BUMPUSDA_RS00005 PF01134 Glucose inhibited division protein A BUMPUSDA_RS00005 PF13932 GidA associated domain 3 BUMPUSDA_RS00010 PF00119 ATP synthase A chain BUMPUSDA_RS00015 PF00137 ATP synthase subunit C BUMPUSDA_RS00020 PF00430 ATP synthase B/B' CF(0) BUMPUSDA_RS00025 PF00213 ATP synthase delta (OSCP) subunit BUMPUSDA_RS00030 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BUMPUSDA_RS00030 PF00306 ATP synthase alpha/beta chain, C terminal domain BUMPUSDA_RS00030 PF02874 ATP synthase alpha/beta family, beta-barrel domain BUMPUSDA_RS00035 PF00231 ATP synthase BUMPUSDA_RS00040 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BUMPUSDA_RS00040 PF02874 ATP synthase alpha/beta family, beta-barrel domain BUMPUSDA_RS00045 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BUMPUSDA_RS00050 PF00204 DNA gyrase B BUMPUSDA_RS00050 PF00986 DNA gyrase B subunit, carboxyl terminus BUMPUSDA_RS00050 PF01751 Toprim domain BUMPUSDA_RS00050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BUMPUSDA_RS00055 PF00712 DNA polymerase III beta subunit, N-terminal domain BUMPUSDA_RS00055 PF02767 DNA polymerase III beta subunit, central domain BUMPUSDA_RS00055 PF02768 DNA polymerase III beta subunit, C-terminal domain BUMPUSDA_RS00060 PF00308 Bacterial dnaA protein BUMPUSDA_RS00060 PF08299 Bacterial dnaA protein helix-turn-helix BUMPUSDA_RS00060 PF11638 DnaA N-terminal domain BUMPUSDA_RS00065 PF00468 Ribosomal protein L34 BUMPUSDA_RS00070 PF00825 Ribonuclease P BUMPUSDA_RS00075 PF02096 60Kd inner membrane protein BUMPUSDA_RS00075 PF14849 YidC periplasmic domain BUMPUSDA_RS00080 PF01926 50S ribosome-binding GTPase BUMPUSDA_RS00080 PF10396 GTP-binding protein TrmE N-terminus BUMPUSDA_RS00080 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE BUMPUSDA_RS00090 PF00166 Chaperonin 10 Kd subunit BUMPUSDA_RS00095 PF00118 TCP-1/cpn60 chaperonin family BUMPUSDA_RS00100 PF13394 4Fe-4S single cluster domain BUMPUSDA_RS00105 PF01132 Elongation factor P (EF-P) OB domain BUMPUSDA_RS00105 PF08207 Elongation factor P (EF-P) KOW-like domain BUMPUSDA_RS00105 PF09285 Elongation factor P, C-terminal BUMPUSDA_RS00110 PF01695 IstB-like ATP binding protein BUMPUSDA_RS00120 PF03602 Conserved hypothetical protein 95 BUMPUSDA_RS00125 PF00448 SRP54-type protein, GTPase domain BUMPUSDA_RS00125 PF02881 SRP54-type protein, helical bundle domain BUMPUSDA_RS00130 PF04542 Sigma-70 region 2 BUMPUSDA_RS00130 PF04545 Sigma-70, region 4 BUMPUSDA_RS00135 PF01380 SIS domain BUMPUSDA_RS00135 PF13522 Glutamine amidotransferase domain BUMPUSDA_RS00140 PF00132 Bacterial transferase hexapeptide (six repeats) BUMPUSDA_RS00140 PF12804 MobA-like NTP transferase domain BUMPUSDA_RS00145 PF08282 haloacid dehalogenase-like hydrolase BUMPUSDA_RS00150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BUMPUSDA_RS00150 PF03466 LysR substrate binding domain BUMPUSDA_RS00155 PF01717 Cobalamin-independent synthase, Catalytic domain BUMPUSDA_RS00155 PF08267 Cobalamin-independent synthase, N-terminal domain BUMPUSDA_RS00160 PF01808 AICARFT/IMPCHase bienzyme BUMPUSDA_RS00160 PF02142 MGS-like domain BUMPUSDA_RS00165 PF00216 Bacterial DNA-binding protein BUMPUSDA_RS00170 PF00623 RNA polymerase Rpb1, domain 2 BUMPUSDA_RS00170 PF04983 RNA polymerase Rpb1, domain 3 BUMPUSDA_RS00170 PF04997 RNA polymerase Rpb1, domain 1 BUMPUSDA_RS00170 PF04998 RNA polymerase Rpb1, domain 5 BUMPUSDA_RS00170 PF05000 RNA polymerase Rpb1, domain 4 BUMPUSDA_RS00175 PF00562 RNA polymerase Rpb2, domain 6 BUMPUSDA_RS00175 PF04560 RNA polymerase Rpb2, domain 7 BUMPUSDA_RS00175 PF04561 RNA polymerase Rpb2, domain 2 BUMPUSDA_RS00175 PF04563 RNA polymerase beta subunit BUMPUSDA_RS00175 PF04565 RNA polymerase Rpb2, domain 3 BUMPUSDA_RS00175 PF10385 RNA polymerase beta subunit external 1 domain BUMPUSDA_RS00180 PF00542 Ribosomal protein L7/L12 C-terminal domain BUMPUSDA_RS00180 PF16320 BUMPUSDA_RS00180 BUMPUSDA_RS00185 PF00466 Ribosomal protein L10 BUMPUSDA_RS00190 PF00687 Ribosomal protein L1p/L10e family BUMPUSDA_RS00195 PF00298 Ribosomal protein L11, RNA binding domain BUMPUSDA_RS00195 PF03946 Ribosomal protein L11, N-terminal domain BUMPUSDA_RS00200 PF00467 KOW motif BUMPUSDA_RS00200 PF02357 Transcription termination factor nusG BUMPUSDA_RS00205 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BUMPUSDA_RS00230 PF01565 FAD binding domain BUMPUSDA_RS00230 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BUMPUSDA_RS00235 PF02219 Methylenetetrahydrofolate reductase BUMPUSDA_RS00240 PF01546 Peptidase family M20/M25/M40 BUMPUSDA_RS00240 PF07687 Peptidase dimerisation domain BUMPUSDA_RS00245 PF01118 Semialdehyde dehydrogenase, NAD binding domain BUMPUSDA_RS00245 PF02774 Semialdehyde dehydrogenase, dimerisation domain BUMPUSDA_RS00250 PF00696 Amino acid kinase family BUMPUSDA_RS00255 PF00764 Arginosuccinate synthase BUMPUSDA_RS00260 PF00206 Lyase BUMPUSDA_RS00260 PF14698 Argininosuccinate lyase C-terminal BUMPUSDA_RS00265 PF00581 Rhodanese-like domain BUMPUSDA_RS00270 PF02556 Preprotein translocase subunit SecB BUMPUSDA_RS00275 PF00132 Bacterial transferase hexapeptide (six repeats) BUMPUSDA_RS00275 PF06426 Serine acetyltransferase, N-terminal BUMPUSDA_RS00280 PF00140 Sigma-70 factor, region 1 BUMPUSDA_RS00280 PF03979 Sigma-70 factor, region 1 BUMPUSDA_RS00280 PF04539 Sigma-70 region 3 BUMPUSDA_RS00280 PF04542 Sigma-70 region 2 BUMPUSDA_RS00280 PF04545 Sigma-70, region 4 BUMPUSDA_RS00280 PF04546 Sigma-70, non-essential region BUMPUSDA_RS00285 PF01807 CHC2 zinc finger BUMPUSDA_RS00285 PF08275 DNA primase catalytic core, N-terminal domain BUMPUSDA_RS00285 PF08278 DNA primase DnaG DnaB-binding BUMPUSDA_RS00285 PF10410 DnaB-helicase binding domain of primase BUMPUSDA_RS00285 PF13155 Toprim-like BUMPUSDA_RS00290 PF01165 Ribosomal protein S21 BUMPUSDA_RS00295 PF00814 Glycoprotease family BUMPUSDA_RS00300 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BUMPUSDA_RS00305 PF00294 pfkB family carbohydrate kinase BUMPUSDA_RS00310 PF01743 Poly A polymerase head domain BUMPUSDA_RS00310 PF12627 Probable RNA and SrmB- binding site of polymerase A BUMPUSDA_RS00315 PF02673 BUMPUSDA_RS00315 BUMPUSDA_RS00320 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BUMPUSDA_RS00325 PF00391 PEP-utilising enzyme, mobile domain BUMPUSDA_RS00325 PF02896 PEP-utilising enzyme, TIM barrel domain BUMPUSDA_RS00325 PF05524 PEP-utilising enzyme, N-terminal BUMPUSDA_RS00330 PF00381 PTS HPr component phosphorylation site BUMPUSDA_RS00335 PF00291 Pyridoxal-phosphate dependent enzyme BUMPUSDA_RS00340 PF00533 BRCA1 C Terminus (BRCT) domain BUMPUSDA_RS00340 PF01653 NAD-dependent DNA ligase adenylation domain BUMPUSDA_RS00340 PF03120 NAD-dependent DNA ligase OB-fold domain BUMPUSDA_RS00340 PF12826 Helix-hairpin-helix motif BUMPUSDA_RS00355 PF00749 tRNA synthetases class I (E and Q), catalytic domain BUMPUSDA_RS00365 PF02049 BUMPUSDA_RS00365 BUMPUSDA_RS00370 PF01514 Secretory protein of YscJ/FliF family BUMPUSDA_RS00370 PF08345 BUMPUSDA_RS00370 BUMPUSDA_RS00375 PF01706 FliG C-terminal domain BUMPUSDA_RS00375 PF14841 FliG middle domain BUMPUSDA_RS00375 PF14842 FliG N-terminal domain BUMPUSDA_RS00380 PF02108 BUMPUSDA_RS00380 BUMPUSDA_RS00385 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BUMPUSDA_RS00390 PF02050 Flagellar FliJ protein BUMPUSDA_RS00400 PF02120 Flagellar hook-length control protein FliK BUMPUSDA_RS00410 PF01052 Surface presentation of antigens (SPOA) BUMPUSDA_RS00415 PF00813 BUMPUSDA_RS00415 BUMPUSDA_RS00420 PF01313 BUMPUSDA_RS00420 BUMPUSDA_RS00425 PF01311 BUMPUSDA_RS00425 BUMPUSDA_RS00430 PF00471 Ribosomal protein L33 BUMPUSDA_RS00435 PF00830 Ribosomal L28 family BUMPUSDA_RS00445 PF00719 Inorganic pyrophosphatase BUMPUSDA_RS00450 PF01523 Putative modulator of DNA gyrase BUMPUSDA_RS00455 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BUMPUSDA_RS00460 PF00109 Beta-ketoacyl synthase, N-terminal domain BUMPUSDA_RS00460 PF02801 Beta-ketoacyl synthase, C-terminal domain BUMPUSDA_RS00465 PF00923 Transaldolase BUMPUSDA_RS00470 PF00456 Transketolase, thiamine diphosphate binding domain BUMPUSDA_RS00470 PF02779 Transketolase, pyrimidine binding domain BUMPUSDA_RS00470 PF02780 Transketolase, C-terminal domain BUMPUSDA_RS00475 PF01546 Peptidase family M20/M25/M40 BUMPUSDA_RS00475 PF07687 Peptidase dimerisation domain BUMPUSDA_RS00480 PF00701 Dihydrodipicolinate synthetase family BUMPUSDA_RS00485 PF01264 Chorismate synthase BUMPUSDA_RS00490 PF01713 Smr domain BUMPUSDA_RS00495 PF01634 ATP phosphoribosyltransferase BUMPUSDA_RS00495 PF08029 HisG, C-terminal domain BUMPUSDA_RS00500 PF00815 Histidinol dehydrogenase BUMPUSDA_RS00505 PF00155 Aminotransferase class I and II BUMPUSDA_RS00510 PF00475 Imidazoleglycerol-phosphate dehydratase BUMPUSDA_RS00510 PF13242 HAD-hyrolase-like BUMPUSDA_RS00515 PF00117 Glutamine amidotransferase class-I BUMPUSDA_RS00520 PF00977 Histidine biosynthesis protein BUMPUSDA_RS00525 PF00977 Histidine biosynthesis protein BUMPUSDA_RS00530 PF01502 Phosphoribosyl-AMP cyclohydrolase BUMPUSDA_RS00530 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BUMPUSDA_RS00535 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BUMPUSDA_RS00535 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BUMPUSDA_RS00540 PF00692 dUTPase BUMPUSDA_RS00545 PF09334 tRNA synthetases class I (M) BUMPUSDA_RS00550 PF01171 PP-loop family BUMPUSDA_RS00550 PF09179 TilS substrate binding domain BUMPUSDA_RS00550 PF11734 TilS substrate C-terminal domain BUMPUSDA_RS00560 PF00677 Lumazine binding domain BUMPUSDA_RS00565 PF02508 BUMPUSDA_RS00565 BUMPUSDA_RS00570 PF04060 Putative Fe-S cluster BUMPUSDA_RS00570 PF14697 4Fe-4S dicluster domain BUMPUSDA_RS00575 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BUMPUSDA_RS00575 PF12838 4Fe-4S dicluster domain BUMPUSDA_RS00575 PF13375 RnfC Barrel sandwich hybrid domain BUMPUSDA_RS00580 PF03116 BUMPUSDA_RS00580 BUMPUSDA_RS00585 PF04205 FMN-binding domain BUMPUSDA_RS00590 PF02508 BUMPUSDA_RS00590 BUMPUSDA_RS00595 PF00633 Helix-hairpin-helix motif BUMPUSDA_RS00595 PF00730 HhH-GPD superfamily base excision DNA repair protein BUMPUSDA_RS00605 PF00579 tRNA synthetases class I (W and Y) BUMPUSDA_RS00610 PF01521 Iron-sulphur cluster biosynthesis BUMPUSDA_RS00615 PF01594 BUMPUSDA_RS00615 BUMPUSDA_RS00620 PF00793 DAHP synthetase I family BUMPUSDA_RS00625 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BUMPUSDA_RS00625 PF03129 Anticodon binding domain BUMPUSDA_RS00625 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BUMPUSDA_RS00630 PF00707 Translation initiation factor IF-3, C-terminal domain BUMPUSDA_RS00630 PF05198 Translation initiation factor IF-3, N-terminal domain BUMPUSDA_RS00635 PF01632 Ribosomal protein L35 BUMPUSDA_RS00640 PF00453 Ribosomal protein L20 BUMPUSDA_RS00645 PF01409 tRNA synthetases class II core domain (F) BUMPUSDA_RS00645 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BUMPUSDA_RS00650 PF01588 Putative tRNA binding domain BUMPUSDA_RS00650 PF03147 Ferredoxin-fold anticodon binding domain BUMPUSDA_RS00650 PF03483 B3/4 domain BUMPUSDA_RS00650 PF03484 tRNA synthetase B5 domain BUMPUSDA_RS00655 PF00216 Bacterial DNA-binding protein BUMPUSDA_RS00660 PF02547 Queuosine biosynthesis protein BUMPUSDA_RS00665 PF01702 Queuine tRNA-ribosyltransferase BUMPUSDA_RS00670 PF02699 Preprotein translocase subunit BUMPUSDA_RS00675 PF02092 BUMPUSDA_RS00675 BUMPUSDA_RS00675 PF05746 DALR anticodon binding domain BUMPUSDA_RS00680 PF02091 Glycyl-tRNA synthetase alpha subunit BUMPUSDA_RS00685 PF01227 GTP cyclohydrolase I BUMPUSDA_RS00690 PF01261 Xylose isomerase-like TIM barrel BUMPUSDA_RS00695 PF01386 Ribosomal L25p family BUMPUSDA_RS00700 PF09335 BUMPUSDA_RS00700 BUMPUSDA_RS00705 PF09312 SurA N-terminal domain BUMPUSDA_RS00705 PF13616 PPIC-type PPIASE domain BUMPUSDA_RS00710 PF00398 Ribosomal RNA adenine dimethylase BUMPUSDA_RS00715 PF00149 Calcineurin-like phosphoesterase BUMPUSDA_RS00720 PF00186 Dihydrofolate reductase BUMPUSDA_RS00725 PF02142 MGS-like domain BUMPUSDA_RS00725 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BUMPUSDA_RS00725 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BUMPUSDA_RS00730 PF00117 Glutamine amidotransferase class-I BUMPUSDA_RS00730 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BUMPUSDA_RS00735 PF01113 Dihydrodipicolinate reductase, N-terminus BUMPUSDA_RS00735 PF05173 Dihydrodipicolinate reductase, C-terminus BUMPUSDA_RS00740 PF02401 LytB protein BUMPUSDA_RS00745 PF01252 BUMPUSDA_RS00745 BUMPUSDA_RS00750 PF00133 tRNA synthetases class I (I, L, M and V) BUMPUSDA_RS00750 PF06827 Zinc finger found in FPG and IleRS BUMPUSDA_RS00750 PF08264 Anticodon-binding domain of tRNA BUMPUSDA_RS00755 PF01687 Riboflavin kinase BUMPUSDA_RS00755 PF06574 FAD synthetase BUMPUSDA_RS00760 PF01649 Ribosomal protein S20 BUMPUSDA_RS00765 PF00226 DnaJ domain BUMPUSDA_RS00765 PF00684 DnaJ central domain BUMPUSDA_RS00765 PF01556 DnaJ C terminal domain BUMPUSDA_RS00770 PF00012 Hsp70 protein BUMPUSDA_RS00775 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BUMPUSDA_RS00780 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BUMPUSDA_RS00785 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BUMPUSDA_RS00785 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BUMPUSDA_RS00790 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin BUMPUSDA_RS00795 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BUMPUSDA_RS00795 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BUMPUSDA_RS00800 PF00384 Molybdopterin oxidoreductase BUMPUSDA_RS00800 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BUMPUSDA_RS00800 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BUMPUSDA_RS00800 PF13510 2Fe-2S iron-sulfur cluster binding domain BUMPUSDA_RS00805 PF00146 NADH dehydrogenase BUMPUSDA_RS00810 PF12838 4Fe-4S dicluster domain BUMPUSDA_RS00815 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BUMPUSDA_RS00820 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BUMPUSDA_RS00825 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains BUMPUSDA_RS00825 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BUMPUSDA_RS00830 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains BUMPUSDA_RS00835 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains BUMPUSDA_RS00840 PF03741 BUMPUSDA_RS00840 BUMPUSDA_RS00845 PF08245 Mur ligase middle domain BUMPUSDA_RS00850 PF02674 BUMPUSDA_RS00850 BUMPUSDA_RS00855 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BUMPUSDA_RS00855 PF14572 Phosphoribosyl synthetase-associated domain BUMPUSDA_RS00860 PF00288 GHMP kinases N terminal domain BUMPUSDA_RS00865 PF00472 RF-1 domain BUMPUSDA_RS00865 PF03462 PCRF domain BUMPUSDA_RS00870 PF13847 Methyltransferase domain BUMPUSDA_RS00875 PF13369 BUMPUSDA_RS00875 BUMPUSDA_RS00875 PF13371 Tetratricopeptide repeat BUMPUSDA_RS00880 PF02540 NAD synthase BUMPUSDA_RS00885 PF00871 Acetokinase family BUMPUSDA_RS00890 PF01515 Phosphate acetyl/butaryl transferase BUMPUSDA_RS00890 PF13500 AAA domain BUMPUSDA_RS00895 PF00111 2Fe-2S iron-sulfur cluster binding domain BUMPUSDA_RS00900 PF00268 Ribonucleotide reductase, small chain BUMPUSDA_RS00905 PF00317 Ribonucleotide reductase, all-alpha domain BUMPUSDA_RS00905 PF02867 Ribonucleotide reductase, barrel domain BUMPUSDA_RS00905 PF03477 ATP cone domain BUMPUSDA_RS00910 PF00521 DNA gyrase/topoisomerase IV, subunit A BUMPUSDA_RS00910 PF03989 DNA gyrase C-terminal domain, beta-propeller BUMPUSDA_RS00915 PF09849 BUMPUSDA_RS00915 BUMPUSDA_RS00920 PF00578 AhpC/TSA family BUMPUSDA_RS00920 PF10417 C-terminal domain of 1-Cys peroxiredoxin BUMPUSDA_RS00925 PF03167 Uracil DNA glycosylase superfamily BUMPUSDA_RS00930 PF01025 GrpE BUMPUSDA_RS00935 PF01513 ATP-NAD kinase BUMPUSDA_RS00940 PF04355 SmpA / OmlA family BUMPUSDA_RS00945 PF00462 Glutaredoxin BUMPUSDA_RS00950 PF00929 Exonuclease BUMPUSDA_RS00955 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BUMPUSDA_RS00955 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BUMPUSDA_RS00960 PF01195 Peptidyl-tRNA hydrolase BUMPUSDA_RS00965 PF01926 50S ribosome-binding GTPase BUMPUSDA_RS00965 PF06071 Protein of unknown function (DUF933) BUMPUSDA_RS00970 PF00291 Pyridoxal-phosphate dependent enzyme BUMPUSDA_RS00970 PF14821 Threonine synthase N terminus BUMPUSDA_RS00975 PF00288 GHMP kinases N terminal domain BUMPUSDA_RS00975 PF08544 GHMP kinases C terminal BUMPUSDA_RS00980 PF00696 Amino acid kinase family BUMPUSDA_RS00980 PF00742 Homoserine dehydrogenase BUMPUSDA_RS00980 PF03447 Homoserine dehydrogenase, NAD binding domain BUMPUSDA_RS00985 PF00156 Phosphoribosyl transferase domain BUMPUSDA_RS00990 PF02569 Pantoate-beta-alanine ligase BUMPUSDA_RS00995 PF02548 Ketopantoate hydroxymethyltransferase BUMPUSDA_RS01000 PF01258 Prokaryotic dksA/traR C4-type zinc finger BUMPUSDA_RS01005 PF01416 tRNA pseudouridine synthase BUMPUSDA_RS01010 PF00905 Penicillin binding protein transpeptidase domain BUMPUSDA_RS01010 PF00912 Transglycosylase BUMPUSDA_RS01010 PF14814 Bifunctional transglycosylase second domain BUMPUSDA_RS01015 PF01043 SecA preprotein cross-linking domain BUMPUSDA_RS01015 PF02810 SEC-C motif BUMPUSDA_RS01015 PF07516 SecA Wing and Scaffold domain BUMPUSDA_RS01015 PF07517 SecA DEAD-like domain BUMPUSDA_RS01020 PF00293 NUDIX domain BUMPUSDA_RS01025 PF01121 Dephospho-CoA kinase BUMPUSDA_RS01030 PF00478 IMP dehydrogenase / GMP reductase domain BUMPUSDA_RS01035 PF00456 Transketolase, thiamine diphosphate binding domain BUMPUSDA_RS01040 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BUMPUSDA_RS01040 PF00364 Biotin-requiring enzyme BUMPUSDA_RS01040 PF02817 e3 binding domain BUMPUSDA_RS01045 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BUMPUSDA_RS01045 PF07992 Pyridine nucleotide-disulphide oxidoreductase BUMPUSDA_RS01050 PF02675 S-adenosylmethionine decarboxylase BUMPUSDA_RS01055 PF01564 Spermine/spermidine synthase BUMPUSDA_RS01060 PF01048 Phosphorylase superfamily BUMPUSDA_RS01065 PF01521 Iron-sulphur cluster biosynthesis BUMPUSDA_RS01070 PF00091 Tubulin/FtsZ family, GTPase domain BUMPUSDA_RS01070 PF12327 FtsZ family, C-terminal domain BUMPUSDA_RS01075 PF02491 SHS2 domain inserted in FTSA BUMPUSDA_RS01075 PF14450 Cell division protein FtsA BUMPUSDA_RS01080 PF01820 D-ala D-ala ligase N-terminus BUMPUSDA_RS01080 PF07478 D-ala D-ala ligase C-terminus BUMPUSDA_RS01085 PF01225 Mur ligase family, catalytic domain BUMPUSDA_RS01085 PF02875 Mur ligase family, glutamate ligase domain BUMPUSDA_RS01085 PF08245 Mur ligase middle domain BUMPUSDA_RS01090 PF03033 Glycosyltransferase family 28 N-terminal domain BUMPUSDA_RS01090 PF04101 Glycosyltransferase family 28 C-terminal domain BUMPUSDA_RS01095 PF01098 BUMPUSDA_RS01095 BUMPUSDA_RS01100 PF02875 Mur ligase family, glutamate ligase domain BUMPUSDA_RS01100 PF08245 Mur ligase middle domain BUMPUSDA_RS01105 PF00953 Glycosyl transferase family 4 BUMPUSDA_RS01110 PF01225 Mur ligase family, catalytic domain BUMPUSDA_RS01110 PF02875 Mur ligase family, glutamate ligase domain BUMPUSDA_RS01110 PF08245 Mur ligase middle domain BUMPUSDA_RS01115 PF01225 Mur ligase family, catalytic domain BUMPUSDA_RS01115 PF02875 Mur ligase family, glutamate ligase domain BUMPUSDA_RS01115 PF08245 Mur ligase middle domain BUMPUSDA_RS01120 PF00905 Penicillin binding protein transpeptidase domain BUMPUSDA_RS01120 PF03717 Penicillin-binding Protein dimerisation domain BUMPUSDA_RS01130 PF01795 MraW methylase family BUMPUSDA_RS01135 PF10369 Small subunit of acetolactate synthase BUMPUSDA_RS01135 PF13710 ACT domain BUMPUSDA_RS01140 PF00205 Thiamine pyrophosphate enzyme, central domain BUMPUSDA_RS01140 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BUMPUSDA_RS01140 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BUMPUSDA_RS01145 PF02424 ApbE family BUMPUSDA_RS01150 PF00595 PDZ domain (Also known as DHR or GLGF) BUMPUSDA_RS01150 PF13365 Trypsin-like peptidase domain BUMPUSDA_RS01155 PF14602 Hexapeptide repeat of succinyl-transferase BUMPUSDA_RS01155 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal BUMPUSDA_RS01160 PF00557 Metallopeptidase family M24 BUMPUSDA_RS01165 PF00318 Ribosomal protein S2 BUMPUSDA_RS01170 PF00889 Elongation factor TS BUMPUSDA_RS01175 PF00696 Amino acid kinase family BUMPUSDA_RS01180 PF01765 Ribosome recycling factor BUMPUSDA_RS01185 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BUMPUSDA_RS01185 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal BUMPUSDA_RS01185 PF13288 DXP reductoisomerase C-terminal domain BUMPUSDA_RS01190 PF01255 Putative undecaprenyl diphosphate synthase BUMPUSDA_RS01195 PF01103 Surface antigen BUMPUSDA_RS01195 PF07244 Surface antigen variable number repeat BUMPUSDA_RS01200 PF07977 FabA-like domain BUMPUSDA_RS01205 PF01336 OB-fold nucleic acid binding domain BUMPUSDA_RS01205 PF02811 PHP domain BUMPUSDA_RS01205 PF07733 Bacterial DNA polymerase III alpha subunit BUMPUSDA_RS01205 PF14579 Helix-hairpin-helix motif BUMPUSDA_RS01210 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BUMPUSDA_RS01210 PF03129 Anticodon binding domain BUMPUSDA_RS01210 PF04073 Aminoacyl-tRNA editing domain BUMPUSDA_RS01215 PF01312 FlhB HrpN YscU SpaS Family BUMPUSDA_RS01220 PF00771 FHIPEP family BUMPUSDA_RS01225 PF00750 tRNA synthetases class I (R) BUMPUSDA_RS01225 PF03485 Arginyl tRNA synthetase N terminal domain BUMPUSDA_RS01225 PF05746 DALR anticodon binding domain BUMPUSDA_RS01245 PF00075 RNase H BUMPUSDA_RS01250 PF00075 RNase H BUMPUSDA_RS01255 PF00929 Exonuclease BUMPUSDA_RS01265 PF13580 SIS domain BUMPUSDA_RS01270 PF00156 Phosphoribosyl transferase domain BUMPUSDA_RS01275 PF01025 GrpE BUMPUSDA_RS01280 PF03658 RnfH family Ubiquitin BUMPUSDA_RS01285 PF01668 SmpB protein BUMPUSDA_RS01290 PF14437 BUMPUSDA_RS01290 BUMPUSDA_RS01295 PF01648 4'-phosphopantetheinyl transferase superfamily BUMPUSDA_RS01300 PF01926 50S ribosome-binding GTPase BUMPUSDA_RS01300 PF07650 KH domain BUMPUSDA_RS01305 PF00035 Double-stranded RNA binding motif BUMPUSDA_RS01305 PF14622 Ribonuclease-III-like BUMPUSDA_RS01310 PF00717 Peptidase S24-like BUMPUSDA_RS01310 PF10502 Signal peptidase, peptidase S26 BUMPUSDA_RS01315 PF00009 Elongation factor Tu GTP binding domain BUMPUSDA_RS01315 PF00679 Elongation factor G C-terminus BUMPUSDA_RS01315 PF03144 Elongation factor Tu domain 2 BUMPUSDA_RS01315 PF06421 GTP-binding protein LepA C-terminus BUMPUSDA_RS01325 PF03054 tRNA methyl transferase BUMPUSDA_RS01330 PF04356 Protein of unknown function (DUF489) BUMPUSDA_RS01335 PF00206 Lyase BUMPUSDA_RS01335 PF08328 Adenylosuccinate lyase C-terminal BUMPUSDA_RS01345 PF13561 Enoyl-(Acyl carrier protein) reductase BUMPUSDA_RS01350 PF00773 RNB domain BUMPUSDA_RS01350 PF08206 Ribonuclease B OB domain BUMPUSDA_RS01355 PF01914 BUMPUSDA_RS01355 BUMPUSDA_RS01360 PF03099 Biotin/lipoate A/B protein ligase family BUMPUSDA_RS01365 PF04055 Radical SAM superfamily BUMPUSDA_RS01365 PF16881 BUMPUSDA_RS01365 BUMPUSDA_RS01370 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BUMPUSDA_RS01375 PF00925 GTP cyclohydrolase II BUMPUSDA_RS01380 PF13091 PLD-like domain BUMPUSDA_RS01385 PF03061 Thioesterase superfamily BUMPUSDA_RS01390 PF04279 BUMPUSDA_RS01390 BUMPUSDA_RS01395 PF06790 BUMPUSDA_RS01395 BUMPUSDA_RS01400 PF00290 Tryptophan synthase alpha chain BUMPUSDA_RS01405 PF00291 Pyridoxal-phosphate dependent enzyme BUMPUSDA_RS01410 PF00218 Indole-3-glycerol phosphate synthase BUMPUSDA_RS01410 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BUMPUSDA_RS01415 PF00591 Glycosyl transferase family, a/b domain BUMPUSDA_RS01415 PF02885 Glycosyl transferase family, helical bundle domain BUMPUSDA_RS01420 PF00892 EamA-like transporter family BUMPUSDA_RS01425 PF00849 RNA pseudouridylate synthase BUMPUSDA_RS01425 PF01479 S4 domain BUMPUSDA_RS01430 PF01343 Peptidase family S49 BUMPUSDA_RS01430 PF08496 BUMPUSDA_RS01430 BUMPUSDA_RS01435 PF01131 DNA topoisomerase BUMPUSDA_RS01435 PF01396 BUMPUSDA_RS01435 BUMPUSDA_RS01435 PF01751 Toprim domain BUMPUSDA_RS01435 PF08272 Topoisomerase I zinc-ribbon-like BUMPUSDA_RS01440 PF00459 Inositol monophosphatase family BUMPUSDA_RS01445 PF04055 Radical SAM superfamily BUMPUSDA_RS01445 PF13394 4Fe-4S single cluster domain BUMPUSDA_RS01450 PF04551 GcpE protein BUMPUSDA_RS01455 PF13393 Histidyl-tRNA synthetase BUMPUSDA_RS01460 PF00464 Serine hydroxymethyltransferase BUMPUSDA_RS01465 PF13500 AAA domain BUMPUSDA_RS01470 PF04055 Radical SAM superfamily BUMPUSDA_RS01470 PF06968 Biotin and Thiamin Synthesis associated domain BUMPUSDA_RS01475 PF00202 Aminotransferase class-III BUMPUSDA_RS01480 PF10282 Lactonase, 7-bladed beta-propeller BUMPUSDA_RS01485 PF00270 DEAD/DEAH box helicase BUMPUSDA_RS01485 PF00271 Helicase conserved C-terminal domain BUMPUSDA_RS01485 PF02559 CarD-like/TRCF domain BUMPUSDA_RS01485 PF03461 TRCF domain BUMPUSDA_RS01490 PF02687 BUMPUSDA_RS01490 BUMPUSDA_RS01490 PF12704 MacB-like periplasmic core domain BUMPUSDA_RS01495 PF00005 ABC transporter BUMPUSDA_RS01500 PF02687 BUMPUSDA_RS01500 BUMPUSDA_RS01505 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BUMPUSDA_RS01505 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BUMPUSDA_RS01510 PF14489 QueF-like protein BUMPUSDA_RS01510 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term BUMPUSDA_RS01515 PF00258 Flavodoxin BUMPUSDA_RS01520 PF00875 DNA photolyase BUMPUSDA_RS01520 PF03441 FAD binding domain of DNA photolyase BUMPUSDA_RS01525 PF01784 NIF3 (NGG1p interacting factor 3) BUMPUSDA_RS01530 PF00676 Dehydrogenase E1 component BUMPUSDA_RS01530 PF02779 Transketolase, pyrimidine binding domain BUMPUSDA_RS01530 PF16078 BUMPUSDA_RS01530 BUMPUSDA_RS01530 PF16870 BUMPUSDA_RS01530 BUMPUSDA_RS01535 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BUMPUSDA_RS01535 PF00364 Biotin-requiring enzyme BUMPUSDA_RS01540 PF00300 Histidine phosphatase superfamily (branch 1) BUMPUSDA_RS01545 PF00365 Phosphofructokinase BUMPUSDA_RS01550 PF00230 Major intrinsic protein BUMPUSDA_RS01555 PF00121 Triosephosphate isomerase BUMPUSDA_RS01560 PF00216 Bacterial DNA-binding protein BUMPUSDA_RS01565 PF00575 S1 RNA binding domain BUMPUSDA_RS01570 PF02224 Cytidylate kinase BUMPUSDA_RS01575 PF02224 Cytidylate kinase BUMPUSDA_RS01580 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BUMPUSDA_RS01585 PF00266 Aminotransferase class-V BUMPUSDA_RS01590 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BUMPUSDA_RS01590 PF02403 Seryl-tRNA synthetase N-terminal domain BUMPUSDA_RS01595 PF07992 Pyridine nucleotide-disulphide oxidoreductase BUMPUSDA_RS01600 PF01176 Translation initiation factor 1A / IF-1 BUMPUSDA_RS01605 PF00152 tRNA synthetases class II (D, K and N) BUMPUSDA_RS01605 PF01336 OB-fold nucleic acid binding domain BUMPUSDA_RS01605 PF02938 GAD domain BUMPUSDA_RS01610 PF00950 BUMPUSDA_RS01610 BUMPUSDA_RS01615 PF00005 ABC transporter BUMPUSDA_RS01620 PF01297 Periplasmic solute binding protein family BUMPUSDA_RS01625 PF01297 Periplasmic solute binding protein family BUMPUSDA_RS01630 PF01551 Peptidase family M23 BUMPUSDA_RS01635 PF00224 Pyruvate kinase, barrel domain BUMPUSDA_RS01635 PF02887 Pyruvate kinase, alpha/beta domain BUMPUSDA_RS01640 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BUMPUSDA_RS01640 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BUMPUSDA_RS01645 PF01435 Peptidase family M48 BUMPUSDA_RS01650 PF03471 Transporter associated domain BUMPUSDA_RS01650 PF03741 BUMPUSDA_RS01650 BUMPUSDA_RS01655 PF00814 Glycoprotease family BUMPUSDA_RS01660 PF03776 Septum formation topological specificity factor MinE BUMPUSDA_RS01665 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BUMPUSDA_RS01670 PF03775 Septum formation inhibitor MinC, C-terminal domain BUMPUSDA_RS01670 PF05209 Septum formation inhibitor MinC, N-terminal domain BUMPUSDA_RS01675 PF05175 Methyltransferase small domain BUMPUSDA_RS01675 PF08468 Methyltransferase small domain N-terminal BUMPUSDA_RS01690 PF00691 OmpA family BUMPUSDA_RS01690 PF01389 OmpA-like transmembrane domain BUMPUSDA_RS01695 PF03023 BUMPUSDA_RS01695 BUMPUSDA_RS01700 PF01979 Amidohydrolase family BUMPUSDA_RS01710 PF13144 SAF-like BUMPUSDA_RS01715 PF00460 Flagella basal body rod protein BUMPUSDA_RS01720 PF00460 Flagella basal body rod protein BUMPUSDA_RS01720 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BUMPUSDA_RS01725 PF03963 BUMPUSDA_RS01725 BUMPUSDA_RS01725 PF13860 FlgD Ig-like domain BUMPUSDA_RS01725 PF13861 FlgD Tudor-like domain BUMPUSDA_RS01730 PF00460 Flagella basal body rod protein BUMPUSDA_RS01730 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BUMPUSDA_RS01730 PF07559 Flagellar basal body protein FlaE BUMPUSDA_RS01735 PF00460 Flagella basal body rod protein BUMPUSDA_RS01735 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BUMPUSDA_RS01740 PF00460 Flagella basal body rod protein BUMPUSDA_RS01740 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BUMPUSDA_RS01745 PF02107 BUMPUSDA_RS01745 BUMPUSDA_RS01750 PF02119 BUMPUSDA_RS01750 BUMPUSDA_RS01755 PF10135 BUMPUSDA_RS01755 BUMPUSDA_RS01765 PF00575 S1 RNA binding domain BUMPUSDA_RS01765 PF10150 Ribonuclease E/G family BUMPUSDA_RS01770 PF00849 RNA pseudouridylate synthase BUMPUSDA_RS01770 PF01479 S4 domain BUMPUSDA_RS01775 PF01783 Ribosomal L32p protein family BUMPUSDA_RS01780 PF00698 Acyl transferase domain BUMPUSDA_RS01785 PF13561 Enoyl-(Acyl carrier protein) reductase BUMPUSDA_RS01790 PF00550 Phosphopantetheine attachment site BUMPUSDA_RS01795 PF02223 Thymidylate kinase BUMPUSDA_RS01800 PF09115 DNA polymerase III, delta subunit, C terminal BUMPUSDA_RS01800 PF13177 DNA polymerase III, delta subunit BUMPUSDA_RS01805 PF01026 TatD related DNase BUMPUSDA_RS01810 PF00367 phosphotransferase system, EIIB BUMPUSDA_RS01810 PF02378 Phosphotransferase system, EIIC BUMPUSDA_RS01815 PF01230 HIT domain BUMPUSDA_RS01820 PF13036 Protein of unknown function (DUF3897) BUMPUSDA_RS01825 PF00267 Gram-negative porin BUMPUSDA_RS01830 PF00152 tRNA synthetases class II (D, K and N) BUMPUSDA_RS01830 PF01336 OB-fold nucleic acid binding domain BUMPUSDA_RS01835 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BUMPUSDA_RS01840 PF01180 Dihydroorotate dehydrogenase BUMPUSDA_RS01845 PF01170 Putative RNA methylase family UPF0020 BUMPUSDA_RS01845 PF02926 THUMP domain BUMPUSDA_RS01845 PF10672 S-adenosylmethionine-dependent methyltransferase BUMPUSDA_RS01850 PF00005 ABC transporter BUMPUSDA_RS01850 PF12848 ABC transporter BUMPUSDA_RS01855 PF00581 Rhodanese-like domain BUMPUSDA_RS01855 PF12368 BUMPUSDA_RS01855 BUMPUSDA_RS01860 PF00133 tRNA synthetases class I (I, L, M and V) BUMPUSDA_RS01860 PF08264 Anticodon-binding domain of tRNA BUMPUSDA_RS01860 PF10458 Valyl tRNA synthetase tRNA binding arm BUMPUSDA_RS01865 PF00883 Cytosol aminopeptidase family, catalytic domain BUMPUSDA_RS01865 PF02789 Cytosol aminopeptidase family, N-terminal domain BUMPUSDA_RS01870 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BUMPUSDA_RS01870 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BUMPUSDA_RS01875 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BUMPUSDA_RS01875 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BUMPUSDA_RS01880 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain BUMPUSDA_RS01880 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain BUMPUSDA_RS01885 PF01042 Endoribonuclease L-PSP BUMPUSDA_RS01890 PF00270 DEAD/DEAH box helicase BUMPUSDA_RS01890 PF00271 Helicase conserved C-terminal domain BUMPUSDA_RS01890 PF03880 DbpA RNA binding domain BUMPUSDA_RS01895 PF00013 KH domain BUMPUSDA_RS01895 PF00575 S1 RNA binding domain BUMPUSDA_RS01895 PF01138 3' exoribonuclease family, domain 1 BUMPUSDA_RS01895 PF03725 3' exoribonuclease family, domain 2 BUMPUSDA_RS01895 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BUMPUSDA_RS01900 PF00312 Ribosomal protein S15 BUMPUSDA_RS01905 PF01509 TruB family pseudouridylate synthase (N terminal domain) BUMPUSDA_RS01905 PF09157 Pseudouridine synthase II TruB, C-terminal BUMPUSDA_RS01905 PF16198 BUMPUSDA_RS01905 BUMPUSDA_RS01910 PF02033 Ribosome-binding factor A BUMPUSDA_RS01915 PF00009 Elongation factor Tu GTP binding domain BUMPUSDA_RS01915 PF04760 Translation initiation factor IF-2, N-terminal region BUMPUSDA_RS01915 PF08364 BUMPUSDA_RS01915 BUMPUSDA_RS01915 PF11987 Translation-initiation factor 2 BUMPUSDA_RS01920 PF08529 NusA N-terminal domain BUMPUSDA_RS01920 PF13184 NusA-like KH domain BUMPUSDA_RS01920 PF14520 Helix-hairpin-helix domain BUMPUSDA_RS01925 PF03840 Preprotein translocase SecG subunit BUMPUSDA_RS01930 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BUMPUSDA_RS01930 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BUMPUSDA_RS01930 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BUMPUSDA_RS01930 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BUMPUSDA_RS01935 PF00004 ATPase family associated with various cellular activities (AAA) BUMPUSDA_RS01935 PF01434 Peptidase family M41 BUMPUSDA_RS01935 PF06480 FtsH Extracellular BUMPUSDA_RS01940 PF01728 FtsJ-like methyltransferase BUMPUSDA_RS01945 PF01272 Transcription elongation factor, GreA/GreB, C-term BUMPUSDA_RS01945 PF03449 Transcription elongation factor, N-terminal BUMPUSDA_RS01950 PF01722 BolA-like protein BUMPUSDA_RS01955 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BUMPUSDA_RS01960 PF00829 Ribosomal prokaryotic L21 protein BUMPUSDA_RS01965 PF01016 Ribosomal L27 protein BUMPUSDA_RS01970 PF01018 GTP1/OBG BUMPUSDA_RS01970 PF01926 50S ribosome-binding GTPase BUMPUSDA_RS01975 PF00380 Ribosomal protein S9/S16 BUMPUSDA_RS01980 PF00572 Ribosomal protein L13 BUMPUSDA_RS01985 PF00800 Prephenate dehydratase BUMPUSDA_RS01985 PF01817 Chorismate mutase type II BUMPUSDA_RS01990 PF00448 SRP54-type protein, GTPase domain BUMPUSDA_RS01990 PF02881 SRP54-type protein, helical bundle domain BUMPUSDA_RS01990 PF02978 Signal peptide binding domain BUMPUSDA_RS01995 PF00886 Ribosomal protein S16 BUMPUSDA_RS02000 PF01782 RimM N-terminal domain BUMPUSDA_RS02000 PF05239 PRC-barrel domain BUMPUSDA_RS02005 PF01746 tRNA (Guanine-1)-methyltransferase BUMPUSDA_RS02010 PF01245 Ribosomal protein L19 BUMPUSDA_RS02015 PF01523 Putative modulator of DNA gyrase BUMPUSDA_RS02020 PF01220 Dehydroquinase class II BUMPUSDA_RS02025 PF02954 Bacterial regulatory protein, Fis family BUMPUSDA_RS02030 PF00849 RNA pseudouridylate synthase BUMPUSDA_RS02030 PF01479 S4 domain BUMPUSDA_RS02035 PF13525 Outer membrane lipoprotein BUMPUSDA_RS02040 PF01411 tRNA synthetases class II (A) BUMPUSDA_RS02040 PF02272 DHHA1 domain BUMPUSDA_RS02040 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BUMPUSDA_RS02045 PF02599 Global regulator protein family BUMPUSDA_RS02060 PF04262 Glutamate-cysteine ligase BUMPUSDA_RS02065 PF00438 S-adenosylmethionine synthetase, N-terminal domain BUMPUSDA_RS02065 PF02772 S-adenosylmethionine synthetase, central domain BUMPUSDA_RS02065 PF02773 S-adenosylmethionine synthetase, C-terminal domain BUMPUSDA_RS02070 PF04231 Endonuclease I BUMPUSDA_RS02075 PF04452 RNA methyltransferase BUMPUSDA_RS02080 PF01812 5-formyltetrahydrofolate cyclo-ligase family BUMPUSDA_RS02085 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BUMPUSDA_RS02105 PF00749 tRNA synthetases class I (E and Q), catalytic domain BUMPUSDA_RS02105 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BUMPUSDA_RS02110 PF00117 Glutamine amidotransferase class-I BUMPUSDA_RS02110 PF06418 CTP synthase N-terminus BUMPUSDA_RS02115 PF00113 Enolase, C-terminal TIM barrel domain BUMPUSDA_RS02115 PF03952 Enolase, N-terminal domain BUMPUSDA_RS02120 PF04055 Radical SAM superfamily BUMPUSDA_RS02120 PF13394 4Fe-4S single cluster domain BUMPUSDA_RS02125 PF01242 6-pyruvoyl tetrahydropterin synthase BUMPUSDA_RS02130 PF01476 LysM domain BUMPUSDA_RS02130 PF01551 Peptidase family M23 BUMPUSDA_RS02135 PF02542 YgbB family BUMPUSDA_RS02140 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BUMPUSDA_RS02145 PF04977 Septum formation initiator BUMPUSDA_RS02150 PF01583 Adenylylsulphate kinase BUMPUSDA_RS02155 PF00009 Elongation factor Tu GTP binding domain BUMPUSDA_RS02160 PF01507 Phosphoadenosine phosphosulfate reductase family BUMPUSDA_RS02165 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BUMPUSDA_RS02165 PF10414 Sirohaem synthase dimerisation region BUMPUSDA_RS02165 PF13241 Putative NAD(P)-binding BUMPUSDA_RS02170 PF01507 Phosphoadenosine phosphosulfate reductase family BUMPUSDA_RS02175 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BUMPUSDA_RS02175 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BUMPUSDA_RS02180 PF00175 Oxidoreductase NAD-binding domain BUMPUSDA_RS02180 PF00258 Flavodoxin BUMPUSDA_RS02180 PF00667 FAD binding domain BUMPUSDA_RS02185 PF00488 MutS domain V BUMPUSDA_RS02185 PF01624 MutS domain I BUMPUSDA_RS02185 PF05188 MutS domain II BUMPUSDA_RS02185 PF05190 MutS family domain IV BUMPUSDA_RS02185 PF05192 MutS domain III BUMPUSDA_RS02190 PF01323 DSBA-like thioredoxin domain BUMPUSDA_RS02195 PF01367 5'-3' exonuclease, C-terminal SAM fold BUMPUSDA_RS02195 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BUMPUSDA_RS02200 PF01926 50S ribosome-binding GTPase BUMPUSDA_RS02205 PF00009 Elongation factor Tu GTP binding domain BUMPUSDA_RS02205 PF00679 Elongation factor G C-terminus BUMPUSDA_RS02205 PF03144 Elongation factor Tu domain 2 BUMPUSDA_RS02210 PF00625 Guanylate kinase BUMPUSDA_RS02220 PF00472 RF-1 domain BUMPUSDA_RS02220 PF03462 PCRF domain BUMPUSDA_RS02225 PF00152 tRNA synthetases class II (D, K and N) BUMPUSDA_RS02225 PF01336 OB-fold nucleic acid binding domain BUMPUSDA_RS02230 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BUMPUSDA_RS02230 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BUMPUSDA_RS02235 PF01790 BUMPUSDA_RS02235 BUMPUSDA_RS02240 PF00303 Thymidylate synthase BUMPUSDA_RS02245 PF00919 Uncharacterized protein family UPF0004 BUMPUSDA_RS02245 PF01938 TRAM domain BUMPUSDA_RS02245 PF04055 Radical SAM superfamily BUMPUSDA_RS02250 PF02130 Uncharacterized protein family UPF0054 BUMPUSDA_RS02255 PF00571 CBS domain BUMPUSDA_RS02255 PF03471 Transporter associated domain BUMPUSDA_RS02260 PF00133 tRNA synthetases class I (I, L, M and V) BUMPUSDA_RS02260 PF08264 Anticodon-binding domain of tRNA BUMPUSDA_RS02260 PF13603 Leucyl-tRNA synthetase, Domain 2 BUMPUSDA_RS02265 PF06144 DNA polymerase III, delta subunit BUMPUSDA_RS02265 PF14840 Processivity clamp loader gamma complex DNA pol III C-term BUMPUSDA_RS02275 PF01206 Sulfurtransferase TusA BUMPUSDA_RS02280 PF01118 Semialdehyde dehydrogenase, NAD binding domain BUMPUSDA_RS02280 PF02774 Semialdehyde dehydrogenase, dimerisation domain BUMPUSDA_RS02285 PF01914 BUMPUSDA_RS02285 BUMPUSDA_RS02290 PF00162 Phosphoglycerate kinase BUMPUSDA_RS02295 PF01116 Fructose-bisphosphate aldolase class-II BUMPUSDA_RS02300 PF00924 Mechanosensitive ion channel BUMPUSDA_RS02300 PF05552 Conserved TM helix BUMPUSDA_RS02305 PF04257 Exodeoxyribonuclease V, gamma subunit BUMPUSDA_RS02310 PF00580 UvrD/REP helicase N-terminal domain BUMPUSDA_RS02310 PF13361 UvrD-like helicase C-terminal domain BUMPUSDA_RS02315 PF13538 UvrD-like helicase C-terminal domain BUMPUSDA_RS02315 PF13604 AAA domain BUMPUSDA_RS02320 PF00583 Acetyltransferase (GNAT) family BUMPUSDA_RS02320 PF00696 Amino acid kinase family BUMPUSDA_RS02330 PF03562 MltA specific insert domain BUMPUSDA_RS02330 PF06725 3D domain BUMPUSDA_RS02335 PF00885 6,7-dimethyl-8-ribityllumazine synthase BUMPUSDA_RS02340 PF00586 AIR synthase related protein, N-terminal domain BUMPUSDA_RS02340 PF02769 AIR synthase related protein, C-terminal domain BUMPUSDA_RS02345 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BUMPUSDA_RS02350 PF01872 RibD C-terminal domain BUMPUSDA_RS02355 PF01029 NusB family BUMPUSDA_RS02360 PF02779 Transketolase, pyrimidine binding domain BUMPUSDA_RS02360 PF02780 Transketolase, C-terminal domain BUMPUSDA_RS02360 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BUMPUSDA_RS02365 PF00348 Polyprenyl synthetase BUMPUSDA_RS02370 PF07690 Major Facilitator Superfamily BUMPUSDA_RS02375 PF04358 DsrC like protein BUMPUSDA_RS02380 PF01040 UbiA prenyltransferase family BUMPUSDA_RS02385 PF03626 BUMPUSDA_RS02385 BUMPUSDA_RS02390 PF00510 Cytochrome c oxidase subunit III BUMPUSDA_RS02395 PF00115 Cytochrome C and Quinol oxidase polypeptide I BUMPUSDA_RS02400 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BUMPUSDA_RS02400 PF06481 COX Aromatic Rich Motif BUMPUSDA_RS02405 PF01722 BolA-like protein BUMPUSDA_RS02410 PF05697 Bacterial trigger factor protein (TF) BUMPUSDA_RS02410 PF05698 Bacterial trigger factor protein (TF) C-terminus BUMPUSDA_RS02415 PF00574 Clp protease BUMPUSDA_RS02420 PF06689 ClpX C4-type zinc finger BUMPUSDA_RS02420 PF07724 AAA domain (Cdc48 subfamily) BUMPUSDA_RS02420 PF10431 C-terminal, D2-small domain, of ClpB protein BUMPUSDA_RS02425 PF00004 ATPase family associated with various cellular activities (AAA) BUMPUSDA_RS02425 PF02190 ATP-dependent protease La (LON) domain BUMPUSDA_RS02425 PF05362 Lon protease (S16) C-terminal proteolytic domain BUMPUSDA_RS02430 PF13145 PPIC-type PPIASE domain BUMPUSDA_RS02430 PF13624 SurA N-terminal domain BUMPUSDA_RS02435 PF06508 Queuosine biosynthesis protein QueC BUMPUSDA_RS02440 PF00005 ABC transporter BUMPUSDA_RS02440 PF00664 ABC transporter transmembrane region BUMPUSDA_RS02445 PF00005 ABC transporter BUMPUSDA_RS02445 PF00664 ABC transporter transmembrane region BUMPUSDA_RS02450 PF12169 DNA polymerase III subunits gamma and tau domain III BUMPUSDA_RS02450 PF13177 DNA polymerase III, delta subunit BUMPUSDA_RS02455 PF12170 DNA polymerase III tau subunit V interacting with alpha BUMPUSDA_RS02460 PF02575 YbaB/EbfC DNA-binding family BUMPUSDA_RS02465 PF00183 Hsp90 protein BUMPUSDA_RS02465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BUMPUSDA_RS02470 PF00406 Adenylate kinase BUMPUSDA_RS02470 PF05191 Adenylate kinase, active site lid BUMPUSDA_RS02480 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BUMPUSDA_RS02480 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BUMPUSDA_RS02485 PF01406 tRNA synthetases class I (C) catalytic domain BUMPUSDA_RS02485 PF09190 DALR domain BUMPUSDA_RS02490 PF04359 Protein of unknown function (DUF493) BUMPUSDA_RS02495 PF00313 'Cold-shock' DNA-binding domain BUMPUSDA_RS02515 PF01488 Shikimate / quinate 5-dehydrogenase BUMPUSDA_RS02515 PF08501 Shikimate dehydrogenase substrate binding domain BUMPUSDA_RS02520 PF01300 Telomere recombination BUMPUSDA_RS02525 PF04361 BUMPUSDA_RS02525 BUMPUSDA_RS02530 PF01327 Polypeptide deformylase BUMPUSDA_RS02535 PF00551 Formyl transferase BUMPUSDA_RS02535 PF02911 Formyl transferase, C-terminal domain BUMPUSDA_RS02540 PF01196 Ribosomal protein L17 BUMPUSDA_RS02545 PF01000 RNA polymerase Rpb3/RpoA insert domain BUMPUSDA_RS02545 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BUMPUSDA_RS02545 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BUMPUSDA_RS02550 PF00163 Ribosomal protein S4/S9 N-terminal domain BUMPUSDA_RS02550 PF01479 S4 domain BUMPUSDA_RS02555 PF00411 Ribosomal protein S11 BUMPUSDA_RS02560 PF00416 Ribosomal protein S13/S18 BUMPUSDA_RS02565 PF00444 Ribosomal protein L36 BUMPUSDA_RS02570 PF00344 SecY translocase BUMPUSDA_RS02575 PF00828 Ribosomal protein L18e/L15 BUMPUSDA_RS02580 PF00327 Ribosomal protein L30p/L7e BUMPUSDA_RS02585 PF00333 Ribosomal protein S5, N-terminal domain BUMPUSDA_RS02585 PF03719 Ribosomal protein S5, C-terminal domain BUMPUSDA_RS02590 PF00861 Ribosomal L18p/L5e family BUMPUSDA_RS02595 PF00347 Ribosomal protein L6 BUMPUSDA_RS02600 PF00410 Ribosomal protein S8 BUMPUSDA_RS02605 PF00253 Ribosomal protein S14p/S29e BUMPUSDA_RS02610 PF00281 Ribosomal protein L5 BUMPUSDA_RS02610 PF00673 ribosomal L5P family C-terminus BUMPUSDA_RS02615 PF17136 BUMPUSDA_RS02615 BUMPUSDA_RS02620 PF00238 Ribosomal protein L14p/L23e BUMPUSDA_RS02625 PF00366 Ribosomal protein S17 BUMPUSDA_RS02630 PF00831 Ribosomal L29 protein BUMPUSDA_RS02635 PF00252 Ribosomal protein L16p/L10e BUMPUSDA_RS02640 PF00189 Ribosomal protein S3, C-terminal domain BUMPUSDA_RS02640 PF07650 KH domain BUMPUSDA_RS02645 PF00237 Ribosomal protein L22p/L17e BUMPUSDA_RS02650 PF00203 Ribosomal protein S19 BUMPUSDA_RS02655 PF00181 Ribosomal Proteins L2, RNA binding domain BUMPUSDA_RS02655 PF03947 Ribosomal Proteins L2, C-terminal domain BUMPUSDA_RS02660 PF00276 Ribosomal protein L23 BUMPUSDA_RS02665 PF00573 Ribosomal protein L4/L1 family BUMPUSDA_RS02670 PF00297 Ribosomal protein L3 BUMPUSDA_RS02675 PF00338 Ribosomal protein S10p/S20e BUMPUSDA_RS02680 PF00009 Elongation factor Tu GTP binding domain BUMPUSDA_RS02680 PF03143 Elongation factor Tu C-terminal domain BUMPUSDA_RS02680 PF03144 Elongation factor Tu domain 2 BUMPUSDA_RS02685 PF00009 Elongation factor Tu GTP binding domain BUMPUSDA_RS02685 PF00679 Elongation factor G C-terminus BUMPUSDA_RS02685 PF03144 Elongation factor Tu domain 2 BUMPUSDA_RS02685 PF03764 Elongation factor G, domain IV BUMPUSDA_RS02685 PF14492 Elongation Factor G, domain II BUMPUSDA_RS02690 PF00177 Ribosomal protein S7p/S5e BUMPUSDA_RS02695 PF00164 Ribosomal protein S12/S23 BUMPUSDA_RS02700 PF04077 DsrH like protein BUMPUSDA_RS02705 PF02635 DsrE/DsrF-like family BUMPUSDA_RS02710 PF02635 DsrE/DsrF-like family BUMPUSDA_RS02715 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BUMPUSDA_RS02715 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BUMPUSDA_RS02720 PF00202 Aminotransferase class-III BUMPUSDA_RS02725 PF07690 Major Facilitator Superfamily BUMPUSDA_RS02730 PF00579 tRNA synthetases class I (W and Y) BUMPUSDA_RS02735 PF00834 Ribulose-phosphate 3 epimerase family BUMPUSDA_RS02740 PF01761 3-dehydroquinate synthase BUMPUSDA_RS02745 PF01202 Shikimate kinase BUMPUSDA_RS02755 PF01048 Phosphorylase superfamily BUMPUSDA_RS02760 PF01676 Metalloenzyme superfamily BUMPUSDA_RS02765 PF00009 Elongation factor Tu GTP binding domain BUMPUSDA_RS02765 PF03144 Elongation factor Tu domain 2 BUMPUSDA_RS02765 PF16658 BUMPUSDA_RS02765 BUMPUSDA_RS02770 PF00710 Asparaginase BUMPUSDA_RS02775 PF01106 NifU-like domain BUMPUSDA_RS02775 PF01521 Iron-sulphur cluster biosynthesis BUMPUSDA_RS02780 PF00436 Single-strand binding protein family BUMPUSDA_RS02785 PF00772 DnaB-like helicase N terminal domain BUMPUSDA_RS02785 PF03796 DnaB-like helicase C terminal domain BUMPUSDA_RS02790 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BUMPUSDA_RS02790 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BUMPUSDA_RS02795 PF03652 Uncharacterised protein family (UPF0081) BUMPUSDA_RS02800 PF01168 Alanine racemase, N-terminal domain BUMPUSDA_RS02805 PF04055 Radical SAM superfamily BUMPUSDA_RS02810 PF02390 Putative methyltransferase BUMPUSDA_RS02815 PF00730 HhH-GPD superfamily base excision DNA repair protein BUMPUSDA_RS02815 PF14815 NUDIX domain BUMPUSDA_RS02820 PF04362 Bacterial Fe(2+) trafficking BUMPUSDA_RS02825 PF01177 Asp/Glu/Hydantoin racemase BUMPUSDA_RS02830 PF00929 Exonuclease BUMPUSDA_RS02830 PF08411 Exonuclease C-terminal BUMPUSDA_RS02835 PF04363 BUMPUSDA_RS02835 BUMPUSDA_RS02850 PF00156 Phosphoribosyl transferase domain BUMPUSDA_RS02855 PF00692 dUTPase BUMPUSDA_RS02860 PF00459 Inositol monophosphatase family BUMPUSDA_RS02865 PF01281 Ribosomal protein L9, N-terminal domain BUMPUSDA_RS02865 PF03948 Ribosomal protein L9, C-terminal domain BUMPUSDA_RS02870 PF01084 Ribosomal protein S18 BUMPUSDA_RS02875 PF01250 Ribosomal protein S6 BUMPUSDA_RS02880 PF00575 S1 RNA binding domain BUMPUSDA_RS02880 PF00773 RNB domain BUMPUSDA_RS02880 PF08206 Ribonuclease B OB domain BUMPUSDA_RS02885 PF00709 Adenylosuccinate synthetase BUMPUSDA_RS02890 PF01145 SPFH domain / Band 7 family BUMPUSDA_RS02895 PF01145 SPFH domain / Band 7 family BUMPUSDA_RS02900 PF01715 IPP transferase BUMPUSDA_RS02905 PF01119 DNA mismatch repair protein, C-terminal domain BUMPUSDA_RS02905 PF08676 MutL C terminal dimerisation domain BUMPUSDA_RS02905 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BUMPUSDA_RS02910 PF01232 Mannitol dehydrogenase Rossmann domain BUMPUSDA_RS02910 PF08125 Mannitol dehydrogenase C-terminal domain BUMPUSDA_RS02915 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BUMPUSDA_RS02915 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BUMPUSDA_RS02915 PF02378 Phosphotransferase system, EIIC BUMPUSDA_RS02920 PF00342 Phosphoglucose isomerase BUMPUSDA_RS02925 PF00929 Exonuclease BUMPUSDA_RS02940 PF01520 N-acetylmuramoyl-L-alanine amidase BUMPUSDA_RS02945 PF01197 Ribosomal protein L31 BUMPUSDA_RS02955 PF00227 Proteasome subunit BUMPUSDA_RS02960 PF00004 ATPase family associated with various cellular activities (AAA) BUMPUSDA_RS02960 PF07724 AAA domain (Cdc48 subfamily) BUMPUSDA_RS02960 PF10431 C-terminal, D2-small domain, of ClpB protein BUMPUSDA_RS02965 PF00011 Hsp20/alpha crystallin family BUMPUSDA_RS02970 PF00175 Oxidoreductase NAD-binding domain BUMPUSDA_RS02970 PF00970 Oxidoreductase FAD-binding domain BUMPUSDA_RS02975 PF00152 tRNA synthetases class II (D, K and N) BUMPUSDA_RS02980 PF01467 Cytidylyltransferase BUMPUSDA_RS02995 PF04445 Putative SAM-dependent methyltransferase BUMPUSDA_RS03000 PF01384 BUMPUSDA_RS03000 BUMPUSDA_RS03005 PF07690 Major Facilitator Superfamily BUMPUSDA_RS03010 PF01678 Diaminopimelate epimerase BUMPUSDA_RS03015 PF01491 Frataxin-like domain BUMPUSDA_RS03020 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BUMPUSDA_RS03020 PF03900 Porphobilinogen deaminase, C-terminal domain BUMPUSDA_RS03025 PF02602 Uroporphyrinogen-III synthase HemD BUMPUSDA_RS03045 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BUMPUSDA_RS03045 PF07497 Rho termination factor, RNA-binding domain BUMPUSDA_RS03045 PF07498 Rho termination factor, N-terminal domain BUMPUSDA_RS03050 PF00085 Thioredoxin BUMPUSDA_RS03055 PF00580 UvrD/REP helicase N-terminal domain BUMPUSDA_RS03055 PF13361 UvrD-like helicase C-terminal domain BUMPUSDA_RS03060 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BUMPUSDA_RS03060 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain BUMPUSDA_RS03065 PF00920 Dehydratase family BUMPUSDA_RS03075 PF00266 Aminotransferase class-V BUMPUSDA_RS03080 PF01592 NifU-like N terminal domain BUMPUSDA_RS03090 PF00012 Hsp70 protein BUMPUSDA_RS03095 PF00111 2Fe-2S iron-sulfur cluster binding domain BUMPUSDA_RS03100 PF01926 50S ribosome-binding GTPase BUMPUSDA_RS03100 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BUMPUSDA_RS03105 PF09976 Tetratricopeptide repeat BUMPUSDA_RS03120 PF13932 GidA associated domain 3 BUMPUSDA_RS03150 PF00753 Metallo-beta-lactamase superfamily BUMPUSDA_RS03150 PF16123 BUMPUSDA_RS03150