locus-tag class description BKD03_RS00055 PF05173 Dihydrodipicolinate reductase, C-terminus BKD03_RS00055 PF01113 Dihydrodipicolinate reductase, N-terminus BKD03_RS00060 PF00300 Histidine phosphatase superfamily (branch 1) BKD03_RS00070 PF01979 Amidohydrolase family BKD03_RS00095 PF00005 ABC transporter BKD03_RS00095 PF00664 ABC transporter transmembrane region BKD03_RS00100 PF00553 Cellulose binding domain BKD03_RS00100 PF00942 Cellulose binding domain BKD03_RS00100 PF00041 Fibronectin type III domain BKD03_RS00100 PF00759 Glycosyl hydrolase family 9 BKD03_RS00105 PF00881 Nitroreductase family BKD03_RS00120 PF00171 Aldehyde dehydrogenase family BKD03_RS00130 PF13091 PLD-like domain BKD03_RS00130 PF13396 Phospholipase_D-nuclease N-terminal BKD03_RS00140 PF00009 Elongation factor Tu GTP binding domain BKD03_RS00140 PF03144 Elongation factor Tu domain 2 BKD03_RS00140 PF16658 Class II release factor RF3, C-terminal domain BKD03_RS00145 PF04127 DNA / pantothenate metabolism flavoprotein BKD03_RS00145 PF02441 Flavoprotein BKD03_RS00150 PF03109 ABC1 family BKD03_RS00155 PF01209 ubiE/COQ5 methyltransferase family BKD03_RS00170 PF04102 SlyX BKD03_RS00175 PF01625 Peptide methionine sulfoxide reductase BKD03_RS00195 PF13610 DDE domain BKD03_RS00210 PF01494 FAD binding domain BKD03_RS00215 PF17990 L-Lysine epsilon oxidase N-terminal BKD03_RS00215 PF18417 L-lysine epsilon oxidase C-terminal domain BKD03_RS00270 PF09278 MerR, DNA binding BKD03_RS00270 PF00376 MerR family regulatory protein BKD03_RS00310 PF02371 Transposase IS116/IS110/IS902 family BKD03_RS00310 PF01548 Transposase BKD03_RS00370 PF01869 BadF/BadG/BcrA/BcrD ATPase family BKD03_RS00375 PF02082 Transcriptional regulator BKD03_RS00380 PF02492 CobW/HypB/UreG, nucleotide-binding domain BKD03_RS00380 PF07683 Cobalamin synthesis protein cobW C-terminal domain BKD03_RS00385 PF01297 Zinc-uptake complex component A periplasmic BKD03_RS00390 PF00005 ABC transporter BKD03_RS00395 PF00950 ABC 3 transport family BKD03_RS00400 PF01475 Ferric uptake regulator family BKD03_RS00435 PF00771 FHIPEP family BKD03_RS00440 PF01313 Bacterial export proteins, family 3 BKD03_RS00445 PF03963 Flagellar hook capping protein - N-terminal region BKD03_RS00450 PF07378 Flagellar protein FlbT BKD03_RS00470 PF00460 Flagella basal body rod protein BKD03_RS00470 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BKD03_RS00470 PF07559 Flagellar basal body protein FlaE BKD03_RS00475 PF00486 Transcriptional regulatory protein, C terminal BKD03_RS00485 PF02120 Flagellar hook-length control protein FliK BKD03_RS00495 PF13677 Membrane MotB of proton-channel complex MotA/MotB BKD03_RS00495 PF00691 OmpA family BKD03_RS00505 PF08345 Flagellar M-ring protein C-terminal BKD03_RS00505 PF01514 Secretory protein of YscJ/FliF family BKD03_RS00510 PF00669 Bacterial flagellin N-terminal helical region BKD03_RS00510 PF00700 Bacterial flagellin C-terminal helical region BKD03_RS00515 PF12951 Passenger-associated-transport-repeat BKD03_RS00525 PF13407 Periplasmic binding protein domain BKD03_RS00530 PF00005 ABC transporter BKD03_RS00535 PF02653 Branched-chain amino acid transport system / permease component BKD03_RS00545 PF12833 Helix-turn-helix domain BKD03_RS00550 PF00171 Aldehyde dehydrogenase family BKD03_RS00555 PF00732 GMC oxidoreductase BKD03_RS00555 PF05199 GMC oxidoreductase BKD03_RS00570 PF11862 Domain of unknown function (DUF3382) BKD03_RS00570 PF02653 Branched-chain amino acid transport system / permease component BKD03_RS00575 PF00005 ABC transporter BKD03_RS00575 PF12399 Branched-chain amino acid ATP-binding cassette transporter BKD03_RS00580 PF00005 ABC transporter BKD03_RS00605 PF03328 HpcH/HpaI aldolase/citrate lyase family BKD03_RS00610 PF01557 Fumarylacetoacetate (FAA) hydrolase family BKD03_RS00615 PF01557 Fumarylacetoacetate (FAA) hydrolase family BKD03_RS00620 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BKD03_RS00635 PF01047 MarR family BKD03_RS00640 PF01636 Phosphotransferase enzyme family BKD03_RS00645 PF00202 Aminotransferase class-III BKD03_RS00665 PF07702 UTRA domain BKD03_RS00665 PF00392 Bacterial regulatory proteins, gntR family BKD03_RS00670 PF01547 Bacterial extracellular solute-binding protein BKD03_RS00680 PF00528 Binding-protein-dependent transport system inner membrane component BKD03_RS00685 PF00005 ABC transporter BKD03_RS00685 PF17912 MalK OB fold domain BKD03_RS00700 PF09084 NMT1/THI5 like BKD03_RS00705 PF00005 ABC transporter BKD03_RS00715 PF00480 ROK family BKD03_RS00715 PF01047 MarR family BKD03_RS00720 PF12951 Passenger-associated-transport-repeat BKD03_RS00725 PF01596 O-methyltransferase BKD03_RS00730 PF00593 TonB dependent receptor BKD03_RS00730 PF07715 TonB-dependent Receptor Plug Domain BKD03_RS00735 PF12833 Helix-turn-helix domain BKD03_RS00740 PF13458 Periplasmic binding protein BKD03_RS00745 PF02653 Branched-chain amino acid transport system / permease component BKD03_RS00755 PF00005 ABC transporter BKD03_RS00755 PF12399 Branched-chain amino acid ATP-binding cassette transporter BKD03_RS00760 PF00005 ABC transporter BKD03_RS00770 PF04055 Radical SAM superfamily BKD03_RS00780 PF00376 MerR family regulatory protein BKD03_RS00780 PF13614 AAA domain BKD03_RS00785 PF02195 ParB-like nuclease domain BKD03_RS00785 PF07506 RepB plasmid partitioning protein BKD03_RS00790 PF03428 Replication protein C N-terminal domain BKD03_RS00790 PF11800 Replication protein C C-terminal region BKD03_RS00800 PF00294 pfkB family carbohydrate kinase BKD03_RS00805 PF01156 Inosine-uridine preferring nucleoside hydrolase BKD03_RS00810 PF02653 Branched-chain amino acid transport system / permease component BKD03_RS00820 PF00005 ABC transporter BKD03_RS00825 PF02608 ABC transporter substrate-binding protein PnrA-like BKD03_RS00835 PF01648 4'-phosphopantetheinyl transferase superfamily BKD03_RS00835 PF17837 4'-phosphopantetheinyl transferase N-terminal domain BKD03_RS00845 PF00857 Isochorismatase family BKD03_RS00845 PF00550 Phosphopantetheine attachment site BKD03_RS00850 PF00501 AMP-binding enzyme BKD03_RS00850 PF13193 AMP-binding enzyme C-terminal domain BKD03_RS00855 PF00425 chorismate binding enzyme BKD03_RS00860 PF00975 Thioesterase domain BKD03_RS00860 PF00668 Condensation domain BKD03_RS00860 PF00550 Phosphopantetheine attachment site BKD03_RS00860 PF00501 AMP-binding enzyme BKD03_RS00860 PF13193 AMP-binding enzyme C-terminal domain BKD03_RS00865 PF00174 Oxidoreductase molybdopterin binding domain BKD03_RS00880 PF04542 Sigma-70 region 2 BKD03_RS00880 PF04545 Sigma-70, region 4 BKD03_RS00885 PF06532 Negative regulator of sigma F BKD03_RS00890 PF00392 Bacterial regulatory proteins, gntR family BKD03_RS00890 PF07729 FCD domain BKD03_RS00895 PF13458 Periplasmic binding protein BKD03_RS00900 PF02653 Branched-chain amino acid transport system / permease component BKD03_RS00910 PF00005 ABC transporter BKD03_RS00910 PF12399 Branched-chain amino acid ATP-binding cassette transporter BKD03_RS00915 PF00005 ABC transporter BKD03_RS00935 PF00676 Dehydrogenase E1 component BKD03_RS00940 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BKD03_RS00940 PF00364 Biotin-requiring enzyme BKD03_RS00940 PF02817 e3 binding domain BKD03_RS00945 PF01488 Shikimate / quinate 5-dehydrogenase BKD03_RS00945 PF08501 Shikimate dehydrogenase substrate binding domain BKD03_RS00945 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BKD03_RS00975 PF02308 MgtC family BKD03_RS00980 PF08447 PAS fold BKD03_RS00980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD03_RS00980 PF13493 Domain of unknown function (DUF4118) BKD03_RS00980 PF00512 His Kinase A (phospho-acceptor) domain BKD03_RS00980 PF13426 PAS domain BKD03_RS00980 PF00989 PAS fold BKD03_RS00985 PF00072 Response regulator receiver domain BKD03_RS00985 PF00196 Bacterial regulatory proteins, luxR family BKD03_RS00995 PF00072 Response regulator receiver domain BKD03_RS01005 PF00459 Inositol monophosphatase family BKD03_RS01035 PF00011 Hsp20/alpha crystallin family BKD03_RS01040 PF01212 Beta-eliminating lyase BKD03_RS01050 PF00310 Glutamine amidotransferases class-II BKD03_RS01050 PF04898 Glutamate synthase central domain BKD03_RS01050 PF01645 Conserved region in glutamate synthase BKD03_RS01050 PF01493 GXGXG motif BKD03_RS01055 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKD03_RS01055 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BKD03_RS01060 PF00324 Amino acid permease BKD03_RS01080 PF00437 Type II/IV secretion system protein BKD03_RS01085 PF03743 Bacterial conjugation TrbI-like protein BKD03_RS01090 PF03524 Conjugal transfer protein BKD03_RS01095 PF04335 VirB8 protein BKD03_RS01100 PF08139 Prokaryotic membrane lipoprotein lipid attachment site BKD03_RS01105 PF04610 TrbL/VirB6 plasmid conjugal transfer protein BKD03_RS01110 PF07996 Type IV secretion system proteins BKD03_RS01115 PF03135 CagE, TrbE, VirB family, component of type IV transporter system BKD03_RS01120 PF05101 Type IV secretory pathway, VirB3-like protein BKD03_RS01125 PF04956 TrbC/VIRB2 family BKD03_RS01130 PF01464 Transglycosylase SLT domain BKD03_RS01135 PF13406 Transglycosylase SLT domain BKD03_RS01140 PF00483 Nucleotidyl transferase BKD03_RS01150 PF00571 CBS domain BKD03_RS01150 PF01380 SIS domain BKD03_RS01160 PF16200 C-terminal region of band_7 BKD03_RS01160 PF01145 SPFH domain / Band 7 family BKD03_RS01165 PF00762 Ferrochelatase BKD03_RS01175 PF16653 Saccharopine dehydrogenase C-terminal domain BKD03_RS01175 PF03435 Saccharopine dehydrogenase NADP binding domain BKD03_RS01195 PF00158 Sigma-54 interaction domain BKD03_RS01195 PF00072 Response regulator receiver domain BKD03_RS01195 PF02954 Bacterial regulatory protein, Fis family BKD03_RS01205 PF05951 Bacterial protein of unknown function (DUF882) BKD03_RS01210 PF01081 KDPG and KHG aldolase BKD03_RS01220 PF00581 Rhodanese-like domain BKD03_RS01220 PF17773 UPF0176 acylphosphatase like domain BKD03_RS01235 PF00528 Binding-protein-dependent transport system inner membrane component BKD03_RS01240 PF03459 TOBE domain BKD03_RS01240 PF00005 ABC transporter BKD03_RS01255 PF03824 High-affinity nickel-transport protein BKD03_RS01265 PF03466 LysR substrate binding domain BKD03_RS01265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD03_RS01270 PF01425 Amidase BKD03_RS01275 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BKD03_RS01275 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BKD03_RS01280 PF13807 G-rich domain on putative tyrosine kinase BKD03_RS01280 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BKD03_RS01280 PF02706 Chain length determinant protein BKD03_RS01315 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BKD03_RS01315 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BKD03_RS01320 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BKD03_RS01320 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BKD03_RS01325 PF00005 ABC transporter BKD03_RS01325 PF08402 TOBE domain BKD03_RS01345 PF07690 Major Facilitator Superfamily BKD03_RS01350 PF13533 Biotin-lipoyl like BKD03_RS01355 PF17922 Tetracyclin repressor-like, C-terminal domain BKD03_RS01355 PF00440 Bacterial regulatory proteins, tetR family BKD03_RS01360 PF00196 Bacterial regulatory proteins, luxR family BKD03_RS01360 PF03472 Autoinducer binding domain BKD03_RS01370 PF01312 FlhB HrpN YscU SpaS Family BKD03_RS01375 PF01706 FliG C-terminal domain BKD03_RS01375 PF14841 FliG middle domain BKD03_RS01375 PF14842 FliG N-terminal domain BKD03_RS01380 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BKD03_RS01395 PF01618 MotA/TolQ/ExbB proton channel family BKD03_RS01405 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BKD03_RS01405 PF00460 Flagella basal body rod protein BKD03_RS01410 PF18269 T3SS EscN ATPase C-terminal domain BKD03_RS01410 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BKD03_RS01420 PF01569 PAP2 superfamily BKD03_RS01450 PF12833 Helix-turn-helix domain BKD03_RS01455 PF01527 Transposase BKD03_RS01460 PF07690 Major Facilitator Superfamily BKD03_RS01465 PF00596 Class II Aldolase and Adducin N-terminal domain BKD03_RS01470 PF01370 NAD dependent epimerase/dehydratase family BKD03_RS01475 PF00455 DeoR C terminal sensor domain BKD03_RS01475 PF08220 DeoR-like helix-turn-helix domain BKD03_RS01480 PF01261 Xylose isomerase-like TIM barrel BKD03_RS01485 PF17042 Nucleotide-binding C-terminal domain BKD03_RS01485 PF07005 Sugar-binding N-terminal domain BKD03_RS01490 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BKD03_RS01490 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BKD03_RS01495 PF00460 Flagella basal body rod protein BKD03_RS01500 PF00460 Flagella basal body rod protein BKD03_RS01500 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BKD03_RS01505 PF02049 Flagellar hook-basal body complex protein FliE BKD03_RS01510 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BKD03_RS01510 PF00460 Flagella basal body rod protein BKD03_RS01515 PF13144 Chaperone for flagella basal body P-ring formation BKD03_RS01520 PF02119 Flagellar P-ring protein BKD03_RS01530 PF02107 Flagellar L-ring protein BKD03_RS01540 PF00813 FliP family BKD03_RS01570 PF00034 Cytochrome c BKD03_RS01585 PF07729 FCD domain BKD03_RS01585 PF00392 Bacterial regulatory proteins, gntR family BKD03_RS01590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD03_RS01590 PF03466 LysR substrate binding domain BKD03_RS01600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD03_RS01600 PF03466 LysR substrate binding domain BKD03_RS01605 PF02515 CoA-transferase family III BKD03_RS01615 PF03328 HpcH/HpaI aldolase/citrate lyase family BKD03_RS01620 PF01292 Prokaryotic cytochrome b561 BKD03_RS01625 PF01794 Ferric reductase like transmembrane component BKD03_RS01630 PF00174 Oxidoreductase molybdopterin binding domain BKD03_RS01645 PF07683 Cobalamin synthesis protein cobW C-terminal domain BKD03_RS01645 PF02492 CobW/HypB/UreG, nucleotide-binding domain BKD03_RS01655 PF01047 MarR family BKD03_RS01660 PF00356 Bacterial regulatory proteins, lacI family BKD03_RS01670 PF07722 Peptidase C26 BKD03_RS01685 PF00144 Beta-lactamase BKD03_RS01700 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BKD03_RS01700 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BKD03_RS01705 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BKD03_RS01710 PF02233 NAD(P) transhydrogenase beta subunit BKD03_RS01725 PF01575 MaoC like domain BKD03_RS01735 PF01165 Ribosomal protein S21 BKD03_RS01755 PF00528 Binding-protein-dependent transport system inner membrane component BKD03_RS01760 PF09383 NIL domain BKD03_RS01760 PF00005 ABC transporter BKD03_RS01770 PF03180 NLPA lipoprotein BKD03_RS01775 PF05199 GMC oxidoreductase BKD03_RS01775 PF00732 GMC oxidoreductase BKD03_RS01785 PF02653 Branched-chain amino acid transport system / permease component BKD03_RS01795 PF00005 ABC transporter BKD03_RS01795 PF12399 Branched-chain amino acid ATP-binding cassette transporter BKD03_RS01805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD03_RS01805 PF03466 LysR substrate binding domain BKD03_RS01815 PF00202 Aminotransferase class-III BKD03_RS01820 PF00497 Bacterial extracellular solute-binding proteins, family 3 BKD03_RS01825 PF07930 D-aminopeptidase, domain B BKD03_RS01825 PF00144 Beta-lactamase BKD03_RS01830 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BKD03_RS01830 PF00205 Thiamine pyrophosphate enzyme, central domain BKD03_RS01830 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BKD03_RS01835 PF00392 Bacterial regulatory proteins, gntR family BKD03_RS01835 PF07729 FCD domain BKD03_RS01850 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BKD03_RS01860 PF05035 2-keto-3-deoxy-galactonokinase BKD03_RS01865 PF01081 KDPG and KHG aldolase BKD03_RS01870 PF13407 Periplasmic binding protein domain BKD03_RS01875 PF00005 ABC transporter BKD03_RS01880 PF02653 Branched-chain amino acid transport system / permease component BKD03_RS01885 PF01063 Amino-transferase class IV BKD03_RS01890 PF05962 HutD BKD03_RS01895 PF17392 Urocanase C-terminal domain BKD03_RS01895 PF17391 Urocanase N-terminal domain BKD03_RS01895 PF01175 Urocanase Rossmann-like domain BKD03_RS01905 PF00221 Aromatic amino acid lyase BKD03_RS01910 PF01979 Amidohydrolase family BKD03_RS01915 PF01979 Amidohydrolase family BKD03_RS01935 PF01266 FAD dependent oxidoreductase BKD03_RS01940 PF01168 Alanine racemase, N-terminal domain BKD03_RS01940 PF00842 Alanine racemase, C-terminal domain BKD03_RS01945 PF01037 Lrp/AsnC ligand binding domain BKD03_RS01950 PF13505 Outer membrane protein beta-barrel domain BKD03_RS01965 PF01070 FMN-dependent dehydrogenase BKD03_RS01970 PF00384 Molybdopterin oxidoreductase BKD03_RS01990 PF00529 HlyD membrane-fusion protein of T1SS BKD03_RS01990 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BKD03_RS01995 PF00873 AcrB/AcrD/AcrF family BKD03_RS02000 PF07702 UTRA domain BKD03_RS02000 PF00392 Bacterial regulatory proteins, gntR family BKD03_RS02005 PF01380 SIS domain BKD03_RS02010 PF01979 Amidohydrolase family BKD03_RS02015 PF13580 SIS domain BKD03_RS02020 PF00551 Formyl transferase BKD03_RS02030 PF00171 Aldehyde dehydrogenase family BKD03_RS02035 PF07063 Domain of unknown function (DUF1338) BKD03_RS02045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD03_RS02045 PF03466 LysR substrate binding domain BKD03_RS02050 PF01266 FAD dependent oxidoreductase BKD03_RS02055 PF17674 HHH domain BKD03_RS02055 PF00575 S1 RNA binding domain BKD03_RS02055 PF09371 Tex-like protein N-terminal domain BKD03_RS02055 PF16921 Tex protein YqgF-like domain BKD03_RS02065 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BKD03_RS02075 PF00491 Arginase family BKD03_RS02080 PF02423 Ornithine cyclodeaminase/mu-crystallin family BKD03_RS02100 PF00085 Thioredoxin BKD03_RS02105 PF05362 Lon protease (S16) C-terminal proteolytic domain BKD03_RS02105 PF00004 ATPase family associated with various cellular activities (AAA) BKD03_RS02105 PF02190 ATP-dependent protease La (LON) substrate-binding domain BKD03_RS02110 PF03966 Trm112p-like protein BKD03_RS02120 PF00180 Isocitrate/isopropylmalate dehydrogenase BKD03_RS02125 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BKD03_RS02125 PF02805 Metal binding domain of Ada BKD03_RS02125 PF12833 Helix-turn-helix domain BKD03_RS02125 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BKD03_RS02130 PF00083 Sugar (and other) transporter BKD03_RS02135 PF01118 Semialdehyde dehydrogenase, NAD binding domain BKD03_RS02135 PF02774 Semialdehyde dehydrogenase, dimerisation domain BKD03_RS02140 PF01047 MarR family BKD03_RS02145 PF02566 OsmC-like protein BKD03_RS02155 PF00694 Aconitase C-terminal domain BKD03_RS02180 PF01432 Peptidase family M3 BKD03_RS02190 PF00571 CBS domain BKD03_RS02190 PF03448 MgtE intracellular N domain BKD03_RS02190 PF01769 Divalent cation transporter BKD03_RS02195 PF00679 Elongation factor G C-terminus BKD03_RS02195 PF00009 Elongation factor Tu GTP binding domain BKD03_RS02195 PF03144 Elongation factor Tu domain 2 BKD03_RS02200 PF01205 Uncharacterized protein family UPF0029 BKD03_RS02215 PF01116 Fructose-bisphosphate aldolase class-II BKD03_RS02220 PF02502 Ribose/Galactose Isomerase BKD03_RS02225 PF00121 Triosephosphate isomerase BKD03_RS02230 PF08220 DeoR-like helix-turn-helix domain BKD03_RS02230 PF00455 DeoR C terminal sensor domain BKD03_RS02235 PF04198 Putative sugar-binding domain BKD03_RS02240 PF01261 Xylose isomerase-like TIM barrel BKD03_RS02245 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BKD03_RS02245 PF01266 FAD dependent oxidoreductase BKD03_RS02250 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BKD03_RS02250 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BKD03_RS02265 PF00005 ABC transporter BKD03_RS02270 PF02653 Branched-chain amino acid transport system / permease component BKD03_RS02280 PF13407 Periplasmic binding protein domain BKD03_RS02285 PF00455 DeoR C terminal sensor domain BKD03_RS02285 PF08220 DeoR-like helix-turn-helix domain BKD03_RS02305 PF00202 Aminotransferase class-III BKD03_RS02320 PF01565 FAD binding domain BKD03_RS02320 PF04030 D-arabinono-1,4-lactone oxidase BKD03_RS02335 PF00356 Bacterial regulatory proteins, lacI family BKD03_RS02340 PF01547 Bacterial extracellular solute-binding protein BKD03_RS02345 PF00528 Binding-protein-dependent transport system inner membrane component BKD03_RS02350 PF00528 Binding-protein-dependent transport system inner membrane component BKD03_RS02355 PF08402 TOBE domain BKD03_RS02355 PF00005 ABC transporter BKD03_RS02365 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BKD03_RS02365 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BKD03_RS02380 PF05977 Transmembrane secretion effector BKD03_RS02390 PF00462 Glutaredoxin BKD03_RS02395 PF07972 NrdI Flavodoxin like BKD03_RS02400 PF08343 Ribonucleotide reductase N-terminal BKD03_RS02400 PF02867 Ribonucleotide reductase, barrel domain BKD03_RS02400 PF00317 Ribonucleotide reductase, all-alpha domain BKD03_RS02405 PF00268 Ribonucleotide reductase, small chain BKD03_RS02415 PF03775 Septum formation inhibitor MinC, C-terminal domain BKD03_RS02420 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BKD03_RS02425 PF03776 Septum formation topological specificity factor MinE BKD03_RS02450 PF00528 Binding-protein-dependent transport system inner membrane component BKD03_RS02455 PF00528 Binding-protein-dependent transport system inner membrane component BKD03_RS02480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BKD03_RS02495 PF00282 Pyridoxal-dependent decarboxylase conserved domain BKD03_RS02500 PF13520 Amino acid permease BKD03_RS02505 PF04960 Glutaminase BKD03_RS02510 PF06411 HdeA/HdeB family BKD03_RS02525 PF00563 EAL domain BKD03_RS02525 PF12792 CSS motif domain associated with EAL BKD03_RS02535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD03_RS02535 PF03466 LysR substrate binding domain BKD03_RS02540 PF00483 Nucleotidyl transferase BKD03_RS02540 PF01050 Mannose-6-phosphate isomerase BKD03_RS02545 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BKD03_RS02545 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BKD03_RS02545 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BKD03_RS02545 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BKD03_RS02550 PF03576 Peptidase family S58 BKD03_RS02555 PF00654 Voltage gated chloride channel BKD03_RS02560 PF00478 IMP dehydrogenase / GMP reductase domain BKD03_RS02560 PF00571 CBS domain BKD03_RS02565 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BKD03_RS02570 PF03466 LysR substrate binding domain BKD03_RS02570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD03_RS02575 PF00199 Catalase BKD03_RS02575 PF06628 Catalase-related immune-responsive BKD03_RS02585 PF01029 NusB family BKD03_RS02585 PF01189 16S rRNA methyltransferase RsmB/F BKD03_RS02600 PF00117 Glutamine amidotransferase class-I BKD03_RS02600 PF02540 NAD synthase BKD03_RS02600 PF00958 GMP synthase C terminal domain BKD03_RS02610 PF12951 Passenger-associated-transport-repeat BKD03_RS02615 PF05284 Protein of unknown function (DUF736) BKD03_RS02625 PF08681 Protein of unknown function (DUF1778) BKD03_RS02670 PF02463 RecF/RecN/SMC N terminal domain BKD03_RS02685 PF10634 Fe2+ transport protein BKD03_RS02705 PF09363 XFP C-terminal domain BKD03_RS02705 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase BKD03_RS02705 PF09364 XFP N-terminal domain BKD03_RS02710 PF00871 Acetokinase family BKD03_RS02725 PF00392 Bacterial regulatory proteins, gntR family BKD03_RS02725 PF07729 FCD domain BKD03_RS02735 PF01488 Shikimate / quinate 5-dehydrogenase BKD03_RS02735 PF08501 Shikimate dehydrogenase substrate binding domain BKD03_RS02735 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BKD03_RS02740 PF05199 GMC oxidoreductase BKD03_RS02740 PF00732 GMC oxidoreductase BKD03_RS02745 PF00171 Aldehyde dehydrogenase family BKD03_RS02750 PF13458 Periplasmic binding protein BKD03_RS02755 PF08240 Alcohol dehydrogenase GroES-like domain BKD03_RS02755 PF00107 Zinc-binding dehydrogenase BKD03_RS02765 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BKD03_RS02765 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BKD03_RS02770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKD03_RS02770 PF00005 ABC transporter BKD03_RS02775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKD03_RS02775 PF00005 ABC transporter BKD03_RS02780 PF00701 Dihydrodipicolinate synthetase family BKD03_RS02790 PF00528 Binding-protein-dependent transport system inner membrane component BKD03_RS02795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKD03_RS02800 PF07729 FCD domain BKD03_RS02800 PF00392 Bacterial regulatory proteins, gntR family BKD03_RS02805 PF00480 ROK family BKD03_RS02805 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase BKD03_RS02825 PF00196 Bacterial regulatory proteins, luxR family BKD03_RS02825 PF00072 Response regulator receiver domain BKD03_RS02840 PF01370 NAD dependent epimerase/dehydratase family BKD03_RS02845 PF16363 GDP-mannose 4,6 dehydratase BKD03_RS02870 PF13505 Outer membrane protein beta-barrel domain BKD03_RS02875 PF00132 Bacterial transferase hexapeptide (six repeats) BKD03_RS02890 PF00535 Glycosyl transferase family 2 BKD03_RS02895 PF00953 Glycosyl transferase family 4 BKD03_RS02920 PF00534 Glycosyl transferases group 1 BKD03_RS02920 PF00862 Sucrose synthase BKD03_RS02925 PF00202 Aminotransferase class-III BKD03_RS02935 PF01370 NAD dependent epimerase/dehydratase family BKD03_RS02940 PF09940 Domain of unknown function (DUF2172) BKD03_RS02940 PF16254 Domain of unknown function (DUF4910) BKD03_RS02940 PF16221 winged helix-turn-helix BKD03_RS02945 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BKD03_RS02950 PF08421 Putative zinc binding domain BKD03_RS02950 PF08484 C-methyltransferase C-terminal domain BKD03_RS02960 PF02585 GlcNAc-PI de-N-acetylase BKD03_RS02965 PF00860 Permease family BKD03_RS02970 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BKD03_RS02970 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BKD03_RS02975 PF07690 Major Facilitator Superfamily BKD03_RS02980 PF03466 LysR substrate binding domain BKD03_RS02980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD03_RS02985 PF01641 SelR domain BKD03_RS02990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BKD03_RS02990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BKD03_RS02990 PF02770 Acyl-CoA dehydrogenase, middle domain BKD03_RS02995 PF02803 Thiolase, C-terminal domain BKD03_RS02995 PF00108 Thiolase, N-terminal domain BKD03_RS03000 PF00106 short chain dehydrogenase BKD03_RS03005 PF13193 AMP-binding enzyme C-terminal domain BKD03_RS03005 PF00501 AMP-binding enzyme BKD03_RS03010 PF12833 Helix-turn-helix domain BKD03_RS03010 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BKD03_RS03020 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BKD03_RS03020 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BKD03_RS03025 PF01327 Polypeptide deformylase BKD03_RS03030 PF05661 Protein of unknown function (DUF808) BKD03_RS03040 PF04143 Sulphur transport BKD03_RS03055 PF01594 AI-2E family transporter BKD03_RS03075 PF00005 ABC transporter BKD03_RS03090 PF00528 Binding-protein-dependent transport system inner membrane component BKD03_RS03095 PF00005 ABC transporter BKD03_RS03105 PF01047 MarR family BKD03_RS03115 PF13533 Biotin-lipoyl like BKD03_RS03125 PF04343 Protein of unknown function, DUF488 BKD03_RS03130 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKD03_RS03150 PF01235 Sodium:alanine symporter family BKD03_RS03160 PF04204 Homoserine O-succinyltransferase BKD03_RS03165 PF01183 Glycosyl hydrolases family 25 BKD03_RS03170 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BKD03_RS03170 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BKD03_RS03175 PF00202 Aminotransferase class-III BKD03_RS03185 PF00155 Aminotransferase class I and II BKD03_RS03190 PF04055 Radical SAM superfamily BKD03_RS03190 PF06968 Biotin and Thiamin Synthesis associated domain BKD03_RS03195 PF00083 Sugar (and other) transporter BKD03_RS03195 PF07690 Major Facilitator Superfamily BKD03_RS03210 PF07731 Multicopper oxidase BKD03_RS03210 PF00394 Multicopper oxidase BKD03_RS03210 PF07732 Multicopper oxidase BKD03_RS03210 PF10518 TAT (twin-arginine translocation) pathway signal sequence BKD03_RS03215 PF00080 Copper/zinc superoxide dismutase (SODC) BKD03_RS03225 PF01266 FAD dependent oxidoreductase BKD03_RS03230 PF00005 ABC transporter BKD03_RS03230 PF08402 TOBE domain BKD03_RS03255 PF02634 FdhD/NarQ family BKD03_RS03260 PF00885 6,7-dimethyl-8-ribityllumazine synthase BKD03_RS03265 PF01547 Bacterial extracellular solute-binding protein BKD03_RS03270 PF00528 Binding-protein-dependent transport system inner membrane component BKD03_RS03275 PF00528 Binding-protein-dependent transport system inner membrane component BKD03_RS03280 PF00005 ABC transporter BKD03_RS03280 PF08402 TOBE domain BKD03_RS03290 PF07690 Major Facilitator Superfamily BKD03_RS03300 PF01728 FtsJ-like methyltransferase BKD03_RS03305 PF02541 Ppx/GppA phosphatase family BKD03_RS03310 PF00005 ABC transporter BKD03_RS03315 PF00528 Binding-protein-dependent transport system inner membrane component BKD03_RS03320 PF00497 Bacterial extracellular solute-binding proteins, family 3 BKD03_RS03325 PF01968 Hydantoinase/oxoprolinase BKD03_RS03325 PF05378 Hydantoinase/oxoprolinase N-terminal region BKD03_RS03335 PF00005 ABC transporter BKD03_RS03340 PF01032 FecCD transport family BKD03_RS03345 PF01032 FecCD transport family BKD03_RS03350 PF01497 Periplasmic binding protein BKD03_RS03360 PF00171 Aldehyde dehydrogenase family BKD03_RS03370 PF00890 FAD binding domain BKD03_RS03385 PF01063 Amino-transferase class IV BKD03_RS03410 PF00860 Permease family BKD03_RS03420 PF03600 Citrate transporter BKD03_RS03420 PF02080 TrkA-C domain BKD03_RS03425 PF00005 ABC transporter BKD03_RS03425 PF08402 TOBE domain BKD03_RS03435 PF00528 Binding-protein-dependent transport system inner membrane component BKD03_RS03440 PF13416 Bacterial extracellular solute-binding protein BKD03_RS03445 PF01244 Membrane dipeptidase (Peptidase family M19) BKD03_RS03450 PF13382 Adenine deaminase C-terminal domain BKD03_RS03450 PF01979 Amidohydrolase family BKD03_RS03455 PF08402 TOBE domain BKD03_RS03455 PF00005 ABC transporter BKD03_RS03460 PF00005 ABC transporter BKD03_RS03460 PF12399 Branched-chain amino acid ATP-binding cassette transporter BKD03_RS03475 PF13458 Periplasmic binding protein BKD03_RS03480 PF10397 Adenylosuccinate lyase C-terminus BKD03_RS03480 PF00206 Lyase BKD03_RS03485 PF00775 Dioxygenase BKD03_RS03490 PF00775 Dioxygenase BKD03_RS03490 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal BKD03_RS03495 PF02627 Carboxymuconolactone decarboxylase family BKD03_RS03500 PF12697 Alpha/beta hydrolase family BKD03_RS03505 PF03466 LysR substrate binding domain BKD03_RS03505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD03_RS03510 PF01494 FAD binding domain BKD03_RS03520 PF01614 Bacterial transcriptional regulator BKD03_RS03520 PF09339 IclR helix-turn-helix domain BKD03_RS03525 PF01144 Coenzyme A transferase BKD03_RS03530 PF01144 Coenzyme A transferase BKD03_RS03535 PF02803 Thiolase, C-terminal domain BKD03_RS03535 PF00108 Thiolase, N-terminal domain BKD03_RS03540 PF07969 Amidohydrolase family BKD03_RS03555 PF00497 Bacterial extracellular solute-binding proteins, family 3 BKD03_RS03560 PF00497 Bacterial extracellular solute-binding proteins, family 3 BKD03_RS03565 PF01266 FAD dependent oxidoreductase BKD03_RS03585 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BKD03_RS03585 PF14579 Helix-hairpin-helix motif BKD03_RS03585 PF07733 Bacterial DNA polymerase III alpha NTPase domain BKD03_RS03585 PF02811 PHP domain BKD03_RS03585 PF00929 Exonuclease BKD03_RS03615 PF00990 Diguanylate cyclase, GGDEF domain BKD03_RS03615 PF13185 GAF domain BKD03_RS03615 PF00563 EAL domain BKD03_RS03630 PF11799 impB/mucB/samB family C-terminal domain BKD03_RS03630 PF00817 impB/mucB/samB family BKD03_RS03635 PF14760 Rnk N-terminus BKD03_RS03635 PF01272 Transcription elongation factor, GreA/GreB, C-term BKD03_RS03645 PF00072 Response regulator receiver domain BKD03_RS03650 PF00990 Diguanylate cyclase, GGDEF domain BKD03_RS03650 PF00072 Response regulator receiver domain BKD03_RS03655 PF00471 Ribosomal protein L33 BKD03_RS03675 PF00575 S1 RNA binding domain BKD03_RS03675 PF17876 Cold shock domain BKD03_RS03675 PF00773 RNB domain BKD03_RS03675 PF08461 Ribonuclease R winged-helix domain BKD03_RS03675 PF08206 Ribonuclease B OB domain BKD03_RS03680 PF01396 Topoisomerase DNA binding C4 zinc finger BKD03_RS03680 PF13368 Topoisomerase C-terminal repeat BKD03_RS03680 PF01751 Toprim domain BKD03_RS03680 PF01131 DNA topoisomerase BKD03_RS03685 PF17782 DprA winged helix domain BKD03_RS03685 PF02481 DNA recombination-mediator protein A BKD03_RS03690 PF02660 Glycerol-3-phosphate acyltransferase BKD03_RS03695 PF01979 Amidohydrolase family BKD03_RS03700 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BKD03_RS03700 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BKD03_RS03705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BKD03_RS03705 PF02770 Acyl-CoA dehydrogenase, middle domain BKD03_RS03705 PF18158 Adaptive response protein AidB N-terminal domain BKD03_RS03710 PF03652 Holliday junction resolvase BKD03_RS03720 PF02686 Glu-tRNAGln amidotransferase C subunit BKD03_RS03725 PF01425 Amidase BKD03_RS03740 PF01751 Toprim domain BKD03_RS03740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD03_RS03740 PF00986 DNA gyrase B subunit, carboxyl terminus BKD03_RS03740 PF00204 DNA gyrase B BKD03_RS03745 PF00892 EamA-like transporter family BKD03_RS03750 PF03099 Biotin/lipoate A/B protein ligase family BKD03_RS03755 PF13426 PAS domain BKD03_RS03755 PF07536 HWE histidine kinase BKD03_RS03755 PF08447 PAS fold BKD03_RS03760 PF07886 BA14K-like protein BKD03_RS03775 PF13361 UvrD-like helicase C-terminal domain BKD03_RS03775 PF00580 UvrD/REP helicase N-terminal domain BKD03_RS03790 PF08671 Anti-repressor SinI BKD03_RS03790 PF01381 Helix-turn-helix BKD03_RS03805 PF03706 Lysylphosphatidylglycerol synthase TM region BKD03_RS03805 PF09924 Uncharacterised conserved protein (DUF2156) BKD03_RS03810 PF02683 Cytochrome C biogenesis protein transmembrane region BKD03_RS03815 PF14602 Hexapeptide repeat of succinyl-transferase BKD03_RS03815 PF12804 MobA-like NTP transferase domain BKD03_RS03815 PF00132 Bacterial transferase hexapeptide (six repeats) BKD03_RS03820 PF01380 SIS domain BKD03_RS03825 PF00271 Helicase conserved C-terminal domain BKD03_RS03825 PF17191 RecG wedge domain BKD03_RS03825 PF00270 DEAD/DEAH box helicase BKD03_RS03830 PF03937 Flavinator of succinate dehydrogenase BKD03_RS03835 PF02559 CarD-like/TRCF domain BKD03_RS03835 PF00271 Helicase conserved C-terminal domain BKD03_RS03835 PF03461 TRCF domain BKD03_RS03835 PF17757 UvrB interaction domain BKD03_RS03835 PF00270 DEAD/DEAH box helicase BKD03_RS03845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKD03_RS03860 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal BKD03_RS03860 PF00676 Dehydrogenase E1 component BKD03_RS03865 PF02779 Transketolase, pyrimidine binding domain BKD03_RS03865 PF02780 Transketolase, C-terminal domain BKD03_RS03870 PF02817 e3 binding domain BKD03_RS03870 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BKD03_RS03870 PF00364 Biotin-requiring enzyme BKD03_RS03875 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BKD03_RS03875 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKD03_RS03895 PF01580 FtsK/SpoIIIE family BKD03_RS03895 PF09397 Ftsk gamma domain BKD03_RS03895 PF17854 FtsK alpha domain BKD03_RS03895 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BKD03_RS03900 PF03576 Peptidase family S58 BKD03_RS03905 PF07690 Major Facilitator Superfamily BKD03_RS03915 PF13532 2OG-Fe(II) oxygenase superfamily BKD03_RS03920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKD03_RS03920 PF00005 ABC transporter BKD03_RS03925 PF00528 Binding-protein-dependent transport system inner membrane component BKD03_RS03925 PF12911 N-terminal TM domain of oligopeptide transport permease C BKD03_RS03930 PF00528 Binding-protein-dependent transport system inner membrane component BKD03_RS03935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKD03_RS03940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKD03_RS03955 PF16363 GDP-mannose 4,6 dehydratase BKD03_RS03960 PF16363 GDP-mannose 4,6 dehydratase BKD03_RS03970 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BKD03_RS03970 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BKD03_RS03970 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BKD03_RS04025 PF01381 Helix-turn-helix BKD03_RS04035 PF00239 Resolvase, N terminal domain BKD03_RS04035 PF02796 Helix-turn-helix domain of resolvase BKD03_RS04085 PF04073 Aminoacyl-tRNA editing domain BKD03_RS04090 PF02082 Transcriptional regulator BKD03_RS04105 PF00210 Ferritin-like domain BKD03_RS04110 PF04055 Radical SAM superfamily BKD03_RS04110 PF00919 Uncharacterized protein family UPF0004 BKD03_RS04110 PF18693 TRAM domain BKD03_RS04120 PF02608 ABC transporter substrate-binding protein PnrA-like BKD03_RS04125 PF02653 Branched-chain amino acid transport system / permease component BKD03_RS04130 PF02653 Branched-chain amino acid transport system / permease component BKD03_RS04135 PF00005 ABC transporter BKD03_RS04140 PF08240 Alcohol dehydrogenase GroES-like domain BKD03_RS04140 PF00107 Zinc-binding dehydrogenase BKD03_RS04145 PF01066 CDP-alcohol phosphatidyltransferase BKD03_RS04150 PF01494 FAD binding domain BKD03_RS04160 PF00005 ABC transporter BKD03_RS04160 PF08402 TOBE domain BKD03_RS04165 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BKD03_RS04165 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BKD03_RS04170 PF00528 Binding-protein-dependent transport system inner membrane component BKD03_RS04175 PF00528 Binding-protein-dependent transport system inner membrane component BKD03_RS04190 PF01869 BadF/BadG/BcrA/BcrD ATPase family BKD03_RS04195 PF00392 Bacterial regulatory proteins, gntR family BKD03_RS04195 PF07702 UTRA domain BKD03_RS04200 PF08173 Membrane bound YbgT-like protein BKD03_RS04205 PF02322 Cytochrome bd terminal oxidase subunit II BKD03_RS04210 PF01654 Cytochrome bd terminal oxidase subunit I BKD03_RS04215 PF00664 ABC transporter transmembrane region BKD03_RS04215 PF00005 ABC transporter BKD03_RS04220 PF00664 ABC transporter transmembrane region BKD03_RS04220 PF00005 ABC transporter BKD03_RS04235 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) BKD03_RS04240 PF01899 Na+/H+ ion antiporter subunit BKD03_RS04245 PF00361 Proton-conducting membrane transporter BKD03_RS04250 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BKD03_RS04255 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BKD03_RS04255 PF13244 Domain of unknown function (DUF4040) BKD03_RS04255 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter BKD03_RS04255 PF00361 Proton-conducting membrane transporter BKD03_RS04270 PF00994 Probable molybdopterin binding domain BKD03_RS04280 PF02371 Transposase IS116/IS110/IS902 family BKD03_RS04280 PF01548 Transposase BKD03_RS04295 PF02627 Carboxymuconolactone decarboxylase family BKD03_RS04300 PF00578 AhpC/TSA family BKD03_RS04305 PF03466 LysR substrate binding domain BKD03_RS04305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD03_RS04310 PF11972 HTH DNA binding domain BKD03_RS04310 PF07756 Protein of unknown function (DUF1612) BKD03_RS04315 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BKD03_RS04315 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BKD03_RS04325 PF00294 pfkB family carbohydrate kinase BKD03_RS04330 PF00205 Thiamine pyrophosphate enzyme, central domain BKD03_RS04330 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BKD03_RS04330 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BKD03_RS04335 PF01261 Xylose isomerase-like TIM barrel BKD03_RS04340 PF04962 KduI/IolB family BKD03_RS04345 PF00459 Inositol monophosphatase family BKD03_RS04350 PF00005 ABC transporter BKD03_RS04350 PF08402 TOBE domain BKD03_RS04355 PF00528 Binding-protein-dependent transport system inner membrane component BKD03_RS04365 PF14850 DNA-binding domain of Proline dehydrogenase BKD03_RS04365 PF01619 Proline dehydrogenase BKD03_RS04365 PF00171 Aldehyde dehydrogenase family BKD03_RS04365 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BKD03_RS04370 PF01037 Lrp/AsnC ligand binding domain BKD03_RS04380 PF02347 Glycine cleavage system P-protein BKD03_RS04385 PF01597 Glycine cleavage H-protein BKD03_RS04390 PF08669 Glycine cleavage T-protein C-terminal barrel domain BKD03_RS04390 PF01571 Aminomethyltransferase folate-binding domain BKD03_RS04400 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKD03_RS04400 PF14759 Reductase C-terminal BKD03_RS04415 PF00120 Glutamine synthetase, catalytic domain BKD03_RS04420 PF00465 Iron-containing alcohol dehydrogenase BKD03_RS04425 PF07886 BA14K-like protein BKD03_RS04440 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BKD03_RS04445 PF00528 Binding-protein-dependent transport system inner membrane component BKD03_RS04450 PF00571 CBS domain BKD03_RS04450 PF00005 ABC transporter BKD03_RS04465 PF14031 Putative serine dehydratase domain BKD03_RS04465 PF01168 Alanine racemase, N-terminal domain BKD03_RS04470 PF01380 SIS domain BKD03_RS04470 PF01418 Helix-turn-helix domain, rpiR family BKD03_RS04475 PF08402 TOBE domain BKD03_RS04475 PF00005 ABC transporter BKD03_RS04485 PF01547 Bacterial extracellular solute-binding protein BKD03_RS04490 PF00528 Binding-protein-dependent transport system inner membrane component BKD03_RS04495 PF00528 Binding-protein-dependent transport system inner membrane component BKD03_RS04500 PF01042 Endoribonuclease L-PSP BKD03_RS04505 PF07171 MlrC C-terminus BKD03_RS04505 PF07364 Metallopeptidase family M81 BKD03_RS04515 PF00005 ABC transporter BKD03_RS04535 PF13533 Biotin-lipoyl like BKD03_RS04550 PF01047 MarR family BKD03_RS04555 PF04452 RNA methyltransferase BKD03_RS04560 PF04107 Glutamate-cysteine ligase family 2(GCS2) BKD03_RS04565 PF13742 OB-fold nucleic acid binding domain BKD03_RS04565 PF02601 Exonuclease VII, large subunit BKD03_RS04570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD03_RS04570 PF03466 LysR substrate binding domain BKD03_RS04585 PF00120 Glutamine synthetase, catalytic domain BKD03_RS04595 PF01266 FAD dependent oxidoreductase BKD03_RS04610 PF01037 Lrp/AsnC ligand binding domain BKD03_RS04630 PF07690 Major Facilitator Superfamily BKD03_RS04640 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BKD03_RS04640 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BKD03_RS04645 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BKD03_RS04655 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BKD03_RS04655 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BKD03_RS04660 PF14748 Pyrroline-5-carboxylate reductase dimerisation BKD03_RS04660 PF03807 NADP oxidoreductase coenzyme F420-dependent BKD03_RS04665 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKD03_RS04665 PF00005 ABC transporter BKD03_RS04670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKD03_RS04670 PF00005 ABC transporter BKD03_RS04675 PF00528 Binding-protein-dependent transport system inner membrane component BKD03_RS04680 PF00528 Binding-protein-dependent transport system inner membrane component BKD03_RS04685 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKD03_RS04695 PF00484 Carbonic anhydrase BKD03_RS04705 PF01921 tRNA synthetases class I (K) BKD03_RS04720 PF00378 Enoyl-CoA hydratase/isomerase BKD03_RS04720 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BKD03_RS04720 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BKD03_RS04725 PF02803 Thiolase, C-terminal domain BKD03_RS04725 PF00108 Thiolase, N-terminal domain BKD03_RS04730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BKD03_RS04730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BKD03_RS04730 PF12806 Acetyl-CoA dehydrogenase C-terminal like BKD03_RS04730 PF02770 Acyl-CoA dehydrogenase, middle domain BKD03_RS04740 PF03466 LysR substrate binding domain BKD03_RS04740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD03_RS04745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BKD03_RS04745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BKD03_RS04745 PF02770 Acyl-CoA dehydrogenase, middle domain BKD03_RS04755 PF00005 ABC transporter BKD03_RS04760 PF00528 Binding-protein-dependent transport system inner membrane component BKD03_RS04765 PF00528 Binding-protein-dependent transport system inner membrane component BKD03_RS04770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKD03_RS04775 PF08753 NikR C terminal nickel binding domain BKD03_RS04775 PF01402 Ribbon-helix-helix protein, copG family BKD03_RS04780 PF00873 AcrB/AcrD/AcrF family BKD03_RS04785 PF13533 Biotin-lipoyl like BKD03_RS04795 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BKD03_RS04800 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BKD03_RS04805 PF02641 Uncharacterized ACR, COG1993 BKD03_RS04810 PF13411 MerR HTH family regulatory protein BKD03_RS04820 PF01925 Sulfite exporter TauE/SafE BKD03_RS04835 PF00270 DEAD/DEAH box helicase BKD03_RS04835 PF08494 DEAD/H associated BKD03_RS04835 PF00271 Helicase conserved C-terminal domain BKD03_RS04865 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) BKD03_RS04890 PF00756 Putative esterase BKD03_RS04895 PF07715 TonB-dependent Receptor Plug Domain BKD03_RS04895 PF00593 TonB dependent receptor BKD03_RS04905 PF01497 Periplasmic binding protein BKD03_RS04910 PF01032 FecCD transport family BKD03_RS04915 PF01032 FecCD transport family BKD03_RS04920 PF00005 ABC transporter BKD03_RS04930 PF00672 HAMP domain BKD03_RS04930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD03_RS04930 PF07730 Histidine kinase BKD03_RS04935 PF00196 Bacterial regulatory proteins, luxR family BKD03_RS04935 PF00072 Response regulator receiver domain BKD03_RS04950 PF07690 Major Facilitator Superfamily BKD03_RS04955 PF01568 Molydopterin dinucleotide binding domain BKD03_RS04955 PF14710 Respiratory nitrate reductase alpha N-terminal BKD03_RS04955 PF00384 Molybdopterin oxidoreductase BKD03_RS04960 PF14711 Respiratory nitrate reductase beta C-terminal BKD03_RS04960 PF13247 4Fe-4S dicluster domain BKD03_RS04965 PF02613 Nitrate reductase delta subunit BKD03_RS04970 PF02665 Nitrate reductase gamma subunit BKD03_RS04975 PF00639 PPIC-type PPIASE domain BKD03_RS04975 PF09312 SurA N-terminal domain BKD03_RS04985 PF02441 Flavoprotein BKD03_RS04990 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase BKD03_RS05000 PF01136 Peptidase family U32 BKD03_RS05010 PF00005 ABC transporter BKD03_RS05015 PF00528 Binding-protein-dependent transport system inner membrane component BKD03_RS05035 PF00127 Copper binding proteins, plastocyanin/azurin family BKD03_RS05045 PF02424 ApbE family BKD03_RS05055 PF12679 ABC-2 family transporter protein BKD03_RS05060 PF00005 ABC transporter BKD03_RS05065 PF05048 Periplasmic copper-binding protein (NosD) BKD03_RS05070 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BKD03_RS05070 PF18793 Nitrous oxide reductase propeller repeat 2 BKD03_RS05070 PF18764 Nitrous oxide reductase propeller repeat BKD03_RS05075 PF12801 4Fe-4S binding domain BKD03_RS05075 PF04205 FMN-binding domain BKD03_RS05085 PF00005 ABC transporter BKD03_RS05085 PF06472 ABC transporter transmembrane region 2 BKD03_RS05110 PF07732 Multicopper oxidase BKD03_RS05110 PF00394 Multicopper oxidase BKD03_RS05115 PF00394 Multicopper oxidase BKD03_RS05115 PF07732 Multicopper oxidase BKD03_RS05140 PF01883 Iron-sulfur cluster assembly protein BKD03_RS05165 PF00092 von Willebrand factor type A domain BKD03_RS05170 PF07728 AAA domain (dynein-related subfamily) BKD03_RS05170 PF08406 CbbQ/NirQ/NorQ C-terminal BKD03_RS05175 PF00115 Cytochrome C and Quinol oxidase polypeptide I BKD03_RS05180 PF00034 Cytochrome c BKD03_RS05190 PF00510 Cytochrome c oxidase subunit III BKD03_RS05210 PF02615 Malate/L-lactate dehydrogenase BKD03_RS05215 PF00701 Dihydrodipicolinate synthetase family BKD03_RS05220 PF07729 FCD domain BKD03_RS05220 PF00392 Bacterial regulatory proteins, gntR family BKD03_RS05235 PF00563 EAL domain BKD03_RS05235 PF00990 Diguanylate cyclase, GGDEF domain BKD03_RS05235 PF03707 Bacterial signalling protein N terminal repeat BKD03_RS05240 PF02424 ApbE family BKD03_RS05245 PF00175 Oxidoreductase NAD-binding domain BKD03_RS05245 PF00667 FAD binding domain BKD03_RS05245 PF00258 Flavodoxin BKD03_RS05260 PF00486 Transcriptional regulatory protein, C terminal BKD03_RS05260 PF00072 Response regulator receiver domain BKD03_RS05265 PF00512 His Kinase A (phospho-acceptor) domain BKD03_RS05265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD03_RS05275 PF00376 MerR family regulatory protein BKD03_RS05275 PF09278 MerR, DNA binding BKD03_RS05280 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKD03_RS05280 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BKD03_RS05285 PF02515 CoA-transferase family III BKD03_RS05290 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BKD03_RS05290 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BKD03_RS05290 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain BKD03_RS05295 PF00378 Enoyl-CoA hydratase/isomerase BKD03_RS05300 PF09339 IclR helix-turn-helix domain BKD03_RS05305 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BKD03_RS05305 PF02770 Acyl-CoA dehydrogenase, middle domain BKD03_RS05305 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BKD03_RS05310 PF07690 Major Facilitator Superfamily BKD03_RS05320 PF01119 DNA mismatch repair protein, C-terminal domain BKD03_RS05320 PF08676 MutL C terminal dimerisation domain BKD03_RS05330 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BKD03_RS05335 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BKD03_RS05355 PF01523 Putative modulator of DNA gyrase BKD03_RS05360 PF02254 TrkA-N domain BKD03_RS05360 PF00999 Sodium/hydrogen exchanger family BKD03_RS05365 PF01734 Patatin-like phospholipase BKD03_RS05370 PF05193 Peptidase M16 inactive domain BKD03_RS05375 PF00675 Insulinase (Peptidase family M16) BKD03_RS05375 PF05193 Peptidase M16 inactive domain BKD03_RS05385 PF01479 S4 domain BKD03_RS05385 PF00849 RNA pseudouridylate synthase BKD03_RS05390 PF14437 MafB19-like deaminase BKD03_RS05405 PF00133 tRNA synthetases class I (I, L, M and V) BKD03_RS05405 PF08264 Anticodon-binding domain of tRNA BKD03_RS05410 PF01687 Riboflavin kinase BKD03_RS05410 PF06574 FAD synthetase BKD03_RS05425 PF00166 Chaperonin 10 Kd subunit BKD03_RS05430 PF00118 TCP-1/cpn60 chaperonin family BKD03_RS05445 PF00206 Lyase BKD03_RS05445 PF10415 Fumarase C C-terminus BKD03_RS05450 PF07681 DoxX BKD03_RS05460 PF07690 Major Facilitator Superfamily BKD03_RS05465 PF02371 Transposase IS116/IS110/IS902 family BKD03_RS05465 PF01548 Transposase BKD03_RS05470 PF01634 ATP phosphoribosyltransferase BKD03_RS05475 PF13393 Histidyl-tRNA synthetase BKD03_RS05480 PF03129 Anticodon binding domain BKD03_RS05480 PF13393 Histidyl-tRNA synthetase BKD03_RS05490 PF03352 Methyladenine glycosylase BKD03_RS05495 PF03734 L,D-transpeptidase catalytic domain BKD03_RS05495 PF01476 LysM domain BKD03_RS05495 PF17969 L,D-transpeptidase C-terminal domain BKD03_RS05505 PF00248 Aldo/keto reductase family BKD03_RS05510 PF13183 4Fe-4S dicluster domain BKD03_RS05510 PF02754 Cysteine-rich domain BKD03_RS05515 PF01565 FAD binding domain BKD03_RS05515 PF02913 FAD linked oxidases, C-terminal domain BKD03_RS05520 PF02913 FAD linked oxidases, C-terminal domain BKD03_RS05520 PF01565 FAD binding domain BKD03_RS05525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD03_RS05525 PF03466 LysR substrate binding domain BKD03_RS05530 PF00171 Aldehyde dehydrogenase family BKD03_RS05535 PF00005 ABC transporter BKD03_RS05540 PF00497 Bacterial extracellular solute-binding proteins, family 3 BKD03_RS05545 PF00355 Rieske [2Fe-2S] domain BKD03_RS05545 PF01266 FAD dependent oxidoreductase BKD03_RS05550 PF00528 Binding-protein-dependent transport system inner membrane component BKD03_RS05555 PF00202 Aminotransferase class-III BKD03_RS05560 PF01546 Peptidase family M20/M25/M40 BKD03_RS05560 PF07687 Peptidase dimerisation domain BKD03_RS05580 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BKD03_RS05585 PF14497 Glutathione S-transferase, C-terminal domain BKD03_RS05585 PF02798 Glutathione S-transferase, N-terminal domain BKD03_RS05595 PF00990 Diguanylate cyclase, GGDEF domain BKD03_RS05595 PF17158 Membrane-associated sensor, integral membrane domain BKD03_RS05600 PF01266 FAD dependent oxidoreductase BKD03_RS05605 PF02811 PHP domain BKD03_RS05605 PF14579 Helix-hairpin-helix motif BKD03_RS05605 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BKD03_RS05605 PF07733 Bacterial DNA polymerase III alpha NTPase domain BKD03_RS05605 PF00929 Exonuclease BKD03_RS05610 PF01425 Amidase BKD03_RS05615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKD03_RS05615 PF00005 ABC transporter BKD03_RS05620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKD03_RS05620 PF00005 ABC transporter BKD03_RS05625 PF00528 Binding-protein-dependent transport system inner membrane component BKD03_RS05625 PF12911 N-terminal TM domain of oligopeptide transport permease C BKD03_RS05630 PF00528 Binding-protein-dependent transport system inner membrane component BKD03_RS05635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKD03_RS05645 PF00171 Aldehyde dehydrogenase family BKD03_RS05650 PF00392 Bacterial regulatory proteins, gntR family BKD03_RS05650 PF07729 FCD domain BKD03_RS05655 PF07690 Major Facilitator Superfamily BKD03_RS05695 PF01042 Endoribonuclease L-PSP BKD03_RS05705 PF00468 Ribosomal protein L34 BKD03_RS05710 PF00825 Ribonuclease P BKD03_RS05715 PF02096 60Kd inner membrane protein BKD03_RS05715 PF14849 YidC periplasmic domain BKD03_RS05725 PF01926 50S ribosome-binding GTPase BKD03_RS05730 PF00696 Amino acid kinase family BKD03_RS05750 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal BKD03_RS05750 PF14602 Hexapeptide repeat of succinyl-transferase BKD03_RS05750 PF00132 Bacterial transferase hexapeptide (six repeats) BKD03_RS05760 PF07687 Peptidase dimerisation domain BKD03_RS05760 PF01546 Peptidase family M20/M25/M40 BKD03_RS05770 PF01416 tRNA pseudouridine synthase BKD03_RS05775 PF00551 Formyl transferase BKD03_RS05775 PF02911 Formyl transferase, C-terminal domain BKD03_RS05780 PF01327 Polypeptide deformylase BKD03_RS05800 PF03144 Elongation factor Tu domain 2 BKD03_RS05800 PF06421 GTP-binding protein LepA C-terminus BKD03_RS05800 PF00009 Elongation factor Tu GTP binding domain BKD03_RS05800 PF00679 Elongation factor G C-terminus BKD03_RS05810 PF02673 Bacitracin resistance protein BacA BKD03_RS05820 PF00043 Glutathione S-transferase, C-terminal domain BKD03_RS05820 PF13417 Glutathione S-transferase, N-terminal domain BKD03_RS05825 PF08331 Domain of unknown function (DUF1730) BKD03_RS05835 PF03411 Penicillin-insensitive murein endopeptidase BKD03_RS05840 PF02142 MGS-like domain BKD03_RS05845 PF02685 Glucokinase BKD03_RS05860 PF05173 Dihydrodipicolinate reductase, C-terminus BKD03_RS05860 PF01113 Dihydrodipicolinate reductase, N-terminus BKD03_RS05865 PF00300 Histidine phosphatase superfamily (branch 1) BKD03_RS05875 PF01979 Amidohydrolase family BKD03_RS05900 PF00664 ABC transporter transmembrane region BKD03_RS05900 PF00005 ABC transporter BKD03_RS05905 PF00005 ABC transporter BKD03_RS05910 PF00664 ABC transporter transmembrane region BKD03_RS05910 PF00005 ABC transporter BKD03_RS05915 PF00005 ABC transporter BKD03_RS05915 PF00664 ABC transporter transmembrane region BKD03_RS06385 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BKD03_RS06385 PF07559 Flagellar basal body protein FlaE BKD03_RS06385 PF00460 Flagella basal body rod protein BKD03_RS06730 PF07715 TonB-dependent Receptor Plug Domain BKD03_RS06730 PF00593 TonB dependent receptor BKD03_RS06760 PF13458 Periplasmic binding protein BKD03_RS06785 PF00403 Heavy-metal-associated domain BKD03_RS06840 PF02653 Branched-chain amino acid transport system / permease component BKD03_RS06965 PF00676 Dehydrogenase E1 component BKD03_RS06975 PF02817 e3 binding domain BKD03_RS06975 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BKD03_RS06975 PF00364 Biotin-requiring enzyme BKD03_RS06985 PF08501 Shikimate dehydrogenase substrate binding domain BKD03_RS06985 PF01488 Shikimate / quinate 5-dehydrogenase BKD03_RS06985 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BKD03_RS07010 PF00690 Cation transporter/ATPase, N-terminus BKD03_RS07010 PF00689 Cation transporting ATPase, C-terminus BKD03_RS07020 PF02308 MgtC family BKD03_RS07225 PF00117 Glutamine amidotransferase class-I BKD03_RS07225 PF04715 Anthranilate synthase component I, N terminal region BKD03_RS07225 PF00425 chorismate binding enzyme BKD03_RS07395 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BKD03_RS07395 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BKD03_RS07810 PF00528 Binding-protein-dependent transport system inner membrane component BKD03_RS07840 PF12399 Branched-chain amino acid ATP-binding cassette transporter BKD03_RS07840 PF00005 ABC transporter BKD03_RS07960 PF13407 Periplasmic binding protein domain BKD03_RS08210 PF17674 HHH domain BKD03_RS08210 PF00575 S1 RNA binding domain BKD03_RS08210 PF16921 Tex protein YqgF-like domain BKD03_RS08210 PF09371 Tex-like protein N-terminal domain BKD03_RS08790 PF08681 Protein of unknown function (DUF1778) BKD03_RS09010 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase BKD03_RS09010 PF00480 ROK family BKD03_RS09130 PF00202 Aminotransferase class-III BKD03_RS09195 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BKD03_RS09195 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BKD03_RS09285 PF00005 ABC transporter BKD03_RS09380 PF07690 Major Facilitator Superfamily BKD03_RS09380 PF00083 Sugar (and other) transporter BKD03_RS09385 PF07690 Major Facilitator Superfamily BKD03_RS09385 PF00083 Sugar (and other) transporter BKD03_RS09690 PF13416 Bacterial extracellular solute-binding protein BKD03_RS09970 PF00986 DNA gyrase B subunit, carboxyl terminus BKD03_RS09970 PF01751 Toprim domain BKD03_RS09970 PF00204 DNA gyrase B BKD03_RS09970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD03_RS10030 PF13361 UvrD-like helicase C-terminal domain BKD03_RS10030 PF00580 UvrD/REP helicase N-terminal domain BKD03_RS10030 PF12462 DNA helicase IV / RNA helicase N terminal BKD03_RS10140 PF00676 Dehydrogenase E1 component BKD03_RS10140 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal BKD03_RS10175 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BKD03_RS10175 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKD03_RS10205 PF07690 Major Facilitator Superfamily BKD03_RS10325 PF00919 Uncharacterized protein family UPF0004 BKD03_RS10325 PF18693 TRAM domain BKD03_RS10325 PF04055 Radical SAM superfamily BKD03_RS10370 PF01066 CDP-alcohol phosphatidyltransferase BKD03_RS10455 PF00005 ABC transporter BKD03_RS10455 PF00664 ABC transporter transmembrane region BKD03_RS10485 PF00361 Proton-conducting membrane transporter BKD03_RS10605 PF00528 Binding-protein-dependent transport system inner membrane component BKD03_RS10680 PF00465 Iron-containing alcohol dehydrogenase BKD03_RS10745 PF00528 Binding-protein-dependent transport system inner membrane component BKD03_RS10750 PF00528 Binding-protein-dependent transport system inner membrane component BKD03_RS11005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKD03_RS11015 PF00873 AcrB/AcrD/AcrF family BKD03_RS11380 PF12679 ABC-2 family transporter protein BKD03_RS11400 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BKD03_RS11400 PF18793 Nitrous oxide reductase propeller repeat 2 BKD03_RS11400 PF18764 Nitrous oxide reductase propeller repeat BKD03_RS11575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKD03_RS11575 PF00512 His Kinase A (phospho-acceptor) domain BKD03_RS11840 PF01548 Transposase BKD03_RS11840 PF02371 Transposase IS116/IS110/IS902 family BKD03_RS11875 PF00248 Aldo/keto reductase family BKD03_RS11925 PF00171 Aldehyde dehydrogenase family BKD03_RS11930 PF00171 Aldehyde dehydrogenase family BKD03_RS12035 PF00528 Binding-protein-dependent transport system inner membrane component BKD03_RS12035 PF12911 N-terminal TM domain of oligopeptide transport permease C BKD03_RS12040 PF00528 Binding-protein-dependent transport system inner membrane component BKD03_RS12235 PF02685 Glucokinase BKD03_RS12445 PF00873 AcrB/AcrD/AcrF family BKD03_RS12500 PF00521 DNA gyrase/topoisomerase IV, subunit A BKD03_RS12500 PF03989 DNA gyrase C-terminal domain, beta-propeller BKD03_RS12725 PF01458 Uncharacterized protein family (UPF0051) BKD03_RS12775 PF00912 Transglycosylase BKD03_RS12775 PF17092 Penicillin-binding protein OB-like domain BKD03_RS12775 PF00905 Penicillin binding protein transpeptidase domain BKD03_RS12865 PF01134 Glucose inhibited division protein A BKD03_RS13025 PF00497 Bacterial extracellular solute-binding proteins, family 3 BKD03_RS13065 PF00109 Beta-ketoacyl synthase, N-terminal domain BKD03_RS13065 PF02801 Beta-ketoacyl synthase, C-terminal domain BKD03_RS13130 PF01259 SAICAR synthetase BKD03_RS13375 PF01118 Semialdehyde dehydrogenase, NAD binding domain BKD03_RS13435 PF03030 Inorganic H+ pyrophosphatase BKD03_RS13470 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BKD03_RS13470 PF01872 RibD C-terminal domain BKD03_RS13570 PF13090 Polyphosphate kinase C-terminal domain 2 BKD03_RS13570 PF02503 Polyphosphate kinase middle domain BKD03_RS13570 PF13089 Polyphosphate kinase N-terminal domain BKD03_RS13570 PF17941 Polyphosphate kinase C-terminal domain 1 BKD03_RS13715 PF00384 Molybdopterin oxidoreductase BKD03_RS13715 PF01568 Molydopterin dinucleotide binding domain BKD03_RS13715 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BKD03_RS13980 PF02824 TGS domain BKD03_RS13980 PF04607 Region found in RelA / SpoT proteins BKD03_RS13980 PF13291 ACT domain BKD03_RS14160 PF08335 GlnD PII-uridylyltransferase BKD03_RS14160 PF03710 Glutamate-ammonia ligase adenylyltransferase BKD03_RS14485 PF00171 Aldehyde dehydrogenase family BKD03_RS14920 PF00772 DnaB-like helicase N terminal domain BKD03_RS14920 PF03796 DnaB-like helicase C terminal domain BKD03_RS14950 PF00156 Phosphoribosyl transferase domain BKD03_RS14950 PF13537 Glutamine amidotransferase domain BKD03_RS15260 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BKD03_RS15260 PF01926 50S ribosome-binding GTPase BKD03_RS15375 PF00115 Cytochrome C and Quinol oxidase polypeptide I BKD03_RS15460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKD03_RS15460 PF03466 LysR substrate binding domain BKD03_RS15510 PF03480 Bacterial extracellular solute-binding protein, family 7 BKD03_RS15840 PF02498 BRO family, N-terminal domain BKD03_RS15840 PF10548 P22AR C-terminal domain BKD03_RS16140 PF17806 Sarcosine oxidase A3 domain BKD03_RS16140 PF01571 Aminomethyltransferase folate-binding domain BKD03_RS16140 PF08669 Glycine cleavage T-protein C-terminal barrel domain BKD03_RS16140 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKD03_RS16415 PF01025 GrpE BKD03_RS16550 PF03023 Lipid II flippase MurJ BKD03_RS16715 PF00270 DEAD/DEAH box helicase BKD03_RS16715 PF00271 Helicase conserved C-terminal domain BKD03_RS17160 PF00115 Cytochrome C and Quinol oxidase polypeptide I BKD03_RS17210 PF00800 Prephenate dehydratase BKD03_RS17210 PF01817 Chorismate mutase type II BKD03_RS17210 PF01842 ACT domain BKD03_RS17275 PF00575 S1 RNA binding domain