DA85_RS00005 SM00382 ATPases associated with a variety of cellular activities DA85_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain DA85_RS00010 SM00480 DNA polymerase III beta subunit DA85_RS00015 SM00382 ATPases associated with a variety of cellular activities DA85_RS00030 SM00382 ATPases associated with a variety of cellular activities DA85_RS00080 SM00878 Biotin carboxylase C-terminal domain DA85_RS00100 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. DA85_RS00130 SM00316 Ribosomal protein S1-like RNA-binding domain DA85_RS00155 SM00493 DA85_RS00155 DA85_RS00165 SM00382 ATPases associated with a variety of cellular activities DA85_RS00325 SM00481 DNA polymerase alpha chain like domain DA85_RS00405 SM00382 ATPases associated with a variety of cellular activities DA85_RS00440 SM00382 ATPases associated with a variety of cellular activities DA85_RS00475 SM00448 cheY-homologous receiver domain DA85_RS00515 SM00382 ATPases associated with a variety of cellular activities DA85_RS00520 SM01068 Putative carbohydrate binding domain DA85_RS00565 SM00474 3'-5' exonuclease DA85_RS00575 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs DA85_RS00575 SM00474 3'-5' exonuclease DA85_RS00575 SM00475 5'-3' exonuclease DA85_RS00575 SM00479 DA85_RS00575 DA85_RS00575 SM00482 DNA polymerase A domain DA85_RS00580 SM00487 DEAD-like helicases superfamily DA85_RS00580 SM00490 helicase superfamily c-terminal domain DA85_RS00585 SM00387 Histidine kinase-like ATPases DA85_RS00585 SM00433 TopoisomeraseII DA85_RS00605 SM00829 Enoylreductase DA85_RS00615 SM00487 DEAD-like helicases superfamily DA85_RS00615 SM00490 helicase superfamily c-terminal domain DA85_RS00615 SM00847 Helicase associated domain (HA2) Add an annotation DA85_RS00625 SM00387 Histidine kinase-like ATPases DA85_RS00625 SM00388 His Kinase A (phosphoacceptor) domain DA85_RS00640 SM00448 cheY-homologous receiver domain DA85_RS00655 SM00932 Scaffold protein Nfu/NifU N terminal DA85_RS00675 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DA85_RS00690 SM00533 DNA-binding domain of DNA mismatch repair MUTS family DA85_RS00690 SM00534 ATPase domain of DNA mismatch repair MUTS family DA85_RS00705 SM00967 RNA 2'-O ribose methyltransferase substrate binding DA85_RS00720 SM00411 bacterial (prokaryotic) histone like domain DA85_RS00740 SM00382 ATPases associated with a variety of cellular activities DA85_RS00775 SM00478 endonuclease III DA85_RS00775 SM00525 DA85_RS00775 DA85_RS00820 SM00729 Elongator protein 3, MiaB family, Radical SAM DA85_RS00860 SM00886 Stress responsive A/B Barrel Domain DA85_RS00880 SM01018 B12 binding domain DA85_RS00885 SM00421 helix_turn_helix, Lux Regulon DA85_RS00915 SM00419 helix_turn_helix, cAMP Regulatory protein DA85_RS00920 SM00421 helix_turn_helix, Lux Regulon DA85_RS00930 SM00420 helix_turn_helix, Deoxyribose operon repressor DA85_RS00930 SM01134 DA85_RS00930 DA85_RS00950 SM00829 Enoylreductase DA85_RS01020 SM00052 Putative diguanylate phosphodiesterase DA85_RS01020 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DA85_RS01020 SM00091 PAS domain DA85_RS01020 SM00267 diguanylate cyclase DA85_RS01030 SM00422 helix_turn_helix, mercury resistance DA85_RS01040 SM00382 ATPases associated with a variety of cellular activities DA85_RS01060 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DA85_RS01090 SM00346 helix_turn_helix isocitrate lyase regulation DA85_RS01110 SM00382 ATPases associated with a variety of cellular activities DA85_RS01115 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DA85_RS01145 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DA85_RS01180 SM00316 Ribosomal protein S1-like RNA-binding domain DA85_RS01185 SM00226 Low molecular weight phosphatase family DA85_RS01225 SM01040 BRO family, N-terminal domain DA85_RS01230 SM00857 Resolvase, N terminal domain DA85_RS01280 SM00988 UreE urease accessory protein, N-terminal domain DA85_RS01300 SM00387 Histidine kinase-like ATPases DA85_RS01395 SM00062 Bacterial periplasmic substrate-binding proteins DA85_RS01410 SM00387 Histidine kinase-like ATPases DA85_RS01410 SM00388 His Kinase A (phosphoacceptor) domain DA85_RS01455 SM00342 helix_turn_helix, arabinose operon control protein DA85_RS01495 SM00421 helix_turn_helix, Lux Regulon DA85_RS01495 SM00448 cheY-homologous receiver domain DA85_RS01500 SM00387 Histidine kinase-like ATPases DA85_RS01500 SM00388 His Kinase A (phosphoacceptor) domain DA85_RS01500 SM00448 cheY-homologous receiver domain DA85_RS01600 SM00421 helix_turn_helix, Lux Regulon DA85_RS01600 SM00448 cheY-homologous receiver domain DA85_RS01635 SM01092 CO dehydrogenase flavoprotein C-terminal domain DA85_RS01640 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DA85_RS01725 SM00342 helix_turn_helix, arabinose operon control protein DA85_RS01810 SM00729 Elongator protein 3, MiaB family, Radical SAM DA85_RS01865 SM00028 Tetratricopeptide repeats DA85_RS01920 SM00267 diguanylate cyclase DA85_RS01925 SM01209 DA85_RS01925 DA85_RS01925 SM01210 DA85_RS01925 DA85_RS01945 SM00271 DnaJ molecular chaperone homology domain DA85_RS01960 SM00357 Cold shock protein domain DA85_RS02025 SM00861 Transketolase, pyrimidine binding domain DA85_RS02030 SM00363 S4 RNA-binding domain DA85_RS02050 SM00257 Lysin motif DA85_RS02055 SM00382 ATPases associated with a variety of cellular activities DA85_RS02085 SM00382 ATPases associated with a variety of cellular activities DA85_RS02090 SM00382 ATPases associated with a variety of cellular activities DA85_RS02120 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. DA85_RS02125 SM00822 DA85_RS02125 DA85_RS02130 SM00823 Phosphopantetheine attachment site DA85_RS02135 SM00825 Beta-ketoacyl synthase DA85_RS02150 SM00072 Guanylate kinase homologues. DA85_RS02235 SM00052 Putative diguanylate phosphodiesterase DA85_RS02235 SM00267 diguanylate cyclase DA85_RS02260 SM00052 Putative diguanylate phosphodiesterase DA85_RS02290 SM00478 endonuclease III DA85_RS02290 SM00525 DA85_RS02290 DA85_RS02305 SM00968 SMC proteins Flexible Hinge Domain DA85_RS02340 SM00849 Metallo-beta-lactamase superfamily DA85_RS02415 SM00382 ATPases associated with a variety of cellular activities DA85_RS02495 SM00382 ATPases associated with a variety of cellular activities DA85_RS02530 SM00354 helix_turn _helix lactose operon repressor DA85_RS02535 SM00342 helix_turn_helix, arabinose operon control protein DA85_RS02570 SM00966 SpoVT / AbrB like domain DA85_RS02580 SM00345 helix_turn_helix gluconate operon transcriptional repressor DA85_RS02580 SM00895 DA85_RS02580 DA85_RS02635 SM00760 Bacterial dnaA protein helix-turn-helix domain DA85_RS02660 SM00387 Histidine kinase-like ATPases DA85_RS02660 SM00388 His Kinase A (phosphoacceptor) domain DA85_RS02790 SM00448 cheY-homologous receiver domain DA85_RS02790 SM00862 Transcriptional regulatory protein, C terminal DA85_RS02795 SM00387 Histidine kinase-like ATPases DA85_RS02825 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DA85_RS02830 SM00448 cheY-homologous receiver domain DA85_RS02830 SM00862 Transcriptional regulatory protein, C terminal DA85_RS02835 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DA85_RS02835 SM00387 Histidine kinase-like ATPases DA85_RS02835 SM00388 His Kinase A (phosphoacceptor) domain DA85_RS02850 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DA85_RS02850 SM00387 Histidine kinase-like ATPases DA85_RS02850 SM00388 His Kinase A (phosphoacceptor) domain DA85_RS02870 SM00986 Uracil DNA glycosylase superfamily DA85_RS02870 SM00987 UreE urease accessory protein, C-terminal domain DA85_RS02980 SM01130 DA85_RS02980 DA85_RS02990 SM00986 Uracil DNA glycosylase superfamily DA85_RS02990 SM00987 UreE urease accessory protein, C-terminal domain DA85_RS03000 SM01409 DA85_RS03000 DA85_RS03005 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DA85_RS03005 SM00954 Region found in RelA / SpoT proteins DA85_RS03015 SM00100 Cyclic nucleotide-monophosphate binding domain DA85_RS03015 SM00419 helix_turn_helix, cAMP Regulatory protein DA85_RS03020 SM00729 Elongator protein 3, MiaB family, Radical SAM DA85_RS03030 SM00342 helix_turn_helix, arabinose operon control protein DA85_RS03050 SM00358 Double-stranded RNA binding motif DA85_RS03050 SM00535 Ribonuclease III family DA85_RS03125 SM00917 LeuA allosteric (dimerisation) domain DA85_RS03140 SM00650 Ribosomal RNA adenine dimethylases DA85_RS03185 SM00382 ATPases associated with a variety of cellular activities DA85_RS03195 SM00562 DA85_RS03195 DA85_RS03220 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DA85_RS03220 SM00465 GIY-YIG type nucleases (URI domain) DA85_RS03260 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DA85_RS03335 SM00479 DA85_RS03335 DA85_RS03350 SM00530 Helix-turn-helix XRE-family like proteins DA85_RS03400 SM00287 Bacterial SH3 domain homologues DA85_RS03420 SM00014 Acid phosphatase homologues DA85_RS03425 SM00062 Bacterial periplasmic substrate-binding proteins DA85_RS03440 SM00382 ATPases associated with a variety of cellular activities DA85_RS03465 SM00341 Helicase and RNase D C-terminal DA85_RS03465 SM00474 3'-5' exonuclease DA85_RS03480 SM00434 DNA Topoisomerase IV DA85_RS03495 SM01004 Delta-aminolevulinic acid dehydratase DA85_RS03510 SM00347 helix_turn_helix multiple antibiotic resistance protein DA85_RS03580 SM00411 bacterial (prokaryotic) histone like domain DA85_RS03585 SM00422 helix_turn_helix, mercury resistance DA85_RS03630 SM00859 Semialdehyde dehydrogenase, NAD binding domain DA85_RS03725 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DA85_RS03730 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DA85_RS03775 SM00849 Metallo-beta-lactamase superfamily DA85_RS03800 SM00382 ATPases associated with a variety of cellular activities DA85_RS03805 SM00481 DNA polymerase alpha chain like domain DA85_RS03825 SM00363 S4 RNA-binding domain DA85_RS03825 SM01390 DA85_RS03825 DA85_RS03870 SM01211 DA85_RS03870 DA85_RS03905 SM00998 Adenylosuccinate lyase C-terminus DA85_RS03920 SM00829 Enoylreductase DA85_RS03925 SM00825 Beta-ketoacyl synthase DA85_RS04000 SM00344 helix_turn_helix ASNC type DA85_RS04005 SM00986 Uracil DNA glycosylase superfamily DA85_RS04005 SM00987 UreE urease accessory protein, C-terminal domain DA85_RS04010 SM00318 Staphylococcal nuclease homologues DA85_RS04015 SM00671 Sel1-like repeats. DA85_RS04035 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DA85_RS04040 SM00836 DALR anticodon binding domain DA85_RS04040 SM01016 Arginyl tRNA synthetase N terminal dom DA85_RS04100 SM00257 Lysin motif DA85_RS04110 SM01323 DA85_RS04110 DA85_RS04160 SM00845 GatB domain DA85_RS04185 SM00878 Biotin carboxylase C-terminal domain DA85_RS04230 SM00646 DA85_RS04230 DA85_RS04240 SM00937 DA85_RS04240 DA85_RS04300 SM00382 ATPases associated with a variety of cellular activities DA85_RS04335 SM00487 DEAD-like helicases superfamily DA85_RS04335 SM00490 helicase superfamily c-terminal domain DA85_RS04405 SM00062 Bacterial periplasmic substrate-binding proteins DA85_RS04405 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. DA85_RS04420 SM00729 Elongator protein 3, MiaB family, Radical SAM DA85_RS04585 SM00936 Penicillin-binding protein 5, C-terminal domain DA85_RS04610 SM00849 Metallo-beta-lactamase superfamily DA85_RS04615 SM00382 ATPases associated with a variety of cellular activities DA85_RS04640 SM01230 DA85_RS04640 DA85_RS04645 SM00938 Nitrogen regulatory protein P-II DA85_RS04705 SM00919 Malic enzyme, NAD binding domain DA85_RS04705 SM01274 DA85_RS04705 DA85_RS04710 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DA85_RS04720 SM00382 ATPases associated with a variety of cellular activities DA85_RS04760 SM00905 Dihydroneopterin aldolase DA85_RS04800 SM00091 PAS domain DA85_RS04800 SM00387 Histidine kinase-like ATPases DA85_RS04800 SM00388 His Kinase A (phosphoacceptor) domain DA85_RS04800 SM00448 cheY-homologous receiver domain DA85_RS04840 SM00852 Probable molybdopterin binding domain DA85_RS04860 SM00487 DEAD-like helicases superfamily DA85_RS04860 SM00490 helicase superfamily c-terminal domain DA85_RS04870 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DA85_RS04875 SM00450 Rhodanese Homology Domain DA85_RS04885 SM00267 diguanylate cyclase DA85_RS04915 SM00028 Tetratricopeptide repeats DA85_RS04935 SM00903 Flavin reductase like domain DA85_RS04950 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DA85_RS04960 SM01234 DA85_RS04960 DA85_RS05015 SM00857 Resolvase, N terminal domain DA85_RS05025 SM01040 BRO family, N-terminal domain DA85_RS05100 SM00434 DNA Topoisomerase IV DA85_RS05110 SM00072 Guanylate kinase homologues. DA85_RS05115 SM00345 helix_turn_helix gluconate operon transcriptional repressor DA85_RS05115 SM00866 DA85_RS05115 DA85_RS05130 SM00411 bacterial (prokaryotic) histone like domain DA85_RS05135 SM00382 ATPases associated with a variety of cellular activities DA85_RS05135 SM00464 Found in ATP-dependent protease La (LON) DA85_RS05140 SM00382 ATPases associated with a variety of cellular activities DA85_RS05140 SM00994 ClpX C4-type zinc finger DA85_RS05140 SM01086 C-terminal, D2-small domain, of ClpB protein DA85_RS05170 SM00382 ATPases associated with a variety of cellular activities DA85_RS05170 SM00448 cheY-homologous receiver domain DA85_RS05175 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DA85_RS05175 SM00387 Histidine kinase-like ATPases DA85_RS05175 SM00388 His Kinase A (phosphoacceptor) domain DA85_RS05180 SM00382 ATPases associated with a variety of cellular activities DA85_RS05180 SM00448 cheY-homologous receiver domain DA85_RS05185 SM00387 Histidine kinase-like ATPases DA85_RS05185 SM00388 His Kinase A (phosphoacceptor) domain DA85_RS05205 SM00822 DA85_RS05205 DA85_RS05215 SM00729 Elongator protein 3, MiaB family, Radical SAM DA85_RS05235 SM00861 Transketolase, pyrimidine binding domain DA85_RS05255 SM01192 DA85_RS05255 DA85_RS05255 SM01193 DA85_RS05255 DA85_RS05305 SM00852 Probable molybdopterin binding domain DA85_RS05360 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DA85_RS05425 SM00382 ATPases associated with a variety of cellular activities DA85_RS05425 SM01086 C-terminal, D2-small domain, of ClpB protein DA85_RS05465 SM00422 helix_turn_helix, mercury resistance DA85_RS05500 SM00530 Helix-turn-helix XRE-family like proteins DA85_RS05510 SM00878 Biotin carboxylase C-terminal domain DA85_RS05555 SM01329 DA85_RS05555 DA85_RS05560 SM00098 Alkaline phosphatase homologues DA85_RS05565 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DA85_RS05570 SM00382 ATPases associated with a variety of cellular activities DA85_RS05585 SM00382 ATPases associated with a variety of cellular activities DA85_RS05590 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DA85_RS05600 SM00662 RNA polymerases D DA85_RS05665 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. DA85_RS05670 SM01374 DA85_RS05670 DA85_RS05690 SM00322 K homology RNA-binding domain DA85_RS05705 SM01382 DA85_RS05705 DA85_RS05705 SM01383 DA85_RS05705 DA85_RS05725 SM01403 DA85_RS05725 DA85_RS05735 SM00838 Elongation factor G C-terminus DA85_RS05735 SM00889 Elongation factor G, domain IV DA85_RS05755 SM00663 RNA polymerase I subunit A N-terminus DA85_RS05780 SM00649 Ribosomal protein L11/L12 DA85_RS05785 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. DA85_RS05785 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. DA85_RS05815 SM00967 RNA 2'-O ribose methyltransferase substrate binding DA85_RS05820 SM00116 Domain in cystathionine beta-synthase and other proteins. DA85_RS05850 SM00971 Serine acetyltransferase, N-terminal DA85_RS05865 SM00357 Cold shock protein domain DA85_RS05875 SM00978 DA85_RS05875 DA85_RS05985 SM00903 Flavin reductase like domain DA85_RS06060 SM00833 Cobalamin synthesis protein cobW C-terminal domain DA85_RS06105 SM00342 helix_turn_helix, arabinose operon control protein DA85_RS06175 SM01091 Transporter associated domain DA85_RS06200 SM00822 DA85_RS06200 DA85_RS06205 SM00382 ATPases associated with a variety of cellular activities DA85_RS06225 SM00382 ATPases associated with a variety of cellular activities DA85_RS06250 SM00382 ATPases associated with a variety of cellular activities DA85_RS06280 SM00988 UreE urease accessory protein, N-terminal domain DA85_RS06325 SM00382 ATPases associated with a variety of cellular activities DA85_RS06435 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DA85_RS06445 SM00244 prohibitin homologues DA85_RS06450 SM00244 prohibitin homologues DA85_RS06560 SM00292 breast cancer carboxy-terminal domain DA85_RS06560 SM00532 Ligase N family DA85_RS06580 SM00864 Tubulin/FtsZ family, GTPase domain DA85_RS06580 SM00865 Tubulin/FtsZ family, C-terminal domain DA85_RS06585 SM00842 Cell division protein FtsA DA85_RS06665 SM00644 DA85_RS06665 DA85_RS06670 SM00271 DnaJ molecular chaperone homology domain DA85_RS06680 SM00641 Glycosyl hydrolases family 25 DA85_RS06700 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DA85_RS06720 SM00382 ATPases associated with a variety of cellular activities DA85_RS06845 SM00400 zinc finger DA85_RS06845 SM00493 DA85_RS06845 DA85_RS06860 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain DA85_RS06875 SM00850 LytTr DNA-binding domain DA85_RS06880 SM00851 MGS-like domain DA85_RS06880 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DA85_RS06895 SM00357 Cold shock protein domain DA85_RS06930 SM00344 helix_turn_helix ASNC type DA85_RS06970 SM00287 Bacterial SH3 domain homologues DA85_RS06975 SM00487 DEAD-like helicases superfamily DA85_RS06975 SM00490 helicase superfamily c-terminal domain DA85_RS06985 SM00357 Cold shock protein domain DA85_RS06995 SM00849 Metallo-beta-lactamase superfamily DA85_RS07010 SM00347 helix_turn_helix multiple antibiotic resistance protein DA85_RS07015 SM00448 cheY-homologous receiver domain DA85_RS07015 SM00862 Transcriptional regulatory protein, C terminal DA85_RS07020 SM00387 Histidine kinase-like ATPases DA85_RS07075 SM01400 DA85_RS07075 DA85_RS07135 SM00382 ATPases associated with a variety of cellular activities DA85_RS07140 SM00382 ATPases associated with a variety of cellular activities DA85_RS07195 SM00382 ATPases associated with a variety of cellular activities DA85_RS07240 SM00917 LeuA allosteric (dimerisation) domain DA85_RS07260 SM00344 helix_turn_helix ASNC type DA85_RS07265 SM00347 helix_turn_helix multiple antibiotic resistance protein DA85_RS07295 SM00382 ATPases associated with a variety of cellular activities DA85_RS07300 SM00382 ATPases associated with a variety of cellular activities DA85_RS07305 SM00382 ATPases associated with a variety of cellular activities DA85_RS07340 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DA85_RS07385 SM00448 cheY-homologous receiver domain DA85_RS07385 SM00862 Transcriptional regulatory protein, C terminal DA85_RS07420 SM00091 PAS domain DA85_RS07420 SM00387 Histidine kinase-like ATPases DA85_RS07420 SM00388 His Kinase A (phosphoacceptor) domain DA85_RS07440 SM00382 ATPases associated with a variety of cellular activities DA85_RS07450 SM00530 Helix-turn-helix XRE-family like proteins DA85_RS07510 SM01120 DA85_RS07510 DA85_RS07520 SM01120 DA85_RS07520 DA85_RS07600 SM00346 helix_turn_helix isocitrate lyase regulation DA85_RS07620 SM00507 HNH nucleases DA85_RS07625 SM00478 endonuclease III DA85_RS07650 SM00363 S4 RNA-binding domain DA85_RS07670 SM00911 HWE histidine kinase DA85_RS07680 SM00448 cheY-homologous receiver domain DA85_RS07695 SM00387 Histidine kinase-like ATPases DA85_RS07740 SM00382 ATPases associated with a variety of cellular activities DA85_RS07755 SM00344 helix_turn_helix ASNC type DA85_RS07785 SM00788 Adenylosuccinate synthetase DA85_RS07820 SM00382 ATPases associated with a variety of cellular activities DA85_RS07870 SM00382 ATPases associated with a variety of cellular activities DA85_RS07875 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DA85_RS07900 SM00671 Sel1-like repeats. DA85_RS07905 SM00841 Elongation factor P, C-terminal DA85_RS07905 SM01185 DA85_RS07905 DA85_RS07925 SM00382 ATPases associated with a variety of cellular activities DA85_RS07980 SM00861 Transketolase, pyrimidine binding domain DA85_RS07985 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DA85_RS08025 SM00829 Enoylreductase DA85_RS08050 SM01001 AIR carboxylase DA85_RS08065 SM00028 Tetratricopeptide repeats DA85_RS08090 SM00382 ATPases associated with a variety of cellular activities DA85_RS08100 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain DA85_RS08115 SM00382 ATPases associated with a variety of cellular activities DA85_RS08135 SM01058 CarD-like/TRCF domain DA85_RS08145 SM00363 S4 RNA-binding domain DA85_RS08150 SM00490 helicase superfamily c-terminal domain DA85_RS08195 SM00878 Biotin carboxylase C-terminal domain DA85_RS08225 SM00382 ATPases associated with a variety of cellular activities DA85_RS08255 SM00347 helix_turn_helix multiple antibiotic resistance protein DA85_RS08265 SM00382 ATPases associated with a variety of cellular activities DA85_RS08290 SM00487 DEAD-like helicases superfamily DA85_RS08290 SM00490 helicase superfamily c-terminal domain DA85_RS08350 SM00798 AICARFT/IMPCHase bienzyme DA85_RS08350 SM00851 MGS-like domain DA85_RS08385 SM00830 Chorismate mutase type II DA85_RS08390 SM00382 ATPases associated with a variety of cellular activities DA85_RS08390 SM00962 SRP54-type protein, GTPase domain DA85_RS08390 SM00963 SRP54-type protein, helical bundle domain DA85_RS08400 SM00947 Carbonic anhydrase DA85_RS08440 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DA85_RS08440 SM00245 tail specific protease DA85_RS08475 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase DA85_RS08520 SM00530 Helix-turn-helix XRE-family like proteins DA85_RS08590 SM00382 ATPases associated with a variety of cellular activities DA85_RS08590 SM01086 C-terminal, D2-small domain, of ClpB protein DA85_RS08605 SM00937 DA85_RS08605 DA85_RS08610 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DA85_RS08715 SM00345 helix_turn_helix gluconate operon transcriptional repressor DA85_RS08720 SM00382 ATPases associated with a variety of cellular activities DA85_RS08720 SM00843 DA85_RS08720 DA85_RS08805 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DA85_RS08855 SM00861 Transketolase, pyrimidine binding domain DA85_RS08860 SM00881 CoA binding domain DA85_RS08890 SM00729 Elongator protein 3, MiaB family, Radical SAM DA85_RS08895 SM00382 ATPases associated with a variety of cellular activities DA85_RS08895 SM00962 SRP54-type protein, GTPase domain DA85_RS08895 SM00963 SRP54-type protein, helical bundle domain DA85_RS08905 SM00849 Metallo-beta-lactamase superfamily DA85_RS08945 SM00957 SecA DEAD-like domain DA85_RS08945 SM00958 SecA preprotein cross-linking domain DA85_RS08985 SM00062 Bacterial periplasmic substrate-binding proteins DA85_RS09000 SM00382 ATPases associated with a variety of cellular activities DA85_RS09015 SM00382 ATPases associated with a variety of cellular activities DA85_RS09020 SM00870 DA85_RS09020 DA85_RS09025 SM00345 helix_turn_helix gluconate operon transcriptional repressor DA85_RS09025 SM00895 DA85_RS09025 DA85_RS09030 SM00870 DA85_RS09030 DA85_RS09060 SM00893 Electron transfer flavoprotein domain DA85_RS09065 SM00893 Electron transfer flavoprotein domain DA85_RS09180 SM00563 Phosphate acyltransferases DA85_RS09195 SM00382 ATPases associated with a variety of cellular activities DA85_RS09220 SM00100 Cyclic nucleotide-monophosphate binding domain DA85_RS09225 SM00448 cheY-homologous receiver domain DA85_RS09225 SM00862 Transcriptional regulatory protein, C terminal DA85_RS09260 SM00869 Autotransporter beta-domain DA85_RS09280 SM00422 helix_turn_helix, mercury resistance DA85_RS09300 SM00327 von Willebrand factor (vWF) type A domain DA85_RS09310 SM00271 DnaJ molecular chaperone homology domain DA85_RS09320 SM00116 Domain in cystathionine beta-synthase and other proteins. DA85_RS09320 SM01091 Transporter associated domain DA85_RS09360 SM00833 Cobalamin synthesis protein cobW C-terminal domain DA85_RS09425 SM00882 Coenzyme A transferase DA85_RS09435 SM00354 helix_turn _helix lactose operon repressor DA85_RS09460 SM00382 ATPases associated with a variety of cellular activities DA85_RS09470 SM00470 ParB-like nuclease domain DA85_RS09485 SM01228 DA85_RS09485 DA85_RS09500 SM00357 Cold shock protein domain DA85_RS09500 SM00382 ATPases associated with a variety of cellular activities DA85_RS09500 SM00959 Rho termination factor, N-terminal domain DA85_RS09540 SM00479 DA85_RS09540 DA85_RS09555 SM00978 DA85_RS09555 DA85_RS09560 SM00925 MltA specific insert domain DA85_RS09565 SM00463 Small MutS-related domain DA85_RS09570 SM00530 Helix-turn-helix XRE-family like proteins DA85_RS09580 SM00382 ATPases associated with a variety of cellular activities DA85_RS09580 SM01086 C-terminal, D2-small domain, of ClpB protein DA85_RS09635 SM00448 cheY-homologous receiver domain DA85_RS09635 SM00862 Transcriptional regulatory protein, C terminal DA85_RS09640 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DA85_RS09640 SM00387 Histidine kinase-like ATPases DA85_RS09640 SM00388 His Kinase A (phosphoacceptor) domain DA85_RS09660 SM00996 S-adenosyl-L-homocysteine hydrolase DA85_RS09660 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DA85_RS09665 SM00387 Histidine kinase-like ATPases DA85_RS09665 SM00388 His Kinase A (phosphoacceptor) domain DA85_RS09785 SM00873 B3/4 domain DA85_RS09785 SM00874 tRNA synthetase B5 domain DA85_RS09785 SM00896 Ferredoxin-fold anticodon binding domain DA85_RS09800 SM00271 DnaJ molecular chaperone homology domain DA85_RS09805 SM00650 Ribosomal RNA adenine dimethylases DA85_RS09810 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family DA85_RS09830 SM00382 ATPases associated with a variety of cellular activities DA85_RS09865 SM00382 ATPases associated with a variety of cellular activities DA85_RS09875 SM00448 cheY-homologous receiver domain DA85_RS09875 SM00862 Transcriptional regulatory protein, C terminal DA85_RS09910 SM00563 Phosphate acyltransferases DA85_RS09915 SM00729 Elongator protein 3, MiaB family, Radical SAM DA85_RS09930 SM01091 Transporter associated domain DA85_RS09940 SM00530 Helix-turn-helix XRE-family like proteins DA85_RS09960 SM00316 Ribosomal protein S1-like RNA-binding domain DA85_RS09960 SM00322 K homology RNA-binding domain DA85_RS09985 SM01387 DA85_RS09985 DA85_RS09990 SM00316 Ribosomal protein S1-like RNA-binding domain DA85_RS09990 SM00322 K homology RNA-binding domain DA85_RS10005 SM00825 Beta-ketoacyl synthase DA85_RS10025 SM00287 Bacterial SH3 domain homologues DA85_RS10045 SM00347 helix_turn_helix multiple antibiotic resistance protein DA85_RS10060 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain DA85_RS10060 SM01232 DA85_RS10060 DA85_RS10635 SM01068 Putative carbohydrate binding domain DA85_RS12510 SM00849 Metallo-beta-lactamase superfamily DA85_RS13575 SM00434 DNA Topoisomerase IV DA85_RS14800 SM00387 Histidine kinase-like ATPases DA85_RS14800 SM00388 His Kinase A (phosphoacceptor) domain