CPF12_RS00005 SM00322 K homology RNA-binding domain CPF12_RS00005 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CPF12_RS00010 SM00382 ATPases associated with a variety of cellular activities CPF12_RS00015 SM00852 Probable molybdopterin binding domain CPF12_RS00025 SM00530 Helix-turn-helix XRE-family like proteins CPF12_RS00040 SM00843 CPF12_RS00040 CPF12_RS00150 SM00855 Phosphoglycerate mutase family CPF12_RS00180 SM00877 CPF12_RS00180 CPF12_RS00190 SM00877 CPF12_RS00190 CPF12_RS00195 SM00877 CPF12_RS00195 CPF12_RS00215 SM00387 Histidine kinase-like ATPases CPF12_RS00220 SM00448 cheY-homologous receiver domain CPF12_RS00220 SM01012 CPF12_RS00220 CPF12_RS00225 SM00877 CPF12_RS00225 CPF12_RS00260 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CPF12_RS00275 SM00382 ATPases associated with a variety of cellular activities CPF12_RS00280 SM00342 helix_turn_helix, arabinose operon control protein CPF12_RS00280 SM00448 cheY-homologous receiver domain CPF12_RS00315 SM00345 helix_turn_helix gluconate operon transcriptional repressor CPF12_RS00320 SM01149 CPF12_RS00320 CPF12_RS00325 SM00872 Alpha mannosidase, middle domain CPF12_RS00345 SM00479 CPF12_RS00345 CPF12_RS00360 SM00872 Alpha mannosidase, middle domain CPF12_RS00420 SM00382 ATPases associated with a variety of cellular activities CPF12_RS00470 SM00347 helix_turn_helix multiple antibiotic resistance protein CPF12_RS00485 SM00382 ATPases associated with a variety of cellular activities CPF12_RS00505 SM00822 CPF12_RS00505 CPF12_RS00510 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CPF12_RS00510 SM00387 Histidine kinase-like ATPases CPF12_RS00515 SM00448 cheY-homologous receiver domain CPF12_RS00515 SM00850 LytTr DNA-binding domain CPF12_RS00600 SM00927 DNA mismatch repair enzyme MutH CPF12_RS00650 SM00382 ATPases associated with a variety of cellular activities CPF12_RS00660 SM00382 ATPases associated with a variety of cellular activities CPF12_RS00675 SM00825 Beta-ketoacyl synthase CPF12_RS00690 SM00382 ATPases associated with a variety of cellular activities CPF12_RS00700 SM00420 helix_turn_helix, Deoxyribose operon repressor CPF12_RS00700 SM01134 CPF12_RS00700 CPF12_RS00710 SM01120 CPF12_RS00710 CPF12_RS00710 SM01121 CPF12_RS00710 CPF12_RS00765 SM00347 helix_turn_helix multiple antibiotic resistance protein CPF12_RS00785 SM00347 helix_turn_helix multiple antibiotic resistance protein CPF12_RS00795 SM00382 ATPases associated with a variety of cellular activities CPF12_RS00805 SM00530 Helix-turn-helix XRE-family like proteins CPF12_RS00845 SM00047 Lysozyme subfamily 2 CPF12_RS00845 SM00257 Lysin motif CPF12_RS00875 SM00382 ATPases associated with a variety of cellular activities CPF12_RS00900 SM00642 Alpha-amylase domain CPF12_RS00930 SM00354 helix_turn _helix lactose operon repressor CPF12_RS00955 SM00382 ATPases associated with a variety of cellular activities CPF12_RS00980 SM00387 Histidine kinase-like ATPases CPF12_RS00980 SM00388 His Kinase A (phosphoacceptor) domain CPF12_RS00985 SM00448 cheY-homologous receiver domain CPF12_RS00985 SM00862 Transcriptional regulatory protein, C terminal CPF12_RS01140 SM00382 ATPases associated with a variety of cellular activities CPF12_RS01140 SM00994 ClpX C4-type zinc finger CPF12_RS01140 SM01086 C-terminal, D2-small domain, of ClpB protein CPF12_RS01255 SM00287 Bacterial SH3 domain homologues CPF12_RS01255 SM00644 CPF12_RS01255 CPF12_RS01330 SM00530 Helix-turn-helix XRE-family like proteins CPF12_RS01335 SM00530 Helix-turn-helix XRE-family like proteins CPF12_RS01360 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CPF12_RS01360 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CPF12_RS01360 SM00493 CPF12_RS01360 CPF12_RS01390 SM00347 helix_turn_helix multiple antibiotic resistance protein CPF12_RS01425 SM00849 Metallo-beta-lactamase superfamily CPF12_RS01435 SM00421 helix_turn_helix, Lux Regulon CPF12_RS01435 SM00448 cheY-homologous receiver domain CPF12_RS01440 SM00387 Histidine kinase-like ATPases CPF12_RS01500 SM00878 Biotin carboxylase C-terminal domain CPF12_RS01520 SM00450 Rhodanese Homology Domain CPF12_RS01525 SM00919 Malic enzyme, NAD binding domain CPF12_RS01525 SM01274 CPF12_RS01525 CPF12_RS01635 SM00028 Tetratricopeptide repeats CPF12_RS01685 SM00530 Helix-turn-helix XRE-family like proteins CPF12_RS01700 SM00382 ATPases associated with a variety of cellular activities CPF12_RS01720 SM00354 helix_turn _helix lactose operon repressor CPF12_RS01755 SM00226 Low molecular weight phosphatase family CPF12_RS01765 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CPF12_RS01795 SM00861 Transketolase, pyrimidine binding domain CPF12_RS01820 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CPF12_RS01825 SM00287 Bacterial SH3 domain homologues CPF12_RS01825 SM00646 CPF12_RS01825 CPF12_RS01835 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CPF12_RS01835 SM00954 Region found in RelA / SpoT proteins CPF12_RS01865 SM01323 CPF12_RS01865 CPF12_RS01880 SM00382 ATPases associated with a variety of cellular activities CPF12_RS01885 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CPF12_RS01925 SM01329 CPF12_RS01925 CPF12_RS01930 SM00917 LeuA allosteric (dimerisation) domain CPF12_RS01955 SM00357 Cold shock protein domain CPF12_RS01960 SM00014 Acid phosphatase homologues CPF12_RS01980 SM00363 S4 RNA-binding domain CPF12_RS02000 SM00864 Tubulin/FtsZ family, GTPase domain CPF12_RS02000 SM00865 Tubulin/FtsZ family, C-terminal domain CPF12_RS02005 SM00842 Cell division protein FtsA CPF12_RS02035 SM00740 CPF12_RS02035 CPF12_RS02115 SM00878 Biotin carboxylase C-terminal domain CPF12_RS02135 SM00838 Elongation factor G C-terminus CPF12_RS02200 SM00861 Transketolase, pyrimidine binding domain CPF12_RS02235 SM00382 ATPases associated with a variety of cellular activities CPF12_RS02260 SM00382 ATPases associated with a variety of cellular activities CPF12_RS02320 SM00859 Semialdehyde dehydrogenase, NAD binding domain CPF12_RS02325 SM00465 GIY-YIG type nucleases (URI domain) CPF12_RS02350 SM00463 Small MutS-related domain CPF12_RS02350 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CPF12_RS02350 SM00534 ATPase domain of DNA mismatch repair MUTS family CPF12_RS02365 SM00873 B3/4 domain CPF12_RS02365 SM00874 tRNA synthetase B5 domain CPF12_RS02365 SM00896 Ferredoxin-fold anticodon binding domain CPF12_RS02385 SM00967 RNA 2'-O ribose methyltransferase substrate binding CPF12_RS02400 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CPF12_RS02400 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CPF12_RS02400 SM00493 CPF12_RS02400 CPF12_RS02455 SM00354 helix_turn _helix lactose operon repressor CPF12_RS02465 SM01217 CPF12_RS02465 CPF12_RS02485 SM00382 ATPases associated with a variety of cellular activities CPF12_RS02605 SM00954 Region found in RelA / SpoT proteins CPF12_RS02625 SM01118 CPF12_RS02625 CPF12_RS02650 SM00382 ATPases associated with a variety of cellular activities CPF12_RS02655 SM00062 Bacterial periplasmic substrate-binding proteins CPF12_RS02655 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CPF12_RS02705 SM00382 ATPases associated with a variety of cellular activities CPF12_RS02720 SM00825 Beta-ketoacyl synthase CPF12_RS02735 SM00855 Phosphoglycerate mutase family CPF12_RS02740 SM00382 ATPases associated with a variety of cellular activities CPF12_RS02740 SM01086 C-terminal, D2-small domain, of ClpB protein CPF12_RS02850 SM00382 ATPases associated with a variety of cellular activities CPF12_RS02935 SM00567 E-Z type HEAT repeats CPF12_RS02950 SM00530 Helix-turn-helix XRE-family like proteins CPF12_RS02955 SM01264 CPF12_RS02955 CPF12_RS02970 SM00382 ATPases associated with a variety of cellular activities CPF12_RS02980 SM00062 Bacterial periplasmic substrate-binding proteins CPF12_RS02980 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CPF12_RS03050 SM00382 ATPases associated with a variety of cellular activities CPF12_RS03085 SM00347 helix_turn_helix multiple antibiotic resistance protein CPF12_RS03095 SM00829 Enoylreductase CPF12_RS03110 SM00829 Enoylreductase CPF12_RS03125 SM00344 helix_turn_helix ASNC type CPF12_RS03140 SM00829 Enoylreductase CPF12_RS03170 SM01266 CPF12_RS03170 CPF12_RS03275 SM00421 helix_turn_helix, Lux Regulon CPF12_RS03280 SM00867 YceI-like domain CPF12_RS03345 SM00382 ATPases associated with a variety of cellular activities CPF12_RS03350 SM00382 ATPases associated with a variety of cellular activities CPF12_RS03365 SM00957 SecA DEAD-like domain CPF12_RS03365 SM00958 SecA preprotein cross-linking domain CPF12_RS03370 SM00257 Lysin motif CPF12_RS03450 SM00450 Rhodanese Homology Domain CPF12_RS03455 SM00347 helix_turn_helix multiple antibiotic resistance protein CPF12_RS03515 SM00857 Resolvase, N terminal domain CPF12_RS03545 SM00327 von Willebrand factor (vWF) type A domain CPF12_RS03670 SM00420 helix_turn_helix, Deoxyribose operon repressor CPF12_RS03685 SM00357 Cold shock protein domain CPF12_RS03710 SM00382 ATPases associated with a variety of cellular activities CPF12_RS03715 SM00382 ATPases associated with a variety of cellular activities CPF12_RS03735 SM00855 Phosphoglycerate mutase family CPF12_RS03740 SM00954 Region found in RelA / SpoT proteins CPF12_RS03750 SM01022 CPF12_RS03750 CPF12_RS03830 SM00257 Lysin motif CPF12_RS03860 SM00382 ATPases associated with a variety of cellular activities CPF12_RS03880 SM01120 CPF12_RS03880 CPF12_RS03915 SM00382 ATPases associated with a variety of cellular activities CPF12_RS03970 SM00382 ATPases associated with a variety of cellular activities CPF12_RS03970 SM00930 CPF12_RS03970 CPF12_RS04000 SM00382 ATPases associated with a variety of cellular activities CPF12_RS04070 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CPF12_RS04080 SM00382 ATPases associated with a variety of cellular activities CPF12_RS04095 SM00382 ATPases associated with a variety of cellular activities CPF12_RS04160 SM00530 Helix-turn-helix XRE-family like proteins CPF12_RS04170 SM00345 helix_turn_helix gluconate operon transcriptional repressor CPF12_RS04175 SM00382 ATPases associated with a variety of cellular activities CPF12_RS04185 SM00419 helix_turn_helix, cAMP Regulatory protein CPF12_RS04280 SM00047 Lysozyme subfamily 2 CPF12_RS04310 SM00382 ATPases associated with a variety of cellular activities CPF12_RS04360 SM01061 CAT RNA binding domain CPF12_RS04370 SM00829 Enoylreductase CPF12_RS04375 SM00870 CPF12_RS04375 CPF12_RS04385 SM01061 CAT RNA binding domain CPF12_RS04405 SM00342 helix_turn_helix, arabinose operon control protein CPF12_RS04405 SM00448 cheY-homologous receiver domain CPF12_RS04410 SM00387 Histidine kinase-like ATPases CPF12_RS04420 SM00382 ATPases associated with a variety of cellular activities CPF12_RS04435 SM00342 helix_turn_helix, arabinose operon control protein CPF12_RS04445 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CPF12_RS04445 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CPF12_RS04475 SM00062 Bacterial periplasmic substrate-binding proteins CPF12_RS04480 SM00062 Bacterial periplasmic substrate-binding proteins CPF12_RS04495 SM00382 ATPases associated with a variety of cellular activities CPF12_RS04585 SM00382 ATPases associated with a variety of cellular activities CPF12_RS04590 SM00740 CPF12_RS04590 CPF12_RS04615 SM00347 helix_turn_helix multiple antibiotic resistance protein CPF12_RS04635 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CPF12_RS04635 SM00387 Histidine kinase-like ATPases CPF12_RS04635 SM00388 His Kinase A (phosphoacceptor) domain CPF12_RS04640 SM00448 cheY-homologous receiver domain CPF12_RS04640 SM00862 Transcriptional regulatory protein, C terminal CPF12_RS04645 SM00047 Lysozyme subfamily 2 CPF12_RS04675 SM01266 CPF12_RS04675 CPF12_RS04680 SM00530 Helix-turn-helix XRE-family like proteins CPF12_RS04685 SM00825 Beta-ketoacyl synthase CPF12_RS04700 SM00382 ATPases associated with a variety of cellular activities CPF12_RS04715 SM00841 Elongation factor P, C-terminal CPF12_RS04715 SM01185 CPF12_RS04715 CPF12_RS04735 SM00345 helix_turn_helix gluconate operon transcriptional repressor CPF12_RS04735 SM00866 CPF12_RS04735 CPF12_RS04755 SM01061 CAT RNA binding domain CPF12_RS04855 SM00850 LytTr DNA-binding domain CPF12_RS04995 SM00382 ATPases associated with a variety of cellular activities CPF12_RS05000 SM00387 Histidine kinase-like ATPases CPF12_RS05000 SM00388 His Kinase A (phosphoacceptor) domain CPF12_RS05005 SM00448 cheY-homologous receiver domain CPF12_RS05005 SM00862 Transcriptional regulatory protein, C terminal CPF12_RS05015 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CPF12_RS05020 SM00849 Metallo-beta-lactamase superfamily CPF12_RS05035 SM00091 PAS domain CPF12_RS05035 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CPF12_RS05035 SM00387 Histidine kinase-like ATPases CPF12_RS05035 SM00388 His Kinase A (phosphoacceptor) domain CPF12_RS05040 SM00448 cheY-homologous receiver domain CPF12_RS05040 SM00862 Transcriptional regulatory protein, C terminal CPF12_RS05050 SM00382 ATPases associated with a variety of cellular activities CPF12_RS05090 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CPF12_RS05115 SM00530 Helix-turn-helix XRE-family like proteins CPF12_RS05135 SM01133 CPF12_RS05135 CPF12_RS05190 SM00903 Flavin reductase like domain CPF12_RS05275 SM00342 helix_turn_helix, arabinose operon control protein CPF12_RS05280 SM00530 Helix-turn-helix XRE-family like proteins CPF12_RS05295 SM00342 helix_turn_helix, arabinose operon control protein CPF12_RS05330 SM00788 Adenylosuccinate synthetase CPF12_RS05360 SM00267 diguanylate cyclase CPF12_RS05390 SM00421 helix_turn_helix, Lux Regulon CPF12_RS05400 SM00530 Helix-turn-helix XRE-family like proteins CPF12_RS05440 SM00470 ParB-like nuclease domain CPF12_RS05450 SM00530 Helix-turn-helix XRE-family like proteins CPF12_RS05460 SM00470 ParB-like nuclease domain CPF12_RS05470 SM01228 CPF12_RS05470 CPF12_RS05495 SM00382 ATPases associated with a variety of cellular activities CPF12_RS05495 SM00760 Bacterial dnaA protein helix-turn-helix domain CPF12_RS05500 SM00480 DNA polymerase III beta subunit CPF12_RS05505 SM00530 Helix-turn-helix XRE-family like proteins CPF12_RS05515 SM00530 Helix-turn-helix XRE-family like proteins CPF12_RS05530 SM00387 Histidine kinase-like ATPases CPF12_RS05530 SM00433 TopoisomeraseII CPF12_RS05535 SM00434 DNA Topoisomerase IV CPF12_RS05565 SM00116 Domain in cystathionine beta-synthase and other proteins. CPF12_RS05565 SM01240 CPF12_RS05565 CPF12_RS05570 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CPF12_RS05575 SM00936 Penicillin-binding protein 5, C-terminal domain CPF12_RS05600 SM01240 CPF12_RS05600 CPF12_RS05615 SM00382 ATPases associated with a variety of cellular activities CPF12_RS05620 SM00382 ATPases associated with a variety of cellular activities CPF12_RS05630 SM00530 Helix-turn-helix XRE-family like proteins CPF12_RS05635 SM00530 Helix-turn-helix XRE-family like proteins CPF12_RS05640 SM00382 ATPases associated with a variety of cellular activities CPF12_RS05650 SM00493 CPF12_RS05650 CPF12_RS05715 SM01208 CPF12_RS05715 CPF12_RS05720 SM00493 CPF12_RS05720 CPF12_RS05725 SM00650 Ribosomal RNA adenine dimethylases CPF12_RS05755 SM01400 CPF12_RS05755 CPF12_RS05780 SM00487 DEAD-like helicases superfamily CPF12_RS05780 SM00490 helicase superfamily c-terminal domain CPF12_RS05780 SM00982 CPF12_RS05780 CPF12_RS05780 SM01058 CarD-like/TRCF domain CPF12_RS05790 SM00363 S4 RNA-binding domain CPF12_RS05800 SM00316 Ribosomal protein S1-like RNA-binding domain CPF12_RS05805 SM00977 TilS substrate C-terminal domain CPF12_RS05815 SM00382 ATPases associated with a variety of cellular activities CPF12_RS05835 SM00905 Dihydroneopterin aldolase CPF12_RS05920 SM00382 ATPases associated with a variety of cellular activities CPF12_RS05920 SM01086 C-terminal, D2-small domain, of ClpB protein CPF12_RS05925 SM00382 ATPases associated with a variety of cellular activities CPF12_RS05930 SM00670 Large family of predicted nucleotide-binding domains CPF12_RS05955 SM00840 CPF12_RS05955 CPF12_RS05960 SM00535 Ribonuclease III family CPF12_RS05965 SM00967 RNA 2'-O ribose methyltransferase substrate binding CPF12_RS05990 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CPF12_RS05990 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CPF12_RS05995 SM00649 Ribosomal protein L11/L12 CPF12_RS06025 SM00663 RNA polymerase I subunit A N-terminus CPF12_RS06040 SM00838 Elongation factor G C-terminus CPF12_RS06040 SM00889 Elongation factor G, domain IV CPF12_RS06055 SM01403 CPF12_RS06055 CPF12_RS06075 SM01382 CPF12_RS06075 CPF12_RS06075 SM01383 CPF12_RS06075 CPF12_RS06090 SM00322 K homology RNA-binding domain CPF12_RS06110 SM01374 CPF12_RS06110 CPF12_RS06115 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CPF12_RS06170 SM00316 Ribosomal protein S1-like RNA-binding domain CPF12_RS06190 SM00662 RNA polymerases D CPF12_RS06200 SM00382 ATPases associated with a variety of cellular activities CPF12_RS06205 SM00382 ATPases associated with a variety of cellular activities CPF12_RS06240 SM00849 Metallo-beta-lactamase superfamily CPF12_RS06275 SM00382 ATPases associated with a variety of cellular activities CPF12_RS06380 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CPF12_RS06400 SM00836 DALR anticodon binding domain CPF12_RS06400 SM01016 Arginyl tRNA synthetase N terminal dom CPF12_RS06420 SM00357 Cold shock protein domain CPF12_RS06420 SM00382 ATPases associated with a variety of cellular activities CPF12_RS06420 SM00959 Rho termination factor, N-terminal domain CPF12_RS06435 SM00937 CPF12_RS06435 CPF12_RS06495 SM00382 ATPases associated with a variety of cellular activities CPF12_RS06530 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CPF12_RS06580 SM00984 UDP binding domain CPF12_RS06620 SM00421 helix_turn_helix, Lux Regulon CPF12_RS06620 SM00448 cheY-homologous receiver domain CPF12_RS06630 SM00487 DEAD-like helicases superfamily CPF12_RS06630 SM00490 helicase superfamily c-terminal domain CPF12_RS06645 SM00957 SecA DEAD-like domain CPF12_RS06645 SM00958 SecA preprotein cross-linking domain CPF12_RS06660 SM00382 ATPases associated with a variety of cellular activities CPF12_RS06675 SM00155 Phospholipase D. Active site motifs. CPF12_RS06685 SM01400 CPF12_RS06685 CPF12_RS06690 SM00448 cheY-homologous receiver domain CPF12_RS06690 SM00862 Transcriptional regulatory protein, C terminal CPF12_RS06695 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CPF12_RS06695 SM00387 Histidine kinase-like ATPases CPF12_RS06695 SM00388 His Kinase A (phosphoacceptor) domain CPF12_RS06710 SM00382 ATPases associated with a variety of cellular activities CPF12_RS06715 SM00382 ATPases associated with a variety of cellular activities CPF12_RS06740 SM00487 DEAD-like helicases superfamily CPF12_RS06740 SM00490 helicase superfamily c-terminal domain CPF12_RS06860 SM00642 Alpha-amylase domain CPF12_RS06865 SM00345 helix_turn_helix gluconate operon transcriptional repressor CPF12_RS06865 SM00866 CPF12_RS06865 CPF12_RS06900 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CPF12_RS06920 SM01192 CPF12_RS06920 CPF12_RS06920 SM01193 CPF12_RS06920 CPF12_RS07000 SM01131 CPF12_RS07000 CPF12_RS07005 SM00382 ATPases associated with a variety of cellular activities CPF12_RS07120 SM00316 Ribosomal protein S1-like RNA-binding domain CPF12_RS07260 SM00342 helix_turn_helix, arabinose operon control protein CPF12_RS07270 SM01217 CPF12_RS07270 CPF12_RS07290 SM00855 Phosphoglycerate mutase family CPF12_RS07310 SM00382 ATPases associated with a variety of cellular activities CPF12_RS07325 SM00342 helix_turn_helix, arabinose operon control protein CPF12_RS07330 SM00530 Helix-turn-helix XRE-family like proteins CPF12_RS07500 SM00382 ATPases associated with a variety of cellular activities CPF12_RS07535 SM00382 ATPases associated with a variety of cellular activities CPF12_RS07560 SM00530 Helix-turn-helix XRE-family like proteins CPF12_RS07565 SM00530 Helix-turn-helix XRE-family like proteins CPF12_RS07580 SM00316 Ribosomal protein S1-like RNA-binding domain CPF12_RS07580 SM00357 Cold shock protein domain CPF12_RS07580 SM00955 CPF12_RS07580 CPF12_RS07620 SM00347 helix_turn_helix multiple antibiotic resistance protein CPF12_RS07635 SM00812 Alpha-L-fucosidase CPF12_RS07640 SM00354 helix_turn _helix lactose operon repressor CPF12_RS07665 SM00420 helix_turn_helix, Deoxyribose operon repressor CPF12_RS07665 SM01134 CPF12_RS07665 CPF12_RS07670 SM00382 ATPases associated with a variety of cellular activities CPF12_RS07685 SM00347 helix_turn_helix multiple antibiotic resistance protein CPF12_RS07700 SM00046 Diacylglycerol kinase catalytic domain (presumed) CPF12_RS07720 SM00382 ATPases associated with a variety of cellular activities CPF12_RS07745 SM00642 Alpha-amylase domain CPF12_RS07750 SM00642 Alpha-amylase domain CPF12_RS07755 SM00354 helix_turn _helix lactose operon repressor CPF12_RS07800 SM00382 ATPases associated with a variety of cellular activities CPF12_RS07800 SM00930 CPF12_RS07800 CPF12_RS07820 SM00382 ATPases associated with a variety of cellular activities CPF12_RS07850 SM00345 helix_turn_helix gluconate operon transcriptional repressor CPF12_RS07850 SM00866 CPF12_RS07850 CPF12_RS07865 SM00354 helix_turn _helix lactose operon repressor CPF12_RS07870 SM00640 Glycosyl hydrolases family 32 CPF12_RS07880 SM00642 Alpha-amylase domain CPF12_RS07910 SM00345 helix_turn_helix gluconate operon transcriptional repressor CPF12_RS07910 SM00895 CPF12_RS07910 CPF12_RS07980 SM00420 helix_turn_helix, Deoxyribose operon repressor CPF12_RS07980 SM01134 CPF12_RS07980 CPF12_RS08000 SM00116 Domain in cystathionine beta-synthase and other proteins. CPF12_RS08000 SM01091 Transporter associated domain CPF12_RS08015 SM00530 Helix-turn-helix XRE-family like proteins CPF12_RS08020 SM00530 Helix-turn-helix XRE-family like proteins CPF12_RS08040 SM00942 Primase C terminal 1 (PriCT-1) CPF12_RS08040 SM00943 Bifunctional DNA primase/polymerase, N-terminal CPF12_RS08045 SM00885 D5 N terminal like CPF12_RS08090 SM00530 Helix-turn-helix XRE-family like proteins CPF12_RS08095 SM00382 ATPases associated with a variety of cellular activities CPF12_RS08115 SM01057 Eukaryotic-type carbonic anhydrase CPF12_RS08140 SM01060 CPF12_RS08140 CPF12_RS08155 SM00226 Low molecular weight phosphatase family CPF12_RS08235 SM00530 Helix-turn-helix XRE-family like proteins CPF12_RS08255 SM00942 Primase C terminal 1 (PriCT-1) CPF12_RS08255 SM00943 Bifunctional DNA primase/polymerase, N-terminal CPF12_RS08260 SM00885 D5 N terminal like CPF12_RS08270 SM00487 DEAD-like helicases superfamily CPF12_RS08290 SM00345 helix_turn_helix gluconate operon transcriptional repressor CPF12_RS08290 SM00866 CPF12_RS08290 CPF12_RS08315 SM00357 Cold shock protein domain CPF12_RS08345 SM01133 CPF12_RS08345 CPF12_RS08360 SM00046 Diacylglycerol kinase catalytic domain (presumed) CPF12_RS08400 SM00850 LytTr DNA-binding domain CPF12_RS08410 SM00116 Domain in cystathionine beta-synthase and other proteins. CPF12_RS08425 SM00481 DNA polymerase alpha chain like domain CPF12_RS08470 SM01329 CPF12_RS08470 CPF12_RS08475 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CPF12_RS08475 SM00474 3'-5' exonuclease CPF12_RS08475 SM00475 5'-3' exonuclease CPF12_RS08475 SM00482 DNA polymerase A domain CPF12_RS08480 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CPF12_RS08480 SM01232 CPF12_RS08480 CPF12_RS08505 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CPF12_RS08545 SM00448 cheY-homologous receiver domain CPF12_RS08545 SM00862 Transcriptional regulatory protein, C terminal CPF12_RS08550 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CPF12_RS08550 SM00387 Histidine kinase-like ATPases CPF12_RS08550 SM00388 His Kinase A (phosphoacceptor) domain CPF12_RS08565 SM00382 ATPases associated with a variety of cellular activities CPF12_RS08665 SM00938 Nitrogen regulatory protein P-II CPF12_RS08670 SM01001 AIR carboxylase CPF12_RS08680 SM00998 Adenylosuccinate lyase C-terminus CPF12_RS08695 SM01211 CPF12_RS08695 CPF12_RS08720 SM00798 AICARFT/IMPCHase bienzyme CPF12_RS08720 SM00851 MGS-like domain CPF12_RS08725 SM01209 CPF12_RS08725 CPF12_RS08725 SM01210 CPF12_RS08725 CPF12_RS08740 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CPF12_RS08740 SM00292 breast cancer carboxy-terminal domain CPF12_RS08740 SM00532 Ligase N family CPF12_RS08760 SM00845 GatB domain CPF12_RS08765 SM00448 cheY-homologous receiver domain CPF12_RS08765 SM00862 Transcriptional regulatory protein, C terminal CPF12_RS08770 SM00387 Histidine kinase-like ATPases CPF12_RS08770 SM00388 His Kinase A (phosphoacceptor) domain CPF12_RS08830 SM00850 LytTr DNA-binding domain CPF12_RS08855 SM00984 UDP binding domain CPF12_RS08915 SM00363 S4 RNA-binding domain CPF12_RS08915 SM01390 CPF12_RS08915 CPF12_RS08935 SM00981 CPF12_RS08935 CPF12_RS08965 SM00382 ATPases associated with a variety of cellular activities CPF12_RS08975 SM00448 cheY-homologous receiver domain CPF12_RS08975 SM00862 Transcriptional regulatory protein, C terminal CPF12_RS08980 SM00387 Histidine kinase-like ATPases CPF12_RS08995 SM00487 DEAD-like helicases superfamily CPF12_RS08995 SM00490 helicase superfamily c-terminal domain CPF12_RS09010 SM00487 DEAD-like helicases superfamily CPF12_RS09010 SM00490 helicase superfamily c-terminal domain CPF12_RS09030 SM01005 Alanine racemase, C-terminal domain CPF12_RS09045 SM00331 Sigma factor PP2C-like phosphatases CPF12_RS09065 SM00316 Ribosomal protein S1-like RNA-binding domain CPF12_RS09065 SM00732 Likely ribonuclease with RNase H fold. CPF12_RS09070 SM00731 SprT homologues. CPF12_RS09125 SM00487 DEAD-like helicases superfamily CPF12_RS09125 SM00490 helicase superfamily c-terminal domain CPF12_RS09130 SM00829 Enoylreductase CPF12_RS09145 SM00883 Chaperonin 10 Kd subunit CPF12_RS09235 SM00861 Transketolase, pyrimidine binding domain CPF12_RS09240 SM00363 S4 RNA-binding domain CPF12_RS09260 SM01350 CPF12_RS09260 CPF12_RS09275 SM00729 Elongator protein 3, MiaB family, Radical SAM CPF12_RS09295 SM00271 DnaJ molecular chaperone homology domain CPF12_RS09335 SM00322 K homology RNA-binding domain CPF12_RS09340 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CPF12_RS09410 SM00363 S4 RNA-binding domain CPF12_RS09415 SM00448 cheY-homologous receiver domain CPF12_RS09415 SM00862 Transcriptional regulatory protein, C terminal CPF12_RS09420 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CPF12_RS09420 SM00387 Histidine kinase-like ATPases CPF12_RS09420 SM00388 His Kinase A (phosphoacceptor) domain CPF12_RS09440 SM00420 helix_turn_helix, Deoxyribose operon repressor CPF12_RS09445 SM00871 Bacterial transcription activator, effector binding domain CPF12_RS09455 SM00487 DEAD-like helicases superfamily CPF12_RS09455 SM00490 helicase superfamily c-terminal domain CPF12_RS09460 SM00257 Lysin motif CPF12_RS09470 SM00316 Ribosomal protein S1-like RNA-binding domain CPF12_RS09485 SM00411 bacterial (prokaryotic) histone like domain CPF12_RS09510 SM00562 CPF12_RS09510 CPF12_RS09565 SM00028 Tetratricopeptide repeats CPF12_RS09580 SM00382 ATPases associated with a variety of cellular activities CPF12_RS09605 SM00382 ATPases associated with a variety of cellular activities CPF12_RS09625 SM00028 Tetratricopeptide repeats CPF12_RS09630 SM00382 ATPases associated with a variety of cellular activities CPF12_RS09645 SM00347 helix_turn_helix multiple antibiotic resistance protein CPF12_RS09665 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CPF12_RS09665 SM00387 Histidine kinase-like ATPases CPF12_RS09665 SM00388 His Kinase A (phosphoacceptor) domain CPF12_RS09670 SM00448 cheY-homologous receiver domain CPF12_RS09670 SM00862 Transcriptional regulatory protein, C terminal CPF12_RS09675 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CPF12_RS09685 SM00732 Likely ribonuclease with RNase H fold. CPF12_RS09745 SM01103 CPF12_RS09745 CPF12_RS09755 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CPF12_RS09770 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CPF12_RS09780 SM00849 Metallo-beta-lactamase superfamily CPF12_RS09810 SM00838 Elongation factor G C-terminus CPF12_RS09815 SM00047 Lysozyme subfamily 2 CPF12_RS09875 SM00725 NEAr Transporter domain CPF12_RS09880 SM00725 NEAr Transporter domain CPF12_RS09915 SM00830 Chorismate mutase type II CPF12_RS09920 SM00354 helix_turn _helix lactose operon repressor CPF12_RS09975 SM00478 endonuclease III CPF12_RS09975 SM00525 CPF12_RS09975 CPF12_RS10310 SM01133 CPF12_RS10310 CPF12_RS10320 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CPF12_RS10325 SM00479 CPF12_RS10325 CPF12_RS10325 SM00487 DEAD-like helicases superfamily CPF12_RS10325 SM00491 CPF12_RS10325 CPF12_RS10350 SM00478 endonuclease III CPF12_RS10350 SM00525 CPF12_RS10350 CPF12_RS10365 SM01061 CAT RNA binding domain CPF12_RS10380 SM00382 ATPases associated with a variety of cellular activities CPF12_RS10385 SM00487 DEAD-like helicases superfamily CPF12_RS10385 SM00490 helicase superfamily c-terminal domain CPF12_RS10390 SM00518 AP endonuclease family 2 CPF12_RS10400 SM00382 ATPases associated with a variety of cellular activities CPF12_RS10435 SM00981 CPF12_RS10435 CPF12_RS10515 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CPF12_RS10515 SM00475 5'-3' exonuclease CPF12_RS10535 SM00357 Cold shock protein domain CPF12_RS10540 SM00529 Helix-turn-helix diphteria tox regulatory element CPF12_RS10555 SM00382 ATPases associated with a variety of cellular activities CPF12_RS10560 SM00932 Scaffold protein Nfu/NifU N terminal CPF12_RS10635 SM00382 ATPases associated with a variety of cellular activities CPF12_RS10665 SM00387 Histidine kinase-like ATPases CPF12_RS10665 SM00388 His Kinase A (phosphoacceptor) domain CPF12_RS10670 SM00448 cheY-homologous receiver domain CPF12_RS10670 SM00862 Transcriptional regulatory protein, C terminal CPF12_RS10675 SM00382 ATPases associated with a variety of cellular activities CPF12_RS10705 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CPF12_RS10705 SM00245 tail specific protease CPF12_RS10745 SM00861 Transketolase, pyrimidine binding domain CPF12_RS10870 SM00342 helix_turn_helix, arabinose operon control protein CPF12_RS10930 SM00450 Rhodanese Homology Domain CPF12_RS10960 SM00420 helix_turn_helix, Deoxyribose operon repressor CPF12_RS10960 SM01134 CPF12_RS10960 CPF12_RS11020 SM00257 Lysin motif CPF12_RS11030 SM00855 Phosphoglycerate mutase family CPF12_RS11065 SM00849 Metallo-beta-lactamase superfamily CPF12_RS11070 SM00822 CPF12_RS11070 CPF12_RS11100 SM00400 zinc finger CPF12_RS11100 SM00493 CPF12_RS11100 CPF12_RS11125 SM00382 ATPases associated with a variety of cellular activities CPF12_RS11130 SM01234 CPF12_RS11130 CPF12_RS11145 SM00986 Uracil DNA glycosylase superfamily CPF12_RS11145 SM00987 UreE urease accessory protein, C-terminal domain CPF12_RS11160 SM00829 Enoylreductase CPF12_RS11220 SM00382 ATPases associated with a variety of cellular activities CPF12_RS11235 SM00344 helix_turn_helix ASNC type CPF12_RS11245 SM00363 S4 RNA-binding domain CPF12_RS11270 SM00344 helix_turn_helix ASNC type CPF12_RS11275 SM00354 helix_turn _helix lactose operon repressor CPF12_RS11295 SM00849 Metallo-beta-lactamase superfamily CPF12_RS11305 SM00363 S4 RNA-binding domain CPF12_RS11330 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CPF12_RS11335 SM00851 MGS-like domain CPF12_RS11335 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CPF12_RS11335 SM01209 CPF12_RS11335 CPF12_RS11350 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CPF12_RS11370 SM00382 ATPases associated with a variety of cellular activities CPF12_RS11435 SM00072 Guanylate kinase homologues. CPF12_RS11440 SM01409 CPF12_RS11440 CPF12_RS11450 SM00487 DEAD-like helicases superfamily CPF12_RS11450 SM00490 helicase superfamily c-terminal domain CPF12_RS11465 SM00331 Sigma factor PP2C-like phosphatases CPF12_RS11465 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CPF12_RS11470 SM00220 Serine/Threonine protein kinases, catalytic domain CPF12_RS11470 SM00740 CPF12_RS11470 CPF12_RS11485 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain CPF12_RS11490 SM00534 ATPase domain of DNA mismatch repair MUTS family CPF12_RS11505 SM01120 CPF12_RS11505 CPF12_RS11505 SM01121 CPF12_RS11505 CPF12_RS11510 SM00487 DEAD-like helicases superfamily CPF12_RS11510 SM00490 helicase superfamily c-terminal domain CPF12_RS11525 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CPF12_RS11530 SM00822 CPF12_RS11530 CPF12_RS11540 SM00358 Double-stranded RNA binding motif CPF12_RS11540 SM00535 Ribonuclease III family CPF12_RS11545 SM00968 SMC proteins Flexible Hinge Domain CPF12_RS11550 SM00382 ATPases associated with a variety of cellular activities CPF12_RS11550 SM00962 SRP54-type protein, GTPase domain CPF12_RS11550 SM00963 SRP54-type protein, helical bundle domain CPF12_RS11555 SM00382 ATPases associated with a variety of cellular activities CPF12_RS11590 SM00100 Cyclic nucleotide-monophosphate binding domain CPF12_RS11620 SM00382 ATPases associated with a variety of cellular activities CPF12_RS11620 SM00962 SRP54-type protein, GTPase domain CPF12_RS11620 SM00963 SRP54-type protein, helical bundle domain CPF12_RS11660 SM00448 cheY-homologous receiver domain CPF12_RS11660 SM00850 LytTr DNA-binding domain CPF12_RS11665 SM00387 Histidine kinase-like ATPases CPF12_RS11670 SM01260 CPF12_RS11670 CPF12_RS11675 SM00382 ATPases associated with a variety of cellular activities CPF12_RS11680 SM00382 ATPases associated with a variety of cellular activities CPF12_RS11740 SM00448 cheY-homologous receiver domain CPF12_RS11740 SM00862 Transcriptional regulatory protein, C terminal CPF12_RS11745 SM00387 Histidine kinase-like ATPases CPF12_RS11745 SM00388 His Kinase A (phosphoacceptor) domain CPF12_RS11810 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CPF12_RS11810 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CPF12_RS11810 SM00493 CPF12_RS11810 CPF12_RS11835 SM01207 CPF12_RS11835 CPF12_RS11840 SM00387 Histidine kinase-like ATPases CPF12_RS11840 SM00433 TopoisomeraseII CPF12_RS11845 SM00434 DNA Topoisomerase IV CPF12_RS11860 SM00422 helix_turn_helix, mercury resistance CPF12_RS11865 SM01230 CPF12_RS11865 CPF12_RS11900 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CPF12_RS11900 SM00534 ATPase domain of DNA mismatch repair MUTS family CPF12_RS11905 SM00853 MutL C terminal dimerisation domain CPF12_RS11905 SM01340 CPF12_RS11905 CPF12_RS11910 SM00448 cheY-homologous receiver domain CPF12_RS11910 SM00862 Transcriptional regulatory protein, C terminal CPF12_RS11915 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CPF12_RS11915 SM00387 Histidine kinase-like ATPases CPF12_RS11915 SM00388 His Kinase A (phosphoacceptor) domain CPF12_RS11920 SM00382 ATPases associated with a variety of cellular activities CPF12_RS11925 SM00382 ATPases associated with a variety of cellular activities CPF12_RS11935 SM00422 helix_turn_helix, mercury resistance CPF12_RS11950 SM00382 ATPases associated with a variety of cellular activities CPF12_RS11960 SM00382 ATPases associated with a variety of cellular activities CPF12_RS11975 SM00448 cheY-homologous receiver domain CPF12_RS11975 SM00850 LytTr DNA-binding domain CPF12_RS11985 SM00478 endonuclease III CPF12_RS11990 SM00478 endonuclease III CPF12_RS12005 SM00345 helix_turn_helix gluconate operon transcriptional repressor CPF12_RS12055 SM00857 Resolvase, N terminal domain CPF12_RS12070 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CPF12_RS12070 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CPF12_RS12095 SM00062 Bacterial periplasmic substrate-binding proteins CPF12_RS12095 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CPF12_RS12100 SM00382 ATPases associated with a variety of cellular activities CPF12_RS12105 SM00382 ATPases associated with a variety of cellular activities CPF12_RS12115 SM00849 Metallo-beta-lactamase superfamily CPF12_RS12120 SM01130 CPF12_RS12120 CPF12_RS12130 SM00859 Semialdehyde dehydrogenase, NAD binding domain CPF12_RS12135 SM00345 helix_turn_helix gluconate operon transcriptional repressor CPF12_RS12155 SM00316 Ribosomal protein S1-like RNA-binding domain CPF12_RS12155 SM00322 K homology RNA-binding domain CPF12_RS12160 SM01387 CPF12_RS12160 CPF12_RS12165 SM00904 Riboflavin kinase CPF12_RS12195 SM00316 Ribosomal protein S1-like RNA-binding domain CPF12_RS12195 SM00322 K homology RNA-binding domain CPF12_RS12225 SM00479 CPF12_RS12225 CPF12_RS12225 SM00481 DNA polymerase alpha chain like domain CPF12_RS12235 SM00382 ATPases associated with a variety of cellular activities CPF12_RS12360 SM00487 DEAD-like helicases superfamily CPF12_RS12360 SM00490 helicase superfamily c-terminal domain CPF12_RS12385 SM00563 Phosphate acyltransferases CPF12_RS12410 SM00382 ATPases associated with a variety of cellular activities CPF12_RS12415 SM00382 ATPases associated with a variety of cellular activities CPF12_RS12430 SM00861 Transketolase, pyrimidine binding domain CPF12_RS12460 SM01004 Delta-aminolevulinic acid dehydratase