locus-tag class description TI82_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix TI82_RS00005 PF00308 Bacterial dnaA protein TI82_RS00005 PF11638 DnaA N-terminal domain TI82_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain TI82_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain TI82_RS00010 PF02767 DNA polymerase III beta subunit, central domain TI82_RS00015 PF02463 RecF/RecN/SMC N terminal domain TI82_RS00020 PF00581 Rhodanese-like domain TI82_RS00020 PF00899 ThiF family TI82_RS00025 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TI82_RS00030 PF00005 ABC transporter TI82_RS00030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TI82_RS00035 PF12911 N-terminal TM domain of oligopeptide transport permease C TI82_RS00035 PF00528 Binding-protein-dependent transport system inner membrane component TI82_RS00040 PF00528 Binding-protein-dependent transport system inner membrane component TI82_RS00045 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TI82_RS00050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TI82_RS00065 PF13458 Periplasmic binding protein TI82_RS00070 PF00378 Enoyl-CoA hydratase/isomerase TI82_RS00075 PF00682 HMGL-like TI82_RS00080 PF00364 Biotin-requiring enzyme TI82_RS00080 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TI82_RS00080 PF02785 Biotin carboxylase C-terminal domain TI82_RS00080 PF00289 Biotin carboxylase, N-terminal domain TI82_RS00085 PF01039 Carboxyl transferase domain TI82_RS00090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TI82_RS00090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TI82_RS00090 PF02770 Acyl-CoA dehydrogenase, middle domain TI82_RS00095 PF13193 AMP-binding enzyme C-terminal domain TI82_RS00095 PF00501 AMP-binding enzyme TI82_RS00120 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TI82_RS00125 PF02224 Cytidylate kinase TI82_RS00130 PF00575 S1 RNA binding domain TI82_RS00135 PF03601 Conserved hypothetical protein 698 TI82_RS00140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TI82_RS00140 PF03466 LysR substrate binding domain TI82_RS00150 PF13406 Transglycosylase SLT domain TI82_RS00155 PF02132 RecR protein TI82_RS00155 PF13662 Toprim domain TI82_RS00160 PF02575 YbaB/EbfC DNA-binding family TI82_RS00165 PF12169 DNA polymerase III subunits gamma and tau domain III TI82_RS00165 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding TI82_RS00165 PF12170 DNA polymerase III tau subunit V interacting with alpha TI82_RS00175 PF00293 NUDIX domain TI82_RS00175 PF09297 NADH pyrophosphatase zinc ribbon domain TI82_RS00180 PF01817 Chorismate mutase type II TI82_RS00180 PF00800 Prephenate dehydratase TI82_RS00185 PF02348 Cytidylyltransferase TI82_RS00190 PF00034 Cytochrome c TI82_RS00200 PF00116 Cytochrome C oxidase subunit II, periplasmic domain TI82_RS00200 PF06481 COX Aromatic Rich Motif TI82_RS00205 PF00115 Cytochrome C and Quinol oxidase polypeptide I TI82_RS00210 PF00510 Cytochrome c oxidase subunit III TI82_RS00215 PF03626 Prokaryotic Cytochrome C oxidase subunit IV TI82_RS00235 PF03734 L,D-transpeptidase catalytic domain TI82_RS00235 PF17969 L,D-transpeptidase C-terminal domain TI82_RS00260 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TI82_RS00265 PF01883 Iron-sulfur cluster assembly protein TI82_RS00265 PF10609 NUBPL iron-transfer P-loop NTPase TI82_RS00270 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TI82_RS00270 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TI82_RS00270 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TI82_RS00270 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TI82_RS00275 PF03466 LysR substrate binding domain TI82_RS00275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TI82_RS00280 PF12146 Serine aminopeptidase, S33 TI82_RS00290 PF01557 Fumarylacetoacetate (FAA) hydrolase family TI82_RS00315 PF03006 Haemolysin-III related TI82_RS00320 PF02811 PHP domain TI82_RS00320 PF01336 OB-fold nucleic acid binding domain TI82_RS00320 PF07733 Bacterial DNA polymerase III alpha NTPase domain TI82_RS00320 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TI82_RS00320 PF14579 Helix-hairpin-helix motif TI82_RS00335 PF05662 Coiled stalk of trimeric autotransporter adhesin TI82_RS00335 PF03895 YadA-like membrane anchor domain TI82_RS00335 PF05658 Head domain of trimeric autotransporter adhesin TI82_RS00345 PF00764 Arginosuccinate synthase TI82_RS00360 PF04055 Radical SAM superfamily TI82_RS00375 PF06803 Protein of unknown function (DUF1232) TI82_RS00380 PF01329 Pterin 4 alpha carbinolamine dehydratase TI82_RS00390 PF02834 LigT like Phosphoesterase TI82_RS00395 PF13472 GDSL-like Lipase/Acylhydrolase family TI82_RS00400 PF00005 ABC transporter TI82_RS00410 PF01027 Inhibitor of apoptosis-promoting Bax1 TI82_RS00430 PF00694 Aconitase C-terminal domain TI82_RS00430 PF00330 Aconitase family (aconitate hydratase) TI82_RS00435 PF00005 ABC transporter TI82_RS00440 PF03379 CcmB protein TI82_RS00445 PF01578 Cytochrome C assembly protein TI82_RS00455 PF08534 Redoxin TI82_RS00460 PF00920 Dehydratase family TI82_RS00470 PF00486 Transcriptional regulatory protein, C terminal TI82_RS00470 PF00072 Response regulator receiver domain TI82_RS00500 PF00528 Binding-protein-dependent transport system inner membrane component TI82_RS00505 PF00528 Binding-protein-dependent transport system inner membrane component TI82_RS00510 PF12857 TOBE-like domain TI82_RS00510 PF00005 ABC transporter TI82_RS00515 PF10091 Putative glucoamylase TI82_RS00515 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain TI82_RS00515 PF06165 Glycosyltransferase family 36 TI82_RS00520 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain TI82_RS00520 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family TI82_RS00525 PF02567 Phenazine biosynthesis-like protein TI82_RS00530 PF08241 Methyltransferase domain TI82_RS00535 PF00294 pfkB family carbohydrate kinase TI82_RS00545 PF00912 Transglycosylase TI82_RS00545 PF00905 Penicillin binding protein transpeptidase domain TI82_RS00550 PF13505 Outer membrane protein beta-barrel domain TI82_RS00555 PF13505 Outer membrane protein beta-barrel domain TI82_RS00560 PF00476 DNA polymerase family A TI82_RS00560 PF01612 3'-5' exonuclease TI82_RS00565 PF01546 Peptidase family M20/M25/M40 TI82_RS00565 PF07687 Peptidase dimerisation domain TI82_RS00570 PF01367 5'-3' exonuclease, C-terminal SAM fold TI82_RS00570 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain TI82_RS00570 PF00476 DNA polymerase family A TI82_RS00570 PF01612 3'-5' exonuclease TI82_RS00575 PF00270 DEAD/DEAH box helicase TI82_RS00575 PF00271 Helicase conserved C-terminal domain TI82_RS00580 PF00204 DNA gyrase B TI82_RS00580 PF00986 DNA gyrase B subunit, carboxyl terminus TI82_RS00580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TI82_RS00580 PF01751 Toprim domain TI82_RS00585 PF00756 Putative esterase TI82_RS00595 PF13673 Acetyltransferase (GNAT) domain TI82_RS00605 PF02583 Metal-sensitive transcriptional repressor TI82_RS00610 PF08482 ATP-dependent helicase C-terminal TI82_RS00610 PF00271 Helicase conserved C-terminal domain TI82_RS00610 PF04408 Helicase associated domain (HA2) TI82_RS00610 PF00270 DEAD/DEAH box helicase TI82_RS00615 PF00270 DEAD/DEAH box helicase TI82_RS00615 PF04408 Helicase associated domain (HA2) TI82_RS00615 PF00271 Helicase conserved C-terminal domain TI82_RS00615 PF08482 ATP-dependent helicase C-terminal TI82_RS00620 PF00512 His Kinase A (phospho-acceptor) domain TI82_RS00620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TI82_RS00625 PF13340 Putative transposase of IS4/5 family (DUF4096) TI82_RS00630 PF01609 Transposase DDE domain TI82_RS00635 PF00072 Response regulator receiver domain TI82_RS00645 PF17969 L,D-transpeptidase C-terminal domain TI82_RS00645 PF03734 L,D-transpeptidase catalytic domain TI82_RS00645 PF01476 LysM domain TI82_RS00650 PF01106 NifU-like domain TI82_RS00660 PF00579 tRNA synthetases class I (W and Y) TI82_RS00665 PF03023 Lipid II flippase MurJ TI82_RS00670 PF08335 GlnD PII-uridylyltransferase TI82_RS00670 PF01842 ACT domain TI82_RS00670 PF01966 HD domain TI82_RS00675 PF01515 Phosphate acetyl/butaryl transferase TI82_RS00675 PF00390 Malic enzyme, N-terminal domain TI82_RS00675 PF03949 Malic enzyme, NAD binding domain TI82_RS00680 PF05190 MutS family domain IV TI82_RS00680 PF00488 MutS domain V TI82_RS00680 PF01624 MutS domain I TI82_RS00680 PF05192 MutS domain III TI82_RS00680 PF05188 MutS domain II TI82_RS00690 PF01252 Signal peptidase (SPase) II TI82_RS00695 PF08032 RNA 2'-O ribose methyltransferase substrate binding TI82_RS00695 PF00588 SpoU rRNA Methylase family TI82_RS00700 PF02926 THUMP domain TI82_RS00700 PF10672 S-adenosylmethionine-dependent methyltransferase TI82_RS00700 PF01170 Putative RNA methylase family UPF0020 TI82_RS00710 PF00216 Bacterial DNA-binding protein TI82_RS00715 PF01343 Peptidase family S49 TI82_RS00725 PF03968 OstA-like protein TI82_RS00730 PF00005 ABC transporter TI82_RS00735 PF00309 Sigma-54 factor, Activator interacting domain (AID) TI82_RS00735 PF04963 Sigma-54 factor, core binding domain TI82_RS00735 PF04552 Sigma-54, DNA binding domain TI82_RS00740 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus TI82_RS00740 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein TI82_RS00745 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TI82_RS00755 PF00011 Hsp20/alpha crystallin family TI82_RS00765 PF10576 Iron-sulfur binding domain of endonuclease III TI82_RS00765 PF00633 Helix-hairpin-helix motif TI82_RS00765 PF00730 HhH-GPD superfamily base excision DNA repair protein TI82_RS00775 PF00294 pfkB family carbohydrate kinase TI82_RS00780 PF03458 UPF0126 domain TI82_RS00785 PF01025 GrpE TI82_RS00790 PF01628 HrcA protein C terminal domain TI82_RS00795 PF03725 3' exoribonuclease family, domain 2 TI82_RS00795 PF01138 3' exoribonuclease family, domain 1 TI82_RS00805 PF01725 Ham1 family TI82_RS00810 PF04055 Radical SAM superfamily TI82_RS00810 PF06969 HemN C-terminal domain TI82_RS00815 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TI82_RS00820 PF02021 Uncharacterised protein family UPF0102 TI82_RS00825 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TI82_RS00825 PF14824 Sirohaem biosynthesis protein central TI82_RS00825 PF10414 Sirohaem synthase dimerisation region TI82_RS00835 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain TI82_RS00835 PF01077 Nitrite and sulphite reductase 4Fe-4S domain TI82_RS00840 PF01507 Phosphoadenosine phosphosulfate reductase family TI82_RS00855 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain TI82_RS00865 PF07886 BA14K-like protein TI82_RS00870 PF00809 Pterin binding enzyme TI82_RS00870 PF02574 Homocysteine S-methyltransferase TI82_RS00870 PF02965 Vitamin B12 dependent methionine synthase, activation domain TI82_RS00870 PF02310 B12 binding domain TI82_RS00870 PF02607 B12 binding domain TI82_RS00875 PF03472 Autoinducer binding domain TI82_RS00875 PF00196 Bacterial regulatory proteins, luxR family TI82_RS00880 PF00202 Aminotransferase class-III TI82_RS00885 PF01507 Phosphoadenosine phosphosulfate reductase family TI82_RS00890 PF00009 Elongation factor Tu GTP binding domain TI82_RS00895 PF00459 Inositol monophosphatase family TI82_RS00910 PF00072 Response regulator receiver domain TI82_RS00910 PF00196 Bacterial regulatory proteins, luxR family TI82_RS00915 PF00455 DeoR C terminal sensor domain TI82_RS00915 PF08220 DeoR-like helix-turn-helix domain TI82_RS00920 PF16901 C-terminal domain of alpha-glycerophosphate oxidase TI82_RS00920 PF01266 FAD dependent oxidoreductase TI82_RS00930 PF00171 Aldehyde dehydrogenase family TI82_RS00935 PF08240 Alcohol dehydrogenase GroES-like domain TI82_RS00935 PF00107 Zinc-binding dehydrogenase TI82_RS00960 PF00171 Aldehyde dehydrogenase family TI82_RS00965 PF00528 Binding-protein-dependent transport system inner membrane component TI82_RS00970 PF03070 TENA/THI-4/PQQC family TI82_RS00975 PF09084 NMT1/THI5 like TI82_RS00980 PF02581 Thiamine monophosphate synthase TI82_RS00985 PF05690 Thiazole biosynthesis protein ThiG TI82_RS00995 PF01266 FAD dependent oxidoreductase TI82_RS01000 PF08543 Phosphomethylpyrimidine kinase TI82_RS01005 PF00563 EAL domain TI82_RS01005 PF00990 Diguanylate cyclase, GGDEF domain TI82_RS01005 PF08447 PAS fold TI82_RS01005 PF08448 PAS fold TI82_RS01010 PF00403 Heavy-metal-associated domain TI82_RS01015 PF09278 MerR, DNA binding TI82_RS01015 PF00376 MerR family regulatory protein TI82_RS01020 PF00528 Binding-protein-dependent transport system inner membrane component TI82_RS01025 PF00005 ABC transporter TI82_RS01030 PF00528 Binding-protein-dependent transport system inner membrane component TI82_RS01035 PF04069 Substrate binding domain of ABC-type glycine betaine transport system TI82_RS01045 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain TI82_RS01045 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TI82_RS01050 PF01266 FAD dependent oxidoreductase TI82_RS01055 PF04267 Sarcosine oxidase, delta subunit family TI82_RS01060 PF17806 Sarcosine oxidase A3 domain TI82_RS01060 PF07992 Pyridine nucleotide-disulphide oxidoreductase TI82_RS01060 PF08669 Glycine cleavage T-protein C-terminal barrel domain TI82_RS01060 PF01571 Aminomethyltransferase folate-binding domain TI82_RS01075 PF01614 Bacterial transcriptional regulator TI82_RS01075 PF09339 IclR helix-turn-helix domain TI82_RS01085 PF00528 Binding-protein-dependent transport system inner membrane component TI82_RS01090 PF00528 Binding-protein-dependent transport system inner membrane component TI82_RS01095 PF00005 ABC transporter TI82_RS01095 PF03459 TOBE domain TI82_RS01095 PF17912 MalK OB fold domain TI82_RS01100 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain TI82_RS01100 PF13378 Enolase C-terminal domain-like TI82_RS01105 PF05336 L-rhamnose mutarotase TI82_RS01125 PF01557 Fumarylacetoacetate (FAA) hydrolase family TI82_RS01130 PF13378 Enolase C-terminal domain-like TI82_RS01130 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain TI82_RS01155 PF03884 DNA gyrase inhibitor YacG TI82_RS01160 PF02545 Maf-like protein TI82_RS01165 PF01176 Translation initiation factor 1A / IF-1 TI82_RS01170 PF01451 Low molecular weight phosphotyrosine protein phosphatase TI82_RS01175 PF06793 Uncharacterised protein family (UPF0262) TI82_RS01180 PF00815 Histidinol dehydrogenase TI82_RS01190 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TI82_RS01210 PF02498 BRO family, N-terminal domain TI82_RS01210 PF10548 P22AR C-terminal domain TI82_RS01215 PF02796 Helix-turn-helix domain of resolvase TI82_RS01215 PF00239 Resolvase, N terminal domain TI82_RS01240 PF01774 UreD urease accessory protein TI82_RS01245 PF00547 Urease, gamma subunit TI82_RS01255 PF00699 Urease beta subunit TI82_RS01260 PF00449 Urease alpha-subunit, N-terminal domain TI82_RS01260 PF01979 Amidohydrolase family TI82_RS01265 PF05194 UreE urease accessory protein, C-terminal domain TI82_RS01265 PF02814 UreE urease accessory protein, N-terminal domain TI82_RS01270 PF01730 UreF TI82_RS01275 PF02492 CobW/HypB/UreG, nucleotide-binding domain TI82_RS01285 PF00512 His Kinase A (phospho-acceptor) domain TI82_RS01285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TI82_RS01290 PF13533 Biotin-lipoyl like TI82_RS01295 PF00873 AcrB/AcrD/AcrF family TI82_RS01300 PF01979 Amidohydrolase family TI82_RS01305 PF01546 Peptidase family M20/M25/M40 TI82_RS01305 PF07687 Peptidase dimerisation domain TI82_RS01310 PF08362 YcdC-like protein, C-terminal region TI82_RS01310 PF00440 Bacterial regulatory proteins, tetR family TI82_RS01315 PF00293 NUDIX domain TI82_RS01320 PF01180 Dihydroorotate dehydrogenase TI82_RS01325 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TI82_RS01325 PF07992 Pyridine nucleotide-disulphide oxidoreductase TI82_RS01335 PF00342 Phosphoglucose isomerase TI82_RS01345 PF13419 Haloacid dehalogenase-like hydrolase TI82_RS01355 PF00501 AMP-binding enzyme TI82_RS01355 PF13193 AMP-binding enzyme C-terminal domain TI82_RS01360 PF00440 Bacterial regulatory proteins, tetR family TI82_RS01360 PF08361 MAATS-type transcriptional repressor, C-terminal region TI82_RS01365 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TI82_RS01370 PF00873 AcrB/AcrD/AcrF family TI82_RS01380 PF00497 Bacterial extracellular solute-binding proteins, family 3 TI82_RS01390 PF03976 Polyphosphate kinase 2 (PPK2) TI82_RS01395 PF00989 PAS fold TI82_RS01395 PF00512 His Kinase A (phospho-acceptor) domain TI82_RS01395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TI82_RS01395 PF16736 Single Cache-like TI82_RS01405 PF00202 Aminotransferase class-III TI82_RS01410 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TI82_RS01410 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TI82_RS01415 PF01430 Hsp33 protein TI82_RS01420 PF04379 ApaG domain TI82_RS01425 PF01053 Cys/Met metabolism PLP-dependent enzyme TI82_RS01435 PF00692 dUTPase TI82_RS01440 PF12833 Helix-turn-helix domain TI82_RS01440 PF01965 DJ-1/PfpI family TI82_RS01455 PF01554 MatE TI82_RS01460 PF01180 Dihydroorotate dehydrogenase TI82_RS01475 PF00561 alpha/beta hydrolase fold TI82_RS01480 PF00072 Response regulator receiver domain TI82_RS01480 PF00196 Bacterial regulatory proteins, luxR family TI82_RS01485 PF00512 His Kinase A (phospho-acceptor) domain TI82_RS01485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TI82_RS01485 PF00072 Response regulator receiver domain TI82_RS01485 PF09456 RcsC Alpha-Beta-Loop (ABL) TI82_RS01490 PF01741 Large-conductance mechanosensitive channel, MscL TI82_RS01495 PF00155 Aminotransferase class I and II TI82_RS01520 PF03466 LysR substrate binding domain TI82_RS01520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TI82_RS01525 PF03788 LrgA family TI82_RS01530 PF04172 LrgB-like family TI82_RS01540 PF02569 Pantoate-beta-alanine ligase TI82_RS01545 PF02548 Ketopantoate hydroxymethyltransferase TI82_RS01550 PF00970 Oxidoreductase FAD-binding domain TI82_RS01550 PF00175 Oxidoreductase NAD-binding domain TI82_RS01555 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain TI82_RS01560 PF03435 Saccharopine dehydrogenase NADP binding domain TI82_RS01560 PF16653 Saccharopine dehydrogenase C-terminal domain TI82_RS01565 PF05544 Proline racemase TI82_RS01570 PF01554 MatE TI82_RS01575 PF06776 Invasion associated locus B (IalB) protein TI82_RS01585 PF00196 Bacterial regulatory proteins, luxR family TI82_RS01585 PF00072 Response regulator receiver domain TI82_RS01595 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component TI82_RS01600 PF03480 Bacterial extracellular solute-binding protein, family 7 TI82_RS01605 PF07883 Cupin domain TI82_RS01605 PF05899 Protein of unknown function (DUF861) TI82_RS01610 PF01014 Uricase TI82_RS01610 PF09349 OHCU decarboxylase TI82_RS01620 PF01799 [2Fe-2S] binding domain TI82_RS01620 PF00111 2Fe-2S iron-sulfur cluster binding domain TI82_RS01625 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TI82_RS01625 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase TI82_RS01635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TI82_RS01635 PF03466 LysR substrate binding domain TI82_RS01645 PF01979 Amidohydrolase family TI82_RS01650 PF05161 MOFRL family TI82_RS01650 PF13660 Domain of unknown function (DUF4147) TI82_RS01655 PF03597 Cytochrome oxidase maturation protein cbb3-type TI82_RS01665 PF05751 FixH TI82_RS01670 PF13746 4Fe-4S dicluster domain TI82_RS01670 PF12801 4Fe-4S binding domain TI82_RS01670 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase TI82_RS01675 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP TI82_RS01675 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TI82_RS01690 PF00115 Cytochrome C and Quinol oxidase polypeptide I TI82_RS01700 PF13462 Thioredoxin TI82_RS01700 PF06965 Na+/H+ antiporter 1 TI82_RS01705 PF00171 Aldehyde dehydrogenase family TI82_RS01710 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain TI82_RS01710 PF12833 Helix-turn-helix domain TI82_RS01710 PF02805 Metal binding domain of Ada TI82_RS01710 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain TI82_RS01715 PF03960 ArsC family TI82_RS01725 PF06779 Uncharacterised MFS-type transporter YbfB TI82_RS01735 PF05992 SbmA/BacA-like family TI82_RS01750 PF01926 50S ribosome-binding GTPase TI82_RS01750 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal TI82_RS01755 PF00012 Hsp70 protein TI82_RS01760 PF07486 Cell Wall Hydrolase TI82_RS01770 PF00119 ATP synthase A chain TI82_RS01775 PF00137 ATP synthase subunit C TI82_RS01780 PF00430 ATP synthase B/B' CF(0) TI82_RS01785 PF00430 ATP synthase B/B' CF(0) TI82_RS01790 PF01351 Ribonuclease HII TI82_RS01795 PF04055 Radical SAM superfamily TI82_RS01815 PF08544 GHMP kinases C terminal TI82_RS01815 PF00288 GHMP kinases N terminal domain TI82_RS01825 PF06965 Na+/H+ antiporter 1 TI82_RS01825 PF01343 Peptidase family S49 TI82_RS01830 PF06965 Na+/H+ antiporter 1 TI82_RS01845 PF00348 Polyprenyl synthetase TI82_RS01855 PF02091 Glycyl-tRNA synthetase alpha subunit TI82_RS01860 PF02092 Glycyl-tRNA synthetase beta subunit TI82_RS01860 PF05746 DALR anticodon binding domain TI82_RS01865 PF02092 Glycyl-tRNA synthetase beta subunit TI82_RS01865 PF05746 DALR anticodon binding domain TI82_RS01870 PF01300 Telomere recombination TI82_RS01870 PF03481 Putative GTP-binding controlling metal-binding TI82_RS01875 PF02913 FAD linked oxidases, C-terminal domain TI82_RS01875 PF01565 FAD binding domain TI82_RS01900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TI82_RS01900 PF02770 Acyl-CoA dehydrogenase, middle domain TI82_RS01900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TI82_RS01900 PF12806 Acetyl-CoA dehydrogenase C-terminal like TI82_RS01905 PF00990 Diguanylate cyclase, GGDEF domain TI82_RS01905 PF17151 Periplasmic sensor domain TI82_RS01910 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain TI82_RS01910 PF02844 Phosphoribosylglycinamide synthetase, N domain TI82_RS01910 PF02843 Phosphoribosylglycinamide synthetase, C domain TI82_RS01915 PF01040 UbiA prenyltransferase family TI82_RS01920 PF01243 Pyridoxamine 5'-phosphate oxidase TI82_RS01920 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region TI82_RS01930 PF01556 DnaJ C terminal domain TI82_RS01930 PF00684 DnaJ central domain TI82_RS01930 PF00226 DnaJ domain TI82_RS01945 PF00313 'Cold-shock' DNA-binding domain TI82_RS01970 PF01264 Chorismate synthase TI82_RS01975 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase TI82_RS01975 PF00925 GTP cyclohydrolase II TI82_RS01980 PF00850 Histone deacetylase domain TI82_RS01985 PF02609 Exonuclease VII small subunit TI82_RS01995 PF04226 Transglycosylase associated protein TI82_RS02005 PF05726 Pirin C-terminal cupin domain TI82_RS02005 PF02678 Pirin TI82_RS02010 PF13292 1-deoxy-D-xylulose-5-phosphate synthase TI82_RS02010 PF02779 Transketolase, pyrimidine binding domain TI82_RS02010 PF02780 Transketolase, C-terminal domain TI82_RS02015 PF01479 S4 domain TI82_RS02015 PF01728 FtsJ-like methyltransferase TI82_RS02020 PF05958 tRNA (Uracil-5-)-methyltransferase TI82_RS02025 PF03641 Possible lysine decarboxylase TI82_RS02030 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme TI82_RS02040 PF00005 ABC transporter TI82_RS02040 PF00664 ABC transporter transmembrane region TI82_RS02045 PF02666 Phosphatidylserine decarboxylase TI82_RS02050 PF01066 CDP-alcohol phosphatidyltransferase TI82_RS02055 PF00106 short chain dehydrogenase TI82_RS02060 PF00156 Phosphoribosyl transferase domain TI82_RS02060 PF13537 Glutamine amidotransferase domain TI82_RS02070 PF18073 Rubredoxin metal binding domain TI82_RS02070 PF06745 KaiC TI82_RS02075 PF03796 DnaB-like helicase C terminal domain TI82_RS02075 PF00772 DnaB-like helicase N terminal domain TI82_RS02085 PF03948 Ribosomal protein L9, C-terminal domain TI82_RS02085 PF01281 Ribosomal protein L9, N-terminal domain TI82_RS02095 PF01084 Ribosomal protein S18 TI82_RS02100 PF01250 Ribosomal protein S6 TI82_RS02105 PF00698 Acyl transferase domain TI82_RS02115 PF00550 Phosphopantetheine attachment site TI82_RS02120 PF00109 Beta-ketoacyl synthase, N-terminal domain TI82_RS02120 PF02801 Beta-ketoacyl synthase, C-terminal domain TI82_RS02125 PF02618 YceG-like family TI82_RS02130 PF03755 YicC-like family, N-terminal region TI82_RS02130 PF08340 Domain of unknown function (DUF1732) TI82_RS02135 PF00625 Guanylate kinase TI82_RS02140 PF01523 Putative modulator of DNA gyrase TI82_RS02150 PF00116 Cytochrome C oxidase subunit II, periplasmic domain TI82_RS02150 PF02790 Cytochrome C oxidase subunit II, transmembrane domain TI82_RS02155 PF00115 Cytochrome C and Quinol oxidase polypeptide I TI82_RS02160 PF01040 UbiA prenyltransferase family TI82_RS02170 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 TI82_RS02175 PF00510 Cytochrome c oxidase subunit III TI82_RS02185 PF02104 SURF1 family TI82_RS02190 PF02401 LytB protein TI82_RS02195 PF01636 Phosphotransferase enzyme family TI82_RS02200 PF00075 RNase H TI82_RS02205 PF08534 Redoxin TI82_RS02205 PF00462 Glutaredoxin TI82_RS02215 PF02622 Uncharacterized ACR, COG1678 TI82_RS02220 PF00563 EAL domain TI82_RS02220 PF03707 Bacterial signalling protein N terminal repeat TI82_RS02220 PF00990 Diguanylate cyclase, GGDEF domain TI82_RS02225 PF13302 Acetyltransferase (GNAT) domain TI82_RS02230 PF05193 Peptidase M16 inactive domain TI82_RS02230 PF00675 Insulinase (Peptidase family M16) TI82_RS02235 PF14821 Threonine synthase N terminus TI82_RS02235 PF00291 Pyridoxal-phosphate dependent enzyme TI82_RS02245 PF12792 CSS motif domain associated with EAL TI82_RS02245 PF00563 EAL domain TI82_RS02255 PF13419 Haloacid dehalogenase-like hydrolase TI82_RS02260 PF00654 Voltage gated chloride channel TI82_RS02265 PF01555 DNA methylase TI82_RS02265 PF18755 Restriction Enzyme Adenine Methylase Associated TI82_RS02275 PF14815 NUDIX domain TI82_RS02275 PF00730 HhH-GPD superfamily base excision DNA repair protein TI82_RS02290 PF02463 RecF/RecN/SMC N terminal domain TI82_RS02295 PF01545 Cation efflux family TI82_RS02305 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain TI82_RS02305 PF00391 PEP-utilising enzyme, mobile domain TI82_RS02305 PF02896 PEP-utilising enzyme, TIM barrel domain TI82_RS02330 PF02632 BioY family TI82_RS02335 PF04115 Ureidoglycolate lyase TI82_RS02340 PF00576 HIUase/Transthyretin family TI82_RS02350 PF02719 Polysaccharide biosynthesis protein TI82_RS02355 PF00953 Glycosyl transferase family 4 TI82_RS02385 PF13276 HTH-like domain TI82_RS02385 PF13683 Integrase core domain TI82_RS02390 PF01370 NAD dependent epimerase/dehydratase family TI82_RS02390 PF02911 Formyl transferase, C-terminal domain TI82_RS02390 PF00551 Formyl transferase TI82_RS02400 PF00005 ABC transporter TI82_RS02400 PF14524 Wzt C-terminal domain TI82_RS02410 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TI82_RS02415 PF16363 GDP-mannose 4,6 dehydratase TI82_RS02420 PF13340 Putative transposase of IS4/5 family (DUF4096) TI82_RS02430 PF13340 Putative transposase of IS4/5 family (DUF4096) TI82_RS02435 PF01609 Transposase DDE domain TI82_RS02450 PF13340 Putative transposase of IS4/5 family (DUF4096) TI82_RS02460 PF13333 Integrase core domain TI82_RS02460 PF00665 Integrase core domain TI82_RS02460 PF13276 HTH-like domain TI82_RS02470 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TI82_RS02470 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TI82_RS02470 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TI82_RS02470 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TI82_RS02475 PF00483 Nucleotidyl transferase TI82_RS02475 PF01050 Mannose-6-phosphate isomerase TI82_RS02485 PF13439 Glycosyltransferase Family 4 TI82_RS02485 PF00534 Glycosyl transferases group 1 TI82_RS02490 PF00005 ABC transporter TI82_RS02495 PF02653 Branched-chain amino acid transport system / permease component TI82_RS02500 PF13407 Periplasmic binding protein domain TI82_RS02510 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TI82_RS02510 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TI82_RS02515 PF01261 Xylose isomerase-like TIM barrel TI82_RS02520 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TI82_RS02520 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TI82_RS02525 PF00356 Bacterial regulatory proteins, lacI family TI82_RS02535 PF00171 Aldehyde dehydrogenase family TI82_RS02540 PF05199 GMC oxidoreductase TI82_RS02540 PF00732 GMC oxidoreductase TI82_RS02545 PF13977 BetI-type transcriptional repressor, C-terminal TI82_RS02545 PF00440 Bacterial regulatory proteins, tetR family TI82_RS02555 PF03449 Transcription elongation factor, N-terminal TI82_RS02555 PF01272 Transcription elongation factor, GreA/GreB, C-term TI82_RS02565 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin TI82_RS02570 PF01544 CorA-like Mg2+ transporter protein TI82_RS02575 PF07729 FCD domain TI82_RS02575 PF00392 Bacterial regulatory proteins, gntR family TI82_RS02580 PF07690 Major Facilitator Superfamily TI82_RS02590 PF05872 Bacterial protein of unknown function (DUF853) TI82_RS02595 PF01476 LysM domain TI82_RS02595 PF03734 L,D-transpeptidase catalytic domain TI82_RS02605 PF13419 Haloacid dehalogenase-like hydrolase TI82_RS02610 PF02777 Iron/manganese superoxide dismutases, C-terminal domain TI82_RS02610 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain TI82_RS02620 PF00326 Prolyl oligopeptidase family TI82_RS02620 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain TI82_RS02625 PF05443 ROS/MUCR transcriptional regulator protein TI82_RS02635 PF08299 Bacterial dnaA protein helix-turn-helix TI82_RS02635 PF00308 Bacterial dnaA protein TI82_RS02635 PF11638 DnaA N-terminal domain TI82_RS02645 PF01425 Amidase TI82_RS02650 PF02657 Fe-S metabolism associated domain TI82_RS02660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TI82_RS02660 PF00512 His Kinase A (phospho-acceptor) domain TI82_RS02690 PF00912 Transglycosylase TI82_RS02690 PF00905 Penicillin binding protein transpeptidase domain TI82_RS02705 PF04860 Phage portal protein TI82_RS02790 PF00072 Response regulator receiver domain TI82_RS02790 PF00486 Transcriptional regulatory protein, C terminal TI82_RS02795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TI82_RS02810 PF03100 CcmE TI82_RS02815 PF01578 Cytochrome C assembly protein TI82_RS02815 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal TI82_RS02820 PF03918 Cytochrome C biogenesis protein TI82_RS02825 PF13180 PDZ domain TI82_RS02830 PF00072 Response regulator receiver domain TI82_RS02830 PF00486 Transcriptional regulatory protein, C terminal TI82_RS02835 PF00512 His Kinase A (phospho-acceptor) domain TI82_RS02835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TI82_RS02835 PF00672 HAMP domain TI82_RS02840 PF08335 GlnD PII-uridylyltransferase TI82_RS02840 PF03710 Glutamate-ammonia ligase adenylyltransferase TI82_RS02850 PF00512 His Kinase A (phospho-acceptor) domain TI82_RS02850 PF00989 PAS fold TI82_RS02850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TI82_RS02855 PF17432 Domain of unknown function (DUF3458_C) ARM repeats TI82_RS02855 PF11940 Domain of unknown function (DUF3458) Ig-like fold TI82_RS02855 PF01433 Peptidase family M1 domain TI82_RS02870 PF03167 Uracil DNA glycosylase superfamily TI82_RS02885 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus TI82_RS02885 PF01048 Phosphorylase superfamily TI82_RS02900 PF00043 Glutathione S-transferase, C-terminal domain TI82_RS02900 PF02798 Glutathione S-transferase, N-terminal domain TI82_RS02935 PF00155 Aminotransferase class I and II TI82_RS02940 PF13495 Phage integrase, N-terminal SAM-like domain TI82_RS02940 PF00589 Phage integrase family TI82_RS02945 PF02530 Porin subfamily TI82_RS02955 PF02530 Porin subfamily TI82_RS02970 PF00829 Ribosomal prokaryotic L21 protein TI82_RS02975 PF14718 Soluble lytic murein transglycosylase L domain TI82_RS02975 PF01464 Transglycosylase SLT domain TI82_RS02980 PF00701 Dihydrodipicolinate synthetase family TI82_RS02985 PF01668 SmpB protein TI82_RS03000 PF01192 RNA polymerase Rpb6 TI82_RS03005 PF13291 ACT domain TI82_RS03005 PF04607 Region found in RelA / SpoT proteins TI82_RS03005 PF02824 TGS domain TI82_RS03010 PF00156 Phosphoribosyl transferase domain TI82_RS03015 PF00027 Cyclic nucleotide-binding domain TI82_RS03015 PF13545 Crp-like helix-turn-helix domain TI82_RS03020 PF04055 Radical SAM superfamily TI82_RS03025 PF07690 Major Facilitator Superfamily TI82_RS03030 PF02311 AraC-like ligand binding domain TI82_RS03030 PF12833 Helix-turn-helix domain TI82_RS03040 PF01648 4'-phosphopantetheinyl transferase superfamily TI82_RS03045 PF10502 Signal peptidase, peptidase S26 TI82_RS03050 PF14622 Ribonuclease-III-like TI82_RS03050 PF00035 Double-stranded RNA binding motif TI82_RS03055 PF07650 KH domain TI82_RS03055 PF01926 50S ribosome-binding GTPase TI82_RS03060 PF11967 Recombination protein O N terminal TI82_RS03060 PF02565 Recombination protein O C terminal TI82_RS03070 PF01966 HD domain TI82_RS03080 PF01979 Amidohydrolase family TI82_RS03100 PF00293 NUDIX domain TI82_RS03110 PF01810 LysE type translocator TI82_RS03120 PF01406 tRNA synthetases class I (C) catalytic domain TI82_RS03125 PF08502 LeuA allosteric (dimerisation) domain TI82_RS03125 PF00682 HMGL-like TI82_RS03130 PF00892 EamA-like transporter family TI82_RS03135 PF01551 Peptidase family M23 TI82_RS03140 PF00398 Ribosomal RNA adenine dimethylase TI82_RS03145 PF04166 Pyridoxal phosphate biosynthetic protein PdxA TI82_RS03150 PF00639 PPIC-type PPIASE domain TI82_RS03150 PF09312 SurA N-terminal domain TI82_RS03155 PF04453 LPS transport system D TI82_RS03155 PF03968 OstA-like protein TI82_RS03170 PF00883 Cytosol aminopeptidase family, catalytic domain TI82_RS03170 PF02789 Cytosol aminopeptidase family, N-terminal domain TI82_RS03185 PF00005 ABC transporter TI82_RS03185 PF12848 ABC transporter TI82_RS03195 PF00334 Nucleoside diphosphate kinase TI82_RS03205 PF02391 MoaE protein TI82_RS03210 PF02597 ThiS family TI82_RS03215 PF01066 CDP-alcohol phosphatidyltransferase TI82_RS03220 PF02151 UvrB/uvrC motif TI82_RS03220 PF08459 UvrC Helix-hairpin-helix N-terminal TI82_RS03220 PF01541 GIY-YIG catalytic domain TI82_RS03220 PF12826 Helix-hairpin-helix motif TI82_RS03230 PF13505 Outer membrane protein beta-barrel domain TI82_RS03240 PF00445 Ribonuclease T2 family TI82_RS03250 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ TI82_RS03260 PF01568 Molydopterin dinucleotide binding domain TI82_RS03260 PF18364 Molybdopterin oxidoreductase N-terminal domain TI82_RS03260 PF00384 Molybdopterin oxidoreductase TI82_RS03270 PF00551 Formyl transferase TI82_RS03275 PF02769 AIR synthase related protein, C-terminal domain TI82_RS03275 PF00586 AIR synthase related protein, N-terminal domain TI82_RS03280 PF01594 AI-2E family transporter TI82_RS03310 PF02652 L-lactate permease TI82_RS03415 PF01053 Cys/Met metabolism PLP-dependent enzyme TI82_RS03430 PF00497 Bacterial extracellular solute-binding proteins, family 3 TI82_RS03435 PF00528 Binding-protein-dependent transport system inner membrane component TI82_RS03440 PF00528 Binding-protein-dependent transport system inner membrane component TI82_RS03445 PF00005 ABC transporter TI82_RS03450 PF01494 FAD binding domain TI82_RS03460 PF13089 Polyphosphate kinase N-terminal domain TI82_RS03460 PF17941 Polyphosphate kinase C-terminal domain 1 TI82_RS03460 PF13090 Polyphosphate kinase C-terminal domain 2 TI82_RS03460 PF02503 Polyphosphate kinase middle domain TI82_RS03470 PF01612 3'-5' exonuclease TI82_RS03470 PF00570 HRDC domain TI82_RS03475 PF00152 tRNA synthetases class II (D, K and N) TI82_RS03475 PF01336 OB-fold nucleic acid binding domain TI82_RS03475 PF02938 GAD domain TI82_RS03485 PF03989 DNA gyrase C-terminal domain, beta-propeller TI82_RS03485 PF00521 DNA gyrase/topoisomerase IV, subunit A TI82_RS03490 PF04377 Arginine-tRNA-protein transferase, C terminus TI82_RS03490 PF04376 Arginine-tRNA-protein transferase, N terminus TI82_RS03500 PF00490 Delta-aminolevulinic acid dehydratase TI82_RS03520 PF03734 L,D-transpeptidase catalytic domain TI82_RS03525 PF00464 Serine hydroxymethyltransferase TI82_RS03530 PF03477 ATP cone domain TI82_RS03535 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TI82_RS03535 PF01872 RibD C-terminal domain TI82_RS03540 PF00677 Lumazine binding domain TI82_RS03545 PF00885 6,7-dimethyl-8-ribityllumazine synthase TI82_RS03550 PF01029 NusB family TI82_RS03555 PF03030 Inorganic H+ pyrophosphatase TI82_RS03560 PF04355 SmpA / OmlA family TI82_RS03575 PF02504 Fatty acid synthesis protein TI82_RS03580 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III TI82_RS03580 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal TI82_RS03585 PF00216 Bacterial DNA-binding protein TI82_RS03590 PF13411 MerR HTH family regulatory protein TI82_RS03595 PF00893 Small Multidrug Resistance protein TI82_RS03605 PF02397 Bacterial sugar transferase TI82_RS03630 PF02628 Cytochrome oxidase assembly protein TI82_RS03635 PF01118 Semialdehyde dehydrogenase, NAD binding domain TI82_RS03640 PF00491 Arginase family TI82_RS03645 PF00380 Ribosomal protein S9/S16 TI82_RS03650 PF00572 Ribosomal protein L13 TI82_RS03660 PF01053 Cys/Met metabolism PLP-dependent enzyme TI82_RS03705 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 TI82_RS03710 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit TI82_RS03715 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit TI82_RS03720 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit TI82_RS03730 PF10531 SLBB domain TI82_RS03730 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TI82_RS03730 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TI82_RS03735 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal TI82_RS03735 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TI82_RS03735 PF00384 Molybdopterin oxidoreductase TI82_RS03740 PF00146 NADH dehydrogenase TI82_RS03745 PF12838 4Fe-4S dicluster domain TI82_RS03750 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 TI82_RS03755 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L TI82_RS03760 PF00361 Proton-conducting membrane transporter TI82_RS03760 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus TI82_RS03765 PF00361 Proton-conducting membrane transporter TI82_RS03765 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus TI82_RS03770 PF00361 Proton-conducting membrane transporter TI82_RS03775 PF03099 Biotin/lipoate A/B protein ligase family TI82_RS03775 PF02237 Biotin protein ligase C terminal domain TI82_RS03780 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain TI82_RS03780 PF12706 Beta-lactamase superfamily domain TI82_RS03780 PF17770 Ribonuclease J C-terminal domain TI82_RS03795 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TI82_RS03795 PF03129 Anticodon binding domain TI82_RS03800 PF02687 FtsX-like permease family TI82_RS03800 PF12704 MacB-like periplasmic core domain TI82_RS03805 PF00005 ABC transporter TI82_RS03810 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TI82_RS03810 PF14579 Helix-hairpin-helix motif TI82_RS03810 PF07733 Bacterial DNA polymerase III alpha NTPase domain TI82_RS03810 PF02811 PHP domain TI82_RS03830 PF01479 S4 domain TI82_RS03830 PF00163 Ribosomal protein S4/S9 N-terminal domain TI82_RS03835 PF01171 PP-loop family TI82_RS03840 PF00459 Inositol monophosphatase family TI82_RS03845 PF07690 Major Facilitator Superfamily TI82_RS03850 PF00462 Glutaredoxin TI82_RS03860 PF00586 AIR synthase related protein, N-terminal domain TI82_RS03860 PF02769 AIR synthase related protein, C-terminal domain TI82_RS03860 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain TI82_RS03870 PF13417 Glutathione S-transferase, N-terminal domain TI82_RS03880 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase TI82_RS03885 PF01259 SAICAR synthetase TI82_RS03895 PF03328 HpcH/HpaI aldolase/citrate lyase family TI82_RS03905 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TI82_RS03910 PF00206 Lyase TI82_RS03910 PF10397 Adenylosuccinate lyase C-terminus TI82_RS03915 PF00834 Ribulose-phosphate 3 epimerase family TI82_RS03925 PF00107 Zinc-binding dehydrogenase TI82_RS03925 PF08240 Alcohol dehydrogenase GroES-like domain TI82_RS03930 PF02801 Beta-ketoacyl synthase, C-terminal domain TI82_RS03930 PF00109 Beta-ketoacyl synthase, N-terminal domain TI82_RS03935 PF02801 Beta-ketoacyl synthase, C-terminal domain TI82_RS03935 PF00109 Beta-ketoacyl synthase, N-terminal domain TI82_RS03940 PF00550 Phosphopantetheine attachment site TI82_RS03955 PF00294 pfkB family carbohydrate kinase TI82_RS03960 PF06299 Protein of unknown function (DUF1045) TI82_RS03965 PF07969 Amidohydrolase family TI82_RS03970 PF13419 Haloacid dehalogenase-like hydrolase TI82_RS03980 PF01207 Dihydrouridine synthase (Dus) TI82_RS03995 PF02654 Cobalamin-5-phosphate synthase TI82_RS04000 PF02277 Phosphoribosyltransferase TI82_RS04005 PF13404 AsnC-type helix-turn-helix domain TI82_RS04005 PF01037 Lrp/AsnC ligand binding domain TI82_RS04010 PF03167 Uracil DNA glycosylase superfamily TI82_RS04020 PF08238 Sel1 repeat TI82_RS04035 PF01521 Iron-sulphur cluster biosynthesis TI82_RS04040 PF01966 HD domain TI82_RS04040 PF13286 Phosphohydrolase-associated domain TI82_RS04045 PF00750 tRNA synthetases class I (R) TI82_RS04045 PF05746 DALR anticodon binding domain TI82_RS04045 PF03485 Arginyl tRNA synthetase N terminal domain TI82_RS04055 PF00933 Glycosyl hydrolase family 3 N terminal domain TI82_RS04060 PF02616 Segregation and condensation protein ScpA TI82_RS04065 PF04079 Segregation and condensation complex subunit ScpB TI82_RS04070 PF02416 mttA/Hcf106 family TI82_RS04075 PF02416 mttA/Hcf106 family TI82_RS04080 PF00902 Sec-independent protein translocase protein (TatC) TI82_RS04085 PF02403 Seryl-tRNA synthetase N-terminal domain TI82_RS04085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TI82_RS04090 PF01975 Survival protein SurE TI82_RS04105 PF01476 LysM domain TI82_RS04105 PF01551 Peptidase family M23 TI82_RS04115 PF02699 Preprotein translocase subunit TI82_RS04120 PF07549 SecD/SecF GG Motif TI82_RS04120 PF02355 Protein export membrane protein TI82_RS04135 PF01134 Glucose inhibited division protein A TI82_RS04160 PF05697 Bacterial trigger factor protein (TF) TI82_RS04160 PF05698 Bacterial trigger factor protein (TF) C-terminus TI82_RS04160 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TI82_RS04165 PF02637 GatB domain TI82_RS04165 PF02934 GatB/GatE catalytic domain TI82_RS04180 PF09923 Uncharacterized protein conserved in bacteria (DUF2155) TI82_RS04185 PF03588 Leucyl/phenylalanyl-tRNA protein transferase TI82_RS04190 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TI82_RS04190 PF02785 Biotin carboxylase C-terminal domain TI82_RS04190 PF00289 Biotin carboxylase, N-terminal domain TI82_RS04195 PF00364 Biotin-requiring enzyme TI82_RS04200 PF01220 Dehydroquinase class II TI82_RS04210 PF01435 Peptidase family M48 TI82_RS04215 PF00155 Aminotransferase class I and II TI82_RS04220 PF00575 S1 RNA binding domain TI82_RS04220 PF12111 Polyribonucleotide phosphorylase C terminal TI82_RS04220 PF10150 Ribonuclease E/G family TI82_RS04230 PF01520 N-acetylmuramoyl-L-alanine amidase TI82_RS04230 PF11741 AMIN domain TI82_RS04235 PF00912 Transglycosylase TI82_RS04235 PF17092 Penicillin-binding protein OB-like domain TI82_RS04235 PF00905 Penicillin binding protein transpeptidase domain TI82_RS04240 PF03462 PCRF domain TI82_RS04240 PF00472 RF-1 domain TI82_RS04245 PF13340 Putative transposase of IS4/5 family (DUF4096) TI82_RS04255 PF04305 Protein of unknown function (DUF455) TI82_RS04260 PF00578 AhpC/TSA family TI82_RS04270 PF00579 tRNA synthetases class I (W and Y) TI82_RS04275 PF03702 Anhydro-N-acetylmuramic acid kinase TI82_RS04280 PF00893 Small Multidrug Resistance protein TI82_RS04285 PF02129 X-Pro dipeptidyl-peptidase (S15 family) TI82_RS04290 PF00266 Aminotransferase class-V TI82_RS04295 PF01458 Uncharacterized protein family (UPF0051) TI82_RS04300 PF00005 ABC transporter TI82_RS04305 PF01458 Uncharacterized protein family (UPF0051) TI82_RS04310 PF00266 Aminotransferase class-V TI82_RS04315 PF01883 Iron-sulfur cluster assembly protein TI82_RS04330 PF01513 ATP-NAD kinase TI82_RS04335 PF00270 DEAD/DEAH box helicase TI82_RS04335 PF00271 Helicase conserved C-terminal domain TI82_RS04340 PF01521 Iron-sulphur cluster biosynthesis TI82_RS04360 PF02321 Outer membrane efflux protein TI82_RS04370 PF08264 Anticodon-binding domain of tRNA TI82_RS04370 PF00133 tRNA synthetases class I (I, L, M and V) TI82_RS04370 PF10458 Valyl tRNA synthetase tRNA binding arm TI82_RS04385 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase TI82_RS04385 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TI82_RS04390 PF13417 Glutathione S-transferase, N-terminal domain TI82_RS04390 PF00043 Glutathione S-transferase, C-terminal domain TI82_RS04395 PF00528 Binding-protein-dependent transport system inner membrane component TI82_RS04400 PF00528 Binding-protein-dependent transport system inner membrane component TI82_RS04405 PF00497 Bacterial extracellular solute-binding proteins, family 3 TI82_RS04415 PF12804 MobA-like NTP transferase domain TI82_RS04420 PF04055 Radical SAM superfamily TI82_RS04420 PF06463 Molybdenum Cofactor Synthesis C TI82_RS04430 PF01494 FAD binding domain TI82_RS04435 PF05681 Fumarate hydratase (Fumerase) TI82_RS04435 PF05683 Fumarase C-terminus TI82_RS04445 PF03734 L,D-transpeptidase catalytic domain TI82_RS04445 PF01471 Putative peptidoglycan binding domain TI82_RS04475 PF00589 Phage integrase family TI82_RS04515 PF13505 Outer membrane protein beta-barrel domain TI82_RS04540 PF13340 Putative transposase of IS4/5 family (DUF4096) TI82_RS04575 PF03960 ArsC family TI82_RS04580 PF03330 Lytic transglycolase TI82_RS04580 PF05036 Sporulation related domain TI82_RS04585 PF00768 D-alanyl-D-alanine carboxypeptidase TI82_RS04585 PF07943 Penicillin-binding protein 5, C-terminal domain TI82_RS04590 PF02223 Thymidylate kinase TI82_RS04595 PF09115 DNA polymerase III, delta subunit, C terminal TI82_RS04600 PF09334 tRNA synthetases class I (M) TI82_RS04600 PF08264 Anticodon-binding domain of tRNA TI82_RS04605 PF01026 TatD related DNase TI82_RS04615 PF00005 ABC transporter TI82_RS04615 PF00664 ABC transporter transmembrane region TI82_RS04620 PF01479 S4 domain TI82_RS04620 PF00849 RNA pseudouridylate synthase TI82_RS04630 PF13419 Haloacid dehalogenase-like hydrolase TI82_RS04640 PF00120 Glutamine synthetase, catalytic domain TI82_RS04640 PF03951 Glutamine synthetase, beta-Grasp domain TI82_RS04645 PF00543 Nitrogen regulatory protein P-II TI82_RS04650 PF01256 Carbohydrate kinase TI82_RS04650 PF03853 YjeF-related protein N-terminus TI82_RS04660 PF13419 Haloacid dehalogenase-like hydrolase TI82_RS04665 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) TI82_RS04675 PF07992 Pyridine nucleotide-disulphide oxidoreductase TI82_RS04675 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TI82_RS04680 PF01474 Class-II DAHP synthetase family TI82_RS04685 PF01219 Prokaryotic diacylglycerol kinase TI82_RS04690 PF02540 NAD synthase TI82_RS04690 PF00795 Carbon-nitrogen hydrolase TI82_RS04695 PF00749 tRNA synthetases class I (E and Q), catalytic domain TI82_RS04705 PF00390 Malic enzyme, N-terminal domain TI82_RS04705 PF01515 Phosphate acetyl/butaryl transferase TI82_RS04705 PF03949 Malic enzyme, NAD binding domain TI82_RS04710 PF13378 Enolase C-terminal domain-like TI82_RS04710 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain TI82_RS04715 PF02405 Permease MlaE TI82_RS04720 PF00005 ABC transporter TI82_RS04740 PF00111 2Fe-2S iron-sulfur cluster binding domain TI82_RS04745 PF07992 Pyridine nucleotide-disulphide oxidoreductase TI82_RS04755 PF00809 Pterin binding enzyme TI82_RS04765 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) TI82_RS04775 PF05128 Domain of unknown function (DUF697) TI82_RS04780 PF04317 YcjX-like family, DUF463 TI82_RS04790 PF01258 Prokaryotic dksA/traR C4-type zinc finger TI82_RS04800 PF13188 PAS domain TI82_RS04800 PF08448 PAS fold TI82_RS04800 PF00512 His Kinase A (phospho-acceptor) domain TI82_RS04800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TI82_RS04800 PF00072 Response regulator receiver domain TI82_RS04820 PF02867 Ribonucleotide reductase, barrel domain TI82_RS04820 PF08471 Class II vitamin B12-dependent ribonucleotide reductase TI82_RS04825 PF00293 NUDIX domain TI82_RS04830 PF00156 Phosphoribosyl transferase domain TI82_RS04840 PF00994 Probable molybdopterin binding domain TI82_RS04840 PF18146 Damage-inducible protein CinA KH domain TI82_RS04840 PF02464 Competence-damaged protein TI82_RS04845 PF03358 NADPH-dependent FMN reductase TI82_RS04855 PF00291 Pyridoxal-phosphate dependent enzyme TI82_RS04855 PF00585 C-terminal regulatory domain of Threonine dehydratase TI82_RS04860 PF00271 Helicase conserved C-terminal domain TI82_RS04860 PF00270 DEAD/DEAH box helicase TI82_RS04865 PF00291 Pyridoxal-phosphate dependent enzyme TI82_RS04870 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TI82_RS04870 PF01411 tRNA synthetases class II (A) TI82_RS04875 PF00581 Rhodanese-like domain TI82_RS04885 PF00990 Diguanylate cyclase, GGDEF domain TI82_RS04890 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain TI82_RS04890 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain TI82_RS04895 PF07690 Major Facilitator Superfamily TI82_RS04900 PF00529 HlyD membrane-fusion protein of T1SS TI82_RS04900 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TI82_RS04905 PF08240 Alcohol dehydrogenase GroES-like domain TI82_RS04910 PF01321 Creatinase/Prolidase N-terminal domain TI82_RS04910 PF00557 Metallopeptidase family M24 TI82_RS04920 PF13593 SBF-like CPA transporter family (DUF4137) TI82_RS04925 PF16363 GDP-mannose 4,6 dehydratase TI82_RS04930 PF03819 MazG nucleotide pyrophosphohydrolase domain TI82_RS04935 PF01613 Flavin reductase like domain TI82_RS04950 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TI82_RS04950 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TI82_RS04950 PF03129 Anticodon binding domain TI82_RS04955 PF00768 D-alanyl-D-alanine carboxypeptidase TI82_RS04960 PF01809 Putative membrane protein insertion efficiency factor TI82_RS04970 PF01227 GTP cyclohydrolase I TI82_RS04975 PF01502 Phosphoribosyl-AMP cyclohydrolase TI82_RS04980 PF01734 Patatin-like phospholipase TI82_RS05015 PF02796 Helix-turn-helix domain of resolvase TI82_RS05015 PF00239 Resolvase, N terminal domain TI82_RS05020 PF02498 BRO family, N-terminal domain TI82_RS05020 PF10548 P22AR C-terminal domain TI82_RS05030 PF02515 CoA-transferase family III TI82_RS05035 PF02770 Acyl-CoA dehydrogenase, middle domain TI82_RS05035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TI82_RS05035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TI82_RS05040 PF03466 LysR substrate binding domain TI82_RS05040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TI82_RS05045 PF00296 Luciferase-like monooxygenase TI82_RS05050 PF00873 AcrB/AcrD/AcrF family TI82_RS05055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TI82_RS05065 PF01702 Queuine tRNA-ribosyltransferase TI82_RS05070 PF02547 Queuosine biosynthesis protein TI82_RS05075 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD TI82_RS05080 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD TI82_RS05085 PF01467 Cytidylyltransferase-like TI82_RS05095 PF00521 DNA gyrase/topoisomerase IV, subunit A TI82_RS05095 PF03989 DNA gyrase C-terminal domain, beta-propeller TI82_RS05100 PF01914 MarC family integral membrane protein TI82_RS05110 PF07702 UTRA domain TI82_RS05110 PF00392 Bacterial regulatory proteins, gntR family TI82_RS05115 PF00436 Single-strand binding protein family TI82_RS05120 PF17755 UvrA DNA-binding domain TI82_RS05120 PF17760 UvrA interaction domain TI82_RS05125 PF00216 Bacterial DNA-binding protein TI82_RS05130 PF00004 ATPase family associated with various cellular activities (AAA) TI82_RS05130 PF05362 Lon protease (S16) C-terminal proteolytic domain TI82_RS05130 PF02190 ATP-dependent protease La (LON) substrate-binding domain TI82_RS05135 PF06689 ClpX C4-type zinc finger TI82_RS05135 PF10431 C-terminal, D2-small domain, of ClpB protein TI82_RS05135 PF07724 AAA domain (Cdc48 subfamily) TI82_RS05140 PF00574 Clp protease TI82_RS05145 PF01926 50S ribosome-binding GTPase TI82_RS05145 PF13167 GTP-binding GTPase N-terminal TI82_RS05145 PF16360 GTP-binding GTPase Middle Region TI82_RS05150 PF17209 Hfq protein TI82_RS05160 PF02254 TrkA-N domain TI82_RS05160 PF02080 TrkA-C domain TI82_RS05165 PF00158 Sigma-54 interaction domain TI82_RS05165 PF02954 Bacterial regulatory protein, Fis family TI82_RS05165 PF00072 Response regulator receiver domain TI82_RS05170 PF00989 PAS fold TI82_RS05170 PF00512 His Kinase A (phospho-acceptor) domain TI82_RS05170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TI82_RS05170 PF00672 HAMP domain TI82_RS05175 PF02954 Bacterial regulatory protein, Fis family TI82_RS05175 PF00158 Sigma-54 interaction domain TI82_RS05175 PF00072 Response regulator receiver domain TI82_RS05180 PF00989 PAS fold TI82_RS05180 PF00512 His Kinase A (phospho-acceptor) domain TI82_RS05180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TI82_RS05185 PF01207 Dihydrouridine synthase (Dus) TI82_RS05190 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TI82_RS05190 PF02542 YgbB family TI82_RS05195 PF00994 Probable molybdopterin binding domain TI82_RS05195 PF02464 Competence-damaged protein TI82_RS05195 PF18146 Damage-inducible protein CinA KH domain TI82_RS05205 PF03364 Polyketide cyclase / dehydrase and lipid transport TI82_RS05210 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family TI82_RS05210 PF04055 Radical SAM superfamily TI82_RS05220 PF07992 Pyridine nucleotide-disulphide oxidoreductase TI82_RS05220 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TI82_RS05225 PF00364 Biotin-requiring enzyme TI82_RS05225 PF02817 e3 binding domain TI82_RS05225 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) TI82_RS05230 PF02780 Transketolase, C-terminal domain TI82_RS05230 PF02779 Transketolase, pyrimidine binding domain TI82_RS05230 PF00364 Biotin-requiring enzyme TI82_RS05235 PF00676 Dehydrogenase E1 component TI82_RS05240 PF04977 Septum formation initiator TI82_RS05250 PF03952 Enolase, N-terminal domain TI82_RS05250 PF00113 Enolase, C-terminal TIM barrel domain TI82_RS05255 PF00793 DAHP synthetase I family TI82_RS05260 PF06418 CTP synthase N-terminus TI82_RS05260 PF00117 Glutamine amidotransferase class-I TI82_RS05270 PF03840 Preprotein translocase SecG subunit TI82_RS05275 PF00121 Triosephosphate isomerase TI82_RS05280 PF13145 PPIC-type PPIASE domain TI82_RS05285 PF00591 Glycosyl transferase family, a/b domain TI82_RS05285 PF02885 Glycosyl transferase family, helical bundle domain TI82_RS05290 PF00218 Indole-3-glycerol phosphate synthase TI82_RS05295 PF01967 MoaC family TI82_RS05300 PF03453 MoeA N-terminal region (domain I and II) TI82_RS05300 PF03454 MoeA C-terminal region (domain IV) TI82_RS05300 PF00994 Probable molybdopterin binding domain TI82_RS05305 PF00717 Peptidase S24-like TI82_RS05305 PF01726 LexA DNA binding domain TI82_RS05310 PF03772 Competence protein TI82_RS05310 PF00753 Metallo-beta-lactamase superfamily TI82_RS05315 PF00749 tRNA synthetases class I (E and Q), catalytic domain TI82_RS05320 PF00285 Citrate synthase, C-terminal domain TI82_RS05325 PF02684 Lipid-A-disaccharide synthetase TI82_RS05335 PF00132 Bacterial transferase hexapeptide (six repeats) TI82_RS05335 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 TI82_RS05340 PF07977 FabA-like domain TI82_RS05345 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD TI82_RS05345 PF00132 Bacterial transferase hexapeptide (six repeats) TI82_RS05350 PF01103 Surface antigen TI82_RS05350 PF07244 Surface antigen variable number repeat TI82_RS05355 PF02163 Peptidase family M50 TI82_RS05355 PF17820 PDZ domain TI82_RS05365 PF01255 Putative undecaprenyl diphosphate synthase TI82_RS05370 PF01765 Ribosome recycling factor TI82_RS05375 PF00696 Amino acid kinase family TI82_RS05380 PF00889 Elongation factor TS TI82_RS05385 PF00318 Ribosomal protein S2 TI82_RS05405 PF03009 Glycerophosphoryl diester phosphodiesterase family TI82_RS05415 PF01230 HIT domain TI82_RS05420 PF10431 C-terminal, D2-small domain, of ClpB protein TI82_RS05420 PF02861 Clp amino terminal domain, pathogenicity island component TI82_RS05420 PF07724 AAA domain (Cdc48 subfamily) TI82_RS05420 PF17871 AAA lid domain TI82_RS05420 PF00004 ATPase family associated with various cellular activities (AAA) TI82_RS05425 PF02617 ATP-dependent Clp protease adaptor protein ClpS TI82_RS05430 PF00768 D-alanyl-D-alanine carboxypeptidase TI82_RS05430 PF07943 Penicillin-binding protein 5, C-terminal domain TI82_RS05445 PF03313 Serine dehydratase alpha chain TI82_RS05445 PF03315 Serine dehydratase beta chain TI82_RS05460 PF09278 MerR, DNA binding TI82_RS05460 PF00376 MerR family regulatory protein TI82_RS05480 PF14489 QueF-like protein TI82_RS05495 PF01381 Helix-turn-helix TI82_RS05495 PF06114 IrrE N-terminal-like domain TI82_RS05495 PF09856 Predicted transcriptional regulator (DUF2083) TI82_RS05505 PF02785 Biotin carboxylase C-terminal domain TI82_RS05505 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TI82_RS05505 PF00364 Biotin-requiring enzyme TI82_RS05505 PF18140 Propionyl-coenzyme A carboxylase BT domain TI82_RS05505 PF00289 Biotin carboxylase, N-terminal domain TI82_RS05510 PF02310 B12 binding domain TI82_RS05510 PF01642 Methylmalonyl-CoA mutase TI82_RS05525 PF16868 NMT1-like family TI82_RS05530 PF01177 Asp/Glu/Hydantoin racemase TI82_RS05535 PF00588 SpoU rRNA Methylase family TI82_RS05540 PF01965 DJ-1/PfpI family TI82_RS05550 PF00180 Isocitrate/isopropylmalate dehydrogenase TI82_RS05555 PF00245 Alkaline phosphatase TI82_RS05560 PF02272 DHHA1 domain TI82_RS05560 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TI82_RS05560 PF01411 tRNA synthetases class II (A) TI82_RS05565 PF00154 recA bacterial DNA recombination protein TI82_RS05570 PF00691 OmpA family TI82_RS05570 PF13488 Glycine zipper TI82_RS05580 PF00004 ATPase family associated with various cellular activities (AAA) TI82_RS05580 PF16193 AAA C-terminal domain TI82_RS05580 PF12002 MgsA AAA+ ATPase C terminal TI82_RS05585 PF17820 PDZ domain TI82_RS05585 PF13180 PDZ domain TI82_RS05590 PF01196 Ribosomal protein L17 TI82_RS05595 PF01000 RNA polymerase Rpb3/RpoA insert domain TI82_RS05595 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain TI82_RS05595 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain TI82_RS05600 PF00411 Ribosomal protein S11 TI82_RS05605 PF00416 Ribosomal protein S13/S18 TI82_RS05615 PF00344 SecY translocase TI82_RS05620 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A TI82_RS05625 PF00327 Ribosomal protein L30p/L7e TI82_RS05630 PF00333 Ribosomal protein S5, N-terminal domain TI82_RS05630 PF03719 Ribosomal protein S5, C-terminal domain TI82_RS05635 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast TI82_RS05640 PF00347 Ribosomal protein L6 TI82_RS05645 PF00410 Ribosomal protein S8 TI82_RS05650 PF00253 Ribosomal protein S14p/S29e TI82_RS05655 PF00281 Ribosomal protein L5 TI82_RS05655 PF00673 ribosomal L5P family C-terminus TI82_RS05660 PF00467 KOW motif TI82_RS05660 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 TI82_RS05665 PF00238 Ribosomal protein L14p/L23e TI82_RS05670 PF00366 Ribosomal protein S17 TI82_RS05675 PF00831 Ribosomal L29 protein TI82_RS05680 PF00252 Ribosomal protein L16p/L10e TI82_RS05685 PF00189 Ribosomal protein S3, C-terminal domain TI82_RS05685 PF07650 KH domain TI82_RS05690 PF00237 Ribosomal protein L22p/L17e TI82_RS05695 PF00203 Ribosomal protein S19 TI82_RS05700 PF00181 Ribosomal Proteins L2, RNA binding domain TI82_RS05700 PF03947 Ribosomal Proteins L2, C-terminal domain TI82_RS05705 PF00276 Ribosomal protein L23 TI82_RS05710 PF00573 Ribosomal protein L4/L1 family TI82_RS05715 PF00297 Ribosomal protein L3 TI82_RS05720 PF00338 Ribosomal protein S10p/S20e TI82_RS05725 PF00009 Elongation factor Tu GTP binding domain TI82_RS05725 PF03144 Elongation factor Tu domain 2 TI82_RS05725 PF03143 Elongation factor Tu C-terminal domain TI82_RS05730 PF00009 Elongation factor Tu GTP binding domain TI82_RS05730 PF03764 Elongation factor G, domain IV TI82_RS05730 PF14492 Elongation Factor G, domain II TI82_RS05730 PF00679 Elongation factor G C-terminus TI82_RS05730 PF03144 Elongation factor Tu domain 2 TI82_RS05735 PF00177 Ribosomal protein S7p/S5e TI82_RS05740 PF00164 Ribosomal protein S12/S23 TI82_RS05750 PF05000 RNA polymerase Rpb1, domain 4 TI82_RS05750 PF04998 RNA polymerase Rpb1, domain 5 TI82_RS05750 PF04997 RNA polymerase Rpb1, domain 1 TI82_RS05750 PF04983 RNA polymerase Rpb1, domain 3 TI82_RS05750 PF00623 RNA polymerase Rpb1, domain 2 TI82_RS05755 PF04561 RNA polymerase Rpb2, domain 2 TI82_RS05755 PF04565 RNA polymerase Rpb2, domain 3 TI82_RS05755 PF10385 RNA polymerase beta subunit external 1 domain TI82_RS05755 PF04563 RNA polymerase beta subunit TI82_RS05755 PF00562 RNA polymerase Rpb2, domain 6 TI82_RS05755 PF04560 RNA polymerase Rpb2, domain 7 TI82_RS05760 PF16320 Ribosomal protein L7/L12 dimerisation domain TI82_RS05760 PF00542 Ribosomal protein L7/L12 C-terminal domain TI82_RS05765 PF00466 Ribosomal protein L10 TI82_RS05770 PF00687 Ribosomal protein L1p/L10e family TI82_RS05775 PF00298 Ribosomal protein L11, RNA binding domain TI82_RS05775 PF03946 Ribosomal protein L11, N-terminal domain TI82_RS05780 PF00467 KOW motif TI82_RS05780 PF02357 Transcription termination factor nusG TI82_RS05785 PF00584 SecE/Sec61-gamma subunits of protein translocation complex TI82_RS05795 PF00009 Elongation factor Tu GTP binding domain TI82_RS05795 PF03144 Elongation factor Tu domain 2 TI82_RS05795 PF03143 Elongation factor Tu C-terminal domain TI82_RS05810 PF08032 RNA 2'-O ribose methyltransferase substrate binding TI82_RS05810 PF00588 SpoU rRNA Methylase family TI82_RS05835 PF00132 Bacterial transferase hexapeptide (six repeats) TI82_RS05845 PF00132 Bacterial transferase hexapeptide (six repeats) TI82_RS05845 PF06426 Serine acetyltransferase, N-terminal TI82_RS05850 PF00561 alpha/beta hydrolase fold TI82_RS05860 PF00313 'Cold-shock' DNA-binding domain TI82_RS05865 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TI82_RS05875 PF17768 RecJ OB domain TI82_RS05875 PF02272 DHHA1 domain TI82_RS05875 PF01368 DHH family TI82_RS05880 PF07478 D-ala D-ala ligase C-terminus TI82_RS05880 PF01820 D-ala D-ala ligase N-terminus TI82_RS05885 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded TI82_RS05890 PF03447 Homoserine dehydrogenase, NAD binding domain TI82_RS05890 PF01842 ACT domain TI82_RS05890 PF00742 Homoserine dehydrogenase TI82_RS05895 PF00155 Aminotransferase class I and II TI82_RS05925 PF17746 SfsA N-terminal OB domain TI82_RS05925 PF03749 Sugar fermentation stimulation protein RE domain TI82_RS05930 PF00557 Metallopeptidase family M24 TI82_RS05935 PF04002 RadC-like JAB domain TI82_RS05945 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TI82_RS05955 PF02570 Precorrin-8X methylmutase TI82_RS05960 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TI82_RS05965 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TI82_RS05980 PF01613 Flavin reductase like domain TI82_RS05990 PF03186 CobD/Cbib protein TI82_RS05995 PF00155 Aminotransferase class I and II TI82_RS06000 PF07685 CobB/CobQ-like glutamine amidotransferase domain TI82_RS06000 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TI82_RS06005 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TI82_RS06010 PF01888 CbiD TI82_RS06015 PF02571 Precorrin-6x reductase CbiJ/CobK TI82_RS06020 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TI82_RS06035 PF01925 Sulfite exporter TauE/SafE TI82_RS06040 PF00892 EamA-like transporter family TI82_RS06045 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP TI82_RS06050 PF02514 CobN/Magnesium Chelatase TI82_RS06055 PF07683 Cobalamin synthesis protein cobW C-terminal domain TI82_RS06055 PF02492 CobW/HypB/UreG, nucleotide-binding domain TI82_RS06060 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase TI82_RS06075 PF07685 CobB/CobQ-like glutamine amidotransferase domain TI82_RS06075 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TI82_RS06080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TI82_RS06080 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TI82_RS06080 PF02770 Acyl-CoA dehydrogenase, middle domain TI82_RS06085 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase TI82_RS06085 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TI82_RS06100 PF01965 DJ-1/PfpI family TI82_RS06100 PF12833 Helix-turn-helix domain TI82_RS06110 PF01571 Aminomethyltransferase folate-binding domain TI82_RS06110 PF16350 FAD dependent oxidoreductase central domain TI82_RS06110 PF08669 Glycine cleavage T-protein C-terminal barrel domain TI82_RS06110 PF01266 FAD dependent oxidoreductase TI82_RS06130 PF07549 SecD/SecF GG Motif TI82_RS06130 PF02355 Protein export membrane protein TI82_RS06135 PF02254 TrkA-N domain TI82_RS06135 PF00999 Sodium/hydrogen exchanger family TI82_RS06150 PF00528 Binding-protein-dependent transport system inner membrane component TI82_RS06155 PF00528 Binding-protein-dependent transport system inner membrane component TI82_RS06170 PF03741 Integral membrane protein TerC family TI82_RS06170 PF03471 Transporter associated domain TI82_RS06175 PF09335 SNARE associated Golgi protein TI82_RS06190 PF05025 RbsD / FucU transport protein family TI82_RS06200 PF00005 ABC transporter TI82_RS06205 PF02653 Branched-chain amino acid transport system / permease component TI82_RS06215 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TI82_RS06215 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TI82_RS06220 PF00005 ABC transporter TI82_RS06225 PF01032 FecCD transport family TI82_RS06235 PF07715 TonB-dependent Receptor Plug Domain TI82_RS06235 PF00593 TonB dependent receptor TI82_RS06245 PF00005 ABC transporter TI82_RS06250 PF13533 Biotin-lipoyl like TI82_RS06255 PF02638 Glycosyl hydrolase-like 10 TI82_RS06260 PF00547 Urease, gamma subunit TI82_RS06265 PF00699 Urease beta subunit TI82_RS06270 PF01979 Amidohydrolase family TI82_RS06270 PF00449 Urease alpha-subunit, N-terminal domain TI82_RS06275 PF02814 UreE urease accessory protein, N-terminal domain TI82_RS06275 PF05194 UreE urease accessory protein, C-terminal domain TI82_RS06280 PF01730 UreF TI82_RS06285 PF02492 CobW/HypB/UreG, nucleotide-binding domain TI82_RS06290 PF01774 UreD urease accessory protein TI82_RS06295 PF03253 Urea transporter TI82_RS06305 PF13190 PDGLE domain TI82_RS06305 PF01891 Cobalt uptake substrate-specific transmembrane region TI82_RS06320 PF00005 ABC transporter TI82_RS06325 PF03625 Domain of unknown function DUF302 TI82_RS06325 PF02537 CrcB-like protein, Camphor Resistance (CrcB) TI82_RS06330 PF02537 CrcB-like protein, Camphor Resistance (CrcB) TI82_RS06345 PF02567 Phenazine biosynthesis-like protein TI82_RS06360 PF07886 BA14K-like protein TI82_RS06365 PF00155 Aminotransferase class I and II TI82_RS06375 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain TI82_RS06375 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain TI82_RS06380 PF00440 Bacterial regulatory proteins, tetR family TI82_RS06385 PF02705 K+ potassium transporter TI82_RS06390 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ TI82_RS06400 PF13538 UvrD-like helicase C-terminal domain TI82_RS06400 PF14490 Helix-hairpin-helix containing domain TI82_RS06400 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain TI82_RS06405 PF10369 Small subunit of acetolactate synthase TI82_RS06410 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TI82_RS06410 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TI82_RS06410 PF00205 Thiamine pyrophosphate enzyme, central domain TI82_RS06430 PF13180 PDZ domain TI82_RS06440 PF01145 SPFH domain / Band 7 family TI82_RS06445 PF01145 SPFH domain / Band 7 family TI82_RS06450 PF00186 Dihydrofolate reductase TI82_RS06455 PF00303 Thymidylate synthase TI82_RS06465 PF07690 Major Facilitator Superfamily TI82_RS06505 PF01565 FAD binding domain TI82_RS06505 PF02913 FAD linked oxidases, C-terminal domain TI82_RS06510 PF03928 Haem-degrading TI82_RS06520 PF13361 UvrD-like helicase C-terminal domain TI82_RS06520 PF00580 UvrD/REP helicase N-terminal domain TI82_RS06530 PF00132 Bacterial transferase hexapeptide (six repeats) TI82_RS06535 PF02630 SCO1/SenC TI82_RS06545 PF01321 Creatinase/Prolidase N-terminal domain TI82_RS06545 PF00557 Metallopeptidase family M24 TI82_RS06555 PF03119 NAD-dependent DNA ligase C4 zinc finger domain TI82_RS06555 PF00533 BRCA1 C Terminus (BRCT) domain TI82_RS06555 PF12826 Helix-hairpin-helix motif TI82_RS06555 PF01653 NAD-dependent DNA ligase adenylation domain TI82_RS06555 PF03120 NAD-dependent DNA ligase OB-fold domain TI82_RS06560 PF02463 RecF/RecN/SMC N terminal domain TI82_RS06565 PF13525 Outer membrane lipoprotein TI82_RS06570 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase TI82_RS06575 PF00091 Tubulin/FtsZ family, GTPase domain TI82_RS06575 PF12327 FtsZ family, C-terminal domain TI82_RS06580 PF02491 SHS2 domain inserted in FTSA TI82_RS06585 PF08478 POTRA domain, FtsQ-type TI82_RS06585 PF03799 Cell division protein FtsQ TI82_RS06590 PF07478 D-ala D-ala ligase C-terminus TI82_RS06590 PF01820 D-ala D-ala ligase N-terminus TI82_RS06595 PF01565 FAD binding domain TI82_RS06595 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain TI82_RS06600 PF01225 Mur ligase family, catalytic domain TI82_RS06600 PF08245 Mur ligase middle domain TI82_RS06600 PF02875 Mur ligase family, glutamate ligase domain TI82_RS06605 PF03033 Glycosyltransferase family 28 N-terminal domain TI82_RS06605 PF04101 Glycosyltransferase family 28 C-terminal domain TI82_RS06610 PF01098 Cell cycle protein TI82_RS06615 PF02875 Mur ligase family, glutamate ligase domain TI82_RS06615 PF08245 Mur ligase middle domain TI82_RS06620 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 TI82_RS06620 PF00953 Glycosyl transferase family 4 TI82_RS06625 PF01225 Mur ligase family, catalytic domain TI82_RS06625 PF08245 Mur ligase middle domain TI82_RS06625 PF02875 Mur ligase family, glutamate ligase domain TI82_RS06630 PF01225 Mur ligase family, catalytic domain TI82_RS06630 PF08245 Mur ligase middle domain TI82_RS06630 PF02875 Mur ligase family, glutamate ligase domain TI82_RS06635 PF03717 Penicillin-binding Protein dimerisation domain TI82_RS06635 PF00905 Penicillin binding protein transpeptidase domain TI82_RS06645 PF01795 MraW methylase family TI82_RS06650 PF01566 Natural resistance-associated macrophage protein TI82_RS06660 PF01510 N-acetylmuramoyl-L-alanine amidase TI82_RS06665 PF05099 Tellurite resistance protein TerB TI82_RS06665 PF00226 DnaJ domain TI82_RS06675 PF01183 Glycosyl hydrolases family 25 TI82_RS06690 PF02219 Methylenetetrahydrofolate reductase TI82_RS06695 PF01022 Bacterial regulatory protein, arsR family TI82_RS06705 PF00083 Sugar (and other) transporter TI82_RS06710 PF13847 Methyltransferase domain TI82_RS06715 PF00005 ABC transporter TI82_RS06715 PF12848 ABC transporter TI82_RS06725 PF12146 Serine aminopeptidase, S33 TI82_RS06745 PF00355 Rieske [2Fe-2S] domain TI82_RS06745 PF00848 Ring hydroxylating alpha subunit (catalytic domain) TI82_RS06750 PF00970 Oxidoreductase FAD-binding domain TI82_RS06750 PF00175 Oxidoreductase NAD-binding domain TI82_RS06750 PF00111 2Fe-2S iron-sulfur cluster binding domain TI82_RS06755 PF03831 PhnA domain TI82_RS06755 PF08274 PhnA Zinc-Ribbon TI82_RS06760 PF00857 Isochorismatase family TI82_RS06775 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family TI82_RS06815 PF04402 Protein of unknown function (DUF541) TI82_RS06825 PF03692 Putative zinc- or iron-chelating domain TI82_RS06835 PF03979 Sigma-70 factor, region 1.1 TI82_RS06835 PF04546 Sigma-70, non-essential region TI82_RS06835 PF04542 Sigma-70 region 2 TI82_RS06835 PF00140 Sigma-70 factor, region 1.2 TI82_RS06835 PF04545 Sigma-70, region 4 TI82_RS06835 PF04539 Sigma-70 region 3 TI82_RS06840 PF01807 CHC2 zinc finger TI82_RS06840 PF08275 DNA primase catalytic core, N-terminal domain TI82_RS06840 PF08278 DNA primase DnaG DnaB-binding TI82_RS06840 PF10410 DnaB-helicase binding domain of primase TI82_RS06845 PF02690 Na+/Pi-cotransporter TI82_RS06855 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain TI82_RS06855 PF00117 Glutamine amidotransferase class-I TI82_RS06860 PF04228 Putative neutral zinc metallopeptidase TI82_RS06875 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TI82_RS06875 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TI82_RS06875 PF02142 MGS-like domain TI82_RS06880 PF00005 ABC transporter TI82_RS06890 PF00313 'Cold-shock' DNA-binding domain TI82_RS06895 PF02798 Glutathione S-transferase, N-terminal domain TI82_RS06900 PF00155 Aminotransferase class I and II TI82_RS06910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TI82_RS06910 PF03466 LysR substrate binding domain TI82_RS06915 PF07992 Pyridine nucleotide-disulphide oxidoreductase TI82_RS06920 PF02386 Cation transport protein TI82_RS06925 PF01037 Lrp/AsnC ligand binding domain TI82_RS06930 PF00534 Glycosyl transferases group 1 TI82_RS06935 PF03449 Transcription elongation factor, N-terminal TI82_RS06935 PF01272 Transcription elongation factor, GreA/GreB, C-term TI82_RS06960 PF03061 Thioesterase superfamily TI82_RS06970 PF00271 Helicase conserved C-terminal domain TI82_RS06970 PF12344 Ultra-violet resistance protein B TI82_RS06970 PF17757 UvrB interaction domain TI82_RS06970 PF02151 UvrB/uvrC motif TI82_RS06970 PF04851 Type III restriction enzyme, res subunit TI82_RS06975 PF01464 Transglycosylase SLT domain TI82_RS06975 PF01551 Peptidase family M23 TI82_RS06975 PF10145 Phage-related minor tail protein TI82_RS06980 PF00313 'Cold-shock' DNA-binding domain TI82_RS06990 PF00753 Metallo-beta-lactamase superfamily TI82_RS07005 PF12802 MarR family TI82_RS07010 PF00486 Transcriptional regulatory protein, C terminal TI82_RS07010 PF00072 Response regulator receiver domain TI82_RS07015 PF00512 His Kinase A (phospho-acceptor) domain TI82_RS07015 PF16527 Two-component sensor protein CpxA, periplasmic domain TI82_RS07015 PF00672 HAMP domain TI82_RS07015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TI82_RS07025 PF01588 Putative tRNA binding domain TI82_RS07040 PF01790 Prolipoprotein diacylglyceryl transferase TI82_RS07050 PF02578 Multi-copper polyphenol oxidoreductase laccase TI82_RS07070 PF14572 Phosphoribosyl synthetase-associated domain TI82_RS07070 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase TI82_RS07080 PF01386 Ribosomal L25p family TI82_RS07080 PF14693 Ribosomal protein TL5, C-terminal domain TI82_RS07085 PF01195 Peptidyl-tRNA hydrolase TI82_RS07090 PF06071 Protein of unknown function (DUF933) TI82_RS07090 PF01926 50S ribosome-binding GTPase TI82_RS07095 PF01575 MaoC like domain TI82_RS07105 PF00156 Phosphoribosyl transferase domain TI82_RS07110 PF00032 Cytochrome b(C-terminal)/b6/petD TI82_RS07110 PF00033 Cytochrome b/b6/petB TI82_RS07110 PF02167 Cytochrome C1 family TI82_RS07115 PF00032 Cytochrome b(C-terminal)/b6/petD TI82_RS07115 PF00033 Cytochrome b/b6/petB TI82_RS07120 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal TI82_RS07120 PF00355 Rieske [2Fe-2S] domain TI82_RS07125 PF00664 ABC transporter transmembrane region TI82_RS07125 PF00005 ABC transporter TI82_RS07135 PF00588 SpoU rRNA Methylase family TI82_RS07150 PF01218 Coproporphyrinogen III oxidase TI82_RS07155 PF13508 Acetyltransferase (GNAT) domain TI82_RS07170 PF12627 Probable RNA and SrmB- binding site of polymerase A TI82_RS07170 PF01743 Poly A polymerase head domain TI82_RS07170 PF13735 tRNA nucleotidyltransferase domain 2 putative TI82_RS07175 PF00293 NUDIX domain TI82_RS07185 PF17863 AAA lid domain TI82_RS07185 PF07726 ATPase family associated with various cellular activities (AAA) TI82_RS07210 PF13409 Glutathione S-transferase, N-terminal domain TI82_RS07215 PF03922 OmpW family TI82_RS07220 PF00293 NUDIX domain TI82_RS07230 PF08502 LeuA allosteric (dimerisation) domain TI82_RS07230 PF00682 HMGL-like TI82_RS07235 PF01545 Cation efflux family TI82_RS07235 PF16916 Dimerisation domain of Zinc Transporter TI82_RS07240 PF00425 chorismate binding enzyme TI82_RS07240 PF04715 Anthranilate synthase component I, N terminal region TI82_RS07240 PF00117 Glutamine amidotransferase class-I TI82_RS07250 PF01037 Lrp/AsnC ligand binding domain TI82_RS07275 PF04069 Substrate binding domain of ABC-type glycine betaine transport system TI82_RS07280 PF00528 Binding-protein-dependent transport system inner membrane component TI82_RS07285 PF00005 ABC transporter TI82_RS07285 PF00571 CBS domain TI82_RS07290 PF00005 ABC transporter TI82_RS07290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TI82_RS07295 PF00005 ABC transporter TI82_RS07295 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TI82_RS07300 PF12911 N-terminal TM domain of oligopeptide transport permease C TI82_RS07300 PF00528 Binding-protein-dependent transport system inner membrane component TI82_RS07305 PF00528 Binding-protein-dependent transport system inner membrane component TI82_RS07310 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TI82_RS07315 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TI82_RS07320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TI82_RS07330 PF01022 Bacterial regulatory protein, arsR family TI82_RS07335 PF00588 SpoU rRNA Methylase family TI82_RS07370 PF10090 Histidine phosphotransferase C-terminal domain TI82_RS07375 PF00486 Transcriptional regulatory protein, C terminal TI82_RS07375 PF00072 Response regulator receiver domain TI82_RS07385 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TI82_RS07390 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TI82_RS07390 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TI82_RS07415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TI82_RS07415 PF00989 PAS fold TI82_RS07415 PF13188 PAS domain TI82_RS07415 PF00512 His Kinase A (phospho-acceptor) domain TI82_RS07425 PF00528 Binding-protein-dependent transport system inner membrane component TI82_RS07430 PF00528 Binding-protein-dependent transport system inner membrane component TI82_RS07435 PF08402 TOBE domain TI82_RS07435 PF00005 ABC transporter TI82_RS07440 PF13416 Bacterial extracellular solute-binding protein TI82_RS07445 PF09856 Predicted transcriptional regulator (DUF2083) TI82_RS07445 PF06114 IrrE N-terminal-like domain TI82_RS07445 PF01381 Helix-turn-helix TI82_RS07450 PF00463 Isocitrate lyase family TI82_RS07485 PF13505 Outer membrane protein beta-barrel domain TI82_RS07500 PF02734 DAK2 domain TI82_RS07505 PF02733 Dak1 domain TI82_RS07510 PF02734 DAK2 domain TI82_RS07515 PF02733 Dak1 domain TI82_RS07525 PF13407 Periplasmic binding protein domain TI82_RS07530 PF02653 Branched-chain amino acid transport system / permease component TI82_RS07535 PF00005 ABC transporter TI82_RS07545 PF00732 GMC oxidoreductase TI82_RS07545 PF05199 GMC oxidoreductase TI82_RS07550 PF05199 GMC oxidoreductase TI82_RS07550 PF00732 GMC oxidoreductase TI82_RS07595 PF00171 Aldehyde dehydrogenase family TI82_RS07620 PF00749 tRNA synthetases class I (E and Q), catalytic domain TI82_RS07625 PF01274 Malate synthase TI82_RS07635 PF00140 Sigma-70 factor, region 1.2 TI82_RS07635 PF04542 Sigma-70 region 2 TI82_RS07635 PF04545 Sigma-70, region 4 TI82_RS07640 PF00849 RNA pseudouridylate synthase TI82_RS07655 PF01475 Ferric uptake regulator family TI82_RS07660 PF13426 PAS domain TI82_RS07660 PF08447 PAS fold TI82_RS07660 PF07536 HWE histidine kinase TI82_RS07670 PF00072 Response regulator receiver domain TI82_RS07680 PF04542 Sigma-70 region 2 TI82_RS07680 PF08281 Sigma-70, region 4 TI82_RS07685 PF13581 Histidine kinase-like ATPase domain TI82_RS07685 PF13426 PAS domain TI82_RS07685 PF07568 Histidine kinase TI82_RS07710 PF01618 MotA/TolQ/ExbB proton channel family TI82_RS07715 PF02472 Biopolymer transport protein ExbD/TolR TI82_RS07730 PF12704 MacB-like periplasmic core domain TI82_RS07730 PF00005 ABC transporter TI82_RS07730 PF02687 FtsX-like permease family TI82_RS07735 PF12704 MacB-like periplasmic core domain TI82_RS07735 PF00005 ABC transporter TI82_RS07735 PF02687 FtsX-like permease family TI82_RS07740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TI82_RS07745 PF13340 Putative transposase of IS4/5 family (DUF4096) TI82_RS07750 PF01609 Transposase DDE domain TI82_RS07755 PF00692 dUTPase TI82_RS07760 PF13404 AsnC-type helix-turn-helix domain TI82_RS07760 PF01037 Lrp/AsnC ligand binding domain TI82_RS07780 PF07690 Major Facilitator Superfamily TI82_RS07790 PF00709 Adenylosuccinate synthetase TI82_RS07800 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TI82_RS07800 PF01842 ACT domain TI82_RS07800 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TI82_RS07810 PF01758 Sodium Bile acid symporter family TI82_RS07820 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TI82_RS07820 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TI82_RS07820 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TI82_RS07820 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TI82_RS07825 PF00004 ATPase family associated with various cellular activities (AAA) TI82_RS07825 PF17862 AAA+ lid domain TI82_RS07825 PF01434 Peptidase family M41 TI82_RS07825 PF06480 FtsH Extracellular TI82_RS07830 PF01171 PP-loop family TI82_RS07845 PF00691 OmpA family TI82_RS07850 PF04052 TolB amino-terminal domain TI82_RS07850 PF07676 WD40-like Beta Propeller Repeat TI82_RS07860 PF02472 Biopolymer transport protein ExbD/TolR TI82_RS07865 PF01618 MotA/TolQ/ExbB proton channel family TI82_RS07875 PF05491 RuvB C-terminal winged helix domain TI82_RS07875 PF17864 RuvB AAA lid domain TI82_RS07875 PF05496 Holliday junction DNA helicase RuvB P-loop domain TI82_RS07880 PF01330 RuvA N terminal domain TI82_RS07880 PF07499 RuvA, C-terminal domain TI82_RS07885 PF02075 Crossover junction endodeoxyribonuclease RuvC TI82_RS07910 PF08207 Elongation factor P (EF-P) KOW-like domain TI82_RS07910 PF09285 Elongation factor P, C-terminal TI82_RS07910 PF01132 Elongation factor P (EF-P) OB domain TI82_RS07915 PF00459 Inositol monophosphatase family TI82_RS07925 PF00691 OmpA family TI82_RS07925 PF01389 OmpA-like transmembrane domain TI82_RS07930 PF00005 ABC transporter TI82_RS07930 PF00664 ABC transporter transmembrane region TI82_RS07935 PF01197 Ribosomal protein L31 TI82_RS07940 PF01709 Transcriptional regulator TI82_RS07960 PF03741 Integral membrane protein TerC family TI82_RS07960 PF03471 Transporter associated domain TI82_RS07965 PF13277 YmdB-like protein TI82_RS07985 PF02780 Transketolase, C-terminal domain TI82_RS07985 PF02779 Transketolase, pyrimidine binding domain TI82_RS07985 PF00456 Transketolase, thiamine diphosphate binding domain TI82_RS07990 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TI82_RS07990 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain TI82_RS07995 PF00162 Phosphoglycerate kinase TI82_RS08005 PF13193 AMP-binding enzyme C-terminal domain TI82_RS08005 PF16177 Acetyl-coenzyme A synthetase N-terminus TI82_RS08005 PF00501 AMP-binding enzyme TI82_RS08030 PF00109 Beta-ketoacyl synthase, N-terminal domain TI82_RS08030 PF14765 Polyketide synthase dehydratase TI82_RS08030 PF08659 KR domain TI82_RS08030 PF02801 Beta-ketoacyl synthase, C-terminal domain TI82_RS08030 PF00550 Phosphopantetheine attachment site TI82_RS08030 PF08240 Alcohol dehydrogenase GroES-like domain TI82_RS08030 PF00698 Acyl transferase domain TI82_RS08030 PF16197 Ketoacyl-synthetase C-terminal extension TI82_RS08055 PF00731 AIR carboxylase TI82_RS08060 PF02222 ATP-grasp domain TI82_RS08060 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain TI82_RS08075 PF02887 Pyruvate kinase, alpha/beta domain TI82_RS08075 PF00224 Pyruvate kinase, barrel domain TI82_RS08090 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) TI82_RS08095 PF00005 ABC transporter TI82_RS08095 PF16326 ABC transporter C-terminal domain TI82_RS08110 PF01547 Bacterial extracellular solute-binding protein TI82_RS08115 PF00528 Binding-protein-dependent transport system inner membrane component TI82_RS08120 PF00005 ABC transporter TI82_RS08125 PF01435 Peptidase family M48 TI82_RS08130 PF03475 3-alpha domain TI82_RS08130 PF03473 MOSC domain TI82_RS08135 PF04542 Sigma-70 region 2 TI82_RS08135 PF00140 Sigma-70 factor, region 1.2 TI82_RS08135 PF04545 Sigma-70, region 4 TI82_RS08140 PF02559 CarD-like/TRCF domain TI82_RS08145 PF00037 4Fe-4S binding domain TI82_RS08145 PF11953 Domain of unknown function (DUF3470) TI82_RS08160 PF02803 Thiolase, C-terminal domain TI82_RS08160 PF00108 Thiolase, N-terminal domain TI82_RS08165 PF03928 Haem-degrading TI82_RS08170 PF01783 Ribosomal L32p protein family TI82_RS08175 PF00912 Transglycosylase TI82_RS08180 PF00348 Polyprenyl synthetase TI82_RS08185 PF04551 GcpE protein TI82_RS08195 PF07690 Major Facilitator Superfamily TI82_RS08200 PF00682 HMGL-like TI82_RS08200 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TI82_RS08200 PF00364 Biotin-requiring enzyme TI82_RS08200 PF02785 Biotin carboxylase C-terminal domain TI82_RS08200 PF02436 Conserved carboxylase domain TI82_RS08200 PF00289 Biotin carboxylase, N-terminal domain TI82_RS08205 PF13458 Periplasmic binding protein TI82_RS08210 PF13458 Periplasmic binding protein TI82_RS08225 PF12399 Branched-chain amino acid ATP-binding cassette transporter TI82_RS08225 PF00005 ABC transporter TI82_RS08230 PF02653 Branched-chain amino acid transport system / permease component TI82_RS08230 PF11862 Domain of unknown function (DUF3382) TI82_RS08235 PF02653 Branched-chain amino acid transport system / permease component TI82_RS08240 PF05544 Proline racemase TI82_RS08255 PF01047 MarR family TI82_RS08260 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain TI82_RS08265 PF02874 ATP synthase alpha/beta family, beta-barrel domain TI82_RS08265 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TI82_RS08270 PF00231 ATP synthase TI82_RS08275 PF00306 ATP synthase alpha/beta chain, C terminal domain TI82_RS08275 PF02874 ATP synthase alpha/beta family, beta-barrel domain TI82_RS08275 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TI82_RS08280 PF00213 ATP synthase delta (OSCP) subunit TI82_RS08290 PF00270 DEAD/DEAH box helicase TI82_RS08290 PF17764 3′ DNA-binding domain (3′BD) TI82_RS08290 PF18074 Primosomal protein N C-terminal domain TI82_RS08290 PF18319 PriA DNA helicase Cys-rich region (CRR) domain TI82_RS08295 PF00923 Transaldolase/Fructose-6-phosphate aldolase TI82_RS08305 PF13603 Leucyl-tRNA synthetase, Domain 2 TI82_RS08305 PF08264 Anticodon-binding domain of tRNA TI82_RS08305 PF00133 tRNA synthetases class I (I, L, M and V) TI82_RS08305 PF09334 tRNA synthetases class I (M) TI82_RS08310 PF01168 Alanine racemase, N-terminal domain TI82_RS08320 PF06233 Usg-like family TI82_RS08325 PF00501 AMP-binding enzyme TI82_RS08325 PF13193 AMP-binding enzyme C-terminal domain TI82_RS08325 PF16177 Acetyl-coenzyme A synthetase N-terminus TI82_RS08335 PF01435 Peptidase family M48 TI82_RS08340 PF01029 NusB family TI82_RS08340 PF01189 16S rRNA methyltransferase RsmB/F TI82_RS08350 PF01808 AICARFT/IMPCHase bienzyme TI82_RS08350 PF02142 MGS-like domain TI82_RS08355 PF11700 Vacuole effluxer Atg22 like TI82_RS08360 PF05088 Bacterial NAD-glutamate dehydrogenase TI82_RS08370 PF04536 TPM domain TI82_RS08375 PF04011 LemA family TI82_RS08380 PF00886 Ribosomal protein S16 TI82_RS08385 PF01817 Chorismate mutase type II TI82_RS08385 PF02153 Prephenate dehydrogenase TI82_RS08390 PF02978 Signal peptide binding domain TI82_RS08390 PF02881 SRP54-type protein, helical bundle domain TI82_RS08390 PF00448 SRP54-type protein, GTPase domain TI82_RS08400 PF00484 Carbonic anhydrase TI82_RS08405 PF08543 Phosphomethylpyrimidine kinase TI82_RS08415 PF00171 Aldehyde dehydrogenase family TI82_RS08420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TI82_RS08420 PF03466 LysR substrate binding domain TI82_RS08435 PF00293 NUDIX domain TI82_RS08440 PF03572 Peptidase family S41 TI82_RS08440 PF13180 PDZ domain TI82_RS08445 PF01551 Peptidase family M23 TI82_RS08455 PF02590 Predicted SPOUT methyltransferase TI82_RS08465 PF01467 Cytidylyltransferase-like TI82_RS08470 PF00171 Aldehyde dehydrogenase family TI82_RS08475 PF01472 PUA domain TI82_RS08475 PF00696 Amino acid kinase family TI82_RS08480 PF01926 50S ribosome-binding GTPase TI82_RS08480 PF01018 GTP1/OBG TI82_RS08485 PF03895 YadA-like membrane anchor domain TI82_RS08500 PF01016 Ribosomal L27 protein TI82_RS08505 PF00829 Ribosomal prokaryotic L21 protein TI82_RS08515 PF13610 DDE domain TI82_RS08525 PF03591 AzlC protein TI82_RS08530 PF13610 DDE domain TI82_RS08580 PF04225 Opacity-associated protein A LysM-like domain TI82_RS08580 PF01551 Peptidase family M23 TI82_RS08585 PF03734 L,D-transpeptidase catalytic domain TI82_RS08585 PF01476 LysM domain TI82_RS08590 PF02861 Clp amino terminal domain, pathogenicity island component TI82_RS08590 PF07724 AAA domain (Cdc48 subfamily) TI82_RS08590 PF00004 ATPase family associated with various cellular activities (AAA) TI82_RS08590 PF10431 C-terminal, D2-small domain, of ClpB protein TI82_RS08590 PF17871 AAA lid domain TI82_RS08600 PF17827 PrmC N-terminal domain TI82_RS08600 PF05175 Methyltransferase small domain TI82_RS08605 PF00472 RF-1 domain TI82_RS08605 PF03462 PCRF domain TI82_RS08610 PF05524 PEP-utilising enzyme, N-terminal TI82_RS08610 PF00391 PEP-utilising enzyme, mobile domain TI82_RS08610 PF02896 PEP-utilising enzyme, TIM barrel domain TI82_RS08610 PF01590 GAF domain TI82_RS08615 PF13840 ACT domain TI82_RS08615 PF01842 ACT domain TI82_RS08615 PF00696 Amino acid kinase family TI82_RS08635 PF00795 Carbon-nitrogen hydrolase TI82_RS08640 PF00462 Glutaredoxin TI82_RS08650 PF08241 Methyltransferase domain TI82_RS08680 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain TI82_RS08680 PF03900 Porphobilinogen deaminase, C-terminal domain TI82_RS08685 PF00814 Glycoprotease family TI82_RS08690 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus TI82_RS08690 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus TI82_RS08710 PF00892 EamA-like transporter family TI82_RS08720 PF13491 4TM region of DNA translocase FtsK/SpoIIIE TI82_RS08720 PF17854 FtsK alpha domain TI82_RS08720 PF09397 Ftsk gamma domain TI82_RS08720 PF01580 FtsK/SpoIIIE family TI82_RS08725 PF00909 Ammonium Transporter Family TI82_RS08735 PF01494 FAD binding domain TI82_RS08745 PF13085 2Fe-2S iron-sulfur cluster binding domain TI82_RS08745 PF13237 4Fe-4S dicluster domain TI82_RS08750 PF02910 Fumarate reductase flavoprotein C-term TI82_RS08750 PF00890 FAD binding domain TI82_RS08760 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit TI82_RS08770 PF00330 Aconitase family (aconitate hydratase) TI82_RS08775 PF01245 Ribosomal protein L19 TI82_RS08780 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin TI82_RS08810 PF01746 tRNA (Guanine-1)-methyltransferase TI82_RS08815 PF01782 RimM N-terminal domain TI82_RS08815 PF05239 PRC-barrel domain TI82_RS08820 PF02899 Phage integrase, N-terminal SAM-like domain TI82_RS08820 PF00589 Phage integrase family TI82_RS08830 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TI82_RS08830 PF07992 Pyridine nucleotide-disulphide oxidoreductase TI82_RS08840 PF01810 LysE type translocator TI82_RS08850 PF02817 e3 binding domain TI82_RS08850 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) TI82_RS08850 PF00364 Biotin-requiring enzyme TI82_RS08855 PF00676 Dehydrogenase E1 component TI82_RS08855 PF16078 2-oxoglutarate dehydrogenase N-terminus TI82_RS08855 PF16870 2-oxoglutarate dehydrogenase C-terminal TI82_RS08855 PF02779 Transketolase, pyrimidine binding domain TI82_RS08860 PF00549 CoA-ligase TI82_RS08860 PF02629 CoA binding domain TI82_RS08865 PF08442 ATP-grasp domain TI82_RS08865 PF00549 CoA-ligase TI82_RS08870 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain TI82_RS08870 PF00056 lactate/malate dehydrogenase, NAD binding domain TI82_RS08875 PF03969 AFG1-like ATPase TI82_RS08880 PF02974 Protease inhibitor Inh TI82_RS08885 PF01678 Diaminopimelate epimerase TI82_RS08890 PF00919 Uncharacterized protein family UPF0004 TI82_RS08890 PF04055 Radical SAM superfamily TI82_RS08895 PF02881 SRP54-type protein, helical bundle domain TI82_RS08895 PF00448 SRP54-type protein, GTPase domain TI82_RS08900 PF04279 Intracellular septation protein A TI82_RS08905 PF00753 Metallo-beta-lactamase superfamily TI82_RS08905 PF16123 Hydroxyacylglutathione hydrolase C-terminus TI82_RS08920 PF00293 NUDIX domain TI82_RS08930 PF01960 ArgJ family TI82_RS08935 PF00639 PPIC-type PPIASE domain TI82_RS08945 PF07517 SecA DEAD-like domain TI82_RS08945 PF07516 SecA Wing and Scaffold domain TI82_RS08945 PF02810 SEC-C motif TI82_RS08945 PF01043 SecA preprotein cross-linking domain TI82_RS08960 PF00884 Sulfatase TI82_RS08960 PF08019 Phosphoethanolamine transferase EptA/EptB TI82_RS08980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TI82_RS08980 PF03466 LysR substrate binding domain TI82_RS08985 PF00497 Bacterial extracellular solute-binding proteins, family 3 TI82_RS08990 PF00528 Binding-protein-dependent transport system inner membrane component TI82_RS08995 PF00528 Binding-protein-dependent transport system inner membrane component TI82_RS09000 PF00005 ABC transporter TI82_RS09005 PF00491 Arginase family TI82_RS09010 PF10415 Fumarase C C-terminus TI82_RS09010 PF00206 Lyase TI82_RS09015 PF00005 ABC transporter TI82_RS09020 PF17763 Glutaminase/Asparaginase C-terminal domain TI82_RS09020 PF00710 Asparaginase, N-terminal TI82_RS09025 PF07729 FCD domain TI82_RS09025 PF00392 Bacterial regulatory proteins, gntR family TI82_RS09030 PF17763 Glutaminase/Asparaginase C-terminal domain TI82_RS09030 PF00710 Asparaginase, N-terminal TI82_RS09035 PF07690 Major Facilitator Superfamily TI82_RS09040 PF01053 Cys/Met metabolism PLP-dependent enzyme TI82_RS09055 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TI82_RS09055 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain TI82_RS09060 PF01012 Electron transfer flavoprotein domain TI82_RS09060 PF00766 Electron transfer flavoprotein FAD-binding domain TI82_RS09065 PF01012 Electron transfer flavoprotein domain TI82_RS09070 PF06508 Queuosine biosynthesis protein QueC TI82_RS09075 PF01242 6-pyruvoyl tetrahydropterin synthase TI82_RS09080 PF04055 Radical SAM superfamily TI82_RS09085 PF01923 Cobalamin adenosyltransferase TI82_RS09095 PF00106 short chain dehydrogenase TI82_RS09105 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 TI82_RS09110 PF08534 Redoxin TI82_RS09115 PF00206 Lyase TI82_RS09115 PF14698 Argininosuccinate lyase C-terminal TI82_RS09125 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain TI82_RS09125 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain TI82_RS09135 PF00156 Phosphoribosyl transferase domain TI82_RS09140 PF01209 ubiE/COQ5 methyltransferase family TI82_RS09145 PF00155 Aminotransferase class I and II TI82_RS09150 PF02153 Prephenate dehydrogenase TI82_RS09170 PF02325 YGGT family TI82_RS09175 PF00719 Inorganic pyrophosphatase TI82_RS09195 PF00005 ABC transporter TI82_RS09205 PF00230 Major intrinsic protein TI82_RS09210 PF03548 Outer membrane lipoprotein carrier protein LolA TI82_RS09225 PF00486 Transcriptional regulatory protein, C terminal TI82_RS09225 PF00072 Response regulator receiver domain TI82_RS09255 PF12951 Passenger-associated-transport-repeat TI82_RS09260 PF12951 Passenger-associated-transport-repeat TI82_RS09265 PF02592 Putative vitamin uptake transporter TI82_RS09270 PF00830 Ribosomal L28 family TI82_RS09280 PF13411 MerR HTH family regulatory protein TI82_RS09285 PF00403 Heavy-metal-associated domain TI82_RS09300 PF11775 Cobalamin biosynthesis protein CobT VWA domain TI82_RS09300 PF06213 Cobalamin biosynthesis protein CobT TI82_RS09305 PF12556 Cobaltochelatase CobS subunit N terminal TI82_RS09305 PF08406 CbbQ/NirQ/NorQ C-terminal TI82_RS09305 PF07728 AAA domain (dynein-related subfamily) TI82_RS09310 PF00226 DnaJ domain TI82_RS09315 PF01722 BolA-like protein TI82_RS09320 PF01595 Cyclin M transmembrane N-terminal domain TI82_RS09320 PF03471 Transporter associated domain TI82_RS09320 PF00571 CBS domain TI82_RS09325 PF01761 3-dehydroquinate synthase TI82_RS09330 PF01202 Shikimate kinase TI82_RS09340 PF00589 Phage integrase family TI82_RS09340 PF02899 Phage integrase, N-terminal SAM-like domain TI82_RS09345 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit TI82_RS09360 PF07683 Cobalamin synthesis protein cobW C-terminal domain TI82_RS09360 PF02492 CobW/HypB/UreG, nucleotide-binding domain TI82_RS09365 PF00768 D-alanyl-D-alanine carboxypeptidase TI82_RS09365 PF07943 Penicillin-binding protein 5, C-terminal domain TI82_RS09370 PF01546 Peptidase family M20/M25/M40 TI82_RS09370 PF07687 Peptidase dimerisation domain TI82_RS09395 PF05199 GMC oxidoreductase TI82_RS09395 PF00732 GMC oxidoreductase TI82_RS09405 PF05199 GMC oxidoreductase TI82_RS09405 PF00732 GMC oxidoreductase TI82_RS09410 PF00171 Aldehyde dehydrogenase family TI82_RS09415 PF00378 Enoyl-CoA hydratase/isomerase TI82_RS09420 PF01144 Coenzyme A transferase TI82_RS09425 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TI82_RS09425 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TI82_RS09430 PF00356 Bacterial regulatory proteins, lacI family TI82_RS09440 PF00296 Luciferase-like monooxygenase TI82_RS09450 PF02653 Branched-chain amino acid transport system / permease component TI82_RS09455 PF00005 ABC transporter TI82_RS09465 PF02195 ParB-like nuclease domain TI82_RS09465 PF17762 HTH domain found in ParB protein TI82_RS09470 PF13614 AAA domain TI82_RS09475 PF02527 rRNA small subunit methyltransferase G TI82_RS09480 PF13932 GidA associated domain TI82_RS09480 PF01134 Glucose inhibited division protein A TI82_RS09485 PF10396 GTP-binding protein TrmE N-terminus TI82_RS09485 PF12631 MnmE helical domain TI82_RS09485 PF01926 50S ribosome-binding GTPase TI82_RS09490 PF03190 Protein of unknown function, DUF255 TI82_RS09495 PF07497 Rho termination factor, RNA-binding domain TI82_RS09495 PF07498 Rho termination factor, N-terminal domain TI82_RS09495 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TI82_RS09505 PF03653 Uncharacterised protein family (UPF0093) TI82_RS09510 PF01208 Uroporphyrinogen decarboxylase (URO-D) TI82_RS09515 PF03618 Kinase/pyrophosphorylase TI82_RS09520 PF02545 Maf-like protein TI82_RS09525 PF18317 Shikimate 5'-dehydrogenase C-terminal domain TI82_RS09525 PF01488 Shikimate / quinate 5-dehydrogenase TI82_RS09525 PF08501 Shikimate dehydrogenase substrate binding domain TI82_RS09530 PF01121 Dephospho-CoA kinase TI82_RS09535 PF00929 Exonuclease TI82_RS09540 PF02556 Preprotein translocase subunit SecB TI82_RS09545 PF04186 FxsA cytoplasmic membrane protein TI82_RS09550 PF04280 Tim44-like domain TI82_RS09560 PF01713 Smr domain TI82_RS09565 PF01381 Helix-turn-helix TI82_RS09575 PF00004 ATPase family associated with various cellular activities (AAA) TI82_RS09575 PF10431 C-terminal, D2-small domain, of ClpB protein TI82_RS09575 PF07724 AAA domain (Cdc48 subfamily) TI82_RS09580 PF00227 Proteasome subunit TI82_RS09585 PF00475 Imidazoleglycerol-phosphate dehydratase TI82_RS09595 PF00117 Glutamine amidotransferase class-I TI82_RS09600 PF00977 Histidine biosynthesis protein TI82_RS09605 PF00977 Histidine biosynthesis protein TI82_RS09610 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase TI82_RS09615 PF00485 Phosphoribulokinase / Uridine kinase family TI82_RS09620 PF00472 RF-1 domain TI82_RS09625 PF01293 Phosphoenolpyruvate carboxykinase TI82_RS09630 PF00072 Response regulator receiver domain TI82_RS09630 PF00486 Transcriptional regulatory protein, C terminal TI82_RS09635 PF13756 Stimulus-sensing domain TI82_RS09635 PF13755 Sensor N-terminal transmembrane domain TI82_RS09635 PF00512 His Kinase A (phospho-acceptor) domain TI82_RS09635 PF00672 HAMP domain TI82_RS09635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TI82_RS09640 PF02603 HPr Serine kinase N terminus TI82_RS09640 PF07475 HPr Serine kinase C-terminal domain TI82_RS09645 PF03610 PTS system fructose IIA component TI82_RS09645 PF03830 PTS system sorbose subfamily IIB component TI82_RS09650 PF00381 PTS HPr component phosphorylation site TI82_RS09655 PF05221 S-adenosyl-L-homocysteine hydrolase TI82_RS09655 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain TI82_RS09660 PF00512 His Kinase A (phospho-acceptor) domain TI82_RS09660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TI82_RS09665 PF01636 Phosphotransferase enzyme family TI82_RS09670 PF12804 MobA-like NTP transferase domain TI82_RS09675 PF12705 PD-(D/E)XK nuclease superfamily TI82_RS09680 PF00580 UvrD/REP helicase N-terminal domain TI82_RS09680 PF12705 PD-(D/E)XK nuclease superfamily TI82_RS09680 PF13361 UvrD-like helicase C-terminal domain TI82_RS09685 PF00085 Thioredoxin TI82_RS09690 PF08245 Mur ligase middle domain TI82_RS09695 PF01039 Carboxyl transferase domain TI82_RS09700 PF00290 Tryptophan synthase alpha chain TI82_RS09710 PF00291 Pyridoxal-phosphate dependent enzyme TI82_RS09715 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase TI82_RS09720 PF02698 DUF218 domain TI82_RS09735 PF03594 Benzoate membrane transport protein TI82_RS09750 PF00707 Translation initiation factor IF-3, C-terminal domain TI82_RS09750 PF05198 Translation initiation factor IF-3, N-terminal domain TI82_RS09755 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family TI82_RS09760 PF01632 Ribosomal protein L35 TI82_RS09765 PF00453 Ribosomal protein L20 TI82_RS09775 PF01409 tRNA synthetases class II core domain (F) TI82_RS09775 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain TI82_RS09780 PF03483 B3/4 domain TI82_RS09780 PF03484 tRNA synthetase B5 domain TI82_RS09780 PF03147 Ferredoxin-fold anticodon binding domain TI82_RS09780 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain TI82_RS09780 PF01588 Putative tRNA binding domain TI82_RS09785 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TI82_RS09785 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TI82_RS09790 PF00012 Hsp70 protein TI82_RS09795 PF00226 DnaJ domain TI82_RS09795 PF00684 DnaJ central domain TI82_RS09795 PF01556 DnaJ C terminal domain TI82_RS09800 PF13649 Methyltransferase domain TI82_RS09805 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family TI82_RS09815 PF08450 SMP-30/Gluconolactonase/LRE-like region TI82_RS09820 PF02951 Prokaryotic glutathione synthetase, N-terminal domain TI82_RS09820 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain TI82_RS09825 PF01078 Magnesium chelatase, subunit ChlI TI82_RS09825 PF13335 Magnesium chelatase, subunit ChlI C-terminal TI82_RS09835 PF03330 Lytic transglycolase TI82_RS09840 PF04304 Protein of unknown function (DUF454) TI82_RS09845 PF12849 PBP superfamily domain TI82_RS09850 PF00528 Binding-protein-dependent transport system inner membrane component TI82_RS09855 PF00528 Binding-protein-dependent transport system inner membrane component TI82_RS09860 PF00005 ABC transporter TI82_RS09865 PF01895 PhoU domain TI82_RS09870 PF00072 Response regulator receiver domain TI82_RS09870 PF00486 Transcriptional regulatory protein, C terminal TI82_RS09875 PF07486 Cell Wall Hydrolase TI82_RS09885 PF02073 Thermophilic metalloprotease (M29) TI82_RS09890 PF00210 Ferritin-like domain TI82_RS09895 PF00814 Glycoprotease family TI82_RS09900 PF00583 Acetyltransferase (GNAT) family TI82_RS09905 PF01553 Acyltransferase TI82_RS09910 PF01938 TRAM domain TI82_RS09910 PF00919 Uncharacterized protein family UPF0004 TI82_RS09910 PF04055 Radical SAM superfamily TI82_RS09915 PF02562 PhoH-like protein TI82_RS09920 PF02130 Uncharacterized protein family UPF0054 TI82_RS09925 PF00571 CBS domain TI82_RS09925 PF03471 Transporter associated domain TI82_RS09930 PF00795 Carbon-nitrogen hydrolase TI82_RS09935 PF01381 Helix-turn-helix TI82_RS09940 PF00438 S-adenosylmethionine synthetase, N-terminal domain TI82_RS09940 PF02772 S-adenosylmethionine synthetase, central domain TI82_RS09940 PF02773 S-adenosylmethionine synthetase, C-terminal domain TI82_RS09945 PF02390 Putative methyltransferase TI82_RS09950 PF02576 RimP N-terminal domain TI82_RS09950 PF17384 RimP C-terminal SH3 domain TI82_RS09955 PF13184 NusA-like KH domain TI82_RS09955 PF00575 S1 RNA binding domain TI82_RS09955 PF08529 NusA N-terminal domain TI82_RS09965 PF00009 Elongation factor Tu GTP binding domain TI82_RS09965 PF08364 Bacterial translation initiation factor IF-2 associated region TI82_RS09965 PF04760 Translation initiation factor IF-2, N-terminal region TI82_RS09965 PF11987 Translation-initiation factor 2 TI82_RS09970 PF02033 Ribosome-binding factor A TI82_RS09975 PF09157 Pseudouridine synthase II TruB, C-terminal TI82_RS09975 PF16198 tRNA pseudouridylate synthase B C-terminal domain TI82_RS09975 PF01509 TruB family pseudouridylate synthase (N terminal domain) TI82_RS09980 PF00312 Ribosomal protein S15 TI82_RS09985 PF03725 3' exoribonuclease family, domain 2 TI82_RS09985 PF00575 S1 RNA binding domain TI82_RS09985 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain TI82_RS09985 PF01138 3' exoribonuclease family, domain 1 TI82_RS09985 PF00013 KH domain TI82_RS09990 PF05175 Methyltransferase small domain TI82_RS09990 PF08468 Methyltransferase small domain N-terminal TI82_RS10000 PF02801 Beta-ketoacyl synthase, C-terminal domain TI82_RS10000 PF00109 Beta-ketoacyl synthase, N-terminal domain TI82_RS10005 PF07977 FabA-like domain TI82_RS10010 PF01475 Ferric uptake regulator family TI82_RS10015 PF03180 NLPA lipoprotein TI82_RS10025 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TI82_RS10025 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TI82_RS10030 PF00561 alpha/beta hydrolase fold TI82_RS10035 PF00877 NlpC/P60 family TI82_RS10045 PF02789 Cytosol aminopeptidase family, N-terminal domain TI82_RS10045 PF00883 Cytosol aminopeptidase family, catalytic domain TI82_RS10055 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain TI82_RS10055 PF06827 Zinc finger found in FPG and IleRS TI82_RS10055 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain TI82_RS10060 PF00378 Enoyl-CoA hydratase/isomerase TI82_RS10070 PF01649 Ribosomal protein S20 TI82_RS10180 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TI82_RS10180 PF00364 Biotin-requiring enzyme TI82_RS10180 PF00289 Biotin carboxylase, N-terminal domain TI82_RS10180 PF02785 Biotin carboxylase C-terminal domain TI82_RS10230 PF00575 S1 RNA binding domain TI82_RS10650 PF06165 Glycosyltransferase family 36 TI82_RS10650 PF10091 Putative glucoamylase TI82_RS10650 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain TI82_RS10665 PF06165 Glycosyltransferase family 36 TI82_RS10665 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain TI82_RS10665 PF10091 Putative glucoamylase TI82_RS10745 PF01367 5'-3' exonuclease, C-terminal SAM fold TI82_RS10745 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain TI82_RS10745 PF00476 DNA polymerase family A TI82_RS10745 PF01612 3'-5' exonuclease TI82_RS10750 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain TI82_RS10750 PF01612 3'-5' exonuclease TI82_RS10750 PF01367 5'-3' exonuclease, C-terminal SAM fold TI82_RS10750 PF00476 DNA polymerase family A TI82_RS10790 PF13673 Acetyltransferase (GNAT) domain TI82_RS10840 PF03023 Lipid II flippase MurJ TI82_RS10850 PF08335 GlnD PII-uridylyltransferase TI82_RS10850 PF01842 ACT domain TI82_RS10850 PF01966 HD domain TI82_RS11020 PF10414 Sirohaem synthase dimerisation region TI82_RS11020 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TI82_RS11155 PF00664 ABC transporter transmembrane region TI82_RS11155 PF00005 ABC transporter TI82_RS11190 PF00403 Heavy-metal-associated domain TI82_RS11430 PF00873 AcrB/AcrD/AcrF family TI82_RS11460 PF01180 Dihydroorotate dehydrogenase TI82_RS11510 PF00501 AMP-binding enzyme TI82_RS11510 PF13193 AMP-binding enzyme C-terminal domain TI82_RS11580 PF00202 Aminotransferase class-III TI82_RS11745 PF01554 MatE TI82_RS11805 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase TI82_RS11805 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TI82_RS11950 PF07486 Cell Wall Hydrolase TI82_RS12015 PF06965 Na+/H+ antiporter 1 TI82_RS12060 PF02092 Glycyl-tRNA synthetase beta subunit TI82_RS12060 PF05746 DALR anticodon binding domain TI82_RS12065 PF05746 DALR anticodon binding domain TI82_RS12065 PF02092 Glycyl-tRNA synthetase beta subunit TI82_RS12175 PF05726 Pirin C-terminal cupin domain TI82_RS12175 PF02678 Pirin TI82_RS12220 PF00664 ABC transporter transmembrane region TI82_RS12220 PF00005 ABC transporter TI82_RS12325 PF00510 Cytochrome c oxidase subunit III TI82_RS12370 PF00990 Diguanylate cyclase, GGDEF domain TI82_RS12370 PF13426 PAS domain TI82_RS12370 PF00563 EAL domain TI82_RS12475 PF02463 RecF/RecN/SMC N terminal domain TI82_RS12680 PF00171 Aldehyde dehydrogenase family TI82_RS12705 PF05199 GMC oxidoreductase TI82_RS12705 PF00732 GMC oxidoreductase TI82_RS12740 PF07690 Major Facilitator Superfamily TI82_RS12965 PF08335 GlnD PII-uridylyltransferase TI82_RS12965 PF03710 Glutamate-ammonia ligase adenylyltransferase TI82_RS13005 PF11940 Domain of unknown function (DUF3458) Ig-like fold TI82_RS13005 PF17432 Domain of unknown function (DUF3458_C) ARM repeats TI82_RS13005 PF01433 Peptidase family M1 domain TI82_RS13100 PF02530 Porin subfamily TI82_RS13290 PF00005 ABC transporter TI82_RS13290 PF12848 ABC transporter TI82_RS13735 PF01053 Cys/Met metabolism PLP-dependent enzyme TI82_RS13830 PF17770 Ribonuclease J C-terminal domain TI82_RS13830 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain TI82_RS13830 PF12706 Beta-lactamase superfamily domain TI82_RS13920 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain TI82_RS13920 PF02769 AIR synthase related protein, C-terminal domain TI82_RS13920 PF00586 AIR synthase related protein, N-terminal domain TI82_RS14180 PF02637 GatB domain TI82_RS14180 PF02934 GatB/GatE catalytic domain TI82_RS14455 PF01494 FAD binding domain TI82_RS14595 PF01026 TatD related DNase TI82_RS14605 PF00005 ABC transporter TI82_RS14605 PF00664 ABC transporter transmembrane region TI82_RS14855 PF02867 Ribonucleotide reductase, barrel domain TI82_RS14855 PF08471 Class II vitamin B12-dependent ribonucleotide reductase TI82_RS15115 PF00873 AcrB/AcrD/AcrF family TI82_RS15125 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TI82_RS15350 PF03772 Competence protein TI82_RS15350 PF00753 Metallo-beta-lactamase superfamily TI82_RS15395 PF07244 Surface antigen variable number repeat TI82_RS15395 PF01103 Surface antigen TI82_RS15645 PF00411 Ribosomal protein S11 TI82_RS15715 PF00623 RNA polymerase Rpb1, domain 2 TI82_RS15715 PF05000 RNA polymerase Rpb1, domain 4 TI82_RS15715 PF04983 RNA polymerase Rpb1, domain 3 TI82_RS15715 PF04998 RNA polymerase Rpb1, domain 5 TI82_RS15715 PF04997 RNA polymerase Rpb1, domain 1