BMNI_RS00005	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
BMNI_RS00010	SM00480	DNA polymerase III beta subunit
BMNI_RS00015	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS00030	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS00085	SM00878	Biotin carboxylase C-terminal domain
BMNI_RS00105	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
BMNI_RS00135	SM00316	Ribosomal protein S1-like RNA-binding domain
BMNI_RS00155	SM00493	BMNI_RS00155
BMNI_RS00165	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS00320	SM00481	DNA polymerase alpha chain like domain
BMNI_RS00410	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS00445	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS00480	SM00448	cheY-homologous receiver domain
BMNI_RS00525	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS00530	SM01068	Putative carbohydrate binding domain
BMNI_RS00575	SM00474	3'-5' exonuclease
BMNI_RS00585	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
BMNI_RS00585	SM00474	3'-5' exonuclease
BMNI_RS00585	SM00475	5'-3' exonuclease
BMNI_RS00585	SM00479	BMNI_RS00585
BMNI_RS00585	SM00482	DNA polymerase A domain
BMNI_RS00590	SM00487	DEAD-like helicases superfamily
BMNI_RS00590	SM00490	helicase superfamily c-terminal domain
BMNI_RS00595	SM00387	Histidine kinase-like ATPases
BMNI_RS00595	SM00433	TopoisomeraseII
BMNI_RS00615	SM00829	Enoylreductase
BMNI_RS00635	SM00387	Histidine kinase-like ATPases
BMNI_RS00635	SM00388	His Kinase A (phosphoacceptor) domain
BMNI_RS00645	SM00448	cheY-homologous receiver domain
BMNI_RS00660	SM00932	Scaffold protein Nfu/NifU N terminal
BMNI_RS00680	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BMNI_RS00695	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
BMNI_RS00695	SM00534	ATPase domain of DNA mismatch repair MUTS family
BMNI_RS00710	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BMNI_RS00725	SM00411	bacterial (prokaryotic) histone like domain
BMNI_RS00745	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS00830	SM00729	Elongator protein 3, MiaB family, Radical SAM
BMNI_RS00870	SM00886	Stress responsive A/B Barrel Domain
BMNI_RS00890	SM01018	B12 binding domain
BMNI_RS00895	SM00421	helix_turn_helix, Lux Regulon
BMNI_RS00925	SM00419	helix_turn_helix, cAMP Regulatory protein
BMNI_RS00930	SM00421	helix_turn_helix, Lux Regulon
BMNI_RS00935	SM00420	helix_turn_helix, Deoxyribose operon repressor
BMNI_RS00935	SM01134	BMNI_RS00935
BMNI_RS00955	SM00829	Enoylreductase
BMNI_RS00965	SM00354	helix_turn _helix lactose operon repressor
BMNI_RS01025	SM00052	Putative diguanylate phosphodiesterase
BMNI_RS01025	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BMNI_RS01025	SM00091	PAS domain
BMNI_RS01025	SM00267	diguanylate cyclase
BMNI_RS01035	SM00422	helix_turn_helix, mercury resistance
BMNI_RS01045	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS01065	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BMNI_RS01095	SM00346	helix_turn_helix isocitrate lyase regulation
BMNI_RS01115	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS01120	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BMNI_RS01150	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BMNI_RS01210	SM00047	Lysozyme subfamily 2
BMNI_RS01315	SM00316	Ribosomal protein S1-like RNA-binding domain
BMNI_RS01320	SM00226	Low molecular weight phosphatase family
BMNI_RS01360	SM01040	BRO family, N-terminal domain
BMNI_RS01365	SM00857	Resolvase, N terminal domain
BMNI_RS01410	SM00988	UreE urease accessory protein, N-terminal domain
BMNI_RS01430	SM00387	Histidine kinase-like ATPases
BMNI_RS01525	SM00062	Bacterial periplasmic substrate-binding proteins
BMNI_RS01540	SM00387	Histidine kinase-like ATPases
BMNI_RS01540	SM00388	His Kinase A (phosphoacceptor) domain
BMNI_RS01585	SM00342	helix_turn_helix, arabinose operon control protein
BMNI_RS01625	SM00421	helix_turn_helix, Lux Regulon
BMNI_RS01625	SM00448	cheY-homologous receiver domain
BMNI_RS01630	SM00387	Histidine kinase-like ATPases
BMNI_RS01630	SM00388	His Kinase A (phosphoacceptor) domain
BMNI_RS01630	SM00448	cheY-homologous receiver domain
BMNI_RS01730	SM00387	Histidine kinase-like ATPases
BMNI_RS01730	SM01049	BMNI_RS01730
BMNI_RS01735	SM00421	helix_turn_helix, Lux Regulon
BMNI_RS01735	SM00448	cheY-homologous receiver domain
BMNI_RS01770	SM01092	CO dehydrogenase flavoprotein C-terminal domain
BMNI_RS01775	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
BMNI_RS01865	SM00342	helix_turn_helix, arabinose operon control protein
BMNI_RS01945	SM00729	Elongator protein 3, MiaB family, Radical SAM
BMNI_RS01990	SM00028	Tetratricopeptide repeats
BMNI_RS02040	SM00267	diguanylate cyclase
BMNI_RS02045	SM01209	BMNI_RS02045
BMNI_RS02045	SM01210	BMNI_RS02045
BMNI_RS02065	SM00271	DnaJ molecular chaperone homology domain
BMNI_RS02075	SM00855	Phosphoglycerate mutase family
BMNI_RS02080	SM00357	Cold shock protein domain
BMNI_RS02145	SM00861	Transketolase, pyrimidine binding domain
BMNI_RS02150	SM00363	S4 RNA-binding domain
BMNI_RS02170	SM00257	Lysin motif
BMNI_RS02175	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS02205	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS02210	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS02240	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BMNI_RS02245	SM00822	BMNI_RS02245
BMNI_RS02250	SM00823	Phosphopantetheine attachment site
BMNI_RS02255	SM00825	Beta-ketoacyl synthase
BMNI_RS02270	SM00072	Guanylate kinase homologues.
BMNI_RS02355	SM00052	Putative diguanylate phosphodiesterase
BMNI_RS02355	SM00267	diguanylate cyclase
BMNI_RS02380	SM00052	Putative diguanylate phosphodiesterase
BMNI_RS02410	SM00478	endonuclease III
BMNI_RS02410	SM00525	BMNI_RS02410
BMNI_RS02425	SM00968	SMC proteins Flexible Hinge Domain
BMNI_RS02460	SM00849	Metallo-beta-lactamase superfamily
BMNI_RS02525	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS02650	SM00354	helix_turn _helix lactose operon repressor
BMNI_RS02655	SM00342	helix_turn_helix, arabinose operon control protein
BMNI_RS02695	SM00966	SpoVT / AbrB like domain 
BMNI_RS02705	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BMNI_RS02705	SM00895	BMNI_RS02705
BMNI_RS02765	SM00760	Bacterial dnaA protein helix-turn-helix domain
BMNI_RS02790	SM00387	Histidine kinase-like ATPases
BMNI_RS02790	SM00388	His Kinase A (phosphoacceptor) domain
BMNI_RS02895	SM00448	cheY-homologous receiver domain
BMNI_RS02895	SM00862	Transcriptional regulatory protein, C terminal
BMNI_RS02900	SM00387	Histidine kinase-like ATPases
BMNI_RS02930	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BMNI_RS02935	SM00448	cheY-homologous receiver domain
BMNI_RS02935	SM00862	Transcriptional regulatory protein, C terminal
BMNI_RS02940	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BMNI_RS02940	SM00387	Histidine kinase-like ATPases
BMNI_RS02940	SM00388	His Kinase A (phosphoacceptor) domain
BMNI_RS02955	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BMNI_RS02955	SM00387	Histidine kinase-like ATPases
BMNI_RS02955	SM00388	His Kinase A (phosphoacceptor) domain
BMNI_RS02975	SM00986	Uracil DNA glycosylase superfamily
BMNI_RS02975	SM00987	UreE urease accessory protein, C-terminal domain 
BMNI_RS03085	SM01130	BMNI_RS03085
BMNI_RS03095	SM00986	Uracil DNA glycosylase superfamily
BMNI_RS03095	SM00987	UreE urease accessory protein, C-terminal domain 
BMNI_RS03105	SM01409	BMNI_RS03105
BMNI_RS03110	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BMNI_RS03110	SM00954	Region found in RelA / SpoT proteins
BMNI_RS03120	SM00100	Cyclic nucleotide-monophosphate binding domain
BMNI_RS03120	SM00419	helix_turn_helix, cAMP Regulatory protein
BMNI_RS03125	SM00729	Elongator protein 3, MiaB family, Radical SAM
BMNI_RS03135	SM00342	helix_turn_helix, arabinose operon control protein
BMNI_RS03155	SM00358	Double-stranded RNA binding motif
BMNI_RS03155	SM00535	Ribonuclease III family
BMNI_RS03230	SM00917	LeuA allosteric (dimerisation) domain
BMNI_RS03245	SM00650	Ribosomal RNA adenine dimethylases
BMNI_RS03290	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS03300	SM00562	BMNI_RS03300
BMNI_RS03325	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BMNI_RS03325	SM00465	GIY-YIG type nucleases (URI domain)
BMNI_RS03365	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BMNI_RS03440	SM00479	BMNI_RS03440
BMNI_RS03460	SM00530	Helix-turn-helix XRE-family like proteins 
BMNI_RS03515	SM00287	Bacterial SH3 domain homologues
BMNI_RS03540	SM00014	Acid phosphatase homologues
BMNI_RS03545	SM00062	Bacterial periplasmic substrate-binding proteins
BMNI_RS03560	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS03585	SM00341	Helicase and RNase D C-terminal
BMNI_RS03585	SM00474	3'-5' exonuclease
BMNI_RS03600	SM00434	DNA Topoisomerase IV
BMNI_RS03615	SM01004	Delta-aminolevulinic acid dehydratase
BMNI_RS03630	SM00347	helix_turn_helix multiple antibiotic resistance protein
BMNI_RS03700	SM00411	bacterial (prokaryotic) histone like domain
BMNI_RS03705	SM00422	helix_turn_helix, mercury resistance
BMNI_RS03750	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BMNI_RS03860	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
BMNI_RS03865	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
BMNI_RS03910	SM00849	Metallo-beta-lactamase superfamily
BMNI_RS03935	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS03940	SM00481	DNA polymerase alpha chain like domain
BMNI_RS03960	SM00363	S4 RNA-binding domain
BMNI_RS03960	SM01390	BMNI_RS03960
BMNI_RS04005	SM01211	BMNI_RS04005
BMNI_RS04040	SM00998	Adenylosuccinate lyase C-terminus
BMNI_RS04055	SM00829	Enoylreductase
BMNI_RS04060	SM00825	Beta-ketoacyl synthase
BMNI_RS04105	SM00062	Bacterial periplasmic substrate-binding proteins
BMNI_RS04105	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BMNI_RS04135	SM00344	helix_turn_helix ASNC type
BMNI_RS04140	SM00986	Uracil DNA glycosylase superfamily
BMNI_RS04140	SM00987	UreE urease accessory protein, C-terminal domain 
BMNI_RS04145	SM00318	Staphylococcal nuclease homologues
BMNI_RS04150	SM00671	Sel1-like repeats.
BMNI_RS04170	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BMNI_RS04175	SM00836	DALR anticodon binding domain
BMNI_RS04175	SM01016	Arginyl tRNA synthetase N terminal dom
BMNI_RS04235	SM00257	Lysin motif
BMNI_RS04245	SM01323	BMNI_RS04245
BMNI_RS04300	SM00845	GatB domain
BMNI_RS04325	SM00878	Biotin carboxylase C-terminal domain
BMNI_RS04365	SM00646	BMNI_RS04365
BMNI_RS04375	SM00937	BMNI_RS04375
BMNI_RS04440	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS04475	SM00487	DEAD-like helicases superfamily
BMNI_RS04475	SM00490	helicase superfamily c-terminal domain
BMNI_RS04550	SM00729	Elongator protein 3, MiaB family, Radical SAM
BMNI_RS04715	SM00936	Penicillin-binding protein 5, C-terminal domain 
BMNI_RS04740	SM00849	Metallo-beta-lactamase superfamily
BMNI_RS04745	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS04770	SM01230	BMNI_RS04770
BMNI_RS04775	SM00938	Nitrogen regulatory protein P-II
BMNI_RS04835	SM00919	Malic enzyme, NAD binding domain
BMNI_RS04835	SM01274	BMNI_RS04835
BMNI_RS04840	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BMNI_RS04855	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS04905	SM00905	Dihydroneopterin aldolase
BMNI_RS04945	SM00091	PAS domain
BMNI_RS04945	SM00387	Histidine kinase-like ATPases
BMNI_RS04945	SM00388	His Kinase A (phosphoacceptor) domain
BMNI_RS04945	SM00448	cheY-homologous receiver domain
BMNI_RS04985	SM00852	Probable molybdopterin binding domain
BMNI_RS05005	SM00487	DEAD-like helicases superfamily
BMNI_RS05005	SM00490	helicase superfamily c-terminal domain
BMNI_RS05015	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BMNI_RS05020	SM00450	Rhodanese Homology Domain
BMNI_RS05030	SM00267	diguanylate cyclase
BMNI_RS05060	SM00028	Tetratricopeptide repeats
BMNI_RS05080	SM00903	Flavin reductase like domain
BMNI_RS05095	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BMNI_RS05110	SM01234	BMNI_RS05110
BMNI_RS05160	SM00857	Resolvase, N terminal domain
BMNI_RS05170	SM01040	BRO family, N-terminal domain
BMNI_RS05245	SM00434	DNA Topoisomerase IV
BMNI_RS05255	SM00072	Guanylate kinase homologues.
BMNI_RS05260	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BMNI_RS05260	SM00866	BMNI_RS05260
BMNI_RS05275	SM00411	bacterial (prokaryotic) histone like domain
BMNI_RS05280	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS05280	SM00464	Found in ATP-dependent protease La (LON)
BMNI_RS05285	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS05285	SM00994	ClpX C4-type zinc finger
BMNI_RS05285	SM01086	C-terminal, D2-small domain, of ClpB protein
BMNI_RS05315	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS05315	SM00448	cheY-homologous receiver domain
BMNI_RS05320	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BMNI_RS05320	SM00387	Histidine kinase-like ATPases
BMNI_RS05320	SM00388	His Kinase A (phosphoacceptor) domain
BMNI_RS05325	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS05325	SM00448	cheY-homologous receiver domain
BMNI_RS05330	SM00387	Histidine kinase-like ATPases
BMNI_RS05330	SM00388	His Kinase A (phosphoacceptor) domain
BMNI_RS05350	SM00822	BMNI_RS05350
BMNI_RS05360	SM00729	Elongator protein 3, MiaB family, Radical SAM
BMNI_RS05380	SM00861	Transketolase, pyrimidine binding domain
BMNI_RS05400	SM01192	BMNI_RS05400
BMNI_RS05400	SM01193	BMNI_RS05400
BMNI_RS05450	SM00852	Probable molybdopterin binding domain
BMNI_RS05510	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BMNI_RS05575	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS05575	SM01086	C-terminal, D2-small domain, of ClpB protein
BMNI_RS05615	SM00422	helix_turn_helix, mercury resistance
BMNI_RS05650	SM00530	Helix-turn-helix XRE-family like proteins 
BMNI_RS05660	SM00878	Biotin carboxylase C-terminal domain
BMNI_RS05705	SM01329	BMNI_RS05705
BMNI_RS05710	SM00098	Alkaline phosphatase homologues
BMNI_RS05715	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BMNI_RS05720	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS05735	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS05740	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BMNI_RS05750	SM00662	RNA polymerases D
BMNI_RS05815	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BMNI_RS05820	SM01374	BMNI_RS05820
BMNI_RS05840	SM00322	K homology RNA-binding domain
BMNI_RS05855	SM01382	BMNI_RS05855
BMNI_RS05855	SM01383	BMNI_RS05855
BMNI_RS05875	SM01403	BMNI_RS05875
BMNI_RS05885	SM00838	Elongation factor G C-terminus
BMNI_RS05885	SM00889	Elongation factor G, domain IV
BMNI_RS05905	SM00663	RNA polymerase I subunit A N-terminus
BMNI_RS05930	SM00649	Ribosomal protein L11/L12
BMNI_RS05935	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
BMNI_RS05935	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BMNI_RS05965	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BMNI_RS05970	SM00116	Domain in cystathionine beta-synthase and other proteins.
BMNI_RS06010	SM00971	Serine acetyltransferase, N-terminal
BMNI_RS06025	SM00357	Cold shock protein domain
BMNI_RS06035	SM00978	BMNI_RS06035
BMNI_RS06145	SM00903	Flavin reductase like domain
BMNI_RS06220	SM00833	Cobalamin synthesis protein cobW C-terminal domain
BMNI_RS06265	SM00342	helix_turn_helix, arabinose operon control protein
BMNI_RS06345	SM01091	Transporter associated domain
BMNI_RS06370	SM00822	BMNI_RS06370
BMNI_RS06375	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS06395	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS06450	SM00988	UreE urease accessory protein, N-terminal domain
BMNI_RS06495	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS06605	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BMNI_RS06615	SM00244	prohibitin homologues
BMNI_RS06620	SM00244	prohibitin homologues
BMNI_RS06730	SM00292	breast cancer carboxy-terminal domain
BMNI_RS06730	SM00532	Ligase N family
BMNI_RS06750	SM00864	Tubulin/FtsZ family, GTPase domain
BMNI_RS06750	SM00865	Tubulin/FtsZ family, C-terminal domain
BMNI_RS06755	SM00842	Cell division protein FtsA
BMNI_RS06835	SM00644	BMNI_RS06835
BMNI_RS06840	SM00271	DnaJ molecular chaperone homology domain
BMNI_RS06850	SM00641	Glycosyl hydrolases family 25
BMNI_RS06870	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BMNI_RS06890	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS07010	SM00400	zinc finger
BMNI_RS07010	SM00493	BMNI_RS07010
BMNI_RS07025	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
BMNI_RS07045	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
BMNI_RS07050	SM00851	MGS-like domain
BMNI_RS07065	SM00357	Cold shock protein domain
BMNI_RS07105	SM00344	helix_turn_helix ASNC type
BMNI_RS07145	SM00287	Bacterial SH3 domain homologues
BMNI_RS07150	SM00487	DEAD-like helicases superfamily
BMNI_RS07150	SM00490	helicase superfamily c-terminal domain
BMNI_RS07160	SM00357	Cold shock protein domain
BMNI_RS07170	SM00849	Metallo-beta-lactamase superfamily
BMNI_RS07190	SM00347	helix_turn_helix multiple antibiotic resistance protein
BMNI_RS07195	SM00448	cheY-homologous receiver domain
BMNI_RS07195	SM00862	Transcriptional regulatory protein, C terminal
BMNI_RS07200	SM00387	Histidine kinase-like ATPases
BMNI_RS07255	SM01400	BMNI_RS07255
BMNI_RS07310	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS07315	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS07370	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS07415	SM00917	LeuA allosteric (dimerisation) domain
BMNI_RS07435	SM00344	helix_turn_helix ASNC type
BMNI_RS07440	SM00347	helix_turn_helix multiple antibiotic resistance protein
BMNI_RS07470	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS07475	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS07480	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS07505	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BMNI_RS07550	SM00448	cheY-homologous receiver domain
BMNI_RS07550	SM00862	Transcriptional regulatory protein, C terminal
BMNI_RS07590	SM00091	PAS domain
BMNI_RS07590	SM00387	Histidine kinase-like ATPases
BMNI_RS07590	SM00388	His Kinase A (phosphoacceptor) domain
BMNI_RS07610	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS07680	SM01120	BMNI_RS07680
BMNI_RS07690	SM01120	BMNI_RS07690
BMNI_RS07715	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS07760	SM00346	helix_turn_helix isocitrate lyase regulation
BMNI_RS07780	SM00507	HNH nucleases
BMNI_RS07785	SM00478	endonuclease III
BMNI_RS07810	SM00363	S4 RNA-binding domain
BMNI_RS07830	SM00911	HWE histidine kinase
BMNI_RS07840	SM00448	cheY-homologous receiver domain
BMNI_RS07855	SM00387	Histidine kinase-like ATPases
BMNI_RS07915	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS07930	SM00344	helix_turn_helix ASNC type
BMNI_RS07965	SM00788	Adenylosuccinate synthetase
BMNI_RS08000	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS08050	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS08055	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BMNI_RS08080	SM00671	Sel1-like repeats.
BMNI_RS08085	SM00841	Elongation factor P, C-terminal
BMNI_RS08085	SM01185	BMNI_RS08085
BMNI_RS08105	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS08120	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BMNI_RS08120	SM00895	BMNI_RS08120
BMNI_RS08160	SM00861	Transketolase, pyrimidine binding domain
BMNI_RS08165	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BMNI_RS08205	SM00829	Enoylreductase
BMNI_RS08230	SM01001	AIR carboxylase
BMNI_RS08245	SM00028	Tetratricopeptide repeats
BMNI_RS08270	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS08280	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
BMNI_RS08295	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS08315	SM01058	CarD-like/TRCF domain
BMNI_RS08325	SM00363	S4 RNA-binding domain
BMNI_RS08330	SM00490	helicase superfamily c-terminal domain
BMNI_RS08375	SM00878	Biotin carboxylase C-terminal domain
BMNI_RS08395	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS08400	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS08425	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BMNI_RS08425	SM00895	BMNI_RS08425
BMNI_RS08430	SM00347	helix_turn_helix multiple antibiotic resistance protein
BMNI_RS08440	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS08465	SM00487	DEAD-like helicases superfamily
BMNI_RS08465	SM00490	helicase superfamily c-terminal domain
BMNI_RS08525	SM00798	AICARFT/IMPCHase bienzyme
BMNI_RS08525	SM00851	MGS-like domain
BMNI_RS08560	SM00830	Chorismate mutase type II
BMNI_RS08565	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS08565	SM00962	SRP54-type protein, GTPase domain
BMNI_RS08565	SM00963	SRP54-type protein, helical bundle domain
BMNI_RS08575	SM00947	Carbonic anhydrase
BMNI_RS08615	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BMNI_RS08615	SM00245	tail specific protease
BMNI_RS08650	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
BMNI_RS08745	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS08745	SM01086	C-terminal, D2-small domain, of ClpB protein
BMNI_RS08760	SM00937	BMNI_RS08760
BMNI_RS08765	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BMNI_RS08870	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BMNI_RS08875	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS08875	SM00843	BMNI_RS08875
BMNI_RS08960	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BMNI_RS09010	SM00861	Transketolase, pyrimidine binding domain
BMNI_RS09015	SM00881	CoA binding domain
BMNI_RS09045	SM00729	Elongator protein 3, MiaB family, Radical SAM
BMNI_RS09050	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS09050	SM00962	SRP54-type protein, GTPase domain
BMNI_RS09050	SM00963	SRP54-type protein, helical bundle domain
BMNI_RS09060	SM00849	Metallo-beta-lactamase superfamily
BMNI_RS09100	SM00957	SecA DEAD-like domain
BMNI_RS09100	SM00958	SecA preprotein cross-linking domain
BMNI_RS09155	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS09170	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS09175	SM00870	BMNI_RS09175
BMNI_RS09180	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BMNI_RS09180	SM00895	BMNI_RS09180
BMNI_RS09185	SM00870	BMNI_RS09185
BMNI_RS09215	SM00893	Electron transfer flavoprotein domain
BMNI_RS09220	SM00893	Electron transfer flavoprotein domain
BMNI_RS09335	SM00563	Phosphate acyltransferases
BMNI_RS09350	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS09375	SM00100	Cyclic nucleotide-monophosphate binding domain
BMNI_RS09380	SM00448	cheY-homologous receiver domain
BMNI_RS09380	SM00862	Transcriptional regulatory protein, C terminal
BMNI_RS09420	SM00869	Autotransporter beta-domain
BMNI_RS09440	SM00422	helix_turn_helix, mercury resistance
BMNI_RS09460	SM00327	von Willebrand factor (vWF) type A domain
BMNI_RS09470	SM00271	DnaJ molecular chaperone homology domain
BMNI_RS09480	SM00116	Domain in cystathionine beta-synthase and other proteins.
BMNI_RS09480	SM01091	Transporter associated domain
BMNI_RS09520	SM00833	Cobalamin synthesis protein cobW C-terminal domain
BMNI_RS09580	SM00882	Coenzyme A transferase
BMNI_RS09590	SM00354	helix_turn _helix lactose operon repressor
BMNI_RS09615	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS09625	SM00470	ParB-like nuclease domain
BMNI_RS09640	SM01228	BMNI_RS09640
BMNI_RS09655	SM00357	Cold shock protein domain
BMNI_RS09655	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS09655	SM00959	Rho termination factor, N-terminal domain
BMNI_RS09695	SM00479	BMNI_RS09695
BMNI_RS09710	SM00978	BMNI_RS09710
BMNI_RS09715	SM00925	MltA specific insert domain
BMNI_RS09720	SM00463	Small MutS-related domain
BMNI_RS09725	SM00530	Helix-turn-helix XRE-family like proteins 
BMNI_RS09735	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS09735	SM01086	C-terminal, D2-small domain, of ClpB protein
BMNI_RS09795	SM00448	cheY-homologous receiver domain
BMNI_RS09795	SM00862	Transcriptional regulatory protein, C terminal
BMNI_RS09800	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BMNI_RS09800	SM00387	Histidine kinase-like ATPases
BMNI_RS09800	SM00388	His Kinase A (phosphoacceptor) domain
BMNI_RS09820	SM00996	S-adenosyl-L-homocysteine hydrolase
BMNI_RS09820	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
BMNI_RS09825	SM00387	Histidine kinase-like ATPases
BMNI_RS09825	SM00388	His Kinase A (phosphoacceptor) domain
BMNI_RS09950	SM00873	B3/4 domain
BMNI_RS09950	SM00874	tRNA synthetase B5 domain
BMNI_RS09950	SM00896	Ferredoxin-fold anticodon binding domain
BMNI_RS09970	SM00271	DnaJ molecular chaperone homology domain
BMNI_RS09975	SM00650	Ribosomal RNA adenine dimethylases
BMNI_RS09980	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
BMNI_RS10000	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS10035	SM00382	ATPases associated with a variety of cellular activities
BMNI_RS10045	SM00448	cheY-homologous receiver domain
BMNI_RS10045	SM00862	Transcriptional regulatory protein, C terminal
BMNI_RS10080	SM00563	Phosphate acyltransferases
BMNI_RS10085	SM00729	Elongator protein 3, MiaB family, Radical SAM
BMNI_RS10100	SM01091	Transporter associated domain
BMNI_RS10110	SM00530	Helix-turn-helix XRE-family like proteins 
BMNI_RS10130	SM00316	Ribosomal protein S1-like RNA-binding domain
BMNI_RS10130	SM00322	K homology RNA-binding domain
BMNI_RS10155	SM01387	BMNI_RS10155
BMNI_RS10160	SM00316	Ribosomal protein S1-like RNA-binding domain
BMNI_RS10160	SM00322	K homology RNA-binding domain
BMNI_RS10180	SM00825	Beta-ketoacyl synthase
BMNI_RS10200	SM00287	Bacterial SH3 domain homologues
BMNI_RS10220	SM00347	helix_turn_helix multiple antibiotic resistance protein
BMNI_RS10235	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
BMNI_RS10235	SM01232	BMNI_RS10235
BMNI_RS10365	SM00878	Biotin carboxylase C-terminal domain
BMNI_RS10935	SM00433	TopoisomeraseII
BMNI_RS11085	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BMNI_RS15010	SM00919	Malic enzyme, NAD binding domain
BMNI_RS15445	SM00434	DNA Topoisomerase IV
