TI82_RS00005	SM00382	ATPases associated with a variety of cellular activities
TI82_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
TI82_RS00010	SM00480	DNA polymerase III beta subunit
TI82_RS00015	SM00382	ATPases associated with a variety of cellular activities
TI82_RS00030	SM00382	ATPases associated with a variety of cellular activities
TI82_RS00080	SM00878	Biotin carboxylase C-terminal domain
TI82_RS00100	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
TI82_RS00130	SM00316	Ribosomal protein S1-like RNA-binding domain
TI82_RS00155	SM00493	TI82_RS00155
TI82_RS00165	SM00382	ATPases associated with a variety of cellular activities
TI82_RS00320	SM00481	DNA polymerase alpha chain like domain
TI82_RS00400	SM00382	ATPases associated with a variety of cellular activities
TI82_RS00435	SM00382	ATPases associated with a variety of cellular activities
TI82_RS00470	SM00448	cheY-homologous receiver domain
TI82_RS00510	SM00382	ATPases associated with a variety of cellular activities
TI82_RS00515	SM01068	Putative carbohydrate binding domain
TI82_RS00560	SM00474	3'-5' exonuclease
TI82_RS00570	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
TI82_RS00570	SM00474	3'-5' exonuclease
TI82_RS00570	SM00475	5'-3' exonuclease
TI82_RS00570	SM00479	TI82_RS00570
TI82_RS00570	SM00482	DNA polymerase A domain
TI82_RS00575	SM00487	DEAD-like helicases superfamily
TI82_RS00575	SM00490	helicase superfamily c-terminal domain
TI82_RS00580	SM00387	Histidine kinase-like ATPases
TI82_RS00580	SM00433	TopoisomeraseII
TI82_RS00610	SM00487	DEAD-like helicases superfamily
TI82_RS00610	SM00490	helicase superfamily c-terminal domain
TI82_RS00610	SM00847	Helicase associated domain (HA2)  Add an annotation
TI82_RS00620	SM00387	Histidine kinase-like ATPases
TI82_RS00620	SM00388	His Kinase A (phosphoacceptor) domain
TI82_RS00635	SM00448	cheY-homologous receiver domain
TI82_RS00650	SM00932	Scaffold protein Nfu/NifU N terminal
TI82_RS00670	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
TI82_RS00680	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
TI82_RS00680	SM00534	ATPase domain of DNA mismatch repair MUTS family
TI82_RS00695	SM00967	RNA 2'-O ribose methyltransferase substrate binding
TI82_RS00710	SM00411	bacterial (prokaryotic) histone like domain
TI82_RS00730	SM00382	ATPases associated with a variety of cellular activities
TI82_RS00765	SM00478	endonuclease III
TI82_RS00765	SM00525	TI82_RS00765
TI82_RS00810	SM00729	Elongator protein 3, MiaB family, Radical SAM
TI82_RS00850	SM00886	Stress responsive A/B Barrel Domain
TI82_RS00870	SM01018	B12 binding domain
TI82_RS00875	SM00421	helix_turn_helix, Lux Regulon
TI82_RS00905	SM00419	helix_turn_helix, cAMP Regulatory protein
TI82_RS00910	SM00421	helix_turn_helix, Lux Regulon
TI82_RS00915	SM00420	helix_turn_helix, Deoxyribose operon repressor
TI82_RS00915	SM01134	TI82_RS00915
TI82_RS00935	SM00829	Enoylreductase
TI82_RS01005	SM00052	Putative diguanylate phosphodiesterase
TI82_RS01005	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
TI82_RS01005	SM00091	PAS domain
TI82_RS01005	SM00267	diguanylate cyclase
TI82_RS01015	SM00422	helix_turn_helix, mercury resistance
TI82_RS01025	SM00382	ATPases associated with a variety of cellular activities
TI82_RS01045	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
TI82_RS01075	SM00346	helix_turn_helix isocitrate lyase regulation
TI82_RS01095	SM00382	ATPases associated with a variety of cellular activities
TI82_RS01100	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
TI82_RS01130	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
TI82_RS01165	SM00316	Ribosomal protein S1-like RNA-binding domain
TI82_RS01170	SM00226	Low molecular weight phosphatase family
TI82_RS01210	SM01040	BRO family, N-terminal domain
TI82_RS01215	SM00857	Resolvase, N terminal domain
TI82_RS01265	SM00988	UreE urease accessory protein, N-terminal domain
TI82_RS01285	SM00387	Histidine kinase-like ATPases
TI82_RS01380	SM00062	Bacterial periplasmic substrate-binding proteins
TI82_RS01395	SM00387	Histidine kinase-like ATPases
TI82_RS01395	SM00388	His Kinase A (phosphoacceptor) domain
TI82_RS01440	SM00342	helix_turn_helix, arabinose operon control protein
TI82_RS01480	SM00421	helix_turn_helix, Lux Regulon
TI82_RS01480	SM00448	cheY-homologous receiver domain
TI82_RS01485	SM00387	Histidine kinase-like ATPases
TI82_RS01485	SM00388	His Kinase A (phosphoacceptor) domain
TI82_RS01485	SM00448	cheY-homologous receiver domain
TI82_RS01585	SM00421	helix_turn_helix, Lux Regulon
TI82_RS01585	SM00448	cheY-homologous receiver domain
TI82_RS01620	SM01092	CO dehydrogenase flavoprotein C-terminal domain
TI82_RS01625	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
TI82_RS01710	SM00342	helix_turn_helix, arabinose operon control protein
TI82_RS01795	SM00729	Elongator protein 3, MiaB family, Radical SAM
TI82_RS01850	SM00028	Tetratricopeptide repeats
TI82_RS01905	SM00267	diguanylate cyclase
TI82_RS01910	SM01209	TI82_RS01910
TI82_RS01910	SM01210	TI82_RS01910
TI82_RS01930	SM00271	DnaJ molecular chaperone homology domain
TI82_RS01945	SM00357	Cold shock protein domain
TI82_RS02010	SM00861	Transketolase, pyrimidine binding domain
TI82_RS02015	SM00363	S4 RNA-binding domain
TI82_RS02035	SM00257	Lysin motif
TI82_RS02040	SM00382	ATPases associated with a variety of cellular activities
TI82_RS02070	SM00382	ATPases associated with a variety of cellular activities
TI82_RS02075	SM00382	ATPases associated with a variety of cellular activities
TI82_RS02105	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
TI82_RS02110	SM00822	TI82_RS02110
TI82_RS02115	SM00823	Phosphopantetheine attachment site
TI82_RS02120	SM00825	Beta-ketoacyl synthase
TI82_RS02135	SM00072	Guanylate kinase homologues.
TI82_RS02220	SM00052	Putative diguanylate phosphodiesterase
TI82_RS02220	SM00267	diguanylate cyclase
TI82_RS02245	SM00052	Putative diguanylate phosphodiesterase
TI82_RS02275	SM00478	endonuclease III
TI82_RS02275	SM00525	TI82_RS02275
TI82_RS02290	SM00968	SMC proteins Flexible Hinge Domain
TI82_RS02325	SM00849	Metallo-beta-lactamase superfamily
TI82_RS02400	SM00382	ATPases associated with a variety of cellular activities
TI82_RS02490	SM00382	ATPases associated with a variety of cellular activities
TI82_RS02525	SM00354	helix_turn _helix lactose operon repressor
TI82_RS02530	SM00342	helix_turn_helix, arabinose operon control protein
TI82_RS02565	SM00966	SpoVT / AbrB like domain 
TI82_RS02575	SM00345	helix_turn_helix gluconate operon transcriptional repressor
TI82_RS02575	SM00895	TI82_RS02575
TI82_RS02635	SM00760	Bacterial dnaA protein helix-turn-helix domain
TI82_RS02660	SM00387	Histidine kinase-like ATPases
TI82_RS02660	SM00388	His Kinase A (phosphoacceptor) domain
TI82_RS02790	SM00448	cheY-homologous receiver domain
TI82_RS02790	SM00862	Transcriptional regulatory protein, C terminal
TI82_RS02795	SM00387	Histidine kinase-like ATPases
TI82_RS02825	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
TI82_RS02830	SM00448	cheY-homologous receiver domain
TI82_RS02830	SM00862	Transcriptional regulatory protein, C terminal
TI82_RS02835	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TI82_RS02835	SM00387	Histidine kinase-like ATPases
TI82_RS02835	SM00388	His Kinase A (phosphoacceptor) domain
TI82_RS02850	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
TI82_RS02850	SM00387	Histidine kinase-like ATPases
TI82_RS02850	SM00388	His Kinase A (phosphoacceptor) domain
TI82_RS02870	SM00986	Uracil DNA glycosylase superfamily
TI82_RS02870	SM00987	UreE urease accessory protein, C-terminal domain 
TI82_RS02980	SM01130	TI82_RS02980
TI82_RS02990	SM00986	Uracil DNA glycosylase superfamily
TI82_RS02990	SM00987	UreE urease accessory protein, C-terminal domain 
TI82_RS03000	SM01409	TI82_RS03000
TI82_RS03005	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
TI82_RS03005	SM00954	Region found in RelA / SpoT proteins
TI82_RS03015	SM00100	Cyclic nucleotide-monophosphate binding domain
TI82_RS03015	SM00419	helix_turn_helix, cAMP Regulatory protein
TI82_RS03020	SM00729	Elongator protein 3, MiaB family, Radical SAM
TI82_RS03030	SM00342	helix_turn_helix, arabinose operon control protein
TI82_RS03050	SM00358	Double-stranded RNA binding motif
TI82_RS03050	SM00535	Ribonuclease III family
TI82_RS03125	SM00917	LeuA allosteric (dimerisation) domain
TI82_RS03140	SM00650	Ribosomal RNA adenine dimethylases
TI82_RS03185	SM00382	ATPases associated with a variety of cellular activities
TI82_RS03195	SM00562	TI82_RS03195
TI82_RS03220	SM00278	Helix-hairpin-helix DNA-binding motif class 1
TI82_RS03220	SM00465	GIY-YIG type nucleases (URI domain)
TI82_RS03260	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
TI82_RS03335	SM00479	TI82_RS03335
TI82_RS03350	SM00530	Helix-turn-helix XRE-family like proteins 
TI82_RS03400	SM00287	Bacterial SH3 domain homologues
TI82_RS03425	SM00014	Acid phosphatase homologues
TI82_RS03430	SM00062	Bacterial periplasmic substrate-binding proteins
TI82_RS03445	SM00382	ATPases associated with a variety of cellular activities
TI82_RS03470	SM00341	Helicase and RNase D C-terminal
TI82_RS03470	SM00474	3'-5' exonuclease
TI82_RS03485	SM00434	DNA Topoisomerase IV
TI82_RS03500	SM01004	Delta-aminolevulinic acid dehydratase
TI82_RS03515	SM00347	helix_turn_helix multiple antibiotic resistance protein
TI82_RS03585	SM00411	bacterial (prokaryotic) histone like domain
TI82_RS03590	SM00422	helix_turn_helix, mercury resistance
TI82_RS03635	SM00859	Semialdehyde dehydrogenase, NAD binding domain
TI82_RS03730	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
TI82_RS03735	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
TI82_RS03780	SM00849	Metallo-beta-lactamase superfamily
TI82_RS03805	SM00382	ATPases associated with a variety of cellular activities
TI82_RS03810	SM00481	DNA polymerase alpha chain like domain
TI82_RS03830	SM00363	S4 RNA-binding domain
TI82_RS03830	SM01390	TI82_RS03830
TI82_RS03875	SM01211	TI82_RS03875
TI82_RS03910	SM00998	Adenylosuccinate lyase C-terminus
TI82_RS03925	SM00829	Enoylreductase
TI82_RS03930	SM00825	Beta-ketoacyl synthase
TI82_RS04005	SM00344	helix_turn_helix ASNC type
TI82_RS04010	SM00986	Uracil DNA glycosylase superfamily
TI82_RS04010	SM00987	UreE urease accessory protein, C-terminal domain 
TI82_RS04015	SM00318	Staphylococcal nuclease homologues
TI82_RS04020	SM00671	Sel1-like repeats.
TI82_RS04040	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
TI82_RS04045	SM00836	DALR anticodon binding domain
TI82_RS04045	SM01016	Arginyl tRNA synthetase N terminal dom
TI82_RS04105	SM00257	Lysin motif
TI82_RS04115	SM01323	TI82_RS04115
TI82_RS04165	SM00845	GatB domain
TI82_RS04190	SM00878	Biotin carboxylase C-terminal domain
TI82_RS04230	SM00646	TI82_RS04230
TI82_RS04240	SM00937	TI82_RS04240
TI82_RS04300	SM00382	ATPases associated with a variety of cellular activities
TI82_RS04335	SM00487	DEAD-like helicases superfamily
TI82_RS04335	SM00490	helicase superfamily c-terminal domain
TI82_RS04405	SM00062	Bacterial periplasmic substrate-binding proteins
TI82_RS04405	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
TI82_RS04420	SM00729	Elongator protein 3, MiaB family, Radical SAM
TI82_RS04585	SM00936	Penicillin-binding protein 5, C-terminal domain 
TI82_RS04610	SM00849	Metallo-beta-lactamase superfamily
TI82_RS04615	SM00382	ATPases associated with a variety of cellular activities
TI82_RS04640	SM01230	TI82_RS04640
TI82_RS04645	SM00938	Nitrogen regulatory protein P-II
TI82_RS04705	SM00919	Malic enzyme, NAD binding domain
TI82_RS04705	SM01274	TI82_RS04705
TI82_RS04710	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
TI82_RS04720	SM00382	ATPases associated with a variety of cellular activities
TI82_RS04760	SM00905	Dihydroneopterin aldolase
TI82_RS04800	SM00091	PAS domain
TI82_RS04800	SM00387	Histidine kinase-like ATPases
TI82_RS04800	SM00388	His Kinase A (phosphoacceptor) domain
TI82_RS04800	SM00448	cheY-homologous receiver domain
TI82_RS04840	SM00852	Probable molybdopterin binding domain
TI82_RS04860	SM00487	DEAD-like helicases superfamily
TI82_RS04860	SM00490	helicase superfamily c-terminal domain
TI82_RS04870	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
TI82_RS04875	SM00450	Rhodanese Homology Domain
TI82_RS04885	SM00267	diguanylate cyclase
TI82_RS04915	SM00028	Tetratricopeptide repeats
TI82_RS04935	SM00903	Flavin reductase like domain
TI82_RS04950	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
TI82_RS04960	SM01234	TI82_RS04960
TI82_RS05015	SM00857	Resolvase, N terminal domain
TI82_RS05020	SM01040	BRO family, N-terminal domain
TI82_RS05095	SM00434	DNA Topoisomerase IV
TI82_RS05105	SM00072	Guanylate kinase homologues.
TI82_RS05110	SM00345	helix_turn_helix gluconate operon transcriptional repressor
TI82_RS05110	SM00866	TI82_RS05110
TI82_RS05125	SM00411	bacterial (prokaryotic) histone like domain
TI82_RS05130	SM00382	ATPases associated with a variety of cellular activities
TI82_RS05130	SM00464	Found in ATP-dependent protease La (LON)
TI82_RS05135	SM00382	ATPases associated with a variety of cellular activities
TI82_RS05135	SM00994	ClpX C4-type zinc finger
TI82_RS05135	SM01086	C-terminal, D2-small domain, of ClpB protein
TI82_RS05165	SM00382	ATPases associated with a variety of cellular activities
TI82_RS05165	SM00448	cheY-homologous receiver domain
TI82_RS05170	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TI82_RS05170	SM00387	Histidine kinase-like ATPases
TI82_RS05170	SM00388	His Kinase A (phosphoacceptor) domain
TI82_RS05175	SM00382	ATPases associated with a variety of cellular activities
TI82_RS05175	SM00448	cheY-homologous receiver domain
TI82_RS05180	SM00387	Histidine kinase-like ATPases
TI82_RS05180	SM00388	His Kinase A (phosphoacceptor) domain
TI82_RS05200	SM00822	TI82_RS05200
TI82_RS05210	SM00729	Elongator protein 3, MiaB family, Radical SAM
TI82_RS05230	SM00861	Transketolase, pyrimidine binding domain
TI82_RS05250	SM01192	TI82_RS05250
TI82_RS05250	SM01193	TI82_RS05250
TI82_RS05300	SM00852	Probable molybdopterin binding domain
TI82_RS05355	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
TI82_RS05420	SM00382	ATPases associated with a variety of cellular activities
TI82_RS05420	SM01086	C-terminal, D2-small domain, of ClpB protein
TI82_RS05460	SM00422	helix_turn_helix, mercury resistance
TI82_RS05495	SM00530	Helix-turn-helix XRE-family like proteins 
TI82_RS05505	SM00878	Biotin carboxylase C-terminal domain
TI82_RS05550	SM01329	TI82_RS05550
TI82_RS05555	SM00098	Alkaline phosphatase homologues
TI82_RS05560	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
TI82_RS05565	SM00382	ATPases associated with a variety of cellular activities
TI82_RS05580	SM00382	ATPases associated with a variety of cellular activities
TI82_RS05585	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
TI82_RS05595	SM00662	RNA polymerases D
TI82_RS05660	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
TI82_RS05665	SM01374	TI82_RS05665
TI82_RS05685	SM00322	K homology RNA-binding domain
TI82_RS05700	SM01382	TI82_RS05700
TI82_RS05700	SM01383	TI82_RS05700
TI82_RS05720	SM01403	TI82_RS05720
TI82_RS05730	SM00838	Elongation factor G C-terminus
TI82_RS05730	SM00889	Elongation factor G, domain IV
TI82_RS05750	SM00663	RNA polymerase I subunit A N-terminus
TI82_RS05775	SM00649	Ribosomal protein L11/L12
TI82_RS05780	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
TI82_RS05780	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
TI82_RS05810	SM00967	RNA 2'-O ribose methyltransferase substrate binding
TI82_RS05815	SM00116	Domain in cystathionine beta-synthase and other proteins.
TI82_RS05845	SM00971	Serine acetyltransferase, N-terminal
TI82_RS05860	SM00357	Cold shock protein domain
TI82_RS05870	SM00978	TI82_RS05870
TI82_RS05980	SM00903	Flavin reductase like domain
TI82_RS06055	SM00833	Cobalamin synthesis protein cobW C-terminal domain
TI82_RS06100	SM00342	helix_turn_helix, arabinose operon control protein
TI82_RS06170	SM01091	Transporter associated domain
TI82_RS06195	SM00822	TI82_RS06195
TI82_RS06200	SM00382	ATPases associated with a variety of cellular activities
TI82_RS06220	SM00382	ATPases associated with a variety of cellular activities
TI82_RS06245	SM00382	ATPases associated with a variety of cellular activities
TI82_RS06275	SM00988	UreE urease accessory protein, N-terminal domain
TI82_RS06320	SM00382	ATPases associated with a variety of cellular activities
TI82_RS06430	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
TI82_RS06440	SM00244	prohibitin homologues
TI82_RS06445	SM00244	prohibitin homologues
TI82_RS06555	SM00292	breast cancer carboxy-terminal domain
TI82_RS06555	SM00532	Ligase N family
TI82_RS06575	SM00864	Tubulin/FtsZ family, GTPase domain
TI82_RS06575	SM00865	Tubulin/FtsZ family, C-terminal domain
TI82_RS06580	SM00842	Cell division protein FtsA
TI82_RS06660	SM00644	TI82_RS06660
TI82_RS06665	SM00271	DnaJ molecular chaperone homology domain
TI82_RS06675	SM00641	Glycosyl hydrolases family 25
TI82_RS06695	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
TI82_RS06715	SM00382	ATPases associated with a variety of cellular activities
TI82_RS06840	SM00400	zinc finger
TI82_RS06840	SM00493	TI82_RS06840
TI82_RS06855	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
TI82_RS06870	SM00850	LytTr DNA-binding domain
TI82_RS06875	SM00851	MGS-like domain
TI82_RS06875	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
TI82_RS06890	SM00357	Cold shock protein domain
TI82_RS06925	SM00344	helix_turn_helix ASNC type
TI82_RS06965	SM00287	Bacterial SH3 domain homologues
TI82_RS06970	SM00487	DEAD-like helicases superfamily
TI82_RS06970	SM00490	helicase superfamily c-terminal domain
TI82_RS06980	SM00357	Cold shock protein domain
TI82_RS06990	SM00849	Metallo-beta-lactamase superfamily
TI82_RS07005	SM00347	helix_turn_helix multiple antibiotic resistance protein
TI82_RS07010	SM00448	cheY-homologous receiver domain
TI82_RS07010	SM00862	Transcriptional regulatory protein, C terminal
TI82_RS07015	SM00387	Histidine kinase-like ATPases
TI82_RS07070	SM01400	TI82_RS07070
TI82_RS07125	SM00382	ATPases associated with a variety of cellular activities
TI82_RS07230	SM00917	LeuA allosteric (dimerisation) domain
TI82_RS07250	SM00344	helix_turn_helix ASNC type
TI82_RS07255	SM00347	helix_turn_helix multiple antibiotic resistance protein
TI82_RS07285	SM00382	ATPases associated with a variety of cellular activities
TI82_RS07290	SM00382	ATPases associated with a variety of cellular activities
TI82_RS07295	SM00382	ATPases associated with a variety of cellular activities
TI82_RS07330	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
TI82_RS07375	SM00448	cheY-homologous receiver domain
TI82_RS07375	SM00862	Transcriptional regulatory protein, C terminal
TI82_RS07415	SM00091	PAS domain
TI82_RS07415	SM00387	Histidine kinase-like ATPases
TI82_RS07415	SM00388	His Kinase A (phosphoacceptor) domain
TI82_RS07435	SM00382	ATPases associated with a variety of cellular activities
TI82_RS07445	SM00530	Helix-turn-helix XRE-family like proteins 
TI82_RS07500	SM01120	TI82_RS07500
TI82_RS07510	SM01120	TI82_RS07510
TI82_RS07535	SM00382	ATPases associated with a variety of cellular activities
TI82_RS07590	SM00346	helix_turn_helix isocitrate lyase regulation
TI82_RS07610	SM00507	HNH nucleases
TI82_RS07615	SM00478	endonuclease III
TI82_RS07640	SM00363	S4 RNA-binding domain
TI82_RS07660	SM00911	HWE histidine kinase
TI82_RS07670	SM00448	cheY-homologous receiver domain
TI82_RS07685	SM00387	Histidine kinase-like ATPases
TI82_RS07735	SM00382	ATPases associated with a variety of cellular activities
TI82_RS07760	SM00344	helix_turn_helix ASNC type
TI82_RS07790	SM00788	Adenylosuccinate synthetase
TI82_RS07825	SM00382	ATPases associated with a variety of cellular activities
TI82_RS07875	SM00382	ATPases associated with a variety of cellular activities
TI82_RS07880	SM00278	Helix-hairpin-helix DNA-binding motif class 1
TI82_RS07905	SM00671	Sel1-like repeats.
TI82_RS07910	SM00841	Elongation factor P, C-terminal
TI82_RS07910	SM01185	TI82_RS07910
TI82_RS07930	SM00382	ATPases associated with a variety of cellular activities
TI82_RS07985	SM00861	Transketolase, pyrimidine binding domain
TI82_RS07990	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
TI82_RS08030	SM00829	Enoylreductase
TI82_RS08055	SM01001	AIR carboxylase
TI82_RS08070	SM00028	Tetratricopeptide repeats
TI82_RS08095	SM00382	ATPases associated with a variety of cellular activities
TI82_RS08105	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
TI82_RS08120	SM00382	ATPases associated with a variety of cellular activities
TI82_RS08140	SM01058	CarD-like/TRCF domain
TI82_RS08150	SM00363	S4 RNA-binding domain
TI82_RS08200	SM00878	Biotin carboxylase C-terminal domain
TI82_RS08225	SM00382	ATPases associated with a variety of cellular activities
TI82_RS08250	SM00345	helix_turn_helix gluconate operon transcriptional repressor
TI82_RS08250	SM00895	TI82_RS08250
TI82_RS08255	SM00347	helix_turn_helix multiple antibiotic resistance protein
TI82_RS08265	SM00382	ATPases associated with a variety of cellular activities
TI82_RS08290	SM00487	DEAD-like helicases superfamily
TI82_RS08290	SM00490	helicase superfamily c-terminal domain
TI82_RS08350	SM00798	AICARFT/IMPCHase bienzyme
TI82_RS08350	SM00851	MGS-like domain
TI82_RS08385	SM00830	Chorismate mutase type II
TI82_RS08390	SM00382	ATPases associated with a variety of cellular activities
TI82_RS08390	SM00962	SRP54-type protein, GTPase domain
TI82_RS08390	SM00963	SRP54-type protein, helical bundle domain
TI82_RS08400	SM00947	Carbonic anhydrase
TI82_RS08440	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
TI82_RS08440	SM00245	tail specific protease
TI82_RS08475	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
TI82_RS08520	SM00530	Helix-turn-helix XRE-family like proteins 
TI82_RS08590	SM00382	ATPases associated with a variety of cellular activities
TI82_RS08590	SM01086	C-terminal, D2-small domain, of ClpB protein
TI82_RS08605	SM00937	TI82_RS08605
TI82_RS08610	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
TI82_RS08720	SM00382	ATPases associated with a variety of cellular activities
TI82_RS08720	SM00843	TI82_RS08720
TI82_RS08805	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
TI82_RS08855	SM00861	Transketolase, pyrimidine binding domain
TI82_RS08860	SM00881	CoA binding domain
TI82_RS08890	SM00729	Elongator protein 3, MiaB family, Radical SAM
TI82_RS08895	SM00382	ATPases associated with a variety of cellular activities
TI82_RS08895	SM00962	SRP54-type protein, GTPase domain
TI82_RS08895	SM00963	SRP54-type protein, helical bundle domain
TI82_RS08905	SM00849	Metallo-beta-lactamase superfamily
TI82_RS08945	SM00957	SecA DEAD-like domain
TI82_RS08945	SM00958	SecA preprotein cross-linking domain
TI82_RS08985	SM00062	Bacterial periplasmic substrate-binding proteins
TI82_RS09000	SM00382	ATPases associated with a variety of cellular activities
TI82_RS09015	SM00382	ATPases associated with a variety of cellular activities
TI82_RS09020	SM00870	TI82_RS09020
TI82_RS09025	SM00345	helix_turn_helix gluconate operon transcriptional repressor
TI82_RS09025	SM00895	TI82_RS09025
TI82_RS09030	SM00870	TI82_RS09030
TI82_RS09060	SM00893	Electron transfer flavoprotein domain
TI82_RS09065	SM00893	Electron transfer flavoprotein domain
TI82_RS09180	SM00563	Phosphate acyltransferases
TI82_RS09195	SM00382	ATPases associated with a variety of cellular activities
TI82_RS09220	SM00100	Cyclic nucleotide-monophosphate binding domain
TI82_RS09225	SM00448	cheY-homologous receiver domain
TI82_RS09225	SM00862	Transcriptional regulatory protein, C terminal
TI82_RS09260	SM00869	Autotransporter beta-domain
TI82_RS09280	SM00422	helix_turn_helix, mercury resistance
TI82_RS09300	SM00327	von Willebrand factor (vWF) type A domain
TI82_RS09310	SM00271	DnaJ molecular chaperone homology domain
TI82_RS09320	SM00116	Domain in cystathionine beta-synthase and other proteins.
TI82_RS09320	SM01091	Transporter associated domain
TI82_RS09360	SM00833	Cobalamin synthesis protein cobW C-terminal domain
TI82_RS09420	SM00882	Coenzyme A transferase
TI82_RS09430	SM00354	helix_turn _helix lactose operon repressor
TI82_RS09455	SM00382	ATPases associated with a variety of cellular activities
TI82_RS09465	SM00470	ParB-like nuclease domain
TI82_RS09480	SM01228	TI82_RS09480
TI82_RS09495	SM00357	Cold shock protein domain
TI82_RS09495	SM00382	ATPases associated with a variety of cellular activities
TI82_RS09495	SM00959	Rho termination factor, N-terminal domain
TI82_RS09535	SM00479	TI82_RS09535
TI82_RS09550	SM00978	TI82_RS09550
TI82_RS09555	SM00925	MltA specific insert domain
TI82_RS09560	SM00463	Small MutS-related domain
TI82_RS09565	SM00530	Helix-turn-helix XRE-family like proteins 
TI82_RS09575	SM00382	ATPases associated with a variety of cellular activities
TI82_RS09575	SM01086	C-terminal, D2-small domain, of ClpB protein
TI82_RS09630	SM00448	cheY-homologous receiver domain
TI82_RS09630	SM00862	Transcriptional regulatory protein, C terminal
TI82_RS09635	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TI82_RS09635	SM00387	Histidine kinase-like ATPases
TI82_RS09635	SM00388	His Kinase A (phosphoacceptor) domain
TI82_RS09655	SM00996	S-adenosyl-L-homocysteine hydrolase
TI82_RS09655	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
TI82_RS09660	SM00387	Histidine kinase-like ATPases
TI82_RS09660	SM00388	His Kinase A (phosphoacceptor) domain
TI82_RS09780	SM00873	B3/4 domain
TI82_RS09780	SM00874	tRNA synthetase B5 domain
TI82_RS09780	SM00896	Ferredoxin-fold anticodon binding domain
TI82_RS09795	SM00271	DnaJ molecular chaperone homology domain
TI82_RS09800	SM00650	Ribosomal RNA adenine dimethylases
TI82_RS09805	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
TI82_RS09825	SM00382	ATPases associated with a variety of cellular activities
TI82_RS09860	SM00382	ATPases associated with a variety of cellular activities
TI82_RS09870	SM00448	cheY-homologous receiver domain
TI82_RS09870	SM00862	Transcriptional regulatory protein, C terminal
TI82_RS09905	SM00563	Phosphate acyltransferases
TI82_RS09910	SM00729	Elongator protein 3, MiaB family, Radical SAM
TI82_RS09925	SM01091	Transporter associated domain
TI82_RS09935	SM00530	Helix-turn-helix XRE-family like proteins 
TI82_RS09955	SM00316	Ribosomal protein S1-like RNA-binding domain
TI82_RS09955	SM00322	K homology RNA-binding domain
TI82_RS09980	SM01387	TI82_RS09980
TI82_RS09985	SM00316	Ribosomal protein S1-like RNA-binding domain
TI82_RS09985	SM00322	K homology RNA-binding domain
TI82_RS10000	SM00825	Beta-ketoacyl synthase
TI82_RS10020	SM00287	Bacterial SH3 domain homologues
TI82_RS10040	SM00347	helix_turn_helix multiple antibiotic resistance protein
TI82_RS10055	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
TI82_RS10055	SM01232	TI82_RS10055
TI82_RS10180	SM00878	Biotin carboxylase C-terminal domain
TI82_RS10230	SM00316	Ribosomal protein S1-like RNA-binding domain
TI82_RS10745	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
TI82_RS10745	SM00475	5'-3' exonuclease
TI82_RS10750	SM00474	3'-5' exonuclease
TI82_RS10750	SM00479	TI82_RS10750
TI82_RS10850	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
TI82_RS12045	SM00028	Tetratricopeptide repeats
TI82_RS12220	SM00382	ATPases associated with a variety of cellular activities
TI82_RS14605	SM00382	ATPases associated with a variety of cellular activities
