RS43130 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006115|IPR008927|IPR013328|IPR015815|IPR016040|IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain|3-hydroxyisobutyrate dehydrogenase-related|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, NADP-binding|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0004616|GO:0016491|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF03446|PF14833|PIRSF000103|SSF48179|SSF51735 BKD09_RS43135 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015590|IPR016161|IPR016162|IPR016163 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|SSF53720 BKD09_RS43140 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002220|IPR013785 Aldolase-type TIM barrel|DapA-like GO:0003824|GO:0008152|GO:0016829 G3DSA:3.20.20.70|PF00701|PIRSF001365|SM01130|SSF51569 BKD09_RS43145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008928|IPR012341 Six-hairpin glycosidase|Six-hairpin glycosidase-like GO:0003824 G3DSA:1.50.10.10|SSF48208 BKD09_RS43150 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|SSF89796 BKD09_RS43155 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000843|IPR010982|IPR028082 LacI-type HTH domain|Lambda repressor-like, DNA-binding domain|Periplasmic binding protein-like I GO:0003677|GO:0006355 G3DSA:1.10.260.40|G3DSA:3.40.50.2300|PF00356|PF13377|PR00036|PS00356|SM00354|SSF47413|SSF53822 BKD09_RS43160 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 SSF89550 BKD09_RS43165 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS43175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001753|IPR014748|IPR018376|IPR029045 ClpP/crotonase-like domain|Crontonase, C-terminal|Crotonase superfamily|Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 G3DSA:1.10.12.10|G3DSA:3.90.226.10|PF00378|PS00166|SSF52096 BKD09_RS43180 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS43185 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006680|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase GO:0016787 G3DSA:3.20.20.140|PF04909|SSF51556 BKD09_RS43190 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS43195 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|SM00382|SSF52540 BKD09_RS43200 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS43205 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS43210 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS43215 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 G3DSA:1.10.260.40 BKD09_RS43230 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003953|IPR023753|IPR027477 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain|Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|G3DSA:3.90.700.10|PF00890|PR00411|SSF51905|SSF56425 BKD09_RS43235 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009215|IPR013785|IPR015813 Aldolase-type TIM barrel|Pyruvate/Phosphoenolpyruvate kinase-like domain|TIM-barrel domain, IGPS-like GO:0003824 G3DSA:3.20.20.70|PF09370|PIRSF034452|SSF51621 BKD09_RS43240 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008322 Uncharacterised protein family UPF0261 PF06792|PIRSF033271 BKD09_RS43250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013785|IPR015813 Aldolase-type TIM barrel|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 G3DSA:3.20.20.70|SSF51621 BKD09_RS43255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002078|IPR002197|IPR009057|IPR009215|IPR013785|IPR015813|IPR027417 Aldolase-type TIM barrel|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|Pyruvate/Phosphoenolpyruvate kinase-like domain|RNA polymerase sigma factor 54 interaction domain|TIM-barrel domain, IGPS-like GO:0003677|GO:0003824|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.20.20.70|G3DSA:3.40.50.300|PF00158|PF02954|PF09370|PR01590|SSF46689|SSF51621|SSF52540 BKD09_RS43260 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR008995|IPR012340|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:2.40.50.100|G3DSA:2.40.50.140|G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF50331|SSF52540 BKD09_RS43265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006357|IPR023214|IPR023215 HAD-like domain|HAD-superfamily hydrolase, subfamily IIA|Nitrophenylphosphatase-like domain G3DSA:3.40.50.1000|G3DSA:3.40.50.10410|PF13242|PF13344|PIRSF000915|SSF56784|TIGR01460 BKD09_RS43270 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00080|PR00081|SSF51735 BKD09_RS43275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002139|IPR002173|IPR011611|IPR011877|IPR029056 Carbohydrate kinase PfkB|Carbohydrate/puine kinase, PfkB, conserved site|Ribokinase|Ribokinase-like|Ribokinase/fructokinase GO:0004747|GO:0006014|GO:0016773 G3DSA:3.40.1190.20|MF_01987|PF00294|PR00990|PS00584|SSF53613 BKD09_RS43280 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS43285 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS43290 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 G3DSA:3.40.190.10|PF01547|SSF53850 BKD09_RS43320 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000394|IPR007046|IPR007634 RNA polymerase sigma factor 54|RNA polymerase sigma factor 54, DNA-binding|RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PF00309|PF04552|PF04963|PIRSF000774|PR00045|PS00717|PS00718|TIGR02395 BKD09_RS43325 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR005143|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription factor LuxR-like, autoinducer-binding domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.80|PF00196|PF03472|PR00038|PS00622|SM00421|SSF46894|SSF75516 BKD09_RS43330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001623 DnaJ domain G3DSA:1.10.287.110|PF00226|PR00625|SM00271|SSF46565 BKD09_RS43340 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001214 SET domain GO:0005515 G3DSA:2.170.270.10|PF00856|SSF82199 BKD09_RS43350 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000036|IPR011250|IPR020080|IPR023619|IPR027385 Outer membrane adhesin/peptidase omptin|Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel|Peptidase A26|Peptidase A26, omptin GO:0004175|GO:0004190|GO:0006508|GO:0009279|GO:0016021 G3DSA:2.40.128.90|G3DSA:2.40.160.20|PF01278|PF13505|SSF56925|SSF69917 BKD09_RS43355 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR012337 Homeodomain-like|Ribonuclease H-like domain GO:0003676|GO:0003677 G3DSA:1.10.10.60|G3DSA:3.30.420.10|PF13358|PF13565|SSF46689|SSF53098 BKD09_RS43360 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PD043187|PF00665|SSF53098 BKD09_RS43365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002611|IPR003593|IPR027417|IPR028350 AAA+ ATPase domain|DNA replication protein DnaC/insertion sequence putative ATP-binding protein|IstB-like ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF01695|PIRSF003073|SM00382|SSF52540 BKD09_RS43395 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005828|IPR005829|IPR020846 Major facilitator superfamily domain|Major facilitator, sugar transporter-like|Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1250.20|PF00083|PS00217|SSF103473 BKD09_RS43400 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|SSF55729 BKD09_RS43425 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025161 Putative transposase IS4/IS5 family PF13340 BKD09_RS43430 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001584|IPR009057|IPR012337 Homeodomain-like|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:3.30.420.10|PF00665|PF13551|SSF46689|SSF53098 BKD09_RS43440 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001128|IPR002397|IPR017972 Cytochrome P450|Cytochrome P450, B-class|Cytochrome P450, conserved site GO:0005506|GO:0016705|GO:0020037|GO:0055114 G3DSA:1.10.630.10|PF00067|PR00359|PR00385|PS00086|SSF48264 BKD09_RS43445 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003721|IPR014729 Pantoate-beta-alanine ligase|Rossmann-like alpha/beta/alpha sandwich fold GO:0004592|GO:0015940 G3DSA:3.30.1300.10|G3DSA:3.40.50.620|PF02569|SSF52374 BKD09_RS43450 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001646 Pentapeptide repeat PF00805|PF13599|SSF141571 BKD09_RS43465 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010694 Uncharacterised protein family VirK PF06903 BKD09_RS43480 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR001867|IPR011006|IPR011991 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF52172 BKD09_RS43485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001775|IPR004846|IPR007055|IPR014004|IPR032789 BON domain|GspD/PilQ family|Pilus formation protein, N-terminal|Transport-associated and nodulation domain, bacteria|Type II/III secretion system GO:0009306 PF00263|PF04972|PF13629|PR00811|SM00749 BKD09_RS43515 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002611|IPR003593|IPR013690|IPR027417|IPR028350 AAA+ ATPase domain|DNA replication protein DnaC/insertion sequence putative ATP-binding protein|IstB-like ATP binding N-terminal|IstB-like ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF01695|PF08483|PIRSF003073|SM00382|SSF52540 BKD09_RS43520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001584|IPR011991|IPR012337|IPR013249 Integrase, catalytic core|RNA polymerase sigma factor 70, region 4 type 2|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0015074|GO:0016987 G3DSA:1.10.10.10|G3DSA:3.30.420.10|PF00665|PF08281|SSF53098 BKD09_RS43525 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008490 Transposase InsH, N-terminal PF05598 BKD09_RS43535 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012337 Ribonuclease H-like domain GO:0003676 G3DSA:3.30.420.10|PF13358 BKD09_RS43545 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF02371 BKD09_RS43560 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006135|IPR006307|IPR029025 Type III exporter system, secretion apparatus protein BsaZ|Type III secretion system substrate exporter|Type III secretion system substrate exporter, C-terminal GO:0009306|GO:0016020|GO:0016021 G3DSA:3.40.1690.10|PF01312|PR00950|SSF160544|TIGR01404 BKD09_RS43565 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002010|IPR006304 Type III secretion protein SpaR/YscT|Type III secretion system inner membrane R protein GO:0006605|GO:0006810|GO:0016020|GO:0016021 PF01311|PR00953|TIGR01401 BKD09_RS43570 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PF01313|PR00952 BKD09_RS43575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005773|IPR005838 Type III secretion system inner membrane P protein|Yop virulence translocation protein R GO:0009306|GO:0015031|GO:0016020|GO:0016021 PF00813|PR01302|PS01060|PS01061|TIGR01102 BKD09_RS43580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001172|IPR001543|IPR013385 Flagellar motor switch FliN/Type III secretion HrcQb|Surface presentation of antigen (SpoA)|Type III secretion system apparatus protein YscQ/HrcQ/SpaO GO:0003774|GO:0006935|GO:0009425|GO:0030254|GO:0071973 G3DSA:2.30.330.10|PF01052|PR00956|SSF101801|TIGR02551 BKD09_RS43585 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic PD035675 BKD09_RS43590 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000194|IPR003593|IPR004100|IPR005714|IPR013380|IPR027417 AAA+ ATPase domain|ATPase, F1 complex alpha/beta subunit, N-terminal domain|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, type III secretion system, FliI/YscN|ATPase, type III secretion system, H+-transporting|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0005737|GO:0006754|GO:0009058|GO:0015992|GO:0016887|GO:0030254|GO:0030257|GO:0046034|GO:0046961 G3DSA:3.40.50.300|PF00006|PF02874|SM00382|SSF52540|TIGR01026|TIGR02546 BKD09_RS43595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010586|IPR012842 Nodulation NolV|Type III secretion system HrpE/YscL GO:0009877 PF06635|TIGR02499 BKD09_RS43605 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003282|IPR006182 Secretory protein YscJ/FliF|Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 PF01514|PR01338|TIGR02544 BKD09_RS43610 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016775 Nodulation, NolB PD034734 BKD09_RS43630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR012337 Homeodomain-like|Ribonuclease H-like domain GO:0003676|GO:0003677 G3DSA:1.10.10.60|G3DSA:3.30.420.10|PF13358|PF13565|SSF46689|SSF53098 BKD09_RS43635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011086 Domain of unknown function DUF1521 PF07481 BKD09_RS43650 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic PD128471 BKD09_RS43660 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SSF48452 BKD09_RS43665 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001712|IPR006302|IPR025505 FHIPEP conserved site|Type III secretion protein HrcV|Type III secretion system FHIPEP GO:0009306|GO:0015031|GO:0016020|GO:0016021 PF00771|PIRSF005419|PR00949|PS00994|TIGR01399 BKD09_RS43670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13432|PF14559|SSF48452 BKD09_RS43680 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001431|IPR007863|IPR011237|IPR011249|IPR011765 Metalloenzyme, LuxS/M16 peptidase-like|Peptidase M16 domain|Peptidase M16, C-terminal|Peptidase M16, N-terminal|Peptidase M16, zinc-binding site GO:0003824|GO:0004222|GO:0006508|GO:0046872 G3DSA:3.30.830.10|PF00675|PF05193|PS00143|SSF63411 BKD09_RS43695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|SSF52540 BKD09_RS43700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase SSF52540 BKD09_RS43705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029487 Novel E3 ligase domain GO:0004842|GO:0016567 G3DSA:1.20.58.360|PF14496 BKD09_RS43710 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032675 Leucine-rich repeat domain, L domain-like G3DSA:3.80.10.10 BKD09_RS43720 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR005116|IPR008995|IPR011868|IPR027417 AAA+ ATPase domain|ABC transporter-like|Molybdate ABC transporter, ATP-binding protein|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 1 GO:0005524|GO:0015098|GO:0015689|GO:0016020|GO:0016887 G3DSA:2.40.50.100|G3DSA:3.40.50.300|PF00005|PF03459|SM00382|SSF50331|SSF52540|TIGR02142 BKD09_RS43725 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 PF00872|PS01007 BKD09_RS43730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000866|IPR012336|IPR024706 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Peroxiredoxin, AhpC-type|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF00578|PIRSF000239|SSF52833 BKD09_RS43735 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003779|IPR004674|IPR004675|IPR029032 AhpD-like|Alkylhydroperoxidase AhpD|Alkylhydroperoxidase AhpD core|Carboxymuconolactone decarboxylase-like GO:0006979|GO:0032843|GO:0051920|GO:0055114 G3DSA:1.20.1290.10|MF_01676|PF02627|SSF69118|TIGR00777|TIGR00778 BKD09_RS43740 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007859|IPR012206 ETF-QO/FixX|Ferredoxin-like, FixX GO:0005506|GO:0051536|GO:0055114 G3DSA:3.30.70.20|PF05187|PIRSF036548|SSF54862 BKD09_RS43745 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002938|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain GO:0016491|GO:0055114|GO:0071949 G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01494|SSF51905|SSF54373 BKD09_RS43750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001308|IPR014729|IPR014730|IPR014731|IPR018206|IPR029035 DHS-like NAD/FAD-binding domain|Electron transfer flavoprotein alpha subunit/FixB|Electron transfer flavoprotein subunit alpha, conserved site|Electron transfer flavoprotein, alpha subunit, C-terminal|Electron transfer flavoprotein, alpha/beta-subunit, N-terminal|Rossmann-like alpha/beta/alpha sandwich fold GO:0009055|GO:0050660 G3DSA:3.40.50.1220|G3DSA:3.40.50.620|PF00766|PF01012|PIRSF000089|PS00696|SM00893|SSF52402|SSF52467 BKD09_RS43755 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004893 Nitrogen fixation protein NifW GO:0009399 MF_00529|PF03206|PIRSF005790 BKD09_RS43760 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006975 NifQ GO:0009399|GO:0030151 PF04891 BKD09_RS43765 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000392|IPR005977|IPR027417|IPR030655 NifH/chlL conserved site|Nitrogenase iron protein NifH|Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0009399|GO:0016163|GO:0016491|GO:0016612|GO:0055114 G3DSA:3.40.50.300|MF_00533|PF00142|PIRSF000363|PR00091|PS00692|PS00746|SSF52540|TIGR01287 BKD09_RS43770 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006503|IPR006660|IPR012336 Arsenate reductase-like|Nitrogenase-associated protein|Thioredoxin-like fold G3DSA:3.40.30.10|PF03960|SSF52833|TIGR01616 BKD09_RS43775 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005618|IPR011250 Outer membrane protein, OmpW|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021|GO:0019867 G3DSA:2.40.160.20|PF03922|SSF56925 BKD09_RS43800 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021388 Bacteriophage 933W, L0084 PF11225 BKD09_RS43805 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007415 Nitrogenase MoFe maturation protein, NifZ GO:0009399 PF04319 BKD09_RS43810 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000385|IPR003731|IPR005980|IPR007197|IPR013785 Aldolase-type TIM barrel|Dinitrogenase iron-molybdenum cofactor biosynthesis|MoaA/nifB/pqqE, iron-sulphur binding, conserved site|Nitrogenase cofactor biosynthesis protein NifB|Radical SAM GO:0003824|GO:0009108|GO:0009399|GO:0046872|GO:0051536|GO:0051539 G3DSA:3.20.20.70|G3DSA:3.30.420.130|PF02579|PF04055|PS01305|SSF102114|SSF53146|TIGR01290 BKD09_RS43815 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009727|IPR024044 NifT/FixU|NifT/FixU barrel-like domain GO:0009399 G3DSA:2.40.50.240|PF06988|SSF159203|TIGR02934 BKD09_RS43820 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000192|IPR015421|IPR015422|IPR015424|IPR016454|IPR017772|IPR020578 Aminotransferase class V domain|Aminotransferase class-V, pyridoxal-phosphate binding site|Cysteine desulfurase|Cysteine desulfurase NifS, bacterial/archaeal|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0006520|GO:0030170|GO:0031071 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|PIRSF005572|PS00595|SSF53383|TIGR03402 BKD09_RS43825 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000361|IPR016092|IPR017870 FeS cluster biogenesis|FeS cluster insertion protein|FeS cluster insertion, C-terminal, conserved site GO:0005198|GO:0016226|GO:0051536 G3DSA:2.60.300.12|PF01521|PS01152|SSF89360|TIGR00049 BKD09_RS43835 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 G3DSA:2.102.10.10|PF00355|SSF50022 BKD09_RS43845 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014283|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|Ferredoxin III 4[4Fe-4S], nif-specific G3DSA:3.30.70.20|PF13484|PS00198|SSF54862|TIGR02936 BKD09_RS43850 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007774|IPR029012 Helix hairpin bin domain|Putative nitrogen fixation protein G3DSA:1.10.287.660|PF05082|PIRSF037676 BKD09_RS43855 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004952 Uncharacterised protein family UPF0460 PF03270|PIRSF005788|TIGR02935 BKD09_RS43860 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003731|IPR013480 Dinitrogenase iron-molybdenum cofactor biosynthesis|Nitrogen fixation protein NifX GO:0009399|GO:0051188|GO:0051540 G3DSA:3.30.420.130|PF02579|SSF53146|TIGR02663 BKD09_RS43865 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000318|IPR000510|IPR005975 Nitrogenase component 1, conserved site|Nitrogenase molybdenum-iron cofactor biosynthesis protein|Nitrogenase/oxidoreductase, component 1 GO:0006461|GO:0009399|GO:0016163|GO:0016491|GO:0055114 G3DSA:3.40.50.1980|PF00148|PS00699|SSF53807|TIGR01285 BKD09_RS43870 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000318|IPR000510|IPR005973|IPR007419 BFD-like [2Fe-2S]-binding domain|Nitrogenase MoFe cofactor biosynthesis protein NifE|Nitrogenase component 1, conserved site|Nitrogenase/oxidoreductase, component 1 GO:0006461|GO:0009399|GO:0016163|GO:0016491|GO:0055114 G3DSA:3.40.50.1980|PF00148|PF04324|PS00090|PS00699|SSF53807|TIGR01283 BKD09_RS43875 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000318|IPR000510|IPR005976|IPR024564 Nitrogenase component 1, conserved site|Nitrogenase molybdenum-iron protein beta chain|Nitrogenase molybdenum-iron protein beta chain, N-terminal|Nitrogenase/oxidoreductase, component 1 GO:0009399|GO:0016163|GO:0016491|GO:0016612|GO:0055114 G3DSA:3.40.50.1980|PF00148|PF11844|PS00090|PS00699|SSF53807|TIGR01286 BKD09_RS43880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000318|IPR000510|IPR005972|IPR010143 Nitrogenase component 1, alpha chain|Nitrogenase component 1, conserved site|Nitrogenase molybdenum-iron protein alpha chain|Nitrogenase/oxidoreductase, component 1 GO:0009399|GO:0016163|GO:0016491|GO:0016612|GO:0051536|GO:0055114 G3DSA:3.40.50.1980|PF00148|PS00090|PS00699|SSF53807|TIGR01282|TIGR01862 BKD09_RS43885 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002514|IPR009057|IPR010921 Homeodomain-like|Transposase IS3/IS911family|Trp repressor/replication initiator GO:0003677|GO:0004803|GO:0006313|GO:0043565 G3DSA:1.10.10.60|PF01527|SSF48295 BKD09_RS43895 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR012337 Homeodomain-like|Ribonuclease H-like domain GO:0003676|GO:0003677 G3DSA:1.10.10.60|G3DSA:3.30.420.10|PF13358|PF13565|SSF46689|SSF53098 BKD09_RS43900 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007698|IPR007886|IPR008141|IPR008143|IPR016040|IPR023753 Alanine dehydrogenase|Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal|Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain|Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2|FAD/NAD(P)-binding domain|NAD(P)-binding domain GO:0000286|GO:0016491|GO:0042853|GO:0055114 G3DSA:3.40.50.1770|G3DSA:3.50.50.60|PF01262|PF05222|PIRSF000183|PS00837|SM01002|SM01003|SSF51735|SSF52283|TIGR00518 BKD09_RS43905 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010918|IPR011854|IPR016188 AIR synthase-related protein, C-terminal domain|Hydrogenase expression/formation protein HypE|PurM-like, N-terminal domain G3DSA:3.30.1330.10|G3DSA:3.90.650.10|PF00586|PF02769|PIRSF005644|SSF55326|SSF56042|TIGR02124 BKD09_RS43910 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002780 Hydrogenase formation HypD protein GO:0046872 PF01924|PIRSF005622|TIGR00075 BKD09_RS43915 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001109|IPR001792|IPR006070|IPR017945|IPR017968 Acylphosphatase, conserved site|Acylphosphatase-like domain|DHBP synthase RibB-like alpha/beta domain|Hydrogenase expression/formation protein, HupF/HypC|YrdC-like domain GO:0003725 G3DSA:3.30.70.100|G3DSA:3.90.870.10|PF00708|PF01300|PF01455|PR00445|PS00150|SSF159127|SSF54975|SSF55821|TIGR00074 BKD09_RS43930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002514|IPR009057|IPR010921 Homeodomain-like|Transposase IS3/IS911family|Trp repressor/replication initiator GO:0003677|GO:0004803|GO:0006313|GO:0043565 G3DSA:1.10.10.60|PF01527|SSF48295 BKD09_RS43940 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 MF_00213|PF01155|PIRSF004761|TIGR00100 BKD09_RS43960 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001109 Hydrogenase expression/formation protein, HupF/HypC PF01455|PR00445|SSF159127|TIGR00074 BKD09_RS43970 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000516|IPR011577|IPR016174 Cytochrome b561, bacterial/Ni-hydrogenase|Di-haem cytochrome, transmembrane|Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020|GO:0016021|GO:0022904 G3DSA:1.20.950.20|PF01292|PR00161|PS00883|SSF81342|TIGR02125 BKD09_RS43975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001501|IPR018194|IPR029014 NiFe hydrogenase-like|Nickel-dependent hydrogenase, large subunit|Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 G3DSA:1.10.645.10|PF00374|PS00507|PS00508|SSF56762 BKD09_RS43980 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001821|IPR006137|IPR019546|IPR027394 Cytochrome-c3 hydrogenase, C-terminal|NADH:ubiquinone oxidoreductase-like, 20kDa subunit|Twin-arginine translocation pathway, signal sequence, bacterial/archaeal|[NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 G3DSA:3.40.50.700|G3DSA:4.10.480.10|PF01058|PF14720|PIRSF000310|PR00614|SSF56770|TIGR00391|TIGR01409 BKD09_RS43995 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001991|IPR018107|IPR023954 C4-dicarboxylate transport protein|Sodium:dicarboxylate symporter|Sodium:dicarboxylate symporter, conserved site GO:0006835|GO:0015293|GO:0016021 G3DSA:1.10.3860.10|MF_01300|PF00375|PR00173|PS00714|SSF118215 BKD09_RS44005 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025161 Putative transposase IS4/IS5 family PF13340 BKD09_RS44010 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012337 Ribonuclease H-like domain GO:0003676 G3DSA:3.30.420.10|PF13358|SSF53098 BKD09_RS44015 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR001610|IPR003594|IPR003661|IPR004358|IPR013655|IPR013767|IPR025201 Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold|PAS fold-3|Sensor protein KdpD, transmembrane domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0005515|GO:0006355|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.20.120.620|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF00989|PF02518|PF08447|PF13426|PF13493|PR00344|SM00086|SM00091|SM00387|SM00388|SSF47384|SSF55785|SSF55874|TIGR00229 BKD09_RS44020 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR001789|IPR011006|IPR011991 CheY-like superfamily|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PS00622|SM00421|SM00448|SSF52172 BKD09_RS44025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 BKD09_RS44030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 PF00872|PS01007 BKD09_RS44035 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 BKD09_RS44040 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002611|IPR003593|IPR013690|IPR027417|IPR028350 AAA+ ATPase domain|DNA replication protein DnaC/insertion sequence putative ATP-binding protein|IstB-like ATP binding N-terminal|IstB-like ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF01695|PF08483|PIRSF003073|SM00382|SSF52540 BKD09_RS44050 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003653 Ulp1 protease family, C-terminal catalytic domain GO:0006508|GO:0008234 G3DSA:3.30.310.130|PF02902|SSF54001 BKD09_RS44060 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032874 DDE domain PF13610 BKD09_RS44065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006119|IPR011109|IPR025827 DNA-binding recombinase domain|Recombinase zinc beta ribbon domain|Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 G3DSA:3.40.50.1390|PF00239|PF07508|PF13408|SM00857|SSF53041 BKD09_RS44070 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR012337 Homeodomain-like|Ribonuclease H-like domain GO:0003676|GO:0003677 G3DSA:1.10.10.60|G3DSA:3.30.420.10|PF13358|PF13565|SSF46689|SSF53098 BKD09_RS44080 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003688|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 G3DSA:3.40.50.300|PF02534|SSF52540 BKD09_RS44095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002514|IPR009057|IPR010921 Homeodomain-like|Transposase IS3/IS911family|Trp repressor/replication initiator GO:0003677|GO:0004803|GO:0006313|GO:0043565 G3DSA:1.10.10.60|PF01527|SSF48295 BKD09_RS44110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025161 Putative transposase IS4/IS5 family PF13340 BKD09_RS44120 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008893 WGR domain G3DSA:2.20.140.10|PF05406|SM00773|SSF142921 BKD09_RS44130 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003653 Ulp1 protease family, C-terminal catalytic domain GO:0006508|GO:0008234 G3DSA:3.30.310.130|PF02902|SSF54001 BKD09_RS44135 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002611|IPR013690|IPR027417 IstB-like ATP binding N-terminal|IstB-like ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF01695|PF08483|SSF52540 BKD09_RS44140 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001584|IPR011991|IPR012337|IPR013249 Integrase, catalytic core|RNA polymerase sigma factor 70, region 4 type 2|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0015074|GO:0016987 G3DSA:1.10.10.10|G3DSA:3.30.420.10|PF00665|PF08281|SSF53098 BKD09_RS44145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002514|IPR009057|IPR010921 Homeodomain-like|Transposase IS3/IS911family|Trp repressor/replication initiator GO:0003677|GO:0004803|GO:0006313|GO:0043565 G3DSA:1.10.10.60|PF01527|SSF48295 BKD09_RS44150 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR031848 PrlF antitoxin GO:0001558|GO:0003700|GO:0097351 G3DSA:2.10.260.10|PD030562|PF15937|SSF89447 BKD09_RS44155 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021679 Toxin endonuclease, YhaV PF11663 BKD09_RS44165 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005814|IPR015421|IPR015422|IPR015424 Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0008483|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00202|PIRSF000521|PS00600|SSF53383 BKD09_RS44175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032874 DDE domain PF13610 BKD09_RS44185 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018733 Protein of unknown function DUF2274 PF10038 BKD09_RS44190 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005498 Type IV secretion system, VirB10 / TraB / TrbI PF03743 BKD09_RS44205 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR010065 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR01726 BKD09_RS44210 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS44215 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010921 Trp repressor/replication initiator GO:0043565 SSF48295 BKD09_RS44225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003591|IPR029487|IPR032675 Leucine-rich repeat domain, L domain-like|Leucine-rich repeat, typical subtype|Novel E3 ligase domain GO:0004842|GO:0016567 G3DSA:1.20.1270.130|G3DSA:1.20.58.360|G3DSA:1.20.58.90|G3DSA:3.80.10.10|PF14496|SM00364|SM00369|SSF52058 BKD09_RS44245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009875 PilZ domain GO:0035438 PF07238|SSF141371 BKD09_RS44250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001242 Condensation domain PF00668|SSF52777 BKD09_RS44255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025668 Transposase DDE domain PF13701 BKD09_RS44275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009962 Protein of unknown function DUF1488 PF07369|SSF160272 BKD09_RS44285 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|Nucleotide cyclase GO:0009190|GO:0016849|GO:0035556 G3DSA:3.30.70.1230|PF00211|SSF55073 BKD09_RS44290 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|Nucleotide cyclase GO:0009190|GO:0016849|GO:0035556 G3DSA:3.30.70.1230|PF00211|SSF55073 BKD09_RS44295 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.1140.10|PF13555|SSF52540 BKD09_RS44300 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025449 Protein of unknown function DUF4194 PF13835 BKD09_RS44320 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|SSF53335 BKD09_RS44340 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002514|IPR002525|IPR003346|IPR009057 Homeodomain-like|Transposase IS3/IS911family|Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 G3DSA:1.10.10.60|PF01527|PF01548|PF02371|SSF46689 BKD09_RS44345 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013319|IPR013320 Concanavalin A-like lectin/glucanase domain|Glycoside hydrolase family 11/12 GO:0004553 G3DSA:2.60.120.180|SSF49899 BKD09_RS44350 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032874 DDE domain PF13610 BKD09_RS44355 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003738 SOS response associated peptidase (SRAP) SSF143081 BKD09_RS44365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011086 Domain of unknown function DUF1521 PF07481 BKD09_RS44370 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012337 Ribonuclease H-like domain GO:0003676 PF13546|SSF53098 BKD09_RS44390 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001633 EAL domain G3DSA:3.20.20.450|PF00563|SM00052|SSF141868 BKD09_RS44400 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001584|IPR011991|IPR012337|IPR013249 Integrase, catalytic core|RNA polymerase sigma factor 70, region 4 type 2|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0015074|GO:0016987 G3DSA:1.10.10.10|G3DSA:3.30.420.10|PF00665|PF08281|SSF53098 BKD09_RS44405 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002611|IPR013690|IPR027417 IstB-like ATP binding N-terminal|IstB-like ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF01695|PF08483|SSF52540 BKD09_RS44440 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 G3DSA:1.10.260.40 BKD09_RS44460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002104|IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|SSF56349 BKD09_RS44470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002059|IPR011129|IPR012156|IPR012340 Cold shock protein|Cold shock, CspA|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|SM00357|SSF50249 BKD09_RS44475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001347|IPR005855|IPR029055 Glucosamine-fructose-6-phosphate aminotransferase, isomerising|Nucleophile aminohydrolases, N-terminal|Sugar isomerase (SIS) GO:0004360|GO:0005975|GO:0030246|GO:1901137 G3DSA:3.40.50.10490|G3DSA:3.60.20.10|MF_00164|PF01380|PF13522|SSF53697|SSF56235|TIGR01135 BKD09_RS44480 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006368|IPR016040 GDP-mannose 4,6-dehydratase|NAD(P)-binding domain GO:0008446|GO:0019673 G3DSA:3.40.50.720|G3DSA:3.90.25.10|MF_00955|PF16363|SSF51735|TIGR01472 BKD09_RS44485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001509|IPR016040|IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase|NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0009226|GO:0016491|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|MF_00956|PF01370|SSF51735 BKD09_RS44490 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|G3DSA:3.30.70.1440|PF00873|PR00702|SSF82693|SSF82714|SSF82866 BKD09_RS44525 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018733 Protein of unknown function DUF2274 PF10038 BKD09_RS44530 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005498 Type IV secretion system, VirB10 / TraB / TrbI PF03743 BKD09_RS44535 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010258|IPR014142 Conjugal transfer, TrbG/VirB9/CagX|P-type conjugative transfer protein TrbG PF03524|TIGR02775 BKD09_RS44540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007430|IPR032710 Bacterial virulence protein VirB8|NTF2-like domain GO:0016020 PF04335|SSF54427 BKD09_RS44545 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007688|IPR014150 Conjugal transfer, TrbL|Plasmid conjugal transfer TrbL/VirB6 GO:0030255 PF04610|TIGR02783 BKD09_RS44555 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003115 ParB/Sulfiredoxin G3DSA:3.90.1530.10|PF02195|SM00470|SSF109709|SSF110849 BKD09_RS44560 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013610|IPR017113 Antirestriction, ArdC|Domain of unknown function DUF1738 PF08401|PIRSF037112 BKD09_RS44580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF02371 BKD09_RS44585 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000477|IPR013597 Group II intron, maturase-specific|Reverse transcriptase domain PF00078|PF08388|SSF56672 BKD09_RS44590 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 PF01402 BKD09_RS44595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006118|IPR006119|IPR011109|IPR025827 DNA-binding recombinase domain|Recombinase zinc beta ribbon domain|Recombinase, conserved site|Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 G3DSA:3.40.50.1390|PF00239|PF07508|PF13408|PS00397|SM00857|SSF53041 BKD09_RS44615 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540 BKD09_RS44620 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS44625 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PF00528|SSF161098 BKD09_RS44630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|SSF53850 BKD09_RS44635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011251|IPR016215 Luciferase-like domain|Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497|GO:0016705|GO:0055114 G3DSA:3.20.20.30|PF00296|PIRSF000337|SSF51679|TIGR03860 BKD09_RS44640 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|SM00345|SM00895|SSF46785|SSF48008 BKD09_RS44650 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR022037 Protein of unknown function DUF3606 PF12244 BKD09_RS44655 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012309|IPR012310|IPR012340|IPR014146 DNA ligase D, ligase domain|DNA ligase, ATP-dependent, C-terminal|DNA ligase, ATP-dependent, central|Nucleic acid-binding, OB-fold GO:0003910|GO:0005524|GO:0006281|GO:0006310 G3DSA:2.40.50.140|G3DSA:3.30.1490.70|G3DSA:3.30.470.30|PF01068|PF04679|SSF50249|SSF56091|TIGR02779 BKD09_RS44665 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002068|IPR008978 Alpha crystallin/Hsp20 domain|HSP20-like chaperone G3DSA:2.60.40.790|PF00011|SSF49764 BKD09_RS44675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012310|IPR016059 DNA ligase, ATP-dependent, central|DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0003910|GO:0005524|GO:0006281|GO:0006310|GO:0051103 G3DSA:3.30.1490.70|G3DSA:3.30.470.30|PF01068|PS00333|PS00697|SSF56091 BKD09_RS44685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012309|IPR012340 DNA ligase, ATP-dependent, C-terminal|Nucleic acid-binding, OB-fold GO:0003910|GO:0006281|GO:0006310 G3DSA:2.40.50.140|PF04679|SSF50249 BKD09_RS44690 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000979|IPR020935|IPR024654|IPR029052 Calcineurin-like phosphoesterase domain, lpxH type|Metallo-dependent phosphatase-like|Phosphodiesterase MJ0936/Vps29|Phosphodiesterase YfcE, conserved site G3DSA:3.60.21.10|PF12850|PS01269|SSF56300|TIGR00040 BKD09_RS44695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000086|IPR015797 NUDIX hydrolase domain|NUDIX hydrolase domain-like GO:0016787 G3DSA:3.90.79.10|PF00293|SSF55811 BKD09_RS44700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006164|IPR009187|IPR016194 Ku70/Ku80 beta-barrel domain|Non-homologous end joining protein Ku, prokaryotic type|SPOC-like, C-terminal domain GO:0003677|GO:0006303 G3DSA:2.40.290.10|MF_01875|PF02735|PIRSF006493|SM00559|SSF100939|TIGR02772 BKD09_RS44720 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008180|IPR029054 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase|dUTPase-like GO:0016787|GO:0046080 G3DSA:2.70.40.10|PF00692|SSF51283 BKD09_RS44725 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002582|IPR004568|IPR008278 4'-phosphopantetheinyl transferase superfamily|Holo-[acyl carrier protein] synthase|Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 G3DSA:3.90.470.20|MF_00101|PD004282|PF01648|SSF56214|TIGR00516|TIGR00556 BKD09_RS44730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core G3DSA:1.10.287.1080|PF03819|SSF101386 BKD09_RS44740 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain SSF55831 BKD09_RS44745 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010359 HTH domain, IrrE-type PF06114 BKD09_RS44750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413 BKD09_RS44760 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025159 Transcriptional regulator, AbiEi antitoxin PF13338 BKD09_RS44765 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system PF08843 BKD09_RS44805 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021327 Protein of unknown function DUF2934 PF11154 BKD09_RS44825 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006119|IPR011109|IPR025827 DNA-binding recombinase domain|Recombinase zinc beta ribbon domain|Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 G3DSA:3.40.50.1390|PF00239|PF07508|PF13408|SM00857|SSF53041 BKD09_RS44830 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|SSF56300 BKD09_RS44835 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003593|IPR004605|IPR008823|IPR008824|IPR011991|IPR027417 AAA+ ATPase domain|DNA helicase, Holliday junction RuvB type|DNA helicase, Holliday junction RuvB type, C-terminal|Holliday junction DNA helicase ruvB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 G3DSA:1.10.10.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00016|PD005323|PF05491|PF05496|SM00382|SSF46785|SSF52540|TIGR00635 BKD09_RS44845 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000085|IPR003583|IPR010994|IPR011114|IPR012340|IPR013849 Bacterial DNA recombination protein RuvA|DNA helicase, Holliday junction RuvA type, domain I, bacterial|DNA helicase, Holliday junction RuvA type, domain III, C-terminal|Helix-hairpin-helix DNA-binding motif, class 1|Nucleic acid-binding, OB-fold|RuvA domain 2-like GO:0003677|GO:0003678|GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 G3DSA:1.10.150.20|G3DSA:1.10.8.10|G3DSA:2.40.50.140|MF_00031|PF01330|PF07499|PF14520|SM00278|SSF46929|SSF47781|SSF50249|TIGR00084 BKD09_RS44850 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002176|IPR012337|IPR020563 Crossover junction endodeoxyribonuclease RuvC|Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site|Ribonuclease H-like domain GO:0003676|GO:0004520|GO:0006281|GO:0006310|GO:0008821 G3DSA:3.30.420.10|MF_00034|PF02075|PR00696|PS01321|SSF53098|TIGR00228 BKD09_RS44855 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002876|IPR017856|IPR026563|IPR026564|IPR029072 Integrase, N-terminal zinc-binding domain-like|Transcriptional regulator TACO1-like|Transcriptional regulator TACO1-like, domain 2|Transcriptional regulator TACO1-like, domain 3|YebC-like G3DSA:1.10.10.200|G3DSA:3.30.1270.10|G3DSA:3.30.70.980|MF_00693|PF01709|SSF75625|TIGR01033 BKD09_RS44860 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 G3DSA:1.10.287.950|PF00015|SM00283|SSF58104 BKD09_RS44865 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004089|IPR004090 Chemotaxis methyl-accepting receptor|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020 G3DSA:1.10.287.950|PF00015|PR00260|SM00283|SSF58104 BKD09_RS44870 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001041|IPR002888|IPR006058|IPR012675 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|[2Fe-2S]-binding GO:0009055|GO:0016491|GO:0046872|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.150.120|G3DSA:3.10.20.30|PF00111|PF01799|PS00197|SSF47741|SSF54292 BKD09_RS44875 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000674|IPR008274|IPR012368 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding|Oxidoreductase molybdopterin-binding subunit, IorB-related GO:0016491|GO:0055114 G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF02738|PIRSF036389|SM01008|SSF56003 BKD09_RS44880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008168|IPR009056|IPR014353 Cytochrome c, class IC|Cytochrome c-like domain|Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0009055|GO:0016020|GO:0016614|GO:0020037 G3DSA:1.10.760.10|PF00034|PF13442|PIRSF000018|PR00605|SSF46626 BKD09_RS44885 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 G3DSA:3.50.30.50|PF04199|SSF102198 BKD09_RS44890 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003495|IPR011629|IPR027417 CobW/HypB/UreG, nucleotide-binding domain|Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.30.1220.10|G3DSA:3.40.50.300|PF02492|PF07683|SM00833|SSF52540|SSF90002 BKD09_RS44895 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005235|IPR029052 Metallo-dependent phosphatase-like|Metallophosphoesterase, YmdB-like G3DSA:3.60.21.30|PF13277|PIRSF004789|SSF56300|TIGR00282 BKD09_RS44900 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002698|IPR024185 5-formyltetrahydrofolate cyclo-ligase|5-formyltetrahydrofolate cyclo-ligase-like domain G3DSA:3.40.50.10420|PF01812|PIRSF006806|SSF100950|TIGR02727 BKD09_RS44910 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007838 Cell division protein ZapA-like PF05164|SSF102829 BKD09_RS44915 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025310 Protein of unknown function DUF4164 PF13747 BKD09_RS44920 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005474|IPR005475|IPR005478|IPR009014|IPR020826|IPR029061|IPR033248 Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase binding site|Transketolase, C-terminal domain|Transketolase, N-terminal|Transketolase, bacterial-like|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0004802|GO:0008152 G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF00456|PF02779|PF02780|PS00801|PS00802|SM00861|SSF52518|SSF52922|TIGR00232 BKD09_RS44925 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006424|IPR016040|IPR020828|IPR020829|IPR020831 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain|Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain|Glyceraldehyde-3-phosphate dehydrogenase, type I|Glyceraldehyde/Erythrose phosphate dehydrogenase family|NAD(P)-binding domain GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF00044|PF02800|PIRSF000149|PR00078|SM00846|SSF51735|SSF55347|TIGR01534 BKD09_RS44930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001576|IPR015824|IPR015901|IPR015911 Phosphoglycerate kinase|Phosphoglycerate kinase, C-terminal|Phosphoglycerate kinase, N-terminal|Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 G3DSA:3.40.50.1260|G3DSA:3.40.50.1270|MF_00145|PF00162|PIRSF000724|PR00477|PS00111|SSF53748 BKD09_RS44935 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000771|IPR006412|IPR013785 Aldolase-type TIM barrel|Fructose-bisphosphate aldolase, class II, Calvin cycle subtype|Ketose-bisphosphate aldolase, class-II GO:0003824|GO:0004332|GO:0005975|GO:0006096|GO:0008270|GO:0016832 G3DSA:3.20.20.70|PF01116|PIRSF001359|PS00602|PS00806|SSF51569|TIGR00167|TIGR01521 BKD09_RS44940 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000741|IPR013785 Aldolase-type TIM barrel|Fructose-bisphosphate aldolase, class-I GO:0003824|GO:0004332|GO:0006096 G3DSA:3.20.20.70|PF00274|SSF51569 BKD09_RS44945 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003733|IPR013785|IPR022998 Aldolase-type TIM barrel|Thiamin phosphate synthase superfamily|Thiamine phosphate synthase GO:0003824|GO:0004789|GO:0009228 G3DSA:3.20.20.70|PF02581|SSF51391 BKD09_RS44950 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006597|IPR011990 Sel1-like repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF08238|SM00671|SSF81901 BKD09_RS44955 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000760|IPR020550|IPR020583|IPR022337 Inositol monophosphatase|Inositol monophosphatase, SuhB|Inositol monophosphatase, conserved site|Inositol monophosphatase, metal-binding site GO:0008934|GO:0046854|GO:0046855 G3DSA:3.30.540.10|G3DSA:3.40.190.80|PF00459|PR00377|PR01959|PS00629|PS00630|SSF56655 BKD09_RS44960 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001036|IPR004764|IPR027463 Acriflavin resistance protein|Hydrophobe/amphiphile efflux-1 HAE1|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|SSF82693|SSF82714|SSF82866|TIGR00915 BKD09_RS44965 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF00529|PF16576|SSF111369|TIGR01730 BKD09_RS44970 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005546|IPR006315|IPR011050|IPR012332|IPR013425|IPR030895 Autotransporter beta-domain|Autotransporter-associated beta strand repeat|Outer membrane autotransporter barrel|P22 tailspike C-terminal domain-like|Pectin lyase fold/virulence factor|T5SS/PEP-CTERM-associated repeat GO:0019867 G3DSA:2.160.20.20|G3DSA:2.40.128.130|PF03797|PF12951|SM00869|SSF103515|SSF51126|TIGR01414|TIGR02601|TIGR04393 BKD09_RS44975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF02353|SSF53335 BKD09_RS44990 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006665 OmpA-like domain G3DSA:3.30.1330.60|PF00691|SSF103088 BKD09_RS44995 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13673|SSF55729 BKD09_RS45000 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR011527|IPR011918|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, ATP-binding/permease protein|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|SM00382|SSF52540|SSF90123|TIGR02204 BKD09_RS45005 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002150|IPR027491 Ribosomal protein L31|Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00501|PF01197|PR01249|PS01143|SSF143800|TIGR00105 BKD09_RS45010 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010848 Protein of unknown function DUF1465 PF07323 BKD09_RS45015 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009579 Protein of unknown function DUF1192 PF06698 BKD09_RS45020 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009080|IPR014729|IPR014758|IPR015413|IPR023458|IPR029038 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding|Methionine-tRNA ligase, type 1|Methionyl-tRNA synthetase|Methionyl-tRNA synthetase, Zn-domain|Methionyl/Leucyl tRNA synthetase|Rossmann-like alpha/beta/alpha sandwich fold GO:0000166|GO:0004812|GO:0004825|GO:0005524|GO:0005737|GO:0006418|GO:0006431 G3DSA:1.10.730.10|G3DSA:2.20.28.20|G3DSA:3.40.50.620|MF_00098|PF09334|PR01041|SSF47323|SSF52374|SSF57770|TIGR00398 BKD09_RS45025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011032|IPR013149|IPR013154|IPR014189|IPR016040|IPR020843 Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain|Quinone oxidoreductase PIG3 GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|SM00829|SSF50129|SSF51735|TIGR02824 BKD09_RS45030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR000160|IPR001610|IPR001633|IPR011622|IPR013655|IPR029787 7TM-DISM receptor, extracellular domain, type 2|EAL domain|GGDEF domain|Nucleotide cyclase|PAC motif|PAS domain|PAS fold-3 GO:0005515 G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00563|PF00990|PF07696|PF08447|SM00052|SM00086|SM00091|SM00267|SSF141868|SSF55073|SSF55785|TIGR00229|TIGR00254 BKD09_RS45045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000160|IPR029787|IPR033479 Double Cache domain 1|GGDEF domain|Nucleotide cyclase G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00990|PF02743|SM00267|SSF55073|TIGR00254 BKD09_RS45050 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005771|IPR005835|IPR029044 Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain|UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011|GO:0009058|GO:0016779 G3DSA:3.90.550.10|PF00483|SSF53448|TIGR01099 BKD09_RS45055 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002477|IPR011970|IPR023346|IPR031304 Lysozyme-like domain|Lytic murein transglycosylase|Peptidoglycan binding-like|Transglycosylase SLT domain 2 G3DSA:1.10.101.10|G3DSA:1.10.530.10|PF01471|PF13406|SSF47090|SSF53955|TIGR02283 BKD09_RS45060 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007407|IPR013830 Protein of unknown function DUF459|SGNH hydrolase-type esterase domain G3DSA:3.40.50.1110|PF04311|SSF52266 BKD09_RS45065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008462 CsbD-like G3DSA:1.10.1470.10|PF05532|SSF69047 BKD09_RS45070 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00081|PS00061|SSF51735 BKD09_RS45075 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SSF51735 BKD09_RS45080 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 G3DSA:3.60.130.10|PF02668|SSF51197 BKD09_RS45085 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003774 Protein of unknown function UPF0301 G3DSA:3.30.70.1300|G3DSA:3.40.1740.10|MF_00758|PF02622|SSF143456 BKD09_RS45090 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain PF11412 BKD09_RS45095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002797|IPR029303 Polysaccharide biosynthesis protein|Polysaccharide biosynthesis protein, C-terminal domain GO:0016020 PF01943|PF14667 BKD09_RS45100 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925 BKD09_RS45105 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR011294|IPR016040|IPR020904 3-hydroxybutyrate dehydrogenase|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0003858|GO:0016491|GO:0055114 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SSF51735|TIGR01963 BKD09_RS45110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002641|IPR016035|IPR021095 Acyl transferase/acyl hydrolase/lysophospholipase|Patatin/Phospholipase A2-related|Protein of unknown function DUF3734 GO:0006629|GO:0008152 G3DSA:3.40.1090.10|PF01734|PF12536|SSF52151 BKD09_RS45115 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014044 CAP domain G3DSA:3.40.33.10|PF00188|SSF55797 BKD09_RS45120 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR005666|IPR008995|IPR017871|IPR024765|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Sulphate transport system permease protein 1|TOBE-like domain GO:0005524|GO:0006810|GO:0016020|GO:0016887|GO:0042626 G3DSA:3.40.50.300|PF00005|PF12857|PS00211|SM00382|SSF50331|SSF52540|TIGR00968 BKD09_RS45125 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR005667|IPR011866 ABC transporter type 1, transmembrane domain MetI-like|Sulphate ABC transporter permease protein 2|Sulphate ABC transporter, permease protein CysW GO:0006810|GO:0008272|GO:0015116|GO:0015419|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR00969|TIGR02140 BKD09_RS45130 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR005667|IPR011865 ABC transporter type 1, transmembrane domain MetI-like|Sulphate ABC transporter permease protein 2|Sulphate ABC transporter, permease protein CysT GO:0006810|GO:0008272|GO:0015116|GO:0015419|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR00969|TIGR02139 BKD09_RS45135 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000957|IPR005669 Sulphate/thiosulphate-binding, conserved site|Thiosulphate/Sulfate-binding protein GO:0008271|GO:0008272|GO:0015419|GO:0030288 G3DSA:3.40.190.10|PF13531|PS00757|SSF53850|TIGR00971 BKD09_RS45140 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002500|IPR004511|IPR014729 Phosphoadenosine phosphosulphate reductase|Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0004604|GO:0008152|GO:0019379|GO:0055114 G3DSA:3.40.50.620|PF01507|PIRSF000857|SSF52402 BKD09_RS45145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008318 Uncharacterised conserved protein UCP030820 PF06073|PIRSF030820 BKD09_RS45150 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005117|IPR006067 Nitrite/Sulfite reductase ferredoxin-like domain|Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 G3DSA:3.30.413.10|G3DSA:3.90.480.10|PF01077|PF03460|SSF55124|SSF56014 BKD09_RS45155 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021270 Protein of unknown function DUF2849 PF11011 BKD09_RS45160 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000878|IPR003043|IPR006366|IPR006367|IPR012409|IPR014776|IPR014777|IPR016040|IPR019478 NAD(P)-binding domain|Sirohaem synthase|Sirohaem synthase, N-terminal|Sirohaem synthase, dimerisation domain|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2|Uroporphiryn-III C-methyltransferase, conserved site|Uroporphyrin-III C-methyltransferase GO:0004851|GO:0006779|GO:0008152|GO:0008168|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 G3DSA:1.10.8.210|G3DSA:3.30.160.110|G3DSA:3.30.950.10|G3DSA:3.40.1010.10|G3DSA:3.40.50.720|PF00590|PF10414|PF13241|PIRSF036426|PS00839|PS00840|SSF51735|SSF53790|SSF75615|TIGR01469|TIGR01470 BKD09_RS45165 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002500|IPR014729 Phosphoadenosine phosphosulphate reductase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0008152 G3DSA:3.40.50.620|PF01507|SSF52402 BKD09_RS45170 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000795|IPR002891|IPR009000|IPR009001|IPR011779|IPR027417|IPR031157 Adenylyl-sulfate kinase|P-loop containing nucleoside triphosphate hydrolase|Sulphate adenylyltransferase, large subunit|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal|Translation protein, beta-barrel domain GO:0000103|GO:0003924|GO:0004020|GO:0005524|GO:0005525|GO:0006790 G3DSA:2.40.30.10|G3DSA:3.40.50.300|MF_00065|PF00009|PF01583|PR00315|PS00301|SSF50447|SSF50465|SSF52540|TIGR00455|TIGR02034 BKD09_RS45175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001465|IPR006253|IPR011076|IPR023310 Malate synthase|Malate synthase G|Malate synthase G, beta sub-domain|Malate synthase-like GO:0003824|GO:0004474|GO:0006097 G3DSA:1.10.1860.10|G3DSA:1.20.1220.12|G3DSA:2.170.170.11|G3DSA:3.20.20.360|MF_00641|PF01274|SSF51645|TIGR01345 BKD09_RS45180 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003660|IPR004089|IPR004090 Chemotaxis methyl-accepting receptor|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PR00260|SM00283|SM00304|SSF58104 BKD09_RS45185 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021293 Protein of unknown function DUF2865 PF11064 BKD09_RS45190 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005490 L,D-transpeptidase catalytic domain GO:0016740 G3DSA:2.40.440.10|PF03734|SSF141523 BKD09_RS45195 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002549 Transmembrane protein TqsA-like PF01594 BKD09_RS45200 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010279 Protein of unknown function DUF883, ElaB PF05957|SSF58113 BKD09_RS45210 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014550 Uncharacterised conserved protein UCP028704, OpgC PF10129|PIRSF028704 BKD09_RS45215 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PF16859|PR00455|SSF46689|SSF48498 BKD09_RS45220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006189|IPR011102 CHASE domain|Signal transduction histidine kinase, HWE region GO:0004673 PF03924|PF07536|SM00911|SM01079 BKD09_RS45225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003495|IPR004400|IPR027417 CobW/HypB/UreG, nucleotide-binding domain|P-loop containing nucleoside triphosphate hydrolase|Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 G3DSA:3.40.50.300|MF_01389|PF02492|PIRSF005624|SSF52540|TIGR00101 BKD09_RS45230 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 MF_01385|PF01730|PIRSF009467 BKD09_RS45235 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004029|IPR007864|IPR012406 UreE urease accessory, N-terminal|Urease accessory protein UreE|Urease accessory protein UreE, C-terminal domain GO:0005737|GO:0006457|GO:0006461|GO:0016151|GO:0018307|GO:0019627 G3DSA:2.60.260.20|G3DSA:3.30.70.790|MF_00822|PF02814|PF05194|SM00988|SSF69287|SSF69737 BKD09_RS45240 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007138|IPR011008 Antibiotic biosynthesis monooxygenase domain|Dimeric alpha-beta barrel G3DSA:3.30.70.900|PF03992|SSF54909 BKD09_RS45245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005848|IPR006680|IPR011059|IPR011612|IPR017950|IPR029754|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain|Urease active site|Urease alpha-subunit, N-terminal domain|Urease nickel binding site|Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151|GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|MF_01953|PF00449|PF01979|PR01752|PS00145|PS01120|SSF51338|SSF51556|TIGR01792 BKD09_RS45250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003607 HD/PDEase domain PF13328|SM00471|SSF109604 BKD09_RS45255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002019 Urease, beta subunit G3DSA:2.10.150.10|MF_01954|PF00699|SSF51278|TIGR00192 BKD09_RS45260 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002026|IPR012010 Urease, gamma subunit|Urease, gamma/gamma-beta subunit GO:0009039|GO:0016151|GO:0019627|GO:0043419 G3DSA:3.30.280.10|MF_00739|PD002319|PF00547|PIRSF001223|SSF54111|TIGR00193 BKD09_RS45265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 MF_01384|PF01774 BKD09_RS45270 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017780|IPR027417 AAA+ ATPase domain|ABC transporter, urea, ATP-binding protein, UrtE|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|SM00382|SSF52540|TIGR03410 BKD09_RS45275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017781|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter, urea, ATP-binding protein, UrtD|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|SM00382|SSF52540|TIGR03411 BKD09_RS45280 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851|IPR017778 ABC transporter, permease|ABC transporter, urea, permease protein, UrtC GO:0005215|GO:0006810|GO:0016020 PF02653|TIGR03408 BKD09_RS45285 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851|IPR011989|IPR017779 ABC transporter, permease|ABC transporter, urea permease protein UrtB, bacterial-type|Armadillo-like helical GO:0005215|GO:0006810|GO:0016020 G3DSA:1.25.10.10|PF02653|TIGR03409 BKD09_RS45290 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR017777|IPR028082 ABC transporter, urea, substrate-binding, UrtA|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13433|SSF53822|TIGR03407 BKD09_RS45295 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000629|IPR001650|IPR011545|IPR014001|IPR027417 ATP-dependent RNA helicase DEAD-box, conserved site|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0005524 G3DSA:3.40.50.300|PF00270|PF00271|PS00039|SM00487|SM00490|SSF52540 BKD09_RS45300 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004368|IPR006196|IPR012340|IPR022967 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|RNA-binding domain, S1, IF1 type|Translation initiation factor IF-1 GO:0003723|GO:0003743|GO:0006413 G3DSA:2.40.50.140|MF_00075|PF01176|SM00316|SSF50249|TIGR00008 BKD09_RS45305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002059|IPR011129|IPR012156|IPR012340|IPR019844 Cold shock protein|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|SM00357|SSF50249 BKD09_RS45310 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032789 Pilus formation protein, N-terminal PF13629 BKD09_RS45315 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 PF04116 BKD09_RS45320 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007047 Flp/Fap pilin component PF04964 BKD09_RS45325 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 PF01478 BKD09_RS45330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013974|IPR017592|IPR031571 Flp pilus assembly protein RcpC/CpaB domain|Pilus assembly, Flp-type CpaB|SAF domain PF08666|PF16976|SM00858|TIGR03177 BKD09_RS45335 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001775|IPR004846|IPR007055|IPR032789 BON domain|GspD/PilQ family|Pilus formation protein, N-terminal|Type II/III secretion system GO:0009306 PF00263|PF04972|PF13629|PR00811 BKD09_RS45340 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013361|IPR019027 Pilus biogenesis CpaD|Pilus biogenesis CpaD-related PF09476|TIGR02522 BKD09_RS45345 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025669|IPR027417 AAA domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13614|SSF52540 BKD09_RS45350 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001482|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Type II secretion system protein E GO:0005524|GO:0006810 G3DSA:3.30.450.90|G3DSA:3.40.50.300|PF00437|SSF52540 BKD09_RS45355 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018076 Type II secretion system F domain PF00482 BKD09_RS45360 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018076 Type II secretion system F domain PF00482 BKD09_RS45365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011990|IPR014596|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain|Uncharacterised conserved protein UCP035836 GO:0005515 G3DSA:1.25.40.10|PF13432|PF14559|PIRSF035836|SM00028|SSF48452 BKD09_RS45370 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|SSF56300 BKD09_RS45380 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000819|IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B|Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0005737|GO:0006508|GO:0008235|GO:0019538|GO:0030145 G3DSA:3.40.630.10|PF00883|PR00481|PS00631|SSF53187 BKD09_RS45385 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000064|IPR001452 Endopeptidase, NLPC/P60 domain|SH3 domain GO:0005515 G3DSA:2.30.30.40|G3DSA:3.90.1720.10|PF00877|SSF50044|SSF54001 BKD09_RS45390 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540 BKD09_RS45395 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR025966 ABC transporter type 1, transmembrane domain MetI-like|Oligopeptide transport permease C-like, N-terminal domain GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PF12911|SSF161098 BKD09_RS45400 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS45405 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|SSF53850 BKD09_RS45410 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|SSF53850 BKD09_RS45415 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002327|IPR009056 Cytochrome c, class IA/ IB|Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF00034|PR00604|SSF46626 BKD09_RS45420 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003329|IPR004528|IPR029044 3-deoxy-D-manno-octulosonate cytidylyltransferase|Acylneuraminate cytidylyltransferase|Nucleotide-diphospho-sugar transferases GO:0005737|GO:0008690 G3DSA:3.90.550.10|MF_00057|PF02348|SSF53448|TIGR00466 BKD09_RS45425 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001086|IPR008242|IPR018528 Bifunctional P-protein, chorismate mutase/prephenate dehydratase|Prephenate dehydratase|Prephenate dehydratase, conserved site GO:0004106|GO:0004664|GO:0005737|GO:0009094 G3DSA:3.30.70.260|G3DSA:3.40.190.10|PF00800|PIRSF001500|PS00857|SSF53850|SSF55021 BKD09_RS45430 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011251|IPR019949 Luciferase family oxidoreductase, group 1|Luciferase-like domain GO:0016705|GO:0055114 G3DSA:3.20.20.30|PF00296|SSF51679|TIGR03558 BKD09_RS45435 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003171|IPR004620|IPR029041 5,10-methylenetetrahydrofolate reductase|FAD-linked oxidoreductase-like|Methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0006555|GO:0009086|GO:0055114 G3DSA:3.20.20.220|PF02219|SSF51730|TIGR00676 BKD09_RS45440 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000489|IPR003726|IPR003759|IPR004223|IPR006158|IPR011005|IPR011822 Cobalamin (vitamin B12)-binding domain|Cobalamin (vitamin B12)-binding module, cap domain|Cobalamin-dependent methionine synthase|Dihydropteroate synthase-like|Homocysteine-binding domain|Pterin-binding domain|Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419|GO:0042558|GO:0044237|GO:0046872 G3DSA:1.10.1240.10|G3DSA:3.10.196.10|G3DSA:3.20.20.20|G3DSA:3.20.20.330|G3DSA:3.40.50.280|PF00809|PF02310|PF02574|PF02607|PF02965|PIRSF000381|SM01018|SSF47644|SSF51717|SSF52242|SSF56507|SSF82282|TIGR02082 BKD09_RS45450 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004045|IPR010987|IPR012336 Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF13410|PF13417|SSF47616|SSF52833 BKD09_RS45470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 BKD09_RS45475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002692|IPR014395|IPR023343|IPR029055 Nucleophile aminohydrolases, N-terminal|Penicillin acylase|Penicillin amidase type, domain1|Penicillin/cephalosporin acylase GO:0016787|GO:0016811|GO:0017000 G3DSA:1.10.439.10|G3DSA:2.30.120.10|G3DSA:3.60.20.10|PF01804|PIRSF001227|SSF56235 BKD09_RS45480 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000577|IPR005999|IPR018483|IPR018484|IPR018485 Carbohydrate kinase, FGGY|Carbohydrate kinase, FGGY, C-terminal|Carbohydrate kinase, FGGY, N-terminal|Carbohydrate kinase, FGGY, conserved site|Glycerol kinase GO:0004370|GO:0005975|GO:0006072|GO:0016773 G3DSA:3.30.420.40|MF_00186|PF00370|PF02782|PIRSF000538|PS00445|PS00933|SSF53067|TIGR01311 BKD09_RS45485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371 BKD09_RS45490 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SM00822|SSF51735 BKD09_RS45495 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006091|IPR009075|IPR009100|IPR013786|IPR017616 Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain|Pimeloyl-CoA dehydrogenase, small subunit GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|SSF47203|SSF56645|TIGR03203 BKD09_RS45500 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006091|IPR009075|IPR009100|IPR013786|IPR017617 Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain|Pimeloyl-CoA dehydrogenase, large subunit GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|SSF47203|SSF56645|TIGR03204 BKD09_RS45505 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002155|IPR016039|IPR020610|IPR020613|IPR020616|IPR020617 Thiolase|Thiolase, C-terminal|Thiolase, N-terminal|Thiolase, active site|Thiolase, conserved site|Thiolase-like GO:0003824|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00108|PF02803|PIRSF000429|PS00099|PS00737|SSF53901|TIGR01930 BKD09_RS45510 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR017618|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase|Dicarboxylate-CoA ligase PimA GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801|TIGR03205 BKD09_RS45515 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001753|IPR006108|IPR006176|IPR008927|IPR013328|IPR016040|IPR018376|IPR029045 3-hydroxyacyl-CoA dehydrogenase, C-terminal|3-hydroxyacyl-CoA dehydrogenase, NAD binding|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|ClpP/crotonase-like domain|Crotonase superfamily|Enoyl-CoA hydratase/isomerase, conserved site|NAD(P)-binding domain GO:0003824|GO:0003857|GO:0006631|GO:0008152|GO:0016491|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|G3DSA:3.90.226.10|PF00378|PF00725|PF02737|PS00166|SSF48179|SSF51735|SSF52096 BKD09_RS45520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|SM00346|SSF46785|SSF55781 BKD09_RS45525 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|SM00382|SSF52540 BKD09_RS45530 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS45535 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS45540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS45545 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS45550 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS45555 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS45560 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007835|IPR025286 MOFRL domain|MOFRL-associated domain G3DSA:3.40.1480.10|G3DSA:3.40.50.10180|PF05161|PF13660|SSF82544 BKD09_RS45565 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PR00598|SM00347|SSF46785 BKD09_RS45570 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS45575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851|IPR003439|IPR003593|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter, permease|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005215|GO:0005524|GO:0006810|GO:0016020|GO:0016887 G3DSA:3.40.50.300|PF00005|PF02653|PF12399|SM00382|SSF52540 BKD09_RS45580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS45585 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011576|IPR012349 FMN-binding split barrel|Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF01243|SSF50475 BKD09_RS45590 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 BKD09_RS45595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003736|IPR006683|IPR029069 HotDog domain|Phenylacetic acid degradation-related domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|SSF54637|TIGR00369 BKD09_RS45600 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002938|IPR012733|IPR016040|IPR023753 4-hydroxybenzoate 3-monooxygenase|FAD-binding domain|FAD/NAD(P)-binding domain|NAD(P)-binding domain GO:0016491|GO:0018659|GO:0043639|GO:0050660|GO:0055114|GO:0071949 G3DSA:3.30.9.10|G3DSA:3.40.50.720|PF01494|PR00420|SSF51905|SSF54373|TIGR02360 BKD09_RS45605 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PF03480 BKD09_RS45610 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290 BKD09_RS45615 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004681|IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein GO:0016021 PF06808|PIRSF006066|TIGR00786 BKD09_RS45620 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011250|IPR020915 Outer membrane protein/outer membrane enzyme PagP, beta-barrel|Uncharacterised protein family UPF0311 GO:0016021 G3DSA:2.40.160.20|MF_00775|PF11578 BKD09_RS45625 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001753|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|SSF52096 BKD09_RS45630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR020845 AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.40.50.980|PF00501|PS00455|SSF56801 BKD09_RS45635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|SSF51735 BKD09_RS45640 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006683|IPR029069 HotDog domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|SSF54637 BKD09_RS45645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS45650 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010987|IPR012336|IPR033468 Glutathione S-transferase, C-terminal-like|Metaxin, glutathione S-transferase domain|Thioredoxin-like fold G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF17171|PF17172|SSF47616|SSF52833 BKD09_RS45660 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011991|IPR013196|IPR026881 Helix-turn-helix, type 11|WYL domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF08279|PF13280|SSF46785 BKD09_RS45665 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005358 Putative zinc- or iron-chelating domain containing protein PF03692 BKD09_RS45675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021737 Bacteriophage phiKZ, Orf197 PF11750 BKD09_RS45680 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011852 TRAP transporter solute receptor, TAXI family G3DSA:3.40.190.10|PF16868|SSF53850 BKD09_RS45690 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000595|IPR005821|IPR014710|IPR018488|IPR018490|IPR028325 Cyclic nucleotide-binding domain|Cyclic nucleotide-binding, conserved site|Cyclic nucleotide-binding-like|Ion transport domain|RmlC-like jelly roll fold|Voltage-gated potassium channel GO:0005216|GO:0005249|GO:0006811|GO:0006813|GO:0008076|GO:0016020|GO:0055085 G3DSA:1.10.287.70|G3DSA:2.60.120.10|PF00027|PF00520|PR00169|PS00888|SM00100|SSF51206|SSF81324 BKD09_RS45695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001753|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|SSF52096 BKD09_RS45705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004045|IPR010987|IPR012336 Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF02798|PF13410|SSF47616|SSF52833 BKD09_RS45710 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011991|IPR013196|IPR026881 Helix-turn-helix, type 11|WYL domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF08279|PF13280|SSF46785 BKD09_RS45720 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005804 Fatty acid desaturase domain GO:0006629 PF00487 BKD09_RS45725 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR008220|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 G3DSA:3.40.50.1820|PF00561|PIRSF000443|SSF53474 BKD09_RS45730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279|IPR004039 Metallo-beta-lactamase|Rubredoxin-type fold G3DSA:2.20.28.10|G3DSA:3.60.15.10|SM00849|SSF56281 BKD09_RS45735 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR018060|IPR018062|IPR020449 DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PR00032|PS00041|SM00342|SSF46689 BKD09_RS45740 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|SM00829|SSF50129|SSF51735 BKD09_RS45745 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801 BKD09_RS45750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|SM00345|SM00895|SSF46785|SSF48008 BKD09_RS45755 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS45760 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003313|IPR009057|IPR018060|IPR020449 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|Homeodomain-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PF14525|PR00032|SM00342|SSF46689 BKD09_RS45765 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801 BKD09_RS45770 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS45775 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025997|IPR028082 Periplasmic binding protein|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13407|SSF53822 BKD09_RS45780 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851|IPR011042|IPR018119 ABC transporter, permease|Six-bladed beta-propeller, TolB-like|Strictosidine synthase, conserved region GO:0005215|GO:0006810|GO:0009058|GO:0016020|GO:0016844 G3DSA:2.120.10.30|PF02653|PF03088|SSF63829 BKD09_RS45785 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011042|IPR018119 Six-bladed beta-propeller, TolB-like|Strictosidine synthase, conserved region GO:0009058|GO:0016844 G3DSA:2.120.10.30|PF03088|SSF63829 BKD09_RS45790 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS45795 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018637 Domain of unknown function DUF2059 PF09832 BKD09_RS45800 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014550 Uncharacterised conserved protein UCP028704, OpgC PF10129|PIRSF028704 BKD09_RS45805 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR011990|IPR027417|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|Nucleotide cyclase|P-loop containing nucleoside triphosphate hydrolase|Tetratricopeptide-like helical domain GO:0005515|GO:0009190|GO:0016849|GO:0035556 G3DSA:1.25.40.10|G3DSA:3.30.70.1230|G3DSA:3.40.50.300|PF00211|PF13191|SM00044|SSF48452|SSF52540|SSF55073 BKD09_RS45815 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016071 Staphylococcal nuclease (SNase-like), OB-fold G3DSA:2.40.50.90|PF00565|SM00318|SSF50199 BKD09_RS45820 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002227|IPR008922 Tyrosinase copper-binding domain|Uncharacterised domain, di-copper centre GO:0008152|GO:0016491 G3DSA:1.10.1280.10|PF00264|PR00092|PS00497|PS00498|SSF48056 BKD09_RS45825 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018688 Protein of unknown function DUF2182, transmembrane, metal-binding PF09948 BKD09_RS45835 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002701|IPR010951|IPR020822 Chorismate mutase|Chorismate mutase, bacteria|Chorismate mutase, type II GO:0046417 G3DSA:1.20.59.10|PF01817|SM00830|SSF48600|TIGR01795 BKD09_RS45840 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003495|IPR004400|IPR027417 CobW/HypB/UreG, nucleotide-binding domain|P-loop containing nucleoside triphosphate hydrolase|Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 G3DSA:3.40.50.300|MF_01389|PF02492|PIRSF005624|SSF52540|TIGR00101 BKD09_RS45845 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 MF_01385|PF01730|PIRSF009467 BKD09_RS45850 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005848|IPR006680|IPR011059|IPR011612|IPR017950|IPR029754|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain|Urease active site|Urease alpha-subunit, N-terminal domain|Urease nickel binding site|Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151|GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|MF_01953|PF00449|PF01979|PR01752|PS00145|PS01120|SSF51338|SSF51556|TIGR01792 BKD09_RS45855 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002019 Urease, beta subunit G3DSA:2.10.150.10|MF_01954|PF00699|SSF51278|TIGR00192 BKD09_RS45860 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein PF04955|PIRSF016919 BKD09_RS45865 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002026|IPR012010 Urease, gamma subunit|Urease, gamma/gamma-beta subunit GO:0009039|GO:0016151|GO:0019627|GO:0043419 G3DSA:3.30.280.10|MF_00739|PD002319|PF00547|PIRSF001223|SSF54111|TIGR00193 BKD09_RS45870 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 MF_01384|PF01774 BKD09_RS45875 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011044|IPR015943|IPR019405 Lactonase, 7-bladed beta propeller|Quinoprotein amine dehydrogenase, beta chain-like|WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.130.10.10|PF10282|SSF50969 BKD09_RS45880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032033 Cytochrome P460 PF16694 BKD09_RS45885 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032033 Cytochrome P460 PF16694 BKD09_RS45890 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR020556|IPR023631 Amidase signature domain|Amidase, conserved site G3DSA:3.90.1300.10|PF01425|PS00571|SSF75304 BKD09_RS45895 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 G3DSA:3.90.420.10|PF00174|SSF56524 BKD09_RS45900 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001433|IPR001709|IPR001834|IPR008333|IPR017938 Flavoprotein pyridine nucleotide cytochrome reductase|NADH:cytochrome b5 reductase (CBR)|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.40.50.80|PF00175|PF00970|PR00371|PR00406|SSF52343|SSF63380 BKD09_RS45915 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018988|IPR023476 Peptidyl-tRNA hydrolase II domain|Protein of unknown function DUF2000 G3DSA:3.40.1490.10|PF09391|SSF102462 BKD09_RS45920 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00081|SSF51735 BKD09_RS45925 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011032|IPR013149|IPR016040|IPR020843 Alcohol dehydrogenase, C-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|SM00829|SSF50129|SSF51735 BKD09_RS45930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR000639|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Epoxide hydrolase-like GO:0003824 G3DSA:3.40.50.1820|PF00561|PR00111|PR00412|SSF53474 BKD09_RS45935 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR018060|IPR018062|IPR020449 DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PR00032|PS00041|SM00342|SSF46689 BKD09_RS45940 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PS00622|SM00421|SM00448|SSF46894|SSF52172 BKD09_RS45945 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR003018|IPR003594|IPR003661|IPR004358|IPR013655|IPR029016 GAF domain|GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold-3|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0005515|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.450.40|G3DSA:3.30.565.10|PF00512|PF02518|PF08447|PR00344|SM00065|SM00387|SM00388|SSF47384|SSF55781|SSF55785|SSF55874 BKD09_RS45955 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007339|IPR016865 Protein of unknown function DUF417|Uncharacterised conserved protein UCP028065, membrane PF04224|PIRSF028065 BKD09_RS45960 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 PF07536|SM00911 BKD09_RS45970 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR017804|IPR019257|IPR029063 Histidine-specific methyltransferase, SAM-dependent|Methyltransferase EgtD-like|S-adenosyl-L-methionine-dependent methyltransferase PF10017|PIRSF018005|SSF53335|TIGR03438 BKD09_RS45975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|SSF88659|SSF88946|TIGR02937 BKD09_RS45980 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 BKD09_RS45985 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007339|IPR016865 Protein of unknown function DUF417|Uncharacterised conserved protein UCP028065, membrane PF04224|PIRSF028065 BKD09_RS45990 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR000719|IPR003018|IPR003594|IPR003661|IPR004358|IPR008271|IPR011009|IPR027417|IPR029016 GAF domain|GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|P-loop containing nucleoside triphosphate hydrolase|PAS domain|Protein kinase domain|Protein kinase-like domain|Serine/threonine-protein kinase, active site|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0004672|GO:0005515|GO:0005524|GO:0006468|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.510.10|G3DSA:3.30.450.20|G3DSA:3.30.450.40|G3DSA:3.30.565.10|G3DSA:3.40.50.300|PF00069|PF00512|PF01590|PF02518|PF13191|PF13426|PR00344|PS00108|SM00065|SM00091|SM00220|SM00387|SM00388|SSF47384|SSF52540|SSF55781|SSF55785|SSF55874|SSF56112|TIGR00229 BKD09_RS45995 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007361 Domain of unknown function DUF427 PF04248 BKD09_RS46005 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR018060|IPR032783 AraC-type transcription regulator, ligand-binding domain|DNA binding HTH domain, AraC-type|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PF12852|SM00342|SSF46689 BKD09_RS46010 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003779|IPR004675|IPR010195|IPR029032 AhpD-like|Alkylhydroperoxidase AhpD core|Carboxymuconolactone decarboxylase-like|Uncharacterised peroxidase-related GO:0051920|GO:0055114 G3DSA:1.20.1290.10|PF02627|SSF69118|TIGR00778|TIGR01926 BKD09_RS46015 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007339|IPR016865 Protein of unknown function DUF417|Uncharacterised conserved protein UCP028065, membrane PF04224|PIRSF028065 BKD09_RS46020 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|SSF46785|SSF53850 BKD09_RS46025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001155|IPR013785 Aldolase-type TIM barrel|NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0003824|GO:0010181|GO:0016491|GO:0055114 G3DSA:3.20.20.70|PF00724|SSF51395 BKD09_RS46035 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011008 Dimeric alpha-beta barrel G3DSA:3.30.70.900|SSF54909 BKD09_RS46040 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|SSF53474 BKD09_RS46045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|SM00849|SSF56281 BKD09_RS46055 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SSF51735 BKD09_RS46060 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001845|IPR011991 HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12840|PR00778|SM00418|SSF46785 BKD09_RS46065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 G3DSA:3.10.310.10|PF02567|PIRSF016184|SSF54506|TIGR00654 BKD09_RS46070 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011141|IPR012328|IPR013601|IPR016039 Chalcone/stilbene synthase, C-terminal|FAE1/Type III polyketide synthase-like protein|Polyketide synthase, type III|Thiolase-like GO:0003824|GO:0006633|GO:0008152|GO:0009058|GO:0016020|GO:0016747 G3DSA:3.40.47.10|PF02797|PF08392|PIRSF000451|SSF53901 BKD09_RS46075 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007269 Isoprenylcysteine carboxyl methyltransferase GO:0004671|GO:0006481|GO:0016021 PF04140 BKD09_RS46080 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004638|IPR011701|IPR020846 Drug resistance transporter EmrB/QacA subfamily|Major facilitator superfamily|Major facilitator superfamily domain GO:0006810|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473|TIGR00711 BKD09_RS46090 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012394|IPR015590|IPR016160|IPR016161|IPR016162|IPR016163|IPR029510 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase NAD(P)-dependent|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase GO:0004030|GO:0006081|GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PIRSF036492|PS00070|PS00687|SSF53720 BKD09_RS46095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000172|IPR007867|IPR012132|IPR023753 FAD/NAD(P)-binding domain|Glucose-methanol-choline oxidoreductase|Glucose-methanol-choline oxidoreductase, C-terminal|Glucose-methanol-choline oxidoreductase, N-terminal GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.50.50.60|PF00732|PF05199|PIRSF000137|PS00623|PS00624|SSF51905|SSF54373 BKD09_RS46100 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00080|PR00081|SM00822|SSF51735 BKD09_RS46105 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 PF02674 BKD09_RS46110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00081|SSF51735 BKD09_RS46115 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|SM00829|SSF50129|SSF51735 BKD09_RS46120 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR022254 Protein of unknown function DUF3775 PF12616 BKD09_RS46125 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|SM00849|SSF56281 BKD09_RS46130 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 G3DSA:3.90.850.10|PF01557|SSF56529 BKD09_RS46135 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004045|IPR010987|IPR012336 Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:3.40.30.10|PF13417|SSF47616|SSF52833 BKD09_RS46140 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001466|IPR012338 Beta-lactamase-related|Beta-lactamase/transpeptidase-like G3DSA:3.40.710.10|PF00144|SSF56601 BKD09_RS46145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|SM00849|SSF56281 BKD09_RS46150 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR000639|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Epoxide hydrolase-like GO:0003824 G3DSA:3.40.50.1820|PF00561|PR00412|SSF53474 BKD09_RS46155 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003251|IPR009078|IPR012347|IPR017040 Ferritin-like superfamily|Ferritin-related|Rubrerythrin|Uncharacterised conserved protein UCP035918 , rubrerythrin/DUF125-related GO:0016491|GO:0046872|GO:0055114 G3DSA:1.20.1260.10|PF02915|PIRSF035918|SSF47240 BKD09_RS46160 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR020556|IPR023631 Amidase signature domain|Amidase, conserved site G3DSA:3.90.1300.10|PF01425|PIRSF001221|PS00571|SSF75304 BKD09_RS46165 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027843|IPR032710 Domain of unknown function DUF4440|NTF2-like domain G3DSA:3.10.450.50|PF14534|SSF54427 BKD09_RS46170 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002328|IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|Alcohol dehydrogenase, zinc-type, conserved site|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PS00059|SM00829|SSF50129|SSF51735 BKD09_RS46175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006089|IPR006091|IPR009075|IPR009100 Acyl-CoA dehydrogenase, conserved site|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0055114 G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PS00073|SSF47203|SSF56645 BKD09_RS46180 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF00106|PR00081|SSF51735 BKD09_RS46185 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001753|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|SSF52096 BKD09_RS46190 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 BKD09_RS46195 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009506 Protein of unknown function DUF1127 PF06568 BKD09_RS46200 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS46205 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005828|IPR005829|IPR020846 Major facilitator superfamily domain|Major facilitator, sugar transporter-like|Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1250.20|PF00083|PS00216|PS00217|SSF103473 BKD09_RS46210 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 G3DSA:2.102.10.10|PF00355|SSF50022 BKD09_RS46215 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006680|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase GO:0016787 G3DSA:3.20.20.140|PF04909|SSF51556 BKD09_RS46220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006680|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase GO:0016787 G3DSA:3.20.20.140|PF04909|SSF51556 BKD09_RS46225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008136 CinA, C-terminal G3DSA:3.90.950.20|PF02464|SSF142433|TIGR00199 BKD09_RS46230 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001375|IPR016986|IPR029058 Alpha/Beta hydrolase fold|Peptidase S9, prolyl oligopeptidase, catalytic domain|Uncharacterised conserved protein UCP031982, alpha/beta hydrolase, XabL GO:0006508|GO:0008236 G3DSA:3.40.50.1820|PF00326|PIRSF031982|SSF53474 BKD09_RS46240 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009962 Protein of unknown function DUF1488 PF07369|SSF160272 BKD09_RS46245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13181|SM00028|SSF48452 BKD09_RS46250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000845|IPR011271|IPR018953 AMP nucleosidase|AMP nucleoside phosphorylase, N-terminal|Nucleoside phosphorylase domain GO:0003824|GO:0008714|GO:0009116|GO:0044209 G3DSA:3.30.1730.10|G3DSA:3.40.50.1580|MF_01932|PF01048|PF10423|SSF53167|TIGR01717 BKD09_RS46255 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003997|IPR010129 RTX secretion protein D, Gram-negative bacteria|Type I secretion membrane fusion protein, HlyD family GO:0009306|GO:0015031|GO:0016020|GO:0016021 G3DSA:2.40.50.100|PF13437|PF13533|PR01490|TIGR01843 BKD09_RS46260 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR010128|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|ATPase, type I secretion system, PrtD|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0008565|GO:0016021|GO:0016887|GO:0030253|GO:0030256|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|SM00382|SSF52540|SSF90123|TIGR01842 BKD09_RS46265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007341 Transglycosylase-associated protein GO:0016021 PF04226 BKD09_RS46270 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540|TIGR01727 BKD09_RS46275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR020556|IPR023631 Amidase signature domain|Amidase, conserved site G3DSA:3.90.1300.10|PF01425|PS00571|SSF75304 BKD09_RS46285 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540|TIGR01727 BKD09_RS46290 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR025966 ABC transporter type 1, transmembrane domain MetI-like|Oligopeptide transport permease C-like, N-terminal domain GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PF12911|SSF161098 BKD09_RS46295 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS46300 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|SSF53850 BKD09_RS46305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|SSF53850 BKD09_RS46310 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001054|IPR007890|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|CHASE2|Nucleotide cyclase GO:0009190|GO:0016849|GO:0035556 G3DSA:3.30.70.1230|PF00211|PF05226|SM00044|SM01080|SSF55073 BKD09_RS46315 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006860|IPR010221|IPR012332 FecR protein|P22 tailspike C-terminal domain-like|VCBS repeat G3DSA:2.160.20.20|PF04773|TIGR01965 BKD09_RS46325 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010319 Transglutaminase-like cysteine peptidase, predicted PF06035|SSF54001 BKD09_RS46330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR018060|IPR018062|IPR020449 DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PR00032|PS00041|SM00342|SSF46689 BKD09_RS46340 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000709|IPR028081|IPR028082 Leu/Ile/Val-binding protein|Leucine-binding protein domain|Periplasmic binding protein-like I GO:0006865 G3DSA:3.40.50.2300|PF13458|PR00337|SSF53822 BKD09_RS46345 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000873|IPR020845 AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PS00455|SSF56801 BKD09_RS46350 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030660 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|High-affinity branched-chain amino acid transport ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015658|GO:0015803|GO:0016887 G3DSA:3.40.50.300|PF00005|PIRSF039137|PS00211|SM00382|SSF52540 BKD09_RS46355 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|SM00382|SSF52540 BKD09_RS46360 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS46365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653 BKD09_RS46370 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 BKD09_RS46380 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF13483|SSF56281 BKD09_RS46390 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006680|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase GO:0016787 G3DSA:3.20.20.140|PF04909|SSF51556 BKD09_RS46395 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008579|IPR011051|IPR014710 Domain of unknown function DUF861, cupin-3|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF05899|SSF51182 BKD09_RS46405 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 PF02073|PR00919|SSF144052 BKD09_RS46410 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000362|IPR008948|IPR012789|IPR019468|IPR022761|IPR024083 3-carboxy-cis,cis-muconate cycloisomerase|Adenylosuccinate lyase C-terminal|Fumarase/histidase, N-terminal|Fumarate lyase family|Fumarate lyase, N-terminal|L-Aspartase-like GO:0003824|GO:0019619|GO:0047472 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|PF00206|PF10397|PR00145|PR00149|SM00998|SSF48557|TIGR02426 BKD09_RS46415 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001867|IPR007195|IPR011990|IPR011991|IPR016032|IPR019734 OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Tetratricopeptide repeat|Tetratricopeptide-like helical domain|TolB, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0005515|GO:0006355|GO:0015031|GO:0042597 G3DSA:1.10.10.10|G3DSA:1.25.40.10|G3DSA:3.40.50.10070|PF00486|SM00028|SM00862|SSF46894|SSF48452|SSF52964 BKD09_RS46420 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006913|IPR011057 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V|Mss4-like GO:0008152|GO:0016846 G3DSA:3.90.1590.10|PF04828|SSF51316 BKD09_RS46425 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009915 NnrU domain PF07298 BKD09_RS46430 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001867|IPR011990|IPR011991|IPR016032|IPR019734 OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Tetratricopeptide repeat|Tetratricopeptide-like helical domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0005515|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.25.40.10|PF00486|SM00028|SM00862|SSF46894|SSF48452 BKD09_RS46435 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|SSF47203|SSF56645 BKD09_RS46440 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003313|IPR009057|IPR018060|IPR020449 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|Homeodomain-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PF14525|PR00032|SM00342|SSF46689 BKD09_RS46445 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019223 Domain of unknown function DUF2147 PF09917 BKD09_RS46450 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021747 Protein of unknown function DUF3313 PF11769 BKD09_RS46455 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|SSF46689 BKD09_RS46460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|SSF53850 BKD09_RS46465 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 BKD09_RS46470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR025966 ABC transporter type 1, transmembrane domain MetI-like|Oligopeptide transport permease C-like, N-terminal domain GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PF12911|SSF161098 BKD09_RS46475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540 BKD09_RS46490 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004776 Membrane transport protein GO:0016021|GO:0055085 PF03547 BKD09_RS46510 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 BKD09_RS46515 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003660|IPR004089 HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|SM00283|SM00304|SSF58104 BKD09_RS46520 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|SM00849|SSF56281 BKD09_RS46525 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001874|IPR018509 Dehydroquinase, class II|Dehydroquinase, class II, conserved site GO:0003855 G3DSA:3.40.50.9100|MF_00169|PD004527|PF01220|PIRSF001399|PS01029|SSF52304|TIGR01088 BKD09_RS46530 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004681|IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein GO:0016021 PF06808|PIRSF006066|TIGR00786 BKD09_RS46535 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290 BKD09_RS46540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004682|IPR018389 TRAP transporter solute receptor DctP/TeaA|TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 PF03480|PIRSF006470|TIGR00787 BKD09_RS46545 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|SM00345|SM00895|SSF46785|SSF48008 BKD09_RS46550 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001917|IPR004839|IPR010961|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferase, class-II, pyridoxal-phosphate binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Tetrapyrrole biosynthesis, 5-aminolevulinic acid synthase GO:0003824|GO:0003870|GO:0008152|GO:0009058|GO:0016740|GO:0030170|GO:0033014 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PS00599|SSF53383|TIGR01821 BKD09_RS46555 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002559|IPR008490 Transposase InsH, N-terminal|Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PF01609|PF05598 BKD09_RS46560 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR001789|IPR003594|IPR003661|IPR004358|IPR011006|IPR018212 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAS domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain|Sodium/solute symporter, conserved site GO:0000155|GO:0000160|GO:0005215|GO:0006810|GO:0007165|GO:0016020|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PF12860|PR00344|PS00457|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55785|SSF55874 BKD09_RS46565 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|SM00822|SSF51735 BKD09_RS46570 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032033 Cytochrome P460 PF16694 BKD09_RS46575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR000639|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Epoxide hydrolase-like GO:0003824 G3DSA:3.40.50.1820|PF00561|PR00412|SSF53474 BKD09_RS46580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003718|IPR015946|IPR019953 K homology domain-like, alpha/beta|Organic hydroperoxide resistance protein famiy|OsmC/Ohr family GO:0006979 G3DSA:2.20.25.10|G3DSA:3.30.300.20|PF02566|SSF82784|TIGR03561 BKD09_RS46585 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001867|IPR003593|IPR011990|IPR011991|IPR016032|IPR027417 AAA+ ATPase domain|OmpR/PhoB-type DNA-binding domain|P-loop containing nucleoside triphosphate hydrolase|Signal transduction response regulator, C-terminal effector|Tetratricopeptide-like helical domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0005515|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.25.40.10|G3DSA:3.40.50.300|PF00486|PF13401|PR00364|SM00862|SSF46894|SSF48452|SSF52540 BKD09_RS46590 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PS00622|SM00421|SM00448|SSF46894|SSF52172 BKD09_RS46595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005828|IPR020846 Major facilitator superfamily domain|Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1250.20|PF00083|SSF103473 BKD09_RS46600 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001602 Uncharacterised protein family UPF0047 G3DSA:2.60.120.460|PF01894|PIRSF004681|PS01314|SSF111038|TIGR00149 BKD09_RS46610 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter PF09527 BKD09_RS46615 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000568|IPR023011 ATPase, F0 complex, subunit A|ATPase, F0 complex, subunit A, active site GO:0015078|GO:0015986 G3DSA:1.20.120.220|MF_01393|PF00119|PR00123|PS00449|SSF81336|TIGR01131 BKD09_RS46620 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000454|IPR002379 ATPase, F0 complex, subunit C|V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015986|GO:0015991|GO:0033177|GO:0045263 G3DSA:1.20.20.10|MF_01396|PF00137|PR00124|SSF81333 BKD09_RS46625 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 MF_01398|PF00430 BKD09_RS46630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 MF_01398|PF00430 BKD09_RS46640 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13302|SSF55729 BKD09_RS46645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001431|IPR007863|IPR011237|IPR011249|IPR011765 Metalloenzyme, LuxS/M16 peptidase-like|Peptidase M16 domain|Peptidase M16, C-terminal|Peptidase M16, N-terminal|Peptidase M16, zinc-binding site GO:0003824|GO:0004222|GO:0006508|GO:0046872 G3DSA:3.30.830.10|PF00675|PF05193|PS00143|SSF63411 BKD09_RS46650 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001926|IPR004450|IPR029144 Threonine synthase, N-terminal|Threonine synthase-like|Tryptophan synthase beta subunit-like PLP-dependent enzyme G3DSA:3.40.50.1100|G3DSA:3.90.1380.10|PF00291|PF14821|SSF53686|TIGR00260 BKD09_RS46655 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|SM00421|SM00448|SSF46894|SSF52172 BKD09_RS46660 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003594|IPR003660|IPR011712 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0004871|GO:0007165|GO:0016021|GO:0046983 G3DSA:3.30.565.10|PF00672|PF07730|SSF55874 BKD09_RS46665 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032710 NTF2-like domain G3DSA:3.10.450.50|SSF54427 BKD09_RS46670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002994 Surfeit locus 1/Shy1 GO:0016020 PF02104 BKD09_RS46675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009325 Protein of unknown function DUF983 PF06170 BKD09_RS46680 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000298|IPR013833 Cytochrome c oxidase subunit III domain|Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0015002|GO:0016020|GO:0022904 G3DSA:1.10.287.70|G3DSA:1.20.120.80|PF00510|SSF81452 BKD09_RS46685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007533|IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11|Cytochrome c oxidase assembly protein CtaG/Cox11, domain GO:0005507 G3DSA:2.60.370.10|MF_00155|PF04442|PIRSF005413|SSF110111 BKD09_RS46695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000537|IPR006369|IPR030470 Protohaem IX farnesyltransferase|UbiA prenyltransferase conserved site|UbiA prenyltransferase family GO:0004659|GO:0008495|GO:0016021|GO:0048034 MF_00154|PF01040|PS00943|TIGR01473 BKD09_RS46700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000883|IPR014241|IPR023615|IPR023616 Cytochrome c oxidase subunit I|Cytochrome c oxidase, subunit I bacterial type|Cytochrome c oxidase, subunit I domain|Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0005506|GO:0005507|GO:0005886|GO:0006810|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0022900|GO:0055114 G3DSA:1.20.210.10|PF00115|PR01165|PS00077|SSF81442|TIGR02891 BKD09_RS46705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001505|IPR002429|IPR008972|IPR011759|IPR014222 Copper centre Cu(A)|Cupredoxin|Cytochrome C oxidase subunit II, transmembrane domain|Cytochrome c oxidase subunit II C-terminal|Cytochrome c oxidase, subunit II GO:0004129|GO:0005507|GO:0016020|GO:0016021|GO:0016491|GO:0022900 G3DSA:1.10.287.90|G3DSA:2.60.40.420|PF00116|PF02790|PR01166|PS00078|SSF49503|SSF81464|TIGR02866 BKD09_RS46710 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010642 Invasion protein B PF06776 BKD09_RS46715 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002510|IPR025502 Metalloprotease TldD/PmbA|TldD GO:0006508|GO:0008237 PF01523|PIRSF004919|SSF111283 BKD09_RS46720 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000223|IPR015927|IPR019756|IPR019757|IPR019758|IPR019759|IPR028360 Peptidase S24/S26, beta-ribbon domain|Peptidase S24/S26A/S26B|Peptidase S24/S26A/S26B/S26C|Peptidase S26A, signal peptidase I|Peptidase S26A, signal peptidase I, conserved site|Peptidase S26A, signal peptidase I, lysine active site|Peptidase S26A, signal peptidase I, serine active site GO:0006508|GO:0008236|GO:0016020|GO:0016021 G3DSA:2.10.109.10|PF00717|PR00727|PS00501|PS00760|PS00761|SSF51306|TIGR02227 BKD09_RS46730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009267 Putative nucleotidyltransferase PF06042 BKD09_RS46735 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS46740 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 BKD09_RS46745 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF12706|SSF56281 BKD09_RS46750 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019088 Conserved hypothetical protein CHP02186-related, transmembrane PF09608|TIGR02186 BKD09_RS46755 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925 BKD09_RS46760 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006597|IPR011990 Sel1-like repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF08238|SM00671|SSF81901 BKD09_RS46765 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 BKD09_RS46770 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005149|IPR011991|IPR018309 Transcription regulator PadR, C-terminal|Transcription regulator PadR, N-terminal|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF03551|PF10400|SSF46785 BKD09_RS46775 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009959|IPR032710 NTF2-like domain|Polyketide cyclase SnoaL-like domain G3DSA:3.10.450.50|PF12680|SSF54427 BKD09_RS46780 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006091|IPR009075|IPR009100|IPR013786|IPR020953|IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain|Acyl-CoA dehydrogenase, N-terminal, bacteria|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PF12418|PF12806|SSF47203|SSF56645 BKD09_RS46785 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002155|IPR016039|IPR020610|IPR020613|IPR020615|IPR020616|IPR020617 Thiolase|Thiolase, C-terminal|Thiolase, N-terminal|Thiolase, active site|Thiolase, acyl-enzyme intermediate active site|Thiolase, conserved site|Thiolase-like GO:0003824|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00108|PF02803|PIRSF000429|PS00098|PS00099|PS00737|SSF53901|TIGR01930 BKD09_RS46790 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001753|IPR006108|IPR006176|IPR008927|IPR013328|IPR016040|IPR029045 3-hydroxyacyl-CoA dehydrogenase, C-terminal|3-hydroxyacyl-CoA dehydrogenase, NAD binding|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|ClpP/crotonase-like domain|Crotonase superfamily|NAD(P)-binding domain GO:0003824|GO:0003857|GO:0006631|GO:0008152|GO:0016491|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|G3DSA:3.90.226.10|PF00378|PF00725|PF02737|SSF48179|SSF51735|SSF52096 BKD09_RS46805 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004045|IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF02798|PF14497|SSF47616|SSF52833 BKD09_RS46810 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12802|PR00598|SM00347|SSF46785 BKD09_RS46815 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006336|IPR011556 Glutamate--cysteine ligase, GCS2|Glutamate--cysteine ligase, plant GO:0004357|GO:0006750|GO:0042398 PF04107|PIRSF017901|SSF55931|TIGR01436 BKD09_RS46820 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003609 PAN/Apple domain G3DSA:3.50.4.10|PF14295 BKD09_RS46830 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000811|IPR011833 Glycogen/starch/alpha-glucan phosphorylase|Glycosyl transferase, family 35 GO:0004645|GO:0005975|GO:0008184|GO:0030170 G3DSA:3.40.50.2000|PF00343|PIRSF000460|PS00102|SSF53756|TIGR02093 BKD09_RS46835 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029069 HotDog domain G3DSA:3.10.129.10|PF13622|SSF54637 BKD09_RS46840 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001272|IPR008210|IPR013035|IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site|Phosphoenolpyruvate carboxykinase, ATP-utilising|Phosphoenolpyruvate carboxykinase, C-terminal|Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0004612|GO:0005524|GO:0006094|GO:0017076 G3DSA:3.40.449.10|G3DSA:3.90.228.20|MF_00453|PF01293|PIRSF006294|PS00532|SSF53795|SSF68923|TIGR00224 BKD09_RS46845 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002151|IPR011990|IPR019734|IPR024983 CHAT domain|Kinesin light chain|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0003777|GO:0005515|GO:0005871 G3DSA:1.25.40.10|PF12770|PF13424|PR00381|SM00028|SSF48452 BKD09_RS46850 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012349|IPR019595 Domain of unknown function DUF2470|FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|G3DSA:3.20.180.10|PF10615|PF13883|SSF50475 BKD09_RS46855 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|SM00448|SM00862|SSF46894|SSF52172 BKD09_RS46860 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003594|IPR003660|IPR003661|IPR004358|IPR025908|IPR025919 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Sensor N-terminal transmembrane domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Stimulus-sensing domain GO:0000155|GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PF13755|PF13756|PR00344|SM00304|SM00387|SM00388|SSF47384|SSF55874 BKD09_RS46865 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011104|IPR027417 HPr kinase/phosphorylase, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 G3DSA:3.40.50.300|PF07475|SSF53795 BKD09_RS46870 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 G3DSA:3.40.50.510|PF03610|SSF53062 BKD09_RS46875 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000032|IPR001020 Phosphocarrier protein HPr-like|Phosphotransferase system, HPr histidine phosphorylation site G3DSA:3.30.1340.10|PF00381|PR00107|PS00369|SSF55594|TIGR01003 BKD09_RS46880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic PF13231 BKD09_RS46885 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000640|IPR000795|IPR004161|IPR005225|IPR006297|IPR009022|IPR013842|IPR027417|IPR031157 Elongation factor 4|Elongation factor G, III-V domain|GTP-binding protein LepA, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFG, V domain|Translation elongation factor EFTu-like, domain 2 GO:0003924|GO:0005525 G3DSA:2.40.30.10|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|MF_00071|PF00009|PF00679|PF03144|PF06421|PR00315|PS00301|SM00838|SSF52540|SSF54980|TIGR00231|TIGR01393 BKD09_RS46895 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|SSF53474 BKD09_RS46900 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001867|IPR011990|IPR011991|IPR016032|IPR019734 OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Tetratricopeptide repeat|Tetratricopeptide-like helical domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0005515|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.25.40.10|PF00486|SM00028|SM00862|SSF46894|SSF48452 BKD09_RS46905 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007487 ABC transporter, substrate-binding protein G3DSA:3.40.50.2300|PF04392 BKD09_RS46910 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032710 NTF2-like domain SSF54427 BKD09_RS46925 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004017|IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Cysteine-rich domain G3DSA:1.10.1060.10|PF00037|PF02754|PS00198|SSF54862 BKD09_RS46930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013538|IPR023393 Activator of Hsp90 ATPase homologue 1-like|START-like domain GO:0006950 G3DSA:3.30.530.20|PF08327|SSF55961 BKD09_RS46945 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001077|IPR011991|IPR016461|IPR029063 O-methyltransferase COMT-type|O-methyltransferase, family 2|S-adenosyl-L-methionine-dependent methyltransferase|Winged helix-turn-helix DNA-binding domain GO:0008168|GO:0008171 G3DSA:1.10.10.10|G3DSA:3.40.50.150|PF00891|PIRSF005739|SSF46785|SSF53335 BKD09_RS46950 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|SSF53850 BKD09_RS46960 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001867|IPR011990|IPR011991|IPR016032 OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Tetratricopeptide-like helical domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0005515|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.25.40.10|PF00486|SM00862|SSF46894|SSF48452 BKD09_RS46965 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001867|IPR011990|IPR011991|IPR016032 OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Tetratricopeptide-like helical domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0005515|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.25.40.10|PF00486|SM00862|SSF46894|SSF48452 BKD09_RS46970 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS46975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009075|IPR009100|IPR013107|IPR013786 Acyl-CoA dehydrogenase, C-terminal domain|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF02771|PF08028|PIRSF016578|SSF47203|SSF56645 BKD09_RS46980 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000014|IPR000160|IPR001633|IPR029787 EAL domain|GGDEF domain|Nucleotide cyclase|PAS domain G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00563|PF00990|PF12860|PF13188|SM00052|SM00091|SM00267|SSF141868|SSF55073|SSF55785|TIGR00229|TIGR00254 BKD09_RS46985 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005073|IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain|Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 G3DSA:3.30.1380.10|PF03411|PIRSF018455|SSF55166 BKD09_RS46995 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 G3DSA:3.40.190.10|PF13531|PIRSF004846|SSF53850|TIGR01256 BKD09_RS47000 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000515|IPR011867 ABC transporter type 1, transmembrane domain MetI-like|Molybdate ABC transporter, permease protein GO:0006810|GO:0015098|GO:0015689|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR02141 BKD09_RS47005 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR011868|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate ABC transporter, ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015098|GO:0015689|GO:0016020|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540|TIGR02142 BKD09_RS47010 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005170|IPR006153|IPR016166|IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|Cation/H+ exchanger|FAD-binding, type 2|Transporter-associated domain GO:0003824|GO:0006812|GO:0015299|GO:0016021|GO:0016614|GO:0050660|GO:0055085|GO:0055114 G3DSA:3.30.465.10|PF00999|PF03471|SM01091|SSF56176 BKD09_RS47015 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006685|IPR010920|IPR011014|IPR011066 LSM domain|Mechanosensitive ion channel MscS|Mechanosensitive ion channel MscS, C-terminal|Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020|GO:0055085 G3DSA:2.30.30.60|G3DSA:3.30.70.100|PF00924|SSF50182|SSF82689|SSF82861 BKD09_RS47020 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000994|IPR001714|IPR002467 Peptidase M24, methionine aminopeptidase|Peptidase M24, structural domain|Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 G3DSA:3.90.230.10|MF_01974|PF00557|PR00599|SSF55920|TIGR00500 BKD09_RS47025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|SM00822|SSF51735 BKD09_RS47030 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|SSF46689|SSF48498 BKD09_RS47035 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004026|IPR009057|IPR016220|IPR018060|IPR018062 Ada DNA repair, metal-binding|DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Methylphosphotriester-DNA alkyltransferase, AdaA GO:0003677|GO:0003700|GO:0006281|GO:0006355|GO:0008168|GO:0008270|GO:0043565 G3DSA:1.10.10.60|G3DSA:3.40.10.10|PF02805|PF12833|PIRSF000408|PS00041|SM00342|SSF46689|SSF57884 BKD09_RS47040 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 BKD09_RS47045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007138|IPR011008 Antibiotic biosynthesis monooxygenase domain|Dimeric alpha-beta barrel G3DSA:3.30.70.900|PF03992|SSF54909 BKD09_RS47050 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase G3DSA:3.10.180.10|SSF54593 BKD09_RS47055 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001405|IPR010994|IPR025657 RadC protein|RadC-like JAB domain|RuvA domain 2-like G3DSA:1.10.150.20|G3DSA:3.40.140.10|PF04002|SSF47781|TIGR00608 BKD09_RS47060 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002104|IPR011010|IPR013762|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|SSF56349 BKD09_RS47065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009362 Protein of unknown function DUF1016 PF06250 BKD09_RS47075 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13476|SSF52540 BKD09_RS47085 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413 BKD09_RS47095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|SSF52540 BKD09_RS47100 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025161 Putative transposase IS4/IS5 family PF13340 BKD09_RS47110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR011991|IPR012337 Homeodomain-like|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0003677 G3DSA:1.10.10.10|G3DSA:3.30.420.10|PF13358|PF13565|SSF46689|SSF53098 BKD09_RS47115 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012337|IPR025161|IPR025668 Putative transposase IS4/IS5 family|Ribonuclease H-like domain|Transposase DDE domain GO:0003676 PF13340|PF13586|SSF53098 BKD09_RS47120 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371 BKD09_RS47130 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001647|IPR009057|IPR011075|IPR015893|IPR023772 DNA-binding HTH domain, TetR-type|DNA-binding HTH domain, TetR-type, conserved site|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PS01081|SSF46689|SSF48498 BKD09_RS47135 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005490 L,D-transpeptidase catalytic domain GO:0016740 G3DSA:2.40.440.10|PF03734|SSF141523 BKD09_RS47140 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|SSF51735 BKD09_RS47145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR000639|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Epoxide hydrolase-like GO:0003824 G3DSA:3.40.50.1820|PF00561|PR00412|SSF53474 BKD09_RS47150 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase G3DSA:3.10.180.10|PF13669|SSF54593 BKD09_RS47155 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011008 Dimeric alpha-beta barrel G3DSA:3.30.70.900|SSF54909 BKD09_RS47165 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008490 Transposase InsH, N-terminal PF05598 BKD09_RS47170 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413 BKD09_RS47180 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011009 Protein kinase-like domain SSF56112 BKD09_RS47185 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025159 Transcriptional regulator, AbiEi antitoxin PF13338 BKD09_RS47205 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002104|IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|SSF56349 BKD09_RS47210 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004291 Transposase, IS66 PF03050 BKD09_RS47215 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000123|IPR000477|IPR013597|IPR030931 Group II intron reverse transcriptase/maturase|Group II intron, maturase-specific|RNA-directed DNA polymerase (reverse transcriptase), msDNA|Reverse transcriptase domain GO:0003723|GO:0003964|GO:0006278 PF00078|PF08388|PR00866|SSF56672|TIGR04416 BKD09_RS47220 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 BKD09_RS47225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002586|IPR027417 CobQ/CobB/MinD/ParA nucleotide binding domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF01656|PIRSF009320|SSF52540 BKD09_RS47235 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002611|IPR003593|IPR027417|IPR028350 AAA+ ATPase domain|DNA replication protein DnaC/insertion sequence putative ATP-binding protein|IstB-like ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF01695|PIRSF003073|SM00382|SSF52540 BKD09_RS47240 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001584|IPR011991|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0015074 G3DSA:1.10.10.10|G3DSA:3.30.420.10|PF00665|SSF53098 BKD09_RS47245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|SSF55729 BKD09_RS47285 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002938|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain GO:0016491|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF01494|PR00420|SSF51905 BKD09_RS47290 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015590|IPR016161|IPR016163 Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|PF00171|SSF53720 BKD09_RS47300 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010921|IPR011991 Trp repressor/replication initiator|Winged helix-turn-helix DNA-binding domain GO:0043565 G3DSA:1.10.10.10|PF13565|SSF48295 BKD09_RS47305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002514|IPR009057|IPR010921 Homeodomain-like|Transposase IS3/IS911family|Trp repressor/replication initiator GO:0003677|GO:0004803|GO:0006313|GO:0043565 G3DSA:1.10.10.60|PF01527|SSF48295 BKD09_RS47315 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001584|IPR011991|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0015074 G3DSA:1.10.10.10|G3DSA:3.30.420.10|PF00665|SSF53098 BKD09_RS47320 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002611|IPR003593|IPR013690|IPR027417|IPR028350 AAA+ ATPase domain|DNA replication protein DnaC/insertion sequence putative ATP-binding protein|IstB-like ATP binding N-terminal|IstB-like ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF01695|PF08483|PIRSF003073|SM00382|SSF52540 BKD09_RS47325 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13683|SSF53098 BKD09_RS47365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011095|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|D-alanine--D-alanine ligase, C-terminal|Pre-ATP-grasp domain GO:0003824|GO:0005524|GO:0008716 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|PF07478|SSF52440|SSF56059 BKD09_RS47370 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase PF14402 BKD09_RS47375 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000101|IPR029055 Gamma-glutamyltranspeptidase|Nucleophile aminohydrolases, N-terminal GO:0003840|GO:0006749 PF01019|PR01210|SSF56235 BKD09_RS47395 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR011991 Homeodomain-like|Winged helix-turn-helix DNA-binding domain GO:0003677 G3DSA:1.10.10.10|SSF46689 BKD09_RS47405 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002514|IPR009057|IPR010921 Homeodomain-like|Transposase IS3/IS911family|Trp repressor/replication initiator GO:0003677|GO:0004803|GO:0006313|GO:0043565 G3DSA:1.10.10.60|PF01527|SSF48295 BKD09_RS47410 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001584|IPR012337|IPR025948 HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PF13276|SSF53098 BKD09_RS47420 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008878 Transposase IS66, Orf2 PF05717 BKD09_RS47425 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002514|IPR009057|IPR010921 Homeodomain-like|Transposase IS3/IS911family|Trp repressor/replication initiator GO:0003677|GO:0004803|GO:0006313|GO:0043565 G3DSA:1.10.10.60|PF01527|SSF48295 BKD09_RS47440 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008893 WGR domain G3DSA:2.20.140.10|PF05406|SM00773|SSF142921 BKD09_RS47450 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003653 Ulp1 protease family, C-terminal catalytic domain GO:0006508|GO:0008234 G3DSA:3.30.310.130|PF02902|SSF54001 BKD09_RS47460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413 BKD09_RS47465 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010260 Prophage CP4-57 regulatory protein (AlpA) PF05930 BKD09_RS47485 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR024997 Protein of unknown function DUF3892 PF13031 BKD09_RS47500 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002059|IPR011129|IPR012156|IPR012340|IPR019844 Cold shock protein|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|SM00357|SSF50249 BKD09_RS47540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006500|IPR014818|IPR027417 Bacteriophage/plasmid primase, P4, C-terminal|DNA primase, phage/plasmid|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF08706|SM00885|TIGR01613 BKD09_RS47550 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015330 DNA primase/polymerase, bifunctional, N-terminal PF09250|SM00943|SSF56747 BKD09_RS47570 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002514|IPR009057|IPR010921 Homeodomain-like|Transposase IS3/IS911family|Trp repressor/replication initiator GO:0003677|GO:0004803|GO:0006313|GO:0043565 G3DSA:1.10.10.60|PF01527|SSF48295 BKD09_RS47575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001584|IPR012337|IPR025948 HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PF13276|SSF53098 BKD09_RS47635 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00196|SM00421|SSF46894 BKD09_RS47645 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|SSF46785|SSF53850 BKD09_RS47655 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|SSF53474 BKD09_RS47660 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018733 Protein of unknown function DUF2274 PF10038 BKD09_RS47665 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005498 Type IV secretion system, VirB10 / TraB / TrbI PF03743 BKD09_RS47670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010258|IPR014142 Conjugal transfer, TrbG/VirB9/CagX|P-type conjugative transfer protein TrbG PF03524|TIGR02775 BKD09_RS47675 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007430|IPR032710 Bacterial virulence protein VirB8|NTF2-like domain GO:0016020 PF04335|SSF54427 BKD09_RS47680 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007688|IPR014150 Conjugal transfer, TrbL|Plasmid conjugal transfer TrbL/VirB6 GO:0030255 PF04610|TIGR02783 BKD09_RS47685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR027587 Conjugative transfer region protein TrbK TIGR04360 BKD09_RS47690 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014147 Type IV conjugative transfer protein TrbJ TIGR02780 BKD09_RS47695 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003593|IPR018145|IPR027417 AAA+ ATPase domain|CagE, TrbE, VirB component of type IV transporter system, central domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF03135|SM00382|SSF52540 BKD09_RS47700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007792|IPR016704 Conjugal transfer, TrbD|Type IV secretion system, VirB3 / TrbD / AvhB PF05101|PIRSF017854 BKD09_RS47705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 PF04956 BKD09_RS47710 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001482|IPR014149|IPR027417 Conjugative transfer, TrbB|P-loop containing nucleoside triphosphate hydrolase|Type II secretion system protein E GO:0000746|GO:0005524|GO:0005737|GO:0006810 G3DSA:3.30.450.90|G3DSA:3.40.50.300|PF00437|SSF52540|TIGR02782 BKD09_RS47720 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008878 Transposase IS66, Orf2 PF05717 BKD09_RS47730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540|SSF90123 BKD09_RS47755 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006171 Toprim domain PF13362 BKD09_RS47760 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 PF01548 BKD09_RS47770 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019627 Mycobacteriophage D29, Gp61 PF10686 BKD09_RS47775 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SSF88946 BKD09_RS47780 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF02371 BKD09_RS47785 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 BKD09_RS47790 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic SSF140959 BKD09_RS47795 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006638|IPR007197|IPR010723|IPR023404 Elongator protein 3/MiaB/NifB|HemN, C-terminal|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0051536 G3DSA:3.80.30.20|PF04055|PF06969|SM00729|SSF102114 BKD09_RS47805 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000119|IPR010992 Histone-like DNA-binding protein|Integration host factor (IHF)-like DNA-binding domain GO:0003677 G3DSA:4.10.520.10|PF00216|PR01727|SM00411|SSF47729 BKD09_RS47810 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008490 Transposase InsH, N-terminal PF05598 BKD09_RS47815 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000123|IPR000477|IPR013597|IPR030931 Group II intron reverse transcriptase/maturase|Group II intron, maturase-specific|RNA-directed DNA polymerase (reverse transcriptase), msDNA|Reverse transcriptase domain GO:0003723|GO:0003964|GO:0006278 PF00078|PF08388|PR00866|SSF56672|TIGR04416 BKD09_RS47820 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PD043187|PF00665|SSF53098 BKD09_RS47835 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011991 Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10 BKD09_RS47840 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR024997 Protein of unknown function DUF3892 PF13031 BKD09_RS47850 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13683|SSF53098 BKD09_RS47890 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025827 Recombinase zinc beta ribbon domain PF13408 BKD09_RS47930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 PF04471 BKD09_RS47935 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 G3DSA:3.40.50.1580|PF01048|SSF53167 BKD09_RS47940 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR020891|IPR025657 RadC-like JAB domain|Uncharacterised protein family UPF0758, conserved site G3DSA:3.40.140.10|PF04002|PS01302 BKD09_RS47945 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006683|IPR029069 HotDog domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|SSF54637 BKD09_RS47965 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025668 Transposase DDE domain PF13586 BKD09_RS47975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003882|IPR006665 OmpA-like domain|Pistil-specific extensin-like protein GO:0005199 G3DSA:3.30.1330.60|PF00691|PR01218|SSF103088 BKD09_RS47995 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002586|IPR027417 CobQ/CobB/MinD/ParA nucleotide binding domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF01656|SSF52540 BKD09_RS48010 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000271|IPR020939 Ribosomal protein L34|Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00391|PD003101|PF00468|PS00784|TIGR01030 BKD09_RS48045 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007419 BFD-like [2Fe-2S]-binding domain PF04324 BKD09_RS48055 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|SSF56349 BKD09_RS48060 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10 BKD09_RS48065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008168|IPR009056 Cytochrome c, class IC|Cytochrome c-like domain GO:0005506|GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|PR00605|SSF46626 BKD09_RS48070 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009959|IPR032710 NTF2-like domain|Polyketide cyclase SnoaL-like domain G3DSA:3.10.450.50|PF12680|SSF54427 BKD09_RS48075 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016071 Staphylococcal nuclease (SNase-like), OB-fold G3DSA:2.40.50.90|SSF50199 BKD09_RS48085 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057|IPR018060 DNA binding HTH domain, AraC-type|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|SSF46689 BKD09_RS48090 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001917|IPR004839|IPR015421|IPR015424 Aminotransferase, class I/classII|Aminotransferase, class-II, pyridoxal-phosphate binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824|GO:0008152|GO:0009058|GO:0016740|GO:0030170 G3DSA:3.40.640.10|PF00155|PS00599|SSF53383 BKD09_RS48095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009270 Domain of unknown function DUF927 PF06048 BKD09_RS48105 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016040 NAD(P)-binding domain G3DSA:3.40.50.720|PF13561|SSF51735 BKD09_RS48110 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 G3DSA:3.30.365.10|PF02738|SSF56003 BKD09_RS48120 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic SSF141371 BKD09_RS48125 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025668 Transposase DDE domain PF13751 BKD09_RS48130 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025668 Transposase DDE domain PF13751 BKD09_RS48150 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015927|IPR019533|IPR028360 Peptidase S24/S26, beta-ribbon domain|Peptidase S24/S26A/S26B/S26C|Peptidase S26 G3DSA:2.10.109.10|PF10502|SSF51306 BKD09_RS48160 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008486 Protein of unknown function DUF768 PF05589 BKD09_RS48165 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018968 Phasin PF09361 BKD09_RS48175 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019291 Host attachment protein PF10116 BKD09_RS48180 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006603 PQ-loop repeat PF04193 BKD09_RS48225 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011051 RmlC-like cupin domain SSF51182 BKD09_RS48230 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SSF52172 BKD09_RS48240 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025668 Transposase DDE domain PF13586 BKD09_RS48250 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 G3DSA:3.30.470.30|PF01068|SSF56091 BKD09_RS48260 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001607|IPR013083 Zinc finger, RING/FYVE/PHD-type|Zinc finger, UBP-type GO:0008270 G3DSA:3.30.40.10|PF02148|SSF57850 BKD09_RS48265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger PF14690 BKD09_RS48275 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023210 NADP-dependent oxidoreductase domain G3DSA:3.20.20.100|PF00248|SSF51430 BKD09_RS48285 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011033|IPR027275 PRC-barrel domain|PRC-barrel-like G3DSA:2.30.30.240|PF05239|SSF50346 BKD09_RS48290 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011033|IPR027275 PRC-barrel domain|PRC-barrel-like G3DSA:2.30.30.240|PF05239|SSF50346 BKD09_RS48295 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021327 Protein of unknown function DUF2934 PF11154 BKD09_RS48300 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021327 Protein of unknown function DUF2934 PF11154 BKD09_RS48325 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011991|IPR012318|IPR018335 Crp-type HTH domain|Transcription regulator HTH, Crp-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0005622|GO:0006355 G3DSA:1.10.10.10|PF13545|PR00034|PS00042|SM00419|SSF46785 BKD09_RS48340 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001660|IPR013761 Sterile alpha motif domain|Sterile alpha motif/pointed domain GO:0005515 G3DSA:1.10.150.50|PF00536|SM00454|SSF47769 BKD09_RS48350 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|SSF46626 BKD09_RS48360 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 BKD09_RS48365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021493 Protein of unknown function DUF3147 PF11345 BKD09_RS48370 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009078|IPR010287|IPR012347 Domain of unknown function DUF892|Ferritin-like superfamily|Ferritin-related G3DSA:1.20.1260.10|PF05974|SSF47240 BKD09_RS48385 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021327 Protein of unknown function DUF2934 PF11154 BKD09_RS48405 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR024501 Protein of unknown function DUF3141 PF11339 BKD09_RS48410 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010699 Protein of unknown function DUF1275 PF06912 BKD09_RS48420 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010486 HNS-dependent expression A/B PF06411 BKD09_RS48435 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009579 Protein of unknown function DUF1192 PF06698 BKD09_RS48440 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413 BKD09_RS48445 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system PF08843 BKD09_RS48455 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011121 Tryptophan-rich domain PF07483 BKD09_RS48460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011121 Tryptophan-rich domain PF07483 BKD09_RS48465 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011121 Tryptophan-rich domain PF07483 BKD09_RS48470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000683|IPR016040 NAD(P)-binding domain|Oxidoreductase, N-terminal GO:0016491 G3DSA:3.40.50.720|PF01408|SSF51735 BKD09_RS48475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007343 Uncharacterised protein family, zinc metallopeptidase putative PF04228 BKD09_RS48480 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 G3DSA:3.40.1650.10|SSF102546 BKD09_RS48500 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009875 PilZ domain GO:0035438 PF07238|SSF141371 BKD09_RS48535 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001525|IPR018117|IPR029063 C-5 cytosine methyltransferase|DNA methylase, C-5 cytosine-specific, active site|S-adenosyl-L-methionine-dependent methyltransferase GO:0008168 G3DSA:3.40.50.150|G3DSA:3.90.120.10|PF00145|PR00105|PS00094|SSF53335|TIGR00675 BKD09_RS48540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004603|IPR011335 DNA mismatch endonuclease vsr|Restriction endonuclease type II-like GO:0004519|GO:0006298 G3DSA:3.40.960.10|PF03852|PIRSF018267|SSF52980|TIGR00632 BKD09_RS48575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009061 Putative DNA-binding domain PF12728|SSF46955 BKD09_RS48580 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009050|IPR012292 Globin-like|Globin/Protoglobin GO:0019825|GO:0020037 G3DSA:1.10.490.10|SSF46458 BKD09_RS48590 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009506 Protein of unknown function DUF1127 PF06568 BKD09_RS48620 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PF00924 BKD09_RS48640 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008920|IPR011711 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal G3DSA:1.20.120.530|PF07729|SSF48008 BKD09_RS48665 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021937 Protein of unknown function DUF3551 PF12071 BKD09_RS48670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007047 Flp/Fap pilin component PF04964 BKD09_RS48685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010710 Protein of unknown function DUF1289 PF06945 BKD09_RS48690 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008523 Protein of unknown function DUF805 GO:0016021 PF05656 BKD09_RS48730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009492 TniQ PF06527 BKD09_RS48735 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009492 TniQ PF06527 BKD09_RS48745 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR013099 Potassium channel domain G3DSA:1.10.287.70|PF07885|SSF81324 BKD09_RS48755 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007423 Protein of unknown function DUF466 PF04328 BKD09_RS48765 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018669 Toxin-antitoxin system, toxin component, HigB, putative GO:0016788 PF09907 BKD09_RS48770 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009270 Domain of unknown function DUF927 PF06048 BKD09_RS48780 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003738 SOS response associated peptidase (SRAP) G3DSA:3.90.1680.10|PF02586|SSF143081 BKD09_RS48810 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021529 Protein of unknown function DUF2798 PF11391 BKD09_RS48815 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029060 PIN domain-like SSF88723 BKD09_RS48825 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005656 MmgE/PrpD GO:0016829 PF03972|SSF103378 BKD09_RS48835 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR018721 Protein of unknown function DUF2252 PF10009 BKD09_RS48840 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006603 PQ-loop repeat PF04193 BKD09_RS48845 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021327 Protein of unknown function DUF2934 PF11154 BKD09_RS48850 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002477|IPR005490 L,D-transpeptidase catalytic domain|Peptidoglycan binding-like GO:0016740 G3DSA:1.10.101.10|G3DSA:2.40.440.10|PF01471|PF03734|SSF141523|SSF47090 BKD09_RS48880 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021446 Protein of unknown function DUF3096 PF11295 BKD09_RS48890 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009506 Protein of unknown function DUF1127 PF06568 BKD09_RS48900 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001128|IPR017972 Cytochrome P450|Cytochrome P450, conserved site GO:0005506|GO:0016705|GO:0020037|GO:0055114 G3DSA:1.10.630.10|PS00086|SSF48264 BKD09_RS48905 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011250|IPR020915 Outer membrane protein/outer membrane enzyme PagP, beta-barrel|Uncharacterised protein family UPF0311 GO:0016021 G3DSA:2.40.160.20|PF11578 BKD09_RS48920 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005532|IPR016187 C-type lectin fold|Sulfatase-modifying factor enzyme G3DSA:3.90.1580.10|PF03781|SSF56436 BKD09_RS48930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007487 ABC transporter, substrate-binding protein G3DSA:3.40.50.2300|PF04392 BKD09_RS48975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 BKD09_RS48995 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001506|IPR024079 Metallopeptidase, catalytic domain|Peptidase M12A, astacin GO:0004222|GO:0006508|GO:0008237 G3DSA:3.40.390.10|PF01400|SSF55486 BKD09_RS49010 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR021937 Protein of unknown function DUF3551 PF12071 BKD09_RS49020 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025161 Putative transposase IS4/IS5 family PF13340 BKD09_RS49025 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025668 Transposase DDE domain PF13586 BKD09_RS49040 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like G3DSA:1.20.1200.10 BKD09_RS49050 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic PF13546 BKD09_RS49060 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR020080|IPR023619 Outer membrane adhesin/peptidase omptin|Peptidase A26 GO:0004190 G3DSA:2.40.128.90|SSF69917 BKD09_RS49065 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000192|IPR000277|IPR012703|IPR015421|IPR015422|IPR015424 2-aminoethylphosphonate--pyruvate transaminase|Aminotransferase class V domain|Cys/Met metabolism, pyridoxal phosphate-dependent enzyme|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0019700|GO:0030170|GO:0047304 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01376|PF00266|PF01053|SSF53383 BKD09_RS49090 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.75.10.10|SSF55909 BKD09_RS49095 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:3.75.10.10|SSF55909 BKD09_RS49140 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 BKD09_RS49145 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000792|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00196|SM00421|SSF46894 BKD09_RS49165 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system PF08843 BKD09_RS49170 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012337 Ribonuclease H-like domain GO:0003676 G3DSA:3.30.420.10 BKD09_RS49200 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13333|SSF53098 BKD09_RS49230 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025668 Transposase DDE domain PF13586 BKD09_RS49235 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032874 DDE domain PF13610 BKD09_RS49245 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004291|IPR024474 Transposase, IS66|Zinc-finger binding domain of transposase IS66 PF03050|PF13005 BKD09_RS49265 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 G3DSA:3.40.50.2000|PF00982|SSF53756 BKD09_RS49270 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025668 Transposase DDE domain PF13586 BKD09_RS49285 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025668 Transposase DDE domain PF13586 BKD09_RS49290 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008567|IPR013785 3-keto-5-aminohexanoate cleavage enzyme|Aldolase-type TIM barrel GO:0003824|GO:0016740|GO:0019475 G3DSA:3.20.20.70|PF05853 BKD09_RS49295 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025668 Transposase DDE domain PF13586 BKD09_RS49300 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025161 Putative transposase IS4/IS5 family PF13340 BKD09_RS49305 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011991 Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10 BKD09_RS49310 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025161 Putative transposase IS4/IS5 family PF13340 BKD09_RS49315 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025668 Transposase DDE domain PF13586 BKD09_RS49325 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025399 Domain of unknown function DUF4372 PF14294 BKD09_RS49330 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 G3DSA:3.40.50.1480|PF05221|SSF52283 BKD09_RS49335 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004291 Transposase, IS66 PF03050|PF13817 BKD09_RS49350 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003700|IPR015813 Ketopantoate hydroxymethyltransferase|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0003864|GO:0015940 G3DSA:3.20.20.60|PF02548|SSF51621 BKD09_RS49355 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001584|IPR012337|IPR025948 HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PF13276|SSF53098 BKD09_RS49360 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13683|SSF53098 BKD09_RS49365 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002514|IPR010921|IPR011991 Transposase IS3/IS911family|Trp repressor/replication initiator|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0004803|GO:0006313|GO:0043565 G3DSA:1.10.10.10|PF01527|SSF48295 BKD09_RS49375 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025948 HTH-like domain PF13276 BKD09_RS49390 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008878 Transposase IS66, Orf2 PF05717 BKD09_RS49400 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal TIGR01409 BKD09_RS49405 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004291 Transposase, IS66 PF03050|PF13817 BKD09_RS49410 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR024474 Zinc-finger binding domain of transposase IS66 PF13005 BKD09_RS49440 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001440|IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide repeat 1|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF00515|PF13374|SM00028|SSF48452 BKD09_RS49445 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025375 Domain of unknown function DUF4365 PF14280 BKD09_RS49460 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015794|IPR015795 Pyruvate kinase, C-terminal|Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 G3DSA:3.40.1380.20|PF02887|SSF52935 BKD09_RS49470 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF07992|SSF51905 BKD09_RS49475 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic PF12860 BKD09_RS49495 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|SSF56349 BKD09_RS49500 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|SSF56349 BKD09_RS49505 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015793|IPR015813 Pyruvate kinase, barrel|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0000287|GO:0003824|GO:0004743|GO:0006096|GO:0030955 G3DSA:3.20.20.60|PF00224|SSF51621 BKD09_RS49510 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015793|IPR015813 Pyruvate kinase, barrel|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0000287|GO:0003824|GO:0004743|GO:0006096|GO:0030955 PF00224|SSF51621 BKD09_RS49515 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 G3DSA:3.20.20.60|SSF51621 BKD09_RS49535 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004291 Transposase, IS66 PF03050|PF13817 BKD09_RS49540 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR008878 Transposase IS66, Orf2 PF05717 BKD09_RS49575 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR019027 Pilus biogenesis CpaD-related PF09476 BKD09_RS49595 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057 Homeodomain-like GO:0003677 G3DSA:1.10.10.60|PF13518|SSF46689 BKD09_RS49630 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic G3DSA:1.20.58.90 BKD09_RS49655 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR012336 Thioredoxin-like fold G3DSA:3.40.30.10|SSF52833 BKD09_RS49660 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain G3DSA:3.30.70.20|PF00037|PS00198|SSF54862 BKD09_RS49670 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain G3DSA:3.30.70.20|PF00037|PS00198|SSF54862 BKD09_RS49680 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025668 Transposase DDE domain PF13586 BKD09_RS49685 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004291 Transposase, IS66 PF03050 BKD09_RS49700 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025668 Transposase DDE domain PF13586 BKD09_RS49705 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005498 Type IV secretion system, VirB10 / TraB / TrbI PF03743 BKD09_RS49710 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025668 Transposase DDE domain PF13586 BKD09_RS49715 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025161 Putative transposase IS4/IS5 family PF13340 BKD09_RS49730 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 PF06689 BKD09_RS49735 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025668 Transposase DDE domain PF13586 BKD09_RS49740 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025161 Putative transposase IS4/IS5 family PF13340 BKD09_RS49775 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 PF00872 BKD09_RS49780 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR007711 Toxin HigB-1 PF05015 BKD09_RS49790 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003700|IPR015813 Ketopantoate hydroxymethyltransferase|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0003864|GO:0015940 G3DSA:3.20.20.60|PF02548|SSF51621|TIGR00222 BKD09_RS49810 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PR00507|SSF53335 BKD09_RS49825 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR005498 Type IV secretion system, VirB10 / TraB / TrbI PF03743 BKD09_RS49850 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR003959|IPR027417 ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.1140.10|PF13304|PF13476|SSF52540 BKD09_RS49855 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010617 Endosomal/lysomomal potassium channel TMEM175 GO:0005267 PF06736 BKD09_RS49870 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025668 Transposase DDE domain PF13586 BKD09_RS49885 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR025668 Transposase DDE domain PF13701 BKD09_RS49895 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002204|IPR006115|IPR016040 3-hydroxyisobutyrate dehydrogenase-related, conserved site|6-phosphogluconate dehydrogenase, NADP-binding|NAD(P)-binding domain GO:0004616|GO:0016491|GO:0055114 G3DSA:3.40.50.720|PF03446|PS00895|SSF51735 BKD09_RS49900 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032874 DDE domain PF13610 BKD09_RS49905 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR032874 DDE domain PF13610 BKD09_RS49920 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR009057 Homeodomain-like GO:0003677 G3DSA:1.10.10.60|PF13358|PF13565|SSF46689 BKD09_RS49925 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098 BKD09_RS49930 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR004291 Transposase, IS66 PF03050|PF13817 BKD09_RS49945 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR024997 Protein of unknown function DUF3892 PF13031 BKD09_RS49950 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006433 Prohead protease PF04586 BKD09_RS49955 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR006433 Prohead protease PF04586 BKD09_RS49975 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR020846 Major facilitator superfamily domain G3DSA:1.20.1250.20|SSF103473 BKD09_RS49980 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 BKD09_RS49985 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR010985|IPR013321 Arc-type ribbon-helix-helix|Ribbon-helix-helix GO:0006355 G3DSA:1.10.1220.10|PF12651|SSF47598 BKD09_RS49990 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR002514|IPR009057 Homeodomain-like|Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 G3DSA:1.10.10.60|PF01527|SSF46689 BKD09_RS50000 /var/genomes/g2d_mirror/Bradyrhizobium_japonicum_J5/ASM188769v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|SSF53098