BSS2_RS00005	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
BSS2_RS00010	SM00480	DNA polymerase III beta subunit
BSS2_RS00015	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS00030	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS00080	SM00878	Biotin carboxylase C-terminal domain
BSS2_RS00100	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
BSS2_RS00130	SM00316	Ribosomal protein S1-like RNA-binding domain
BSS2_RS00155	SM00493	BSS2_RS00155
BSS2_RS00165	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS00320	SM00481	DNA polymerase alpha chain like domain
BSS2_RS00400	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS00435	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS00470	SM00448	cheY-homologous receiver domain
BSS2_RS00515	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS00520	SM01068	Putative carbohydrate binding domain
BSS2_RS00565	SM00474	3'-5' exonuclease
BSS2_RS00575	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
BSS2_RS00575	SM00474	3'-5' exonuclease
BSS2_RS00575	SM00475	5'-3' exonuclease
BSS2_RS00575	SM00479	BSS2_RS00575
BSS2_RS00575	SM00482	DNA polymerase A domain
BSS2_RS00580	SM00487	DEAD-like helicases superfamily
BSS2_RS00580	SM00490	helicase superfamily c-terminal domain
BSS2_RS00585	SM00387	Histidine kinase-like ATPases
BSS2_RS00585	SM00433	TopoisomeraseII
BSS2_RS00615	SM00487	DEAD-like helicases superfamily
BSS2_RS00615	SM00490	helicase superfamily c-terminal domain
BSS2_RS00615	SM00847	Helicase associated domain (HA2)  Add an annotation
BSS2_RS00625	SM00387	Histidine kinase-like ATPases
BSS2_RS00625	SM00388	His Kinase A (phosphoacceptor) domain
BSS2_RS00640	SM00448	cheY-homologous receiver domain
BSS2_RS00655	SM00932	Scaffold protein Nfu/NifU N terminal
BSS2_RS00675	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BSS2_RS00690	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
BSS2_RS00690	SM00534	ATPase domain of DNA mismatch repair MUTS family
BSS2_RS00705	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BSS2_RS00720	SM00411	bacterial (prokaryotic) histone like domain
BSS2_RS00740	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS00775	SM00478	endonuclease III
BSS2_RS00775	SM00525	BSS2_RS00775
BSS2_RS00820	SM00729	Elongator protein 3, MiaB family, Radical SAM
BSS2_RS00860	SM00886	Stress responsive A/B Barrel Domain
BSS2_RS00880	SM01018	B12 binding domain
BSS2_RS00885	SM00421	helix_turn_helix, Lux Regulon
BSS2_RS00915	SM00419	helix_turn_helix, cAMP Regulatory protein
BSS2_RS00920	SM00421	helix_turn_helix, Lux Regulon
BSS2_RS00925	SM00420	helix_turn_helix, Deoxyribose operon repressor
BSS2_RS00925	SM01134	BSS2_RS00925
BSS2_RS00945	SM00829	Enoylreductase
BSS2_RS01015	SM00052	Putative diguanylate phosphodiesterase
BSS2_RS01015	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BSS2_RS01015	SM00091	PAS domain
BSS2_RS01015	SM00267	diguanylate cyclase
BSS2_RS01025	SM00422	helix_turn_helix, mercury resistance
BSS2_RS01035	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS01055	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BSS2_RS01085	SM00346	helix_turn_helix isocitrate lyase regulation
BSS2_RS01105	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS01110	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BSS2_RS01140	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BSS2_RS01170	SM00316	Ribosomal protein S1-like RNA-binding domain
BSS2_RS01175	SM00226	Low molecular weight phosphatase family
BSS2_RS01215	SM01040	BRO family, N-terminal domain
BSS2_RS01220	SM00857	Resolvase, N terminal domain
BSS2_RS01265	SM00988	UreE urease accessory protein, N-terminal domain
BSS2_RS01285	SM00387	Histidine kinase-like ATPases
BSS2_RS01380	SM00062	Bacterial periplasmic substrate-binding proteins
BSS2_RS01395	SM00387	Histidine kinase-like ATPases
BSS2_RS01395	SM00388	His Kinase A (phosphoacceptor) domain
BSS2_RS01440	SM00342	helix_turn_helix, arabinose operon control protein
BSS2_RS01480	SM00421	helix_turn_helix, Lux Regulon
BSS2_RS01480	SM00448	cheY-homologous receiver domain
BSS2_RS01485	SM00387	Histidine kinase-like ATPases
BSS2_RS01485	SM00388	His Kinase A (phosphoacceptor) domain
BSS2_RS01485	SM00448	cheY-homologous receiver domain
BSS2_RS01585	SM00421	helix_turn_helix, Lux Regulon
BSS2_RS01585	SM00448	cheY-homologous receiver domain
BSS2_RS01620	SM01092	CO dehydrogenase flavoprotein C-terminal domain
BSS2_RS01625	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
BSS2_RS01710	SM00342	helix_turn_helix, arabinose operon control protein
BSS2_RS01795	SM00729	Elongator protein 3, MiaB family, Radical SAM
BSS2_RS01850	SM00028	Tetratricopeptide repeats
BSS2_RS01905	SM00267	diguanylate cyclase
BSS2_RS01910	SM01209	BSS2_RS01910
BSS2_RS01910	SM01210	BSS2_RS01910
BSS2_RS01930	SM00271	DnaJ molecular chaperone homology domain
BSS2_RS01945	SM00357	Cold shock protein domain
BSS2_RS02010	SM00861	Transketolase, pyrimidine binding domain
BSS2_RS02015	SM00363	S4 RNA-binding domain
BSS2_RS02035	SM00257	Lysin motif
BSS2_RS02040	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS02070	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS02075	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS02105	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BSS2_RS02110	SM00822	BSS2_RS02110
BSS2_RS02115	SM00823	Phosphopantetheine attachment site
BSS2_RS02120	SM00825	Beta-ketoacyl synthase
BSS2_RS02135	SM00072	Guanylate kinase homologues.
BSS2_RS02220	SM00052	Putative diguanylate phosphodiesterase
BSS2_RS02220	SM00267	diguanylate cyclase
BSS2_RS02245	SM00052	Putative diguanylate phosphodiesterase
BSS2_RS02275	SM00478	endonuclease III
BSS2_RS02275	SM00525	BSS2_RS02275
BSS2_RS02290	SM00968	SMC proteins Flexible Hinge Domain
BSS2_RS02325	SM00849	Metallo-beta-lactamase superfamily
BSS2_RS02400	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS02495	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS02530	SM00354	helix_turn _helix lactose operon repressor
BSS2_RS02535	SM00342	helix_turn_helix, arabinose operon control protein
BSS2_RS02570	SM00966	SpoVT / AbrB like domain 
BSS2_RS02580	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BSS2_RS02580	SM00895	BSS2_RS02580
BSS2_RS02635	SM00760	Bacterial dnaA protein helix-turn-helix domain
BSS2_RS02660	SM00387	Histidine kinase-like ATPases
BSS2_RS02660	SM00388	His Kinase A (phosphoacceptor) domain
BSS2_RS02790	SM00448	cheY-homologous receiver domain
BSS2_RS02790	SM00862	Transcriptional regulatory protein, C terminal
BSS2_RS02795	SM00387	Histidine kinase-like ATPases
BSS2_RS02825	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BSS2_RS02830	SM00448	cheY-homologous receiver domain
BSS2_RS02830	SM00862	Transcriptional regulatory protein, C terminal
BSS2_RS02835	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BSS2_RS02835	SM00387	Histidine kinase-like ATPases
BSS2_RS02835	SM00388	His Kinase A (phosphoacceptor) domain
BSS2_RS02850	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BSS2_RS02850	SM00387	Histidine kinase-like ATPases
BSS2_RS02850	SM00388	His Kinase A (phosphoacceptor) domain
BSS2_RS02870	SM00986	Uracil DNA glycosylase superfamily
BSS2_RS02870	SM00987	UreE urease accessory protein, C-terminal domain 
BSS2_RS02980	SM01130	BSS2_RS02980
BSS2_RS02990	SM00986	Uracil DNA glycosylase superfamily
BSS2_RS02990	SM00987	UreE urease accessory protein, C-terminal domain 
BSS2_RS03000	SM01409	BSS2_RS03000
BSS2_RS03005	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BSS2_RS03005	SM00954	Region found in RelA / SpoT proteins
BSS2_RS03015	SM00100	Cyclic nucleotide-monophosphate binding domain
BSS2_RS03015	SM00419	helix_turn_helix, cAMP Regulatory protein
BSS2_RS03020	SM00729	Elongator protein 3, MiaB family, Radical SAM
BSS2_RS03030	SM00342	helix_turn_helix, arabinose operon control protein
BSS2_RS03050	SM00358	Double-stranded RNA binding motif
BSS2_RS03050	SM00535	Ribonuclease III family
BSS2_RS03125	SM00917	LeuA allosteric (dimerisation) domain
BSS2_RS03140	SM00650	Ribosomal RNA adenine dimethylases
BSS2_RS03185	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS03195	SM00562	BSS2_RS03195
BSS2_RS03220	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BSS2_RS03220	SM00465	GIY-YIG type nucleases (URI domain)
BSS2_RS03260	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BSS2_RS03335	SM00479	BSS2_RS03335
BSS2_RS03350	SM00530	Helix-turn-helix XRE-family like proteins 
BSS2_RS03355	SM00530	Helix-turn-helix XRE-family like proteins 
BSS2_RS03405	SM00287	Bacterial SH3 domain homologues
BSS2_RS03420	SM00014	Acid phosphatase homologues
BSS2_RS03425	SM00062	Bacterial periplasmic substrate-binding proteins
BSS2_RS03440	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS03465	SM00341	Helicase and RNase D C-terminal
BSS2_RS03465	SM00474	3'-5' exonuclease
BSS2_RS03480	SM00434	DNA Topoisomerase IV
BSS2_RS03495	SM01004	Delta-aminolevulinic acid dehydratase
BSS2_RS03510	SM00347	helix_turn_helix multiple antibiotic resistance protein
BSS2_RS03580	SM00411	bacterial (prokaryotic) histone like domain
BSS2_RS03585	SM00422	helix_turn_helix, mercury resistance
BSS2_RS03630	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BSS2_RS03730	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
BSS2_RS03735	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
BSS2_RS03780	SM00849	Metallo-beta-lactamase superfamily
BSS2_RS03805	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS03810	SM00481	DNA polymerase alpha chain like domain
BSS2_RS03830	SM00363	S4 RNA-binding domain
BSS2_RS03830	SM01390	BSS2_RS03830
BSS2_RS03875	SM01211	BSS2_RS03875
BSS2_RS03910	SM00998	Adenylosuccinate lyase C-terminus
BSS2_RS03925	SM00829	Enoylreductase
BSS2_RS03930	SM00825	Beta-ketoacyl synthase
BSS2_RS04005	SM00344	helix_turn_helix ASNC type
BSS2_RS04010	SM00986	Uracil DNA glycosylase superfamily
BSS2_RS04010	SM00987	UreE urease accessory protein, C-terminal domain 
BSS2_RS04015	SM00318	Staphylococcal nuclease homologues
BSS2_RS04020	SM00671	Sel1-like repeats.
BSS2_RS04040	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BSS2_RS04045	SM00836	DALR anticodon binding domain
BSS2_RS04045	SM01016	Arginyl tRNA synthetase N terminal dom
BSS2_RS04105	SM00257	Lysin motif
BSS2_RS04115	SM01323	BSS2_RS04115
BSS2_RS04165	SM00845	GatB domain
BSS2_RS04190	SM00878	Biotin carboxylase C-terminal domain
BSS2_RS04230	SM00646	BSS2_RS04230
BSS2_RS04240	SM00937	BSS2_RS04240
BSS2_RS04300	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS04335	SM00487	DEAD-like helicases superfamily
BSS2_RS04335	SM00490	helicase superfamily c-terminal domain
BSS2_RS04405	SM00062	Bacterial periplasmic substrate-binding proteins
BSS2_RS04405	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BSS2_RS04420	SM00729	Elongator protein 3, MiaB family, Radical SAM
BSS2_RS04590	SM00936	Penicillin-binding protein 5, C-terminal domain 
BSS2_RS04615	SM00849	Metallo-beta-lactamase superfamily
BSS2_RS04620	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS04645	SM01230	BSS2_RS04645
BSS2_RS04650	SM00938	Nitrogen regulatory protein P-II
BSS2_RS04710	SM00919	Malic enzyme, NAD binding domain
BSS2_RS04710	SM01274	BSS2_RS04710
BSS2_RS04715	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BSS2_RS04725	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS04765	SM00905	Dihydroneopterin aldolase
BSS2_RS04805	SM00091	PAS domain
BSS2_RS04805	SM00387	Histidine kinase-like ATPases
BSS2_RS04805	SM00388	His Kinase A (phosphoacceptor) domain
BSS2_RS04805	SM00448	cheY-homologous receiver domain
BSS2_RS04845	SM00852	Probable molybdopterin binding domain
BSS2_RS04865	SM00487	DEAD-like helicases superfamily
BSS2_RS04865	SM00490	helicase superfamily c-terminal domain
BSS2_RS04875	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BSS2_RS04880	SM00450	Rhodanese Homology Domain
BSS2_RS04890	SM00267	diguanylate cyclase
BSS2_RS04920	SM00028	Tetratricopeptide repeats
BSS2_RS04940	SM00903	Flavin reductase like domain
BSS2_RS04955	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BSS2_RS04965	SM01234	BSS2_RS04965
BSS2_RS05015	SM00857	Resolvase, N terminal domain
BSS2_RS05020	SM01040	BRO family, N-terminal domain
BSS2_RS05095	SM00434	DNA Topoisomerase IV
BSS2_RS05105	SM00072	Guanylate kinase homologues.
BSS2_RS05110	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BSS2_RS05110	SM00866	BSS2_RS05110
BSS2_RS05125	SM00411	bacterial (prokaryotic) histone like domain
BSS2_RS05130	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS05130	SM00464	Found in ATP-dependent protease La (LON)
BSS2_RS05135	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS05135	SM00994	ClpX C4-type zinc finger
BSS2_RS05135	SM01086	C-terminal, D2-small domain, of ClpB protein
BSS2_RS05165	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS05165	SM00448	cheY-homologous receiver domain
BSS2_RS05170	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BSS2_RS05170	SM00387	Histidine kinase-like ATPases
BSS2_RS05170	SM00388	His Kinase A (phosphoacceptor) domain
BSS2_RS05175	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS05175	SM00448	cheY-homologous receiver domain
BSS2_RS05180	SM00387	Histidine kinase-like ATPases
BSS2_RS05180	SM00388	His Kinase A (phosphoacceptor) domain
BSS2_RS05200	SM00822	BSS2_RS05200
BSS2_RS05210	SM00729	Elongator protein 3, MiaB family, Radical SAM
BSS2_RS05230	SM00861	Transketolase, pyrimidine binding domain
BSS2_RS05250	SM01192	BSS2_RS05250
BSS2_RS05250	SM01193	BSS2_RS05250
BSS2_RS05300	SM00852	Probable molybdopterin binding domain
BSS2_RS05355	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BSS2_RS05420	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS05420	SM01086	C-terminal, D2-small domain, of ClpB protein
BSS2_RS05460	SM00422	helix_turn_helix, mercury resistance
BSS2_RS05495	SM00530	Helix-turn-helix XRE-family like proteins 
BSS2_RS05505	SM00878	Biotin carboxylase C-terminal domain
BSS2_RS05550	SM01329	BSS2_RS05550
BSS2_RS05555	SM00098	Alkaline phosphatase homologues
BSS2_RS05560	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BSS2_RS05565	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS05580	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS05585	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BSS2_RS05595	SM00662	RNA polymerases D
BSS2_RS05660	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BSS2_RS05665	SM01374	BSS2_RS05665
BSS2_RS05685	SM00322	K homology RNA-binding domain
BSS2_RS05700	SM01382	BSS2_RS05700
BSS2_RS05700	SM01383	BSS2_RS05700
BSS2_RS05720	SM01403	BSS2_RS05720
BSS2_RS05730	SM00838	Elongation factor G C-terminus
BSS2_RS05730	SM00889	Elongation factor G, domain IV
BSS2_RS05750	SM00663	RNA polymerase I subunit A N-terminus
BSS2_RS05775	SM00649	Ribosomal protein L11/L12
BSS2_RS05780	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
BSS2_RS05780	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BSS2_RS05810	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BSS2_RS05815	SM00116	Domain in cystathionine beta-synthase and other proteins.
BSS2_RS05845	SM00971	Serine acetyltransferase, N-terminal
BSS2_RS05860	SM00357	Cold shock protein domain
BSS2_RS05870	SM00978	BSS2_RS05870
BSS2_RS05980	SM00903	Flavin reductase like domain
BSS2_RS06055	SM00833	Cobalamin synthesis protein cobW C-terminal domain
BSS2_RS06105	SM00342	helix_turn_helix, arabinose operon control protein
BSS2_RS06175	SM01091	Transporter associated domain
BSS2_RS06200	SM00822	BSS2_RS06200
BSS2_RS06205	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS06225	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS06250	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS06280	SM00988	UreE urease accessory protein, N-terminal domain
BSS2_RS06325	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS06435	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BSS2_RS06445	SM00244	prohibitin homologues
BSS2_RS06450	SM00244	prohibitin homologues
BSS2_RS06560	SM00292	breast cancer carboxy-terminal domain
BSS2_RS06560	SM00532	Ligase N family
BSS2_RS06580	SM00864	Tubulin/FtsZ family, GTPase domain
BSS2_RS06580	SM00865	Tubulin/FtsZ family, C-terminal domain
BSS2_RS06585	SM00842	Cell division protein FtsA
BSS2_RS06670	SM00644	BSS2_RS06670
BSS2_RS06675	SM00271	DnaJ molecular chaperone homology domain
BSS2_RS06685	SM00641	Glycosyl hydrolases family 25
BSS2_RS06705	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BSS2_RS06725	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS06845	SM00400	zinc finger
BSS2_RS06845	SM00493	BSS2_RS06845
BSS2_RS06860	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
BSS2_RS06875	SM00850	LytTr DNA-binding domain
BSS2_RS06880	SM00851	MGS-like domain
BSS2_RS06880	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
BSS2_RS06895	SM00357	Cold shock protein domain
BSS2_RS06925	SM00344	helix_turn_helix ASNC type
BSS2_RS06965	SM00287	Bacterial SH3 domain homologues
BSS2_RS06970	SM00487	DEAD-like helicases superfamily
BSS2_RS06970	SM00490	helicase superfamily c-terminal domain
BSS2_RS06980	SM00357	Cold shock protein domain
BSS2_RS06995	SM00849	Metallo-beta-lactamase superfamily
BSS2_RS07010	SM00347	helix_turn_helix multiple antibiotic resistance protein
BSS2_RS07015	SM00448	cheY-homologous receiver domain
BSS2_RS07015	SM00862	Transcriptional regulatory protein, C terminal
BSS2_RS07020	SM00387	Histidine kinase-like ATPases
BSS2_RS07070	SM01400	BSS2_RS07070
BSS2_RS07125	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS07230	SM00917	LeuA allosteric (dimerisation) domain
BSS2_RS07250	SM00344	helix_turn_helix ASNC type
BSS2_RS07255	SM00347	helix_turn_helix multiple antibiotic resistance protein
BSS2_RS07285	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS07290	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS07295	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS07325	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BSS2_RS07370	SM00448	cheY-homologous receiver domain
BSS2_RS07370	SM00862	Transcriptional regulatory protein, C terminal
BSS2_RS07405	SM00091	PAS domain
BSS2_RS07405	SM00387	Histidine kinase-like ATPases
BSS2_RS07405	SM00388	His Kinase A (phosphoacceptor) domain
BSS2_RS07425	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS07435	SM00530	Helix-turn-helix XRE-family like proteins 
BSS2_RS07490	SM01120	BSS2_RS07490
BSS2_RS07500	SM01120	BSS2_RS07500
BSS2_RS07525	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS07575	SM00346	helix_turn_helix isocitrate lyase regulation
BSS2_RS07595	SM00507	HNH nucleases
BSS2_RS07600	SM00478	endonuclease III
BSS2_RS07625	SM00363	S4 RNA-binding domain
BSS2_RS07645	SM00911	HWE histidine kinase
BSS2_RS07655	SM00448	cheY-homologous receiver domain
BSS2_RS07670	SM00387	Histidine kinase-like ATPases
BSS2_RS07725	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS07750	SM00344	helix_turn_helix ASNC type
BSS2_RS07780	SM00788	Adenylosuccinate synthetase
BSS2_RS07815	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS07865	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS07870	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BSS2_RS07895	SM00671	Sel1-like repeats.
BSS2_RS07900	SM00841	Elongation factor P, C-terminal
BSS2_RS07900	SM01185	BSS2_RS07900
BSS2_RS07920	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS07975	SM00861	Transketolase, pyrimidine binding domain
BSS2_RS07980	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BSS2_RS08020	SM00829	Enoylreductase
BSS2_RS08045	SM01001	AIR carboxylase
BSS2_RS08060	SM00028	Tetratricopeptide repeats
BSS2_RS08085	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS08095	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
BSS2_RS08110	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS08130	SM01058	CarD-like/TRCF domain
BSS2_RS08140	SM00363	S4 RNA-binding domain
BSS2_RS08190	SM00878	Biotin carboxylase C-terminal domain
BSS2_RS08215	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS08240	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BSS2_RS08240	SM00895	BSS2_RS08240
BSS2_RS08245	SM00347	helix_turn_helix multiple antibiotic resistance protein
BSS2_RS08255	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS08280	SM00487	DEAD-like helicases superfamily
BSS2_RS08280	SM00490	helicase superfamily c-terminal domain
BSS2_RS08340	SM00798	AICARFT/IMPCHase bienzyme
BSS2_RS08340	SM00851	MGS-like domain
BSS2_RS08375	SM00830	Chorismate mutase type II
BSS2_RS08380	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS08380	SM00962	SRP54-type protein, GTPase domain
BSS2_RS08380	SM00963	SRP54-type protein, helical bundle domain
BSS2_RS08390	SM00947	Carbonic anhydrase
BSS2_RS08430	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BSS2_RS08430	SM00245	tail specific protease
BSS2_RS08465	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
BSS2_RS08510	SM00530	Helix-turn-helix XRE-family like proteins 
BSS2_RS08575	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS08575	SM01086	C-terminal, D2-small domain, of ClpB protein
BSS2_RS08590	SM00937	BSS2_RS08590
BSS2_RS08595	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BSS2_RS08705	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS08705	SM00843	BSS2_RS08705
BSS2_RS08790	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BSS2_RS08840	SM00861	Transketolase, pyrimidine binding domain
BSS2_RS08845	SM00881	CoA binding domain
BSS2_RS08875	SM00729	Elongator protein 3, MiaB family, Radical SAM
BSS2_RS08880	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS08880	SM00962	SRP54-type protein, GTPase domain
BSS2_RS08880	SM00963	SRP54-type protein, helical bundle domain
BSS2_RS08890	SM00849	Metallo-beta-lactamase superfamily
BSS2_RS08925	SM00957	SecA DEAD-like domain
BSS2_RS08925	SM00958	SecA preprotein cross-linking domain
BSS2_RS08960	SM00062	Bacterial periplasmic substrate-binding proteins
BSS2_RS08975	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS08990	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS08995	SM00870	BSS2_RS08995
BSS2_RS09000	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BSS2_RS09000	SM00895	BSS2_RS09000
BSS2_RS09005	SM00870	BSS2_RS09005
BSS2_RS09040	SM00893	Electron transfer flavoprotein domain
BSS2_RS09045	SM00893	Electron transfer flavoprotein domain
BSS2_RS09160	SM00563	Phosphate acyltransferases
BSS2_RS09175	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS09200	SM00100	Cyclic nucleotide-monophosphate binding domain
BSS2_RS09205	SM00448	cheY-homologous receiver domain
BSS2_RS09205	SM00862	Transcriptional regulatory protein, C terminal
BSS2_RS09240	SM00869	Autotransporter beta-domain
BSS2_RS09260	SM00422	helix_turn_helix, mercury resistance
BSS2_RS09280	SM00327	von Willebrand factor (vWF) type A domain
BSS2_RS09290	SM00271	DnaJ molecular chaperone homology domain
BSS2_RS09300	SM00116	Domain in cystathionine beta-synthase and other proteins.
BSS2_RS09300	SM01091	Transporter associated domain
BSS2_RS09340	SM00833	Cobalamin synthesis protein cobW C-terminal domain
BSS2_RS09400	SM00882	Coenzyme A transferase
BSS2_RS09410	SM00354	helix_turn _helix lactose operon repressor
BSS2_RS09435	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS09445	SM00470	ParB-like nuclease domain
BSS2_RS09460	SM01228	BSS2_RS09460
BSS2_RS09475	SM00357	Cold shock protein domain
BSS2_RS09475	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS09475	SM00959	Rho termination factor, N-terminal domain
BSS2_RS09515	SM00479	BSS2_RS09515
BSS2_RS09530	SM00978	BSS2_RS09530
BSS2_RS09535	SM00925	MltA specific insert domain
BSS2_RS09540	SM00463	Small MutS-related domain
BSS2_RS09545	SM00530	Helix-turn-helix XRE-family like proteins 
BSS2_RS09555	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS09555	SM01086	C-terminal, D2-small domain, of ClpB protein
BSS2_RS09610	SM00448	cheY-homologous receiver domain
BSS2_RS09610	SM00862	Transcriptional regulatory protein, C terminal
BSS2_RS09615	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BSS2_RS09615	SM00387	Histidine kinase-like ATPases
BSS2_RS09615	SM00388	His Kinase A (phosphoacceptor) domain
BSS2_RS09635	SM00996	S-adenosyl-L-homocysteine hydrolase
BSS2_RS09635	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
BSS2_RS09640	SM00387	Histidine kinase-like ATPases
BSS2_RS09640	SM00388	His Kinase A (phosphoacceptor) domain
BSS2_RS09760	SM00873	B3/4 domain
BSS2_RS09760	SM00874	tRNA synthetase B5 domain
BSS2_RS09760	SM00896	Ferredoxin-fold anticodon binding domain
BSS2_RS09775	SM00271	DnaJ molecular chaperone homology domain
BSS2_RS09780	SM00650	Ribosomal RNA adenine dimethylases
BSS2_RS09785	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
BSS2_RS09805	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS09840	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS09850	SM00448	cheY-homologous receiver domain
BSS2_RS09850	SM00862	Transcriptional regulatory protein, C terminal
BSS2_RS09885	SM00563	Phosphate acyltransferases
BSS2_RS09890	SM00729	Elongator protein 3, MiaB family, Radical SAM
BSS2_RS09905	SM01091	Transporter associated domain
BSS2_RS09915	SM00530	Helix-turn-helix XRE-family like proteins 
BSS2_RS09935	SM00316	Ribosomal protein S1-like RNA-binding domain
BSS2_RS09935	SM00322	K homology RNA-binding domain
BSS2_RS09960	SM01387	BSS2_RS09960
BSS2_RS09965	SM00316	Ribosomal protein S1-like RNA-binding domain
BSS2_RS09965	SM00322	K homology RNA-binding domain
BSS2_RS09980	SM00825	Beta-ketoacyl synthase
BSS2_RS10000	SM00287	Bacterial SH3 domain homologues
BSS2_RS10020	SM00347	helix_turn_helix multiple antibiotic resistance protein
BSS2_RS10035	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
BSS2_RS10035	SM01232	BSS2_RS10035
BSS2_RS10160	SM00878	Biotin carboxylase C-terminal domain
BSS2_RS10220	SM00316	Ribosomal protein S1-like RNA-binding domain
BSS2_RS15190	SM00382	ATPases associated with a variety of cellular activities
BSS2_RS15450	SM00382	ATPases associated with a variety of cellular activities
