locus-tag class description C628_RS00005 PF00308 Bacterial dnaA protein C628_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix C628_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain C628_RS00010 PF02767 DNA polymerase III beta subunit, central domain C628_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain C628_RS00015 PF02463 RecF/RecN/SMC N terminal domain C628_RS00020 PF05258 Dna[CI] antecedent, DciA C628_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus C628_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C628_RS00025 PF01751 Toprim domain C628_RS00025 PF00204 DNA gyrase B C628_RS00065 PF03989 DNA gyrase C-terminal domain, beta-propeller C628_RS00065 PF00521 DNA gyrase/topoisomerase IV, subunit A C628_RS00085 PF03601 Conserved hypothetical protein 698 C628_RS00090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C628_RS00090 PF03466 LysR substrate binding domain C628_RS00105 PF13462 Thioredoxin C628_RS00105 PF06965 Na+/H+ antiporter 1 C628_RS00115 PF01435 Peptidase family M48 C628_RS00120 PF00248 Aldo/keto reductase family C628_RS00150 PF14765 Polyketide synthase dehydratase C628_RS00150 PF16197 Ketoacyl-synthetase C-terminal extension C628_RS00150 PF00109 Beta-ketoacyl synthase, N-terminal domain C628_RS00150 PF00698 Acyl transferase domain C628_RS00150 PF08659 KR domain C628_RS00150 PF00550 Phosphopantetheine attachment site C628_RS00150 PF08240 Alcohol dehydrogenase GroES-like domain C628_RS00150 PF02801 Beta-ketoacyl synthase, C-terminal domain C628_RS00165 PF13439 Glycosyltransferase Family 4 C628_RS00165 PF00534 Glycosyl transferases group 1 C628_RS00190 PF00534 Glycosyl transferases group 1 C628_RS00190 PF13439 Glycosyltransferase Family 4 C628_RS00195 PF13439 Glycosyltransferase Family 4 C628_RS00195 PF00534 Glycosyl transferases group 1 C628_RS00200 PF02397 Bacterial sugar transferase C628_RS00205 PF00534 Glycosyl transferases group 1 C628_RS00205 PF13439 Glycosyltransferase Family 4 C628_RS00225 PF02566 OsmC-like protein C628_RS00230 PF00270 DEAD/DEAH box helicase C628_RS00230 PF13749 Putative ATP-dependent DNA helicase recG C-terminal C628_RS00230 PF17191 RecG wedge domain C628_RS00240 PF01297 Zinc-uptake complex component A periplasmic C628_RS00245 PF00950 ABC 3 transport family C628_RS00250 PF00005 ABC transporter C628_RS00260 PF02653 Branched-chain amino acid transport system / permease component C628_RS00265 PF00005 ABC transporter C628_RS00275 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C628_RS00285 PF12833 Helix-turn-helix domain C628_RS00290 PF01497 Periplasmic binding protein C628_RS00295 PF01032 FecCD transport family C628_RS00300 PF01032 FecCD transport family C628_RS00305 PF00005 ABC transporter C628_RS00320 PF06781 Cell division protein CrgA C628_RS00325 PF03793 PASTA domain C628_RS00325 PF00069 Protein kinase domain C628_RS00330 PF00069 Protein kinase domain C628_RS00335 PF00905 Penicillin binding protein transpeptidase domain C628_RS00340 PF01098 Cell cycle protein C628_RS00350 PF16697 Inner membrane component of T3SS, cytoplasmic domain C628_RS00355 PF00498 FHA domain C628_RS00355 PF12401 Protein of unknown function (DUF2662) C628_RS00365 PF13289 SIR2-like domain C628_RS00380 PF12161 HsdM N-terminal domain C628_RS00380 PF02384 N-6 DNA Methylase C628_RS00400 PF00171 Aldehyde dehydrogenase family C628_RS00410 PF00753 Metallo-beta-lactamase superfamily C628_RS00415 PF01925 Sulfite exporter TauE/SafE C628_RS00420 PF00581 Rhodanese-like domain C628_RS00425 PF11127 Protein of unknown function (DUF2892) C628_RS00425 PF00581 Rhodanese-like domain C628_RS00430 PF02583 Metal-sensitive transcriptional repressor C628_RS00435 PF13936 Helix-turn-helix domain C628_RS00435 PF00665 Integrase core domain C628_RS00465 PF01544 CorA-like Mg2+ transporter protein C628_RS00485 PF02562 PhoH-like protein C628_RS00485 PF13638 PIN domain C628_RS00495 PF03600 Citrate transporter C628_RS00500 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain C628_RS00500 PF17203 Single cache domain 3 C628_RS00500 PF00989 PAS fold C628_RS00500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C628_RS00505 PF12431 Transcriptional regulator C628_RS00505 PF00072 Response regulator receiver domain C628_RS00510 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C628_RS00520 PF04055 Radical SAM superfamily C628_RS00520 PF06968 Biotin and Thiamin Synthesis associated domain C628_RS00555 PF07690 Major Facilitator Superfamily C628_RS00560 PF07969 Amidohydrolase family C628_RS00575 PF02146 Sir2 family C628_RS00580 PF00561 alpha/beta hydrolase fold C628_RS00600 PF00547 Urease, gamma subunit C628_RS00605 PF00699 Urease beta subunit C628_RS00610 PF00449 Urease alpha-subunit, N-terminal domain C628_RS00610 PF01979 Amidohydrolase family C628_RS00615 PF05194 UreE urease accessory protein, C-terminal domain C628_RS00615 PF02814 UreE urease accessory protein, N-terminal domain C628_RS00620 PF01730 UreF C628_RS00625 PF02492 CobW/HypB/UreG, nucleotide-binding domain C628_RS00630 PF01774 UreD urease accessory protein C628_RS00635 PF07690 Major Facilitator Superfamily C628_RS00645 PF00183 Hsp90 protein C628_RS00650 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus C628_RS00650 PF01048 Phosphorylase superfamily C628_RS00670 PF00171 Aldehyde dehydrogenase family C628_RS00675 PF00248 Aldo/keto reductase family C628_RS00680 PF03806 AbgT putative transporter family C628_RS00690 PF02656 Domain of unknown function (DUF202) C628_RS00705 PF08220 DeoR-like helix-turn-helix domain C628_RS00705 PF00455 DeoR C terminal sensor domain C628_RS00710 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C628_RS00720 PF01232 Mannitol dehydrogenase Rossmann domain C628_RS00720 PF08125 Mannitol dehydrogenase C-terminal domain C628_RS00725 PF07690 Major Facilitator Superfamily C628_RS00735 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C628_RS00735 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C628_RS00740 PF02569 Pantoate-beta-alanine ligase C628_RS00745 PF02548 Ketopantoate hydroxymethyltransferase C628_RS00770 PF12728 Helix-turn-helix domain C628_RS00775 PF02245 Methylpurine-DNA glycosylase (MPG) C628_RS00785 PF07859 alpha/beta hydrolase fold C628_RS00795 PF00132 Bacterial transferase hexapeptide (six repeats) C628_RS00830 PF03458 UPF0126 domain C628_RS00840 PF02261 Aspartate decarboxylase C628_RS00850 PF05145 Transition state regulatory protein AbrB C628_RS00860 PF01925 Sulfite exporter TauE/SafE C628_RS00870 PF08482 ATP-dependent helicase C-terminal C628_RS00870 PF00271 Helicase conserved C-terminal domain C628_RS00870 PF04408 Helicase associated domain (HA2) C628_RS00870 PF00270 DEAD/DEAH box helicase C628_RS00875 PF14602 Hexapeptide repeat of succinyl-transferase C628_RS00875 PF12464 Maltose acetyltransferase C628_RS00880 PF13532 2OG-Fe(II) oxygenase superfamily C628_RS00885 PF03352 Methyladenine glycosylase C628_RS00890 PF01810 LysE type translocator C628_RS00920 PF01042 Endoribonuclease L-PSP C628_RS00935 PF05649 Peptidase family M13 C628_RS00935 PF01431 Peptidase family M13 C628_RS00950 PF00392 Bacterial regulatory proteins, gntR family C628_RS00950 PF07702 UTRA domain C628_RS00955 PF00294 pfkB family carbohydrate kinase C628_RS00965 PF00171 Aldehyde dehydrogenase family C628_RS00970 PF04962 KduI/IolB family C628_RS00975 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C628_RS00975 PF00205 Thiamine pyrophosphate enzyme, central domain C628_RS00975 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C628_RS00985 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C628_RS00985 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C628_RS00990 PF01261 Xylose isomerase-like TIM barrel C628_RS00995 PF07690 Major Facilitator Superfamily C628_RS01000 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C628_RS01000 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C628_RS01015 PF00356 Bacterial regulatory proteins, lacI family C628_RS01020 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C628_RS01020 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C628_RS01030 PF00313 'Cold-shock' DNA-binding domain C628_RS01050 PF00005 ABC transporter C628_RS01050 PF08402 TOBE domain C628_RS01060 PF00356 Bacterial regulatory proteins, lacI family C628_RS01075 PF00356 Bacterial regulatory proteins, lacI family C628_RS01085 PF00083 Sugar (and other) transporter C628_RS01095 PF00310 Glutamine amidotransferases class-II C628_RS01095 PF01645 Conserved region in glutamate synthase C628_RS01095 PF04898 Glutamate synthase central domain C628_RS01095 PF01493 GXGXG motif C628_RS01100 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C628_RS01100 PF07992 Pyridine nucleotide-disulphide oxidoreductase C628_RS01110 PF00196 Bacterial regulatory proteins, luxR family C628_RS01110 PF00072 Response regulator receiver domain C628_RS01120 PF13333 Integrase core domain C628_RS01120 PF00665 Integrase core domain C628_RS01120 PF13276 HTH-like domain C628_RS01125 PF01527 Transposase C628_RS01130 PF00005 ABC transporter C628_RS01155 PF14896 EmbC C-terminal domain C628_RS01155 PF17689 Arabinosyltransferase concanavalin like domain C628_RS01155 PF04602 Mycobacterial cell wall arabinan synthesis protein C628_RS01160 PF12250 Arabinofuranosyltransferase N terminal C628_RS01160 PF12249 Arabinofuranosyltransferase A C terminal C628_RS01165 PF00106 short chain dehydrogenase C628_RS01170 PF01565 FAD binding domain C628_RS01170 PF04030 D-arabinono-1,4-lactone oxidase C628_RS01195 PF04138 GtrA-like protein C628_RS01220 PF00005 ABC transporter C628_RS01225 PF01061 ABC-2 type transporter C628_RS01230 PF00266 Aminotransferase class-V C628_RS01235 PF08240 Alcohol dehydrogenase GroES-like domain C628_RS01235 PF00107 Zinc-binding dehydrogenase C628_RS01250 PF00175 Oxidoreductase NAD-binding domain C628_RS01250 PF00111 2Fe-2S iron-sulfur cluster binding domain C628_RS01250 PF00970 Oxidoreductase FAD-binding domain C628_RS01255 PF01235 Sodium:alanine symporter family C628_RS01270 PF00899 ThiF family C628_RS01270 PF00581 Rhodanese-like domain C628_RS01280 PF00994 Probable molybdopterin binding domain C628_RS01280 PF01967 MoaC family C628_RS01285 PF01967 MoaC family C628_RS01290 PF03454 MoeA C-terminal region (domain IV) C628_RS01290 PF03453 MoeA N-terminal region (domain I and II) C628_RS01290 PF00994 Probable molybdopterin binding domain C628_RS01295 PF00528 Binding-protein-dependent transport system inner membrane component C628_RS01310 PF08402 TOBE domain C628_RS01310 PF00005 ABC transporter C628_RS01315 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV C628_RS01320 PF00155 Aminotransferase class I and II C628_RS01335 PF03448 MgtE intracellular N domain C628_RS01335 PF00571 CBS domain C628_RS01335 PF01769 Divalent cation transporter C628_RS01340 PF00939 Sodium:sulfate symporter transmembrane region C628_RS01350 PF02153 Prephenate dehydrogenase C628_RS01360 PF14437 MafB19-like deaminase C628_RS01365 PF05532 CsbD-like C628_RS01380 PF03176 MMPL family C628_RS01385 PF01702 Queuine tRNA-ribosyltransferase C628_RS01405 PF00749 tRNA synthetases class I (E and Q), catalytic domain C628_RS01430 PF12897 Alanine-glyoxylate amino-transferase C628_RS01440 PF12169 DNA polymerase III subunits gamma and tau domain III C628_RS01445 PF02575 YbaB/EbfC DNA-binding family C628_RS01450 PF13662 Toprim domain C628_RS01450 PF02132 RecR protein C628_RS01455 PF07685 CobB/CobQ-like glutamine amidotransferase domain C628_RS01460 PF02875 Mur ligase family, glutamate ligase domain C628_RS01460 PF01225 Mur ligase family, catalytic domain C628_RS01460 PF08245 Mur ligase middle domain C628_RS01475 PF16555 Gram-positive pilin subunit D1, N-terminal domain C628_RS01475 PF00746 LPXTG cell wall anchor motif C628_RS01495 PF00682 HMGL-like C628_RS01495 PF08502 LeuA allosteric (dimerisation) domain C628_RS01505 PF01842 ACT domain C628_RS01505 PF13840 ACT domain C628_RS01505 PF00696 Amino acid kinase family C628_RS01510 PF02774 Semialdehyde dehydrogenase, dimerisation domain C628_RS01510 PF01118 Semialdehyde dehydrogenase, NAD binding domain C628_RS01520 PF08281 Sigma-70, region 4 C628_RS01520 PF04542 Sigma-70 region 2 C628_RS01525 PF00199 Catalase C628_RS01525 PF06628 Catalase-related immune-responsive C628_RS01540 PF03591 AzlC protein C628_RS01560 PF01758 Sodium Bile acid symporter family C628_RS01565 PF01451 Low molecular weight phosphotyrosine protein phosphatase C628_RS01585 PF00361 Proton-conducting membrane transporter C628_RS01590 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C628_RS01595 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C628_RS01595 PF13244 Domain of unknown function (DUF4040) C628_RS01595 PF00361 Proton-conducting membrane transporter C628_RS01610 PF00486 Transcriptional regulatory protein, C terminal C628_RS01610 PF00072 Response regulator receiver domain C628_RS01620 PF01527 Transposase C628_RS01625 PF13276 HTH-like domain C628_RS01625 PF00665 Integrase core domain C628_RS01625 PF13333 Integrase core domain C628_RS01660 PF00912 Transglycosylase C628_RS01660 PF00905 Penicillin binding protein transpeptidase domain C628_RS01665 PF02467 Transcription factor WhiB C628_RS01675 PF01042 Endoribonuclease L-PSP C628_RS01680 PF07690 Major Facilitator Superfamily C628_RS01680 PF00083 Sugar (and other) transporter C628_RS01685 PF13193 AMP-binding enzyme C-terminal domain C628_RS01685 PF00501 AMP-binding enzyme C628_RS01690 PF01047 MarR family C628_RS01705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C628_RS01705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C628_RS01705 PF02770 Acyl-CoA dehydrogenase, middle domain C628_RS01710 PF01575 MaoC like domain C628_RS01715 PF00753 Metallo-beta-lactamase superfamily C628_RS01715 PF16123 Hydroxyacylglutathione hydrolase C-terminus C628_RS01720 PF00027 Cyclic nucleotide-binding domain C628_RS01720 PF13545 Crp-like helix-turn-helix domain C628_RS01730 PF00633 Helix-hairpin-helix motif C628_RS01730 PF10576 Iron-sulfur binding domain of endonuclease III C628_RS01730 PF00730 HhH-GPD superfamily base excision DNA repair protein C628_RS01735 PF00578 AhpC/TSA family C628_RS01740 PF00293 NUDIX domain C628_RS01745 PF02674 Colicin V production protein C628_RS01775 PF00437 Type II/IV secretion system protein C628_RS01805 PF00270 DEAD/DEAH box helicase C628_RS01805 PF09369 Domain of unknown function (DUF1998) C628_RS01805 PF00271 Helicase conserved C-terminal domain C628_RS01810 PF00313 'Cold-shock' DNA-binding domain C628_RS01815 PF01131 DNA topoisomerase C628_RS01815 PF01751 Toprim domain C628_RS01815 PF13368 Topoisomerase C-terminal repeat C628_RS01825 PF00211 Adenylate and Guanylate cyclase catalytic domain C628_RS01825 PF00672 HAMP domain C628_RS01830 PF09115 DNA polymerase III, delta subunit, C terminal C628_RS01855 PF01479 S4 domain C628_RS01855 PF00849 RNA pseudouridylate synthase C628_RS01860 PF00933 Glycosyl hydrolase family 3 N terminal domain C628_RS01865 PF08240 Alcohol dehydrogenase GroES-like domain C628_RS01865 PF00107 Zinc-binding dehydrogenase C628_RS01875 PF00106 short chain dehydrogenase C628_RS01880 PF07690 Major Facilitator Superfamily C628_RS01885 PF16363 GDP-mannose 4,6 dehydratase C628_RS01890 PF00665 Integrase core domain C628_RS01890 PF13936 Helix-turn-helix domain C628_RS01900 PF00535 Glycosyl transferase family 2 C628_RS01915 PF00149 Calcineurin-like phosphoesterase C628_RS01915 PF02872 5'-nucleotidase, C-terminal domain C628_RS01920 PF08240 Alcohol dehydrogenase GroES-like domain C628_RS01920 PF00107 Zinc-binding dehydrogenase C628_RS01925 PF02633 Creatinine amidohydrolase C628_RS01930 PF07690 Major Facilitator Superfamily C628_RS01935 PF00483 Nucleotidyl transferase C628_RS01940 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase C628_RS01945 PF16363 GDP-mannose 4,6 dehydratase C628_RS01950 PF00881 Nitroreductase family C628_RS01955 PF01497 Periplasmic binding protein C628_RS01970 PF01433 Peptidase family M1 domain C628_RS01970 PF11838 ERAP1-like C-terminal domain C628_RS01975 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain C628_RS01975 PF00326 Prolyl oligopeptidase family C628_RS02015 PF08310 LGFP repeat C628_RS02015 PF00756 Putative esterase C628_RS02030 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase C628_RS02035 PF16363 GDP-mannose 4,6 dehydratase C628_RS02045 PF00012 Hsp70 protein C628_RS02095 PF01433 Peptidase family M1 domain C628_RS02095 PF11838 ERAP1-like C-terminal domain C628_RS02100 PF00326 Prolyl oligopeptidase family C628_RS02100 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain C628_RS02110 PF08310 LGFP repeat C628_RS02110 PF00756 Putative esterase C628_RS02115 PF02350 UDP-N-acetylglucosamine 2-epimerase C628_RS02125 PF13439 Glycosyltransferase Family 4 C628_RS02125 PF00534 Glycosyl transferases group 1 C628_RS02140 PF00872 Transposase, Mutator family C628_RS02145 PF13333 Integrase core domain C628_RS02145 PF00665 Integrase core domain C628_RS02145 PF13276 HTH-like domain C628_RS02175 PF00005 ABC transporter C628_RS02200 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C628_RS02200 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C628_RS02200 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C628_RS02205 PF13276 HTH-like domain C628_RS02205 PF00665 Integrase core domain C628_RS02215 PF01527 Transposase C628_RS02265 PF01548 Transposase C628_RS02265 PF02371 Transposase IS116/IS110/IS902 family C628_RS02275 PF13333 Integrase core domain C628_RS02275 PF13276 HTH-like domain C628_RS02275 PF00665 Integrase core domain C628_RS02280 PF13333 Integrase core domain C628_RS02280 PF13276 HTH-like domain C628_RS02280 PF00665 Integrase core domain C628_RS02285 PF01527 Transposase C628_RS02300 PF07992 Pyridine nucleotide-disulphide oxidoreductase C628_RS02300 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C628_RS02305 PF00483 Nucleotidyl transferase C628_RS02310 PF04073 Aminoacyl-tRNA editing domain C628_RS02315 PF06114 IrrE N-terminal-like domain C628_RS02315 PF01381 Helix-turn-helix C628_RS02315 PF09856 Predicted transcriptional regulator (DUF2083) C628_RS02325 PF02910 Fumarate reductase flavoprotein C-term C628_RS02325 PF00890 FAD binding domain C628_RS02330 PF13085 2Fe-2S iron-sulfur cluster binding domain C628_RS02330 PF13183 4Fe-4S dicluster domain C628_RS02350 PF04286 Protein of unknown function (DUF445) C628_RS02370 PF07690 Major Facilitator Superfamily C628_RS02375 PF07690 Major Facilitator Superfamily C628_RS02380 PF00551 Formyl transferase C628_RS02380 PF01842 ACT domain C628_RS02385 PF01791 DeoC/LacD family aldolase C628_RS02395 PF02583 Metal-sensitive transcriptional repressor C628_RS02400 PF00403 Heavy-metal-associated domain C628_RS02415 PF01497 Periplasmic binding protein C628_RS02420 PF01032 FecCD transport family C628_RS02425 PF00005 ABC transporter C628_RS02455 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain C628_RS02455 PF01565 FAD binding domain C628_RS02465 PF13193 AMP-binding enzyme C-terminal domain C628_RS02465 PF00501 AMP-binding enzyme C628_RS02470 PF13439 Glycosyltransferase Family 4 C628_RS02470 PF00534 Glycosyl transferases group 1 C628_RS02475 PF00300 Histidine phosphatase superfamily (branch 1) C628_RS02480 PF00512 His Kinase A (phospho-acceptor) domain C628_RS02480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C628_RS02485 PF00486 Transcriptional regulatory protein, C terminal C628_RS02485 PF00072 Response regulator receiver domain C628_RS02495 PF12704 MacB-like periplasmic core domain C628_RS02495 PF02687 FtsX-like permease family C628_RS02505 PF02541 Ppx/GppA phosphatase family C628_RS02515 PF03807 NADP oxidoreductase coenzyme F420-dependent C628_RS02515 PF14748 Pyrroline-5-carboxylate reductase dimerisation C628_RS02520 PF12728 Helix-turn-helix domain C628_RS02530 PF05768 Glutaredoxin-like domain (DUF836) C628_RS02535 PF01488 Shikimate / quinate 5-dehydrogenase C628_RS02535 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain C628_RS02535 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain C628_RS02540 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain C628_RS02540 PF03900 Porphobilinogen deaminase, C-terminal domain C628_RS02550 PF03466 LysR substrate binding domain C628_RS02550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C628_RS02555 PF07690 Major Facilitator Superfamily C628_RS02555 PF00083 Sugar (and other) transporter C628_RS02560 PF01261 Xylose isomerase-like TIM barrel C628_RS02560 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C628_RS02565 PF01220 Dehydroquinase class II C628_RS02570 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C628_RS02570 PF08501 Shikimate dehydrogenase substrate binding domain C628_RS02575 PF00542 Ribosomal protein L7/L12 C-terminal domain C628_RS02575 PF16320 Ribosomal protein L7/L12 dimerisation domain C628_RS02590 PF08402 TOBE domain C628_RS02590 PF00005 ABC transporter C628_RS02595 PF00528 Binding-protein-dependent transport system inner membrane component C628_RS02605 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C628_RS02605 PF14824 Sirohaem biosynthesis protein central C628_RS02605 PF10414 Sirohaem synthase dimerisation region C628_RS02615 PF00490 Delta-aminolevulinic acid dehydratase C628_RS02635 PF01208 Uroporphyrinogen decarboxylase (URO-D) C628_RS02645 PF00202 Aminotransferase class-III C628_RS02650 PF00300 Histidine phosphatase superfamily (branch 1) C628_RS02660 PF02683 Cytochrome C biogenesis protein transmembrane region C628_RS02665 PF05140 ResB-like family C628_RS02670 PF01578 Cytochrome C assembly protein C628_RS02700 PF01040 UbiA prenyltransferase family C628_RS02710 PF13193 AMP-binding enzyme C-terminal domain C628_RS02710 PF00501 AMP-binding enzyme C628_RS02720 PF00171 Aldehyde dehydrogenase family C628_RS02725 PF00701 Dihydrodipicolinate synthetase family C628_RS02730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C628_RS02730 PF03466 LysR substrate binding domain C628_RS02760 PF01384 Phosphate transporter family C628_RS02795 PF00378 Enoyl-CoA hydratase/isomerase C628_RS02800 PF01329 Pterin 4 alpha carbinolamine dehydratase C628_RS02805 PF03575 Peptidase family S51 C628_RS02810 PF18374 Enolase N-terminal domain-like C628_RS02810 PF13378 Enolase C-terminal domain-like C628_RS02815 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C628_RS02825 PF13439 Glycosyltransferase Family 4 C628_RS02825 PF00534 Glycosyl transferases group 1 C628_RS02830 PF00324 Amino acid permease C628_RS02835 PF01209 ubiE/COQ5 methyltransferase family C628_RS02840 PF01494 FAD binding domain C628_RS02845 PF00348 Polyprenyl synthetase C628_RS02875 PF00584 SecE/Sec61-gamma subunits of protein translocation complex C628_RS02880 PF02357 Transcription termination factor nusG C628_RS02885 PF03946 Ribosomal protein L11, N-terminal domain C628_RS02885 PF00298 Ribosomal protein L11, RNA binding domain C628_RS02890 PF00687 Ribosomal protein L1p/L10e family C628_RS02900 PF00202 Aminotransferase class-III C628_RS02905 PF00171 Aldehyde dehydrogenase family C628_RS02915 PF00403 Heavy-metal-associated domain C628_RS02930 PF00466 Ribosomal protein L10 C628_RS02935 PF00542 Ribosomal protein L7/L12 C-terminal domain C628_RS02935 PF16320 Ribosomal protein L7/L12 dimerisation domain C628_RS02950 PF04563 RNA polymerase beta subunit C628_RS02950 PF04561 RNA polymerase Rpb2, domain 2 C628_RS02950 PF04565 RNA polymerase Rpb2, domain 3 C628_RS02950 PF10385 RNA polymerase beta subunit external 1 domain C628_RS02950 PF00562 RNA polymerase Rpb2, domain 6 C628_RS02950 PF04560 RNA polymerase Rpb2, domain 7 C628_RS02955 PF04998 RNA polymerase Rpb1, domain 5 C628_RS02955 PF04983 RNA polymerase Rpb1, domain 3 C628_RS02955 PF00623 RNA polymerase Rpb1, domain 2 C628_RS02955 PF04997 RNA polymerase Rpb1, domain 1 C628_RS02975 PF00164 Ribosomal protein S12/S23 C628_RS02980 PF00177 Ribosomal protein S7p/S5e C628_RS02985 PF00009 Elongation factor Tu GTP binding domain C628_RS02985 PF00679 Elongation factor G C-terminus C628_RS02985 PF03764 Elongation factor G, domain IV C628_RS02985 PF03144 Elongation factor Tu domain 2 C628_RS02985 PF14492 Elongation Factor G, domain II C628_RS02990 PF00009 Elongation factor Tu GTP binding domain C628_RS02990 PF03144 Elongation factor Tu domain 2 C628_RS02990 PF03143 Elongation factor Tu C-terminal domain C628_RS03015 PF00005 ABC transporter C628_RS03025 PF01032 FecCD transport family C628_RS03030 PF01965 DJ-1/PfpI family C628_RS03035 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain C628_RS03035 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain C628_RS03040 PF00080 Copper/zinc superoxide dismutase (SODC) C628_RS03045 PF00106 short chain dehydrogenase C628_RS03055 PF03176 MMPL family C628_RS03060 PF00665 Integrase core domain C628_RS03065 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain C628_RS03065 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain C628_RS03070 PF00338 Ribosomal protein S10p/S20e C628_RS03075 PF00297 Ribosomal protein L3 C628_RS03080 PF00573 Ribosomal protein L4/L1 family C628_RS03085 PF00276 Ribosomal protein L23 C628_RS03090 PF03947 Ribosomal Proteins L2, C-terminal domain C628_RS03090 PF00181 Ribosomal Proteins L2, RNA binding domain C628_RS03095 PF00203 Ribosomal protein S19 C628_RS03100 PF00237 Ribosomal protein L22p/L17e C628_RS03105 PF00189 Ribosomal protein S3, C-terminal domain C628_RS03105 PF07650 KH domain C628_RS03110 PF00252 Ribosomal protein L16p/L10e C628_RS03115 PF00831 Ribosomal L29 protein C628_RS03120 PF00366 Ribosomal protein S17 C628_RS03135 PF00238 Ribosomal protein L14p/L23e C628_RS03140 PF00467 KOW motif C628_RS03140 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 C628_RS03145 PF00281 Ribosomal protein L5 C628_RS03145 PF00673 ribosomal L5P family C-terminus C628_RS03155 PF00248 Aldo/keto reductase family C628_RS03165 PF02634 FdhD/NarQ family C628_RS03175 PF00384 Molybdopterin oxidoreductase C628_RS03175 PF01568 Molydopterin dinucleotide binding domain C628_RS03190 PF00005 ABC transporter C628_RS03215 PF00410 Ribosomal protein S8 C628_RS03220 PF00347 Ribosomal protein L6 C628_RS03225 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast C628_RS03230 PF03719 Ribosomal protein S5, C-terminal domain C628_RS03230 PF00333 Ribosomal protein S5, N-terminal domain C628_RS03235 PF00327 Ribosomal protein L30p/L7e C628_RS03240 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A C628_RS03245 PF00171 Aldehyde dehydrogenase family C628_RS03255 PF00171 Aldehyde dehydrogenase family C628_RS03265 PF14759 Reductase C-terminal C628_RS03265 PF07992 Pyridine nucleotide-disulphide oxidoreductase C628_RS03270 PF00111 2Fe-2S iron-sulfur cluster binding domain C628_RS03275 PF00106 short chain dehydrogenase C628_RS03280 PF00391 PEP-utilising enzyme, mobile domain C628_RS03280 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C628_RS03285 PF00391 PEP-utilising enzyme, mobile domain C628_RS03285 PF02896 PEP-utilising enzyme, TIM barrel domain C628_RS03285 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C628_RS03290 PF00067 Cytochrome P450 C628_RS03295 PF01614 Bacterial transcriptional regulator C628_RS03295 PF09339 IclR helix-turn-helix domain C628_RS03300 PF00344 SecY translocase C628_RS03310 PF00557 Metallopeptidase family M24 C628_RS03320 PF01176 Translation initiation factor 1A / IF-1 C628_RS03325 PF00416 Ribosomal protein S13/S18 C628_RS03330 PF00411 Ribosomal protein S11 C628_RS03335 PF01479 S4 domain C628_RS03335 PF00163 Ribosomal protein S4/S9 N-terminal domain C628_RS03340 PF01000 RNA polymerase Rpb3/RpoA insert domain C628_RS03340 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain C628_RS03340 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain C628_RS03345 PF01196 Ribosomal protein L17 C628_RS03350 PF01416 tRNA pseudouridine synthase C628_RS03365 PF05108 Type VII secretion system ESX-1, transport TM domain B C628_RS03385 PF00082 Subtilase family C628_RS03395 PF01580 FtsK/SpoIIIE family C628_RS03405 PF06013 Proteins of 100 residues with WXG C628_RS03410 PF06013 Proteins of 100 residues with WXG C628_RS03415 PF00572 Ribosomal protein L13 C628_RS03420 PF00380 Ribosomal protein S9/S16 C628_RS03425 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C628_RS03425 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C628_RS03425 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C628_RS03425 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C628_RS03450 PF01168 Alanine racemase, N-terminal domain C628_RS03450 PF00842 Alanine racemase, C-terminal domain C628_RS03455 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE C628_RS03460 PF06826 Predicted Permease Membrane Region C628_RS03460 PF02080 TrkA-C domain C628_RS03465 PF00561 alpha/beta hydrolase fold C628_RS03470 PF00814 Glycoprotease family C628_RS03475 PF00583 Acetyltransferase (GNAT) family C628_RS03480 PF00814 Glycoprotease family C628_RS03485 PF01256 Carbohydrate kinase C628_RS03485 PF03853 YjeF-related protein N-terminus C628_RS03495 PF00166 Chaperonin 10 Kd subunit C628_RS03500 PF00118 TCP-1/cpn60 chaperonin family C628_RS03505 PF02467 Transcription factor WhiB C628_RS03510 PF08281 Sigma-70, region 4 C628_RS03510 PF04542 Sigma-70 region 2 C628_RS03520 PF17252 Family of unknown function (DUF5319) C628_RS03525 PF00478 IMP dehydrogenase / GMP reductase domain C628_RS03525 PF00571 CBS domain C628_RS03530 PF00478 IMP dehydrogenase / GMP reductase domain C628_RS03535 PF00892 EamA-like transporter family C628_RS03540 PF03466 LysR substrate binding domain C628_RS03540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C628_RS03545 PF00117 Glutamine amidotransferase class-I C628_RS03545 PF02540 NAD synthase C628_RS03545 PF00958 GMP synthase C terminal domain C628_RS03565 PF00072 Response regulator receiver domain C628_RS03565 PF00196 Bacterial regulatory proteins, luxR family C628_RS03590 PF00817 impB/mucB/samB family C628_RS03590 PF11799 impB/mucB/samB family C-terminal domain C628_RS03605 PF01040 UbiA prenyltransferase family C628_RS03620 PF01593 Flavin containing amine oxidoreductase C628_RS03630 PF03176 MMPL family C628_RS03640 PF01527 Transposase C628_RS03645 PF13276 HTH-like domain C628_RS03645 PF00665 Integrase core domain C628_RS03645 PF13333 Integrase core domain C628_RS03660 PF13460 NAD(P)H-binding C628_RS03660 PF11066 Protein of unknown function (DUF2867) C628_RS03665 PF00875 DNA photolyase C628_RS03665 PF03441 FAD binding domain of DNA photolyase C628_RS03670 PF00535 Glycosyl transferase family 2 C628_RS03675 PF13333 Integrase core domain C628_RS03675 PF00665 Integrase core domain C628_RS03675 PF13276 HTH-like domain C628_RS03680 PF01527 Transposase C628_RS03695 PF02687 FtsX-like permease family C628_RS03695 PF12704 MacB-like periplasmic core domain C628_RS03695 PF00005 ABC transporter C628_RS03700 PF00528 Binding-protein-dependent transport system inner membrane component C628_RS03705 PF09383 NIL domain C628_RS03705 PF00005 ABC transporter C628_RS03710 PF03180 NLPA lipoprotein C628_RS03715 PF02811 PHP domain C628_RS03715 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C628_RS03715 PF07733 Bacterial DNA polymerase III alpha NTPase domain C628_RS03715 PF14579 Helix-hairpin-helix motif C628_RS03730 PF18357 Diphteria toxin repressor SH3 domain C628_RS03730 PF02742 Iron dependent repressor, metal binding and dimerisation domain C628_RS03730 PF01325 Iron dependent repressor, N-terminal DNA binding domain C628_RS03740 PF02146 Sir2 family C628_RS03755 PF00588 SpoU rRNA Methylase family C628_RS03760 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain C628_RS03760 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain C628_RS03785 PF00561 alpha/beta hydrolase fold C628_RS03790 PF01053 Cys/Met metabolism PLP-dependent enzyme C628_RS03795 PF02554 Carbon starvation protein CstA C628_RS03795 PF13722 5TM C-terminal transporter carbon starvation CstA C628_RS03805 PF03972 MmgE/PrpD family C628_RS03815 PF00285 Citrate synthase, C-terminal domain C628_RS03825 PF02615 Malate/L-lactate dehydrogenase C628_RS03840 PF03971 Monomeric isocitrate dehydrogenase C628_RS03845 PF04954 Siderophore-interacting protein C628_RS03845 PF08021 Siderophore-interacting FAD-binding domain C628_RS03850 PF00005 ABC transporter C628_RS03855 PF01032 FecCD transport family C628_RS03860 PF01032 FecCD transport family C628_RS03865 PF01497 Periplasmic binding protein C628_RS03870 PF07690 Major Facilitator Superfamily C628_RS03880 PF03458 UPF0126 domain C628_RS03895 PF00005 ABC transporter C628_RS03900 PF01032 FecCD transport family C628_RS03905 PF00579 tRNA synthetases class I (W and Y) C628_RS03910 PF03631 Virulence factor BrkB C628_RS03920 PF00768 D-alanyl-D-alanine carboxypeptidase C628_RS03930 PF00877 NlpC/P60 family C628_RS03950 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C628_RS03950 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C628_RS03950 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C628_RS03950 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C628_RS03955 PF04107 Glutamate-cysteine ligase family 2(GCS2) C628_RS03955 PF01546 Peptidase family M20/M25/M40 C628_RS03960 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C628_RS03960 PF07992 Pyridine nucleotide-disulphide oxidoreductase C628_RS03965 PF02785 Biotin carboxylase C-terminal domain C628_RS03965 PF00682 HMGL-like C628_RS03965 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C628_RS03965 PF00364 Biotin-requiring enzyme C628_RS03965 PF00289 Biotin carboxylase, N-terminal domain C628_RS03965 PF02436 Conserved carboxylase domain C628_RS03980 PF02492 CobW/HypB/UreG, nucleotide-binding domain C628_RS03980 PF07683 Cobalamin synthesis protein cobW C-terminal domain C628_RS03985 PF07992 Pyridine nucleotide-disulphide oxidoreductase C628_RS03990 PF03972 MmgE/PrpD family C628_RS04000 PF00285 Citrate synthase, C-terminal domain C628_RS04010 PF01381 Helix-turn-helix C628_RS04010 PF06114 IrrE N-terminal-like domain C628_RS04010 PF09856 Predicted transcriptional regulator (DUF2083) C628_RS04020 PF00289 Biotin carboxylase, N-terminal domain C628_RS04020 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C628_RS04020 PF00364 Biotin-requiring enzyme C628_RS04020 PF02785 Biotin carboxylase C-terminal domain C628_RS04025 PF00581 Rhodanese-like domain C628_RS04030 PF02951 Prokaryotic glutathione synthetase, N-terminal domain C628_RS04030 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain C628_RS04040 PF01757 Acyltransferase family C628_RS04045 PF02545 Maf-like protein C628_RS04055 PF01039 Carboxyl transferase domain C628_RS04060 PF01039 Carboxyl transferase domain C628_RS04075 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain C628_RS04075 PF02222 ATP-grasp domain C628_RS04080 PF02705 K+ potassium transporter C628_RS04090 PF00731 AIR carboxylase C628_RS04105 PF00296 Luciferase-like monooxygenase C628_RS04135 PF00528 Binding-protein-dependent transport system inner membrane component C628_RS04140 PF00528 Binding-protein-dependent transport system inner membrane component C628_RS04150 PF01547 Bacterial extracellular solute-binding protein C628_RS04155 PF00005 ABC transporter C628_RS04155 PF17912 MalK OB fold domain C628_RS04160 PF13333 Integrase core domain C628_RS04160 PF00665 Integrase core domain C628_RS04160 PF13276 HTH-like domain C628_RS04165 PF01527 Transposase C628_RS04190 PF13361 UvrD-like helicase C-terminal domain C628_RS04190 PF00580 UvrD/REP helicase N-terminal domain C628_RS04195 PF08494 DEAD/H associated C628_RS04195 PF00271 Helicase conserved C-terminal domain C628_RS04195 PF00270 DEAD/DEAH box helicase C628_RS04205 PF00271 Helicase conserved C-terminal domain C628_RS04205 PF00176 SNF2 family N-terminal domain C628_RS04210 PF03816 Cell envelope-related transcriptional attenuator domain C628_RS04210 PF13399 LytR cell envelope-related transcriptional attenuator C628_RS04220 PF00483 Nucleotidyl transferase C628_RS04225 PF02467 Transcription factor WhiB C628_RS04240 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C628_RS04240 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C628_RS04240 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C628_RS04240 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C628_RS04250 PF01238 Phosphomannose isomerase type I C628_RS04265 PF05221 S-adenosyl-L-homocysteine hydrolase C628_RS04265 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain C628_RS04270 PF02223 Thymidylate kinase C628_RS04275 PF00072 Response regulator receiver domain C628_RS04275 PF00486 Transcriptional regulatory protein, C terminal C628_RS04280 PF00672 HAMP domain C628_RS04280 PF00512 His Kinase A (phospho-acceptor) domain C628_RS04280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C628_RS04285 PF10647 Lipoprotein LpqB beta-propeller domain C628_RS04285 PF10646 Sporulation and spore germination C628_RS04295 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C628_RS04295 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus C628_RS04300 PF01043 SecA preprotein cross-linking domain C628_RS04300 PF07516 SecA Wing and Scaffold domain C628_RS04300 PF07517 SecA DEAD-like domain C628_RS04310 PF13419 Haloacid dehalogenase-like hydrolase C628_RS04320 PF03193 RsgA GTPase C628_RS04325 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C628_RS04340 PF04542 Sigma-70 region 2 C628_RS04340 PF08281 Sigma-70, region 4 C628_RS04345 PF02467 Transcription factor WhiB C628_RS04360 PF00271 Helicase conserved C-terminal domain C628_RS04360 PF00270 DEAD/DEAH box helicase C628_RS04385 PF13361 UvrD-like helicase C-terminal domain C628_RS04385 PF00580 UvrD/REP helicase N-terminal domain C628_RS04390 PF07885 Ion channel C628_RS04390 PF02254 TrkA-N domain C628_RS04395 PF00293 NUDIX domain C628_RS04395 PF09297 NADH pyrophosphatase zinc ribbon domain C628_RS04400 PF13361 UvrD-like helicase C-terminal domain C628_RS04400 PF00580 UvrD/REP helicase N-terminal domain C628_RS04400 PF00570 HRDC domain C628_RS04420 PF13180 PDZ domain C628_RS04420 PF05362 Lon protease (S16) C-terminal proteolytic domain C628_RS04435 PF03699 Uncharacterised protein family (UPF0182) C628_RS04445 PF03699 Uncharacterised protein family (UPF0182) C628_RS04450 PF00392 Bacterial regulatory proteins, gntR family C628_RS04455 PF01680 SOR/SNZ family C628_RS04460 PF01174 SNO glutamine amidotransferase family C628_RS04535 PF00459 Inositol monophosphatase family C628_RS04540 PF00459 Inositol monophosphatase family C628_RS04545 PF03462 PCRF domain C628_RS04545 PF00472 RF-1 domain C628_RS04550 PF00005 ABC transporter C628_RS04555 PF18075 FtsX extracellular domain C628_RS04555 PF02687 FtsX-like permease family C628_RS04560 PF01668 SmpB protein C628_RS04565 PF04343 Protein of unknown function, DUF488 C628_RS04580 PF00005 ABC transporter C628_RS04580 PF00664 ABC transporter transmembrane region C628_RS04580 PF08021 Siderophore-interacting FAD-binding domain C628_RS04580 PF04954 Siderophore-interacting protein C628_RS04585 PF01497 Periplasmic binding protein C628_RS04600 PF01032 FecCD transport family C628_RS04605 PF01032 FecCD transport family C628_RS04610 PF00005 ABC transporter C628_RS04635 PF00155 Aminotransferase class I and II C628_RS04645 PF00271 Helicase conserved C-terminal domain C628_RS04645 PF04851 Type III restriction enzyme, res subunit C628_RS04660 PF11574 Protein of unknown function (DUF3235) C628_RS04660 PF06737 Transglycosylase-like domain C628_RS04665 PF00313 'Cold-shock' DNA-binding domain C628_RS04685 PF00860 Permease family C628_RS04690 PF00588 SpoU rRNA Methylase family C628_RS04700 PF11268 Protein of unknown function (DUF3071) C628_RS04705 PF00266 Aminotransferase class-V C628_RS04710 PF00285 Citrate synthase, C-terminal domain C628_RS04715 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C628_RS04720 PF01039 Carboxyl transferase domain C628_RS04730 PF00474 Sodium:solute symporter family C628_RS04740 PF08924 Domain of unknown function (DUF1906) C628_RS04745 PF00698 Acyl transferase domain C628_RS04760 PF00561 alpha/beta hydrolase fold C628_RS04780 PF00462 Glutaredoxin C628_RS04785 PF00186 Dihydrofolate reductase C628_RS04790 PF00303 Thymidylate synthase C628_RS04795 PF00459 Inositol monophosphatase family C628_RS04800 PF00270 DEAD/DEAH box helicase C628_RS04800 PF08494 DEAD/H associated C628_RS04800 PF00271 Helicase conserved C-terminal domain C628_RS04805 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain C628_RS04805 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain C628_RS04810 PF03733 Inner membrane component domain C628_RS04815 PF09335 SNARE associated Golgi protein C628_RS04825 PF00342 Phosphoglucose isomerase C628_RS04845 PF01817 Chorismate mutase type II C628_RS04850 PF13361 UvrD-like helicase C-terminal domain C628_RS04850 PF00580 UvrD/REP helicase N-terminal domain C628_RS04860 PF12704 MacB-like periplasmic core domain C628_RS04860 PF02687 FtsX-like permease family C628_RS04860 PF00005 ABC transporter C628_RS04870 PF01551 Peptidase family M23 C628_RS04885 PF00551 Formyl transferase C628_RS04890 PF01808 AICARFT/IMPCHase bienzyme C628_RS04890 PF02142 MGS-like domain C628_RS04895 PF03328 HpcH/HpaI aldolase/citrate lyase family C628_RS04900 PF00440 Bacterial regulatory proteins, tetR family C628_RS04910 PF01084 Ribosomal protein S18 C628_RS04915 PF00253 Ribosomal protein S14p/S29e C628_RS04920 PF00471 Ribosomal protein L33 C628_RS04925 PF00830 Ribosomal L28 family C628_RS04930 PF00916 Sulfate permease family C628_RS04930 PF01740 STAS domain C628_RS04940 PF01197 Ribosomal protein L31 C628_RS04945 PF01783 Ribosomal L32p protein family C628_RS04950 PF00486 Transcriptional regulatory protein, C terminal C628_RS04950 PF00072 Response regulator receiver domain C628_RS04955 PF00672 HAMP domain C628_RS04955 PF00512 His Kinase A (phospho-acceptor) domain C628_RS04955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C628_RS04960 PF13180 PDZ domain C628_RS04970 PF01741 Large-conductance mechanosensitive channel, MscL C628_RS04980 PF01812 5-formyltetrahydrofolate cyclo-ligase family C628_RS04985 PF00483 Nucleotidyl transferase C628_RS04990 PF00994 Probable molybdopterin binding domain C628_RS04990 PF03454 MoeA C-terminal region (domain IV) C628_RS04990 PF03453 MoeA N-terminal region (domain I and II) C628_RS05005 PF07690 Major Facilitator Superfamily C628_RS05020 PF02903 Alpha amylase, N-terminal ig-like domain C628_RS05020 PF16657 Maltogenic Amylase, C-terminal domain C628_RS05020 PF00128 Alpha amylase, catalytic domain C628_RS05025 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase C628_RS05025 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase C628_RS05030 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C628_RS05035 PF02028 BCCT, betaine/carnitine/choline family transporter C628_RS05040 PF09334 tRNA synthetases class I (M) C628_RS05040 PF08264 Anticodon-binding domain of tRNA C628_RS05045 PF00271 Helicase conserved C-terminal domain C628_RS05045 PF00270 DEAD/DEAH box helicase C628_RS05045 PF16124 RecQ zinc-binding C628_RS05045 PF09382 RQC domain C628_RS05045 PF00570 HRDC domain C628_RS05050 PF04199 Putative cyclase C628_RS05060 PF07859 alpha/beta hydrolase fold C628_RS05070 PF13333 Integrase core domain C628_RS05070 PF00665 Integrase core domain C628_RS05070 PF13276 HTH-like domain C628_RS05080 PF09330 D-lactate dehydrogenase, membrane binding C628_RS05080 PF01565 FAD binding domain C628_RS05085 PF01555 DNA methylase C628_RS05095 PF13276 HTH-like domain C628_RS05095 PF13333 Integrase core domain C628_RS05095 PF00665 Integrase core domain C628_RS05100 PF01022 Bacterial regulatory protein, arsR family C628_RS05110 PF01026 TatD related DNase C628_RS05115 PF06737 Transglycosylase-like domain C628_RS05115 PF07501 G5 domain C628_RS05115 PF03990 G5-linked-Ubiquitin-like domain C628_RS05120 PF00398 Ribosomal RNA adenine dimethylase C628_RS05125 PF00288 GHMP kinases N terminal domain C628_RS05125 PF08544 GHMP kinases C terminal C628_RS05130 PF00005 ABC transporter C628_RS05130 PF16326 ABC transporter C-terminal domain C628_RS05130 PF12848 ABC transporter C628_RS05135 PF08543 Phosphomethylpyrimidine kinase C628_RS05140 PF00578 AhpC/TSA family C628_RS05155 PF03976 Polyphosphate kinase 2 (PPK2) C628_RS05165 PF00378 Enoyl-CoA hydratase/isomerase C628_RS05190 PF03176 MMPL family C628_RS05195 PF03737 Aldolase/RraA C628_RS05225 PF02653 Branched-chain amino acid transport system / permease component C628_RS05235 PF12399 Branched-chain amino acid ATP-binding cassette transporter C628_RS05235 PF00005 ABC transporter C628_RS05240 PF00005 ABC transporter C628_RS05245 PF01195 Peptidyl-tRNA hydrolase C628_RS05250 PF03060 Nitronate monooxygenase C628_RS05255 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C628_RS05255 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C628_RS05260 PF01195 Peptidyl-tRNA hydrolase C628_RS05265 PF14693 Ribosomal protein TL5, C-terminal domain C628_RS05265 PF01386 Ribosomal L25p family C628_RS05290 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C628_RS05290 PF14572 Phosphoribosyl synthetase-associated domain C628_RS05295 PF00132 Bacterial transferase hexapeptide (six repeats) C628_RS05295 PF12804 MobA-like NTP transferase domain C628_RS05305 PF07731 Multicopper oxidase C628_RS05305 PF07732 Multicopper oxidase C628_RS05310 PF00005 ABC transporter C628_RS05320 PF07730 Histidine kinase C628_RS05325 PF00196 Bacterial regulatory proteins, luxR family C628_RS05325 PF17874 MalT-like TPR region C628_RS05335 PF00664 ABC transporter transmembrane region C628_RS05335 PF00005 ABC transporter C628_RS05340 PF00664 ABC transporter transmembrane region C628_RS05340 PF00005 ABC transporter C628_RS05360 PF13610 DDE domain C628_RS05380 PF00440 Bacterial regulatory proteins, tetR family C628_RS05385 PF00270 DEAD/DEAH box helicase C628_RS05385 PF00271 Helicase conserved C-terminal domain C628_RS05385 PF03461 TRCF domain C628_RS05385 PF17757 UvrB interaction domain C628_RS05385 PF02559 CarD-like/TRCF domain C628_RS05390 PF00005 ABC transporter C628_RS05390 PF00664 ABC transporter transmembrane region C628_RS05395 PF00664 ABC transporter transmembrane region C628_RS05395 PF00005 ABC transporter C628_RS05400 PF09924 Uncharacterised conserved protein (DUF2156) C628_RS05405 PF00756 Putative esterase C628_RS05410 PF13520 Amino acid permease C628_RS05415 PF01527 Transposase C628_RS05420 PF13276 HTH-like domain C628_RS05420 PF13333 Integrase core domain C628_RS05420 PF00665 Integrase core domain C628_RS05425 PF13520 Amino acid permease C628_RS05435 PF03819 MazG nucleotide pyrophosphohydrolase domain C628_RS05455 PF00113 Enolase, C-terminal TIM barrel domain C628_RS05455 PF03952 Enolase, N-terminal domain C628_RS05470 PF02541 Ppx/GppA phosphatase family C628_RS05485 PF12833 Helix-turn-helix domain C628_RS05500 PF03449 Transcription elongation factor, N-terminal C628_RS05500 PF01272 Transcription elongation factor, GreA/GreB, C-term C628_RS05510 PF02585 GlcNAc-PI de-N-acetylase C628_RS05520 PF00793 DAHP synthetase I family C628_RS05525 PF01255 Putative undecaprenyl diphosphate synthase C628_RS05535 PF00485 Phosphoribulokinase / Uridine kinase family C628_RS05540 PF00464 Serine hydroxymethyltransferase C628_RS05545 PF00425 chorismate binding enzyme C628_RS05545 PF04715 Anthranilate synthase component I, N terminal region C628_RS05545 PF00117 Glutamine amidotransferase class-I C628_RS05580 PF03746 LamB/YcsF family C628_RS05585 PF01566 Natural resistance-associated macrophage protein C628_RS05590 PF00392 Bacterial regulatory proteins, gntR family C628_RS05590 PF07702 UTRA domain C628_RS05600 PF10415 Fumarase C C-terminus C628_RS05600 PF00206 Lyase C628_RS05605 PF01613 Flavin reductase like domain C628_RS05620 PF03358 NADPH-dependent FMN reductase C628_RS05625 PF00296 Luciferase-like monooxygenase C628_RS05640 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded C628_RS05655 PF07690 Major Facilitator Superfamily C628_RS05660 PF02609 Exonuclease VII small subunit C628_RS05665 PF02601 Exonuclease VII, large subunit C628_RS05665 PF13742 OB-fold nucleic acid binding domain C628_RS05670 PF02401 LytB protein C628_RS05680 PF01594 AI-2E family transporter C628_RS05690 PF00209 Sodium:neurotransmitter symporter family C628_RS05695 PF00756 Putative esterase C628_RS05695 PF08310 LGFP repeat C628_RS05700 PF01926 50S ribosome-binding GTPase C628_RS05700 PF06071 Protein of unknown function (DUF933) C628_RS05710 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ C628_RS05715 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH C628_RS05720 PF01638 HxlR-like helix-turn-helix C628_RS05735 PF00293 NUDIX domain C628_RS05750 PF00005 ABC transporter C628_RS05750 PF03459 TOBE domain C628_RS05760 PF13333 Integrase core domain C628_RS05760 PF13276 HTH-like domain C628_RS05760 PF00665 Integrase core domain C628_RS05765 PF01527 Transposase C628_RS05785 PF07690 Major Facilitator Superfamily C628_RS05805 PF11066 Protein of unknown function (DUF2867) C628_RS05805 PF13460 NAD(P)H-binding C628_RS05810 PF01740 STAS domain C628_RS05810 PF00916 Sulfate permease family C628_RS05835 PF00300 Histidine phosphatase superfamily (branch 1) C628_RS05850 PF00005 ABC transporter C628_RS05850 PF16326 ABC transporter C-terminal domain C628_RS05850 PF12848 ABC transporter C628_RS05860 PF03831 PhnA domain C628_RS05860 PF08274 PhnA Zinc-Ribbon C628_RS05870 PF07690 Major Facilitator Superfamily C628_RS05875 PF00266 Aminotransferase class-V C628_RS05880 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain C628_RS05880 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain C628_RS05885 PF02445 Quinolinate synthetase A protein C628_RS05900 PF12706 Beta-lactamase superfamily domain C628_RS05905 PF04237 YjbR C628_RS05910 PF03099 Biotin/lipoate A/B protein ligase family C628_RS05920 PF07690 Major Facilitator Superfamily C628_RS05925 PF01494 FAD binding domain C628_RS05930 PF09819 ABC-type cobalt transport system, permease component C628_RS05935 PF00005 ABC transporter C628_RS05955 PF01699 Sodium/calcium exchanger protein C628_RS05970 PF00005 ABC transporter C628_RS05970 PF17755 UvrA DNA-binding domain C628_RS05970 PF17760 UvrA interaction domain C628_RS05975 PF08534 Redoxin C628_RS05985 PF05661 Protein of unknown function (DUF808) C628_RS05990 PF08546 Ketopantoate reductase PanE/ApbA C terminal C628_RS05990 PF02558 Ketopantoate reductase PanE/ApbA C628_RS06000 PF00293 NUDIX domain C628_RS06010 PF00089 Trypsin C628_RS06015 PF03960 ArsC family C628_RS06035 PF14492 Elongation Factor G, domain II C628_RS06035 PF00009 Elongation factor Tu GTP binding domain C628_RS06035 PF03144 Elongation factor Tu domain 2 C628_RS06035 PF00679 Elongation factor G C-terminus C628_RS06040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C628_RS06045 PF02585 GlcNAc-PI de-N-acetylase C628_RS06055 PF00037 4Fe-4S binding domain C628_RS06060 PF00155 Aminotransferase class I and II C628_RS06075 PF14602 Hexapeptide repeat of succinyl-transferase C628_RS06075 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle C628_RS06080 PF00324 Amino acid permease C628_RS06085 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle C628_RS06085 PF14602 Hexapeptide repeat of succinyl-transferase C628_RS06090 PF07687 Peptidase dimerisation domain C628_RS06090 PF01546 Peptidase family M20/M25/M40 C628_RS06095 PF03641 Possible lysine decarboxylase C628_RS06100 PF00809 Pterin binding enzyme C628_RS06105 PF00535 Glycosyl transferase family 2 C628_RS06130 PF13439 Glycosyltransferase Family 4 C628_RS06130 PF00534 Glycosyl transferases group 1 C628_RS06135 PF00483 Nucleotidyl transferase C628_RS06140 PF01596 O-methyltransferase C628_RS06145 PF04542 Sigma-70 region 2 C628_RS06145 PF08281 Sigma-70, region 4 C628_RS06160 PF10609 NUBPL iron-transfer P-loop NTPase C628_RS06160 PF01883 Iron-sulfur cluster assembly protein C628_RS06190 PF16870 2-oxoglutarate dehydrogenase C-terminal C628_RS06190 PF02779 Transketolase, pyrimidine binding domain C628_RS06190 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C628_RS06190 PF16078 2-oxoglutarate dehydrogenase N-terminus C628_RS06190 PF00676 Dehydrogenase E1 component C628_RS06195 PF00005 ABC transporter C628_RS06195 PF00664 ABC transporter transmembrane region C628_RS06205 PF08501 Shikimate dehydrogenase substrate binding domain C628_RS06210 PF00135 Carboxylesterase family C628_RS06230 PF07690 Major Facilitator Superfamily C628_RS06235 PF07690 Major Facilitator Superfamily C628_RS06240 PF08267 Cobalamin-independent synthase, N-terminal domain C628_RS06240 PF01717 Cobalamin-independent synthase, Catalytic domain C628_RS06275 PF00664 ABC transporter transmembrane region C628_RS06275 PF00005 ABC transporter C628_RS06280 PF00005 ABC transporter C628_RS06280 PF00664 ABC transporter transmembrane region C628_RS06285 PF02322 Cytochrome bd terminal oxidase subunit II C628_RS06290 PF01654 Cytochrome bd terminal oxidase subunit I C628_RS06305 PF01527 Transposase C628_RS06315 PF00293 NUDIX domain C628_RS06325 PF00324 Amino acid permease C628_RS06330 PF03880 DbpA RNA binding domain C628_RS06330 PF00271 Helicase conserved C-terminal domain C628_RS06330 PF00270 DEAD/DEAH box helicase C628_RS06345 PF00474 Sodium:solute symporter family C628_RS06350 PF00176 SNF2 family N-terminal domain C628_RS06350 PF00271 Helicase conserved C-terminal domain C628_RS06350 PF12419 SNF2 Helicase protein C628_RS06375 PF01144 Coenzyme A transferase C628_RS06380 PF01144 Coenzyme A transferase C628_RS06385 PF01144 Coenzyme A transferase C628_RS06390 PF04264 YceI-like domain C628_RS06395 PF01047 MarR family C628_RS06410 PF00027 Cyclic nucleotide-binding domain C628_RS06410 PF13545 Crp-like helix-turn-helix domain C628_RS06415 PF00403 Heavy-metal-associated domain C628_RS06420 PF00403 Heavy-metal-associated domain C628_RS06425 PF04607 Region found in RelA / SpoT proteins C628_RS06440 PF00561 alpha/beta hydrolase fold C628_RS06445 PF03485 Arginyl tRNA synthetase N terminal domain C628_RS06445 PF00750 tRNA synthetases class I (R) C628_RS06445 PF05746 DALR anticodon binding domain C628_RS06450 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C628_RS06450 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C628_RS06465 PF03447 Homoserine dehydrogenase, NAD binding domain C628_RS06465 PF01842 ACT domain C628_RS06465 PF00742 Homoserine dehydrogenase C628_RS06470 PF00288 GHMP kinases N terminal domain C628_RS06480 PF02665 Nitrate reductase gamma subunit C628_RS06480 PF02613 Nitrate reductase delta subunit C628_RS06480 PF00384 Molybdopterin oxidoreductase C628_RS06490 PF14711 Respiratory nitrate reductase beta C-terminal C628_RS06490 PF13247 4Fe-4S dicluster domain C628_RS06495 PF01568 Molydopterin dinucleotide binding domain C628_RS06495 PF00384 Molybdopterin oxidoreductase C628_RS06500 PF07690 Major Facilitator Superfamily C628_RS06505 PF13936 Helix-turn-helix domain C628_RS06505 PF00665 Integrase core domain C628_RS06510 PF01967 MoaC family C628_RS06510 PF00994 Probable molybdopterin binding domain C628_RS06530 PF00571 CBS domain C628_RS06530 PF01595 Cyclin M transmembrane N-terminal domain C628_RS06530 PF03471 Transporter associated domain C628_RS06535 PF01595 Cyclin M transmembrane N-terminal domain C628_RS06535 PF03471 Transporter associated domain C628_RS06535 PF00571 CBS domain C628_RS06540 PF12804 MobA-like NTP transferase domain C628_RS06545 PF00994 Probable molybdopterin binding domain C628_RS06545 PF03453 MoeA N-terminal region (domain I and II) C628_RS06545 PF03454 MoeA C-terminal region (domain IV) C628_RS06550 PF04055 Radical SAM superfamily C628_RS06550 PF06463 Molybdenum Cofactor Synthesis C C628_RS06555 PF00501 AMP-binding enzyme C628_RS06555 PF13193 AMP-binding enzyme C-terminal domain C628_RS06560 PF07497 Rho termination factor, RNA-binding domain C628_RS06560 PF07498 Rho termination factor, N-terminal domain C628_RS06560 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C628_RS06560 PF07497 Rho termination factor, RNA-binding domain C628_RS06560 PF07498 Rho termination factor, N-terminal domain C628_RS06560 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C628_RS06565 PF03462 PCRF domain C628_RS06565 PF00472 RF-1 domain C628_RS06570 PF17827 PrmC N-terminal domain C628_RS06570 PF05175 Methyltransferase small domain C628_RS06575 PF01300 Telomere recombination C628_RS06580 PF00953 Glycosyl transferase family 4 C628_RS06595 PF00119 ATP synthase A chain C628_RS06600 PF00137 ATP synthase subunit C C628_RS06605 PF00430 ATP synthase B/B' CF(0) C628_RS06610 PF00213 ATP synthase delta (OSCP) subunit C628_RS06615 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C628_RS06615 PF02874 ATP synthase alpha/beta family, beta-barrel domain C628_RS06615 PF00306 ATP synthase alpha/beta chain, C terminal domain C628_RS06620 PF00231 ATP synthase C628_RS06625 PF02874 ATP synthase alpha/beta family, beta-barrel domain C628_RS06625 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C628_RS06630 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain C628_RS06640 PF01939 Endonuclease NucS C628_RS06655 PF01910 Thiamine-binding protein C628_RS06660 PF00085 Thioredoxin C628_RS06665 PF00296 Luciferase-like monooxygenase C628_RS06670 PF00528 Binding-protein-dependent transport system inner membrane component C628_RS06675 PF00005 ABC transporter C628_RS06680 PF09084 NMT1/THI5 like C628_RS06685 PF00128 Alpha amylase, catalytic domain C628_RS06685 PF02806 Alpha amylase, C-terminal all-beta domain C628_RS06685 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C628_RS06690 PF11896 Domain of unknown function (DUF3416) C628_RS06695 PF00005 ABC transporter C628_RS06715 PF01012 Electron transfer flavoprotein domain C628_RS06720 PF01012 Electron transfer flavoprotein domain C628_RS06720 PF00766 Electron transfer flavoprotein FAD-binding domain C628_RS06725 PF00266 Aminotransferase class-V C628_RS06740 PF01381 Helix-turn-helix C628_RS06775 PF07690 Major Facilitator Superfamily C628_RS06795 PF02686 Glu-tRNAGln amidotransferase C subunit C628_RS06800 PF01425 Amidase C628_RS06815 PF00365 Phosphofructokinase C628_RS06820 PF00356 Bacterial regulatory proteins, lacI family C628_RS06825 PF00005 ABC transporter C628_RS06830 PF05025 RbsD / FucU transport protein family C628_RS06845 PF01758 Sodium Bile acid symporter family C628_RS06850 PF02637 GatB domain C628_RS06850 PF02934 GatB/GatE catalytic domain C628_RS06860 PF00248 Aldo/keto reductase family C628_RS06865 PF01810 LysE type translocator C628_RS06870 PF03466 LysR substrate binding domain C628_RS06870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C628_RS06875 PF13409 Glutathione S-transferase, N-terminal domain C628_RS06890 PF00920 Dehydratase family C628_RS06900 PF00924 Mechanosensitive ion channel C628_RS06905 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C628_RS06905 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C628_RS06905 PF00205 Thiamine pyrophosphate enzyme, central domain C628_RS06910 PF10369 Small subunit of acetolactate synthase C628_RS06915 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain C628_RS06915 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain C628_RS06920 PF00005 ABC transporter C628_RS06925 PF00005 ABC transporter C628_RS06930 PF00528 Binding-protein-dependent transport system inner membrane component C628_RS06955 PF01613 Flavin reductase like domain C628_RS06960 PF16916 Dimerisation domain of Zinc Transporter C628_RS06960 PF01545 Cation efflux family C628_RS06975 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C628_RS06975 PF01842 ACT domain C628_RS06975 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C628_RS06995 PF00180 Isocitrate/isopropylmalate dehydrogenase C628_RS07015 PF01557 Fumarylacetoacetate (FAA) hydrolase family C628_RS07025 PF00425 chorismate binding enzyme C628_RS07030 PF00749 tRNA synthetases class I (E and Q), catalytic domain C628_RS07035 PF13443 Cro/C1-type HTH DNA-binding domain C628_RS07100 PF02384 N-6 DNA Methylase C628_RS07100 PF12161 HsdM N-terminal domain C628_RS07105 PF01555 DNA methylase C628_RS07145 PF11867 Domain of unknown function (DUF3387) C628_RS07145 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) C628_RS07145 PF18766 SWI2/SNF2 ATPase C628_RS07155 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system C628_RS07160 PF13361 UvrD-like helicase C-terminal domain C628_RS07160 PF00580 UvrD/REP helicase N-terminal domain C628_RS07160 PF12705 PD-(D/E)XK nuclease superfamily C628_RS07195 PF00114 Pilin (bacterial filament) C628_RS07195 PF07963 Prokaryotic N-terminal methylation motif C628_RS07200 PF01527 Transposase C628_RS07220 PF01964 Radical SAM ThiC family C628_RS07220 PF13667 ThiC-associated domain C628_RS07245 PF01964 Radical SAM ThiC family C628_RS07245 PF13667 ThiC-associated domain C628_RS07260 PF00343 Carbohydrate phosphorylase C628_RS07270 PF16123 Hydroxyacylglutathione hydrolase C-terminus C628_RS07270 PF00753 Metallo-beta-lactamase superfamily C628_RS07285 PF13291 ACT domain C628_RS07285 PF02824 TGS domain C628_RS07285 PF04607 Region found in RelA / SpoT proteins C628_RS07300 PF00694 Aconitase C-terminal domain C628_RS07305 PF00300 Histidine phosphatase superfamily (branch 1) C628_RS07305 PF00293 NUDIX domain C628_RS07315 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C628_RS07315 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C628_RS07320 PF01820 D-ala D-ala ligase N-terminus C628_RS07320 PF07478 D-ala D-ala ligase C-terminus C628_RS07330 PF00586 AIR synthase related protein, N-terminal domain C628_RS07330 PF02769 AIR synthase related protein, C-terminal domain C628_RS07335 PF03167 Uracil DNA glycosylase superfamily C628_RS07340 PF02734 DAK2 domain C628_RS07340 PF13684 Dihydroxyacetone kinase family C628_RS07345 PF00271 Helicase conserved C-terminal domain C628_RS07345 PF00270 DEAD/DEAH box helicase C628_RS07345 PF17191 RecG wedge domain C628_RS07360 PF01467 Cytidylyltransferase-like C628_RS07365 PF00005 ABC transporter C628_RS07370 PF00528 Binding-protein-dependent transport system inner membrane component C628_RS07375 PF00497 Bacterial extracellular solute-binding proteins, family 3 C628_RS07410 PF13333 Integrase core domain C628_RS07410 PF00665 Integrase core domain C628_RS07410 PF13276 HTH-like domain C628_RS07415 PF01527 Transposase C628_RS07455 PF01527 Transposase C628_RS07460 PF13333 Integrase core domain C628_RS07460 PF13276 HTH-like domain C628_RS07460 PF00665 Integrase core domain C628_RS07505 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C628_RS07505 PF00476 DNA polymerase family A C628_RS07505 PF01367 5'-3' exonuclease, C-terminal SAM fold C628_RS07510 PF07690 Major Facilitator Superfamily C628_RS07520 PF00248 Aldo/keto reductase family C628_RS07525 PF01209 ubiE/COQ5 methyltransferase family C628_RS07530 PF00575 S1 RNA binding domain C628_RS07535 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C628_RS07535 PF00367 phosphotransferase system, EIIB C628_RS07535 PF02378 Phosphotransferase system, EIIC C628_RS07540 PF01121 Dephospho-CoA kinase C628_RS07550 PF00665 Integrase core domain C628_RS07550 PF13276 HTH-like domain C628_RS07550 PF13333 Integrase core domain C628_RS07555 PF01527 Transposase C628_RS07575 PF01156 Inosine-uridine preferring nucleoside hydrolase C628_RS07580 PF07690 Major Facilitator Superfamily C628_RS07585 PF00294 pfkB family carbohydrate kinase C628_RS07590 PF00356 Bacterial regulatory proteins, lacI family C628_RS07605 PF01527 Transposase C628_RS07610 PF00005 ABC transporter C628_RS07610 PF02687 FtsX-like permease family C628_RS07610 PF12704 MacB-like periplasmic core domain C628_RS07620 PF04851 Type III restriction enzyme, res subunit C628_RS07620 PF17757 UvrB interaction domain C628_RS07620 PF12344 Ultra-violet resistance protein B C628_RS07620 PF02151 UvrB/uvrC motif C628_RS07620 PF00271 Helicase conserved C-terminal domain C628_RS07625 PF00582 Universal stress protein family C628_RS07630 PF01638 HxlR-like helix-turn-helix C628_RS07635 PF13333 Integrase core domain C628_RS07635 PF00665 Integrase core domain C628_RS07635 PF13276 HTH-like domain C628_RS07640 PF01527 Transposase C628_RS07645 PF05368 NmrA-like family C628_RS07650 PF13538 UvrD-like helicase C-terminal domain C628_RS07660 PF00753 Metallo-beta-lactamase superfamily C628_RS07665 PF17760 UvrA interaction domain C628_RS07665 PF00005 ABC transporter C628_RS07665 PF17755 UvrA DNA-binding domain C628_RS07675 PF00707 Translation initiation factor IF-3, C-terminal domain C628_RS07675 PF05198 Translation initiation factor IF-3, N-terminal domain C628_RS07680 PF01632 Ribosomal protein L35 C628_RS07685 PF00453 Ribosomal protein L20 C628_RS07695 PF00528 Binding-protein-dependent transport system inner membrane component C628_RS07700 PF01527 Transposase C628_RS07710 PF00665 Integrase core domain C628_RS07710 PF13276 HTH-like domain C628_RS07720 PF00528 Binding-protein-dependent transport system inner membrane component C628_RS07730 PF17912 MalK OB fold domain C628_RS07730 PF00005 ABC transporter C628_RS07740 PF08032 RNA 2'-O ribose methyltransferase substrate binding C628_RS07740 PF00588 SpoU rRNA Methylase family C628_RS07745 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain C628_RS07745 PF01409 tRNA synthetases class II core domain (F) C628_RS07750 PF03484 tRNA synthetase B5 domain C628_RS07750 PF01588 Putative tRNA binding domain C628_RS07750 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain C628_RS07750 PF03483 B3/4 domain C628_RS07750 PF03147 Ferredoxin-fold anticodon binding domain C628_RS07760 PF01757 Acyltransferase family C628_RS07770 PF01118 Semialdehyde dehydrogenase, NAD binding domain C628_RS07770 PF02774 Semialdehyde dehydrogenase, dimerisation domain C628_RS07775 PF01960 ArgJ family C628_RS07780 PF00696 Amino acid kinase family C628_RS07785 PF00202 Aminotransferase class-III C628_RS07790 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C628_RS07790 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C628_RS07795 PF01316 Arginine repressor, DNA binding domain C628_RS07795 PF02863 Arginine repressor, C-terminal domain C628_RS07800 PF00764 Arginosuccinate synthase C628_RS07805 PF00206 Lyase C628_RS07805 PF14698 Argininosuccinate lyase C-terminal C628_RS07825 PF03966 Trm112p-like protein C628_RS07830 PF00579 tRNA synthetases class I (W and Y) C628_RS07865 PF18407 GCN5-related N-acetyltransferase like domain C628_RS07865 PF13344 Haloacid dehalogenase-like hydrolase C628_RS07875 PF01479 S4 domain C628_RS07875 PF01728 FtsJ-like methyltransferase C628_RS07880 PF01513 ATP-NAD kinase C628_RS07885 PF02463 RecF/RecN/SMC N terminal domain C628_RS07895 PF11382 Copper transport outer membrane protein, MctB C628_RS07900 PF00117 Glutamine amidotransferase class-I C628_RS07900 PF06418 CTP synthase N-terminus C628_RS07905 PF00293 NUDIX domain C628_RS07910 PF02899 Phage integrase, N-terminal SAM-like domain C628_RS07910 PF00589 Phage integrase family C628_RS07915 PF00005 ABC transporter C628_RS07920 PF13614 AAA domain C628_RS07925 PF02616 Segregation and condensation protein ScpA C628_RS07935 PF00581 Rhodanese-like domain C628_RS07940 PF04079 Segregation and condensation complex subunit ScpB C628_RS07945 PF01479 S4 domain C628_RS07945 PF00849 RNA pseudouridylate synthase C628_RS07950 PF02224 Cytidylate kinase C628_RS07955 PF01926 50S ribosome-binding GTPase C628_RS07955 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C628_RS07970 PF08241 Methyltransferase domain C628_RS07975 PF00005 ABC transporter C628_RS07975 PF00664 ABC transporter transmembrane region C628_RS07980 PF00005 ABC transporter C628_RS07980 PF00664 ABC transporter transmembrane region C628_RS07985 PF02535 ZIP Zinc transporter C628_RS07990 PF00999 Sodium/hydrogen exchanger family C628_RS08005 PF02810 SEC-C motif C628_RS08015 PF07516 SecA Wing and Scaffold domain C628_RS08015 PF01043 SecA preprotein cross-linking domain C628_RS08015 PF07517 SecA DEAD-like domain C628_RS08020 PF00498 FHA domain C628_RS08025 PF00376 MerR family regulatory protein C628_RS08035 PF13411 MerR HTH family regulatory protein C628_RS08055 PF00571 CBS domain C628_RS08055 PF01595 Cyclin M transmembrane N-terminal domain C628_RS08060 PF00571 CBS domain C628_RS08060 PF01595 Cyclin M transmembrane N-terminal domain C628_RS08060 PF03471 Transporter associated domain C628_RS08065 PF00270 DEAD/DEAH box helicase C628_RS08065 PF00271 Helicase conserved C-terminal domain C628_RS08075 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain C628_RS08075 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C628_RS08090 PF00005 ABC transporter C628_RS08105 PF00528 Binding-protein-dependent transport system inner membrane component C628_RS08110 PF00528 Binding-protein-dependent transport system inner membrane component C628_RS08115 PF00005 ABC transporter C628_RS08130 PF08543 Phosphomethylpyrimidine kinase C628_RS08130 PF03070 TENA/THI-4/PQQC family C628_RS08130 PF02581 Thiamine monophosphate synthase C628_RS08135 PF02110 Hydroxyethylthiazole kinase family C628_RS08140 PF07992 Pyridine nucleotide-disulphide oxidoreductase C628_RS08140 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C628_RS08150 PF07690 Major Facilitator Superfamily C628_RS08150 PF00083 Sugar (and other) transporter C628_RS08155 PF00156 Phosphoribosyl transferase domain C628_RS08160 PF02659 Putative manganese efflux pump C628_RS08180 PF01740 STAS domain C628_RS08180 PF00916 Sulfate permease family C628_RS08205 PF13397 RNA polymerase-binding protein C628_RS08210 PF00535 Glycosyl transferase family 2 C628_RS08215 PF00795 Carbon-nitrogen hydrolase C628_RS08215 PF00535 Glycosyl transferase family 2 C628_RS08235 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C628_RS08240 PF00106 short chain dehydrogenase C628_RS08245 PF00557 Metallopeptidase family M24 C628_RS08245 PF01321 Creatinase/Prolidase N-terminal domain C628_RS08250 PF00089 Trypsin C628_RS08255 PF08148 DSHCT (NUC185) domain C628_RS08255 PF00271 Helicase conserved C-terminal domain C628_RS08255 PF00270 DEAD/DEAH box helicase C628_RS08260 PF00902 Sec-independent protein translocase protein (TatC) C628_RS08265 PF02416 mttA/Hcf106 family C628_RS08270 PF13280 WYL domain C628_RS08275 PF13280 WYL domain C628_RS08280 PF03136 Pup-ligase protein C628_RS08285 PF05639 Pup-like protein C628_RS08290 PF03136 Pup-ligase protein C628_RS08295 PF17758 Proteasomal ATPase OB N-terminal domain C628_RS08295 PF16450 Proteasomal ATPase OB C-terminal domain C628_RS08295 PF00004 ATPase family associated with various cellular activities (AAA) C628_RS08300 PF08704 tRNA methyltransferase complex GCD14 subunit C628_RS08305 PF02127 Aminopeptidase I zinc metalloprotease (M18) C628_RS08320 PF07690 Major Facilitator Superfamily C628_RS08325 PF10415 Fumarase C C-terminus C628_RS08325 PF00206 Lyase C628_RS08330 PF08029 HisG, C-terminal domain C628_RS08330 PF01634 ATP phosphoribosyltransferase C628_RS08335 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase C628_RS08340 PF13419 Haloacid dehalogenase-like hydrolase C628_RS08345 PF02574 Homocysteine S-methyltransferase C628_RS08345 PF00809 Pterin binding enzyme C628_RS08345 PF02965 Vitamin B12 dependent methionine synthase, activation domain C628_RS08345 PF02310 B12 binding domain C628_RS08345 PF02607 B12 binding domain C628_RS08360 PF01758 Sodium Bile acid symporter family C628_RS08365 PF01451 Low molecular weight phosphotyrosine protein phosphatase C628_RS08370 PF01451 Low molecular weight phosphotyrosine protein phosphatase C628_RS08380 PF01406 tRNA synthetases class I (C) catalytic domain C628_RS08385 PF02673 Bacitracin resistance protein BacA C628_RS08390 PF00248 Aldo/keto reductase family C628_RS08400 PF01180 Dihydroorotate dehydrogenase C628_RS08415 PF01161 Phosphatidylethanolamine-binding protein C628_RS08420 PF00005 ABC transporter C628_RS08420 PF00664 ABC transporter transmembrane region C628_RS08425 PF00005 ABC transporter C628_RS08425 PF00664 ABC transporter transmembrane region C628_RS08455 PF01642 Methylmalonyl-CoA mutase C628_RS08455 PF02310 B12 binding domain C628_RS08460 PF01642 Methylmalonyl-CoA mutase C628_RS08475 PF01145 SPFH domain / Band 7 family C628_RS08495 PF00762 Ferrochelatase C628_RS08500 PF00877 NlpC/P60 family C628_RS08510 PF00694 Aconitase C-terminal domain C628_RS08510 PF00330 Aconitase family (aconitate hydratase) C628_RS08515 PF00440 Bacterial regulatory proteins, tetR family C628_RS08540 PF05167 Uncharacterised ACR (DUF711) C628_RS08545 PF00689 Cation transporting ATPase, C-terminus C628_RS08545 PF00690 Cation transporter/ATPase, N-terminus C628_RS08585 PF14659 Phage integrase, N-terminal SAM-like domain C628_RS08585 PF00589 Phage integrase family C628_RS08595 PF16326 ABC transporter C-terminal domain C628_RS08595 PF00005 ABC transporter C628_RS08595 PF12848 ABC transporter C628_RS08615 PF01883 Iron-sulfur cluster assembly protein C628_RS08620 PF01592 NifU-like N terminal domain C628_RS08625 PF00266 Aminotransferase class-V C628_RS08630 PF00005 ABC transporter C628_RS08635 PF01458 Uncharacterized protein family (UPF0051) C628_RS08640 PF01458 Uncharacterized protein family (UPF0051) C628_RS08655 PF13732 Domain of unknown function (DUF4162) C628_RS08655 PF00005 ABC transporter C628_RS08675 PF08240 Alcohol dehydrogenase GroES-like domain C628_RS08675 PF00107 Zinc-binding dehydrogenase C628_RS08680 PF01040 UbiA prenyltransferase family C628_RS08685 PF02779 Transketolase, pyrimidine binding domain C628_RS08685 PF00456 Transketolase, thiamine diphosphate binding domain C628_RS08685 PF02780 Transketolase, C-terminal domain C628_RS08690 PF00923 Transaldolase/Fructose-6-phosphate aldolase C628_RS08695 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain C628_RS08695 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain C628_RS08705 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase C628_RS08715 PF02423 Ornithine cyclodeaminase/mu-crystallin family C628_RS08720 PF00909 Ammonium Transporter Family C628_RS08725 PF03840 Preprotein translocase SecG subunit C628_RS08730 PF00311 Phosphoenolpyruvate carboxylase C628_RS08735 PF00121 Triosephosphate isomerase C628_RS08740 PF00162 Phosphoglycerate kinase C628_RS08745 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C628_RS08745 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C628_RS08750 PF02650 WhiA C-terminal HTH domain C628_RS08750 PF14527 WhiA LAGLIDADG-like domain C628_RS08750 PF10298 WhiA N-terminal LAGLIDADG-like domain C628_RS08755 PF01933 Uncharacterised protein family UPF0052 C628_RS08760 PF03668 P-loop ATPase protein family C628_RS08765 PF08459 UvrC Helix-hairpin-helix N-terminal C628_RS08765 PF02151 UvrB/uvrC motif C628_RS08765 PF01541 GIY-YIG catalytic domain C628_RS08775 PF00885 6,7-dimethyl-8-ribityllumazine synthase C628_RS08780 PF00925 GTP cyclohydrolase II C628_RS08780 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C628_RS08785 PF00677 Lumazine binding domain C628_RS08790 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C628_RS08790 PF01872 RibD C-terminal domain C628_RS08795 PF00834 Ribulose-phosphate 3 epimerase family C628_RS08800 PF01189 16S rRNA methyltransferase RsmB/F C628_RS08800 PF01029 NusB family C628_RS08805 PF00551 Formyl transferase C628_RS08805 PF02911 Formyl transferase, C-terminal domain C628_RS08810 PF01327 Polypeptide deformylase C628_RS08815 PF17764 3′ DNA-binding domain (3′BD) C628_RS08820 PF02773 S-adenosylmethionine synthetase, C-terminal domain C628_RS08820 PF00438 S-adenosylmethionine synthetase, N-terminal domain C628_RS08820 PF02772 S-adenosylmethionine synthetase, central domain C628_RS08825 PF02441 Flavoprotein C628_RS08825 PF04127 DNA / pantothenate metabolism flavoprotein C628_RS08830 PF01192 RNA polymerase Rpb6 C628_RS08835 PF00625 Guanylate kinase C628_RS08845 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C628_RS08855 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C628_RS08855 PF00117 Glutamine amidotransferase class-I C628_RS08860 PF01979 Amidohydrolase family C628_RS08865 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C628_RS08865 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C628_RS08870 PF00156 Phosphoribosyl transferase domain C628_RS08875 PF01370 NAD dependent epimerase/dehydratase family C628_RS08875 PF08338 Domain of unknown function (DUF1731) C628_RS08895 PF01029 NusB family C628_RS08900 PF01132 Elongation factor P (EF-P) OB domain C628_RS08900 PF09285 Elongation factor P, C-terminal C628_RS08900 PF08207 Elongation factor P (EF-P) KOW-like domain C628_RS08905 PF00557 Metallopeptidase family M24 C628_RS08905 PF01321 Creatinase/Prolidase N-terminal domain C628_RS08910 PF01761 3-dehydroquinate synthase C628_RS08915 PF01202 Shikimate kinase C628_RS08920 PF01264 Chorismate synthase C628_RS08935 PF01032 FecCD transport family C628_RS08945 PF00005 ABC transporter C628_RS08950 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C628_RS08950 PF08501 Shikimate dehydrogenase substrate binding domain C628_RS08955 PF02618 YceG-like family C628_RS08960 PF03652 Holliday junction resolvase C628_RS08965 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C628_RS08965 PF01411 tRNA synthetases class II (A) C628_RS08965 PF02272 DHHA1 domain C628_RS08970 PF16193 AAA C-terminal domain C628_RS08970 PF12002 MgsA AAA+ ATPase C terminal C628_RS08970 PF00004 ATPase family associated with various cellular activities (AAA) C628_RS08980 PF01336 OB-fold nucleic acid binding domain C628_RS08980 PF02938 GAD domain C628_RS08980 PF00152 tRNA synthetases class II (D, K and N) C628_RS08985 PF04228 Putative neutral zinc metallopeptidase C628_RS08990 PF04434 SWIM zinc finger C628_RS08990 PF00176 SNF2 family N-terminal domain C628_RS08990 PF00271 Helicase conserved C-terminal domain C628_RS09015 PF00296 Luciferase-like monooxygenase C628_RS09020 PF03358 NADPH-dependent FMN reductase C628_RS09025 PF03315 Serine dehydratase beta chain C628_RS09025 PF03313 Serine dehydratase alpha chain C628_RS09030 PF16901 C-terminal domain of alpha-glycerophosphate oxidase C628_RS09030 PF01266 FAD dependent oxidoreductase C628_RS09035 PF03129 Anticodon binding domain C628_RS09035 PF13393 Histidyl-tRNA synthetase C628_RS09040 PF00753 Metallo-beta-lactamase superfamily C628_RS09045 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C628_RS09060 PF04607 Region found in RelA / SpoT proteins C628_RS09060 PF13291 ACT domain C628_RS09060 PF02824 TGS domain C628_RS09065 PF00156 Phosphoribosyl transferase domain C628_RS09070 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C628_RS09075 PF07549 SecD/SecF GG Motif C628_RS09075 PF02355 Protein export membrane protein C628_RS09080 PF02355 Protein export membrane protein C628_RS09080 PF07549 SecD/SecF GG Motif C628_RS09085 PF02699 Preprotein translocase subunit C628_RS09090 PF17864 RuvB AAA lid domain C628_RS09090 PF05496 Holliday junction DNA helicase RuvB P-loop domain C628_RS09090 PF05491 RuvB C-terminal winged helix domain C628_RS09095 PF07499 RuvA, C-terminal domain C628_RS09095 PF01330 RuvA N terminal domain C628_RS09100 PF02075 Crossover junction endodeoxyribonuclease RuvC C628_RS09105 PF01709 Transcriptional regulator C628_RS09125 PF13439 Glycosyltransferase Family 4 C628_RS09130 PF03279 Bacterial lipid A biosynthesis acyltransferase C628_RS09135 PF01066 CDP-alcohol phosphatidyltransferase C628_RS09140 PF01230 HIT domain C628_RS09145 PF03129 Anticodon binding domain C628_RS09145 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C628_RS09145 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C628_RS09150 PF04261 Dyp-type peroxidase family C628_RS09150 PF10518 TAT (twin-arginine translocation) pathway signal sequence C628_RS09155 PF04314 Copper chaperone PCu(A)C C628_RS09165 PF13333 Integrase core domain C628_RS09165 PF13276 HTH-like domain C628_RS09165 PF00665 Integrase core domain C628_RS09210 PF00939 Sodium:sulfate symporter transmembrane region C628_RS09215 PF02595 Glycerate kinase family C628_RS09230 PF09594 Glycosyltransferase family 87 C628_RS09235 PF01641 SelR domain C628_RS09240 PF06778 Chlorite dismutase C628_RS09250 PF00570 HRDC domain C628_RS09250 PF01612 3'-5' exonuclease C628_RS09255 PF02779 Transketolase, pyrimidine binding domain C628_RS09255 PF02780 Transketolase, C-terminal domain C628_RS09255 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C628_RS09260 PF01938 TRAM domain C628_RS09260 PF05958 tRNA (Uracil-5-)-methyltransferase C628_RS09270 PF00692 dUTPase C628_RS09290 PF00459 Inositol monophosphatase family C628_RS09295 PF00480 ROK family C628_RS09300 PF04545 Sigma-70, region 4 C628_RS09300 PF04539 Sigma-70 region 3 C628_RS09300 PF04542 Sigma-70 region 2 C628_RS09300 PF00140 Sigma-70 factor, region 1.2 C628_RS09305 PF04235 Protein of unknown function (DUF418) C628_RS09315 PF04851 Type III restriction enzyme, res subunit C628_RS09335 PF02580 D-Tyr-tRNA(Tyr) deacylase C628_RS09340 PF04539 Sigma-70 region 3 C628_RS09340 PF04542 Sigma-70 region 2 C628_RS09340 PF00140 Sigma-70 factor, region 1.2 C628_RS09340 PF04545 Sigma-70, region 4 C628_RS09345 PF02742 Iron dependent repressor, metal binding and dimerisation domain C628_RS09345 PF01325 Iron dependent repressor, N-terminal DNA binding domain C628_RS09345 PF18357 Diphteria toxin repressor SH3 domain C628_RS09350 PF01370 NAD dependent epimerase/dehydratase family C628_RS09365 PF00271 Helicase conserved C-terminal domain C628_RS09365 PF08148 DSHCT (NUC185) domain C628_RS09365 PF00270 DEAD/DEAH box helicase C628_RS09370 PF03466 LysR substrate binding domain C628_RS09370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C628_RS09380 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold C628_RS09380 PF00271 Helicase conserved C-terminal domain C628_RS09380 PF04408 Helicase associated domain (HA2) C628_RS09380 PF11898 Domain of unknown function (DUF3418) C628_RS09380 PF00270 DEAD/DEAH box helicase C628_RS09385 PF03477 ATP cone domain C628_RS09395 PF01726 LexA DNA binding domain C628_RS09395 PF00717 Peptidase S24-like C628_RS09400 PF00455 DeoR C terminal sensor domain C628_RS09400 PF08220 DeoR-like helix-turn-helix domain C628_RS09410 PF02896 PEP-utilising enzyme, TIM barrel domain C628_RS09410 PF00391 PEP-utilising enzyme, mobile domain C628_RS09410 PF05524 PEP-utilising enzyme, N-terminal C628_RS09420 PF00294 pfkB family carbohydrate kinase C628_RS09425 PF02378 Phosphotransferase system, EIIC C628_RS09425 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C628_RS09440 PF00860 Permease family C628_RS09445 PF01926 50S ribosome-binding GTPase C628_RS09445 PF16360 GTP-binding GTPase Middle Region C628_RS09445 PF13167 GTP-binding GTPase N-terminal C628_RS09460 PF01678 Diaminopimelate epimerase C628_RS09475 PF03993 Domain of Unknown Function (DUF349) C628_RS09490 PF00919 Uncharacterized protein family UPF0004 C628_RS09490 PF04055 Radical SAM superfamily C628_RS09495 PF00005 ABC transporter C628_RS09500 PF00497 Bacterial extracellular solute-binding proteins, family 3 C628_RS09505 PF00528 Binding-protein-dependent transport system inner membrane component C628_RS09510 PF00528 Binding-protein-dependent transport system inner membrane component C628_RS09515 PF02631 RecX family C628_RS09520 PF00154 recA bacterial DNA recombination protein C628_RS09535 PF02632 BioY family C628_RS09540 PF00005 ABC transporter C628_RS09545 PF02361 Cobalt transport protein C628_RS09550 PF04012 PspA/IM30 family C628_RS09560 PF00994 Probable molybdopterin binding domain C628_RS09560 PF02464 Competence-damaged protein C628_RS09560 PF18146 Damage-inducible protein CinA KH domain C628_RS09565 PF01066 CDP-alcohol phosphatidyltransferase C628_RS09580 PF03741 Integral membrane protein TerC family C628_RS09585 PF01580 FtsK/SpoIIIE family C628_RS09585 PF09397 Ftsk gamma domain C628_RS09585 PF17854 FtsK alpha domain C628_RS09585 PF13491 4TM region of DNA translocase FtsK/SpoIIIE C628_RS09595 PF17770 Ribonuclease J C-terminal domain C628_RS09595 PF12706 Beta-lactamase superfamily domain C628_RS09595 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain C628_RS09600 PF00701 Dihydrodipicolinate synthetase family C628_RS09605 PF02511 Thymidylate synthase complementing protein C628_RS09610 PF05173 Dihydrodipicolinate reductase, C-terminus C628_RS09610 PF01113 Dihydrodipicolinate reductase, N-terminus C628_RS09620 PF00575 S1 RNA binding domain C628_RS09620 PF01138 3' exoribonuclease family, domain 1 C628_RS09620 PF00013 KH domain C628_RS09620 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain C628_RS09625 PF00312 Ribosomal protein S15 C628_RS09630 PF01156 Inosine-uridine preferring nucleoside hydrolase C628_RS09635 PF01687 Riboflavin kinase C628_RS09635 PF06574 FAD synthetase C628_RS09640 PF09142 tRNA Pseudouridine synthase II, C terminal C628_RS09640 PF01509 TruB family pseudouridylate synthase (N terminal domain) C628_RS09640 PF16198 tRNA pseudouridylate synthase B C-terminal domain C628_RS09645 PF17837 4'-phosphopantetheinyl transferase N-terminal domain C628_RS09645 PF01648 4'-phosphopantetheinyl transferase superfamily C628_RS09650 PF00149 Calcineurin-like phosphoesterase C628_RS09660 PF01368 DHH family C628_RS09660 PF02272 DHHA1 domain C628_RS09665 PF02033 Ribosome-binding factor A C628_RS09670 PF11987 Translation-initiation factor 2 C628_RS09670 PF04760 Translation initiation factor IF-2, N-terminal region C628_RS09670 PF00009 Elongation factor Tu GTP binding domain C628_RS09680 PF13184 NusA-like KH domain C628_RS09680 PF08529 NusA N-terminal domain C628_RS09685 PF02576 RimP N-terminal domain C628_RS09685 PF17384 RimP C-terminal SH3 domain C628_RS09695 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C628_RS09700 PF00528 Binding-protein-dependent transport system inner membrane component C628_RS09705 PF12911 N-terminal TM domain of oligopeptide transport permease C C628_RS09705 PF00528 Binding-protein-dependent transport system inner membrane component C628_RS09710 PF00005 ABC transporter C628_RS09710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C628_RS09715 PF01527 Transposase C628_RS09720 PF00665 Integrase core domain C628_RS09720 PF13333 Integrase core domain C628_RS09720 PF13276 HTH-like domain C628_RS09730 PF03129 Anticodon binding domain C628_RS09730 PF04073 Aminoacyl-tRNA editing domain C628_RS09730 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C628_RS09735 PF03883 Peroxide stress protein YaaA C628_RS09740 PF13519 von Willebrand factor type A domain C628_RS09740 PF07728 AAA domain (dynein-related subfamily) C628_RS09740 PF17863 AAA lid domain C628_RS09745 PF13519 von Willebrand factor type A domain C628_RS09745 PF17863 AAA lid domain C628_RS09745 PF07728 AAA domain (dynein-related subfamily) C628_RS09750 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C628_RS09765 PF06039 Malate:quinone oxidoreductase (Mqo) C628_RS09775 PF07992 Pyridine nucleotide-disulphide oxidoreductase C628_RS09775 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C628_RS09785 PF00557 Metallopeptidase family M24 C628_RS09795 PF00072 Response regulator receiver domain C628_RS09795 PF00196 Bacterial regulatory proteins, luxR family C628_RS09800 PF00672 HAMP domain C628_RS09800 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term C628_RS09800 PF07730 Histidine kinase C628_RS09800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C628_RS09805 PF02687 FtsX-like permease family C628_RS09810 PF12704 MacB-like periplasmic core domain C628_RS09810 PF00005 ABC transporter C628_RS09810 PF02687 FtsX-like permease family C628_RS09815 PF04551 GcpE protein C628_RS09820 PF17820 PDZ domain C628_RS09820 PF02163 Peptidase family M50 C628_RS09830 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase C628_RS09830 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain C628_RS09830 PF13288 DXP reductoisomerase C-terminal domain C628_RS09835 PF10939 Protein of unknown function (DUF2631) C628_RS09845 PF00005 ABC transporter C628_RS09850 PF04055 Radical SAM superfamily C628_RS09865 PF01765 Ribosome recycling factor C628_RS09870 PF00696 Amino acid kinase family C628_RS09875 PF00889 Elongation factor TS C628_RS09880 PF00318 Ribosomal protein S2 C628_RS09890 PF02899 Phage integrase, N-terminal SAM-like domain C628_RS09890 PF00589 Phage integrase family C628_RS09895 PF17782 DprA winged helix domain C628_RS09895 PF02481 DNA recombination-mediator protein A C628_RS09905 PF02021 Uncharacterised protein family UPF0102 C628_RS09910 PF10611 Protein of unknown function (DUF2469) C628_RS09915 PF01351 Ribonuclease HII C628_RS09920 PF10502 Signal peptidase, peptidase S26 C628_RS09930 PF01245 Ribosomal protein L19 C628_RS09935 PF02581 Thiamine monophosphate synthase C628_RS09940 PF01266 FAD dependent oxidoreductase C628_RS09940 PF05690 Thiazole biosynthesis protein ThiG C628_RS09950 PF05690 Thiazole biosynthesis protein ThiG C628_RS09955 PF00899 ThiF family C628_RS09960 PF17674 HHH domain C628_RS09960 PF09371 Tex-like protein N-terminal domain C628_RS09960 PF00575 S1 RNA binding domain C628_RS09960 PF16921 Tex protein YqgF-like domain C628_RS09965 PF00356 Bacterial regulatory proteins, lacI family C628_RS09970 PF00939 Sodium:sulfate symporter transmembrane region C628_RS09975 PF10397 Adenylosuccinate lyase C-terminus C628_RS09975 PF00206 Lyase C628_RS09990 PF01746 tRNA (Guanine-1)-methyltransferase C628_RS10000 PF01782 RimM N-terminal domain C628_RS10000 PF05239 PRC-barrel domain C628_RS10010 PF00886 Ribosomal protein S16 C628_RS10025 PF00005 ABC transporter C628_RS10025 PF13732 Domain of unknown function (DUF4162) C628_RS10030 PF00448 SRP54-type protein, GTPase domain C628_RS10030 PF02881 SRP54-type protein, helical bundle domain C628_RS10030 PF02978 Signal peptide binding domain C628_RS10035 PF01909 Nucleotidyltransferase domain C628_RS10035 PF01966 HD domain C628_RS10040 PF00543 Nitrogen regulatory protein P-II C628_RS10045 PF00909 Ammonium Transporter Family C628_RS10050 PF02881 SRP54-type protein, helical bundle domain C628_RS10050 PF00448 SRP54-type protein, GTPase domain C628_RS10060 PF02463 RecF/RecN/SMC N terminal domain C628_RS10060 PF06470 SMC proteins Flexible Hinge Domain C628_RS10065 PF00708 Acylphosphatase C628_RS10095 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain C628_RS10095 PF06827 Zinc finger found in FPG and IleRS C628_RS10095 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain C628_RS10100 PF14622 Ribonuclease-III-like C628_RS10100 PF00035 Double-stranded RNA binding motif C628_RS10115 PF00664 ABC transporter transmembrane region C628_RS10115 PF00005 ABC transporter C628_RS10120 PF00664 ABC transporter transmembrane region C628_RS10120 PF00005 ABC transporter C628_RS10125 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C628_RS10125 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C628_RS10130 PF02595 Glycerate kinase family C628_RS10145 PF07687 Peptidase dimerisation domain C628_RS10145 PF01546 Peptidase family M20/M25/M40 C628_RS10165 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C628_RS10170 PF00224 Pyruvate kinase, barrel domain C628_RS10170 PF02887 Pyruvate kinase, alpha/beta domain C628_RS10175 PF01790 Prolipoprotein diacylglyceryl transferase C628_RS10180 PF00218 Indole-3-glycerol phosphate synthase C628_RS10190 PF01502 Phosphoribosyl-AMP cyclohydrolase C628_RS10195 PF00977 Histidine biosynthesis protein C628_RS10200 PF00459 Inositol monophosphatase family C628_RS10205 PF00977 Histidine biosynthesis protein C628_RS10210 PF00117 Glutamine amidotransferase class-I C628_RS10225 PF00475 Imidazoleglycerol-phosphate dehydratase C628_RS10230 PF00155 Aminotransferase class I and II C628_RS10235 PF00815 Histidinol dehydrogenase C628_RS10260 PF00128 Alpha amylase, catalytic domain C628_RS10260 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C628_RS10265 PF13649 Methyltransferase domain C628_RS10275 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C628_RS10275 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C628_RS10280 PF00356 Bacterial regulatory proteins, lacI family C628_RS10295 PF00005 ABC transporter C628_RS10300 PF01032 FecCD transport family C628_RS10325 PF00128 Alpha amylase, catalytic domain C628_RS10350 PF01205 Uncharacterized protein family UPF0029 C628_RS10350 PF09186 Domain of unknown function (DUF1949) C628_RS10360 PF00585 C-terminal regulatory domain of Threonine dehydratase C628_RS10360 PF00291 Pyridoxal-phosphate dependent enzyme C628_RS10370 PF01717 Cobalamin-independent synthase, Catalytic domain C628_RS10370 PF08267 Cobalamin-independent synthase, N-terminal domain C628_RS10375 PF14579 Helix-hairpin-helix motif C628_RS10375 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C628_RS10375 PF07733 Bacterial DNA polymerase III alpha NTPase domain C628_RS10375 PF02811 PHP domain C628_RS10380 PF00892 EamA-like transporter family C628_RS10390 PF00849 RNA pseudouridylate synthase C628_RS10395 PF01252 Signal peptidase (SPase) II C628_RS10405 PF00005 ABC transporter C628_RS10415 PF17763 Glutaminase/Asparaginase C-terminal domain C628_RS10415 PF00710 Asparaginase, N-terminal C628_RS10425 PF11798 IMS family HHH motif C628_RS10425 PF00817 impB/mucB/samB family C628_RS10425 PF11799 impB/mucB/samB family C-terminal domain C628_RS10435 PF00376 MerR family regulatory protein C628_RS10435 PF09278 MerR, DNA binding C628_RS10445 PF00133 tRNA synthetases class I (I, L, M and V) C628_RS10445 PF08264 Anticodon-binding domain of tRNA C628_RS10455 PF05103 DivIVA protein C628_RS10465 PF04472 Cell division protein SepF C628_RS10470 PF01168 Alanine racemase, N-terminal domain C628_RS10475 PF02578 Multi-copper polyphenol oxidoreductase laccase C628_RS10480 PF00091 Tubulin/FtsZ family, GTPase domain C628_RS10480 PF12327 FtsZ family, C-terminal domain C628_RS10485 PF08478 POTRA domain, FtsQ-type C628_RS10490 PF01225 Mur ligase family, catalytic domain C628_RS10490 PF02875 Mur ligase family, glutamate ligase domain C628_RS10490 PF08245 Mur ligase middle domain C628_RS10495 PF04101 Glycosyltransferase family 28 C-terminal domain C628_RS10495 PF03033 Glycosyltransferase family 28 N-terminal domain C628_RS10500 PF01098 Cell cycle protein C628_RS10505 PF08245 Mur ligase middle domain C628_RS10510 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 C628_RS10510 PF00953 Glycosyl transferase family 4 C628_RS10515 PF02875 Mur ligase family, glutamate ligase domain C628_RS10515 PF01225 Mur ligase family, catalytic domain C628_RS10515 PF08245 Mur ligase middle domain C628_RS10520 PF01225 Mur ligase family, catalytic domain C628_RS10520 PF08245 Mur ligase middle domain C628_RS10520 PF02875 Mur ligase family, glutamate ligase domain C628_RS10525 PF00905 Penicillin binding protein transpeptidase domain C628_RS10525 PF03717 Penicillin-binding Protein dimerisation domain C628_RS10535 PF01795 MraW methylase family C628_RS10540 PF02381 MraZ protein, putative antitoxin-like C628_RS10555 PF00583 Acetyltransferase (GNAT) family C628_RS10560 PF02219 Methylenetetrahydrofolate reductase C628_RS10565 PF00348 Polyprenyl synthetase C628_RS10575 PF18367 Rv2175c C-terminal domain of unknown function C628_RS10580 PF00069 Protein kinase domain C628_RS10580 PF03793 PASTA domain C628_RS10585 PF09594 Glycosyltransferase family 87 C628_RS10590 PF09594 Glycosyltransferase family 87 C628_RS10595 PF01474 Class-II DAHP synthetase family C628_RS10600 PF16473 3' exoribonuclease, RNase T-like C628_RS10605 PF09594 Glycosyltransferase family 87 C628_RS10610 PF00756 Putative esterase C628_RS10610 PF08310 LGFP repeat C628_RS10630 PF00480 ROK family C628_RS10635 PF13439 Glycosyltransferase Family 4 C628_RS10635 PF00534 Glycosyl transferases group 1 C628_RS10640 PF00877 NlpC/P60 family C628_RS10645 PF00877 NlpC/P60 family C628_RS10650 PF13631 Cytochrome b(N-terminal)/b6/petB C628_RS10655 PF00355 Rieske [2Fe-2S] domain C628_RS10660 PF00034 Cytochrome c C628_RS10660 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C628_RS10665 PF00510 Cytochrome c oxidase subunit III C628_RS10675 PF12270 Cytochrome c oxidase subunit IV C628_RS10680 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C628_RS10685 PF13537 Glutamine amidotransferase domain C628_RS10685 PF00733 Asparagine synthase C628_RS10690 PF01521 Iron-sulphur cluster biosynthesis C628_RS10695 PF11241 Protein of unknown function (DUF3043) C628_RS10700 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase C628_RS10705 PF02277 Phosphoribosyltransferase C628_RS10710 PF02654 Cobalamin-5-phosphate synthase C628_RS10715 PF00106 short chain dehydrogenase C628_RS10720 PF01063 Amino-transferase class IV C628_RS10725 PF02789 Cytosol aminopeptidase family, N-terminal domain C628_RS10725 PF00883 Cytosol aminopeptidase family, catalytic domain C628_RS10735 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C628_RS10735 PF00364 Biotin-requiring enzyme C628_RS10735 PF02817 e3 binding domain C628_RS10740 PF03099 Biotin/lipoate A/B protein ligase family C628_RS10745 PF04055 Radical SAM superfamily C628_RS10750 PF13829 Domain of unknown function (DUF4191) C628_RS10765 PF00120 Glutamine synthetase, catalytic domain C628_RS10765 PF03951 Glutamine synthetase, beta-Grasp domain C628_RS10780 PF00293 NUDIX domain C628_RS10780 PF13344 Haloacid dehalogenase-like hydrolase C628_RS10785 PF00296 Luciferase-like monooxygenase C628_RS10795 PF14821 Threonine synthase N terminus C628_RS10795 PF00291 Pyridoxal-phosphate dependent enzyme C628_RS10820 PF01126 Heme oxygenase C628_RS10825 PF03710 Glutamate-ammonia ligase adenylyltransferase C628_RS10825 PF08335 GlnD PII-uridylyltransferase C628_RS10830 PF03951 Glutamine synthetase, beta-Grasp domain C628_RS10830 PF00120 Glutamine synthetase, catalytic domain C628_RS10840 PF01527 Transposase C628_RS10845 PF00665 Integrase core domain C628_RS10845 PF13333 Integrase core domain C628_RS10845 PF13276 HTH-like domain C628_RS10855 PF05235 CHAD domain C628_RS10855 PF01928 CYTH domain C628_RS10870 PF00575 S1 RNA binding domain C628_RS10870 PF00773 RNB domain C628_RS10885 PF13456 Reverse transcriptase-like C628_RS10885 PF00300 Histidine phosphatase superfamily (branch 1) C628_RS10895 PF01784 NIF3 (NGG1p interacting factor 3) C628_RS10900 PF13419 Haloacid dehalogenase-like hydrolase C628_RS10905 PF01451 Low molecular weight phosphotyrosine protein phosphatase C628_RS10910 PF02104 SURF1 family C628_RS10930 PF11253 Protein of unknown function (DUF3052) C628_RS10940 PF17831 Pyruvate dehydrogenase E1 component middle domain C628_RS10940 PF00456 Transketolase, thiamine diphosphate binding domain C628_RS10945 PF00005 ABC transporter C628_RS10970 PF00561 alpha/beta hydrolase fold C628_RS10975 PF00550 Phosphopantetheine attachment site C628_RS10980 PF13344 Haloacid dehalogenase-like hydrolase C628_RS11030 PF13936 Helix-turn-helix domain C628_RS11030 PF00665 Integrase core domain C628_RS11035 PF16655 PhoD-like phosphatase, N-terminal domain C628_RS11035 PF09423 PhoD-like phosphatase C628_RS11050 PF00723 Glycosyl hydrolases family 15 C628_RS11060 PF01807 CHC2 zinc finger C628_RS11060 PF10410 DnaB-helicase binding domain of primase C628_RS11060 PF08275 DNA primase catalytic core, N-terminal domain C628_RS11060 PF08278 DNA primase DnaG DnaB-binding C628_RS11060 PF13662 Toprim domain C628_RS11075 PF01380 SIS domain C628_RS11085 PF13276 HTH-like domain C628_RS11085 PF00665 Integrase core domain C628_RS11085 PF13333 Integrase core domain C628_RS11090 PF01527 Transposase C628_RS11100 PF13286 Phosphohydrolase-associated domain C628_RS11100 PF01966 HD domain C628_RS11125 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C628_RS11125 PF03129 Anticodon binding domain C628_RS11130 PF01022 Bacterial regulatory protein, arsR family C628_RS11135 PF01475 Ferric uptake regulator family C628_RS11150 PF01255 Putative undecaprenyl diphosphate synthase C628_RS11155 PF11967 Recombination protein O N terminal C628_RS11155 PF02565 Recombination protein O C terminal C628_RS11160 PF01926 50S ribosome-binding GTPase C628_RS11160 PF07650 KH domain C628_RS11165 PF03471 Transporter associated domain C628_RS11165 PF00571 CBS domain C628_RS11165 PF01595 Cyclin M transmembrane N-terminal domain C628_RS11170 PF02130 Uncharacterized protein family UPF0054 C628_RS11175 PF02562 PhoH-like protein C628_RS11180 PF04452 RNA methyltransferase C628_RS11185 PF01556 DnaJ C terminal domain C628_RS11185 PF00684 DnaJ central domain C628_RS11185 PF00226 DnaJ domain C628_RS11190 PF01628 HrcA protein C terminal domain C628_RS11195 PF04055 Radical SAM superfamily C628_RS11215 PF00501 AMP-binding enzyme C628_RS11220 PF02446 4-alpha-glucanotransferase C628_RS11225 PF00005 ABC transporter C628_RS11225 PF00664 ABC transporter transmembrane region C628_RS11235 PF01432 Peptidase family M3 C628_RS11240 PF00135 Carboxylesterase family C628_RS11245 PF16657 Maltogenic Amylase, C-terminal domain C628_RS11245 PF00128 Alpha amylase, catalytic domain C628_RS11250 PF18085 Maltokinase N-terminal cap domain C628_RS11255 PF00293 NUDIX domain C628_RS11275 PF00155 Aminotransferase class I and II C628_RS11280 PF05525 Branched-chain amino acid transport protein C628_RS11285 PF00296 Luciferase-like monooxygenase C628_RS11295 PF02028 BCCT, betaine/carnitine/choline family transporter C628_RS11310 PF02913 FAD linked oxidases, C-terminal domain C628_RS11310 PF01565 FAD binding domain C628_RS11310 PF13183 4Fe-4S dicluster domain C628_RS11315 PF07729 FCD domain C628_RS11315 PF00392 Bacterial regulatory proteins, gntR family C628_RS11335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C628_RS11340 PF00528 Binding-protein-dependent transport system inner membrane component C628_RS11345 PF12911 N-terminal TM domain of oligopeptide transport permease C C628_RS11345 PF00528 Binding-protein-dependent transport system inner membrane component C628_RS11350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C628_RS11350 PF00005 ABC transporter C628_RS11355 PF02834 LigT like Phosphoesterase C628_RS11360 PF00294 pfkB family carbohydrate kinase C628_RS11370 PF01758 Sodium Bile acid symporter family C628_RS11375 PF01263 Aldose 1-epimerase C628_RS11380 PF01274 Malate synthase C628_RS11385 PF00463 Isocitrate lyase family C628_RS11400 PF02028 BCCT, betaine/carnitine/choline family transporter C628_RS11425 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component C628_RS11430 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component C628_RS11430 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component C628_RS11435 PF03480 Bacterial extracellular solute-binding protein, family 7 C628_RS11440 PF00009 Elongation factor Tu GTP binding domain C628_RS11440 PF00679 Elongation factor G C-terminus C628_RS11440 PF06421 GTP-binding protein LepA C-terminus C628_RS11450 PF01649 Ribosomal protein S20 C628_RS11455 PF01810 LysE type translocator C628_RS11480 PF02645 Uncharacterised protein, DegV family COG1307 C628_RS11485 PF00300 Histidine phosphatase superfamily (branch 1) C628_RS11495 PF01467 Cytidylyltransferase-like C628_RS11505 PF00171 Aldehyde dehydrogenase family C628_RS11510 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C628_RS11515 PF01472 PUA domain C628_RS11515 PF00696 Amino acid kinase family C628_RS11520 PF01926 50S ribosome-binding GTPase C628_RS11520 PF01018 GTP1/OBG C628_RS11520 PF09269 Domain of unknown function (DUF1967) C628_RS11525 PF00860 Permease family C628_RS11530 PF00248 Aldo/keto reductase family C628_RS11545 PF01016 Ribosomal L27 protein C628_RS11550 PF00829 Ribosomal prokaryotic L21 protein C628_RS11555 PF10150 Ribonuclease E/G family C628_RS11565 PF02678 Pirin C628_RS11565 PF05726 Pirin C-terminal cupin domain C628_RS11575 PF00334 Nucleoside diphosphate kinase C628_RS11600 PF02875 Mur ligase family, glutamate ligase domain C628_RS11600 PF08245 Mur ligase middle domain C628_RS11605 PF10458 Valyl tRNA synthetase tRNA binding arm C628_RS11605 PF00133 tRNA synthetases class I (I, L, M and V) C628_RS11605 PF08264 Anticodon-binding domain of tRNA C628_RS11610 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C628_RS11615 PF00012 Hsp70 protein C628_RS11620 PF03641 Possible lysine decarboxylase C628_RS11625 PF00056 lactate/malate dehydrogenase, NAD binding domain C628_RS11625 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C628_RS11640 PF00355 Rieske [2Fe-2S] domain C628_RS11645 PF00970 Oxidoreductase FAD-binding domain C628_RS11645 PF00111 2Fe-2S iron-sulfur cluster binding domain C628_RS11645 PF00175 Oxidoreductase NAD-binding domain C628_RS11660 PF06689 ClpX C4-type zinc finger C628_RS11660 PF10431 C-terminal, D2-small domain, of ClpB protein C628_RS11660 PF07724 AAA domain (Cdc48 subfamily) C628_RS11670 PF01144 Coenzyme A transferase C628_RS11675 PF01144 Coenzyme A transferase C628_RS11680 PF09339 IclR helix-turn-helix domain C628_RS11680 PF01614 Bacterial transcriptional regulator C628_RS11685 PF00108 Thiolase, N-terminal domain C628_RS11685 PF02803 Thiolase, C-terminal domain C628_RS11695 PF00196 Bacterial regulatory proteins, luxR family C628_RS11705 PF10397 Adenylosuccinate lyase C-terminus C628_RS11705 PF00206 Lyase C628_RS11710 PF00775 Dioxygenase C628_RS11715 PF00775 Dioxygenase C628_RS11715 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal C628_RS11725 PF02426 Muconolactone delta-isomerase C628_RS11730 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C628_RS11730 PF13378 Enolase C-terminal domain-like C628_RS11735 PF04444 Catechol dioxygenase N terminus C628_RS11735 PF00775 Dioxygenase C628_RS11740 PF00848 Ring hydroxylating alpha subunit (catalytic domain) C628_RS11740 PF00355 Rieske [2Fe-2S] domain C628_RS11745 PF00866 Ring hydroxylating beta subunit C628_RS11750 PF00970 Oxidoreductase FAD-binding domain C628_RS11750 PF00175 Oxidoreductase NAD-binding domain C628_RS11750 PF00111 2Fe-2S iron-sulfur cluster binding domain C628_RS11755 PF00106 short chain dehydrogenase C628_RS11760 PF00196 Bacterial regulatory proteins, luxR family C628_RS11765 PF07690 Major Facilitator Superfamily C628_RS11775 PF00574 Clp protease C628_RS11780 PF00574 Clp protease C628_RS11785 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C628_RS11785 PF05698 Bacterial trigger factor protein (TF) C-terminus C628_RS11785 PF05697 Bacterial trigger factor protein (TF) C628_RS11835 PF02502 Ribose/Galactose Isomerase C628_RS11840 PF04235 Protein of unknown function (DUF418) C628_RS11840 PF07786 Protein of unknown function (DUF1624) C628_RS11845 PF01323 DSBA-like thioredoxin domain C628_RS11850 PF11838 ERAP1-like C-terminal domain C628_RS11850 PF01433 Peptidase family M1 domain C628_RS11875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C628_RS11875 PF00005 ABC transporter C628_RS11880 PF12911 N-terminal TM domain of oligopeptide transport permease C C628_RS11880 PF00528 Binding-protein-dependent transport system inner membrane component C628_RS11885 PF00528 Binding-protein-dependent transport system inner membrane component C628_RS11890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C628_RS11900 PF00202 Aminotransferase class-III C628_RS11910 PF09335 SNARE associated Golgi protein C628_RS11915 PF00106 short chain dehydrogenase C628_RS11925 PF01053 Cys/Met metabolism PLP-dependent enzyme C628_RS11930 PF00005 ABC transporter C628_RS11935 PF00924 Mechanosensitive ion channel C628_RS11940 PF01152 Bacterial-like globin C628_RS11960 PF00005 ABC transporter C628_RS11960 PF12848 ABC transporter C628_RS11990 PF13397 RNA polymerase-binding protein C628_RS12000 PF00528 Binding-protein-dependent transport system inner membrane component C628_RS12005 PF00528 Binding-protein-dependent transport system inner membrane component C628_RS12020 PF17912 MalK OB fold domain C628_RS12020 PF00005 ABC transporter C628_RS12025 PF00535 Glycosyl transferase family 2 C628_RS12045 PF00171 Aldehyde dehydrogenase family C628_RS12050 PF00171 Aldehyde dehydrogenase family C628_RS12055 PF00107 Zinc-binding dehydrogenase C628_RS12055 PF08240 Alcohol dehydrogenase GroES-like domain C628_RS12070 PF00857 Isochorismatase family C628_RS12075 PF00296 Luciferase-like monooxygenase C628_RS12080 PF02540 NAD synthase C628_RS12085 PF00731 AIR carboxylase C628_RS12095 PF01261 Xylose isomerase-like TIM barrel C628_RS12100 PF00106 short chain dehydrogenase C628_RS12105 PF00929 Exonuclease C628_RS12115 PF17964 Bacterial Ig domain C628_RS12115 PF03734 L,D-transpeptidase catalytic domain C628_RS12155 PF04960 Glutaminase C628_RS12165 PF00356 Bacterial regulatory proteins, lacI family C628_RS12170 PF02614 Glucuronate isomerase C628_RS12175 PF01202 Shikimate kinase C628_RS12185 PF00857 Isochorismatase family C628_RS12195 PF00578 AhpC/TSA family C628_RS12205 PF01648 4'-phosphopantetheinyl transferase superfamily C628_RS12210 PF07690 Major Facilitator Superfamily C628_RS12225 PF02801 Beta-ketoacyl synthase, C-terminal domain C628_RS12225 PF00109 Beta-ketoacyl synthase, N-terminal domain C628_RS12240 PF05651 Putative sugar diacid recognition C628_RS12240 PF17853 GGDEF-like domain C628_RS12240 PF13556 PucR C-terminal helix-turn-helix domain C628_RS12250 PF12728 Helix-turn-helix domain C628_RS12295 PF12823 Domain of unknown function (DUF3817) C628_RS12300 PF01725 Ham1 family C628_RS12305 PF01138 3' exoribonuclease family, domain 1 C628_RS12305 PF03725 3' exoribonuclease family, domain 2 C628_RS12325 PF02796 Helix-turn-helix domain of resolvase C628_RS12325 PF00239 Resolvase, N terminal domain C628_RS12330 PF13610 DDE domain C628_RS12340 PF01551 Peptidase family M23 C628_RS12360 PF02104 SURF1 family C628_RS12380 PF01022 Bacterial regulatory protein, arsR family C628_RS12395 PF01551 Peptidase family M23 C628_RS12400 PF01022 Bacterial regulatory protein, arsR family C628_RS12425 PF01545 Cation efflux family C628_RS12425 PF16916 Dimerisation domain of Zinc Transporter C628_RS12445 PF00376 MerR family regulatory protein C628_RS12445 PF09278 MerR, DNA binding C628_RS12460 PF10011 Predicted membrane protein (DUF2254) C628_RS12470 PF12706 Beta-lactamase superfamily domain C628_RS12475 PF01177 Asp/Glu/Hydantoin racemase C628_RS12485 PF01047 MarR family C628_RS12490 PF01694 Rhomboid family C628_RS12495 PF03576 Peptidase family S58 C628_RS12505 PF02617 ATP-dependent Clp protease adaptor protein ClpS C628_RS12515 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain C628_RS12515 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain C628_RS12520 PF13307 Helicase C-terminal domain C628_RS12540 PF00115 Cytochrome C and Quinol oxidase polypeptide I C628_RS12560 PF00268 Ribonucleotide reductase, small chain C628_RS12565 PF00210 Ferritin-like domain C628_RS12570 PF00392 Bacterial regulatory proteins, gntR family C628_RS12570 PF07729 FCD domain C628_RS12585 PF08343 Ribonucleotide reductase N-terminal C628_RS12585 PF00317 Ribonucleotide reductase, all-alpha domain C628_RS12585 PF02867 Ribonucleotide reductase, barrel domain C628_RS12590 PF07972 NrdI Flavodoxin like C628_RS12595 PF00462 Glutaredoxin C628_RS12600 PF00444 Ribosomal protein L36 C628_RS12605 PF02540 NAD synthase C628_RS12620 PF08240 Alcohol dehydrogenase GroES-like domain C628_RS12620 PF00107 Zinc-binding dehydrogenase C628_RS12625 PF03972 MmgE/PrpD family C628_RS12650 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C628_RS12655 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C628_RS12660 PF07286 Protein of unknown function (DUF1445) C628_RS12670 PF00375 Sodium:dicarboxylate symporter family C628_RS12680 PF00005 ABC transporter C628_RS12740 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C628_RS12745 PF01923 Cobalamin adenosyltransferase C628_RS12750 PF13185 GAF domain C628_RS12750 PF00196 Bacterial regulatory proteins, luxR family C628_RS12760 PF00291 Pyridoxal-phosphate dependent enzyme C628_RS12765 PF06426 Serine acetyltransferase, N-terminal C628_RS12765 PF00132 Bacterial transferase hexapeptide (six repeats) C628_RS12785 PF00549 CoA-ligase C628_RS12785 PF02629 CoA binding domain C628_RS12790 PF08442 ATP-grasp domain C628_RS12790 PF00549 CoA-ligase C628_RS12805 PF01323 DSBA-like thioredoxin domain C628_RS12820 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain C628_RS12820 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain C628_RS12825 PF01207 Dihydrouridine synthase (Dus) C628_RS12830 PF01895 PhoU domain C628_RS12835 PF00005 ABC transporter C628_RS12840 PF00528 Binding-protein-dependent transport system inner membrane component C628_RS12845 PF00528 Binding-protein-dependent transport system inner membrane component C628_RS12850 PF12849 PBP superfamily domain C628_RS12855 PF13508 Acetyltransferase (GNAT) domain C628_RS12855 PF00583 Acetyltransferase (GNAT) family C628_RS12865 PF00781 Diacylglycerol kinase catalytic domain C628_RS12870 PF08768 Domain of unknown function (DUF1794) C628_RS12895 PF00665 Integrase core domain C628_RS12895 PF13276 HTH-like domain C628_RS12895 PF13333 Integrase core domain C628_RS12900 PF00586 AIR synthase related protein, N-terminal domain C628_RS12900 PF02769 AIR synthase related protein, C-terminal domain C628_RS12905 PF00156 Phosphoribosyl transferase domain C628_RS12920 PF03006 Haemolysin-III related C628_RS12925 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain C628_RS12925 PF02769 AIR synthase related protein, C-terminal domain C628_RS12925 PF00586 AIR synthase related protein, N-terminal domain C628_RS12935 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase C628_RS12940 PF00255 Glutathione peroxidase C628_RS12955 PF00375 Sodium:dicarboxylate symporter family C628_RS12960 PF00326 Prolyl oligopeptidase family C628_RS12960 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain C628_RS12965 PF01259 SAICAR synthetase C628_RS12970 PF00206 Lyase C628_RS12970 PF10397 Adenylosuccinate lyase C-terminus C628_RS12975 PF00155 Aminotransferase class I and II C628_RS12980 PF02843 Phosphoribosylglycinamide synthetase, C domain C628_RS12980 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain C628_RS12980 PF02844 Phosphoribosylglycinamide synthetase, N domain C628_RS12985 PF01230 HIT domain C628_RS12990 PF12697 Alpha/beta hydrolase family C628_RS12990 PF08241 Methyltransferase domain C628_RS12995 PF00854 POT family C628_RS13010 PF00672 HAMP domain C628_RS13010 PF00512 His Kinase A (phospho-acceptor) domain C628_RS13010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C628_RS13015 PF00486 Transcriptional regulatory protein, C terminal C628_RS13015 PF00072 Response regulator receiver domain C628_RS13020 PF13411 MerR HTH family regulatory protein C628_RS13025 PF01168 Alanine racemase, N-terminal domain C628_RS13025 PF14031 Putative serine dehydratase domain C628_RS13030 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C628_RS13030 PF00205 Thiamine pyrophosphate enzyme, central domain C628_RS13030 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C628_RS13035 PF07690 Major Facilitator Superfamily C628_RS13040 PF00440 Bacterial regulatory proteins, tetR family C628_RS13040 PF08362 YcdC-like protein, C-terminal region C628_RS13055 PF00890 FAD binding domain C628_RS13060 PF00890 FAD binding domain C628_RS13065 PF00107 Zinc-binding dehydrogenase C628_RS13065 PF08240 Alcohol dehydrogenase GroES-like domain C628_RS13075 PF07690 Major Facilitator Superfamily C628_RS13075 PF00083 Sugar (and other) transporter C628_RS13080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C628_RS13080 PF03466 LysR substrate binding domain C628_RS13085 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain C628_RS13125 PF00982 Glycosyltransferase family 20 C628_RS13140 PF00356 Bacterial regulatory proteins, lacI family C628_RS13150 PF00005 ABC transporter C628_RS13155 PF00950 ABC 3 transport family C628_RS13175 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C628_RS13175 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C628_RS13180 PF07690 Major Facilitator Superfamily C628_RS13180 PF00083 Sugar (and other) transporter C628_RS13190 PF08032 RNA 2'-O ribose methyltransferase substrate binding C628_RS13190 PF00588 SpoU rRNA Methylase family C628_RS13195 PF01406 tRNA synthetases class I (C) catalytic domain C628_RS13195 PF09190 DALR domain C628_RS13200 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C628_RS13200 PF02378 Phosphotransferase system, EIIC C628_RS13200 PF00367 phosphotransferase system, EIIB C628_RS13205 PF08244 Glycosyl hydrolases family 32 C terminal C628_RS13205 PF00251 Glycosyl hydrolases family 32 N-terminal domain C628_RS13210 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase C628_RS13215 PF01979 Amidohydrolase family C628_RS13220 PF00701 Dihydrodipicolinate synthetase family C628_RS13225 PF00480 ROK family C628_RS13235 PF10011 Predicted membrane protein (DUF2254) C628_RS13245 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase C628_RS13265 PF00005 ABC transporter C628_RS13265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C628_RS13270 PF01810 LysE type translocator C628_RS13275 PF01037 Lrp/AsnC ligand binding domain C628_RS13285 PF02542 YgbB family C628_RS13290 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C628_RS13295 PF02559 CarD-like/TRCF domain C628_RS13300 PF00072 Response regulator receiver domain C628_RS13300 PF00486 Transcriptional regulatory protein, C terminal C628_RS13305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C628_RS13305 PF00512 His Kinase A (phospho-acceptor) domain C628_RS13305 PF00672 HAMP domain C628_RS13315 PF06745 KaiC C628_RS13315 PF18073 Rubredoxin metal binding domain C628_RS13320 PF02457 DisA bacterial checkpoint controller nucleotide-binding C628_RS13320 PF12826 Helix-hairpin-helix motif C628_RS13320 PF10635 DisA bacterial checkpoint controller linker region C628_RS13330 PF00171 Aldehyde dehydrogenase family C628_RS13335 PF00484 Carbonic anhydrase C628_RS13340 PF00730 HhH-GPD superfamily base excision DNA repair protein C628_RS13340 PF00633 Helix-hairpin-helix motif C628_RS13365 PF07724 AAA domain (Cdc48 subfamily) C628_RS13365 PF00004 ATPase family associated with various cellular activities (AAA) C628_RS13365 PF17871 AAA lid domain C628_RS13365 PF10431 C-terminal, D2-small domain, of ClpB protein C628_RS13365 PF02861 Clp amino terminal domain, pathogenicity island component C628_RS13370 PF00478 IMP dehydrogenase / GMP reductase domain C628_RS13370 PF00571 CBS domain C628_RS13380 PF12833 Helix-turn-helix domain C628_RS13380 PF14525 AraC-binding-like domain C628_RS13385 PF01494 FAD binding domain C628_RS13385 PF07976 Phenol hydroxylase, C-terminal dimerisation domain C628_RS13400 PF07690 Major Facilitator Superfamily C628_RS13410 PF00152 tRNA synthetases class II (D, K and N) C628_RS13410 PF01336 OB-fold nucleic acid binding domain C628_RS13415 PF02569 Pantoate-beta-alanine ligase C628_RS13435 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C628_RS13440 PF02152 Dihydroneopterin aldolase C628_RS13445 PF00809 Pterin binding enzyme C628_RS13450 PF01227 GTP cyclohydrolase I C628_RS13455 PF01434 Peptidase family M41 C628_RS13455 PF17862 AAA+ lid domain C628_RS13455 PF00004 ATPase family associated with various cellular activities (AAA) C628_RS13460 PF00156 Phosphoribosyl transferase domain C628_RS13465 PF01171 PP-loop family C628_RS13475 PF00719 Inorganic pyrophosphatase C628_RS13485 PF03994 Domain of Unknown Function (DUF350) C628_RS13500 PF13785 Domain of unknown function (DUF4178) C628_RS13505 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C628_RS13505 PF02378 Phosphotransferase system, EIIC C628_RS13505 PF00367 phosphotransferase system, EIIB C628_RS13510 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C628_RS13510 PF02378 Phosphotransferase system, EIIC C628_RS13510 PF00367 phosphotransferase system, EIIB C628_RS13515 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C628_RS13515 PF00367 phosphotransferase system, EIIB C628_RS13515 PF02378 Phosphotransferase system, EIIC C628_RS13520 PF14759 Reductase C-terminal C628_RS13520 PF07992 Pyridine nucleotide-disulphide oxidoreductase C628_RS13525 PF00581 Rhodanese-like domain C628_RS13535 PF00668 Condensation domain C628_RS13535 PF13193 AMP-binding enzyme C-terminal domain C628_RS13535 PF00550 Phosphopantetheine attachment site C628_RS13535 PF07993 Male sterility protein C628_RS13535 PF00501 AMP-binding enzyme C628_RS13540 PF00171 Aldehyde dehydrogenase family C628_RS13545 PF03976 Polyphosphate kinase 2 (PPK2) C628_RS13555 PF00118 TCP-1/cpn60 chaperonin family C628_RS13605 PF01546 Peptidase family M20/M25/M40 C628_RS13605 PF07687 Peptidase dimerisation domain C628_RS13615 PF13244 Domain of unknown function (DUF4040) C628_RS13615 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C628_RS13615 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter C628_RS13615 PF00361 Proton-conducting membrane transporter C628_RS13620 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C628_RS13625 PF00361 Proton-conducting membrane transporter C628_RS13635 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) C628_RS13640 PF03334 Na+/H+ antiporter subunit C628_RS13650 PF04107 Glutamate-cysteine ligase family 2(GCS2) C628_RS13665 PF01327 Polypeptide deformylase C628_RS13680 PF13396 Phospholipase_D-nuclease N-terminal C628_RS13680 PF13091 PLD-like domain C628_RS13685 PF07690 Major Facilitator Superfamily C628_RS13695 PF02567 Phenazine biosynthesis-like protein C628_RS13705 PF00005 ABC transporter C628_RS13710 PF00293 NUDIX domain C628_RS13725 PF00665 Integrase core domain C628_RS13725 PF13333 Integrase core domain C628_RS13725 PF13276 HTH-like domain C628_RS13730 PF01527 Transposase C628_RS13735 PF00497 Bacterial extracellular solute-binding proteins, family 3 C628_RS13745 PF00665 Integrase core domain C628_RS13745 PF13936 Helix-turn-helix domain C628_RS13750 PF00871 Acetokinase family C628_RS13755 PF01515 Phosphate acetyl/butaryl transferase C628_RS13760 PF07992 Pyridine nucleotide-disulphide oxidoreductase C628_RS13765 PF13673 Acetyltransferase (GNAT) domain C628_RS13785 PF02222 ATP-grasp domain C628_RS13785 PF01370 NAD dependent epimerase/dehydratase family C628_RS13790 PF00709 Adenylosuccinate synthetase C628_RS13800 PF00430 ATP synthase B/B' CF(0) C628_RS13810 PF01116 Fructose-bisphosphate aldolase class-II C628_RS13830 PF00156 Phosphoribosyl transferase domain C628_RS13840 PF00581 Rhodanese-like domain C628_RS13865 PF10431 C-terminal, D2-small domain, of ClpB protein C628_RS13865 PF00004 ATPase family associated with various cellular activities (AAA) C628_RS13865 PF07724 AAA domain (Cdc48 subfamily) C628_RS13865 PF17871 AAA lid domain C628_RS13865 PF02861 Clp amino terminal domain, pathogenicity island component C628_RS13875 PF01022 Bacterial regulatory protein, arsR family C628_RS13880 PF01545 Cation efflux family C628_RS13880 PF16916 Dimerisation domain of Zinc Transporter C628_RS13885 PF07992 Pyridine nucleotide-disulphide oxidoreductase C628_RS13895 PF01053 Cys/Met metabolism PLP-dependent enzyme C628_RS13925 PF00795 Carbon-nitrogen hydrolase C628_RS13935 PF00171 Aldehyde dehydrogenase family C628_RS13940 PF13411 MerR HTH family regulatory protein C628_RS13945 PF01556 DnaJ C terminal domain C628_RS13945 PF00226 DnaJ domain C628_RS13945 PF00684 DnaJ central domain C628_RS13950 PF01025 GrpE C628_RS13955 PF00012 Hsp70 protein C628_RS13960 PF01594 AI-2E family transporter C628_RS13990 PF08240 Alcohol dehydrogenase GroES-like domain C628_RS13990 PF00107 Zinc-binding dehydrogenase C628_RS14010 PF01925 Sulfite exporter TauE/SafE C628_RS14020 PF00009 Elongation factor Tu GTP binding domain C628_RS14025 PF01507 Phosphoadenosine phosphosulfate reductase family C628_RS14030 PF01507 Phosphoadenosine phosphosulfate reductase family C628_RS14035 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C628_RS14035 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C628_RS14040 PF07992 Pyridine nucleotide-disulphide oxidoreductase C628_RS14080 PF16745 RsgA N-terminal domain C628_RS14080 PF03193 RsgA GTPase C628_RS14090 PF07687 Peptidase dimerisation domain C628_RS14090 PF01546 Peptidase family M20/M25/M40 C628_RS14100 PF13333 Integrase core domain C628_RS14100 PF13276 HTH-like domain C628_RS14100 PF00665 Integrase core domain C628_RS14105 PF01527 Transposase C628_RS14110 PF00005 ABC transporter C628_RS14165 PF01156 Inosine-uridine preferring nucleoside hydrolase C628_RS14180 PF03352 Methyladenine glycosylase C628_RS14185 PF00042 Globin C628_RS14185 PF00970 Oxidoreductase FAD-binding domain C628_RS14185 PF00175 Oxidoreductase NAD-binding domain C628_RS14195 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C628_RS14195 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C628_RS14200 PF03123 CAT RNA binding domain C628_RS14200 PF00874 PRD domain C628_RS14210 PF00232 Glycosyl hydrolase family 1 C628_RS14220 PF00155 Aminotransferase class I and II C628_RS14230 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C628_RS14230 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C628_RS14230 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C628_RS14235 PF00692 dUTPase C628_RS14255 PF00933 Glycosyl hydrolase family 3 N terminal domain C628_RS14270 PF11847 Alpha-(1->3)-arabinofuranosyltransferase C628_RS14280 PF01757 Acyltransferase family C628_RS14295 PF13439 Glycosyltransferase Family 4 C628_RS14295 PF00534 Glycosyl transferases group 1 C628_RS14305 PF08241 Methyltransferase domain C628_RS14310 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain C628_RS14310 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain C628_RS14320 PF02390 Putative methyltransferase C628_RS14330 PF03176 MMPL family C628_RS14345 PF01039 Carboxyl transferase domain C628_RS14350 PF00109 Beta-ketoacyl synthase, N-terminal domain C628_RS14350 PF16197 Ketoacyl-synthetase C-terminal extension C628_RS14350 PF00975 Thioesterase domain C628_RS14350 PF00698 Acyl transferase domain C628_RS14350 PF02801 Beta-ketoacyl synthase, C-terminal domain C628_RS14350 PF00550 Phosphopantetheine attachment site C628_RS14355 PF00501 AMP-binding enzyme C628_RS14360 PF01083 Cutinase C628_RS14370 PF08310 LGFP repeat C628_RS14370 PF00756 Putative esterase C628_RS14390 PF01040 UbiA prenyltransferase family C628_RS14395 PF01569 PAP2 superfamily C628_RS14400 PF17994 Galactofuranosyltransferase 2 N-terminal C628_RS14410 PF01569 PAP2 superfamily C628_RS14420 PF00743 Flavin-binding monooxygenase-like C628_RS14425 PF03275 UDP-galactopyranose mutase C628_RS14435 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C628_RS14435 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C628_RS14445 PF01553 Acyltransferase C628_RS14450 PF02403 Seryl-tRNA synthetase N-terminal domain C628_RS14450 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C628_RS14455 PF00392 Bacterial regulatory proteins, gntR family C628_RS14455 PF07702 UTRA domain C628_RS14475 PF01842 ACT domain C628_RS14475 PF00800 Prephenate dehydratase C628_RS14495 PF03816 Cell envelope-related transcriptional attenuator domain C628_RS14520 PF03009 Glycerophosphoryl diester phosphodiesterase family C628_RS14525 PF02447 GntP family permease C628_RS14530 PF02887 Pyruvate kinase, alpha/beta domain C628_RS14530 PF00224 Pyruvate kinase, barrel domain C628_RS14535 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C628_RS14535 PF00056 lactate/malate dehydrogenase, NAD binding domain C628_RS14555 PF00392 Bacterial regulatory proteins, gntR family C628_RS14555 PF07702 UTRA domain C628_RS14560 PF00149 Calcineurin-like phosphoesterase C628_RS14570 PF07690 Major Facilitator Superfamily C628_RS14570 PF00083 Sugar (and other) transporter C628_RS14575 PF01070 FMN-dependent dehydrogenase C628_RS14580 PF08000 Bacterial PH domain C628_RS14585 PF01235 Sodium:alanine symporter family C628_RS14590 PF07729 FCD domain C628_RS14590 PF00392 Bacterial regulatory proteins, gntR family C628_RS14595 PF08669 Glycine cleavage T-protein C-terminal barrel domain C628_RS14595 PF01571 Aminomethyltransferase folate-binding domain C628_RS14595 PF01266 FAD dependent oxidoreductase C628_RS14595 PF16350 FAD dependent oxidoreductase central domain C628_RS14600 PF07063 Domain of unknown function (DUF1338) C628_RS14605 PF00171 Aldehyde dehydrogenase family C628_RS14610 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C628_RS14610 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C628_RS14625 PF01546 Peptidase family M20/M25/M40 C628_RS14625 PF07687 Peptidase dimerisation domain C628_RS14630 PF01625 Peptide methionine sulfoxide reductase C628_RS14635 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C628_RS14635 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C628_RS14645 PF07690 Major Facilitator Superfamily C628_RS14675 PF00196 Bacterial regulatory proteins, luxR family C628_RS14675 PF00072 Response regulator receiver domain C628_RS14695 PF04203 Sortase domain C628_RS14700 PF02096 60Kd inner membrane protein C628_RS14715 PF00582 Universal stress protein family C628_RS14720 PF00296 Luciferase-like monooxygenase C628_RS14730 PF00849 RNA pseudouridylate synthase C628_RS14730 PF01479 S4 domain C628_RS14765 PF04012 PspA/IM30 family C628_RS14790 PF13610 DDE domain C628_RS14795 PF00107 Zinc-binding dehydrogenase C628_RS14795 PF08240 Alcohol dehydrogenase GroES-like domain C628_RS14800 PF07883 Cupin domain C628_RS14805 PF00403 Heavy-metal-associated domain C628_RS14810 PF00403 Heavy-metal-associated domain C628_RS14850 PF02796 Helix-turn-helix domain of resolvase C628_RS14850 PF00239 Resolvase, N terminal domain C628_RS14855 PF00037 4Fe-4S binding domain C628_RS14885 PF00672 HAMP domain C628_RS14885 PF00512 His Kinase A (phospho-acceptor) domain C628_RS14885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C628_RS14890 PF00072 Response regulator receiver domain C628_RS14890 PF00486 Transcriptional regulatory protein, C terminal C628_RS14900 PF00394 Multicopper oxidase C628_RS14900 PF07732 Multicopper oxidase C628_RS14900 PF07731 Multicopper oxidase C628_RS14945 PF02796 Helix-turn-helix domain of resolvase C628_RS14945 PF00239 Resolvase, N terminal domain C628_RS14950 PF01022 Bacterial regulatory protein, arsR family C628_RS14960 PF07992 Pyridine nucleotide-disulphide oxidoreductase C628_RS14960 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C628_RS14965 PF13411 MerR HTH family regulatory protein C628_RS14975 PF13610 DDE domain C628_RS14990 PF13520 Amino acid permease C628_RS14995 PF07732 Multicopper oxidase C628_RS14995 PF07731 Multicopper oxidase C628_RS15015 PF00403 Heavy-metal-associated domain C628_RS15030 PF00403 Heavy-metal-associated domain C628_RS15040 PF00085 Thioredoxin C628_RS15050 PF07690 Major Facilitator Superfamily C628_RS15060 PF03551 Transcriptional regulator PadR-like family C628_RS15070 PF00772 DnaB-like helicase N terminal domain C628_RS15070 PF03796 DnaB-like helicase C terminal domain C628_RS15075 PF03948 Ribosomal protein L9, C-terminal domain C628_RS15075 PF01281 Ribosomal protein L9, N-terminal domain C628_RS15080 PF00436 Single-strand binding protein family C628_RS15085 PF01250 Ribosomal protein S6 C628_RS15100 PF00912 Transglycosylase C628_RS15100 PF00905 Penicillin binding protein transpeptidase domain C628_RS15110 PF01047 MarR family C628_RS15125 PF03992 Antibiotic biosynthesis monooxygenase C628_RS15130 PF17773 UPF0176 acylphosphatase like domain C628_RS15130 PF12368 Rhodanase C-terminal C628_RS15135 PF12704 MacB-like periplasmic core domain C628_RS15135 PF00005 ABC transporter C628_RS15135 PF02687 FtsX-like permease family C628_RS15140 PF00005 ABC transporter C628_RS15150 PF01658 Myo-inositol-1-phosphate synthase C628_RS15160 PF08903 Domain of unknown function (DUF1846) C628_RS15170 PF00665 Integrase core domain C628_RS15170 PF13276 HTH-like domain C628_RS15170 PF13333 Integrase core domain C628_RS15175 PF00665 Integrase core domain C628_RS15175 PF13936 Helix-turn-helix domain C628_RS15180 PF00210 Ferritin-like domain C628_RS15185 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain C628_RS15185 PF06827 Zinc finger found in FPG and IleRS C628_RS15185 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain C628_RS15190 PF01139 tRNA-splicing ligase RtcB C628_RS15195 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C628_RS15195 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C628_RS15200 PF08240 Alcohol dehydrogenase GroES-like domain C628_RS15200 PF00107 Zinc-binding dehydrogenase C628_RS15210 PF00665 Integrase core domain C628_RS15210 PF13276 HTH-like domain C628_RS15210 PF13333 Integrase core domain C628_RS15215 PF01527 Transposase C628_RS15225 PF07690 Major Facilitator Superfamily C628_RS15230 PF03949 Malic enzyme, NAD binding domain C628_RS15230 PF00390 Malic enzyme, N-terminal domain C628_RS15255 PF04892 VanZ like family C628_RS15260 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C628_RS15260 PF07992 Pyridine nucleotide-disulphide oxidoreductase C628_RS15265 PF01266 FAD dependent oxidoreductase C628_RS15280 PF00881 Nitroreductase family C628_RS15290 PF13603 Leucyl-tRNA synthetase, Domain 2 C628_RS15290 PF09334 tRNA synthetases class I (M) C628_RS15290 PF08264 Anticodon-binding domain of tRNA C628_RS15295 PF04304 Protein of unknown function (DUF454) C628_RS15300 PF01381 Helix-turn-helix C628_RS15310 PF01557 Fumarylacetoacetate (FAA) hydrolase family C628_RS15315 PF07883 Cupin domain C628_RS15325 PF07690 Major Facilitator Superfamily C628_RS15330 PF01494 FAD binding domain C628_RS15355 PF00425 chorismate binding enzyme C628_RS15355 PF04715 Anthranilate synthase component I, N terminal region C628_RS15360 PF00117 Glutamine amidotransferase class-I C628_RS15365 PF00591 Glycosyl transferase family, a/b domain C628_RS15365 PF02885 Glycosyl transferase family, helical bundle domain C628_RS15370 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase C628_RS15370 PF00218 Indole-3-glycerol phosphate synthase C628_RS15375 PF00291 Pyridoxal-phosphate dependent enzyme C628_RS15380 PF00290 Tryptophan synthase alpha chain C628_RS15390 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C628_RS15395 PF13732 Domain of unknown function (DUF4162) C628_RS15395 PF00005 ABC transporter C628_RS15410 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C628_RS15415 PF13593 SBF-like CPA transporter family (DUF4137) C628_RS15425 PF01022 Bacterial regulatory protein, arsR family C628_RS15430 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C628_RS15435 PF13460 NAD(P)H-binding C628_RS15455 PF00106 short chain dehydrogenase C628_RS15460 PF02416 mttA/Hcf106 family C628_RS15465 PF00854 POT family C628_RS15470 PF00440 Bacterial regulatory proteins, tetR family C628_RS15470 PF08361 MAATS-type transcriptional repressor, C-terminal region C628_RS15475 PF00775 Dioxygenase C628_RS15475 PF04444 Catechol dioxygenase N terminus C628_RS15480 PF00465 Iron-containing alcohol dehydrogenase C628_RS15485 PF00083 Sugar (and other) transporter C628_RS15490 PF01614 Bacterial transcriptional regulator C628_RS15490 PF09339 IclR helix-turn-helix domain C628_RS15495 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C628_RS15495 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C628_RS15505 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C628_RS15505 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C628_RS15510 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C628_RS15510 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C628_RS15520 PF00083 Sugar (and other) transporter C628_RS15545 PF01497 Periplasmic binding protein C628_RS15550 PF08659 KR domain C628_RS15550 PF00698 Acyl transferase domain C628_RS15550 PF16197 Ketoacyl-synthetase C-terminal extension C628_RS15550 PF02801 Beta-ketoacyl synthase, C-terminal domain C628_RS15550 PF00107 Zinc-binding dehydrogenase C628_RS15550 PF08240 Alcohol dehydrogenase GroES-like domain C628_RS15550 PF00109 Beta-ketoacyl synthase, N-terminal domain C628_RS15550 PF00550 Phosphopantetheine attachment site C628_RS15550 PF14765 Polyketide synthase dehydratase C628_RS15570 PF08543 Phosphomethylpyrimidine kinase C628_RS15580 PF00403 Heavy-metal-associated domain C628_RS15585 PF05437 Branched-chain amino acid transport protein (AzlD) C628_RS15590 PF03591 AzlC protein C628_RS15595 PF02622 Uncharacterized ACR, COG1678 C628_RS15600 PF01743 Poly A polymerase head domain C628_RS15600 PF13735 tRNA nucleotidyltransferase domain 2 putative C628_RS15600 PF12627 Probable RNA and SrmB- binding site of polymerase A C628_RS15605 PF00293 NUDIX domain C628_RS15615 PF03023 Lipid II flippase MurJ C628_RS15620 PF08281 Sigma-70, region 4 C628_RS15620 PF04542 Sigma-70 region 2 C628_RS15625 PF07992 Pyridine nucleotide-disulphide oxidoreductase C628_RS15630 PF00085 Thioredoxin C628_RS15635 PF01471 Putative peptidoglycan binding domain C628_RS15635 PF01520 N-acetylmuramoyl-L-alanine amidase C628_RS15645 PF17762 HTH domain found in ParB protein C628_RS15645 PF02195 ParB-like nuclease domain C628_RS15650 PF13614 AAA domain C628_RS15655 PF02527 rRNA small subunit methyltransferase G C628_RS15660 PF02096 60Kd inner membrane protein C628_RS15665 PF00825 Ribonuclease P C628_RS15670 PF00468 Ribosomal protein L34