C628_RS00005	SM00382	ATPases associated with a variety of cellular activities
C628_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
C628_RS00010	SM00480	DNA polymerase III beta subunit
C628_RS00025	SM00387	Histidine kinase-like ATPases
C628_RS00025	SM00433	TopoisomeraseII
C628_RS00065	SM00434	DNA Topoisomerase IV
C628_RS00135	SM00530	Helix-turn-helix XRE-family like proteins 
C628_RS00150	SM00829	Enoylreductase
C628_RS00250	SM00382	ATPases associated with a variety of cellular activities
C628_RS00265	SM00382	ATPases associated with a variety of cellular activities
C628_RS00285	SM00342	helix_turn_helix, arabinose operon control protein
C628_RS00305	SM00382	ATPases associated with a variety of cellular activities
C628_RS00325	SM00220	Serine/Threonine protein kinases, catalytic domain
C628_RS00325	SM00740	C628_RS00325
C628_RS00330	SM00220	Serine/Threonine protein kinases, catalytic domain
C628_RS00345	SM00331	Sigma factor PP2C-like phosphatases
C628_RS00345	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
C628_RS00350	SM00240	Forkhead associated domain
C628_RS00355	SM00240	Forkhead associated domain
C628_RS00410	SM00450	Rhodanese Homology Domain
C628_RS00410	SM00849	Metallo-beta-lactamase superfamily
C628_RS00420	SM00450	Rhodanese Homology Domain
C628_RS00425	SM00450	Rhodanese Homology Domain
C628_RS00485	SM00670	Large family of predicted nucleotide-binding domains
C628_RS00500	SM00387	Histidine kinase-like ATPases
C628_RS00505	SM00448	cheY-homologous receiver domain
C628_RS00520	SM00729	Elongator protein 3, MiaB family, Radical SAM
C628_RS00520	SM00876	Biotin and Thiamin Synthesis associated domain
C628_RS00595	SM00347	helix_turn_helix multiple antibiotic resistance protein
C628_RS00615	SM00988	UreE urease accessory protein, N-terminal domain
C628_RS00705	SM00420	helix_turn_helix, Deoxyribose operon repressor
C628_RS00705	SM01134	C628_RS00705
C628_RS00730	SM00420	helix_turn_helix, Deoxyribose operon repressor
C628_RS00730	SM01134	C628_RS00730
C628_RS00870	SM00487	DEAD-like helicases superfamily
C628_RS00870	SM00490	helicase superfamily c-terminal domain
C628_RS00870	SM00847	Helicase associated domain (HA2)  Add an annotation
C628_RS00875	SM01266	C628_RS00875
C628_RS00950	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C628_RS00950	SM00866	C628_RS00950
C628_RS01015	SM00354	helix_turn _helix lactose operon repressor
C628_RS01030	SM00357	Cold shock protein domain
C628_RS01050	SM00382	ATPases associated with a variety of cellular activities
C628_RS01060	SM00354	helix_turn _helix lactose operon repressor
C628_RS01075	SM00354	helix_turn _helix lactose operon repressor
C628_RS01090	SM00091	PAS domain
C628_RS01110	SM00421	helix_turn_helix, Lux Regulon
C628_RS01110	SM00448	cheY-homologous receiver domain
C628_RS01145	SM00822	C628_RS01145
C628_RS01150	SM00530	Helix-turn-helix XRE-family like proteins 
C628_RS01220	SM00382	ATPases associated with a variety of cellular activities
C628_RS01235	SM00829	Enoylreductase
C628_RS01270	SM00450	Rhodanese Homology Domain
C628_RS01280	SM00852	Probable molybdopterin binding domain
C628_RS01290	SM00852	Probable molybdopterin binding domain
C628_RS01310	SM00382	ATPases associated with a variety of cellular activities
C628_RS01335	SM00924	MgtE intracellular N domain
C628_RS01440	SM00382	ATPases associated with a variety of cellular activities
C628_RS01450	SM00278	Helix-hairpin-helix DNA-binding motif class 1
C628_RS01450	SM00493	C628_RS01450
C628_RS01495	SM00917	LeuA allosteric (dimerisation) domain
C628_RS01510	SM00859	Semialdehyde dehydrogenase, NAD binding domain
C628_RS01525	SM01060	C628_RS01525
C628_RS01535	SM00344	helix_turn_helix ASNC type
C628_RS01555	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C628_RS01565	SM00226	Low molecular weight phosphatase family
C628_RS01610	SM00448	cheY-homologous receiver domain
C628_RS01610	SM00862	Transcriptional regulatory protein, C terminal
C628_RS01690	SM00347	helix_turn_helix multiple antibiotic resistance protein
C628_RS01695	SM00822	C628_RS01695
C628_RS01715	SM00849	Metallo-beta-lactamase superfamily
C628_RS01720	SM00100	Cyclic nucleotide-monophosphate binding domain
C628_RS01720	SM00419	helix_turn_helix, cAMP Regulatory protein
C628_RS01730	SM00478	endonuclease III
C628_RS01730	SM00525	C628_RS01730
C628_RS01805	SM00487	DEAD-like helicases superfamily
C628_RS01805	SM00490	helicase superfamily c-terminal domain
C628_RS01810	SM00357	Cold shock protein domain
C628_RS01815	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
C628_RS01815	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
C628_RS01815	SM00493	C628_RS01815
C628_RS01825	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
C628_RS01825	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C628_RS01830	SM00382	ATPases associated with a variety of cellular activities
C628_RS01855	SM00363	S4 RNA-binding domain
C628_RS01865	SM00829	Enoylreductase
C628_RS01870	SM00849	Metallo-beta-lactamase superfamily
C628_RS01920	SM00829	Enoylreductase
C628_RS02005	SM00894	Excalibur calcium-binding domain
C628_RS02050	SM00060	Fibronectin type 3 domain
C628_RS02175	SM00382	ATPases associated with a variety of cellular activities
C628_RS02200	SM00984	UDP binding domain
C628_RS02315	SM00530	Helix-turn-helix XRE-family like proteins 
C628_RS02385	SM01133	C628_RS02385
C628_RS02425	SM00382	ATPases associated with a variety of cellular activities
C628_RS02475	SM00855	Phosphoglycerate mutase family
C628_RS02480	SM00387	Histidine kinase-like ATPases
C628_RS02480	SM00388	His Kinase A (phosphoacceptor) domain
C628_RS02485	SM00448	cheY-homologous receiver domain
C628_RS02485	SM00862	Transcriptional regulatory protein, C terminal
C628_RS02590	SM00382	ATPases associated with a variety of cellular activities
C628_RS02615	SM01004	Delta-aminolevulinic acid dehydratase
C628_RS02650	SM00855	Phosphoglycerate mutase family
C628_RS02685	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C628_RS02725	SM01130	C628_RS02725
C628_RS02810	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
C628_RS02880	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
C628_RS02885	SM00649	Ribosomal protein L11/L12
C628_RS02955	SM00663	RNA polymerase I subunit A N-terminus
C628_RS02965	SM00530	Helix-turn-helix XRE-family like proteins 
C628_RS02985	SM00838	Elongation factor G C-terminus
C628_RS02985	SM00889	Elongation factor G, domain IV
C628_RS03015	SM00382	ATPases associated with a variety of cellular activities
C628_RS03030	SM00342	helix_turn_helix, arabinose operon control protein
C628_RS03070	SM01403	C628_RS03070
C628_RS03090	SM01382	C628_RS03090
C628_RS03090	SM01383	C628_RS03090
C628_RS03105	SM00322	K homology RNA-binding domain
C628_RS03135	SM01374	C628_RS03135
C628_RS03140	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
C628_RS03190	SM00382	ATPases associated with a variety of cellular activities
C628_RS03275	SM00822	C628_RS03275
C628_RS03295	SM00346	helix_turn_helix isocitrate lyase regulation
C628_RS03320	SM00316	Ribosomal protein S1-like RNA-binding domain
C628_RS03335	SM00363	S4 RNA-binding domain
C628_RS03335	SM01390	C628_RS03335
C628_RS03340	SM00662	RNA polymerases D
C628_RS03395	SM00382	ATPases associated with a variety of cellular activities
C628_RS03450	SM01005	Alanine racemase, C-terminal domain
C628_RS03495	SM00883	Chaperonin 10 Kd subunit
C628_RS03525	SM00116	Domain in cystathionine beta-synthase and other proteins.
C628_RS03525	SM01240	C628_RS03525
C628_RS03530	SM01240	C628_RS03530
C628_RS03565	SM00421	helix_turn_helix, Lux Regulon
C628_RS03565	SM00448	cheY-homologous receiver domain
C628_RS03650	SM00347	helix_turn_helix multiple antibiotic resistance protein
C628_RS03695	SM00382	ATPases associated with a variety of cellular activities
C628_RS03705	SM00382	ATPases associated with a variety of cellular activities
C628_RS03705	SM00930	C628_RS03705
C628_RS03715	SM00481	DNA polymerase alpha chain like domain
C628_RS03730	SM00529	Helix-turn-helix diphteria tox regulatory element
C628_RS03730	SM00899	C628_RS03730
C628_RS03830	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C628_RS03830	SM00895	C628_RS03830
C628_RS03850	SM00382	ATPases associated with a variety of cellular activities
C628_RS03895	SM00382	ATPases associated with a variety of cellular activities
C628_RS03945	SM00530	Helix-turn-helix XRE-family like proteins 
C628_RS03965	SM00878	Biotin carboxylase C-terminal domain
C628_RS03980	SM00833	Cobalamin synthesis protein cobW C-terminal domain
C628_RS04010	SM00530	Helix-turn-helix XRE-family like proteins 
C628_RS04020	SM00878	Biotin carboxylase C-terminal domain
C628_RS04025	SM00450	Rhodanese Homology Domain
C628_RS04090	SM01001	AIR carboxylase
C628_RS04155	SM00382	ATPases associated with a variety of cellular activities
C628_RS04175	SM00487	DEAD-like helicases superfamily
C628_RS04175	SM00490	helicase superfamily c-terminal domain
C628_RS04195	SM00487	DEAD-like helicases superfamily
C628_RS04195	SM00490	helicase superfamily c-terminal domain
C628_RS04205	SM00487	DEAD-like helicases superfamily
C628_RS04205	SM00490	helicase superfamily c-terminal domain
C628_RS04265	SM00996	S-adenosyl-L-homocysteine hydrolase
C628_RS04265	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
C628_RS04275	SM00448	cheY-homologous receiver domain
C628_RS04275	SM00862	Transcriptional regulatory protein, C terminal
C628_RS04280	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C628_RS04280	SM00387	Histidine kinase-like ATPases
C628_RS04280	SM00388	His Kinase A (phosphoacceptor) domain
C628_RS04285	SM00909	Sporulation and spore germination
C628_RS04300	SM00957	SecA DEAD-like domain
C628_RS04300	SM00958	SecA preprotein cross-linking domain
C628_RS04360	SM00487	DEAD-like helicases superfamily
C628_RS04360	SM00490	helicase superfamily c-terminal domain
C628_RS04400	SM00341	Helicase and RNase D C-terminal
C628_RS04450	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C628_RS04545	SM00937	C628_RS04545
C628_RS04550	SM00382	ATPases associated with a variety of cellular activities
C628_RS04590	SM00756	C628_RS04590
C628_RS04610	SM00382	ATPases associated with a variety of cellular activities
C628_RS04645	SM00487	DEAD-like helicases superfamily
C628_RS04645	SM00490	helicase superfamily c-terminal domain
C628_RS04665	SM00357	Cold shock protein domain
C628_RS04745	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
C628_RS04800	SM00487	DEAD-like helicases superfamily
C628_RS04800	SM00490	helicase superfamily c-terminal domain
C628_RS04805	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
C628_RS04805	SM01232	C628_RS04805
C628_RS04830	SM00507	HNH nucleases
C628_RS04845	SM00830	Chorismate mutase type II
C628_RS04860	SM00382	ATPases associated with a variety of cellular activities
C628_RS04890	SM00798	AICARFT/IMPCHase bienzyme
C628_RS04890	SM00851	MGS-like domain
C628_RS04935	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C628_RS04950	SM00448	cheY-homologous receiver domain
C628_RS04950	SM00862	Transcriptional regulatory protein, C terminal
C628_RS04955	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C628_RS04955	SM00387	Histidine kinase-like ATPases
C628_RS04955	SM00388	His Kinase A (phosphoacceptor) domain
C628_RS04960	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C628_RS04965	SM00852	Probable molybdopterin binding domain
C628_RS04975	SM00858	C628_RS04975
C628_RS04990	SM00852	Probable molybdopterin binding domain
C628_RS05020	SM00642	Alpha-amylase domain
C628_RS05045	SM00487	DEAD-like helicases superfamily
C628_RS05045	SM00490	helicase superfamily c-terminal domain
C628_RS05100	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C628_RS05115	SM01208	C628_RS05115
C628_RS05120	SM00650	Ribosomal RNA adenine dimethylases
C628_RS05130	SM00382	ATPases associated with a variety of cellular activities
C628_RS05235	SM00382	ATPases associated with a variety of cellular activities
C628_RS05240	SM00382	ATPases associated with a variety of cellular activities
C628_RS05255	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
C628_RS05290	SM01400	C628_RS05290
C628_RS05310	SM00382	ATPases associated with a variety of cellular activities
C628_RS05325	SM00421	helix_turn_helix, Lux Regulon
C628_RS05325	SM00448	cheY-homologous receiver domain
C628_RS05340	SM00382	ATPases associated with a variety of cellular activities
C628_RS05355	SM00894	Excalibur calcium-binding domain
C628_RS05385	SM00487	DEAD-like helicases superfamily
C628_RS05385	SM00490	helicase superfamily c-terminal domain
C628_RS05385	SM00982	C628_RS05385
C628_RS05385	SM01058	CarD-like/TRCF domain
C628_RS05390	SM00382	ATPases associated with a variety of cellular activities
C628_RS05395	SM00382	ATPases associated with a variety of cellular activities
C628_RS05455	SM01192	C628_RS05455
C628_RS05455	SM01193	C628_RS05455
C628_RS05485	SM00342	helix_turn_helix, arabinose operon control protein
C628_RS05570	SM00797	Allophanate hydrolase subunit 2
C628_RS05575	SM00796	Allophanate hydrolase subunit 1
C628_RS05590	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C628_RS05590	SM00895	C628_RS05590
C628_RS05605	SM00903	Flavin reductase like domain
C628_RS05750	SM00382	ATPases associated with a variety of cellular activities
C628_RS05790	SM00347	helix_turn_helix multiple antibiotic resistance protein
C628_RS05825	SM00327	von Willebrand factor (vWF) type A domain
C628_RS05835	SM00855	Phosphoglycerate mutase family
C628_RS05850	SM00382	ATPases associated with a variety of cellular activities
C628_RS05865	SM00347	helix_turn_helix multiple antibiotic resistance protein
C628_RS05935	SM00382	ATPases associated with a variety of cellular activities
C628_RS05970	SM00382	ATPases associated with a variety of cellular activities
C628_RS06010	SM00020	Trypsin-like serine protease
C628_RS06070	SM00507	HNH nucleases
C628_RS06125	SM00640	Glycosyl hydrolases family 32
C628_RS06170	SM00924	MgtE intracellular N domain
C628_RS06190	SM00861	Transketolase, pyrimidine binding domain
C628_RS06195	SM00382	ATPases associated with a variety of cellular activities
C628_RS06275	SM00382	ATPases associated with a variety of cellular activities
C628_RS06280	SM00382	ATPases associated with a variety of cellular activities
C628_RS06310	SM00487	DEAD-like helicases superfamily
C628_RS06310	SM00490	helicase superfamily c-terminal domain
C628_RS06330	SM00487	DEAD-like helicases superfamily
C628_RS06330	SM00490	helicase superfamily c-terminal domain
C628_RS06350	SM00487	DEAD-like helicases superfamily
C628_RS06350	SM00490	helicase superfamily c-terminal domain
C628_RS06375	SM00882	Coenzyme A transferase
C628_RS06380	SM00882	Coenzyme A transferase
C628_RS06390	SM00867	YceI-like domain 
C628_RS06395	SM00347	helix_turn_helix multiple antibiotic resistance protein
C628_RS06410	SM00100	Cyclic nucleotide-monophosphate binding domain
C628_RS06410	SM00419	helix_turn_helix, cAMP Regulatory protein
C628_RS06425	SM00954	Region found in RelA / SpoT proteins
C628_RS06445	SM00836	DALR anticodon binding domain
C628_RS06445	SM01016	Arginyl tRNA synthetase N terminal dom
C628_RS06495	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C628_RS06535	SM00116	Domain in cystathionine beta-synthase and other proteins.
C628_RS06535	SM01091	Transporter associated domain
C628_RS06545	SM00852	Probable molybdopterin binding domain
C628_RS06550	SM00729	Elongator protein 3, MiaB family, Radical SAM
C628_RS06560	SM00382	ATPases associated with a variety of cellular activities
C628_RS06560	SM00959	Rho termination factor, N-terminal domain
C628_RS06565	SM00937	C628_RS06565
C628_RS06625	SM00382	ATPases associated with a variety of cellular activities
C628_RS06675	SM00382	ATPases associated with a variety of cellular activities
C628_RS06680	SM00062	Bacterial periplasmic substrate-binding proteins
C628_RS06685	SM00642	Alpha-amylase domain
C628_RS06690	SM00642	Alpha-amylase domain
C628_RS06695	SM00382	ATPases associated with a variety of cellular activities
C628_RS06715	SM00893	Electron transfer flavoprotein domain
C628_RS06720	SM00893	Electron transfer flavoprotein domain
C628_RS06740	SM00530	Helix-turn-helix XRE-family like proteins 
C628_RS06780	SM00479	C628_RS06780
C628_RS06820	SM00354	helix_turn _helix lactose operon repressor
C628_RS06825	SM00382	ATPases associated with a variety of cellular activities
C628_RS06850	SM00845	GatB domain
C628_RS06955	SM00903	Flavin reductase like domain
C628_RS06995	SM01329	C628_RS06995
C628_RS07010	SM00479	C628_RS07010
C628_RS07035	SM00530	Helix-turn-helix XRE-family like proteins 
C628_RS07145	SM00487	DEAD-like helicases superfamily
C628_RS07270	SM00450	Rhodanese Homology Domain
C628_RS07270	SM00849	Metallo-beta-lactamase superfamily
C628_RS07285	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C628_RS07290	SM00346	helix_turn_helix isocitrate lyase regulation
C628_RS07305	SM00855	Phosphoglycerate mutase family
C628_RS07335	SM00986	Uracil DNA glycosylase superfamily
C628_RS07335	SM00987	UreE urease accessory protein, C-terminal domain 
C628_RS07340	SM01120	C628_RS07340
C628_RS07340	SM01121	C628_RS07340
C628_RS07345	SM00487	DEAD-like helicases superfamily
C628_RS07345	SM00490	helicase superfamily c-terminal domain
C628_RS07365	SM00382	ATPases associated with a variety of cellular activities
C628_RS07375	SM00062	Bacterial periplasmic substrate-binding proteins
C628_RS07505	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
C628_RS07505	SM00474	3'-5' exonuclease
C628_RS07505	SM00475	5'-3' exonuclease
C628_RS07505	SM00482	DNA polymerase A domain
C628_RS07515	SM00530	Helix-turn-helix XRE-family like proteins 
C628_RS07530	SM00316	Ribosomal protein S1-like RNA-binding domain
C628_RS07545	SM00479	C628_RS07545
C628_RS07590	SM00354	helix_turn _helix lactose operon repressor
C628_RS07610	SM00382	ATPases associated with a variety of cellular activities
C628_RS07620	SM00487	DEAD-like helicases superfamily
C628_RS07620	SM00490	helicase superfamily c-terminal domain
C628_RS07660	SM00849	Metallo-beta-lactamase superfamily
C628_RS07665	SM00382	ATPases associated with a variety of cellular activities
C628_RS07730	SM00382	ATPases associated with a variety of cellular activities
C628_RS07740	SM00967	RNA 2'-O ribose methyltransferase substrate binding
C628_RS07750	SM00873	B3/4 domain
C628_RS07750	SM00874	tRNA synthetase B5 domain
C628_RS07750	SM00896	Ferredoxin-fold anticodon binding domain
C628_RS07770	SM00859	Semialdehyde dehydrogenase, NAD binding domain
C628_RS07815	SM00327	von Willebrand factor (vWF) type A domain
C628_RS07830	SM00363	S4 RNA-binding domain
C628_RS07875	SM00363	S4 RNA-binding domain
C628_RS07915	SM00382	ATPases associated with a variety of cellular activities
C628_RS07935	SM00450	Rhodanese Homology Domain
C628_RS07945	SM00363	S4 RNA-binding domain
C628_RS07965	SM00871	Bacterial transcription activator, effector binding domain
C628_RS07980	SM00382	ATPases associated with a variety of cellular activities
C628_RS08015	SM00957	SecA DEAD-like domain
C628_RS08015	SM00958	SecA preprotein cross-linking domain
C628_RS08020	SM00240	Forkhead associated domain
C628_RS08025	SM00422	helix_turn_helix, mercury resistance
C628_RS08035	SM00422	helix_turn_helix, mercury resistance
C628_RS08060	SM01091	Transporter associated domain
C628_RS08065	SM00487	DEAD-like helicases superfamily
C628_RS08065	SM00490	helicase superfamily c-terminal domain
C628_RS08075	SM01350	C628_RS08075
C628_RS08090	SM00382	ATPases associated with a variety of cellular activities
C628_RS08115	SM00382	ATPases associated with a variety of cellular activities
C628_RS08195	SM00867	YceI-like domain 
C628_RS08255	SM00487	DEAD-like helicases superfamily
C628_RS08255	SM00490	helicase superfamily c-terminal domain
C628_RS08255	SM01142	C628_RS08255
C628_RS08295	SM00382	ATPases associated with a variety of cellular activities
C628_RS08315	SM00530	Helix-turn-helix XRE-family like proteins 
C628_RS08345	SM01018	B12 binding domain
C628_RS08365	SM00226	Low molecular weight phosphatase family
C628_RS08370	SM00226	Low molecular weight phosphatase family
C628_RS08420	SM00382	ATPases associated with a variety of cellular activities
C628_RS08475	SM00244	prohibitin homologues
C628_RS08545	SM00831	Cation transporter/ATPase, N-terminus
C628_RS08595	SM00382	ATPases associated with a variety of cellular activities
C628_RS08655	SM00382	ATPases associated with a variety of cellular activities
C628_RS08670	SM00487	DEAD-like helicases superfamily
C628_RS08670	SM00490	helicase superfamily c-terminal domain
C628_RS08675	SM00829	Enoylreductase
C628_RS08685	SM00861	Transketolase, pyrimidine binding domain
C628_RS08745	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
C628_RS08765	SM00278	Helix-hairpin-helix DNA-binding motif class 1
C628_RS08765	SM00465	GIY-YIG type nucleases (URI domain)
C628_RS08830	SM01409	C628_RS08830
C628_RS08835	SM00072	Guanylate kinase homologues.
C628_RS08845	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
C628_RS08855	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
C628_RS08900	SM00841	Elongation factor P, C-terminal
C628_RS08900	SM01185	C628_RS08900
C628_RS08945	SM00382	ATPases associated with a variety of cellular activities
C628_RS08960	SM00732	Likely ribonuclease with RNase H fold.
C628_RS08965	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
C628_RS08970	SM00382	ATPases associated with a variety of cellular activities
C628_RS08990	SM00487	DEAD-like helicases superfamily
C628_RS08990	SM00490	helicase superfamily c-terminal domain
C628_RS09040	SM00849	Metallo-beta-lactamase superfamily
C628_RS09060	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C628_RS09060	SM00954	Region found in RelA / SpoT proteins
C628_RS09085	SM01323	C628_RS09085
C628_RS09090	SM00382	ATPases associated with a variety of cellular activities
C628_RS09145	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
C628_RS09250	SM00341	Helicase and RNase D C-terminal
C628_RS09250	SM00474	3'-5' exonuclease
C628_RS09255	SM00861	Transketolase, pyrimidine binding domain
C628_RS09315	SM00487	DEAD-like helicases superfamily
C628_RS09345	SM00529	Helix-turn-helix diphteria tox regulatory element
C628_RS09345	SM00899	C628_RS09345
C628_RS09365	SM00487	DEAD-like helicases superfamily
C628_RS09365	SM00490	helicase superfamily c-terminal domain
C628_RS09380	SM00382	ATPases associated with a variety of cellular activities
C628_RS09380	SM00487	DEAD-like helicases superfamily
C628_RS09380	SM00490	helicase superfamily c-terminal domain
C628_RS09380	SM00847	Helicase associated domain (HA2)  Add an annotation
C628_RS09400	SM00420	helix_turn_helix, Deoxyribose operon repressor
C628_RS09400	SM01134	C628_RS09400
C628_RS09415	SM00420	helix_turn_helix, Deoxyribose operon repressor
C628_RS09415	SM01134	C628_RS09415
C628_RS09435	SM00871	Bacterial transcription activator, effector binding domain
C628_RS09490	SM00729	Elongator protein 3, MiaB family, Radical SAM
C628_RS09495	SM00382	ATPases associated with a variety of cellular activities
C628_RS09500	SM00062	Bacterial periplasmic substrate-binding proteins
C628_RS09520	SM00382	ATPases associated with a variety of cellular activities
C628_RS09540	SM00382	ATPases associated with a variety of cellular activities
C628_RS09555	SM00530	Helix-turn-helix XRE-family like proteins 
C628_RS09585	SM00843	C628_RS09585
C628_RS09595	SM00849	Metallo-beta-lactamase superfamily
C628_RS09600	SM01130	C628_RS09600
C628_RS09620	SM00316	Ribosomal protein S1-like RNA-binding domain
C628_RS09620	SM00322	K homology RNA-binding domain
C628_RS09625	SM01387	C628_RS09625
C628_RS09635	SM00904	Riboflavin kinase
C628_RS09710	SM00382	ATPases associated with a variety of cellular activities
C628_RS09740	SM00327	von Willebrand factor (vWF) type A domain
C628_RS09745	SM00382	ATPases associated with a variety of cellular activities
C628_RS09795	SM00421	helix_turn_helix, Lux Regulon
C628_RS09795	SM00448	cheY-homologous receiver domain
C628_RS09800	SM00387	Histidine kinase-like ATPases
C628_RS09810	SM00382	ATPases associated with a variety of cellular activities
C628_RS09820	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C628_RS09845	SM00382	ATPases associated with a variety of cellular activities
C628_RS09850	SM00729	Elongator protein 3, MiaB family, Radical SAM
C628_RS09960	SM00316	Ribosomal protein S1-like RNA-binding domain
C628_RS09960	SM00732	Likely ribonuclease with RNase H fold.
C628_RS09965	SM00354	helix_turn _helix lactose operon repressor
C628_RS09975	SM00998	Adenylosuccinate lyase C-terminus
C628_RS10015	SM00248	ankyrin repeats
C628_RS10025	SM00382	ATPases associated with a variety of cellular activities
C628_RS10030	SM00382	ATPases associated with a variety of cellular activities
C628_RS10030	SM00962	SRP54-type protein, GTPase domain
C628_RS10030	SM00963	SRP54-type protein, helical bundle domain
C628_RS10035	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C628_RS10040	SM00938	Nitrogen regulatory protein P-II
C628_RS10050	SM00382	ATPases associated with a variety of cellular activities
C628_RS10050	SM00962	SRP54-type protein, GTPase domain
C628_RS10050	SM00963	SRP54-type protein, helical bundle domain
C628_RS10060	SM00968	SMC proteins Flexible Hinge Domain
C628_RS10095	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
C628_RS10095	SM01232	C628_RS10095
C628_RS10100	SM00358	Double-stranded RNA binding motif
C628_RS10100	SM00535	Ribonuclease III family
C628_RS10115	SM00382	ATPases associated with a variety of cellular activities
C628_RS10120	SM00382	ATPases associated with a variety of cellular activities
C628_RS10125	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
C628_RS10260	SM00642	Alpha-amylase domain
C628_RS10280	SM00354	helix_turn _helix lactose operon repressor
C628_RS10295	SM00382	ATPases associated with a variety of cellular activities
C628_RS10315	SM00479	C628_RS10315
C628_RS10325	SM00642	Alpha-amylase domain
C628_RS10330	SM00954	Region found in RelA / SpoT proteins
C628_RS10340	SM00363	S4 RNA-binding domain
C628_RS10375	SM00481	DNA polymerase alpha chain like domain
C628_RS10405	SM00382	ATPases associated with a variety of cellular activities
C628_RS10415	SM00870	C628_RS10415
C628_RS10435	SM00422	helix_turn_helix, mercury resistance
C628_RS10480	SM00864	Tubulin/FtsZ family, GTPase domain
C628_RS10480	SM00865	Tubulin/FtsZ family, C-terminal domain
C628_RS10580	SM00220	Serine/Threonine protein kinases, catalytic domain
C628_RS10580	SM00740	C628_RS10580
C628_RS10625	SM00563	Phosphate acyltransferases
C628_RS10745	SM00729	Elongator protein 3, MiaB family, Radical SAM
C628_RS10765	SM01230	C628_RS10765
C628_RS10830	SM01230	C628_RS10830
C628_RS10855	SM00880	C628_RS10855
C628_RS10855	SM01118	C628_RS10855
C628_RS10870	SM00955	C628_RS10870
C628_RS10885	SM00855	Phosphoglycerate mutase family
C628_RS10905	SM00226	Low molecular weight phosphatase family
C628_RS10945	SM00382	ATPases associated with a variety of cellular activities
C628_RS11060	SM00400	zinc finger
C628_RS11060	SM00493	C628_RS11060
C628_RS11060	SM00766	DNA primase DnaG DnaB-binding
C628_RS11100	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C628_RS11130	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C628_RS11165	SM00116	Domain in cystathionine beta-synthase and other proteins.
C628_RS11165	SM01091	Transporter associated domain
C628_RS11185	SM00271	DnaJ molecular chaperone homology domain
C628_RS11195	SM00729	Elongator protein 3, MiaB family, Radical SAM
C628_RS11225	SM00382	ATPases associated with a variety of cellular activities
C628_RS11245	SM00642	Alpha-amylase domain
C628_RS11315	SM00895	C628_RS11315
C628_RS11350	SM00382	ATPases associated with a variety of cellular activities
C628_RS11440	SM00838	Elongation factor G C-terminus
C628_RS11460	SM00248	ankyrin repeats
C628_RS11475	SM00278	Helix-hairpin-helix DNA-binding motif class 1
C628_RS11485	SM00855	Phosphoglycerate mutase family
C628_RS11500	SM01110	C628_RS11500
C628_RS11515	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
C628_RS11555	SM00316	Ribosomal protein S1-like RNA-binding domain
C628_RS11575	SM00562	C628_RS11575
C628_RS11660	SM00382	ATPases associated with a variety of cellular activities
C628_RS11660	SM00994	ClpX C4-type zinc finger
C628_RS11660	SM01086	C-terminal, D2-small domain, of ClpB protein
C628_RS11670	SM00882	Coenzyme A transferase
C628_RS11675	SM00882	Coenzyme A transferase
C628_RS11680	SM00346	helix_turn_helix isocitrate lyase regulation
C628_RS11695	SM00421	helix_turn_helix, Lux Regulon
C628_RS11720	SM00507	HNH nucleases
C628_RS11730	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
C628_RS11750	SM00895	C628_RS11750
C628_RS11760	SM00421	helix_turn_helix, Lux Regulon
C628_RS11875	SM00382	ATPases associated with a variety of cellular activities
C628_RS11930	SM00382	ATPases associated with a variety of cellular activities
C628_RS11960	SM00382	ATPases associated with a variety of cellular activities
C628_RS12020	SM00382	ATPases associated with a variety of cellular activities
C628_RS12055	SM00829	Enoylreductase
C628_RS12085	SM01001	AIR carboxylase
C628_RS12100	SM00822	C628_RS12100
C628_RS12105	SM00479	C628_RS12105
C628_RS12225	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
C628_RS12380	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C628_RS12400	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C628_RS12410	SM00756	C628_RS12410
C628_RS12445	SM00422	helix_turn_helix, mercury resistance
C628_RS12485	SM00347	helix_turn_helix multiple antibiotic resistance protein
C628_RS12520	SM00487	DEAD-like helicases superfamily
C628_RS12520	SM00491	C628_RS12520
C628_RS12555	SM00530	Helix-turn-helix XRE-family like proteins 
C628_RS12570	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C628_RS12570	SM00895	C628_RS12570
C628_RS12575	SM00529	Helix-turn-helix diphteria tox regulatory element
C628_RS12575	SM00899	C628_RS12575
C628_RS12620	SM00829	Enoylreductase
C628_RS12680	SM00382	ATPases associated with a variety of cellular activities
C628_RS12750	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
C628_RS12750	SM00421	helix_turn_helix, Lux Regulon
C628_RS12785	SM00881	CoA binding domain
C628_RS12835	SM00382	ATPases associated with a variety of cellular activities
C628_RS12865	SM00046	Diacylglycerol kinase catalytic domain (presumed)
C628_RS12930	SM01211	C628_RS12930
C628_RS12970	SM00998	Adenylosuccinate lyase C-terminus
C628_RS12980	SM01209	C628_RS12980
C628_RS12980	SM01210	C628_RS12980
C628_RS13010	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C628_RS13010	SM00387	Histidine kinase-like ATPases
C628_RS13010	SM00388	His Kinase A (phosphoacceptor) domain
C628_RS13015	SM00448	cheY-homologous receiver domain
C628_RS13015	SM00862	Transcriptional regulatory protein, C terminal
C628_RS13020	SM00422	helix_turn_helix, mercury resistance
C628_RS13025	SM01119	C628_RS13025
C628_RS13105	SM00530	Helix-turn-helix XRE-family like proteins 
C628_RS13140	SM00354	helix_turn _helix lactose operon repressor
C628_RS13150	SM00382	ATPases associated with a variety of cellular activities
C628_RS13190	SM00967	RNA 2'-O ribose methyltransferase substrate binding
C628_RS13195	SM00840	C628_RS13195
C628_RS13205	SM00640	Glycosyl hydrolases family 32
C628_RS13220	SM01130	C628_RS13220
C628_RS13255	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C628_RS13255	SM00895	C628_RS13255
C628_RS13265	SM00382	ATPases associated with a variety of cellular activities
C628_RS13275	SM00344	helix_turn_helix ASNC type
C628_RS13295	SM01058	CarD-like/TRCF domain
C628_RS13300	SM00448	cheY-homologous receiver domain
C628_RS13300	SM00862	Transcriptional regulatory protein, C terminal
C628_RS13305	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C628_RS13305	SM00387	Histidine kinase-like ATPases
C628_RS13305	SM00388	His Kinase A (phosphoacceptor) domain
C628_RS13315	SM00382	ATPases associated with a variety of cellular activities
C628_RS13335	SM00947	Carbonic anhydrase
C628_RS13340	SM00478	endonuclease III
C628_RS13340	SM00525	C628_RS13340
C628_RS13365	SM00382	ATPases associated with a variety of cellular activities
C628_RS13365	SM01086	C-terminal, D2-small domain, of ClpB protein
C628_RS13370	SM00116	Domain in cystathionine beta-synthase and other proteins.
C628_RS13370	SM01240	C628_RS13370
C628_RS13380	SM00342	helix_turn_helix, arabinose operon control protein
C628_RS13440	SM00905	Dihydroneopterin aldolase
C628_RS13455	SM00382	ATPases associated with a variety of cellular activities
C628_RS13525	SM00450	Rhodanese Homology Domain
C628_RS13530	SM00347	helix_turn_helix multiple antibiotic resistance protein
C628_RS13535	SM00823	Phosphopantetheine attachment site
C628_RS13680	SM00155	Phospholipase D. Active site motifs.
C628_RS13705	SM00382	ATPases associated with a variety of cellular activities
C628_RS13735	SM00062	Bacterial periplasmic substrate-binding proteins
C628_RS13790	SM00788	Adenylosuccinate synthetase
C628_RS13840	SM00450	Rhodanese Homology Domain
C628_RS13865	SM00382	ATPases associated with a variety of cellular activities
C628_RS13865	SM01086	C-terminal, D2-small domain, of ClpB protein
C628_RS13875	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C628_RS13900	SM00530	Helix-turn-helix XRE-family like proteins 
C628_RS13940	SM00422	helix_turn_helix, mercury resistance
C628_RS13945	SM00271	DnaJ molecular chaperone homology domain
C628_RS13990	SM00829	Enoylreductase
C628_RS14075	SM00382	ATPases associated with a variety of cellular activities
C628_RS14080	SM00382	ATPases associated with a variety of cellular activities
C628_RS14170	SM00244	prohibitin homologues
C628_RS14230	SM00984	UDP binding domain
C628_RS14350	SM00823	Phosphopantetheine attachment site
C628_RS14350	SM00824	Thioesterase
C628_RS14350	SM00825	Beta-ketoacyl synthase
C628_RS14350	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
C628_RS14360	SM01110	C628_RS14360
C628_RS14375	SM00507	HNH nucleases
C628_RS14395	SM00014	Acid phosphatase homologues
C628_RS14410	SM00014	Acid phosphatase homologues
C628_RS14430	SM00644	C628_RS14430
C628_RS14430	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
C628_RS14445	SM00563	Phosphate acyltransferases
C628_RS14455	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C628_RS14455	SM00866	C628_RS14455
C628_RS14470	SM00855	Phosphoglycerate mutase family
C628_RS14555	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C628_RS14555	SM00895	C628_RS14555
C628_RS14590	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C628_RS14590	SM00895	C628_RS14590
C628_RS14600	SM01150	C628_RS14600
C628_RS14610	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
C628_RS14670	SM00347	helix_turn_helix multiple antibiotic resistance protein
C628_RS14675	SM00421	helix_turn_helix, Lux Regulon
C628_RS14675	SM00448	cheY-homologous receiver domain
C628_RS14680	SM00387	Histidine kinase-like ATPases
C628_RS14755	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C628_RS14795	SM00829	Enoylreductase
C628_RS14885	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C628_RS14885	SM00387	Histidine kinase-like ATPases
C628_RS14885	SM00388	His Kinase A (phosphoacceptor) domain
C628_RS14890	SM00448	cheY-homologous receiver domain
C628_RS14890	SM00862	Transcriptional regulatory protein, C terminal
C628_RS14945	SM00857	Resolvase, N terminal domain
C628_RS14950	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C628_RS14965	SM00422	helix_turn_helix, mercury resistance
C628_RS15010	SM00100	Cyclic nucleotide-monophosphate binding domain
C628_RS15010	SM00419	helix_turn_helix, cAMP Regulatory protein
C628_RS15070	SM00382	ATPases associated with a variety of cellular activities
C628_RS15110	SM00347	helix_turn_helix multiple antibiotic resistance protein
C628_RS15130	SM00450	Rhodanese Homology Domain
C628_RS15140	SM00382	ATPases associated with a variety of cellular activities
C628_RS15185	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
C628_RS15185	SM01232	C628_RS15185
C628_RS15200	SM00829	Enoylreductase
C628_RS15230	SM00919	Malic enzyme, NAD binding domain
C628_RS15230	SM01274	C628_RS15230
C628_RS15300	SM00530	Helix-turn-helix XRE-family like proteins 
C628_RS15395	SM00382	ATPases associated with a variety of cellular activities
C628_RS15425	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C628_RS15490	SM00346	helix_turn_helix isocitrate lyase regulation
C628_RS15540	SM00382	ATPases associated with a variety of cellular activities
C628_RS15550	SM00829	Enoylreductase
C628_RS15600	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C628_RS15635	SM00646	C628_RS15635
C628_RS15645	SM00470	ParB-like nuclease domain
