locus-tag class description DA85_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix DA85_RS00005 PF00308 Bacterial dnaA protein DA85_RS00005 PF11638 DnaA N-terminal domain DA85_RS00010 PF02767 DNA polymerase III beta subunit, central domain DA85_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain DA85_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain DA85_RS00015 PF02463 RecF/RecN/SMC N terminal domain DA85_RS00020 PF00581 Rhodanese-like domain DA85_RS00020 PF00899 ThiF family DA85_RS00025 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DA85_RS00030 PF00005 ABC transporter DA85_RS00030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DA85_RS00035 PF12911 N-terminal TM domain of oligopeptide transport permease C DA85_RS00035 PF00528 Binding-protein-dependent transport system inner membrane component DA85_RS00040 PF00528 Binding-protein-dependent transport system inner membrane component DA85_RS00045 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DA85_RS00050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DA85_RS00065 PF13458 Periplasmic binding protein DA85_RS00070 PF00378 Enoyl-CoA hydratase/isomerase DA85_RS00075 PF00682 HMGL-like DA85_RS00080 PF00289 Biotin carboxylase, N-terminal domain DA85_RS00080 PF00364 Biotin-requiring enzyme DA85_RS00080 PF02785 Biotin carboxylase C-terminal domain DA85_RS00080 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DA85_RS00085 PF01039 Carboxyl transferase domain DA85_RS00090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DA85_RS00090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DA85_RS00090 PF02770 Acyl-CoA dehydrogenase, middle domain DA85_RS00095 PF00501 AMP-binding enzyme DA85_RS00095 PF13193 AMP-binding enzyme C-terminal domain DA85_RS00120 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DA85_RS00125 PF02224 Cytidylate kinase DA85_RS00130 PF00575 S1 RNA binding domain DA85_RS00135 PF03601 Conserved hypothetical protein 698 DA85_RS00140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA85_RS00140 PF03466 LysR substrate binding domain DA85_RS00150 PF13406 Transglycosylase SLT domain DA85_RS00155 PF02132 RecR protein DA85_RS00155 PF13662 Toprim domain DA85_RS00160 PF02575 YbaB/EbfC DNA-binding family DA85_RS00165 PF12170 DNA polymerase III tau subunit V interacting with alpha DA85_RS00165 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding DA85_RS00165 PF12169 DNA polymerase III subunits gamma and tau domain III DA85_RS00175 PF09297 NADH pyrophosphatase zinc ribbon domain DA85_RS00175 PF00293 NUDIX domain DA85_RS00180 PF00800 Prephenate dehydratase DA85_RS00180 PF01817 Chorismate mutase type II DA85_RS00185 PF02348 Cytidylyltransferase DA85_RS00190 PF00034 Cytochrome c DA85_RS00200 PF06481 COX Aromatic Rich Motif DA85_RS00200 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DA85_RS00205 PF00115 Cytochrome C and Quinol oxidase polypeptide I DA85_RS00210 PF00510 Cytochrome c oxidase subunit III DA85_RS00215 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DA85_RS00235 PF17969 L,D-transpeptidase C-terminal domain DA85_RS00235 PF03734 L,D-transpeptidase catalytic domain DA85_RS00260 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DA85_RS00265 PF01883 Iron-sulfur cluster assembly protein DA85_RS00265 PF10609 NUBPL iron-transfer P-loop NTPase DA85_RS00270 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DA85_RS00270 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DA85_RS00270 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DA85_RS00270 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DA85_RS00275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA85_RS00275 PF03466 LysR substrate binding domain DA85_RS00280 PF12146 Serine aminopeptidase, S33 DA85_RS00290 PF01557 Fumarylacetoacetate (FAA) hydrolase family DA85_RS00315 PF03006 Haemolysin-III related DA85_RS00320 PF14579 Helix-hairpin-helix motif DA85_RS00320 PF02811 PHP domain DA85_RS00320 PF01336 OB-fold nucleic acid binding domain DA85_RS00320 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DA85_RS00320 PF07733 Bacterial DNA polymerase III alpha NTPase domain DA85_RS00325 PF02811 PHP domain DA85_RS00325 PF14579 Helix-hairpin-helix motif DA85_RS00325 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DA85_RS00325 PF07733 Bacterial DNA polymerase III alpha NTPase domain DA85_RS00325 PF01336 OB-fold nucleic acid binding domain DA85_RS00340 PF03895 YadA-like membrane anchor domain DA85_RS00340 PF05658 Head domain of trimeric autotransporter adhesin DA85_RS00340 PF05662 Coiled stalk of trimeric autotransporter adhesin DA85_RS00350 PF00764 Arginosuccinate synthase DA85_RS00365 PF04055 Radical SAM superfamily DA85_RS00380 PF06803 Protein of unknown function (DUF1232) DA85_RS00385 PF01329 Pterin 4 alpha carbinolamine dehydratase DA85_RS00395 PF02834 LigT like Phosphoesterase DA85_RS00400 PF13472 GDSL-like Lipase/Acylhydrolase family DA85_RS00405 PF00005 ABC transporter DA85_RS00415 PF01027 Inhibitor of apoptosis-promoting Bax1 DA85_RS00435 PF00330 Aconitase family (aconitate hydratase) DA85_RS00435 PF00694 Aconitase C-terminal domain DA85_RS00440 PF00005 ABC transporter DA85_RS00445 PF03379 CcmB protein DA85_RS00450 PF01578 Cytochrome C assembly protein DA85_RS00460 PF08534 Redoxin DA85_RS00465 PF00920 Dehydratase family DA85_RS00475 PF00072 Response regulator receiver domain DA85_RS00475 PF00486 Transcriptional regulatory protein, C terminal DA85_RS00505 PF00528 Binding-protein-dependent transport system inner membrane component DA85_RS00510 PF00528 Binding-protein-dependent transport system inner membrane component DA85_RS00515 PF00005 ABC transporter DA85_RS00515 PF12857 TOBE-like domain DA85_RS00520 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain DA85_RS00520 PF06165 Glycosyltransferase family 36 DA85_RS00520 PF10091 Putative glucoamylase DA85_RS00525 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DA85_RS00525 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DA85_RS00530 PF02567 Phenazine biosynthesis-like protein DA85_RS00535 PF08241 Methyltransferase domain DA85_RS00540 PF00294 pfkB family carbohydrate kinase DA85_RS00550 PF00912 Transglycosylase DA85_RS00550 PF00905 Penicillin binding protein transpeptidase domain DA85_RS00555 PF13505 Outer membrane protein beta-barrel domain DA85_RS00560 PF13505 Outer membrane protein beta-barrel domain DA85_RS00565 PF01612 3'-5' exonuclease DA85_RS00565 PF00476 DNA polymerase family A DA85_RS00570 PF01546 Peptidase family M20/M25/M40 DA85_RS00570 PF07687 Peptidase dimerisation domain DA85_RS00575 PF01367 5'-3' exonuclease, C-terminal SAM fold DA85_RS00575 PF01612 3'-5' exonuclease DA85_RS00575 PF00476 DNA polymerase family A DA85_RS00575 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DA85_RS00580 PF00271 Helicase conserved C-terminal domain DA85_RS00580 PF00270 DEAD/DEAH box helicase DA85_RS00585 PF00204 DNA gyrase B DA85_RS00585 PF00986 DNA gyrase B subunit, carboxyl terminus DA85_RS00585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA85_RS00585 PF01751 Toprim domain DA85_RS00590 PF00756 Putative esterase DA85_RS00600 PF13673 Acetyltransferase (GNAT) domain DA85_RS00605 PF08240 Alcohol dehydrogenase GroES-like domain DA85_RS00605 PF00107 Zinc-binding dehydrogenase DA85_RS00610 PF02583 Metal-sensitive transcriptional repressor DA85_RS00615 PF00271 Helicase conserved C-terminal domain DA85_RS00615 PF08482 ATP-dependent helicase C-terminal DA85_RS00615 PF04408 Helicase associated domain (HA2) DA85_RS00615 PF00270 DEAD/DEAH box helicase DA85_RS00620 PF08482 ATP-dependent helicase C-terminal DA85_RS00620 PF00270 DEAD/DEAH box helicase DA85_RS00620 PF04408 Helicase associated domain (HA2) DA85_RS00620 PF00271 Helicase conserved C-terminal domain DA85_RS00625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA85_RS00625 PF00512 His Kinase A (phospho-acceptor) domain DA85_RS00630 PF13340 Putative transposase of IS4/5 family (DUF4096) DA85_RS00635 PF01609 Transposase DDE domain DA85_RS00640 PF00072 Response regulator receiver domain DA85_RS00650 PF03734 L,D-transpeptidase catalytic domain DA85_RS00650 PF17969 L,D-transpeptidase C-terminal domain DA85_RS00650 PF01476 LysM domain DA85_RS00655 PF01106 NifU-like domain DA85_RS00665 PF00579 tRNA synthetases class I (W and Y) DA85_RS00670 PF03023 Lipid II flippase MurJ DA85_RS00675 PF01966 HD domain DA85_RS00675 PF08335 GlnD PII-uridylyltransferase DA85_RS00675 PF01842 ACT domain DA85_RS00680 PF03949 Malic enzyme, NAD binding domain DA85_RS00680 PF01515 Phosphate acetyl/butaryl transferase DA85_RS00680 PF00390 Malic enzyme, N-terminal domain DA85_RS00690 PF00488 MutS domain V DA85_RS00690 PF05190 MutS family domain IV DA85_RS00690 PF05192 MutS domain III DA85_RS00690 PF05188 MutS domain II DA85_RS00690 PF01624 MutS domain I DA85_RS00700 PF01252 Signal peptidase (SPase) II DA85_RS00705 PF08032 RNA 2'-O ribose methyltransferase substrate binding DA85_RS00705 PF00588 SpoU rRNA Methylase family DA85_RS00710 PF02926 THUMP domain DA85_RS00710 PF10672 S-adenosylmethionine-dependent methyltransferase DA85_RS00710 PF01170 Putative RNA methylase family UPF0020 DA85_RS00720 PF00216 Bacterial DNA-binding protein DA85_RS00725 PF01343 Peptidase family S49 DA85_RS00735 PF03968 OstA-like protein DA85_RS00740 PF00005 ABC transporter DA85_RS00745 PF04552 Sigma-54, DNA binding domain DA85_RS00745 PF04963 Sigma-54 factor, core binding domain DA85_RS00745 PF00309 Sigma-54 factor, Activator interacting domain (AID) DA85_RS00750 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DA85_RS00750 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DA85_RS00755 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DA85_RS00765 PF00011 Hsp20/alpha crystallin family DA85_RS00775 PF10576 Iron-sulfur binding domain of endonuclease III DA85_RS00775 PF00633 Helix-hairpin-helix motif DA85_RS00775 PF00730 HhH-GPD superfamily base excision DNA repair protein DA85_RS00785 PF00294 pfkB family carbohydrate kinase DA85_RS00790 PF03458 UPF0126 domain DA85_RS00795 PF01025 GrpE DA85_RS00800 PF01628 HrcA protein C terminal domain DA85_RS00805 PF01138 3' exoribonuclease family, domain 1 DA85_RS00805 PF03725 3' exoribonuclease family, domain 2 DA85_RS00815 PF01725 Ham1 family DA85_RS00820 PF06969 HemN C-terminal domain DA85_RS00820 PF04055 Radical SAM superfamily DA85_RS00825 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DA85_RS00830 PF02021 Uncharacterised protein family UPF0102 DA85_RS00835 PF14824 Sirohaem biosynthesis protein central DA85_RS00835 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DA85_RS00835 PF10414 Sirohaem synthase dimerisation region DA85_RS00845 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DA85_RS00845 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DA85_RS00850 PF01507 Phosphoadenosine phosphosulfate reductase family DA85_RS00865 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DA85_RS00875 PF07886 BA14K-like protein DA85_RS00880 PF02574 Homocysteine S-methyltransferase DA85_RS00880 PF02607 B12 binding domain DA85_RS00880 PF02310 B12 binding domain DA85_RS00880 PF02965 Vitamin B12 dependent methionine synthase, activation domain DA85_RS00880 PF00809 Pterin binding enzyme DA85_RS00885 PF00196 Bacterial regulatory proteins, luxR family DA85_RS00885 PF03472 Autoinducer binding domain DA85_RS00890 PF00202 Aminotransferase class-III DA85_RS00895 PF01507 Phosphoadenosine phosphosulfate reductase family DA85_RS00900 PF00009 Elongation factor Tu GTP binding domain DA85_RS00905 PF00459 Inositol monophosphatase family DA85_RS00920 PF00072 Response regulator receiver domain DA85_RS00920 PF00196 Bacterial regulatory proteins, luxR family DA85_RS00930 PF00455 DeoR C terminal sensor domain DA85_RS00930 PF08220 DeoR-like helix-turn-helix domain DA85_RS00935 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DA85_RS00935 PF01266 FAD dependent oxidoreductase DA85_RS00945 PF00171 Aldehyde dehydrogenase family DA85_RS00950 PF08240 Alcohol dehydrogenase GroES-like domain DA85_RS00950 PF00107 Zinc-binding dehydrogenase DA85_RS00975 PF00171 Aldehyde dehydrogenase family DA85_RS00980 PF00528 Binding-protein-dependent transport system inner membrane component DA85_RS00985 PF03070 TENA/THI-4/PQQC family DA85_RS00990 PF09084 NMT1/THI5 like DA85_RS00995 PF02581 Thiamine monophosphate synthase DA85_RS01000 PF05690 Thiazole biosynthesis protein ThiG DA85_RS01010 PF01266 FAD dependent oxidoreductase DA85_RS01015 PF08543 Phosphomethylpyrimidine kinase DA85_RS01020 PF00563 EAL domain DA85_RS01020 PF08448 PAS fold DA85_RS01020 PF08447 PAS fold DA85_RS01020 PF00990 Diguanylate cyclase, GGDEF domain DA85_RS01025 PF00403 Heavy-metal-associated domain DA85_RS01030 PF09278 MerR, DNA binding DA85_RS01030 PF00376 MerR family regulatory protein DA85_RS01035 PF00528 Binding-protein-dependent transport system inner membrane component DA85_RS01040 PF00005 ABC transporter DA85_RS01045 PF00528 Binding-protein-dependent transport system inner membrane component DA85_RS01050 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DA85_RS01060 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DA85_RS01060 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DA85_RS01065 PF01266 FAD dependent oxidoreductase DA85_RS01070 PF04267 Sarcosine oxidase, delta subunit family DA85_RS01075 PF01571 Aminomethyltransferase folate-binding domain DA85_RS01075 PF08669 Glycine cleavage T-protein C-terminal barrel domain DA85_RS01075 PF17806 Sarcosine oxidase A3 domain DA85_RS01075 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA85_RS01090 PF09339 IclR helix-turn-helix domain DA85_RS01090 PF01614 Bacterial transcriptional regulator DA85_RS01100 PF00528 Binding-protein-dependent transport system inner membrane component DA85_RS01105 PF00528 Binding-protein-dependent transport system inner membrane component DA85_RS01110 PF00005 ABC transporter DA85_RS01110 PF17912 MalK OB fold domain DA85_RS01110 PF03459 TOBE domain DA85_RS01115 PF13378 Enolase C-terminal domain-like DA85_RS01115 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DA85_RS01120 PF05336 L-rhamnose mutarotase DA85_RS01140 PF01557 Fumarylacetoacetate (FAA) hydrolase family DA85_RS01145 PF13378 Enolase C-terminal domain-like DA85_RS01145 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DA85_RS01170 PF03884 DNA gyrase inhibitor YacG DA85_RS01175 PF02545 Maf-like protein DA85_RS01180 PF01176 Translation initiation factor 1A / IF-1 DA85_RS01185 PF01451 Low molecular weight phosphotyrosine protein phosphatase DA85_RS01190 PF06793 Uncharacterised protein family (UPF0262) DA85_RS01195 PF00815 Histidinol dehydrogenase DA85_RS01205 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DA85_RS01225 PF02498 BRO family, N-terminal domain DA85_RS01225 PF10548 P22AR C-terminal domain DA85_RS01230 PF02796 Helix-turn-helix domain of resolvase DA85_RS01230 PF00239 Resolvase, N terminal domain DA85_RS01255 PF01774 UreD urease accessory protein DA85_RS01260 PF00547 Urease, gamma subunit DA85_RS01270 PF00699 Urease beta subunit DA85_RS01275 PF01979 Amidohydrolase family DA85_RS01275 PF00449 Urease alpha-subunit, N-terminal domain DA85_RS01280 PF02814 UreE urease accessory protein, N-terminal domain DA85_RS01280 PF05194 UreE urease accessory protein, C-terminal domain DA85_RS01285 PF01730 UreF DA85_RS01290 PF02492 CobW/HypB/UreG, nucleotide-binding domain DA85_RS01300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA85_RS01300 PF00512 His Kinase A (phospho-acceptor) domain DA85_RS01305 PF13533 Biotin-lipoyl like DA85_RS01310 PF00873 AcrB/AcrD/AcrF family DA85_RS01315 PF01979 Amidohydrolase family DA85_RS01320 PF01546 Peptidase family M20/M25/M40 DA85_RS01320 PF07687 Peptidase dimerisation domain DA85_RS01325 PF08362 YcdC-like protein, C-terminal region DA85_RS01325 PF00440 Bacterial regulatory proteins, tetR family DA85_RS01330 PF00293 NUDIX domain DA85_RS01335 PF01180 Dihydroorotate dehydrogenase DA85_RS01340 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DA85_RS01340 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA85_RS01350 PF00342 Phosphoglucose isomerase DA85_RS01360 PF13419 Haloacid dehalogenase-like hydrolase DA85_RS01370 PF13193 AMP-binding enzyme C-terminal domain DA85_RS01370 PF00501 AMP-binding enzyme DA85_RS01375 PF08361 MAATS-type transcriptional repressor, C-terminal region DA85_RS01375 PF00440 Bacterial regulatory proteins, tetR family DA85_RS01380 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DA85_RS01385 PF00873 AcrB/AcrD/AcrF family DA85_RS01395 PF00497 Bacterial extracellular solute-binding proteins, family 3 DA85_RS01405 PF03976 Polyphosphate kinase 2 (PPK2) DA85_RS01410 PF00989 PAS fold DA85_RS01410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA85_RS01410 PF00512 His Kinase A (phospho-acceptor) domain DA85_RS01410 PF16736 Single Cache-like DA85_RS01420 PF00202 Aminotransferase class-III DA85_RS01425 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DA85_RS01425 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DA85_RS01430 PF01430 Hsp33 protein DA85_RS01435 PF04379 ApaG domain DA85_RS01440 PF01053 Cys/Met metabolism PLP-dependent enzyme DA85_RS01450 PF00692 dUTPase DA85_RS01455 PF01965 DJ-1/PfpI family DA85_RS01455 PF12833 Helix-turn-helix domain DA85_RS01470 PF01554 MatE DA85_RS01475 PF01180 Dihydroorotate dehydrogenase DA85_RS01490 PF00561 alpha/beta hydrolase fold DA85_RS01495 PF00072 Response regulator receiver domain DA85_RS01495 PF00196 Bacterial regulatory proteins, luxR family DA85_RS01500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA85_RS01500 PF00512 His Kinase A (phospho-acceptor) domain DA85_RS01500 PF01627 Hpt domain DA85_RS01500 PF00072 Response regulator receiver domain DA85_RS01500 PF00672 HAMP domain DA85_RS01505 PF01741 Large-conductance mechanosensitive channel, MscL DA85_RS01510 PF00155 Aminotransferase class I and II DA85_RS01535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA85_RS01535 PF03466 LysR substrate binding domain DA85_RS01540 PF03788 LrgA family DA85_RS01545 PF04172 LrgB-like family DA85_RS01555 PF02569 Pantoate-beta-alanine ligase DA85_RS01560 PF02548 Ketopantoate hydroxymethyltransferase DA85_RS01565 PF00175 Oxidoreductase NAD-binding domain DA85_RS01565 PF00970 Oxidoreductase FAD-binding domain DA85_RS01570 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DA85_RS01575 PF03435 Saccharopine dehydrogenase NADP binding domain DA85_RS01575 PF16653 Saccharopine dehydrogenase C-terminal domain DA85_RS01580 PF05544 Proline racemase DA85_RS01585 PF01554 MatE DA85_RS01590 PF06776 Invasion associated locus B (IalB) protein DA85_RS01600 PF00196 Bacterial regulatory proteins, luxR family DA85_RS01600 PF00072 Response regulator receiver domain DA85_RS01610 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DA85_RS01615 PF03480 Bacterial extracellular solute-binding protein, family 7 DA85_RS01620 PF07883 Cupin domain DA85_RS01620 PF05899 Protein of unknown function (DUF861) DA85_RS01625 PF01014 Uricase DA85_RS01625 PF09349 OHCU decarboxylase DA85_RS01635 PF01799 [2Fe-2S] binding domain DA85_RS01635 PF00111 2Fe-2S iron-sulfur cluster binding domain DA85_RS01640 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DA85_RS01640 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DA85_RS01650 PF03466 LysR substrate binding domain DA85_RS01650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA85_RS01660 PF01979 Amidohydrolase family DA85_RS01665 PF13660 Domain of unknown function (DUF4147) DA85_RS01665 PF05161 MOFRL family DA85_RS01670 PF03597 Cytochrome oxidase maturation protein cbb3-type DA85_RS01680 PF05751 FixH DA85_RS01685 PF13746 4Fe-4S dicluster domain DA85_RS01685 PF12801 4Fe-4S binding domain DA85_RS01685 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase DA85_RS01690 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DA85_RS01690 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP DA85_RS01705 PF00115 Cytochrome C and Quinol oxidase polypeptide I DA85_RS01715 PF06965 Na+/H+ antiporter 1 DA85_RS01715 PF13462 Thioredoxin DA85_RS01720 PF00171 Aldehyde dehydrogenase family DA85_RS01725 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DA85_RS01725 PF12833 Helix-turn-helix domain DA85_RS01725 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DA85_RS01725 PF02805 Metal binding domain of Ada DA85_RS01730 PF03960 ArsC family DA85_RS01740 PF06779 Uncharacterised MFS-type transporter YbfB DA85_RS01750 PF05992 SbmA/BacA-like family DA85_RS01765 PF01926 50S ribosome-binding GTPase DA85_RS01765 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DA85_RS01770 PF00012 Hsp70 protein DA85_RS01775 PF07486 Cell Wall Hydrolase DA85_RS01785 PF00119 ATP synthase A chain DA85_RS01790 PF00137 ATP synthase subunit C DA85_RS01795 PF00430 ATP synthase B/B' CF(0) DA85_RS01800 PF00430 ATP synthase B/B' CF(0) DA85_RS01805 PF01351 Ribonuclease HII DA85_RS01810 PF04055 Radical SAM superfamily DA85_RS01830 PF00288 GHMP kinases N terminal domain DA85_RS01830 PF08544 GHMP kinases C terminal DA85_RS01840 PF01343 Peptidase family S49 DA85_RS01840 PF06965 Na+/H+ antiporter 1 DA85_RS01845 PF06965 Na+/H+ antiporter 1 DA85_RS01860 PF00348 Polyprenyl synthetase DA85_RS01870 PF02091 Glycyl-tRNA synthetase alpha subunit DA85_RS01875 PF02092 Glycyl-tRNA synthetase beta subunit DA85_RS01875 PF05746 DALR anticodon binding domain DA85_RS01880 PF02092 Glycyl-tRNA synthetase beta subunit DA85_RS01880 PF05746 DALR anticodon binding domain DA85_RS01885 PF03481 Putative GTP-binding controlling metal-binding DA85_RS01885 PF01300 Telomere recombination DA85_RS01890 PF01565 FAD binding domain DA85_RS01890 PF02913 FAD linked oxidases, C-terminal domain DA85_RS01915 PF02770 Acyl-CoA dehydrogenase, middle domain DA85_RS01915 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DA85_RS01915 PF12806 Acetyl-CoA dehydrogenase C-terminal like DA85_RS01915 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DA85_RS01920 PF17151 Periplasmic sensor domain DA85_RS01920 PF00990 Diguanylate cyclase, GGDEF domain DA85_RS01925 PF02844 Phosphoribosylglycinamide synthetase, N domain DA85_RS01925 PF02843 Phosphoribosylglycinamide synthetase, C domain DA85_RS01925 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DA85_RS01930 PF01040 UbiA prenyltransferase family DA85_RS01935 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DA85_RS01935 PF01243 Pyridoxamine 5'-phosphate oxidase DA85_RS01945 PF01556 DnaJ C terminal domain DA85_RS01945 PF00684 DnaJ central domain DA85_RS01945 PF00226 DnaJ domain DA85_RS01960 PF00313 'Cold-shock' DNA-binding domain DA85_RS01985 PF01264 Chorismate synthase DA85_RS01990 PF00925 GTP cyclohydrolase II DA85_RS01990 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DA85_RS01995 PF00850 Histone deacetylase domain DA85_RS02000 PF02609 Exonuclease VII small subunit DA85_RS02010 PF04226 Transglycosylase associated protein DA85_RS02020 PF05726 Pirin C-terminal cupin domain DA85_RS02020 PF02678 Pirin DA85_RS02025 PF02780 Transketolase, C-terminal domain DA85_RS02025 PF02779 Transketolase, pyrimidine binding domain DA85_RS02025 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DA85_RS02030 PF01479 S4 domain DA85_RS02030 PF01728 FtsJ-like methyltransferase DA85_RS02035 PF05958 tRNA (Uracil-5-)-methyltransferase DA85_RS02040 PF03641 Possible lysine decarboxylase DA85_RS02045 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme DA85_RS02055 PF00664 ABC transporter transmembrane region DA85_RS02055 PF00005 ABC transporter DA85_RS02060 PF02666 Phosphatidylserine decarboxylase DA85_RS02065 PF01066 CDP-alcohol phosphatidyltransferase DA85_RS02070 PF00106 short chain dehydrogenase DA85_RS02075 PF13537 Glutamine amidotransferase domain DA85_RS02075 PF00156 Phosphoribosyl transferase domain DA85_RS02085 PF06745 KaiC DA85_RS02085 PF18073 Rubredoxin metal binding domain DA85_RS02090 PF00772 DnaB-like helicase N terminal domain DA85_RS02090 PF03796 DnaB-like helicase C terminal domain DA85_RS02100 PF03948 Ribosomal protein L9, C-terminal domain DA85_RS02100 PF01281 Ribosomal protein L9, N-terminal domain DA85_RS02110 PF01084 Ribosomal protein S18 DA85_RS02115 PF01250 Ribosomal protein S6 DA85_RS02120 PF00698 Acyl transferase domain DA85_RS02130 PF00550 Phosphopantetheine attachment site DA85_RS02135 PF00109 Beta-ketoacyl synthase, N-terminal domain DA85_RS02135 PF02801 Beta-ketoacyl synthase, C-terminal domain DA85_RS02140 PF02618 YceG-like family DA85_RS02145 PF03755 YicC-like family, N-terminal region DA85_RS02145 PF08340 Domain of unknown function (DUF1732) DA85_RS02150 PF00625 Guanylate kinase DA85_RS02155 PF01523 Putative modulator of DNA gyrase DA85_RS02165 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DA85_RS02165 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DA85_RS02170 PF00115 Cytochrome C and Quinol oxidase polypeptide I DA85_RS02175 PF01040 UbiA prenyltransferase family DA85_RS02185 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 DA85_RS02190 PF00510 Cytochrome c oxidase subunit III DA85_RS02200 PF02104 SURF1 family DA85_RS02205 PF02401 LytB protein DA85_RS02210 PF01636 Phosphotransferase enzyme family DA85_RS02215 PF00075 RNase H DA85_RS02220 PF00462 Glutaredoxin DA85_RS02220 PF08534 Redoxin DA85_RS02230 PF02622 Uncharacterized ACR, COG1678 DA85_RS02235 PF03707 Bacterial signalling protein N terminal repeat DA85_RS02235 PF00990 Diguanylate cyclase, GGDEF domain DA85_RS02235 PF00563 EAL domain DA85_RS02240 PF13302 Acetyltransferase (GNAT) domain DA85_RS02245 PF00675 Insulinase (Peptidase family M16) DA85_RS02245 PF05193 Peptidase M16 inactive domain DA85_RS02250 PF14821 Threonine synthase N terminus DA85_RS02250 PF00291 Pyridoxal-phosphate dependent enzyme DA85_RS02260 PF12792 CSS motif domain associated with EAL DA85_RS02260 PF00563 EAL domain DA85_RS02270 PF13419 Haloacid dehalogenase-like hydrolase DA85_RS02275 PF00654 Voltage gated chloride channel DA85_RS02280 PF01555 DNA methylase DA85_RS02280 PF18755 Restriction Enzyme Adenine Methylase Associated DA85_RS02290 PF00730 HhH-GPD superfamily base excision DNA repair protein DA85_RS02290 PF14815 NUDIX domain DA85_RS02305 PF02463 RecF/RecN/SMC N terminal domain DA85_RS02310 PF01545 Cation efflux family DA85_RS02320 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DA85_RS02320 PF02896 PEP-utilising enzyme, TIM barrel domain DA85_RS02320 PF00391 PEP-utilising enzyme, mobile domain DA85_RS02345 PF02632 BioY family DA85_RS02350 PF04115 Ureidoglycolate lyase DA85_RS02355 PF00576 HIUase/Transthyretin family DA85_RS02365 PF02719 Polysaccharide biosynthesis protein DA85_RS02370 PF00953 Glycosyl transferase family 4 DA85_RS02400 PF13276 HTH-like domain DA85_RS02400 PF13683 Integrase core domain DA85_RS02405 PF02911 Formyl transferase, C-terminal domain DA85_RS02405 PF01370 NAD dependent epimerase/dehydratase family DA85_RS02405 PF00551 Formyl transferase DA85_RS02415 PF00005 ABC transporter DA85_RS02415 PF14524 Wzt C-terminal domain DA85_RS02425 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DA85_RS02430 PF16363 GDP-mannose 4,6 dehydratase DA85_RS02435 PF13340 Putative transposase of IS4/5 family (DUF4096) DA85_RS02445 PF13340 Putative transposase of IS4/5 family (DUF4096) DA85_RS02455 PF13340 Putative transposase of IS4/5 family (DUF4096) DA85_RS02465 PF13333 Integrase core domain DA85_RS02465 PF00665 Integrase core domain DA85_RS02465 PF13276 HTH-like domain DA85_RS02475 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DA85_RS02475 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DA85_RS02475 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DA85_RS02475 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DA85_RS02480 PF00483 Nucleotidyl transferase DA85_RS02480 PF01050 Mannose-6-phosphate isomerase DA85_RS02490 PF00534 Glycosyl transferases group 1 DA85_RS02490 PF13439 Glycosyltransferase Family 4 DA85_RS02495 PF00005 ABC transporter DA85_RS02500 PF02653 Branched-chain amino acid transport system / permease component DA85_RS02505 PF13407 Periplasmic binding protein domain DA85_RS02515 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DA85_RS02515 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DA85_RS02520 PF01261 Xylose isomerase-like TIM barrel DA85_RS02525 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DA85_RS02525 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DA85_RS02530 PF00356 Bacterial regulatory proteins, lacI family DA85_RS02540 PF00171 Aldehyde dehydrogenase family DA85_RS02545 PF00732 GMC oxidoreductase DA85_RS02545 PF05199 GMC oxidoreductase DA85_RS02550 PF13977 BetI-type transcriptional repressor, C-terminal DA85_RS02550 PF00440 Bacterial regulatory proteins, tetR family DA85_RS02560 PF03449 Transcription elongation factor, N-terminal DA85_RS02560 PF01272 Transcription elongation factor, GreA/GreB, C-term DA85_RS02570 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DA85_RS02575 PF01544 CorA-like Mg2+ transporter protein DA85_RS02580 PF07729 FCD domain DA85_RS02580 PF00392 Bacterial regulatory proteins, gntR family DA85_RS02585 PF07690 Major Facilitator Superfamily DA85_RS02595 PF05872 Bacterial protein of unknown function (DUF853) DA85_RS02600 PF03734 L,D-transpeptidase catalytic domain DA85_RS02600 PF01476 LysM domain DA85_RS02605 PF13419 Haloacid dehalogenase-like hydrolase DA85_RS02610 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DA85_RS02610 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DA85_RS02620 PF00326 Prolyl oligopeptidase family DA85_RS02620 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DA85_RS02625 PF05443 ROS/MUCR transcriptional regulator protein DA85_RS02635 PF11638 DnaA N-terminal domain DA85_RS02635 PF00308 Bacterial dnaA protein DA85_RS02635 PF08299 Bacterial dnaA protein helix-turn-helix DA85_RS02645 PF01425 Amidase DA85_RS02650 PF02657 Fe-S metabolism associated domain DA85_RS02660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA85_RS02660 PF00512 His Kinase A (phospho-acceptor) domain DA85_RS02690 PF00912 Transglycosylase DA85_RS02690 PF00905 Penicillin binding protein transpeptidase domain DA85_RS02705 PF04860 Phage portal protein DA85_RS02790 PF00486 Transcriptional regulatory protein, C terminal DA85_RS02790 PF00072 Response regulator receiver domain DA85_RS02795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA85_RS02810 PF03100 CcmE DA85_RS02815 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DA85_RS02815 PF01578 Cytochrome C assembly protein DA85_RS02820 PF03918 Cytochrome C biogenesis protein DA85_RS02825 PF13180 PDZ domain DA85_RS02830 PF00486 Transcriptional regulatory protein, C terminal DA85_RS02830 PF00072 Response regulator receiver domain DA85_RS02835 PF00512 His Kinase A (phospho-acceptor) domain DA85_RS02835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA85_RS02835 PF00672 HAMP domain DA85_RS02840 PF08335 GlnD PII-uridylyltransferase DA85_RS02840 PF03710 Glutamate-ammonia ligase adenylyltransferase DA85_RS02850 PF00512 His Kinase A (phospho-acceptor) domain DA85_RS02850 PF00989 PAS fold DA85_RS02850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA85_RS02855 PF01433 Peptidase family M1 domain DA85_RS02855 PF11940 Domain of unknown function (DUF3458) Ig-like fold DA85_RS02855 PF17432 Domain of unknown function (DUF3458_C) ARM repeats DA85_RS02870 PF03167 Uracil DNA glycosylase superfamily DA85_RS02885 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus DA85_RS02885 PF01048 Phosphorylase superfamily DA85_RS02900 PF02798 Glutathione S-transferase, N-terminal domain DA85_RS02900 PF00043 Glutathione S-transferase, C-terminal domain DA85_RS02935 PF00155 Aminotransferase class I and II DA85_RS02940 PF00589 Phage integrase family DA85_RS02940 PF13495 Phage integrase, N-terminal SAM-like domain DA85_RS02945 PF02530 Porin subfamily DA85_RS02955 PF02530 Porin subfamily DA85_RS02970 PF00829 Ribosomal prokaryotic L21 protein DA85_RS02975 PF01464 Transglycosylase SLT domain DA85_RS02975 PF14718 Soluble lytic murein transglycosylase L domain DA85_RS02980 PF00701 Dihydrodipicolinate synthetase family DA85_RS02985 PF01668 SmpB protein DA85_RS03000 PF01192 RNA polymerase Rpb6 DA85_RS03005 PF13291 ACT domain DA85_RS03005 PF04607 Region found in RelA / SpoT proteins DA85_RS03005 PF02824 TGS domain DA85_RS03010 PF00156 Phosphoribosyl transferase domain DA85_RS03015 PF00027 Cyclic nucleotide-binding domain DA85_RS03015 PF13545 Crp-like helix-turn-helix domain DA85_RS03020 PF04055 Radical SAM superfamily DA85_RS03025 PF07690 Major Facilitator Superfamily DA85_RS03030 PF02311 AraC-like ligand binding domain DA85_RS03030 PF12833 Helix-turn-helix domain DA85_RS03040 PF01648 4'-phosphopantetheinyl transferase superfamily DA85_RS03045 PF10502 Signal peptidase, peptidase S26 DA85_RS03050 PF00035 Double-stranded RNA binding motif DA85_RS03050 PF14622 Ribonuclease-III-like DA85_RS03055 PF01926 50S ribosome-binding GTPase DA85_RS03055 PF07650 KH domain DA85_RS03060 PF02565 Recombination protein O C terminal DA85_RS03060 PF11967 Recombination protein O N terminal DA85_RS03070 PF01966 HD domain DA85_RS03080 PF01979 Amidohydrolase family DA85_RS03100 PF00293 NUDIX domain DA85_RS03110 PF01810 LysE type translocator DA85_RS03120 PF01406 tRNA synthetases class I (C) catalytic domain DA85_RS03125 PF00682 HMGL-like DA85_RS03125 PF08502 LeuA allosteric (dimerisation) domain DA85_RS03130 PF00892 EamA-like transporter family DA85_RS03135 PF01551 Peptidase family M23 DA85_RS03140 PF00398 Ribosomal RNA adenine dimethylase DA85_RS03145 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DA85_RS03150 PF09312 SurA N-terminal domain DA85_RS03150 PF00639 PPIC-type PPIASE domain DA85_RS03155 PF03968 OstA-like protein DA85_RS03155 PF04453 LPS transport system D DA85_RS03170 PF02789 Cytosol aminopeptidase family, N-terminal domain DA85_RS03170 PF00883 Cytosol aminopeptidase family, catalytic domain DA85_RS03185 PF00005 ABC transporter DA85_RS03185 PF12848 ABC transporter DA85_RS03195 PF00334 Nucleoside diphosphate kinase DA85_RS03205 PF02391 MoaE protein DA85_RS03210 PF02597 ThiS family DA85_RS03215 PF01066 CDP-alcohol phosphatidyltransferase DA85_RS03220 PF02151 UvrB/uvrC motif DA85_RS03220 PF08459 UvrC Helix-hairpin-helix N-terminal DA85_RS03220 PF12826 Helix-hairpin-helix motif DA85_RS03220 PF01541 GIY-YIG catalytic domain DA85_RS03230 PF13505 Outer membrane protein beta-barrel domain DA85_RS03240 PF00445 Ribonuclease T2 family DA85_RS03250 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ DA85_RS03260 PF00384 Molybdopterin oxidoreductase DA85_RS03260 PF18364 Molybdopterin oxidoreductase N-terminal domain DA85_RS03260 PF01568 Molydopterin dinucleotide binding domain DA85_RS03270 PF00551 Formyl transferase DA85_RS03275 PF00586 AIR synthase related protein, N-terminal domain DA85_RS03275 PF02769 AIR synthase related protein, C-terminal domain DA85_RS03280 PF01594 AI-2E family transporter DA85_RS03310 PF02652 L-lactate permease DA85_RS03410 PF01053 Cys/Met metabolism PLP-dependent enzyme DA85_RS03425 PF00497 Bacterial extracellular solute-binding proteins, family 3 DA85_RS03430 PF00528 Binding-protein-dependent transport system inner membrane component DA85_RS03435 PF00528 Binding-protein-dependent transport system inner membrane component DA85_RS03440 PF00005 ABC transporter DA85_RS03445 PF01494 FAD binding domain DA85_RS03455 PF17941 Polyphosphate kinase C-terminal domain 1 DA85_RS03455 PF13090 Polyphosphate kinase C-terminal domain 2 DA85_RS03455 PF02503 Polyphosphate kinase middle domain DA85_RS03455 PF13089 Polyphosphate kinase N-terminal domain DA85_RS03465 PF01612 3'-5' exonuclease DA85_RS03465 PF00570 HRDC domain DA85_RS03470 PF02938 GAD domain DA85_RS03470 PF00152 tRNA synthetases class II (D, K and N) DA85_RS03470 PF01336 OB-fold nucleic acid binding domain DA85_RS03480 PF00521 DNA gyrase/topoisomerase IV, subunit A DA85_RS03480 PF03989 DNA gyrase C-terminal domain, beta-propeller DA85_RS03485 PF04377 Arginine-tRNA-protein transferase, C terminus DA85_RS03485 PF04376 Arginine-tRNA-protein transferase, N terminus DA85_RS03495 PF00490 Delta-aminolevulinic acid dehydratase DA85_RS03515 PF03734 L,D-transpeptidase catalytic domain DA85_RS03520 PF00464 Serine hydroxymethyltransferase DA85_RS03525 PF03477 ATP cone domain DA85_RS03530 PF01872 RibD C-terminal domain DA85_RS03530 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DA85_RS03535 PF00677 Lumazine binding domain DA85_RS03540 PF00885 6,7-dimethyl-8-ribityllumazine synthase DA85_RS03545 PF01029 NusB family DA85_RS03550 PF03030 Inorganic H+ pyrophosphatase DA85_RS03555 PF04355 SmpA / OmlA family DA85_RS03570 PF02504 Fatty acid synthesis protein DA85_RS03575 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DA85_RS03575 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DA85_RS03580 PF00216 Bacterial DNA-binding protein DA85_RS03585 PF13411 MerR HTH family regulatory protein DA85_RS03590 PF00893 Small Multidrug Resistance protein DA85_RS03625 PF02628 Cytochrome oxidase assembly protein DA85_RS03630 PF01118 Semialdehyde dehydrogenase, NAD binding domain DA85_RS03635 PF00491 Arginase family DA85_RS03640 PF00380 Ribosomal protein S9/S16 DA85_RS03645 PF00572 Ribosomal protein L13 DA85_RS03655 PF01053 Cys/Met metabolism PLP-dependent enzyme DA85_RS03700 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DA85_RS03705 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DA85_RS03710 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DA85_RS03715 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DA85_RS03725 PF10531 SLBB domain DA85_RS03725 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DA85_RS03725 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DA85_RS03730 PF00384 Molybdopterin oxidoreductase DA85_RS03730 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DA85_RS03730 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal DA85_RS03735 PF00146 NADH dehydrogenase DA85_RS03740 PF12838 4Fe-4S dicluster domain DA85_RS03745 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DA85_RS03750 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DA85_RS03755 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DA85_RS03755 PF00361 Proton-conducting membrane transporter DA85_RS03760 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus DA85_RS03760 PF00361 Proton-conducting membrane transporter DA85_RS03765 PF00361 Proton-conducting membrane transporter DA85_RS03770 PF02237 Biotin protein ligase C terminal domain DA85_RS03770 PF03099 Biotin/lipoate A/B protein ligase family DA85_RS03775 PF12706 Beta-lactamase superfamily domain DA85_RS03775 PF17770 Ribonuclease J C-terminal domain DA85_RS03775 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DA85_RS03790 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DA85_RS03790 PF03129 Anticodon binding domain DA85_RS03795 PF02687 FtsX-like permease family DA85_RS03795 PF12704 MacB-like periplasmic core domain DA85_RS03800 PF00005 ABC transporter DA85_RS03805 PF02811 PHP domain DA85_RS03805 PF14579 Helix-hairpin-helix motif DA85_RS03805 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DA85_RS03805 PF07733 Bacterial DNA polymerase III alpha NTPase domain DA85_RS03825 PF00163 Ribosomal protein S4/S9 N-terminal domain DA85_RS03825 PF01479 S4 domain DA85_RS03830 PF01171 PP-loop family DA85_RS03835 PF00459 Inositol monophosphatase family DA85_RS03840 PF07690 Major Facilitator Superfamily DA85_RS03845 PF00462 Glutaredoxin DA85_RS03855 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DA85_RS03855 PF00586 AIR synthase related protein, N-terminal domain DA85_RS03855 PF02769 AIR synthase related protein, C-terminal domain DA85_RS03865 PF13417 Glutathione S-transferase, N-terminal domain DA85_RS03875 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase DA85_RS03880 PF01259 SAICAR synthetase DA85_RS03890 PF03328 HpcH/HpaI aldolase/citrate lyase family DA85_RS03900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DA85_RS03905 PF00206 Lyase DA85_RS03905 PF10397 Adenylosuccinate lyase C-terminus DA85_RS03910 PF00834 Ribulose-phosphate 3 epimerase family DA85_RS03920 PF08240 Alcohol dehydrogenase GroES-like domain DA85_RS03920 PF00107 Zinc-binding dehydrogenase DA85_RS03925 PF02801 Beta-ketoacyl synthase, C-terminal domain DA85_RS03925 PF00109 Beta-ketoacyl synthase, N-terminal domain DA85_RS03930 PF00109 Beta-ketoacyl synthase, N-terminal domain DA85_RS03930 PF02801 Beta-ketoacyl synthase, C-terminal domain DA85_RS03935 PF00550 Phosphopantetheine attachment site DA85_RS03950 PF00294 pfkB family carbohydrate kinase DA85_RS03955 PF06299 Protein of unknown function (DUF1045) DA85_RS03960 PF07969 Amidohydrolase family DA85_RS03965 PF13419 Haloacid dehalogenase-like hydrolase DA85_RS03975 PF01207 Dihydrouridine synthase (Dus) DA85_RS03990 PF02654 Cobalamin-5-phosphate synthase DA85_RS03995 PF02277 Phosphoribosyltransferase DA85_RS04000 PF01037 Lrp/AsnC ligand binding domain DA85_RS04000 PF13404 AsnC-type helix-turn-helix domain DA85_RS04005 PF03167 Uracil DNA glycosylase superfamily DA85_RS04015 PF08238 Sel1 repeat DA85_RS04030 PF01521 Iron-sulphur cluster biosynthesis DA85_RS04035 PF01966 HD domain DA85_RS04035 PF13286 Phosphohydrolase-associated domain DA85_RS04040 PF00750 tRNA synthetases class I (R) DA85_RS04040 PF05746 DALR anticodon binding domain DA85_RS04040 PF03485 Arginyl tRNA synthetase N terminal domain DA85_RS04050 PF00933 Glycosyl hydrolase family 3 N terminal domain DA85_RS04055 PF02616 Segregation and condensation protein ScpA DA85_RS04060 PF04079 Segregation and condensation complex subunit ScpB DA85_RS04065 PF02416 mttA/Hcf106 family DA85_RS04070 PF02416 mttA/Hcf106 family DA85_RS04075 PF00902 Sec-independent protein translocase protein (TatC) DA85_RS04080 PF02403 Seryl-tRNA synthetase N-terminal domain DA85_RS04080 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DA85_RS04085 PF01975 Survival protein SurE DA85_RS04100 PF01551 Peptidase family M23 DA85_RS04100 PF01476 LysM domain DA85_RS04110 PF02699 Preprotein translocase subunit DA85_RS04115 PF02355 Protein export membrane protein DA85_RS04115 PF07549 SecD/SecF GG Motif DA85_RS04130 PF01134 Glucose inhibited division protein A DA85_RS04155 PF05698 Bacterial trigger factor protein (TF) C-terminus DA85_RS04155 PF05697 Bacterial trigger factor protein (TF) DA85_RS04155 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DA85_RS04160 PF02637 GatB domain DA85_RS04160 PF02934 GatB/GatE catalytic domain DA85_RS04175 PF09923 Uncharacterized protein conserved in bacteria (DUF2155) DA85_RS04180 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DA85_RS04185 PF02785 Biotin carboxylase C-terminal domain DA85_RS04185 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DA85_RS04185 PF00289 Biotin carboxylase, N-terminal domain DA85_RS04190 PF00364 Biotin-requiring enzyme DA85_RS04195 PF01220 Dehydroquinase class II DA85_RS04205 PF01435 Peptidase family M48 DA85_RS04215 PF00155 Aminotransferase class I and II DA85_RS04220 PF10150 Ribonuclease E/G family DA85_RS04220 PF12111 Polyribonucleotide phosphorylase C terminal DA85_RS04220 PF00575 S1 RNA binding domain DA85_RS04230 PF01520 N-acetylmuramoyl-L-alanine amidase DA85_RS04230 PF11741 AMIN domain DA85_RS04235 PF00905 Penicillin binding protein transpeptidase domain DA85_RS04235 PF00912 Transglycosylase DA85_RS04235 PF17092 Penicillin-binding protein OB-like domain DA85_RS04240 PF03462 PCRF domain DA85_RS04240 PF00472 RF-1 domain DA85_RS04245 PF13340 Putative transposase of IS4/5 family (DUF4096) DA85_RS04255 PF04305 Protein of unknown function (DUF455) DA85_RS04260 PF00578 AhpC/TSA family DA85_RS04270 PF00579 tRNA synthetases class I (W and Y) DA85_RS04275 PF03702 Anhydro-N-acetylmuramic acid kinase DA85_RS04280 PF00893 Small Multidrug Resistance protein DA85_RS04285 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DA85_RS04290 PF00266 Aminotransferase class-V DA85_RS04295 PF01458 Uncharacterized protein family (UPF0051) DA85_RS04300 PF00005 ABC transporter DA85_RS04305 PF01458 Uncharacterized protein family (UPF0051) DA85_RS04310 PF00266 Aminotransferase class-V DA85_RS04315 PF01883 Iron-sulfur cluster assembly protein DA85_RS04330 PF01513 ATP-NAD kinase DA85_RS04335 PF00270 DEAD/DEAH box helicase DA85_RS04335 PF00271 Helicase conserved C-terminal domain DA85_RS04340 PF01521 Iron-sulphur cluster biosynthesis DA85_RS04360 PF02321 Outer membrane efflux protein DA85_RS04370 PF00133 tRNA synthetases class I (I, L, M and V) DA85_RS04370 PF08264 Anticodon-binding domain of tRNA DA85_RS04370 PF10458 Valyl tRNA synthetase tRNA binding arm DA85_RS04385 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DA85_RS04385 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DA85_RS04390 PF13417 Glutathione S-transferase, N-terminal domain DA85_RS04390 PF00043 Glutathione S-transferase, C-terminal domain DA85_RS04395 PF00528 Binding-protein-dependent transport system inner membrane component DA85_RS04400 PF00528 Binding-protein-dependent transport system inner membrane component DA85_RS04405 PF00497 Bacterial extracellular solute-binding proteins, family 3 DA85_RS04415 PF12804 MobA-like NTP transferase domain DA85_RS04420 PF04055 Radical SAM superfamily DA85_RS04420 PF06463 Molybdenum Cofactor Synthesis C DA85_RS04430 PF01494 FAD binding domain DA85_RS04435 PF05683 Fumarase C-terminus DA85_RS04435 PF05681 Fumarate hydratase (Fumerase) DA85_RS04440 PF03734 L,D-transpeptidase catalytic domain DA85_RS04440 PF01471 Putative peptidoglycan binding domain DA85_RS04470 PF00589 Phage integrase family DA85_RS04510 PF13505 Outer membrane protein beta-barrel domain DA85_RS04535 PF13340 Putative transposase of IS4/5 family (DUF4096) DA85_RS04540 PF01609 Transposase DDE domain DA85_RS04575 PF03960 ArsC family DA85_RS04580 PF05036 Sporulation related domain DA85_RS04580 PF03330 Lytic transglycolase DA85_RS04585 PF07943 Penicillin-binding protein 5, C-terminal domain DA85_RS04585 PF00768 D-alanyl-D-alanine carboxypeptidase DA85_RS04590 PF02223 Thymidylate kinase DA85_RS04595 PF09115 DNA polymerase III, delta subunit, C terminal DA85_RS04600 PF08264 Anticodon-binding domain of tRNA DA85_RS04600 PF09334 tRNA synthetases class I (M) DA85_RS04605 PF01026 TatD related DNase DA85_RS04615 PF00005 ABC transporter DA85_RS04615 PF00664 ABC transporter transmembrane region DA85_RS04620 PF01479 S4 domain DA85_RS04620 PF00849 RNA pseudouridylate synthase DA85_RS04630 PF13419 Haloacid dehalogenase-like hydrolase DA85_RS04640 PF00120 Glutamine synthetase, catalytic domain DA85_RS04640 PF03951 Glutamine synthetase, beta-Grasp domain DA85_RS04645 PF00543 Nitrogen regulatory protein P-II DA85_RS04650 PF01256 Carbohydrate kinase DA85_RS04650 PF03853 YjeF-related protein N-terminus DA85_RS04660 PF13419 Haloacid dehalogenase-like hydrolase DA85_RS04665 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DA85_RS04675 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA85_RS04675 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DA85_RS04680 PF01474 Class-II DAHP synthetase family DA85_RS04685 PF01219 Prokaryotic diacylglycerol kinase DA85_RS04690 PF00795 Carbon-nitrogen hydrolase DA85_RS04690 PF02540 NAD synthase DA85_RS04695 PF00749 tRNA synthetases class I (E and Q), catalytic domain DA85_RS04705 PF00390 Malic enzyme, N-terminal domain DA85_RS04705 PF03949 Malic enzyme, NAD binding domain DA85_RS04705 PF01515 Phosphate acetyl/butaryl transferase DA85_RS04710 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DA85_RS04710 PF13378 Enolase C-terminal domain-like DA85_RS04715 PF02405 Permease MlaE DA85_RS04720 PF00005 ABC transporter DA85_RS04740 PF00111 2Fe-2S iron-sulfur cluster binding domain DA85_RS04745 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA85_RS04755 PF00809 Pterin binding enzyme DA85_RS04765 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DA85_RS04775 PF05128 Domain of unknown function (DUF697) DA85_RS04780 PF04317 YcjX-like family, DUF463 DA85_RS04790 PF01258 Prokaryotic dksA/traR C4-type zinc finger DA85_RS04800 PF00512 His Kinase A (phospho-acceptor) domain DA85_RS04800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA85_RS04800 PF00072 Response regulator receiver domain DA85_RS04800 PF08448 PAS fold DA85_RS04800 PF13188 PAS domain DA85_RS04820 PF02867 Ribonucleotide reductase, barrel domain DA85_RS04820 PF08471 Class II vitamin B12-dependent ribonucleotide reductase DA85_RS04825 PF00293 NUDIX domain DA85_RS04830 PF00156 Phosphoribosyl transferase domain DA85_RS04840 PF00994 Probable molybdopterin binding domain DA85_RS04840 PF18146 Damage-inducible protein CinA KH domain DA85_RS04840 PF02464 Competence-damaged protein DA85_RS04845 PF03358 NADPH-dependent FMN reductase DA85_RS04855 PF00291 Pyridoxal-phosphate dependent enzyme DA85_RS04855 PF00585 C-terminal regulatory domain of Threonine dehydratase DA85_RS04860 PF00271 Helicase conserved C-terminal domain DA85_RS04860 PF00270 DEAD/DEAH box helicase DA85_RS04865 PF00291 Pyridoxal-phosphate dependent enzyme DA85_RS04870 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DA85_RS04870 PF01411 tRNA synthetases class II (A) DA85_RS04875 PF00581 Rhodanese-like domain DA85_RS04885 PF00990 Diguanylate cyclase, GGDEF domain DA85_RS04890 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DA85_RS04890 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DA85_RS04895 PF07690 Major Facilitator Superfamily DA85_RS04900 PF00529 HlyD membrane-fusion protein of T1SS DA85_RS04900 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DA85_RS04905 PF08240 Alcohol dehydrogenase GroES-like domain DA85_RS04910 PF01321 Creatinase/Prolidase N-terminal domain DA85_RS04910 PF00557 Metallopeptidase family M24 DA85_RS04920 PF13593 SBF-like CPA transporter family (DUF4137) DA85_RS04925 PF16363 GDP-mannose 4,6 dehydratase DA85_RS04930 PF03819 MazG nucleotide pyrophosphohydrolase domain DA85_RS04935 PF01613 Flavin reductase like domain DA85_RS04950 PF03129 Anticodon binding domain DA85_RS04950 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DA85_RS04950 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DA85_RS04955 PF00768 D-alanyl-D-alanine carboxypeptidase DA85_RS04960 PF01809 Putative membrane protein insertion efficiency factor DA85_RS04970 PF01227 GTP cyclohydrolase I DA85_RS04975 PF01502 Phosphoribosyl-AMP cyclohydrolase DA85_RS04980 PF01734 Patatin-like phospholipase DA85_RS05015 PF00239 Resolvase, N terminal domain DA85_RS05015 PF02796 Helix-turn-helix domain of resolvase DA85_RS05035 PF02515 CoA-transferase family III DA85_RS05040 PF02770 Acyl-CoA dehydrogenase, middle domain DA85_RS05040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DA85_RS05040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DA85_RS05045 PF03466 LysR substrate binding domain DA85_RS05045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA85_RS05050 PF00296 Luciferase-like monooxygenase DA85_RS05055 PF00873 AcrB/AcrD/AcrF family DA85_RS05060 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DA85_RS05070 PF01702 Queuine tRNA-ribosyltransferase DA85_RS05075 PF02547 Queuosine biosynthesis protein DA85_RS05080 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DA85_RS05085 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DA85_RS05090 PF01467 Cytidylyltransferase-like DA85_RS05100 PF03989 DNA gyrase C-terminal domain, beta-propeller DA85_RS05100 PF00521 DNA gyrase/topoisomerase IV, subunit A DA85_RS05105 PF01914 MarC family integral membrane protein DA85_RS05115 PF07702 UTRA domain DA85_RS05115 PF00392 Bacterial regulatory proteins, gntR family DA85_RS05120 PF00436 Single-strand binding protein family DA85_RS05125 PF17760 UvrA interaction domain DA85_RS05125 PF17755 UvrA DNA-binding domain DA85_RS05130 PF00216 Bacterial DNA-binding protein DA85_RS05135 PF00004 ATPase family associated with various cellular activities (AAA) DA85_RS05135 PF05362 Lon protease (S16) C-terminal proteolytic domain DA85_RS05135 PF02190 ATP-dependent protease La (LON) substrate-binding domain DA85_RS05140 PF06689 ClpX C4-type zinc finger DA85_RS05140 PF10431 C-terminal, D2-small domain, of ClpB protein DA85_RS05140 PF07724 AAA domain (Cdc48 subfamily) DA85_RS05145 PF00574 Clp protease DA85_RS05150 PF01926 50S ribosome-binding GTPase DA85_RS05150 PF16360 GTP-binding GTPase Middle Region DA85_RS05150 PF13167 GTP-binding GTPase N-terminal DA85_RS05155 PF17209 Hfq protein DA85_RS05165 PF02080 TrkA-C domain DA85_RS05165 PF02254 TrkA-N domain DA85_RS05170 PF02954 Bacterial regulatory protein, Fis family DA85_RS05170 PF00072 Response regulator receiver domain DA85_RS05170 PF00158 Sigma-54 interaction domain DA85_RS05175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA85_RS05175 PF00672 HAMP domain DA85_RS05175 PF00989 PAS fold DA85_RS05175 PF00512 His Kinase A (phospho-acceptor) domain DA85_RS05180 PF00158 Sigma-54 interaction domain DA85_RS05180 PF00072 Response regulator receiver domain DA85_RS05180 PF02954 Bacterial regulatory protein, Fis family DA85_RS05185 PF00989 PAS fold DA85_RS05185 PF00512 His Kinase A (phospho-acceptor) domain DA85_RS05185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA85_RS05190 PF01207 Dihydrouridine synthase (Dus) DA85_RS05195 PF02542 YgbB family DA85_RS05195 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DA85_RS05200 PF00994 Probable molybdopterin binding domain DA85_RS05200 PF18146 Damage-inducible protein CinA KH domain DA85_RS05200 PF02464 Competence-damaged protein DA85_RS05210 PF03364 Polyketide cyclase / dehydrase and lipid transport DA85_RS05215 PF04055 Radical SAM superfamily DA85_RS05215 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DA85_RS05225 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA85_RS05225 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DA85_RS05230 PF00364 Biotin-requiring enzyme DA85_RS05230 PF02817 e3 binding domain DA85_RS05230 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DA85_RS05235 PF02779 Transketolase, pyrimidine binding domain DA85_RS05235 PF02780 Transketolase, C-terminal domain DA85_RS05235 PF00364 Biotin-requiring enzyme DA85_RS05240 PF00676 Dehydrogenase E1 component DA85_RS05245 PF04977 Septum formation initiator DA85_RS05255 PF00113 Enolase, C-terminal TIM barrel domain DA85_RS05255 PF03952 Enolase, N-terminal domain DA85_RS05260 PF00793 DAHP synthetase I family DA85_RS05265 PF06418 CTP synthase N-terminus DA85_RS05265 PF00117 Glutamine amidotransferase class-I DA85_RS05275 PF03840 Preprotein translocase SecG subunit DA85_RS05280 PF00121 Triosephosphate isomerase DA85_RS05285 PF13145 PPIC-type PPIASE domain DA85_RS05290 PF00591 Glycosyl transferase family, a/b domain DA85_RS05290 PF02885 Glycosyl transferase family, helical bundle domain DA85_RS05295 PF00218 Indole-3-glycerol phosphate synthase DA85_RS05300 PF01967 MoaC family DA85_RS05305 PF00994 Probable molybdopterin binding domain DA85_RS05305 PF03453 MoeA N-terminal region (domain I and II) DA85_RS05305 PF03454 MoeA C-terminal region (domain IV) DA85_RS05310 PF01726 LexA DNA binding domain DA85_RS05310 PF00717 Peptidase S24-like DA85_RS05315 PF03772 Competence protein DA85_RS05315 PF00753 Metallo-beta-lactamase superfamily DA85_RS05320 PF00749 tRNA synthetases class I (E and Q), catalytic domain DA85_RS05325 PF00285 Citrate synthase, C-terminal domain DA85_RS05330 PF02684 Lipid-A-disaccharide synthetase DA85_RS05340 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DA85_RS05340 PF00132 Bacterial transferase hexapeptide (six repeats) DA85_RS05345 PF07977 FabA-like domain DA85_RS05350 PF00132 Bacterial transferase hexapeptide (six repeats) DA85_RS05350 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DA85_RS05355 PF07244 Surface antigen variable number repeat DA85_RS05355 PF01103 Surface antigen DA85_RS05360 PF02163 Peptidase family M50 DA85_RS05360 PF17820 PDZ domain DA85_RS05370 PF01255 Putative undecaprenyl diphosphate synthase DA85_RS05375 PF01765 Ribosome recycling factor DA85_RS05380 PF00696 Amino acid kinase family DA85_RS05385 PF00889 Elongation factor TS DA85_RS05390 PF00318 Ribosomal protein S2 DA85_RS05410 PF03009 Glycerophosphoryl diester phosphodiesterase family DA85_RS05420 PF01230 HIT domain DA85_RS05425 PF17871 AAA lid domain DA85_RS05425 PF02861 Clp amino terminal domain, pathogenicity island component DA85_RS05425 PF10431 C-terminal, D2-small domain, of ClpB protein DA85_RS05425 PF00004 ATPase family associated with various cellular activities (AAA) DA85_RS05425 PF07724 AAA domain (Cdc48 subfamily) DA85_RS05430 PF02617 ATP-dependent Clp protease adaptor protein ClpS DA85_RS05435 PF07943 Penicillin-binding protein 5, C-terminal domain DA85_RS05435 PF00768 D-alanyl-D-alanine carboxypeptidase DA85_RS05450 PF03313 Serine dehydratase alpha chain DA85_RS05450 PF03315 Serine dehydratase beta chain DA85_RS05465 PF09278 MerR, DNA binding DA85_RS05465 PF00376 MerR family regulatory protein DA85_RS05485 PF14489 QueF-like protein DA85_RS05500 PF01381 Helix-turn-helix DA85_RS05500 PF06114 IrrE N-terminal-like domain DA85_RS05500 PF09856 Predicted transcriptional regulator (DUF2083) DA85_RS05505 PF01039 Carboxyl transferase domain DA85_RS05510 PF00364 Biotin-requiring enzyme DA85_RS05510 PF00289 Biotin carboxylase, N-terminal domain DA85_RS05510 PF02785 Biotin carboxylase C-terminal domain DA85_RS05510 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DA85_RS05510 PF18140 Propionyl-coenzyme A carboxylase BT domain DA85_RS05515 PF01642 Methylmalonyl-CoA mutase DA85_RS05515 PF02310 B12 binding domain DA85_RS05530 PF16868 NMT1-like family DA85_RS05535 PF01177 Asp/Glu/Hydantoin racemase DA85_RS05540 PF00588 SpoU rRNA Methylase family DA85_RS05545 PF01965 DJ-1/PfpI family DA85_RS05555 PF00180 Isocitrate/isopropylmalate dehydrogenase DA85_RS05560 PF00245 Alkaline phosphatase DA85_RS05565 PF02272 DHHA1 domain DA85_RS05565 PF01411 tRNA synthetases class II (A) DA85_RS05565 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DA85_RS05570 PF00154 recA bacterial DNA recombination protein DA85_RS05575 PF13488 Glycine zipper DA85_RS05575 PF00691 OmpA family DA85_RS05585 PF00004 ATPase family associated with various cellular activities (AAA) DA85_RS05585 PF16193 AAA C-terminal domain DA85_RS05585 PF12002 MgsA AAA+ ATPase C terminal DA85_RS05590 PF13180 PDZ domain DA85_RS05590 PF17820 PDZ domain DA85_RS05595 PF01196 Ribosomal protein L17 DA85_RS05600 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DA85_RS05600 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DA85_RS05600 PF01000 RNA polymerase Rpb3/RpoA insert domain DA85_RS05605 PF00411 Ribosomal protein S11 DA85_RS05610 PF00416 Ribosomal protein S13/S18 DA85_RS05620 PF00344 SecY translocase DA85_RS05625 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DA85_RS05630 PF00327 Ribosomal protein L30p/L7e DA85_RS05635 PF03719 Ribosomal protein S5, C-terminal domain DA85_RS05635 PF00333 Ribosomal protein S5, N-terminal domain DA85_RS05640 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DA85_RS05645 PF00347 Ribosomal protein L6 DA85_RS05650 PF00410 Ribosomal protein S8 DA85_RS05655 PF00253 Ribosomal protein S14p/S29e DA85_RS05660 PF00281 Ribosomal protein L5 DA85_RS05660 PF00673 ribosomal L5P family C-terminus DA85_RS05665 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DA85_RS05665 PF00467 KOW motif DA85_RS05670 PF00238 Ribosomal protein L14p/L23e DA85_RS05675 PF00366 Ribosomal protein S17 DA85_RS05680 PF00831 Ribosomal L29 protein DA85_RS05685 PF00252 Ribosomal protein L16p/L10e DA85_RS05690 PF00189 Ribosomal protein S3, C-terminal domain DA85_RS05690 PF07650 KH domain DA85_RS05695 PF00237 Ribosomal protein L22p/L17e DA85_RS05700 PF00203 Ribosomal protein S19 DA85_RS05705 PF00181 Ribosomal Proteins L2, RNA binding domain DA85_RS05705 PF03947 Ribosomal Proteins L2, C-terminal domain DA85_RS05710 PF00276 Ribosomal protein L23 DA85_RS05715 PF00573 Ribosomal protein L4/L1 family DA85_RS05720 PF00297 Ribosomal protein L3 DA85_RS05725 PF00338 Ribosomal protein S10p/S20e DA85_RS05730 PF03143 Elongation factor Tu C-terminal domain DA85_RS05730 PF03144 Elongation factor Tu domain 2 DA85_RS05730 PF00009 Elongation factor Tu GTP binding domain DA85_RS05735 PF00009 Elongation factor Tu GTP binding domain DA85_RS05735 PF03764 Elongation factor G, domain IV DA85_RS05735 PF00679 Elongation factor G C-terminus DA85_RS05735 PF14492 Elongation Factor G, domain II DA85_RS05735 PF03144 Elongation factor Tu domain 2 DA85_RS05740 PF00177 Ribosomal protein S7p/S5e DA85_RS05745 PF00164 Ribosomal protein S12/S23 DA85_RS05755 PF04998 RNA polymerase Rpb1, domain 5 DA85_RS05755 PF05000 RNA polymerase Rpb1, domain 4 DA85_RS05755 PF04997 RNA polymerase Rpb1, domain 1 DA85_RS05755 PF04983 RNA polymerase Rpb1, domain 3 DA85_RS05755 PF00623 RNA polymerase Rpb1, domain 2 DA85_RS05760 PF04563 RNA polymerase beta subunit DA85_RS05760 PF04561 RNA polymerase Rpb2, domain 2 DA85_RS05760 PF04565 RNA polymerase Rpb2, domain 3 DA85_RS05760 PF10385 RNA polymerase beta subunit external 1 domain DA85_RS05760 PF00562 RNA polymerase Rpb2, domain 6 DA85_RS05760 PF04560 RNA polymerase Rpb2, domain 7 DA85_RS05765 PF16320 Ribosomal protein L7/L12 dimerisation domain DA85_RS05765 PF00542 Ribosomal protein L7/L12 C-terminal domain DA85_RS05770 PF00466 Ribosomal protein L10 DA85_RS05775 PF00687 Ribosomal protein L1p/L10e family DA85_RS05780 PF00298 Ribosomal protein L11, RNA binding domain DA85_RS05780 PF03946 Ribosomal protein L11, N-terminal domain DA85_RS05785 PF00467 KOW motif DA85_RS05785 PF02357 Transcription termination factor nusG DA85_RS05790 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DA85_RS05800 PF00009 Elongation factor Tu GTP binding domain DA85_RS05800 PF03143 Elongation factor Tu C-terminal domain DA85_RS05800 PF03144 Elongation factor Tu domain 2 DA85_RS05815 PF00588 SpoU rRNA Methylase family DA85_RS05815 PF08032 RNA 2'-O ribose methyltransferase substrate binding DA85_RS05840 PF00132 Bacterial transferase hexapeptide (six repeats) DA85_RS05850 PF00132 Bacterial transferase hexapeptide (six repeats) DA85_RS05850 PF06426 Serine acetyltransferase, N-terminal DA85_RS05855 PF00561 alpha/beta hydrolase fold DA85_RS05865 PF00313 'Cold-shock' DNA-binding domain DA85_RS05870 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DA85_RS05880 PF02272 DHHA1 domain DA85_RS05880 PF17768 RecJ OB domain DA85_RS05880 PF01368 DHH family DA85_RS05885 PF01820 D-ala D-ala ligase N-terminus DA85_RS05885 PF07478 D-ala D-ala ligase C-terminus DA85_RS05890 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DA85_RS05895 PF03447 Homoserine dehydrogenase, NAD binding domain DA85_RS05895 PF00742 Homoserine dehydrogenase DA85_RS05895 PF01842 ACT domain DA85_RS05900 PF00155 Aminotransferase class I and II DA85_RS05930 PF17746 SfsA N-terminal OB domain DA85_RS05930 PF03749 Sugar fermentation stimulation protein RE domain DA85_RS05935 PF00557 Metallopeptidase family M24 DA85_RS05940 PF04002 RadC-like JAB domain DA85_RS05950 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DA85_RS05960 PF02570 Precorrin-8X methylmutase DA85_RS05965 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DA85_RS05970 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DA85_RS05985 PF01613 Flavin reductase like domain DA85_RS05995 PF03186 CobD/Cbib protein DA85_RS06000 PF00155 Aminotransferase class I and II DA85_RS06005 PF07685 CobB/CobQ-like glutamine amidotransferase domain DA85_RS06005 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DA85_RS06010 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DA85_RS06015 PF01888 CbiD DA85_RS06020 PF02571 Precorrin-6x reductase CbiJ/CobK DA85_RS06025 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DA85_RS06040 PF01925 Sulfite exporter TauE/SafE DA85_RS06045 PF00892 EamA-like transporter family DA85_RS06050 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP DA85_RS06055 PF02514 CobN/Magnesium Chelatase DA85_RS06060 PF02492 CobW/HypB/UreG, nucleotide-binding domain DA85_RS06060 PF07683 Cobalamin synthesis protein cobW C-terminal domain DA85_RS06065 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase DA85_RS06080 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DA85_RS06080 PF07685 CobB/CobQ-like glutamine amidotransferase domain DA85_RS06085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DA85_RS06085 PF02770 Acyl-CoA dehydrogenase, middle domain DA85_RS06085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DA85_RS06090 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DA85_RS06090 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DA85_RS06105 PF12833 Helix-turn-helix domain DA85_RS06105 PF01965 DJ-1/PfpI family DA85_RS06115 PF01266 FAD dependent oxidoreductase DA85_RS06115 PF16350 FAD dependent oxidoreductase central domain DA85_RS06115 PF01571 Aminomethyltransferase folate-binding domain DA85_RS06115 PF08669 Glycine cleavage T-protein C-terminal barrel domain DA85_RS06135 PF02355 Protein export membrane protein DA85_RS06135 PF07549 SecD/SecF GG Motif DA85_RS06140 PF02254 TrkA-N domain DA85_RS06140 PF00999 Sodium/hydrogen exchanger family DA85_RS06155 PF00528 Binding-protein-dependent transport system inner membrane component DA85_RS06160 PF00528 Binding-protein-dependent transport system inner membrane component DA85_RS06175 PF03471 Transporter associated domain DA85_RS06175 PF03741 Integral membrane protein TerC family DA85_RS06180 PF09335 SNARE associated Golgi protein DA85_RS06195 PF05025 RbsD / FucU transport protein family DA85_RS06205 PF00005 ABC transporter DA85_RS06210 PF02653 Branched-chain amino acid transport system / permease component DA85_RS06220 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DA85_RS06220 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DA85_RS06225 PF00005 ABC transporter DA85_RS06230 PF01032 FecCD transport family DA85_RS06240 PF00593 TonB dependent receptor DA85_RS06240 PF07715 TonB-dependent Receptor Plug Domain DA85_RS06250 PF00005 ABC transporter DA85_RS06255 PF13533 Biotin-lipoyl like DA85_RS06260 PF02638 Glycosyl hydrolase-like 10 DA85_RS06265 PF00547 Urease, gamma subunit DA85_RS06270 PF00699 Urease beta subunit DA85_RS06275 PF00449 Urease alpha-subunit, N-terminal domain DA85_RS06275 PF01979 Amidohydrolase family DA85_RS06280 PF05194 UreE urease accessory protein, C-terminal domain DA85_RS06280 PF02814 UreE urease accessory protein, N-terminal domain DA85_RS06285 PF01730 UreF DA85_RS06290 PF02492 CobW/HypB/UreG, nucleotide-binding domain DA85_RS06295 PF01774 UreD urease accessory protein DA85_RS06300 PF03253 Urea transporter DA85_RS06310 PF01891 Cobalt uptake substrate-specific transmembrane region DA85_RS06310 PF13190 PDGLE domain DA85_RS06325 PF00005 ABC transporter DA85_RS06330 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DA85_RS06330 PF03625 Domain of unknown function DUF302 DA85_RS06335 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DA85_RS06350 PF02567 Phenazine biosynthesis-like protein DA85_RS06365 PF07886 BA14K-like protein DA85_RS06370 PF00155 Aminotransferase class I and II DA85_RS06380 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DA85_RS06380 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DA85_RS06385 PF00440 Bacterial regulatory proteins, tetR family DA85_RS06390 PF02705 K+ potassium transporter DA85_RS06395 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DA85_RS06405 PF13538 UvrD-like helicase C-terminal domain DA85_RS06405 PF14490 Helix-hairpin-helix containing domain DA85_RS06405 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain DA85_RS06410 PF10369 Small subunit of acetolactate synthase DA85_RS06415 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DA85_RS06415 PF00205 Thiamine pyrophosphate enzyme, central domain DA85_RS06415 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DA85_RS06435 PF13180 PDZ domain DA85_RS06445 PF01145 SPFH domain / Band 7 family DA85_RS06450 PF01145 SPFH domain / Band 7 family DA85_RS06455 PF00186 Dihydrofolate reductase DA85_RS06460 PF00303 Thymidylate synthase DA85_RS06470 PF07690 Major Facilitator Superfamily DA85_RS06510 PF02913 FAD linked oxidases, C-terminal domain DA85_RS06510 PF01565 FAD binding domain DA85_RS06515 PF03928 Haem-degrading DA85_RS06525 PF13361 UvrD-like helicase C-terminal domain DA85_RS06525 PF00580 UvrD/REP helicase N-terminal domain DA85_RS06535 PF00132 Bacterial transferase hexapeptide (six repeats) DA85_RS06540 PF02630 SCO1/SenC DA85_RS06550 PF01321 Creatinase/Prolidase N-terminal domain DA85_RS06550 PF00557 Metallopeptidase family M24 DA85_RS06560 PF00533 BRCA1 C Terminus (BRCT) domain DA85_RS06560 PF01653 NAD-dependent DNA ligase adenylation domain DA85_RS06560 PF03120 NAD-dependent DNA ligase OB-fold domain DA85_RS06560 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DA85_RS06560 PF12826 Helix-hairpin-helix motif DA85_RS06565 PF02463 RecF/RecN/SMC N terminal domain DA85_RS06570 PF13525 Outer membrane lipoprotein DA85_RS06575 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DA85_RS06580 PF00091 Tubulin/FtsZ family, GTPase domain DA85_RS06580 PF12327 FtsZ family, C-terminal domain DA85_RS06585 PF02491 SHS2 domain inserted in FTSA DA85_RS06590 PF08478 POTRA domain, FtsQ-type DA85_RS06590 PF03799 Cell division protein FtsQ DA85_RS06595 PF07478 D-ala D-ala ligase C-terminus DA85_RS06595 PF01820 D-ala D-ala ligase N-terminus DA85_RS06600 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DA85_RS06600 PF01565 FAD binding domain DA85_RS06605 PF08245 Mur ligase middle domain DA85_RS06605 PF01225 Mur ligase family, catalytic domain DA85_RS06605 PF02875 Mur ligase family, glutamate ligase domain DA85_RS06610 PF03033 Glycosyltransferase family 28 N-terminal domain DA85_RS06610 PF04101 Glycosyltransferase family 28 C-terminal domain DA85_RS06615 PF01098 Cell cycle protein DA85_RS06620 PF02875 Mur ligase family, glutamate ligase domain DA85_RS06620 PF08245 Mur ligase middle domain DA85_RS06625 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DA85_RS06625 PF00953 Glycosyl transferase family 4 DA85_RS06630 PF01225 Mur ligase family, catalytic domain DA85_RS06630 PF08245 Mur ligase middle domain DA85_RS06630 PF02875 Mur ligase family, glutamate ligase domain DA85_RS06635 PF08245 Mur ligase middle domain DA85_RS06635 PF02875 Mur ligase family, glutamate ligase domain DA85_RS06635 PF01225 Mur ligase family, catalytic domain DA85_RS06640 PF03717 Penicillin-binding Protein dimerisation domain DA85_RS06640 PF00905 Penicillin binding protein transpeptidase domain DA85_RS06650 PF01795 MraW methylase family DA85_RS06655 PF01566 Natural resistance-associated macrophage protein DA85_RS06665 PF01510 N-acetylmuramoyl-L-alanine amidase DA85_RS06670 PF05099 Tellurite resistance protein TerB DA85_RS06670 PF00226 DnaJ domain DA85_RS06680 PF01183 Glycosyl hydrolases family 25 DA85_RS06695 PF02219 Methylenetetrahydrofolate reductase DA85_RS06700 PF01022 Bacterial regulatory protein, arsR family DA85_RS06710 PF00083 Sugar (and other) transporter DA85_RS06715 PF13847 Methyltransferase domain DA85_RS06720 PF12848 ABC transporter DA85_RS06720 PF00005 ABC transporter DA85_RS06730 PF12146 Serine aminopeptidase, S33 DA85_RS06750 PF00355 Rieske [2Fe-2S] domain DA85_RS06750 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DA85_RS06755 PF00970 Oxidoreductase FAD-binding domain DA85_RS06755 PF00111 2Fe-2S iron-sulfur cluster binding domain DA85_RS06755 PF00175 Oxidoreductase NAD-binding domain DA85_RS06760 PF08274 PhnA Zinc-Ribbon DA85_RS06760 PF03831 PhnA domain DA85_RS06765 PF00857 Isochorismatase family DA85_RS06780 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family DA85_RS06820 PF04402 Protein of unknown function (DUF541) DA85_RS06830 PF03692 Putative zinc- or iron-chelating domain DA85_RS06840 PF04542 Sigma-70 region 2 DA85_RS06840 PF03979 Sigma-70 factor, region 1.1 DA85_RS06840 PF04546 Sigma-70, non-essential region DA85_RS06840 PF04545 Sigma-70, region 4 DA85_RS06840 PF00140 Sigma-70 factor, region 1.2 DA85_RS06840 PF04539 Sigma-70 region 3 DA85_RS06845 PF01807 CHC2 zinc finger DA85_RS06845 PF08275 DNA primase catalytic core, N-terminal domain DA85_RS06845 PF08278 DNA primase DnaG DnaB-binding DA85_RS06845 PF10410 DnaB-helicase binding domain of primase DA85_RS06850 PF02690 Na+/Pi-cotransporter DA85_RS06860 PF00117 Glutamine amidotransferase class-I DA85_RS06860 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DA85_RS06865 PF04228 Putative neutral zinc metallopeptidase DA85_RS06880 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DA85_RS06880 PF02142 MGS-like domain DA85_RS06880 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DA85_RS06885 PF00005 ABC transporter DA85_RS06895 PF00313 'Cold-shock' DNA-binding domain DA85_RS06900 PF02798 Glutathione S-transferase, N-terminal domain DA85_RS06905 PF00155 Aminotransferase class I and II DA85_RS06915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA85_RS06915 PF03466 LysR substrate binding domain DA85_RS06920 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA85_RS06925 PF02386 Cation transport protein DA85_RS06930 PF01037 Lrp/AsnC ligand binding domain DA85_RS06935 PF00534 Glycosyl transferases group 1 DA85_RS06940 PF01272 Transcription elongation factor, GreA/GreB, C-term DA85_RS06940 PF03449 Transcription elongation factor, N-terminal DA85_RS06965 PF03061 Thioesterase superfamily DA85_RS06975 PF02151 UvrB/uvrC motif DA85_RS06975 PF04851 Type III restriction enzyme, res subunit DA85_RS06975 PF00271 Helicase conserved C-terminal domain DA85_RS06975 PF12344 Ultra-violet resistance protein B DA85_RS06975 PF17757 UvrB interaction domain DA85_RS06980 PF01551 Peptidase family M23 DA85_RS06980 PF01464 Transglycosylase SLT domain DA85_RS06980 PF10145 Phage-related minor tail protein DA85_RS06985 PF00313 'Cold-shock' DNA-binding domain DA85_RS06995 PF00753 Metallo-beta-lactamase superfamily DA85_RS07010 PF12802 MarR family DA85_RS07015 PF00486 Transcriptional regulatory protein, C terminal DA85_RS07015 PF00072 Response regulator receiver domain DA85_RS07020 PF00512 His Kinase A (phospho-acceptor) domain DA85_RS07020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA85_RS07020 PF00672 HAMP domain DA85_RS07020 PF16527 Two-component sensor protein CpxA, periplasmic domain DA85_RS07030 PF01588 Putative tRNA binding domain DA85_RS07045 PF01790 Prolipoprotein diacylglyceryl transferase DA85_RS07055 PF02578 Multi-copper polyphenol oxidoreductase laccase DA85_RS07075 PF14572 Phosphoribosyl synthetase-associated domain DA85_RS07075 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DA85_RS07090 PF14693 Ribosomal protein TL5, C-terminal domain DA85_RS07090 PF01386 Ribosomal L25p family DA85_RS07095 PF01195 Peptidyl-tRNA hydrolase DA85_RS07100 PF06071 Protein of unknown function (DUF933) DA85_RS07100 PF01926 50S ribosome-binding GTPase DA85_RS07105 PF01575 MaoC like domain DA85_RS07115 PF00156 Phosphoribosyl transferase domain DA85_RS07120 PF00032 Cytochrome b(C-terminal)/b6/petD DA85_RS07120 PF02167 Cytochrome C1 family DA85_RS07120 PF00033 Cytochrome b/b6/petB DA85_RS07125 PF00032 Cytochrome b(C-terminal)/b6/petD DA85_RS07125 PF00033 Cytochrome b/b6/petB DA85_RS07130 PF00355 Rieske [2Fe-2S] domain DA85_RS07130 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal DA85_RS07135 PF00005 ABC transporter DA85_RS07135 PF00664 ABC transporter transmembrane region DA85_RS07140 PF00664 ABC transporter transmembrane region DA85_RS07140 PF00005 ABC transporter DA85_RS07145 PF00588 SpoU rRNA Methylase family DA85_RS07160 PF01218 Coproporphyrinogen III oxidase DA85_RS07165 PF13508 Acetyltransferase (GNAT) domain DA85_RS07180 PF12627 Probable RNA and SrmB- binding site of polymerase A DA85_RS07180 PF01743 Poly A polymerase head domain DA85_RS07180 PF13735 tRNA nucleotidyltransferase domain 2 putative DA85_RS07185 PF00293 NUDIX domain DA85_RS07195 PF07726 ATPase family associated with various cellular activities (AAA) DA85_RS07195 PF17863 AAA lid domain DA85_RS07220 PF13409 Glutathione S-transferase, N-terminal domain DA85_RS07225 PF03922 OmpW family DA85_RS07230 PF00293 NUDIX domain DA85_RS07240 PF08502 LeuA allosteric (dimerisation) domain DA85_RS07240 PF00682 HMGL-like DA85_RS07245 PF01545 Cation efflux family DA85_RS07245 PF16916 Dimerisation domain of Zinc Transporter DA85_RS07250 PF04715 Anthranilate synthase component I, N terminal region DA85_RS07250 PF00425 chorismate binding enzyme DA85_RS07250 PF00117 Glutamine amidotransferase class-I DA85_RS07260 PF01037 Lrp/AsnC ligand binding domain DA85_RS07285 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DA85_RS07290 PF00528 Binding-protein-dependent transport system inner membrane component DA85_RS07295 PF00571 CBS domain DA85_RS07295 PF00005 ABC transporter DA85_RS07300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DA85_RS07300 PF00005 ABC transporter DA85_RS07305 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DA85_RS07305 PF00005 ABC transporter DA85_RS07310 PF12911 N-terminal TM domain of oligopeptide transport permease C DA85_RS07310 PF00528 Binding-protein-dependent transport system inner membrane component DA85_RS07315 PF00528 Binding-protein-dependent transport system inner membrane component DA85_RS07320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DA85_RS07325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DA85_RS07330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DA85_RS07340 PF01022 Bacterial regulatory protein, arsR family DA85_RS07345 PF00588 SpoU rRNA Methylase family DA85_RS07380 PF10090 Histidine phosphotransferase C-terminal domain DA85_RS07385 PF00486 Transcriptional regulatory protein, C terminal DA85_RS07385 PF00072 Response regulator receiver domain DA85_RS07395 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DA85_RS07400 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DA85_RS07400 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DA85_RS07420 PF00989 PAS fold DA85_RS07420 PF13188 PAS domain DA85_RS07420 PF00512 His Kinase A (phospho-acceptor) domain DA85_RS07420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA85_RS07430 PF00528 Binding-protein-dependent transport system inner membrane component DA85_RS07435 PF00528 Binding-protein-dependent transport system inner membrane component DA85_RS07440 PF08402 TOBE domain DA85_RS07440 PF00005 ABC transporter DA85_RS07445 PF13416 Bacterial extracellular solute-binding protein DA85_RS07450 PF01381 Helix-turn-helix DA85_RS07450 PF09856 Predicted transcriptional regulator (DUF2083) DA85_RS07450 PF06114 IrrE N-terminal-like domain DA85_RS07455 PF00463 Isocitrate lyase family DA85_RS07495 PF13505 Outer membrane protein beta-barrel domain DA85_RS07510 PF02734 DAK2 domain DA85_RS07515 PF02733 Dak1 domain DA85_RS07520 PF02734 DAK2 domain DA85_RS07525 PF02733 Dak1 domain DA85_RS07535 PF13407 Periplasmic binding protein domain DA85_RS07540 PF02653 Branched-chain amino acid transport system / permease component DA85_RS07555 PF00732 GMC oxidoreductase DA85_RS07555 PF05199 GMC oxidoreductase DA85_RS07560 PF00732 GMC oxidoreductase DA85_RS07560 PF05199 GMC oxidoreductase DA85_RS07605 PF00171 Aldehyde dehydrogenase family DA85_RS07630 PF00749 tRNA synthetases class I (E and Q), catalytic domain DA85_RS07635 PF01274 Malate synthase DA85_RS07645 PF00140 Sigma-70 factor, region 1.2 DA85_RS07645 PF04542 Sigma-70 region 2 DA85_RS07645 PF04545 Sigma-70, region 4 DA85_RS07650 PF00849 RNA pseudouridylate synthase DA85_RS07665 PF01475 Ferric uptake regulator family DA85_RS07670 PF13426 PAS domain DA85_RS07670 PF07536 HWE histidine kinase DA85_RS07670 PF08447 PAS fold DA85_RS07680 PF00072 Response regulator receiver domain DA85_RS07690 PF08281 Sigma-70, region 4 DA85_RS07690 PF04542 Sigma-70 region 2 DA85_RS07695 PF13426 PAS domain DA85_RS07695 PF07568 Histidine kinase DA85_RS07695 PF13581 Histidine kinase-like ATPase domain DA85_RS07720 PF01618 MotA/TolQ/ExbB proton channel family DA85_RS07725 PF02472 Biopolymer transport protein ExbD/TolR DA85_RS07740 PF00005 ABC transporter DA85_RS07740 PF02687 FtsX-like permease family DA85_RS07740 PF12704 MacB-like periplasmic core domain DA85_RS07745 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DA85_RS07750 PF00692 dUTPase DA85_RS07755 PF13404 AsnC-type helix-turn-helix domain DA85_RS07755 PF01037 Lrp/AsnC ligand binding domain DA85_RS07775 PF07690 Major Facilitator Superfamily DA85_RS07785 PF00709 Adenylosuccinate synthetase DA85_RS07795 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DA85_RS07795 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DA85_RS07795 PF01842 ACT domain DA85_RS07815 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DA85_RS07815 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DA85_RS07815 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DA85_RS07815 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DA85_RS07820 PF01434 Peptidase family M41 DA85_RS07820 PF06480 FtsH Extracellular DA85_RS07820 PF17862 AAA+ lid domain DA85_RS07820 PF00004 ATPase family associated with various cellular activities (AAA) DA85_RS07825 PF01171 PP-loop family DA85_RS07840 PF00691 OmpA family DA85_RS07845 PF07676 WD40-like Beta Propeller Repeat DA85_RS07845 PF04052 TolB amino-terminal domain DA85_RS07855 PF02472 Biopolymer transport protein ExbD/TolR DA85_RS07860 PF01618 MotA/TolQ/ExbB proton channel family DA85_RS07870 PF05496 Holliday junction DNA helicase RuvB P-loop domain DA85_RS07870 PF05491 RuvB C-terminal winged helix domain DA85_RS07870 PF17864 RuvB AAA lid domain DA85_RS07875 PF07499 RuvA, C-terminal domain DA85_RS07875 PF01330 RuvA N terminal domain DA85_RS07880 PF02075 Crossover junction endodeoxyribonuclease RuvC DA85_RS07905 PF01132 Elongation factor P (EF-P) OB domain DA85_RS07905 PF09285 Elongation factor P, C-terminal DA85_RS07905 PF08207 Elongation factor P (EF-P) KOW-like domain DA85_RS07910 PF00459 Inositol monophosphatase family DA85_RS07920 PF00691 OmpA family DA85_RS07920 PF01389 OmpA-like transmembrane domain DA85_RS07925 PF00664 ABC transporter transmembrane region DA85_RS07925 PF00005 ABC transporter DA85_RS07930 PF01197 Ribosomal protein L31 DA85_RS07935 PF01709 Transcriptional regulator DA85_RS07955 PF03741 Integral membrane protein TerC family DA85_RS07955 PF03471 Transporter associated domain DA85_RS07960 PF13277 YmdB-like protein DA85_RS07980 PF00456 Transketolase, thiamine diphosphate binding domain DA85_RS07980 PF02779 Transketolase, pyrimidine binding domain DA85_RS07980 PF02780 Transketolase, C-terminal domain DA85_RS07985 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DA85_RS07985 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DA85_RS07990 PF00162 Phosphoglycerate kinase DA85_RS08000 PF16177 Acetyl-coenzyme A synthetase N-terminus DA85_RS08000 PF13193 AMP-binding enzyme C-terminal domain DA85_RS08000 PF00501 AMP-binding enzyme DA85_RS08025 PF14765 Polyketide synthase dehydratase DA85_RS08025 PF00698 Acyl transferase domain DA85_RS08025 PF08240 Alcohol dehydrogenase GroES-like domain DA85_RS08025 PF00550 Phosphopantetheine attachment site DA85_RS08025 PF00109 Beta-ketoacyl synthase, N-terminal domain DA85_RS08025 PF02801 Beta-ketoacyl synthase, C-terminal domain DA85_RS08025 PF16197 Ketoacyl-synthetase C-terminal extension DA85_RS08025 PF08659 KR domain DA85_RS08050 PF00731 AIR carboxylase DA85_RS08055 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DA85_RS08055 PF02222 ATP-grasp domain DA85_RS08070 PF02887 Pyruvate kinase, alpha/beta domain DA85_RS08070 PF00224 Pyruvate kinase, barrel domain DA85_RS08085 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) DA85_RS08090 PF00005 ABC transporter DA85_RS08090 PF16326 ABC transporter C-terminal domain DA85_RS08105 PF01547 Bacterial extracellular solute-binding protein DA85_RS08110 PF00528 Binding-protein-dependent transport system inner membrane component DA85_RS08115 PF00005 ABC transporter DA85_RS08120 PF01435 Peptidase family M48 DA85_RS08125 PF03475 3-alpha domain DA85_RS08125 PF03473 MOSC domain DA85_RS08130 PF00140 Sigma-70 factor, region 1.2 DA85_RS08130 PF04545 Sigma-70, region 4 DA85_RS08130 PF04542 Sigma-70 region 2 DA85_RS08135 PF02559 CarD-like/TRCF domain DA85_RS08140 PF00037 4Fe-4S binding domain DA85_RS08140 PF11953 Domain of unknown function (DUF3470) DA85_RS08155 PF02803 Thiolase, C-terminal domain DA85_RS08155 PF00108 Thiolase, N-terminal domain DA85_RS08160 PF03928 Haem-degrading DA85_RS08165 PF01783 Ribosomal L32p protein family DA85_RS08170 PF00912 Transglycosylase DA85_RS08175 PF00348 Polyprenyl synthetase DA85_RS08180 PF04551 GcpE protein DA85_RS08190 PF07690 Major Facilitator Superfamily DA85_RS08195 PF00289 Biotin carboxylase, N-terminal domain DA85_RS08195 PF02436 Conserved carboxylase domain DA85_RS08195 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DA85_RS08195 PF00364 Biotin-requiring enzyme DA85_RS08195 PF00682 HMGL-like DA85_RS08195 PF02785 Biotin carboxylase C-terminal domain DA85_RS08200 PF13458 Periplasmic binding protein DA85_RS08205 PF13458 Periplasmic binding protein DA85_RS08215 PF00005 ABC transporter DA85_RS08220 PF00005 ABC transporter DA85_RS08225 PF00005 ABC transporter DA85_RS08225 PF12399 Branched-chain amino acid ATP-binding cassette transporter DA85_RS08230 PF02653 Branched-chain amino acid transport system / permease component DA85_RS08230 PF11862 Domain of unknown function (DUF3382) DA85_RS08235 PF02653 Branched-chain amino acid transport system / permease component DA85_RS08240 PF05544 Proline racemase DA85_RS08245 PF01266 FAD dependent oxidoreductase DA85_RS08255 PF01047 MarR family DA85_RS08260 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DA85_RS08265 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DA85_RS08265 PF02874 ATP synthase alpha/beta family, beta-barrel domain DA85_RS08270 PF00231 ATP synthase DA85_RS08275 PF00306 ATP synthase alpha/beta chain, C terminal domain DA85_RS08275 PF02874 ATP synthase alpha/beta family, beta-barrel domain DA85_RS08275 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DA85_RS08280 PF00213 ATP synthase delta (OSCP) subunit DA85_RS08290 PF17764 3′ DNA-binding domain (3′BD) DA85_RS08290 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DA85_RS08290 PF18074 Primosomal protein N C-terminal domain DA85_RS08290 PF00270 DEAD/DEAH box helicase DA85_RS08295 PF00923 Transaldolase/Fructose-6-phosphate aldolase DA85_RS08305 PF09334 tRNA synthetases class I (M) DA85_RS08305 PF13603 Leucyl-tRNA synthetase, Domain 2 DA85_RS08305 PF00133 tRNA synthetases class I (I, L, M and V) DA85_RS08305 PF08264 Anticodon-binding domain of tRNA DA85_RS08310 PF01168 Alanine racemase, N-terminal domain DA85_RS08320 PF06233 Usg-like family DA85_RS08325 PF00501 AMP-binding enzyme DA85_RS08325 PF13193 AMP-binding enzyme C-terminal domain DA85_RS08325 PF16177 Acetyl-coenzyme A synthetase N-terminus DA85_RS08335 PF01435 Peptidase family M48 DA85_RS08340 PF01189 16S rRNA methyltransferase RsmB/F DA85_RS08340 PF01029 NusB family DA85_RS08350 PF02142 MGS-like domain DA85_RS08350 PF01808 AICARFT/IMPCHase bienzyme DA85_RS08355 PF11700 Vacuole effluxer Atg22 like DA85_RS08360 PF05088 Bacterial NAD-glutamate dehydrogenase DA85_RS08370 PF04536 TPM domain DA85_RS08375 PF04011 LemA family DA85_RS08380 PF00886 Ribosomal protein S16 DA85_RS08385 PF01817 Chorismate mutase type II DA85_RS08385 PF02153 Prephenate dehydrogenase DA85_RS08390 PF00448 SRP54-type protein, GTPase domain DA85_RS08390 PF02978 Signal peptide binding domain DA85_RS08390 PF02881 SRP54-type protein, helical bundle domain DA85_RS08400 PF00484 Carbonic anhydrase DA85_RS08405 PF08543 Phosphomethylpyrimidine kinase DA85_RS08415 PF00171 Aldehyde dehydrogenase family DA85_RS08420 PF03466 LysR substrate binding domain DA85_RS08420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA85_RS08435 PF00293 NUDIX domain DA85_RS08440 PF03572 Peptidase family S41 DA85_RS08440 PF13180 PDZ domain DA85_RS08445 PF01551 Peptidase family M23 DA85_RS08455 PF02590 Predicted SPOUT methyltransferase DA85_RS08465 PF01467 Cytidylyltransferase-like DA85_RS08470 PF00171 Aldehyde dehydrogenase family DA85_RS08475 PF01472 PUA domain DA85_RS08475 PF00696 Amino acid kinase family DA85_RS08480 PF01018 GTP1/OBG DA85_RS08480 PF01926 50S ribosome-binding GTPase DA85_RS08500 PF01016 Ribosomal L27 protein DA85_RS08505 PF00829 Ribosomal prokaryotic L21 protein DA85_RS08515 PF13610 DDE domain DA85_RS08525 PF03591 AzlC protein DA85_RS08530 PF13610 DDE domain DA85_RS08580 PF01551 Peptidase family M23 DA85_RS08580 PF04225 Opacity-associated protein A LysM-like domain DA85_RS08585 PF01476 LysM domain DA85_RS08585 PF03734 L,D-transpeptidase catalytic domain DA85_RS08590 PF02861 Clp amino terminal domain, pathogenicity island component DA85_RS08590 PF17871 AAA lid domain DA85_RS08590 PF07724 AAA domain (Cdc48 subfamily) DA85_RS08590 PF00004 ATPase family associated with various cellular activities (AAA) DA85_RS08590 PF10431 C-terminal, D2-small domain, of ClpB protein DA85_RS08600 PF05175 Methyltransferase small domain DA85_RS08600 PF17827 PrmC N-terminal domain DA85_RS08605 PF00472 RF-1 domain DA85_RS08605 PF03462 PCRF domain DA85_RS08610 PF05524 PEP-utilising enzyme, N-terminal DA85_RS08610 PF01590 GAF domain DA85_RS08610 PF00391 PEP-utilising enzyme, mobile domain DA85_RS08610 PF02896 PEP-utilising enzyme, TIM barrel domain DA85_RS08615 PF13840 ACT domain DA85_RS08615 PF00696 Amino acid kinase family DA85_RS08615 PF01842 ACT domain DA85_RS08635 PF00795 Carbon-nitrogen hydrolase DA85_RS08640 PF00462 Glutaredoxin DA85_RS08650 PF08241 Methyltransferase domain DA85_RS08680 PF03900 Porphobilinogen deaminase, C-terminal domain DA85_RS08680 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DA85_RS08685 PF00814 Glycoprotease family DA85_RS08690 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DA85_RS08690 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DA85_RS08710 PF00892 EamA-like transporter family DA85_RS08715 PF00155 Aminotransferase class I and II DA85_RS08715 PF00392 Bacterial regulatory proteins, gntR family DA85_RS08720 PF17854 FtsK alpha domain DA85_RS08720 PF01580 FtsK/SpoIIIE family DA85_RS08720 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DA85_RS08720 PF09397 Ftsk gamma domain DA85_RS08725 PF00909 Ammonium Transporter Family DA85_RS08735 PF01494 FAD binding domain DA85_RS08745 PF13085 2Fe-2S iron-sulfur cluster binding domain DA85_RS08745 PF13237 4Fe-4S dicluster domain DA85_RS08750 PF02910 Fumarate reductase flavoprotein C-term DA85_RS08750 PF00890 FAD binding domain DA85_RS08760 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DA85_RS08770 PF00330 Aconitase family (aconitate hydratase) DA85_RS08775 PF01245 Ribosomal protein L19 DA85_RS08780 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DA85_RS08810 PF01746 tRNA (Guanine-1)-methyltransferase DA85_RS08815 PF01782 RimM N-terminal domain DA85_RS08815 PF05239 PRC-barrel domain DA85_RS08820 PF00589 Phage integrase family DA85_RS08820 PF02899 Phage integrase, N-terminal SAM-like domain DA85_RS08830 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA85_RS08830 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DA85_RS08840 PF01810 LysE type translocator DA85_RS08850 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DA85_RS08850 PF00364 Biotin-requiring enzyme DA85_RS08850 PF02817 e3 binding domain DA85_RS08855 PF02779 Transketolase, pyrimidine binding domain DA85_RS08855 PF16870 2-oxoglutarate dehydrogenase C-terminal DA85_RS08855 PF16078 2-oxoglutarate dehydrogenase N-terminus DA85_RS08855 PF00676 Dehydrogenase E1 component DA85_RS08860 PF02629 CoA binding domain DA85_RS08860 PF00549 CoA-ligase DA85_RS08865 PF00549 CoA-ligase DA85_RS08865 PF08442 ATP-grasp domain DA85_RS08870 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DA85_RS08870 PF00056 lactate/malate dehydrogenase, NAD binding domain DA85_RS08875 PF03969 AFG1-like ATPase DA85_RS08880 PF02974 Protease inhibitor Inh DA85_RS08885 PF01678 Diaminopimelate epimerase DA85_RS08890 PF00919 Uncharacterized protein family UPF0004 DA85_RS08890 PF04055 Radical SAM superfamily DA85_RS08895 PF02881 SRP54-type protein, helical bundle domain DA85_RS08895 PF00448 SRP54-type protein, GTPase domain DA85_RS08900 PF04279 Intracellular septation protein A DA85_RS08905 PF00753 Metallo-beta-lactamase superfamily DA85_RS08905 PF16123 Hydroxyacylglutathione hydrolase C-terminus DA85_RS08920 PF00293 NUDIX domain DA85_RS08930 PF01960 ArgJ family DA85_RS08935 PF00639 PPIC-type PPIASE domain DA85_RS08945 PF07516 SecA Wing and Scaffold domain DA85_RS08945 PF01043 SecA preprotein cross-linking domain DA85_RS08945 PF07517 SecA DEAD-like domain DA85_RS08945 PF02810 SEC-C motif DA85_RS08960 PF00884 Sulfatase DA85_RS08960 PF08019 Phosphoethanolamine transferase EptA/EptB DA85_RS08980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DA85_RS08980 PF03466 LysR substrate binding domain DA85_RS08985 PF00497 Bacterial extracellular solute-binding proteins, family 3 DA85_RS08990 PF00528 Binding-protein-dependent transport system inner membrane component DA85_RS08995 PF00528 Binding-protein-dependent transport system inner membrane component DA85_RS09000 PF00005 ABC transporter DA85_RS09005 PF00491 Arginase family DA85_RS09010 PF00206 Lyase DA85_RS09010 PF10415 Fumarase C C-terminus DA85_RS09015 PF00005 ABC transporter DA85_RS09020 PF17763 Glutaminase/Asparaginase C-terminal domain DA85_RS09020 PF00710 Asparaginase, N-terminal DA85_RS09025 PF00392 Bacterial regulatory proteins, gntR family DA85_RS09025 PF07729 FCD domain DA85_RS09030 PF17763 Glutaminase/Asparaginase C-terminal domain DA85_RS09030 PF00710 Asparaginase, N-terminal DA85_RS09035 PF07690 Major Facilitator Superfamily DA85_RS09040 PF01053 Cys/Met metabolism PLP-dependent enzyme DA85_RS09050 PF00291 Pyridoxal-phosphate dependent enzyme DA85_RS09055 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DA85_RS09055 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DA85_RS09060 PF01012 Electron transfer flavoprotein domain DA85_RS09060 PF00766 Electron transfer flavoprotein FAD-binding domain DA85_RS09065 PF01012 Electron transfer flavoprotein domain DA85_RS09070 PF06508 Queuosine biosynthesis protein QueC DA85_RS09075 PF01242 6-pyruvoyl tetrahydropterin synthase DA85_RS09080 PF04055 Radical SAM superfamily DA85_RS09085 PF01923 Cobalamin adenosyltransferase DA85_RS09095 PF00106 short chain dehydrogenase DA85_RS09105 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DA85_RS09110 PF08534 Redoxin DA85_RS09115 PF14698 Argininosuccinate lyase C-terminal DA85_RS09115 PF00206 Lyase DA85_RS09125 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DA85_RS09125 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DA85_RS09135 PF00156 Phosphoribosyl transferase domain DA85_RS09140 PF01209 ubiE/COQ5 methyltransferase family DA85_RS09145 PF00155 Aminotransferase class I and II DA85_RS09150 PF02153 Prephenate dehydrogenase DA85_RS09170 PF02325 YGGT family DA85_RS09175 PF00719 Inorganic pyrophosphatase DA85_RS09195 PF00005 ABC transporter DA85_RS09205 PF00230 Major intrinsic protein DA85_RS09210 PF03548 Outer membrane lipoprotein carrier protein LolA DA85_RS09225 PF00072 Response regulator receiver domain DA85_RS09225 PF00486 Transcriptional regulatory protein, C terminal DA85_RS09255 PF12951 Passenger-associated-transport-repeat DA85_RS09260 PF12951 Passenger-associated-transport-repeat DA85_RS09265 PF02592 Putative vitamin uptake transporter DA85_RS09270 PF00830 Ribosomal L28 family DA85_RS09280 PF13411 MerR HTH family regulatory protein DA85_RS09285 PF00403 Heavy-metal-associated domain DA85_RS09300 PF06213 Cobalamin biosynthesis protein CobT DA85_RS09300 PF11775 Cobalamin biosynthesis protein CobT VWA domain DA85_RS09305 PF12556 Cobaltochelatase CobS subunit N terminal DA85_RS09305 PF08406 CbbQ/NirQ/NorQ C-terminal DA85_RS09305 PF07728 AAA domain (dynein-related subfamily) DA85_RS09310 PF00226 DnaJ domain DA85_RS09315 PF01722 BolA-like protein DA85_RS09320 PF01595 Cyclin M transmembrane N-terminal domain DA85_RS09320 PF03471 Transporter associated domain DA85_RS09320 PF00571 CBS domain DA85_RS09325 PF01761 3-dehydroquinate synthase DA85_RS09330 PF01202 Shikimate kinase DA85_RS09340 PF02899 Phage integrase, N-terminal SAM-like domain DA85_RS09340 PF00589 Phage integrase family DA85_RS09345 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DA85_RS09360 PF07683 Cobalamin synthesis protein cobW C-terminal domain DA85_RS09360 PF02492 CobW/HypB/UreG, nucleotide-binding domain DA85_RS09365 PF00768 D-alanyl-D-alanine carboxypeptidase DA85_RS09365 PF07943 Penicillin-binding protein 5, C-terminal domain DA85_RS09370 PF07687 Peptidase dimerisation domain DA85_RS09370 PF01546 Peptidase family M20/M25/M40 DA85_RS09395 PF00732 GMC oxidoreductase DA85_RS09395 PF05199 GMC oxidoreductase DA85_RS09405 PF00732 GMC oxidoreductase DA85_RS09405 PF05199 GMC oxidoreductase DA85_RS09410 PF00171 Aldehyde dehydrogenase family DA85_RS09415 PF00378 Enoyl-CoA hydratase/isomerase DA85_RS09425 PF01144 Coenzyme A transferase DA85_RS09430 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DA85_RS09430 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DA85_RS09435 PF00356 Bacterial regulatory proteins, lacI family DA85_RS09445 PF00296 Luciferase-like monooxygenase DA85_RS09455 PF02653 Branched-chain amino acid transport system / permease component DA85_RS09460 PF00005 ABC transporter DA85_RS09470 PF02195 ParB-like nuclease domain DA85_RS09470 PF17762 HTH domain found in ParB protein DA85_RS09475 PF13614 AAA domain DA85_RS09480 PF02527 rRNA small subunit methyltransferase G DA85_RS09485 PF13932 GidA associated domain DA85_RS09485 PF01134 Glucose inhibited division protein A DA85_RS09490 PF01926 50S ribosome-binding GTPase DA85_RS09490 PF12631 MnmE helical domain DA85_RS09490 PF10396 GTP-binding protein TrmE N-terminus DA85_RS09495 PF03190 Protein of unknown function, DUF255 DA85_RS09500 PF07497 Rho termination factor, RNA-binding domain DA85_RS09500 PF07498 Rho termination factor, N-terminal domain DA85_RS09500 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DA85_RS09510 PF03653 Uncharacterised protein family (UPF0093) DA85_RS09515 PF01208 Uroporphyrinogen decarboxylase (URO-D) DA85_RS09520 PF03618 Kinase/pyrophosphorylase DA85_RS09525 PF02545 Maf-like protein DA85_RS09530 PF08501 Shikimate dehydrogenase substrate binding domain DA85_RS09530 PF01488 Shikimate / quinate 5-dehydrogenase DA85_RS09530 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DA85_RS09535 PF01121 Dephospho-CoA kinase DA85_RS09540 PF00929 Exonuclease DA85_RS09545 PF02556 Preprotein translocase subunit SecB DA85_RS09550 PF04186 FxsA cytoplasmic membrane protein DA85_RS09555 PF04280 Tim44-like domain DA85_RS09565 PF01713 Smr domain DA85_RS09570 PF01381 Helix-turn-helix DA85_RS09580 PF10431 C-terminal, D2-small domain, of ClpB protein DA85_RS09580 PF00004 ATPase family associated with various cellular activities (AAA) DA85_RS09580 PF07724 AAA domain (Cdc48 subfamily) DA85_RS09585 PF00227 Proteasome subunit DA85_RS09590 PF00475 Imidazoleglycerol-phosphate dehydratase DA85_RS09600 PF00117 Glutamine amidotransferase class-I DA85_RS09605 PF00977 Histidine biosynthesis protein DA85_RS09610 PF00977 Histidine biosynthesis protein DA85_RS09615 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DA85_RS09620 PF00485 Phosphoribulokinase / Uridine kinase family DA85_RS09625 PF00472 RF-1 domain DA85_RS09630 PF01293 Phosphoenolpyruvate carboxykinase DA85_RS09635 PF00486 Transcriptional regulatory protein, C terminal DA85_RS09635 PF00072 Response regulator receiver domain DA85_RS09640 PF00512 His Kinase A (phospho-acceptor) domain DA85_RS09640 PF13755 Sensor N-terminal transmembrane domain DA85_RS09640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA85_RS09640 PF13756 Stimulus-sensing domain DA85_RS09640 PF00672 HAMP domain DA85_RS09645 PF07475 HPr Serine kinase C-terminal domain DA85_RS09645 PF02603 HPr Serine kinase N terminus DA85_RS09650 PF03830 PTS system sorbose subfamily IIB component DA85_RS09650 PF03610 PTS system fructose IIA component DA85_RS09655 PF00381 PTS HPr component phosphorylation site DA85_RS09660 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DA85_RS09660 PF05221 S-adenosyl-L-homocysteine hydrolase DA85_RS09665 PF00512 His Kinase A (phospho-acceptor) domain DA85_RS09665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA85_RS09670 PF01636 Phosphotransferase enzyme family DA85_RS09675 PF12804 MobA-like NTP transferase domain DA85_RS09680 PF12705 PD-(D/E)XK nuclease superfamily DA85_RS09685 PF12705 PD-(D/E)XK nuclease superfamily DA85_RS09685 PF00580 UvrD/REP helicase N-terminal domain DA85_RS09685 PF13361 UvrD-like helicase C-terminal domain DA85_RS09690 PF00085 Thioredoxin DA85_RS09695 PF08245 Mur ligase middle domain DA85_RS09700 PF01039 Carboxyl transferase domain DA85_RS09705 PF00290 Tryptophan synthase alpha chain DA85_RS09715 PF00291 Pyridoxal-phosphate dependent enzyme DA85_RS09720 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DA85_RS09725 PF02698 DUF218 domain DA85_RS09740 PF03594 Benzoate membrane transport protein DA85_RS09755 PF00707 Translation initiation factor IF-3, C-terminal domain DA85_RS09755 PF05198 Translation initiation factor IF-3, N-terminal domain DA85_RS09760 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family DA85_RS09765 PF01632 Ribosomal protein L35 DA85_RS09770 PF00453 Ribosomal protein L20 DA85_RS09780 PF01409 tRNA synthetases class II core domain (F) DA85_RS09780 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DA85_RS09785 PF03483 B3/4 domain DA85_RS09785 PF03484 tRNA synthetase B5 domain DA85_RS09785 PF03147 Ferredoxin-fold anticodon binding domain DA85_RS09785 PF01588 Putative tRNA binding domain DA85_RS09785 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DA85_RS09790 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DA85_RS09790 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DA85_RS09795 PF00012 Hsp70 protein DA85_RS09800 PF01556 DnaJ C terminal domain DA85_RS09800 PF00684 DnaJ central domain DA85_RS09800 PF00226 DnaJ domain DA85_RS09805 PF13649 Methyltransferase domain DA85_RS09810 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DA85_RS09820 PF08450 SMP-30/Gluconolactonase/LRE-like region DA85_RS09825 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain DA85_RS09825 PF02951 Prokaryotic glutathione synthetase, N-terminal domain DA85_RS09830 PF01078 Magnesium chelatase, subunit ChlI DA85_RS09830 PF13335 Magnesium chelatase, subunit ChlI C-terminal DA85_RS09840 PF03330 Lytic transglycolase DA85_RS09845 PF04304 Protein of unknown function (DUF454) DA85_RS09850 PF12849 PBP superfamily domain DA85_RS09855 PF00528 Binding-protein-dependent transport system inner membrane component DA85_RS09860 PF00528 Binding-protein-dependent transport system inner membrane component DA85_RS09865 PF00005 ABC transporter DA85_RS09870 PF01895 PhoU domain DA85_RS09875 PF00486 Transcriptional regulatory protein, C terminal DA85_RS09875 PF00072 Response regulator receiver domain DA85_RS09880 PF07486 Cell Wall Hydrolase DA85_RS09890 PF02073 Thermophilic metalloprotease (M29) DA85_RS09895 PF00210 Ferritin-like domain DA85_RS09900 PF00814 Glycoprotease family DA85_RS09905 PF00583 Acetyltransferase (GNAT) family DA85_RS09910 PF01553 Acyltransferase DA85_RS09915 PF01938 TRAM domain DA85_RS09915 PF04055 Radical SAM superfamily DA85_RS09915 PF00919 Uncharacterized protein family UPF0004 DA85_RS09920 PF02562 PhoH-like protein DA85_RS09925 PF02130 Uncharacterized protein family UPF0054 DA85_RS09930 PF00571 CBS domain DA85_RS09930 PF03471 Transporter associated domain DA85_RS09935 PF00795 Carbon-nitrogen hydrolase DA85_RS09940 PF01381 Helix-turn-helix DA85_RS09945 PF00438 S-adenosylmethionine synthetase, N-terminal domain DA85_RS09945 PF02772 S-adenosylmethionine synthetase, central domain DA85_RS09945 PF02773 S-adenosylmethionine synthetase, C-terminal domain DA85_RS09950 PF02390 Putative methyltransferase DA85_RS09955 PF02576 RimP N-terminal domain DA85_RS09955 PF17384 RimP C-terminal SH3 domain DA85_RS09960 PF00575 S1 RNA binding domain DA85_RS09960 PF08529 NusA N-terminal domain DA85_RS09960 PF13184 NusA-like KH domain DA85_RS09970 PF04760 Translation initiation factor IF-2, N-terminal region DA85_RS09970 PF11987 Translation-initiation factor 2 DA85_RS09970 PF00009 Elongation factor Tu GTP binding domain DA85_RS09970 PF08364 Bacterial translation initiation factor IF-2 associated region DA85_RS09975 PF02033 Ribosome-binding factor A DA85_RS09980 PF09157 Pseudouridine synthase II TruB, C-terminal DA85_RS09980 PF01509 TruB family pseudouridylate synthase (N terminal domain) DA85_RS09980 PF16198 tRNA pseudouridylate synthase B C-terminal domain DA85_RS09985 PF00312 Ribosomal protein S15 DA85_RS09990 PF00575 S1 RNA binding domain DA85_RS09990 PF03725 3' exoribonuclease family, domain 2 DA85_RS09990 PF01138 3' exoribonuclease family, domain 1 DA85_RS09990 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DA85_RS09990 PF00013 KH domain DA85_RS09995 PF08468 Methyltransferase small domain N-terminal DA85_RS09995 PF05175 Methyltransferase small domain DA85_RS10005 PF02801 Beta-ketoacyl synthase, C-terminal domain DA85_RS10005 PF00109 Beta-ketoacyl synthase, N-terminal domain DA85_RS10010 PF07977 FabA-like domain DA85_RS10015 PF01475 Ferric uptake regulator family DA85_RS10020 PF03180 NLPA lipoprotein DA85_RS10030 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DA85_RS10030 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DA85_RS10035 PF00561 alpha/beta hydrolase fold DA85_RS10040 PF00877 NlpC/P60 family DA85_RS10050 PF02789 Cytosol aminopeptidase family, N-terminal domain DA85_RS10050 PF00883 Cytosol aminopeptidase family, catalytic domain DA85_RS10060 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DA85_RS10060 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DA85_RS10060 PF06827 Zinc finger found in FPG and IleRS DA85_RS10065 PF00378 Enoyl-CoA hydratase/isomerase DA85_RS10075 PF01649 Ribosomal protein S20 DA85_RS10305 PF09297 NADH pyrophosphatase zinc ribbon domain DA85_RS10305 PF00293 NUDIX domain DA85_RS10400 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DA85_RS10400 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DA85_RS10400 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DA85_RS10400 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DA85_RS10435 PF01336 OB-fold nucleic acid binding domain DA85_RS10435 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DA85_RS10435 PF14579 Helix-hairpin-helix motif DA85_RS10435 PF02811 PHP domain DA85_RS10435 PF07733 Bacterial DNA polymerase III alpha NTPase domain DA85_RS10440 PF02811 PHP domain DA85_RS10440 PF01336 OB-fold nucleic acid binding domain DA85_RS10440 PF14579 Helix-hairpin-helix motif DA85_RS10440 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DA85_RS10440 PF07733 Bacterial DNA polymerase III alpha NTPase domain DA85_RS10630 PF06165 Glycosyltransferase family 36 DA85_RS10630 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain DA85_RS10630 PF10091 Putative glucoamylase DA85_RS10635 PF10091 Putative glucoamylase DA85_RS10635 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain DA85_RS10635 PF06165 Glycosyltransferase family 36 DA85_RS11070 PF00202 Aminotransferase class-III DA85_RS11265 PF01266 FAD dependent oxidoreductase DA85_RS11530 PF00873 AcrB/AcrD/AcrF family DA85_RS11535 PF00873 AcrB/AcrD/AcrF family DA85_RS11545 PF00873 AcrB/AcrD/AcrF family DA85_RS11630 PF01554 MatE DA85_RS11775 PF03480 Bacterial extracellular solute-binding protein, family 7 DA85_RS12665 PF13407 Periplasmic binding protein domain DA85_RS12715 PF00171 Aldehyde dehydrogenase family DA85_RS12965 PF03710 Glutamate-ammonia ligase adenylyltransferase DA85_RS12965 PF08335 GlnD PII-uridylyltransferase DA85_RS12970 PF08335 GlnD PII-uridylyltransferase DA85_RS12970 PF03710 Glutamate-ammonia ligase adenylyltransferase DA85_RS13315 PF00005 ABC transporter DA85_RS13315 PF12848 ABC transporter DA85_RS13575 PF03989 DNA gyrase C-terminal domain, beta-propeller DA85_RS13575 PF00521 DNA gyrase/topoisomerase IV, subunit A DA85_RS13910 PF00586 AIR synthase related protein, N-terminal domain DA85_RS13910 PF02769 AIR synthase related protein, C-terminal domain DA85_RS13910 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DA85_RS14155 PF02355 Protein export membrane protein DA85_RS14155 PF07549 SecD/SecF GG Motif DA85_RS14330 PF01458 Uncharacterized protein family (UPF0051) DA85_RS14800 PF00072 Response regulator receiver domain DA85_RS14800 PF13188 PAS domain DA85_RS14800 PF08448 PAS fold DA85_RS14800 PF00512 His Kinase A (phospho-acceptor) domain DA85_RS14800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DA85_RS15150 PF17755 UvrA DNA-binding domain DA85_RS15150 PF17760 UvrA interaction domain DA85_RS15205 PF02080 TrkA-C domain DA85_RS15205 PF02254 TrkA-N domain DA85_RS15250 PF02542 YgbB family DA85_RS15250 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DA85_RS15280 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA85_RS15280 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DA85_RS15285 PF07992 Pyridine nucleotide-disulphide oxidoreductase DA85_RS15285 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DA85_RS15485 PF03315 Serine dehydratase beta chain DA85_RS15485 PF03313 Serine dehydratase alpha chain