C0R09_RS00005	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
C0R09_RS00010	SM00480	DNA polymerase III beta subunit
C0R09_RS00030	SM00387	Histidine kinase-like ATPases
C0R09_RS00030	SM00433	TopoisomeraseII
C0R09_RS00035	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS00040	SM00825	Beta-ketoacyl synthase
C0R09_RS00055	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS00080	SM00729	Elongator protein 3, MiaB family, Radical SAM
C0R09_RS00080	SM00876	Biotin and Thiamin Synthesis associated domain
C0R09_RS00100	SM00646	C0R09_RS00100
C0R09_RS00105	SM00434	DNA Topoisomerase IV
C0R09_RS00110	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C0R09_RS00135	SM00116	Domain in cystathionine beta-synthase and other proteins.
C0R09_RS00135	SM01240	C0R09_RS00135
C0R09_RS00140	SM00936	Penicillin-binding protein 5, C-terminal domain 
C0R09_RS00200	SM00363	S4 RNA-binding domain
C0R09_RS00210	SM00091	PAS domain
C0R09_RS00210	SM00387	Histidine kinase-like ATPases
C0R09_RS00210	SM00388	His Kinase A (phosphoacceptor) domain
C0R09_RS00215	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS00225	SM00493	C0R09_RS00225
C0R09_RS00315	SM00966	SpoVT / AbrB like domain 
C0R09_RS00335	SM01208	C0R09_RS00335
C0R09_RS00340	SM00493	C0R09_RS00340
C0R09_RS00345	SM00650	Ribosomal RNA adenine dimethylases
C0R09_RS00375	SM00833	Cobalamin synthesis protein cobW C-terminal domain
C0R09_RS00385	SM01400	C0R09_RS00385
C0R09_RS00405	SM00487	DEAD-like helicases superfamily
C0R09_RS00405	SM00490	helicase superfamily c-terminal domain
C0R09_RS00405	SM00982	C0R09_RS00405
C0R09_RS00405	SM01058	CarD-like/TRCF domain
C0R09_RS00415	SM00966	SpoVT / AbrB like domain 
C0R09_RS00430	SM00363	S4 RNA-binding domain
C0R09_RS00450	SM00331	Sigma factor PP2C-like phosphatases
C0R09_RS00450	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
C0R09_RS00460	SM00220	Serine/Threonine protein kinases, catalytic domain
C0R09_RS00475	SM00977	TilS substrate C-terminal domain
C0R09_RS00485	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS00510	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C0R09_RS00515	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS00675	SM00905	Dihydroneopterin aldolase
C0R09_RS00685	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS00755	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS00755	SM01086	C-terminal, D2-small domain, of ClpB protein
C0R09_RS00760	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS00780	SM00670	Large family of predicted nucleotide-binding domains
C0R09_RS00805	SM00840	C0R09_RS00805
C0R09_RS00810	SM00535	Ribonuclease III family
C0R09_RS00815	SM00967	RNA 2'-O ribose methyltransferase substrate binding
C0R09_RS00840	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
C0R09_RS00845	SM00649	Ribosomal protein L11/L12
C0R09_RS00875	SM00663	RNA polymerase I subunit A N-terminus
C0R09_RS00895	SM00838	Elongation factor G C-terminus
C0R09_RS00895	SM00889	Elongation factor G, domain IV
C0R09_RS00920	SM01403	C0R09_RS00920
C0R09_RS00940	SM01382	C0R09_RS00940
C0R09_RS00940	SM01383	C0R09_RS00940
C0R09_RS00955	SM00322	K homology RNA-binding domain
C0R09_RS00975	SM01374	C0R09_RS00975
C0R09_RS00980	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
C0R09_RS01040	SM00316	Ribosomal protein S1-like RNA-binding domain
C0R09_RS01060	SM00662	RNA polymerases D
C0R09_RS01070	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS01075	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS01105	SM00646	C0R09_RS01105
C0R09_RS01125	SM01251	C0R09_RS01125
C0R09_RS01300	SM00255	Toll - interleukin 1 - resistance
C0R09_RS01320	SM00860	SMI1 / KNR4 family
C0R09_RS01420	SM00833	Cobalamin synthesis protein cobW C-terminal domain
C0R09_RS01455	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS01515	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C0R09_RS01550	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C0R09_RS01560	SM00342	helix_turn_helix, arabinose operon control protein
C0R09_RS01590	SM00448	cheY-homologous receiver domain
C0R09_RS01590	SM00862	Transcriptional regulatory protein, C terminal
C0R09_RS01595	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C0R09_RS01595	SM00387	Histidine kinase-like ATPases
C0R09_RS01595	SM00388	His Kinase A (phosphoacceptor) domain
C0R09_RS01635	SM00347	helix_turn_helix multiple antibiotic resistance protein
C0R09_RS01640	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS01645	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS01660	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS01670	SM00240	Forkhead associated domain
C0R09_RS01670	SM00862	Transcriptional regulatory protein, C terminal
C0R09_RS01685	SM00346	helix_turn_helix isocitrate lyase regulation
C0R09_RS01710	SM00796	Allophanate hydrolase subunit 1
C0R09_RS01715	SM00797	Allophanate hydrolase subunit 2
C0R09_RS01740	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS01765	SM00450	Rhodanese Homology Domain
C0R09_RS01795	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C0R09_RS01795	SM00387	Histidine kinase-like ATPases
C0R09_RS01795	SM00388	His Kinase A (phosphoacceptor) domain
C0R09_RS01800	SM00448	cheY-homologous receiver domain
C0R09_RS01800	SM00862	Transcriptional regulatory protein, C terminal
C0R09_RS01830	SM00947	Carbonic anhydrase
C0R09_RS01840	SM00100	Cyclic nucleotide-monophosphate binding domain
C0R09_RS01840	SM00419	helix_turn_helix, cAMP Regulatory protein
C0R09_RS01980	SM00421	helix_turn_helix, Lux Regulon
C0R09_RS01980	SM00448	cheY-homologous receiver domain
C0R09_RS02015	SM00387	Histidine kinase-like ATPases
C0R09_RS02020	SM00421	helix_turn_helix, Lux Regulon
C0R09_RS02020	SM00448	cheY-homologous receiver domain
C0R09_RS02060	SM00450	Rhodanese Homology Domain
C0R09_RS02090	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS02095	SM00849	Metallo-beta-lactamase superfamily
C0R09_RS02110	SM00831	Cation transporter/ATPase, N-terminus
C0R09_RS02125	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS02125	SM00930	C0R09_RS02125
C0R09_RS02170	SM00646	C0R09_RS02170
C0R09_RS02185	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS02190	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C0R09_RS02210	SM01005	Alanine racemase, C-terminal domain
C0R09_RS02225	SM00316	Ribosomal protein S1-like RNA-binding domain
C0R09_RS02225	SM00732	Likely ribonuclease with RNase H fold.
C0R09_RS02240	SM00731	SprT homologues.
C0R09_RS02270	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS02280	SM00852	Probable molybdopterin binding domain
C0R09_RS02285	SM00852	Probable molybdopterin binding domain
C0R09_RS02315	SM00883	Chaperonin 10 Kd subunit
C0R09_RS02450	SM00460	Transglutaminase/protease-like homologues
C0R09_RS02465	SM01001	AIR carboxylase
C0R09_RS02475	SM00998	Adenylosuccinate lyase C-terminus
C0R09_RS02500	SM01211	C0R09_RS02500
C0R09_RS02530	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C0R09_RS02545	SM00798	AICARFT/IMPCHase bienzyme
C0R09_RS02545	SM00851	MGS-like domain
C0R09_RS02550	SM01209	C0R09_RS02550
C0R09_RS02550	SM01210	C0R09_RS02550
C0R09_RS02580	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS02585	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS02590	SM00636	C0R09_RS02590
C0R09_RS02595	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C0R09_RS02595	SM00387	Histidine kinase-like ATPases
C0R09_RS02595	SM00388	His Kinase A (phosphoacceptor) domain
C0R09_RS02600	SM00448	cheY-homologous receiver domain
C0R09_RS02600	SM00862	Transcriptional regulatory protein, C terminal
C0R09_RS02625	SM00278	Helix-hairpin-helix DNA-binding motif class 1
C0R09_RS02625	SM00292	breast cancer carboxy-terminal domain
C0R09_RS02625	SM00532	Ligase N family
C0R09_RS02645	SM00028	Tetratricopeptide repeats
C0R09_RS02645	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS02650	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C0R09_RS02685	SM00845	GatB domain
C0R09_RS02700	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS02730	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS02745	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS02760	SM00046	Diacylglycerol kinase catalytic domain (presumed)
C0R09_RS02835	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS02890	SM00822	C0R09_RS02890
C0R09_RS02955	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C0R09_RS02955	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C0R09_RS03010	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS03015	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS03020	SM00342	helix_turn_helix, arabinose operon control protein
C0R09_RS03035	SM00825	Beta-ketoacyl synthase
C0R09_RS03040	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS03170	SM00091	PAS domain
C0R09_RS03170	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS03255	SM00710	Parallel beta-helix repeats
C0R09_RS03270	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS03290	SM00899	C0R09_RS03290
C0R09_RS03305	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C0R09_RS03330	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C0R09_RS03375	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS03405	SM00636	C0R09_RS03405
C0R09_RS03420	SM00635	Bacterial Ig-like domain 2
C0R09_RS03450	SM00316	Ribosomal protein S1-like RNA-binding domain
C0R09_RS03470	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C0R09_RS03475	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS03485	SM00091	PAS domain
C0R09_RS03485	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS03555	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS03560	SM00363	S4 RNA-binding domain
C0R09_RS03600	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C0R09_RS03600	SM00387	Histidine kinase-like ATPases
C0R09_RS03600	SM00388	His Kinase A (phosphoacceptor) domain
C0R09_RS03605	SM00448	cheY-homologous receiver domain
C0R09_RS03605	SM00862	Transcriptional regulatory protein, C terminal
C0R09_RS03635	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C0R09_RS03635	SM00387	Histidine kinase-like ATPases
C0R09_RS03640	SM00421	helix_turn_helix, Lux Regulon
C0R09_RS03640	SM00448	cheY-homologous receiver domain
C0R09_RS03655	SM00646	C0R09_RS03655
C0R09_RS03685	SM00478	endonuclease III
C0R09_RS03710	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS03740	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS03795	SM00478	endonuclease III
C0R09_RS03795	SM00525	C0R09_RS03795
C0R09_RS03805	SM00636	C0R09_RS03805
C0R09_RS03900	SM00873	B3/4 domain
C0R09_RS03940	SM00857	Resolvase, N terminal domain
C0R09_RS03990	SM00641	Glycosyl hydrolases family 25
C0R09_RS04025	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS04030	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS04085	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
C0R09_RS04085	SM00091	PAS domain
C0R09_RS04085	SM00138	Methyltransferase, chemotaxis proteins 
C0R09_RS04085	SM00387	Histidine kinase-like ATPases
C0R09_RS04085	SM00388	His Kinase A (phosphoacceptor) domain
C0R09_RS04095	SM00052	Putative diguanylate phosphodiesterase
C0R09_RS04095	SM00267	diguanylate cyclase
C0R09_RS04170	SM00091	PAS domain
C0R09_RS04170	SM00387	Histidine kinase-like ATPases
C0R09_RS04175	SM00448	cheY-homologous receiver domain
C0R09_RS04200	SM00448	cheY-homologous receiver domain
C0R09_RS04200	SM00862	Transcriptional regulatory protein, C terminal
C0R09_RS04205	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C0R09_RS04205	SM00387	Histidine kinase-like ATPases
C0R09_RS04205	SM00388	His Kinase A (phosphoacceptor) domain
C0R09_RS04215	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS04230	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C0R09_RS04265	SM00060	Fibronectin type 3 domain
C0R09_RS04265	SM00495	Chitin-binding domain type 3
C0R09_RS04265	SM00636	C0R09_RS04265
C0R09_RS04285	SM00420	helix_turn_helix, Deoxyribose operon repressor
C0R09_RS04285	SM01134	C0R09_RS04285
C0R09_RS04340	SM00635	Bacterial Ig-like domain 2
C0R09_RS04345	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C0R09_RS04360	SM00487	DEAD-like helicases superfamily
C0R09_RS04360	SM00490	helicase superfamily c-terminal domain
C0R09_RS04375	SM00448	cheY-homologous receiver domain
C0R09_RS04375	SM00862	Transcriptional regulatory protein, C terminal
C0R09_RS04380	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C0R09_RS04380	SM00387	Histidine kinase-like ATPases
C0R09_RS04380	SM00388	His Kinase A (phosphoacceptor) domain
C0R09_RS04465	SM00116	Domain in cystathionine beta-synthase and other proteins.
C0R09_RS04480	SM00481	DNA polymerase alpha chain like domain
C0R09_RS04485	SM00919	Malic enzyme, NAD binding domain
C0R09_RS04485	SM01274	C0R09_RS04485
C0R09_RS04490	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C0R09_RS04490	SM00895	C0R09_RS04490
C0R09_RS04540	SM01329	C0R09_RS04540
C0R09_RS04550	SM00448	cheY-homologous receiver domain
C0R09_RS04550	SM00862	Transcriptional regulatory protein, C terminal
C0R09_RS04555	SM00091	PAS domain
C0R09_RS04555	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C0R09_RS04555	SM00387	Histidine kinase-like ATPases
C0R09_RS04555	SM00388	His Kinase A (phosphoacceptor) domain
C0R09_RS04575	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
C0R09_RS04575	SM00475	5'-3' exonuclease
C0R09_RS04575	SM00482	DNA polymerase A domain
C0R09_RS04580	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
C0R09_RS04580	SM01232	C0R09_RS04580
C0R09_RS04595	SM00342	helix_turn_helix, arabinose operon control protein
C0R09_RS04600	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
C0R09_RS04610	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C0R09_RS04650	SM00342	helix_turn_helix, arabinose operon control protein
C0R09_RS04665	SM00060	Fibronectin type 3 domain
C0R09_RS04665	SM00495	Chitin-binding domain type 3
C0R09_RS04670	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C0R09_RS04670	SM00866	C0R09_RS04670
C0R09_RS04685	SM00642	Alpha-amylase domain
C0R09_RS04690	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
C0R09_RS04690	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
C0R09_RS04690	SM00493	C0R09_RS04690
C0R09_RS04700	SM00823	Phosphopantetheine attachment site
C0R09_RS04705	SM00823	Phosphopantetheine attachment site
C0R09_RS04710	SM00823	Phosphopantetheine attachment site
C0R09_RS04715	SM00823	Phosphopantetheine attachment site
C0R09_RS04725	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS04740	SM00822	C0R09_RS04740
C0R09_RS04765	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS04830	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C0R09_RS04840	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C0R09_RS04875	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS04880	SM00448	cheY-homologous receiver domain
C0R09_RS04880	SM00862	Transcriptional regulatory protein, C terminal
C0R09_RS04885	SM00387	Histidine kinase-like ATPases
C0R09_RS04885	SM00388	His Kinase A (phosphoacceptor) domain
C0R09_RS04890	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS04900	SM00014	Acid phosphatase homologues
C0R09_RS04925	SM00347	helix_turn_helix multiple antibiotic resistance protein
C0R09_RS04935	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS04975	SM00155	Phospholipase D. Active site motifs.
C0R09_RS05055	SM00900	C0R09_RS05055
C0R09_RS05140	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS05215	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
C0R09_RS05215	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
C0R09_RS05230	SM00729	Elongator protein 3, MiaB family, Radical SAM
C0R09_RS05265	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS05295	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS05300	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS05325	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
C0R09_RS05390	SM00917	LeuA allosteric (dimerisation) domain
C0R09_RS05395	SM01329	C0R09_RS05395
C0R09_RS05415	SM00852	Probable molybdopterin binding domain
C0R09_RS05420	SM00729	Elongator protein 3, MiaB family, Radical SAM
C0R09_RS05450	SM00967	RNA 2'-O ribose methyltransferase substrate binding
C0R09_RS05460	SM00873	B3/4 domain
C0R09_RS05460	SM00874	tRNA synthetase B5 domain
C0R09_RS05460	SM00896	Ferredoxin-fold anticodon binding domain
C0R09_RS05475	SM00463	Small MutS-related domain
C0R09_RS05475	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
C0R09_RS05475	SM00534	ATPase domain of DNA mismatch repair MUTS family
C0R09_RS05485	SM00984	UDP binding domain
C0R09_RS05535	SM00220	Serine/Threonine protein kinases, catalytic domain
C0R09_RS05540	SM00327	von Willebrand factor (vWF) type A domain
C0R09_RS05555	SM00271	DnaJ molecular chaperone homology domain
C0R09_RS05570	SM00331	Sigma factor PP2C-like phosphatases
C0R09_RS05570	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
C0R09_RS05665	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS05710	SM00893	Electron transfer flavoprotein domain
C0R09_RS05715	SM00893	Electron transfer flavoprotein domain
C0R09_RS05730	SM00278	Helix-hairpin-helix DNA-binding motif class 1
C0R09_RS05730	SM00465	GIY-YIG type nucleases (URI domain)
C0R09_RS05805	SM01061	CAT RNA binding domain
C0R09_RS05825	SM00421	helix_turn_helix, Lux Regulon
C0R09_RS05835	SM00342	helix_turn_helix, arabinose operon control protein
C0R09_RS05925	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS05930	SM00411	bacterial (prokaryotic) histone like domain
C0R09_RS05945	SM00422	helix_turn_helix, mercury resistance
C0R09_RS05955	SM00909	Sporulation and spore germination
C0R09_RS05985	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS05985	SM00994	ClpX C4-type zinc finger
C0R09_RS05985	SM01086	C-terminal, D2-small domain, of ClpB protein
C0R09_RS05990	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS05995	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS05995	SM00464	Found in ATP-dependent protease La (LON)
C0R09_RS06040	SM01004	Delta-aminolevulinic acid dehydratase
C0R09_RS06070	SM00257	Lysin motif
C0R09_RS06135	SM00268	Actin
C0R09_RS06170	SM00357	Cold shock protein domain
C0R09_RS06185	SM00316	Ribosomal protein S1-like RNA-binding domain
C0R09_RS06205	SM01317	C0R09_RS06205
C0R09_RS06250	SM00257	Lysin motif
C0R09_RS06305	SM00278	Helix-hairpin-helix DNA-binding motif class 1
C0R09_RS06310	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS06325	SM01323	C0R09_RS06325
C0R09_RS06380	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C0R09_RS06380	SM00954	Region found in RelA / SpoT proteins
C0R09_RS06390	SM00287	Bacterial SH3 domain homologues
C0R09_RS06390	SM00646	C0R09_RS06390
C0R09_RS06395	SM00729	Elongator protein 3, MiaB family, Radical SAM
C0R09_RS06415	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS06430	SM00278	Helix-hairpin-helix DNA-binding motif class 1
C0R09_RS06455	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
C0R09_RS06465	SM00732	Likely ribonuclease with RNase H fold.
C0R09_RS06515	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C0R09_RS06515	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C0R09_RS06535	SM00857	Resolvase, N terminal domain
C0R09_RS06540	SM00857	Resolvase, N terminal domain
C0R09_RS06600	SM00567	E-Z type HEAT repeats
C0R09_RS06600	SM00932	Scaffold protein Nfu/NifU N terminal
C0R09_RS06665	SM01103	C0R09_RS06665
C0R09_RS06675	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C0R09_RS06700	SM00278	Helix-hairpin-helix DNA-binding motif class 1
C0R09_RS06715	SM00849	Metallo-beta-lactamase superfamily
C0R09_RS06765	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS06770	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS06825	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS06840	SM00838	Elongation factor G C-terminus
C0R09_RS06870	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS06875	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS06895	SM00966	SpoVT / AbrB like domain 
C0R09_RS06940	SM00482	DNA polymerase A domain
C0R09_RS07005	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS07015	SM00990	C0R09_RS07015
C0R09_RS07020	SM00487	DEAD-like helicases superfamily
C0R09_RS07165	SM00047	Lysozyme subfamily 2
C0R09_RS07165	SM00646	C0R09_RS07165
C0R09_RS07200	SM00470	ParB-like nuclease domain
C0R09_RS07210	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS07235	SM00729	Elongator protein 3, MiaB family, Radical SAM
C0R09_RS07255	SM00271	DnaJ molecular chaperone homology domain
C0R09_RS07270	SM00729	Elongator protein 3, MiaB family, Radical SAM
C0R09_RS07295	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
C0R09_RS07360	SM00704	CDGSH-type zinc finger. Function unknown.
C0R09_RS07410	SM00116	Domain in cystathionine beta-synthase and other proteins.
C0R09_RS07410	SM00420	helix_turn_helix, Deoxyribose operon repressor
C0R09_RS07420	SM00400	zinc finger
C0R09_RS07420	SM00493	C0R09_RS07420
C0R09_RS07460	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C0R09_RS07460	SM00245	tail specific protease
C0R09_RS07520	SM00729	Elongator protein 3, MiaB family, Radical SAM
C0R09_RS07550	SM00882	Coenzyme A transferase
C0R09_RS07555	SM00882	Coenzyme A transferase
C0R09_RS07735	SM00257	Lysin motif
C0R09_RS07785	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
C0R09_RS07785	SM00091	PAS domain
C0R09_RS07785	SM00387	Histidine kinase-like ATPases
C0R09_RS07785	SM00388	His Kinase A (phosphoacceptor) domain
C0R09_RS07790	SM00518	AP endonuclease family 2
C0R09_RS07800	SM00836	DALR anticodon binding domain
C0R09_RS07800	SM01016	Arginyl tRNA synthetase N terminal dom
C0R09_RS07815	SM01018	B12 binding domain
C0R09_RS07875	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS07880	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS07900	SM00450	Rhodanese Homology Domain
C0R09_RS07935	SM00347	helix_turn_helix multiple antibiotic resistance protein
C0R09_RS07950	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
C0R09_RS07950	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C0R09_RS07960	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C0R09_RS07970	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS07980	SM00857	Resolvase, N terminal domain
C0R09_RS08000	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C0R09_RS08080	SM00014	Acid phosphatase homologues
C0R09_RS08170	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS08270	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS08330	SM00116	Domain in cystathionine beta-synthase and other proteins.
C0R09_RS08335	SM00318	Staphylococcal nuclease homologues
C0R09_RS08410	SM00487	DEAD-like helicases superfamily
C0R09_RS08410	SM00490	helicase superfamily c-terminal domain
C0R09_RS08430	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C0R09_RS08535	SM00448	cheY-homologous receiver domain
C0R09_RS08535	SM00862	Transcriptional regulatory protein, C terminal
C0R09_RS08540	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C0R09_RS08540	SM00387	Histidine kinase-like ATPases
C0R09_RS08540	SM00388	His Kinase A (phosphoacceptor) domain
C0R09_RS08570	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS08610	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS08615	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS08645	SM00448	cheY-homologous receiver domain
C0R09_RS08645	SM00862	Transcriptional regulatory protein, C terminal
C0R09_RS08650	SM00387	Histidine kinase-like ATPases
C0R09_RS08665	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
C0R09_RS08670	SM01133	C0R09_RS08670
C0R09_RS08685	SM00529	Helix-turn-helix diphteria tox regulatory element
C0R09_RS08720	SM00841	Elongation factor P, C-terminal
C0R09_RS08720	SM01185	C0R09_RS08720
C0R09_RS08765	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS08810	SM00878	Biotin carboxylase C-terminal domain
C0R09_RS08810	SM01209	C0R09_RS08810
C0R09_RS08860	SM00861	Transketolase, pyrimidine binding domain
C0R09_RS08865	SM00363	S4 RNA-binding domain
C0R09_RS08945	SM00635	Bacterial Ig-like domain 2
C0R09_RS08975	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C0R09_RS08980	SM00448	cheY-homologous receiver domain
C0R09_RS08985	SM00341	Helicase and RNase D C-terminal
C0R09_RS09000	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C0R09_RS09000	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C0R09_RS09035	SM00448	cheY-homologous receiver domain
C0R09_RS09035	SM00862	Transcriptional regulatory protein, C terminal
C0R09_RS09040	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C0R09_RS09040	SM00387	Histidine kinase-like ATPases
C0R09_RS09040	SM00388	His Kinase A (phosphoacceptor) domain
C0R09_RS09060	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS09115	SM00091	PAS domain
C0R09_RS09115	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS09120	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
C0R09_RS09135	SM00861	Transketolase, pyrimidine binding domain
C0R09_RS09220	SM00346	helix_turn_helix isocitrate lyase regulation
C0R09_RS09230	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS09250	SM00344	helix_turn_helix ASNC type
C0R09_RS09265	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS09270	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS09275	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C0R09_RS09275	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C0R09_RS09280	SM00936	Penicillin-binding protein 5, C-terminal domain 
C0R09_RS09290	SM00387	Histidine kinase-like ATPases
C0R09_RS09355	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS09420	SM00422	helix_turn_helix, mercury resistance
C0R09_RS09430	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS09455	SM00850	LytTr DNA-binding domain
C0R09_RS09470	SM00347	helix_turn_helix multiple antibiotic resistance protein
C0R09_RS09495	SM00823	Phosphopantetheine attachment site
C0R09_RS09495	SM00824	Thioesterase
C0R09_RS09505	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS09550	SM00363	S4 RNA-binding domain
C0R09_RS09570	SM00448	cheY-homologous receiver domain
C0R09_RS09570	SM00862	Transcriptional regulatory protein, C terminal
C0R09_RS09575	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C0R09_RS09575	SM00387	Histidine kinase-like ATPases
C0R09_RS09575	SM00388	His Kinase A (phosphoacceptor) domain
C0R09_RS09625	SM00487	DEAD-like helicases superfamily
C0R09_RS09625	SM00490	helicase superfamily c-terminal domain
C0R09_RS09635	SM00257	Lysin motif
C0R09_RS09655	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
C0R09_RS09660	SM00870	C0R09_RS09660
C0R09_RS09695	SM00563	Phosphate acyltransferases
C0R09_RS09700	SM00316	Ribosomal protein S1-like RNA-binding domain
C0R09_RS09725	SM01207	C0R09_RS09725
C0R09_RS09770	SM00411	bacterial (prokaryotic) histone like domain
C0R09_RS09780	SM00108	Bulb-type mannose-specific lectin
C0R09_RS09840	SM00861	Transketolase, pyrimidine binding domain
C0R09_RS09900	SM00562	C0R09_RS09900
C0R09_RS09905	SM00138	Methyltransferase, chemotaxis proteins 
C0R09_RS09990	SM00028	Tetratricopeptide repeats
C0R09_RS10005	SM00914	C0R09_RS10005
C0R09_RS10055	SM00851	MGS-like domain
C0R09_RS10095	SM00028	Tetratricopeptide repeats
C0R09_RS10100	SM00479	C0R09_RS10100
C0R09_RS10100	SM00487	DEAD-like helicases superfamily
C0R09_RS10100	SM00488	C0R09_RS10100
C0R09_RS10100	SM00491	C0R09_RS10100
C0R09_RS10110	SM00881	CoA binding domain
C0R09_RS10140	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS10175	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS10220	SM00984	UDP binding domain
C0R09_RS10255	SM00829	Enoylreductase
C0R09_RS10280	SM00849	Metallo-beta-lactamase superfamily
C0R09_RS10285	SM00247	Beta/gamma crystallins
C0R09_RS10350	SM01298	C0R09_RS10350
C0R09_RS10370	SM00347	helix_turn_helix multiple antibiotic resistance protein
C0R09_RS10395	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C0R09_RS10470	SM00091	PAS domain
C0R09_RS10470	SM00387	Histidine kinase-like ATPases
C0R09_RS10475	SM00448	cheY-homologous receiver domain
C0R09_RS10515	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
C0R09_RS10520	SM00822	C0R09_RS10520
C0R09_RS10520	SM00823	Phosphopantetheine attachment site
C0R09_RS10520	SM00825	Beta-ketoacyl synthase
C0R09_RS10520	SM00826	C0R09_RS10520
C0R09_RS10525	SM00822	C0R09_RS10525
C0R09_RS10525	SM00823	Phosphopantetheine attachment site
C0R09_RS10525	SM00825	Beta-ketoacyl synthase
C0R09_RS10525	SM00829	Enoylreductase
C0R09_RS10525	SM01294	C0R09_RS10525
C0R09_RS10530	SM00822	C0R09_RS10530
C0R09_RS10530	SM00823	Phosphopantetheine attachment site
C0R09_RS10530	SM00825	Beta-ketoacyl synthase
C0R09_RS10530	SM01294	C0R09_RS10530
C0R09_RS10535	SM00822	C0R09_RS10535
C0R09_RS10535	SM00823	Phosphopantetheine attachment site
C0R09_RS10535	SM01294	C0R09_RS10535
C0R09_RS10720	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
C0R09_RS10770	SM00560	LamG-like jellyroll fold domain
C0R09_RS10840	SM00342	helix_turn_helix, arabinose operon control protein
C0R09_RS10895	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C0R09_RS10895	SM00866	C0R09_RS10895
C0R09_RS10955	SM00342	helix_turn_helix, arabinose operon control protein
C0R09_RS10975	SM00420	helix_turn_helix, Deoxyribose operon repressor
C0R09_RS11055	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS11065	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
C0R09_RS11065	SM00475	5'-3' exonuclease
C0R09_RS11110	SM00855	Phosphoglycerate mutase family
C0R09_RS11125	SM00954	Region found in RelA / SpoT proteins
C0R09_RS11150	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C0R09_RS11165	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C0R09_RS11165	SM00895	C0R09_RS11165
C0R09_RS11175	SM00478	endonuclease III
C0R09_RS11180	SM00342	helix_turn_helix, arabinose operon control protein
C0R09_RS11195	SM00729	Elongator protein 3, MiaB family, Radical SAM
C0R09_RS11205	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
C0R09_RS11215	SM00347	helix_turn_helix multiple antibiotic resistance protein
C0R09_RS11240	SM00421	helix_turn_helix, Lux Regulon
C0R09_RS11250	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS11330	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
C0R09_RS11335	SM00849	Metallo-beta-lactamase superfamily
C0R09_RS11345	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS11360	SM00342	helix_turn_helix, arabinose operon control protein
C0R09_RS11370	SM01120	C0R09_RS11370
C0R09_RS11485	SM00060	Fibronectin type 3 domain
C0R09_RS11565	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C0R09_RS11565	SM00387	Histidine kinase-like ATPases
C0R09_RS11565	SM00388	His Kinase A (phosphoacceptor) domain
C0R09_RS11570	SM00448	cheY-homologous receiver domain
C0R09_RS11570	SM00862	Transcriptional regulatory protein, C terminal
C0R09_RS11580	SM00248	ankyrin repeats
C0R09_RS11605	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C0R09_RS11605	SM00895	C0R09_RS11605
C0R09_RS11635	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
C0R09_RS11815	SM00100	Cyclic nucleotide-monophosphate binding domain
C0R09_RS11815	SM00419	helix_turn_helix, cAMP Regulatory protein
C0R09_RS11830	SM00823	Phosphopantetheine attachment site
C0R09_RS11835	SM00822	C0R09_RS11835
C0R09_RS11835	SM00823	Phosphopantetheine attachment site
C0R09_RS11835	SM00825	Beta-ketoacyl synthase
C0R09_RS11835	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
C0R09_RS11845	SM00823	Phosphopantetheine attachment site
C0R09_RS11910	SM00823	Phosphopantetheine attachment site
C0R09_RS11910	SM00824	Thioesterase
C0R09_RS11925	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS11940	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS11950	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS11955	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS11960	SM00823	Phosphopantetheine attachment site
C0R09_RS11965	SM00823	Phosphopantetheine attachment site
C0R09_RS11975	SM00829	Enoylreductase
C0R09_RS11995	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C0R09_RS12070	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS12110	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS12115	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS12120	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS12130	SM00822	C0R09_RS12130
C0R09_RS12130	SM00823	Phosphopantetheine attachment site
C0R09_RS12130	SM00825	Beta-ketoacyl synthase
C0R09_RS12140	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
C0R09_RS12145	SM00823	Phosphopantetheine attachment site
C0R09_RS12160	SM00644	C0R09_RS12160
C0R09_RS12180	SM00849	Metallo-beta-lactamase superfamily
C0R09_RS12235	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C0R09_RS12235	SM00895	C0R09_RS12235
C0R09_RS12260	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS12350	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C0R09_RS12350	SM00387	Histidine kinase-like ATPases
C0R09_RS12350	SM00388	His Kinase A (phosphoacceptor) domain
C0R09_RS12355	SM00448	cheY-homologous receiver domain
C0R09_RS12355	SM00862	Transcriptional regulatory protein, C terminal
C0R09_RS12385	SM00823	Phosphopantetheine attachment site
C0R09_RS12390	SM00823	Phosphopantetheine attachment site
C0R09_RS12390	SM01294	C0R09_RS12390
C0R09_RS12395	SM00823	Phosphopantetheine attachment site
C0R09_RS12400	SM00822	C0R09_RS12400
C0R09_RS12400	SM00823	Phosphopantetheine attachment site
C0R09_RS12440	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS12500	SM00877	C0R09_RS12500
C0R09_RS12510	SM00877	C0R09_RS12510
C0R09_RS12515	SM00877	C0R09_RS12515
C0R09_RS12540	SM00877	C0R09_RS12540
C0R09_RS12555	SM00831	Cation transporter/ATPase, N-terminus
C0R09_RS12575	SM00342	helix_turn_helix, arabinose operon control protein
C0R09_RS12575	SM00871	Bacterial transcription activator, effector binding domain
C0R09_RS12605	SM00849	Metallo-beta-lactamase superfamily
C0R09_RS12610	SM00829	Enoylreductase
C0R09_RS12625	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C0R09_RS12625	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
C0R09_RS12640	SM00823	Phosphopantetheine attachment site
C0R09_RS12645	SM00823	Phosphopantetheine attachment site
C0R09_RS12650	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS12655	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS12680	SM00487	DEAD-like helicases superfamily
C0R09_RS12680	SM00490	helicase superfamily c-terminal domain
C0R09_RS12715	SM00860	SMI1 / KNR4 family
C0R09_RS12735	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C0R09_RS12785	SM01091	Transporter associated domain
C0R09_RS12790	SM00422	helix_turn_helix, mercury resistance
C0R09_RS12820	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
C0R09_RS12835	SM01007	Class II Aldolase and Adducin N-terminal domain
C0R09_RS12845	SM00420	helix_turn_helix, Deoxyribose operon repressor
C0R09_RS12845	SM01134	C0R09_RS12845
C0R09_RS12875	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS12980	SM00487	DEAD-like helicases superfamily
C0R09_RS12980	SM00490	helicase superfamily c-terminal domain
C0R09_RS13000	SM01133	C0R09_RS13000
C0R09_RS13005	SM00855	Phosphoglycerate mutase family
C0R09_RS13070	SM00823	Phosphopantetheine attachment site
C0R09_RS13070	SM00825	Beta-ketoacyl synthase
C0R09_RS13095	SM00822	C0R09_RS13095
C0R09_RS13095	SM00823	Phosphopantetheine attachment site
C0R09_RS13095	SM00825	Beta-ketoacyl synthase
C0R09_RS13095	SM00826	C0R09_RS13095
C0R09_RS13100	SM00823	Phosphopantetheine attachment site
C0R09_RS13105	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
C0R09_RS13115	SM00822	C0R09_RS13115
C0R09_RS13160	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS13170	SM00881	CoA binding domain
C0R09_RS13185	SM00861	Transketolase, pyrimidine binding domain
C0R09_RS13205	SM00877	C0R09_RS13205
C0R09_RS13230	SM00877	C0R09_RS13230
C0R09_RS13240	SM00877	C0R09_RS13240
C0R09_RS13245	SM00877	C0R09_RS13245
C0R09_RS13270	SM00448	cheY-homologous receiver domain
C0R09_RS13270	SM01012	C0R09_RS13270
C0R09_RS13280	SM00877	C0R09_RS13280
C0R09_RS13305	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS13320	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C0R09_RS13320	SM00387	Histidine kinase-like ATPases
C0R09_RS13320	SM00388	His Kinase A (phosphoacceptor) domain
C0R09_RS13325	SM00448	cheY-homologous receiver domain
C0R09_RS13325	SM00862	Transcriptional regulatory protein, C terminal
C0R09_RS13375	SM00636	C0R09_RS13375
C0R09_RS13375	SM00637	C0R09_RS13375
C0R09_RS13375	SM01063	Carbohydrate binding domain CBM49
C0R09_RS13405	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C0R09_RS13415	SM00100	Cyclic nucleotide-monophosphate binding domain
C0R09_RS13415	SM00419	helix_turn_helix, cAMP Regulatory protein
C0R09_RS13425	SM00729	Elongator protein 3, MiaB family, Radical SAM
C0R09_RS13445	SM00257	Lysin motif
C0R09_RS13445	SM00636	C0R09_RS13445
C0R09_RS13460	SM00448	cheY-homologous receiver domain
C0R09_RS13460	SM00862	Transcriptional regulatory protein, C terminal
C0R09_RS13465	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C0R09_RS13465	SM00387	Histidine kinase-like ATPases
C0R09_RS13465	SM00388	His Kinase A (phosphoacceptor) domain
C0R09_RS13470	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
C0R09_RS13550	SM00387	Histidine kinase-like ATPases
C0R09_RS13550	SM00388	His Kinase A (phosphoacceptor) domain
C0R09_RS13560	SM00731	SprT homologues.
C0R09_RS13580	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
C0R09_RS13580	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C0R09_RS13580	SM00387	Histidine kinase-like ATPases
C0R09_RS13580	SM00388	His Kinase A (phosphoacceptor) domain
C0R09_RS13610	SM00849	Metallo-beta-lactamase superfamily
C0R09_RS13640	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
C0R09_RS13660	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
C0R09_RS13670	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS13685	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS13790	SM00342	helix_turn_helix, arabinose operon control protein
C0R09_RS13800	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS13835	SM00487	DEAD-like helicases superfamily
C0R09_RS13835	SM00490	helicase superfamily c-terminal domain
C0R09_RS13840	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS13905	SM00028	Tetratricopeptide repeats
C0R09_RS14010	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS14060	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS14080	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS14095	SM00434	DNA Topoisomerase IV
C0R09_RS14100	SM00387	Histidine kinase-like ATPases
C0R09_RS14100	SM00433	TopoisomeraseII
C0R09_RS14130	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS14160	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS14165	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS14195	SM00347	helix_turn_helix multiple antibiotic resistance protein
C0R09_RS14295	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS14335	SM00487	DEAD-like helicases superfamily
C0R09_RS14335	SM00490	helicase superfamily c-terminal domain
C0R09_RS14345	SM00226	Low molecular weight phosphatase family
C0R09_RS14380	SM00861	Transketolase, pyrimidine binding domain
C0R09_RS14490	SM00047	Lysozyme subfamily 2
C0R09_RS14575	SM00257	Lysin motif
C0R09_RS14605	SM00829	Enoylreductase
C0R09_RS14630	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS14635	SM00458	Ricin-type beta-trefoil
C0R09_RS14635	SM00758	C0R09_RS14635
C0R09_RS14695	SM00646	C0R09_RS14695
C0R09_RS14700	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C0R09_RS14700	SM00387	Histidine kinase-like ATPases
C0R09_RS14700	SM00388	His Kinase A (phosphoacceptor) domain
C0R09_RS14705	SM00448	cheY-homologous receiver domain
C0R09_RS14705	SM00862	Transcriptional regulatory protein, C terminal
C0R09_RS14720	SM00823	Phosphopantetheine attachment site
C0R09_RS14745	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C0R09_RS14750	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS14790	SM00458	Ricin-type beta-trefoil
C0R09_RS14790	SM00758	C0R09_RS14790
C0R09_RS14835	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C0R09_RS14835	SM00387	Histidine kinase-like ATPases
C0R09_RS14835	SM00388	His Kinase A (phosphoacceptor) domain
C0R09_RS14840	SM00448	cheY-homologous receiver domain
C0R09_RS14840	SM00862	Transcriptional regulatory protein, C terminal
C0R09_RS14850	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS14915	SM01266	C0R09_RS14915
C0R09_RS14930	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS14935	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS14960	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS15045	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C0R09_RS15055	SM00612	C0R09_RS15055
C0R09_RS15065	SM00047	Lysozyme subfamily 2
C0R09_RS15090	SM00823	Phosphopantetheine attachment site
C0R09_RS15185	SM01230	C0R09_RS15185
C0R09_RS15190	SM00422	helix_turn_helix, mercury resistance
C0R09_RS15210	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS15225	SM00342	helix_turn_helix, arabinose operon control protein
C0R09_RS15245	SM00420	helix_turn_helix, Deoxyribose operon repressor
C0R09_RS15245	SM01134	C0R09_RS15245
C0R09_RS15270	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS15290	SM00612	C0R09_RS15290
C0R09_RS15305	SM00028	Tetratricopeptide repeats
C0R09_RS15305	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS15310	SM00612	C0R09_RS15310
C0R09_RS15320	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS15340	SM00853	MutL C terminal dimerisation domain
C0R09_RS15340	SM01340	C0R09_RS15340
C0R09_RS15345	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
C0R09_RS15345	SM00534	ATPase domain of DNA mismatch repair MUTS family
C0R09_RS15365	SM00729	Elongator protein 3, MiaB family, Radical SAM
C0R09_RS15375	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS15385	SM00793	Accessory gene regulator B
C0R09_RS15445	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS15455	SM00563	Phosphate acyltransferases
C0R09_RS15490	SM00849	Metallo-beta-lactamase superfamily
C0R09_RS15520	SM00322	K homology RNA-binding domain
C0R09_RS15520	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C0R09_RS15530	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS15535	SM00487	DEAD-like helicases superfamily
C0R09_RS15535	SM00490	helicase superfamily c-terminal domain
C0R09_RS15540	SM00852	Probable molybdopterin binding domain
C0R09_RS15550	SM00729	Elongator protein 3, MiaB family, Radical SAM
C0R09_RS15585	SM00257	Lysin motif
C0R09_RS15600	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS15610	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS15610	SM00843	C0R09_RS15610
C0R09_RS15650	SM00849	Metallo-beta-lactamase superfamily
C0R09_RS15655	SM01130	C0R09_RS15655
C0R09_RS15665	SM00859	Semialdehyde dehydrogenase, NAD binding domain
C0R09_RS15700	SM00316	Ribosomal protein S1-like RNA-binding domain
C0R09_RS15700	SM00322	K homology RNA-binding domain
C0R09_RS15705	SM01387	C0R09_RS15705
C0R09_RS15710	SM00904	Riboflavin kinase
C0R09_RS15750	SM00316	Ribosomal protein S1-like RNA-binding domain
C0R09_RS15750	SM00322	K homology RNA-binding domain
C0R09_RS15765	SM00479	C0R09_RS15765
C0R09_RS15765	SM00481	DNA polymerase alpha chain like domain
C0R09_RS15780	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C0R09_RS15860	SM00260	Two component signalling adaptor domain
C0R09_RS15865	SM00073	Histidine Phosphotransfer domain
C0R09_RS15865	SM00260	Two component signalling adaptor domain
C0R09_RS15865	SM00387	Histidine kinase-like ATPases
C0R09_RS15865	SM01231	C0R09_RS15865
C0R09_RS15870	SM00448	cheY-homologous receiver domain
C0R09_RS15880	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS15880	SM00962	SRP54-type protein, GTPase domain
C0R09_RS15915	SM00448	cheY-homologous receiver domain
C0R09_RS15965	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS16005	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS16005	SM01086	C-terminal, D2-small domain, of ClpB protein
C0R09_RS16025	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
C0R09_RS16025	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
C0R09_RS16025	SM00493	C0R09_RS16025
C0R09_RS16035	SM00881	CoA binding domain
C0R09_RS16060	SM00564	beta-propeller repeat
C0R09_RS16065	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS16070	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS16075	SM00966	SpoVT / AbrB like domain 
C0R09_RS16140	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS16140	SM00962	SRP54-type protein, GTPase domain
C0R09_RS16140	SM00963	SRP54-type protein, helical bundle domain
C0R09_RS16150	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS16150	SM00962	SRP54-type protein, GTPase domain
C0R09_RS16150	SM00963	SRP54-type protein, helical bundle domain
C0R09_RS16155	SM00968	SMC proteins Flexible Hinge Domain
C0R09_RS16160	SM00358	Double-stranded RNA binding motif
C0R09_RS16160	SM00535	Ribonuclease III family
C0R09_RS16165	SM00825	Beta-ketoacyl synthase
C0R09_RS16175	SM00822	C0R09_RS16175
C0R09_RS16180	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
C0R09_RS16215	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C0R09_RS16240	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
C0R09_RS16290	SM00267	diguanylate cyclase
C0R09_RS16300	SM00347	helix_turn_helix multiple antibiotic resistance protein
C0R09_RS16305	SM00267	diguanylate cyclase
C0R09_RS16305	SM00448	cheY-homologous receiver domain
C0R09_RS16345	SM00954	Region found in RelA / SpoT proteins
C0R09_RS16370	SM00347	helix_turn_helix multiple antibiotic resistance protein
C0R09_RS16395	SM00487	DEAD-like helicases superfamily
C0R09_RS16395	SM00490	helicase superfamily c-terminal domain
C0R09_RS16450	SM01120	C0R09_RS16450
C0R09_RS16450	SM01121	C0R09_RS16450
C0R09_RS16470	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
C0R09_RS16475	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS16485	SM00062	Bacterial periplasmic substrate-binding proteins
C0R09_RS16485	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
C0R09_RS16500	SM00220	Serine/Threonine protein kinases, catalytic domain
C0R09_RS16500	SM00740	C0R09_RS16500
C0R09_RS16505	SM00331	Sigma factor PP2C-like phosphatases
C0R09_RS16505	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
C0R09_RS16530	SM00487	DEAD-like helicases superfamily
C0R09_RS16530	SM00490	helicase superfamily c-terminal domain
C0R09_RS16545	SM00915	Jacalin-like lectin domain
C0R09_RS16550	SM01409	C0R09_RS16550
C0R09_RS16555	SM00072	Guanylate kinase homologues.
C0R09_RS16640	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
C0R09_RS16645	SM00851	MGS-like domain
C0R09_RS16645	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
C0R09_RS16645	SM01209	C0R09_RS16645
C0R09_RS16650	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
C0R09_RS16675	SM00363	S4 RNA-binding domain
C0R09_RS16715	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
C0R09_RS16715	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
C0R09_RS16715	SM00493	C0R09_RS16715
C0R09_RS16750	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS16755	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS16775	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
C0R09_RS16795	SM00363	S4 RNA-binding domain
C0R09_RS16840	SM00864	Tubulin/FtsZ family, GTPase domain
C0R09_RS16840	SM00865	Tubulin/FtsZ family, C-terminal domain
C0R09_RS16845	SM00842	Cell division protein FtsA
C0R09_RS16905	SM00740	C0R09_RS16905
C0R09_RS16910	SM00740	C0R09_RS16910
C0R09_RS16930	SM00996	S-adenosyl-L-homocysteine hydrolase
C0R09_RS16930	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
C0R09_RS16950	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS16990	SM00878	Biotin carboxylase C-terminal domain
C0R09_RS17040	SM00849	Metallo-beta-lactamase superfamily
C0R09_RS17060	SM00670	Large family of predicted nucleotide-binding domains
C0R09_RS17075	SM00028	Tetratricopeptide repeats
C0R09_RS17075	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS17080	SM00028	Tetratricopeptide repeats
C0R09_RS17080	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS17110	SM00518	AP endonuclease family 2
C0R09_RS17190	SM00347	helix_turn_helix multiple antibiotic resistance protein
C0R09_RS17200	SM00047	Lysozyme subfamily 2
C0R09_RS17245	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS17255	SM00062	Bacterial periplasmic substrate-binding proteins
C0R09_RS17405	SM00318	Staphylococcal nuclease homologues
C0R09_RS17455	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS17495	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS17505	SM00342	helix_turn_helix, arabinose operon control protein
C0R09_RS17505	SM00871	Bacterial transcription activator, effector binding domain
C0R09_RS17530	SM00871	Bacterial transcription activator, effector binding domain
C0R09_RS17565	SM00646	C0R09_RS17565
C0R09_RS17690	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS17700	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS17705	SM00387	Histidine kinase-like ATPases
C0R09_RS17710	SM00448	cheY-homologous receiver domain
C0R09_RS17710	SM00862	Transcriptional regulatory protein, C terminal
C0R09_RS17750	SM00347	helix_turn_helix multiple antibiotic resistance protein
C0R09_RS17760	SM00421	helix_turn_helix, Lux Regulon
C0R09_RS17760	SM00448	cheY-homologous receiver domain
C0R09_RS17805	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS17810	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS17815	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS17850	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS17865	SM01131	C0R09_RS17865
C0R09_RS17870	SM00854	Bacterial capsule synthesis protein PGA_cap
C0R09_RS17980	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS18000	SM00342	helix_turn_helix, arabinose operon control protein
C0R09_RS18025	SM00327	von Willebrand factor (vWF) type A domain
C0R09_RS18060	SM00823	Phosphopantetheine attachment site
C0R09_RS18070	SM00859	Semialdehyde dehydrogenase, NAD binding domain
C0R09_RS18075	SM00823	Phosphopantetheine attachment site
C0R09_RS18100	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS18105	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS18110	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS18115	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C0R09_RS18115	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C0R09_RS18115	SM01049	C0R09_RS18115
C0R09_RS18140	SM00835	Cupin
C0R09_RS18155	SM00849	Metallo-beta-lactamase superfamily
C0R09_RS18160	SM00849	Metallo-beta-lactamase superfamily
C0R09_RS18190	SM00287	Bacterial SH3 domain homologues
C0R09_RS18245	SM00612	C0R09_RS18245
C0R09_RS18265	SM00047	Lysozyme subfamily 2
C0R09_RS18325	SM00257	Lysin motif
C0R09_RS18470	SM00507	HNH nucleases
C0R09_RS18505	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS18525	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS18530	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS18560	SM00047	Lysozyme subfamily 2
C0R09_RS18620	SM00257	Lysin motif
C0R09_RS18715	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS18805	SM00479	C0R09_RS18805
C0R09_RS18815	SM00380	DNA-binding domain in plant proteins such as APETALA2 and EREBPs
C0R09_RS18820	SM00474	3'-5' exonuclease
C0R09_RS18820	SM00482	DNA polymerase A domain
C0R09_RS18855	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS18860	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS18975	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C0R09_RS18975	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C0R09_RS19010	SM00481	DNA polymerase alpha chain like domain
C0R09_RS19020	SM00116	Domain in cystathionine beta-synthase and other proteins.
C0R09_RS19020	SM01091	Transporter associated domain
C0R09_RS19060	SM00823	Phosphopantetheine attachment site
C0R09_RS19065	SM00260	Two component signalling adaptor domain
C0R09_RS19105	SM00116	Domain in cystathionine beta-synthase and other proteins.
C0R09_RS19105	SM01091	Transporter associated domain
C0R09_RS19110	SM00487	DEAD-like helicases superfamily
C0R09_RS19110	SM00490	helicase superfamily c-terminal domain
C0R09_RS19130	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS19155	SM00849	Metallo-beta-lactamase superfamily
C0R09_RS19235	SM00448	cheY-homologous receiver domain
C0R09_RS19235	SM00862	Transcriptional regulatory protein, C terminal
C0R09_RS19240	SM00387	Histidine kinase-like ATPases
C0R09_RS19240	SM00388	His Kinase A (phosphoacceptor) domain
C0R09_RS19285	SM00014	Acid phosphatase homologues
C0R09_RS19325	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS19365	SM00116	Domain in cystathionine beta-synthase and other proteins.
C0R09_RS19365	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS19375	SM00903	Flavin reductase like domain
C0R09_RS19415	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS19420	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS19440	SM00878	Biotin carboxylase C-terminal domain
C0R09_RS19475	SM00387	Histidine kinase-like ATPases
C0R09_RS19475	SM00388	His Kinase A (phosphoacceptor) domain
C0R09_RS19570	SM00981	C0R09_RS19570
C0R09_RS19625	SM00822	C0R09_RS19625
C0R09_RS19695	SM00849	Metallo-beta-lactamase superfamily
C0R09_RS19700	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
C0R09_RS19700	SM00267	diguanylate cyclase
C0R09_RS19705	SM00855	Phosphoglycerate mutase family
C0R09_RS19715	SM00363	S4 RNA-binding domain
C0R09_RS19715	SM01390	C0R09_RS19715
C0R09_RS19720	SM00060	Fibronectin type 3 domain
C0R09_RS19730	SM00116	Domain in cystathionine beta-synthase and other proteins.
C0R09_RS19755	SM00354	helix_turn _helix lactose operon repressor
C0R09_RS19760	SM00830	Chorismate mutase type II
C0R09_RS19765	SM00842	Cell division protein FtsA
C0R09_RS19835	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS19855	SM00347	helix_turn_helix multiple antibiotic resistance protein
C0R09_RS19905	SM00346	helix_turn_helix isocitrate lyase regulation
C0R09_RS19915	SM00843	C0R09_RS19915
C0R09_RS19925	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C0R09_RS19990	SM00861	Transketolase, pyrimidine binding domain
C0R09_RS20025	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS20110	SM00347	helix_turn_helix multiple antibiotic resistance protein
C0R09_RS20120	SM00487	DEAD-like helicases superfamily
C0R09_RS20120	SM00490	helicase superfamily c-terminal domain
C0R09_RS20130	SM00954	Region found in RelA / SpoT proteins
C0R09_RS20165	SM00917	LeuA allosteric (dimerisation) domain
C0R09_RS20180	SM00357	Cold shock protein domain
C0R09_RS20250	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
C0R09_RS20250	SM00091	PAS domain
C0R09_RS20250	SM00387	Histidine kinase-like ATPases
C0R09_RS20250	SM00388	His Kinase A (phosphoacceptor) domain
C0R09_RS20255	SM00091	PAS domain
C0R09_RS20255	SM00387	Histidine kinase-like ATPases
C0R09_RS20255	SM00388	His Kinase A (phosphoacceptor) domain
C0R09_RS20290	SM00354	helix_turn _helix lactose operon repressor
C0R09_RS20305	SM00420	helix_turn_helix, Deoxyribose operon repressor
C0R09_RS20305	SM01134	C0R09_RS20305
C0R09_RS20350	SM01061	CAT RNA binding domain
C0R09_RS20375	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS20390	SM00354	helix_turn _helix lactose operon repressor
C0R09_RS20410	SM00342	helix_turn_helix, arabinose operon control protein
C0R09_RS20450	SM00854	Bacterial capsule synthesis protein PGA_cap
C0R09_RS20485	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS20515	SM00881	CoA binding domain
C0R09_RS20620	SM00052	Putative diguanylate phosphodiesterase
C0R09_RS20620	SM00267	diguanylate cyclase
C0R09_RS20680	SM00420	helix_turn_helix, Deoxyribose operon repressor
C0R09_RS20710	SM00729	Elongator protein 3, MiaB family, Radical SAM
C0R09_RS20745	SM00450	Rhodanese Homology Domain
C0R09_RS20745	SM00849	Metallo-beta-lactamase superfamily
C0R09_RS20750	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C0R09_RS20795	SM00244	prohibitin homologues
C0R09_RS20880	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS20910	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C0R09_RS20910	SM00387	Histidine kinase-like ATPases
C0R09_RS20910	SM00388	His Kinase A (phosphoacceptor) domain
C0R09_RS20915	SM00448	cheY-homologous receiver domain
C0R09_RS20915	SM00862	Transcriptional regulatory protein, C terminal
C0R09_RS20980	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS20985	SM01005	Alanine racemase, C-terminal domain
C0R09_RS21040	SM01007	Class II Aldolase and Adducin N-terminal domain
C0R09_RS21070	SM00354	helix_turn _helix lactose operon repressor
C0R09_RS21100	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
C0R09_RS21165	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
C0R09_RS21165	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
C0R09_RS21195	SM00316	Ribosomal protein S1-like RNA-binding domain
C0R09_RS21215	SM00882	Coenzyme A transferase
C0R09_RS21220	SM00882	Coenzyme A transferase
C0R09_RS21295	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS21320	SM00822	C0R09_RS21320
C0R09_RS21330	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS21340	SM00422	helix_turn_helix, mercury resistance
C0R09_RS21340	SM00871	Bacterial transcription activator, effector binding domain
C0R09_RS21445	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS21450	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS21470	SM00387	Histidine kinase-like ATPases
C0R09_RS21470	SM00388	His Kinase A (phosphoacceptor) domain
C0R09_RS21475	SM00448	cheY-homologous receiver domain
C0R09_RS21475	SM00862	Transcriptional regulatory protein, C terminal
C0R09_RS21590	SM00316	Ribosomal protein S1-like RNA-binding domain
C0R09_RS21590	SM00357	Cold shock protein domain
C0R09_RS21590	SM00955	C0R09_RS21590
C0R09_RS21610	SM01192	C0R09_RS21610
C0R09_RS21610	SM01193	C0R09_RS21610
C0R09_RS21630	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
C0R09_RS21720	SM00028	Tetratricopeptide repeats
C0R09_RS21815	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS21820	SM00487	DEAD-like helicases superfamily
C0R09_RS21820	SM00490	helicase superfamily c-terminal domain
C0R09_RS21830	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C0R09_RS21835	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C0R09_RS21835	SM00245	tail specific protease
C0R09_RS21850	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS21870	SM00851	MGS-like domain
C0R09_RS21870	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
C0R09_RS21870	SM01209	C0R09_RS21870
C0R09_RS21875	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
C0R09_RS21890	SM00859	Semialdehyde dehydrogenase, NAD binding domain
C0R09_RS21915	SM00448	cheY-homologous receiver domain
C0R09_RS21915	SM00862	Transcriptional regulatory protein, C terminal
C0R09_RS21920	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C0R09_RS21920	SM00387	Histidine kinase-like ATPases
C0R09_RS21920	SM00388	His Kinase A (phosphoacceptor) domain
C0R09_RS21925	SM00155	Phospholipase D. Active site motifs.
C0R09_RS21930	SM00957	SecA DEAD-like domain
C0R09_RS21930	SM00958	SecA preprotein cross-linking domain
C0R09_RS21940	SM00357	Cold shock protein domain
C0R09_RS22045	SM00487	DEAD-like helicases superfamily
C0R09_RS22045	SM00490	helicase superfamily c-terminal domain
C0R09_RS22055	SM00421	helix_turn_helix, Lux Regulon
C0R09_RS22055	SM00448	cheY-homologous receiver domain
C0R09_RS22060	SM00387	Histidine kinase-like ATPases
C0R09_RS22190	SM00344	helix_turn_helix ASNC type
C0R09_RS22280	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS22360	SM00226	Low molecular weight phosphatase family
C0R09_RS22385	SM00937	C0R09_RS22385
C0R09_RS22410	SM00257	Lysin motif
C0R09_RS22415	SM00357	Cold shock protein domain
C0R09_RS22415	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS22415	SM00959	Rho termination factor, N-terminal domain
C0R09_RS22440	SM00448	cheY-homologous receiver domain
C0R09_RS22500	SM00091	PAS domain
C0R09_RS22500	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS22545	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C0R09_RS22575	SM00981	C0R09_RS22575
C0R09_RS22580	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
C0R09_RS22580	SM01232	C0R09_RS22580
C0R09_RS22600	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS22605	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS22640	SM00155	Phospholipase D. Active site motifs.
C0R09_RS22645	SM01060	C0R09_RS22645
C0R09_RS22660	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS22665	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS22685	SM00729	Elongator protein 3, MiaB family, Radical SAM
C0R09_RS22690	SM00852	Probable molybdopterin binding domain
C0R09_RS22705	SM00986	Uracil DNA glycosylase superfamily
C0R09_RS22705	SM00987	UreE urease accessory protein, C-terminal domain 
C0R09_RS22730	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS22805	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS22820	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C0R09_RS22820	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C0R09_RS22840	SM00834	Putative regulatory protein
C0R09_RS22845	SM00448	cheY-homologous receiver domain
C0R09_RS22845	SM00862	Transcriptional regulatory protein, C terminal
C0R09_RS22850	SM00387	Histidine kinase-like ATPases
C0R09_RS22850	SM00388	His Kinase A (phosphoacceptor) domain
C0R09_RS22855	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS22865	SM00287	Bacterial SH3 domain homologues
C0R09_RS22870	SM00341	Helicase and RNase D C-terminal
C0R09_RS22870	SM00487	DEAD-like helicases superfamily
C0R09_RS22870	SM00490	helicase superfamily c-terminal domain
C0R09_RS22870	SM00956	C0R09_RS22870
C0R09_RS22875	SM00331	Sigma factor PP2C-like phosphatases
C0R09_RS22875	SM00448	cheY-homologous receiver domain
C0R09_RS22885	SM00138	Methyltransferase, chemotaxis proteins 
C0R09_RS22890	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C0R09_RS22890	SM00387	Histidine kinase-like ATPases
C0R09_RS22890	SM00388	His Kinase A (phosphoacceptor) domain
C0R09_RS22890	SM00448	cheY-homologous receiver domain
C0R09_RS22895	SM00028	Tetratricopeptide repeats
C0R09_RS22900	SM00363	S4 RNA-binding domain
C0R09_RS22915	SM00487	DEAD-like helicases superfamily
C0R09_RS22915	SM00490	helicase superfamily c-terminal domain
C0R09_RS22970	SM00448	cheY-homologous receiver domain
C0R09_RS22970	SM00862	Transcriptional regulatory protein, C terminal
C0R09_RS22975	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C0R09_RS22975	SM00387	Histidine kinase-like ATPases
C0R09_RS22975	SM00388	His Kinase A (phosphoacceptor) domain
C0R09_RS22995	SM00448	cheY-homologous receiver domain
C0R09_RS23000	SM00387	Histidine kinase-like ATPases
C0R09_RS23015	SM00062	Bacterial periplasmic substrate-binding proteins
C0R09_RS23015	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
C0R09_RS23020	SM00382	ATPases associated with a variety of cellular activities
C0R09_RS23040	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C0R09_RS23045	SM00422	helix_turn_helix, mercury resistance
C0R09_RS23085	SM00327	von Willebrand factor (vWF) type A domain
C0R09_RS23100	SM00327	von Willebrand factor (vWF) type A domain
C0R09_RS23115	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C0R09_RS23115	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C0R09_RS23140	SM00530	Helix-turn-helix XRE-family like proteins 
C0R09_RS23145	SM00100	Cyclic nucleotide-monophosphate binding domain
C0R09_RS23145	SM00419	helix_turn_helix, cAMP Regulatory protein
C0R09_RS23250	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C0R09_RS23260	SM00849	Metallo-beta-lactamase superfamily
C0R09_RS23275	SM00091	PAS domain
C0R09_RS23275	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C0R09_RS23275	SM00387	Histidine kinase-like ATPases
C0R09_RS23275	SM00388	His Kinase A (phosphoacceptor) domain
C0R09_RS23280	SM00448	cheY-homologous receiver domain
C0R09_RS23280	SM00862	Transcriptional regulatory protein, C terminal
C0R09_RS23285	SM00257	Lysin motif
C0R09_RS23285	SM01208	C0R09_RS23285
C0R09_RS23300	SM00788	Adenylosuccinate synthetase
C0R09_RS23315	SM00267	diguanylate cyclase
C0R09_RS23380	SM00470	ParB-like nuclease domain
C0R09_RS23390	SM00470	ParB-like nuclease domain
C0R09_RS23400	SM01228	C0R09_RS23400
C0R09_RS23410	SM00393	Putative single-stranded nucleic acids-binding domain
C0R09_RS23410	SM01245	C0R09_RS23410
C0R09_RS23420	SM01234	C0R09_RS23420
