BUMPUSDA_RS00665 713eed55e705f4b5b9d2f5869ae3179b 369 Pfam PF01702 Queuine tRNA-ribosyltransferase 127 358 5.2E-84 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 BUMPUSDA_RS00665 713eed55e705f4b5b9d2f5869ae3179b 369 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 359 52.945 T 23-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 BUMPUSDA_RS00665 713eed55e705f4b5b9d2f5869ae3179b 369 PANTHER PTHR21148 1 368 5.9E-156 T 23-04-2016 BUMPUSDA_RS00665 713eed55e705f4b5b9d2f5869ae3179b 369 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 366 5.4E-162 T 23-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 BUMPUSDA_RS00665 713eed55e705f4b5b9d2f5869ae3179b 369 Gene3D G3DSA:3.20.20.105 1 365 1.0E-150 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 BUMPUSDA_RS00665 713eed55e705f4b5b9d2f5869ae3179b 369 SUPERFAMILY SSF51713 1 364 4.45E-145 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 BUMPUSDA_RS00665 713eed55e705f4b5b9d2f5869ae3179b 369 PANTHER PTHR21148:SF26 1 368 5.9E-156 T 23-04-2016 BUMPUSDA_RS00665 713eed55e705f4b5b9d2f5869ae3179b 369 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 367 3.0E-152 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 BUMPUSDA_RS02375 d0dbb57b5f2a836b43486723dc4d4f77 114 Pfam PF04358 DsrC like protein 11 114 2.7E-39 T 23-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE BUMPUSDA_RS02375 d0dbb57b5f2a836b43486723dc4d4f77 114 Gene3D G3DSA:1.10.10.370 44 114 1.6E-30 T 23-04-2016 BUMPUSDA_RS02375 d0dbb57b5f2a836b43486723dc4d4f77 114 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 9 114 6.2E-44 T 23-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE BUMPUSDA_RS02375 d0dbb57b5f2a836b43486723dc4d4f77 114 SUPERFAMILY SSF69721 4 114 4.45E-36 T 23-04-2016 IPR025526 DsrC-like domain BUMPUSDA_RS02375 d0dbb57b5f2a836b43486723dc4d4f77 114 PIRSF PIRSF006223 2 114 1.9E-42 T 23-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE BUMPUSDA_RS02375 d0dbb57b5f2a836b43486723dc4d4f77 114 PANTHER PTHR37010:SF1 13 114 3.8E-40 T 23-04-2016 BUMPUSDA_RS02375 d0dbb57b5f2a836b43486723dc4d4f77 114 PANTHER PTHR37010 13 114 3.8E-40 T 23-04-2016 BUMPUSDA_RS02375 d0dbb57b5f2a836b43486723dc4d4f77 114 Gene3D G3DSA:3.30.1420.10 13 43 1.5E-5 T 23-04-2016 BUMPUSDA_RS02000 bb3467acac036ec7ec5abfc5eb0cf140 175 Gene3D G3DSA:2.30.30.240 104 174 7.6E-17 T 23-04-2016 BUMPUSDA_RS02000 bb3467acac036ec7ec5abfc5eb0cf140 175 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 12 175 18.876 T 23-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 BUMPUSDA_RS02000 bb3467acac036ec7ec5abfc5eb0cf140 175 Gene3D G3DSA:2.40.30.60 8 97 8.3E-26 T 23-04-2016 IPR002676 RimM protein GO:0006364 BUMPUSDA_RS02000 bb3467acac036ec7ec5abfc5eb0cf140 175 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 13 175 2.5E-49 T 23-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 BUMPUSDA_RS02000 bb3467acac036ec7ec5abfc5eb0cf140 175 Pfam PF01782 RimM N-terminal domain 15 94 8.1E-21 T 23-04-2016 IPR002676 RimM protein GO:0006364 BUMPUSDA_RS02000 bb3467acac036ec7ec5abfc5eb0cf140 175 SUPERFAMILY SSF50447 13 97 3.43E-19 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain BUMPUSDA_RS02000 bb3467acac036ec7ec5abfc5eb0cf140 175 Pfam PF05239 PRC-barrel domain 102 162 7.6E-7 T 23-04-2016 IPR027275 PRC-barrel domain BUMPUSDA_RS02000 bb3467acac036ec7ec5abfc5eb0cf140 175 SUPERFAMILY SSF50346 104 174 3.14E-13 T 23-04-2016 IPR011033 PRC-barrel-like BUMPUSDA_RS02000 bb3467acac036ec7ec5abfc5eb0cf140 175 PANTHER PTHR33692 1 174 9.6E-37 T 23-04-2016 BUMPUSDA_RS02000 bb3467acac036ec7ec5abfc5eb0cf140 175 PANTHER PTHR33692:SF1 1 174 9.6E-37 T 23-04-2016 BUMPUSDA_RS01295 3b1d26740bdd80a6e107a10b3a12e553 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 24.116 T 23-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 BUMPUSDA_RS01295 3b1d26740bdd80a6e107a10b3a12e553 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 117 8.1E-17 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 BUMPUSDA_RS01295 3b1d26740bdd80a6e107a10b3a12e553 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 126 6.2E-28 T 23-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 BUMPUSDA_RS01295 3b1d26740bdd80a6e107a10b3a12e553 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 125 1.0E-28 T 23-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 BUMPUSDA_RS01295 3b1d26740bdd80a6e107a10b3a12e553 126 SUPERFAMILY SSF56214 3 125 6.41E-24 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 BUMPUSDA_RS01295 3b1d26740bdd80a6e107a10b3a12e553 126 Gene3D G3DSA:3.90.470.20 1 125 2.3E-33 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 BUMPUSDA_RS01295 3b1d26740bdd80a6e107a10b3a12e553 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 3 126 2.9E-34 T 23-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 BUMPUSDA_RS00475 a94e8d494128e1bd288c0fb36291a1a6 376 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 374 1.4E-169 T 23-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 BUMPUSDA_RS00475 a94e8d494128e1bd288c0fb36291a1a6 376 Gene3D G3DSA:3.30.70.360 189 289 1.5E-30 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain BUMPUSDA_RS00475 a94e8d494128e1bd288c0fb36291a1a6 376 Pfam PF01546 Peptidase family M20/M25/M40 64 372 7.3E-35 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 BUMPUSDA_RS00475 a94e8d494128e1bd288c0fb36291a1a6 376 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 3 376 49.304 T 23-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 BUMPUSDA_RS00475 a94e8d494128e1bd288c0fb36291a1a6 376 Pfam PF07687 Peptidase dimerisation domain 176 282 9.2E-23 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain BUMPUSDA_RS00475 a94e8d494128e1bd288c0fb36291a1a6 376 Gene3D G3DSA:3.40.630.10 5 188 1.3E-69 T 23-04-2016 BUMPUSDA_RS00475 a94e8d494128e1bd288c0fb36291a1a6 376 Gene3D G3DSA:3.40.630.10 317 374 1.3E-69 T 23-04-2016 BUMPUSDA_RS00475 a94e8d494128e1bd288c0fb36291a1a6 376 SUPERFAMILY SSF55031 180 288 1.03E-25 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain BUMPUSDA_RS00475 a94e8d494128e1bd288c0fb36291a1a6 376 PANTHER PTHR11014 5 375 3.3E-78 T 23-04-2016 BUMPUSDA_RS00475 a94e8d494128e1bd288c0fb36291a1a6 376 SUPERFAMILY SSF53187 6 179 2.73E-58 T 23-04-2016 BUMPUSDA_RS00475 a94e8d494128e1bd288c0fb36291a1a6 376 SUPERFAMILY SSF53187 293 374 2.73E-58 T 23-04-2016 BUMPUSDA_RS00475 a94e8d494128e1bd288c0fb36291a1a6 376 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 98 137 - T 23-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 BUMPUSDA_RS00575 ab8ff46320378be2352e5ccd063e7f4e 495 Pfam PF12838 4Fe-4S dicluster domain 357 409 1.0E-9 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BUMPUSDA_RS00575 ab8ff46320378be2352e5ccd063e7f4e 495 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 357 368 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BUMPUSDA_RS00575 ab8ff46320378be2352e5ccd063e7f4e 495 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 396 407 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BUMPUSDA_RS00575 ab8ff46320378be2352e5ccd063e7f4e 495 PANTHER PTHR11780 17 462 1.0E-121 T 23-04-2016 BUMPUSDA_RS00575 ab8ff46320378be2352e5ccd063e7f4e 495 SUPERFAMILY SSF54862 352 432 4.1E-16 T 23-04-2016 BUMPUSDA_RS00575 ab8ff46320378be2352e5ccd063e7f4e 495 PANTHER PTHR11780:SF1 17 462 1.0E-121 T 23-04-2016 BUMPUSDA_RS00575 ab8ff46320378be2352e5ccd063e7f4e 495 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 119 263 4.0E-41 T 23-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain BUMPUSDA_RS00575 ab8ff46320378be2352e5ccd063e7f4e 495 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 12 425 1.4E-120 T 23-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 BUMPUSDA_RS00575 ab8ff46320378be2352e5ccd063e7f4e 495 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 495 109.198 T 23-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 BUMPUSDA_RS00575 ab8ff46320378be2352e5ccd063e7f4e 495 SUPERFAMILY SSF142019 87 281 1.57E-46 T 23-04-2016 BUMPUSDA_RS00575 ab8ff46320378be2352e5ccd063e7f4e 495 Pfam PF13375 RnfC Barrel sandwich hybrid domain 7 92 3.5E-8 T 23-04-2016 IPR026902 RnfC Barrel sandwich hybrid domain BUMPUSDA_RS00575 ab8ff46320378be2352e5ccd063e7f4e 495 Gene3D G3DSA:1.10.1060.10 340 424 1.0E-16 T 23-04-2016 BUMPUSDA_RS01435 5f636e899e632747c55035e01c890d95 855 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 302 316 - T 23-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 BUMPUSDA_RS01435 5f636e899e632747c55035e01c890d95 855 Gene3D G3DSA:2.20.25.10 798 854 2.8E-23 T 23-04-2016 BUMPUSDA_RS01435 5f636e899e632747c55035e01c890d95 855 Pfam PF01131 DNA topoisomerase 150 555 1.6E-112 T 23-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BUMPUSDA_RS01435 5f636e899e632747c55035e01c890d95 855 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 99 112 1.7E-33 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 BUMPUSDA_RS01435 5f636e899e632747c55035e01c890d95 855 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 184 202 1.7E-33 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 BUMPUSDA_RS01435 5f636e899e632747c55035e01c890d95 855 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 481 495 1.7E-33 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 BUMPUSDA_RS01435 5f636e899e632747c55035e01c890d95 855 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 307 316 1.7E-33 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 BUMPUSDA_RS01435 5f636e899e632747c55035e01c890d95 855 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 383 399 1.7E-33 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 BUMPUSDA_RS01435 5f636e899e632747c55035e01c890d95 855 Pfam PF01751 Toprim domain 5 135 1.1E-29 T 23-04-2016 IPR006171 Toprim domain BUMPUSDA_RS01435 5f636e899e632747c55035e01c890d95 855 SUPERFAMILY SSF57783 735 797 5.61E-15 T 23-04-2016 BUMPUSDA_RS01435 5f636e899e632747c55035e01c890d95 855 SMART SM00436 126 214 3.1E-42 T 23-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 BUMPUSDA_RS01435 5f636e899e632747c55035e01c890d95 855 SUPERFAMILY SSF56712 3 599 3.14E-181 T 23-04-2016 IPR023405 DNA topoisomerase, type IA, core domain BUMPUSDA_RS01435 5f636e899e632747c55035e01c890d95 855 Gene3D G3DSA:1.10.460.10 465 569 4.1E-54 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 BUMPUSDA_RS01435 5f636e899e632747c55035e01c890d95 855 Gene3D G3DSA:1.10.460.10 157 204 4.1E-54 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 BUMPUSDA_RS01435 5f636e899e632747c55035e01c890d95 855 PANTHER PTHR11390 61 766 3.6E-304 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 BUMPUSDA_RS01435 5f636e899e632747c55035e01c890d95 855 PANTHER PTHR11390 1 37 3.6E-304 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 BUMPUSDA_RS01435 5f636e899e632747c55035e01c890d95 855 SMART SM00493 3 125 9.5E-27 T 23-04-2016 IPR006171 Toprim domain BUMPUSDA_RS01435 5f636e899e632747c55035e01c890d95 855 SUPERFAMILY SSF57783 799 854 4.08E-19 T 23-04-2016 BUMPUSDA_RS01435 5f636e899e632747c55035e01c890d95 855 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 713 49.88 T 23-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 BUMPUSDA_RS01435 5f636e899e632747c55035e01c890d95 855 Gene3D G3DSA:3.30.65.10 697 733 8.0E-7 T 23-04-2016 BUMPUSDA_RS01435 5f636e899e632747c55035e01c890d95 855 Gene3D G3DSA:3.30.65.10 581 632 1.9E-7 T 23-04-2016 BUMPUSDA_RS01435 5f636e899e632747c55035e01c890d95 855 Gene3D G3DSA:3.30.65.10 735 795 3.5E-17 T 23-04-2016 BUMPUSDA_RS01435 5f636e899e632747c55035e01c890d95 855 Gene3D G3DSA:2.70.20.10 331 464 3.9E-16 T 23-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 BUMPUSDA_RS01435 5f636e899e632747c55035e01c890d95 855 Gene3D G3DSA:2.70.20.10 206 326 9.6E-24 T 23-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 BUMPUSDA_RS01435 5f636e899e632747c55035e01c890d95 855 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 624 1.5E-214 T 23-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 BUMPUSDA_RS01435 5f636e899e632747c55035e01c890d95 855 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 589 613 0.02 T 23-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 BUMPUSDA_RS01435 5f636e899e632747c55035e01c890d95 855 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 699 733 1.9E-5 T 23-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 BUMPUSDA_RS01435 5f636e899e632747c55035e01c890d95 855 SMART SM00437 265 518 3.7E-95 T 23-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 BUMPUSDA_RS01435 5f636e899e632747c55035e01c890d95 855 Pfam PF08272 Topoisomerase I zinc-ribbon-like 748 783 2.9E-7 T 23-04-2016 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 BUMPUSDA_RS01435 5f636e899e632747c55035e01c890d95 855 Pfam PF08272 Topoisomerase I zinc-ribbon-like 814 851 1.5E-14 T 23-04-2016 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 BUMPUSDA_RS01435 5f636e899e632747c55035e01c890d95 855 PANTHER PTHR11390:SF27 61 766 3.6E-304 T 23-04-2016 BUMPUSDA_RS01435 5f636e899e632747c55035e01c890d95 855 PANTHER PTHR11390:SF27 1 37 3.6E-304 T 23-04-2016 BUMPUSDA_RS01435 5f636e899e632747c55035e01c890d95 855 Gene3D G3DSA:3.40.50.140 1 155 1.7E-50 T 23-04-2016 IPR006171 Toprim domain BUMPUSDA_RS01675 747f35b10c002a32f12f293cbbf5ebf5 265 Pfam PF08468 Methyltransferase small domain N-terminal 4 89 1.1E-27 T 23-04-2016 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 BUMPUSDA_RS01675 747f35b10c002a32f12f293cbbf5ebf5 265 SUPERFAMILY SSF53335 76 258 5.28E-28 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BUMPUSDA_RS01675 747f35b10c002a32f12f293cbbf5ebf5 265 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 193 199 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BUMPUSDA_RS01675 747f35b10c002a32f12f293cbbf5ebf5 265 PANTHER PTHR18895:SF70 2 262 2.7E-67 T 23-04-2016 BUMPUSDA_RS01675 747f35b10c002a32f12f293cbbf5ebf5 265 Pfam PF05175 Methyltransferase small domain 97 261 9.3E-50 T 23-04-2016 IPR007848 Methyltransferase small domain GO:0008168 BUMPUSDA_RS01675 747f35b10c002a32f12f293cbbf5ebf5 265 PANTHER PTHR18895 2 262 2.7E-67 T 23-04-2016 BUMPUSDA_RS01675 747f35b10c002a32f12f293cbbf5ebf5 265 Gene3D G3DSA:3.40.50.150 91 256 8.9E-22 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BUMPUSDA_RS01675 747f35b10c002a32f12f293cbbf5ebf5 265 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 208 232 6.6E-5 T 23-04-2016 BUMPUSDA_RS01675 747f35b10c002a32f12f293cbbf5ebf5 265 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 190 202 6.6E-5 T 23-04-2016 BUMPUSDA_RS01675 747f35b10c002a32f12f293cbbf5ebf5 265 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 128 142 6.6E-5 T 23-04-2016 BUMPUSDA_RS00550 9b5e755f33c507ba96f8d324f09357e4 441 PANTHER PTHR11807 2 437 5.4E-69 T 23-04-2016 BUMPUSDA_RS00550 9b5e755f33c507ba96f8d324f09357e4 441 PANTHER PTHR11807:SF2 2 437 5.4E-69 T 23-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BUMPUSDA_RS00550 9b5e755f33c507ba96f8d324f09357e4 441 SMART SM00977 356 426 1.2E-17 T 23-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BUMPUSDA_RS00550 9b5e755f33c507ba96f8d324f09357e4 441 SUPERFAMILY SSF82829 226 310 3.92E-21 T 23-04-2016 BUMPUSDA_RS00550 9b5e755f33c507ba96f8d324f09357e4 441 SUPERFAMILY SSF52402 8 224 1.68E-61 T 23-04-2016 BUMPUSDA_RS00550 9b5e755f33c507ba96f8d324f09357e4 441 Pfam PF01171 PP-loop family 14 192 5.2E-56 T 23-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal BUMPUSDA_RS00550 9b5e755f33c507ba96f8d324f09357e4 441 Gene3D G3DSA:3.40.50.620 2 171 2.5E-14 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BUMPUSDA_RS00550 9b5e755f33c507ba96f8d324f09357e4 441 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 356 401 3.1E-17 T 23-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BUMPUSDA_RS00550 9b5e755f33c507ba96f8d324f09357e4 441 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 14 195 1.1E-54 T 23-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BUMPUSDA_RS00550 9b5e755f33c507ba96f8d324f09357e4 441 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 2 302 22.292 T 23-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BUMPUSDA_RS00550 9b5e755f33c507ba96f8d324f09357e4 441 SUPERFAMILY SSF56037 319 428 1.91E-25 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 BUMPUSDA_RS00550 9b5e755f33c507ba96f8d324f09357e4 441 Pfam PF09179 TilS substrate binding domain 240 307 2.6E-13 T 23-04-2016 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BUMPUSDA_RS00550 9b5e755f33c507ba96f8d324f09357e4 441 Pfam PF11734 TilS substrate C-terminal domain 357 426 1.7E-19 T 23-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BUMPUSDA_RS01325 11a14d34287d6c020962312df2e020a3 369 Gene3D G3DSA:2.30.30.280 214 280 5.0E-28 T 23-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 BUMPUSDA_RS01325 11a14d34287d6c020962312df2e020a3 369 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 363 37.257 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 BUMPUSDA_RS01325 11a14d34287d6c020962312df2e020a3 369 Gene3D G3DSA:3.40.50.620 4 212 6.0E-90 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BUMPUSDA_RS01325 11a14d34287d6c020962312df2e020a3 369 Gene3D G3DSA:2.40.30.10 283 365 2.9E-25 T 23-04-2016 BUMPUSDA_RS01325 11a14d34287d6c020962312df2e020a3 369 Pfam PF03054 tRNA methyl transferase 7 362 2.3E-135 T 23-04-2016 BUMPUSDA_RS01325 11a14d34287d6c020962312df2e020a3 369 SUPERFAMILY SSF52402 4 245 5.07E-53 T 23-04-2016 BUMPUSDA_RS01325 11a14d34287d6c020962312df2e020a3 369 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 7 362 8.2E-136 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 BUMPUSDA_RS01325 11a14d34287d6c020962312df2e020a3 369 PANTHER PTHR11933 1 367 4.2E-175 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 BUMPUSDA_RS01325 11a14d34287d6c020962312df2e020a3 369 PANTHER PTHR11933:SF10 1 367 4.2E-175 T 23-04-2016 BUMPUSDA_RS01210 a2eaa098293437bf06bc094f9381496d 572 PANTHER PTHR11451 4 244 7.8E-140 T 23-04-2016 BUMPUSDA_RS01210 a2eaa098293437bf06bc094f9381496d 572 PANTHER PTHR11451 399 572 7.8E-140 T 23-04-2016 BUMPUSDA_RS01210 a2eaa098293437bf06bc094f9381496d 572 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 96 459 2.2E-38 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS01210 a2eaa098293437bf06bc094f9381496d 572 SUPERFAMILY SSF55826 241 397 3.14E-16 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 BUMPUSDA_RS01210 a2eaa098293437bf06bc094f9381496d 572 Pfam PF04073 Aminoacyl-tRNA editing domain 268 376 1.2E-13 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 BUMPUSDA_RS01210 a2eaa098293437bf06bc094f9381496d 572 SUPERFAMILY SSF55681 407 478 1.81E-97 T 23-04-2016 BUMPUSDA_RS01210 a2eaa098293437bf06bc094f9381496d 572 SUPERFAMILY SSF55681 10 237 1.81E-97 T 23-04-2016 BUMPUSDA_RS01210 a2eaa098293437bf06bc094f9381496d 572 Gene3D G3DSA:3.90.960.10 241 388 1.8E-15 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 BUMPUSDA_RS01210 a2eaa098293437bf06bc094f9381496d 572 PANTHER PTHR11451:SF3 4 244 7.8E-140 T 23-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 BUMPUSDA_RS01210 a2eaa098293437bf06bc094f9381496d 572 PANTHER PTHR11451:SF3 399 572 7.8E-140 T 23-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 BUMPUSDA_RS01210 a2eaa098293437bf06bc094f9381496d 572 Pfam PF03129 Anticodon binding domain 475 568 6.1E-17 T 23-04-2016 IPR004154 Anticodon-binding BUMPUSDA_RS01210 a2eaa098293437bf06bc094f9381496d 572 Gene3D G3DSA:3.40.50.800 468 571 1.4E-27 T 23-04-2016 IPR004154 Anticodon-binding BUMPUSDA_RS01210 a2eaa098293437bf06bc094f9381496d 572 Gene3D G3DSA:3.30.930.10 1 228 1.1E-96 T 23-04-2016 BUMPUSDA_RS01210 a2eaa098293437bf06bc094f9381496d 572 Gene3D G3DSA:3.30.930.10 407 467 1.1E-96 T 23-04-2016 BUMPUSDA_RS01210 a2eaa098293437bf06bc094f9381496d 572 SUPERFAMILY SSF52954 463 571 3.78E-29 T 23-04-2016 IPR004154 Anticodon-binding BUMPUSDA_RS01210 a2eaa098293437bf06bc094f9381496d 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 1.3E-16 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 BUMPUSDA_RS01210 a2eaa098293437bf06bc094f9381496d 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 1.3E-16 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 BUMPUSDA_RS01210 a2eaa098293437bf06bc094f9381496d 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 1.3E-16 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 BUMPUSDA_RS01210 a2eaa098293437bf06bc094f9381496d 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 1.3E-16 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 BUMPUSDA_RS01210 a2eaa098293437bf06bc094f9381496d 572 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 567 1.0E-201 T 23-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 BUMPUSDA_RS01210 a2eaa098293437bf06bc094f9381496d 572 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 36.671 T 23-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 BUMPUSDA_RS01130 3b50d2f685be39913f2c7a2ed03105b1 312 SUPERFAMILY SSF81799 114 213 3.79E-32 T 23-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 BUMPUSDA_RS01130 3b50d2f685be39913f2c7a2ed03105b1 312 Gene3D G3DSA:1.10.150.170 113 215 1.8E-33 T 23-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 BUMPUSDA_RS01130 3b50d2f685be39913f2c7a2ed03105b1 312 Pfam PF01795 MraW methylase family 5 309 6.6E-105 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 BUMPUSDA_RS01130 3b50d2f685be39913f2c7a2ed03105b1 312 PANTHER PTHR11265:SF0 5 312 5.1E-128 T 23-04-2016 BUMPUSDA_RS01130 3b50d2f685be39913f2c7a2ed03105b1 312 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 3 309 9.7E-110 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 BUMPUSDA_RS01130 3b50d2f685be39913f2c7a2ed03105b1 312 PIRSF PIRSF004486 1 312 1.3E-100 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 BUMPUSDA_RS01130 3b50d2f685be39913f2c7a2ed03105b1 312 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 311 35.915 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 BUMPUSDA_RS01130 3b50d2f685be39913f2c7a2ed03105b1 312 PANTHER PTHR11265 5 312 5.1E-128 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 BUMPUSDA_RS01130 3b50d2f685be39913f2c7a2ed03105b1 312 Gene3D G3DSA:3.40.50.150 216 309 2.2E-45 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BUMPUSDA_RS01130 3b50d2f685be39913f2c7a2ed03105b1 312 Gene3D G3DSA:3.40.50.150 7 110 2.2E-45 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BUMPUSDA_RS01130 3b50d2f685be39913f2c7a2ed03105b1 312 SUPERFAMILY SSF53335 7 113 2.41E-37 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BUMPUSDA_RS01130 3b50d2f685be39913f2c7a2ed03105b1 312 SUPERFAMILY SSF53335 213 309 2.41E-37 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BUMPUSDA_RS02440 90efbad00b09a56e381554afc7d49ce4 581 PANTHER PTHR24221 6 581 1.4E-176 T 23-04-2016 BUMPUSDA_RS02440 90efbad00b09a56e381554afc7d49ce4 581 Pfam PF00005 ABC transporter 352 500 1.1E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BUMPUSDA_RS02440 90efbad00b09a56e381554afc7d49ce4 581 SMART SM00382 361 548 1.7E-17 T 23-04-2016 IPR003593 AAA+ ATPase domain BUMPUSDA_RS02440 90efbad00b09a56e381554afc7d49ce4 581 SUPERFAMILY SSF90123 7 317 1.44E-66 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 BUMPUSDA_RS02440 90efbad00b09a56e381554afc7d49ce4 581 Gene3D G3DSA:3.40.50.300 342 566 1.9E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02440 90efbad00b09a56e381554afc7d49ce4 581 Gene3D G3DSA:1.20.1560.10 7 318 3.0E-64 T 23-04-2016 BUMPUSDA_RS02440 90efbad00b09a56e381554afc7d49ce4 581 PANTHER PTHR24221:SF202 6 581 1.4E-176 T 23-04-2016 BUMPUSDA_RS02440 90efbad00b09a56e381554afc7d49ce4 581 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BUMPUSDA_RS02440 90efbad00b09a56e381554afc7d49ce4 581 Pfam PF00664 ABC transporter transmembrane region 20 291 7.9E-36 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 BUMPUSDA_RS02440 90efbad00b09a56e381554afc7d49ce4 581 SUPERFAMILY SSF52540 331 572 5.66E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01605 c59d6b0e518071865c34ddcd52cd7134 588 SUPERFAMILY SSF55681 407 557 4.58E-100 T 23-04-2016 BUMPUSDA_RS01605 c59d6b0e518071865c34ddcd52cd7134 588 SUPERFAMILY SSF55681 119 310 4.58E-100 T 23-04-2016 BUMPUSDA_RS01605 c59d6b0e518071865c34ddcd52cd7134 588 SUPERFAMILY SSF50249 1 105 2.91E-27 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS01605 c59d6b0e518071865c34ddcd52cd7134 588 Gene3D G3DSA:2.40.50.140 1 106 4.2E-32 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS01605 c59d6b0e518071865c34ddcd52cd7134 588 SUPERFAMILY SSF55261 288 419 1.8E-36 T 23-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 BUMPUSDA_RS01605 c59d6b0e518071865c34ddcd52cd7134 588 Pfam PF02938 GAD domain 308 406 1.4E-20 T 23-04-2016 IPR029351 GAD domain BUMPUSDA_RS01605 c59d6b0e518071865c34ddcd52cd7134 588 Pfam PF01336 OB-fold nucleic acid binding domain 18 96 1.6E-13 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 BUMPUSDA_RS01605 c59d6b0e518071865c34ddcd52cd7134 588 Gene3D G3DSA:3.30.930.10 415 584 3.0E-109 T 23-04-2016 BUMPUSDA_RS01605 c59d6b0e518071865c34ddcd52cd7134 588 Gene3D G3DSA:3.30.930.10 136 275 3.0E-109 T 23-04-2016 BUMPUSDA_RS01605 c59d6b0e518071865c34ddcd52cd7134 588 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 586 2.1E-237 T 23-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 BUMPUSDA_RS01605 c59d6b0e518071865c34ddcd52cd7134 588 Gene3D G3DSA:3.30.1360.30 276 414 3.6E-39 T 23-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 BUMPUSDA_RS01605 c59d6b0e518071865c34ddcd52cd7134 588 PANTHER PTHR22594:SF5 370 571 6.5E-235 T 23-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 BUMPUSDA_RS01605 c59d6b0e518071865c34ddcd52cd7134 588 PANTHER PTHR22594:SF5 1 296 6.5E-235 T 23-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 BUMPUSDA_RS01605 c59d6b0e518071865c34ddcd52cd7134 588 PANTHER PTHR22594 370 571 6.5E-235 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS01605 c59d6b0e518071865c34ddcd52cd7134 588 PANTHER PTHR22594 1 296 6.5E-235 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS01605 c59d6b0e518071865c34ddcd52cd7134 588 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 1 563 35.133 T 23-04-2016 BUMPUSDA_RS01605 c59d6b0e518071865c34ddcd52cd7134 588 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 558 2.0E-105 T 23-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS01605 c59d6b0e518071865c34ddcd52cd7134 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 8.0E-27 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS01605 c59d6b0e518071865c34ddcd52cd7134 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 8.0E-27 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS01605 c59d6b0e518071865c34ddcd52cd7134 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 8.0E-27 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS01605 c59d6b0e518071865c34ddcd52cd7134 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 8.0E-27 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS02920 7be85a7e0b01849bf92df24d540f993b 549 Gene3D G3DSA:3.40.50.10490 9 98 1.2E-134 T 23-04-2016 BUMPUSDA_RS02920 7be85a7e0b01849bf92df24d540f993b 549 Gene3D G3DSA:3.40.50.10490 293 506 1.2E-134 T 23-04-2016 BUMPUSDA_RS02920 7be85a7e0b01849bf92df24d540f993b 549 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 265 278 - T 23-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 BUMPUSDA_RS02920 7be85a7e0b01849bf92df24d540f993b 549 PANTHER PTHR11469 1 549 0.0 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 BUMPUSDA_RS02920 7be85a7e0b01849bf92df24d540f993b 549 Gene3D G3DSA:1.10.1390.10 507 546 1.7E-17 T 23-04-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 BUMPUSDA_RS02920 7be85a7e0b01849bf92df24d540f993b 549 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 46 524 40.073 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 BUMPUSDA_RS02920 7be85a7e0b01849bf92df24d540f993b 549 SUPERFAMILY SSF53697 6 546 1.42E-203 T 23-04-2016 BUMPUSDA_RS02920 7be85a7e0b01849bf92df24d540f993b 549 Gene3D G3DSA:3.40.50.10490 99 291 3.1E-77 T 23-04-2016 BUMPUSDA_RS02920 7be85a7e0b01849bf92df24d540f993b 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 150 169 2.8E-53 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 BUMPUSDA_RS02920 7be85a7e0b01849bf92df24d540f993b 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 338 359 2.8E-53 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 BUMPUSDA_RS02920 7be85a7e0b01849bf92df24d540f993b 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 465 483 2.8E-53 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 BUMPUSDA_RS02920 7be85a7e0b01849bf92df24d540f993b 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 261 279 2.8E-53 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 BUMPUSDA_RS02920 7be85a7e0b01849bf92df24d540f993b 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 483 497 2.8E-53 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 BUMPUSDA_RS02920 7be85a7e0b01849bf92df24d540f993b 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 497 510 2.8E-53 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 BUMPUSDA_RS02920 7be85a7e0b01849bf92df24d540f993b 549 Pfam PF00342 Phosphoglucose isomerase 52 541 6.6E-226 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 BUMPUSDA_RS02920 7be85a7e0b01849bf92df24d540f993b 549 PANTHER PTHR11469:SF11 1 549 0.0 T 23-04-2016 BUMPUSDA_RS02920 7be85a7e0b01849bf92df24d540f993b 549 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 497 514 - T 23-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 BUMPUSDA_RS02185 17d281b3dff6442ad7da336c85378cf7 803 Pfam PF05188 MutS domain II 135 260 5.1E-22 T 23-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 BUMPUSDA_RS02185 17d281b3dff6442ad7da336c85378cf7 803 Gene3D G3DSA:1.10.1420.10 272 472 2.7E-39 T 23-04-2016 BUMPUSDA_RS02185 17d281b3dff6442ad7da336c85378cf7 803 Pfam PF05190 MutS family domain IV 432 519 7.4E-19 T 23-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 BUMPUSDA_RS02185 17d281b3dff6442ad7da336c85378cf7 803 Pfam PF05192 MutS domain III 276 562 9.0E-32 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 BUMPUSDA_RS02185 17d281b3dff6442ad7da336c85378cf7 803 Pfam PF00488 MutS domain V 614 800 1.4E-80 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 BUMPUSDA_RS02185 17d281b3dff6442ad7da336c85378cf7 803 Gene3D G3DSA:3.40.1170.10 7 128 2.5E-44 T 23-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 BUMPUSDA_RS02185 17d281b3dff6442ad7da336c85378cf7 803 Gene3D G3DSA:3.40.50.300 571 801 6.9E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02185 17d281b3dff6442ad7da336c85378cf7 803 PANTHER PTHR11361 9 802 3.9E-303 T 23-04-2016 BUMPUSDA_RS02185 17d281b3dff6442ad7da336c85378cf7 803 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 13 803 21.791 T 23-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 BUMPUSDA_RS02185 17d281b3dff6442ad7da336c85378cf7 803 SMART SM00534 611 798 9.4E-104 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 BUMPUSDA_RS02185 17d281b3dff6442ad7da336c85378cf7 803 SMART SM00533 290 595 1.8E-65 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 BUMPUSDA_RS02185 17d281b3dff6442ad7da336c85378cf7 803 SUPERFAMILY SSF48334 275 570 3.92E-72 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 BUMPUSDA_RS02185 17d281b3dff6442ad7da336c85378cf7 803 Gene3D G3DSA:3.30.420.110 133 263 1.2E-30 T 23-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 BUMPUSDA_RS02185 17d281b3dff6442ad7da336c85378cf7 803 PANTHER PTHR11361:SF86 9 802 3.9E-303 T 23-04-2016 BUMPUSDA_RS02185 17d281b3dff6442ad7da336c85378cf7 803 PIRSF PIRSF037677 6 803 4.3E-134 T 23-04-2016 BUMPUSDA_RS02185 17d281b3dff6442ad7da336c85378cf7 803 SUPERFAMILY SSF53150 121 271 4.45E-34 T 23-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 BUMPUSDA_RS02185 17d281b3dff6442ad7da336c85378cf7 803 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 692 708 - T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 BUMPUSDA_RS02185 17d281b3dff6442ad7da336c85378cf7 803 Pfam PF01624 MutS domain I 14 126 1.3E-39 T 23-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 BUMPUSDA_RS02185 17d281b3dff6442ad7da336c85378cf7 803 SUPERFAMILY SSF52540 571 802 1.98E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02185 17d281b3dff6442ad7da336c85378cf7 803 SUPERFAMILY SSF55271 6 122 3.27E-39 T 23-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 BUMPUSDA_RS02185 17d281b3dff6442ad7da336c85378cf7 803 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 13 802 7.0E-285 T 23-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 BUMPUSDA_RS02800 699a5ee13b4c7bc184671689c7d48a85 208 SUPERFAMILY SSF51419 5 206 6.4E-57 T 23-04-2016 IPR029066 PLP-binding barrel BUMPUSDA_RS02800 699a5ee13b4c7bc184671689c7d48a85 208 Gene3D G3DSA:3.20.20.10 5 206 2.1E-56 T 23-04-2016 IPR029066 PLP-binding barrel BUMPUSDA_RS02800 699a5ee13b4c7bc184671689c7d48a85 208 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 3 207 1.6E-57 T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 BUMPUSDA_RS02800 699a5ee13b4c7bc184671689c7d48a85 208 Pfam PF01168 Alanine racemase, N-terminal domain 24 206 1.5E-19 T 23-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 BUMPUSDA_RS02800 699a5ee13b4c7bc184671689c7d48a85 208 PIRSF PIRSF004848 1 208 2.0E-60 T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 BUMPUSDA_RS02800 699a5ee13b4c7bc184671689c7d48a85 208 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 59 73 - T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 BUMPUSDA_RS02800 699a5ee13b4c7bc184671689c7d48a85 208 PANTHER PTHR10146:SF0 7 206 8.5E-52 T 23-04-2016 BUMPUSDA_RS02800 699a5ee13b4c7bc184671689c7d48a85 208 PANTHER PTHR10146 7 206 8.5E-52 T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 BUMPUSDA_RS00655 92a6706d6102875b819a80c2a4a266f0 100 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 8.4E-16 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 BUMPUSDA_RS00655 92a6706d6102875b819a80c2a4a266f0 100 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 8.4E-16 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 BUMPUSDA_RS00655 92a6706d6102875b819a80c2a4a266f0 100 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 8.4E-16 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 BUMPUSDA_RS00655 92a6706d6102875b819a80c2a4a266f0 100 PANTHER PTHR33175:SF2 3 98 5.0E-45 T 23-04-2016 BUMPUSDA_RS00655 92a6706d6102875b819a80c2a4a266f0 100 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 3 96 9.9E-41 T 23-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 BUMPUSDA_RS00655 92a6706d6102875b819a80c2a4a266f0 100 PANTHER PTHR33175 3 98 5.0E-45 T 23-04-2016 BUMPUSDA_RS00655 92a6706d6102875b819a80c2a4a266f0 100 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 28.499 T 23-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 BUMPUSDA_RS00655 92a6706d6102875b819a80c2a4a266f0 100 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 23-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 BUMPUSDA_RS00655 92a6706d6102875b819a80c2a4a266f0 100 SMART SM00411 3 92 9.3E-38 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 BUMPUSDA_RS00655 92a6706d6102875b819a80c2a4a266f0 100 Gene3D G3DSA:4.10.520.10 2 93 2.3E-34 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 BUMPUSDA_RS00655 92a6706d6102875b819a80c2a4a266f0 100 SUPERFAMILY SSF47729 3 95 3.68E-31 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 BUMPUSDA_RS00655 92a6706d6102875b819a80c2a4a266f0 100 Pfam PF00216 Bacterial DNA-binding protein 3 91 1.0E-29 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 BUMPUSDA_RS00200 4bc4887fb69398b3416f93f515a6479f 181 SMART SM00739 127 154 3.5E-5 T 23-04-2016 IPR005824 KOW BUMPUSDA_RS00200 4bc4887fb69398b3416f93f515a6479f 181 Pfam PF00467 KOW motif 130 162 7.3E-6 T 23-04-2016 IPR005824 KOW BUMPUSDA_RS00200 4bc4887fb69398b3416f93f515a6479f 181 Gene3D G3DSA:2.30.30.30 120 180 3.5E-31 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 BUMPUSDA_RS00200 4bc4887fb69398b3416f93f515a6479f 181 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 3.4E-20 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 BUMPUSDA_RS00200 4bc4887fb69398b3416f93f515a6479f 181 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 3.4E-20 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 BUMPUSDA_RS00200 4bc4887fb69398b3416f93f515a6479f 181 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 3.4E-20 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 BUMPUSDA_RS00200 4bc4887fb69398b3416f93f515a6479f 181 Gene3D G3DSA:3.30.70.940 6 116 1.1E-39 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 BUMPUSDA_RS00200 4bc4887fb69398b3416f93f515a6479f 181 SUPERFAMILY SSF50104 125 180 5.79E-19 T 23-04-2016 IPR008991 Translation protein SH3-like domain BUMPUSDA_RS00200 4bc4887fb69398b3416f93f515a6479f 181 SUPERFAMILY SSF82679 6 115 5.23E-37 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 BUMPUSDA_RS00200 4bc4887fb69398b3416f93f515a6479f 181 Pfam PF02357 Transcription termination factor nusG 7 111 5.3E-26 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 BUMPUSDA_RS00200 4bc4887fb69398b3416f93f515a6479f 181 PANTHER PTHR30265 3 180 2.0E-79 T 23-04-2016 BUMPUSDA_RS00200 4bc4887fb69398b3416f93f515a6479f 181 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 180 5.5E-68 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 BUMPUSDA_RS00200 4bc4887fb69398b3416f93f515a6479f 181 SMART SM00738 6 115 2.1E-44 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 BUMPUSDA_RS00200 4bc4887fb69398b3416f93f515a6479f 181 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 24.44 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 BUMPUSDA_RS00200 4bc4887fb69398b3416f93f515a6479f 181 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 23-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site BUMPUSDA_RS02645 caec94a69c3293025762a8886cf6c9bd 110 PANTHER PTHR13501 1 109 5.6E-48 T 23-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 BUMPUSDA_RS02645 caec94a69c3293025762a8886cf6c9bd 110 SUPERFAMILY SSF54843 1 109 3.01E-41 T 23-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02645 caec94a69c3293025762a8886cf6c9bd 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 23-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02645 caec94a69c3293025762a8886cf6c9bd 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 27.674 T 23-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 BUMPUSDA_RS02645 caec94a69c3293025762a8886cf6c9bd 110 Pfam PF00237 Ribosomal protein L22p/L17e 8 107 2.5E-32 T 23-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02645 caec94a69c3293025762a8886cf6c9bd 110 Gene3D G3DSA:3.90.470.10 1 109 3.1E-41 T 23-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02645 caec94a69c3293025762a8886cf6c9bd 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 8.3E-46 T 23-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 BUMPUSDA_RS02965 74a52872e8f34d2e079803339d4c7ea4 162 PANTHER PTHR11527 39 158 2.3E-19 T 23-04-2016 IPR031107 Small heat shock protein HSP20 BUMPUSDA_RS02965 74a52872e8f34d2e079803339d4c7ea4 162 Gene3D G3DSA:2.60.40.790 15 151 2.8E-16 T 23-04-2016 IPR008978 HSP20-like chaperone BUMPUSDA_RS02965 74a52872e8f34d2e079803339d4c7ea4 162 PANTHER PTHR11527:SF127 39 158 2.3E-19 T 23-04-2016 BUMPUSDA_RS02965 74a52872e8f34d2e079803339d4c7ea4 162 SUPERFAMILY SSF49764 40 151 6.28E-17 T 23-04-2016 IPR008978 HSP20-like chaperone BUMPUSDA_RS02965 74a52872e8f34d2e079803339d4c7ea4 162 Pfam PF00011 Hsp20/alpha crystallin family 49 151 1.9E-11 T 23-04-2016 IPR002068 Alpha crystallin/Hsp20 domain BUMPUSDA_RS02585 778e557ea31836827e1bd3d17b8e7971 167 PANTHER PTHR13718 11 165 2.3E-74 T 23-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02585 778e557ea31836827e1bd3d17b8e7971 167 SUPERFAMILY SSF54768 9 77 2.72E-24 T 23-04-2016 BUMPUSDA_RS02585 778e557ea31836827e1bd3d17b8e7971 167 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 164 9.5E-70 T 23-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 BUMPUSDA_RS02585 778e557ea31836827e1bd3d17b8e7971 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 29 61 - T 23-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site BUMPUSDA_RS02585 778e557ea31836827e1bd3d17b8e7971 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 12 76 1.5E-29 T 23-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02585 778e557ea31836827e1bd3d17b8e7971 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 88 158 2.3E-30 T 23-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02585 778e557ea31836827e1bd3d17b8e7971 167 SUPERFAMILY SSF54211 81 159 2.53E-26 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold BUMPUSDA_RS02585 778e557ea31836827e1bd3d17b8e7971 167 Gene3D G3DSA:3.30.160.20 10 73 1.2E-30 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain BUMPUSDA_RS02585 778e557ea31836827e1bd3d17b8e7971 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 164 34.389 T 23-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 BUMPUSDA_RS02585 778e557ea31836827e1bd3d17b8e7971 167 Gene3D G3DSA:3.30.230.10 78 160 1.2E-31 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BUMPUSDA_RS00530 713e4425300e1d6866e592d510772e78 213 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 56 108 3.0E-20 T 23-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 BUMPUSDA_RS00530 713e4425300e1d6866e592d510772e78 213 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 33 105 3.3E-30 T 23-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 BUMPUSDA_RS00530 713e4425300e1d6866e592d510772e78 213 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 8 203 34.478 T 23-04-2016 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19|UniPathway: UPA00031|UniPathway: UPA00031 BUMPUSDA_RS00530 713e4425300e1d6866e592d510772e78 213 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 116 198 1.8E-27 T 23-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 BUMPUSDA_RS00530 713e4425300e1d6866e592d510772e78 213 SUPERFAMILY SSF141734 7 111 1.15E-43 T 23-04-2016 BUMPUSDA_RS00530 713e4425300e1d6866e592d510772e78 213 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 112 198 17.177 T 23-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 BUMPUSDA_RS00530 713e4425300e1d6866e592d510772e78 213 SUPERFAMILY SSF101386 114 201 8.94E-20 T 23-04-2016 BUMPUSDA_RS00530 713e4425300e1d6866e592d510772e78 213 PANTHER PTHR21256 5 202 2.4E-90 T 23-04-2016 BUMPUSDA_RS00530 713e4425300e1d6866e592d510772e78 213 PANTHER PTHR21256:SF16 5 202 2.4E-90 T 23-04-2016 BUMPUSDA_RS00530 713e4425300e1d6866e592d510772e78 213 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 117 202 2.5E-13 T 23-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 BUMPUSDA_RS01955 a7603f481ca05ff114e028c757045a76 417 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 407 4.1E-93 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 BUMPUSDA_RS01955 a7603f481ca05ff114e028c757045a76 417 PANTHER PTHR21090 1 417 3.2E-157 T 23-04-2016 BUMPUSDA_RS01955 a7603f481ca05ff114e028c757045a76 417 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 4.0E-159 T 23-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 BUMPUSDA_RS01955 a7603f481ca05ff114e028c757045a76 417 Gene3D G3DSA:3.65.10.10 21 219 6.0E-55 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 BUMPUSDA_RS01955 a7603f481ca05ff114e028c757045a76 417 Gene3D G3DSA:3.65.10.10 220 415 4.2E-51 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 BUMPUSDA_RS01955 a7603f481ca05ff114e028c757045a76 417 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 41.284 T 23-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 BUMPUSDA_RS01955 a7603f481ca05ff114e028c757045a76 417 SUPERFAMILY SSF55205 1 416 6.54E-123 T 23-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 BUMPUSDA_RS00870 9d3c9be48d301385dbe38174b2335c49 277 Pfam PF13847 Methyltransferase domain 109 251 3.8E-21 T 23-04-2016 IPR025714 Methyltransferase domain BUMPUSDA_RS00870 9d3c9be48d301385dbe38174b2335c49 277 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 1 274 1.4E-81 T 23-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 BUMPUSDA_RS00870 9d3c9be48d301385dbe38174b2335c49 277 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 1 275 40.451 T 23-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 BUMPUSDA_RS00870 9d3c9be48d301385dbe38174b2335c49 277 PANTHER PTHR18895 1 277 5.0E-90 T 23-04-2016 BUMPUSDA_RS00870 9d3c9be48d301385dbe38174b2335c49 277 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 180 186 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BUMPUSDA_RS00870 9d3c9be48d301385dbe38174b2335c49 277 PANTHER PTHR18895:SF64 1 277 5.0E-90 T 23-04-2016 BUMPUSDA_RS00870 9d3c9be48d301385dbe38174b2335c49 277 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 23 271 5.2E-85 T 23-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 BUMPUSDA_RS00870 9d3c9be48d301385dbe38174b2335c49 277 SUPERFAMILY SSF53335 2 273 4.18E-53 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BUMPUSDA_RS00870 9d3c9be48d301385dbe38174b2335c49 277 Gene3D G3DSA:1.10.8.10 1 84 1.1E-21 T 23-04-2016 BUMPUSDA_RS00870 9d3c9be48d301385dbe38174b2335c49 277 Gene3D G3DSA:3.40.50.150 87 273 4.6E-58 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BUMPUSDA_RS01395 0fec23107209eff97d06299a8c3f8eff 247 Pfam PF06790 Uncharacterised protein family (UPF0259) 1 243 5.5E-78 T 23-04-2016 IPR009627 Uncharacterised protein family UPF0259 BUMPUSDA_RS01750 e3ad48df5020846b134e7e215779e9ef 371 PRINTS PR01010 Flagellar P-ring protein signature 61 76 1.0E-84 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BUMPUSDA_RS01750 e3ad48df5020846b134e7e215779e9ef 371 PRINTS PR01010 Flagellar P-ring protein signature 87 106 1.0E-84 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BUMPUSDA_RS01750 e3ad48df5020846b134e7e215779e9ef 371 PRINTS PR01010 Flagellar P-ring protein signature 26 41 1.0E-84 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BUMPUSDA_RS01750 e3ad48df5020846b134e7e215779e9ef 371 PRINTS PR01010 Flagellar P-ring protein signature 167 185 1.0E-84 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BUMPUSDA_RS01750 e3ad48df5020846b134e7e215779e9ef 371 PRINTS PR01010 Flagellar P-ring protein signature 193 211 1.0E-84 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BUMPUSDA_RS01750 e3ad48df5020846b134e7e215779e9ef 371 PRINTS PR01010 Flagellar P-ring protein signature 126 144 1.0E-84 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BUMPUSDA_RS01750 e3ad48df5020846b134e7e215779e9ef 371 PRINTS PR01010 Flagellar P-ring protein signature 41 56 1.0E-84 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BUMPUSDA_RS01750 e3ad48df5020846b134e7e215779e9ef 371 PRINTS PR01010 Flagellar P-ring protein signature 256 268 1.0E-84 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BUMPUSDA_RS01750 e3ad48df5020846b134e7e215779e9ef 371 PRINTS PR01010 Flagellar P-ring protein signature 109 126 1.0E-84 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BUMPUSDA_RS01750 e3ad48df5020846b134e7e215779e9ef 371 PANTHER PTHR30381:SF1 1 371 3.7E-142 T 23-04-2016 BUMPUSDA_RS01750 e3ad48df5020846b134e7e215779e9ef 371 Hamap MF_00416 Flagellar P-ring protein [flgI]. 9 371 35.175 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BUMPUSDA_RS01750 e3ad48df5020846b134e7e215779e9ef 371 PANTHER PTHR30381 1 371 3.7E-142 T 23-04-2016 BUMPUSDA_RS01750 e3ad48df5020846b134e7e215779e9ef 371 Pfam PF02119 Flagellar P-ring protein 26 370 1.4E-116 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 BUMPUSDA_RS00515 17df7c533888494be4a9835d1ea1ab19 196 Pfam PF00117 Glutamine amidotransferase class-I 13 194 2.9E-19 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 BUMPUSDA_RS00515 17df7c533888494be4a9835d1ea1ab19 196 PIRSF PIRSF000495 1 196 1.1E-63 T 23-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 BUMPUSDA_RS00515 17df7c533888494be4a9835d1ea1ab19 196 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 3 196 4.3E-66 T 23-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 BUMPUSDA_RS00515 17df7c533888494be4a9835d1ea1ab19 196 SUPERFAMILY SSF52317 3 195 2.15E-52 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like BUMPUSDA_RS00515 17df7c533888494be4a9835d1ea1ab19 196 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 2 196 32.86 T 23-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 BUMPUSDA_RS00515 17df7c533888494be4a9835d1ea1ab19 196 PANTHER PTHR21235 2 196 2.4E-77 T 23-04-2016 BUMPUSDA_RS00515 17df7c533888494be4a9835d1ea1ab19 196 Gene3D G3DSA:3.40.50.880 1 196 2.1E-64 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like BUMPUSDA_RS00515 17df7c533888494be4a9835d1ea1ab19 196 PANTHER PTHR21235:SF1 2 196 2.4E-77 T 23-04-2016 BUMPUSDA_RS02430 0d7979d2c4e863ea614e4a5d55bbf4ae 623 Pfam PF13624 SurA N-terminal domain 1 165 4.6E-27 T 23-04-2016 BUMPUSDA_RS02430 0d7979d2c4e863ea614e4a5d55bbf4ae 623 Pfam PF13145 PPIC-type PPIASE domain 249 368 1.7E-11 T 23-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 BUMPUSDA_RS02430 0d7979d2c4e863ea614e4a5d55bbf4ae 623 SUPERFAMILY SSF54534 225 356 2.88E-17 T 23-04-2016 BUMPUSDA_RS02430 0d7979d2c4e863ea614e4a5d55bbf4ae 623 PANTHER PTHR10657 1 175 3.8E-80 T 23-04-2016 BUMPUSDA_RS02430 0d7979d2c4e863ea614e4a5d55bbf4ae 623 PANTHER PTHR10657 203 518 3.8E-80 T 23-04-2016 BUMPUSDA_RS02430 0d7979d2c4e863ea614e4a5d55bbf4ae 623 PANTHER PTHR10657:SF13 1 175 3.8E-80 T 23-04-2016 BUMPUSDA_RS02430 0d7979d2c4e863ea614e4a5d55bbf4ae 623 PANTHER PTHR10657:SF13 203 518 3.8E-80 T 23-04-2016 BUMPUSDA_RS02430 0d7979d2c4e863ea614e4a5d55bbf4ae 623 Gene3D G3DSA:3.10.50.40 260 380 2.1E-18 T 23-04-2016 BUMPUSDA_RS02430 0d7979d2c4e863ea614e4a5d55bbf4ae 623 SUPERFAMILY SSF109998 40 169 9.81E-20 T 23-04-2016 IPR027304 Trigger factor/SurA domain BUMPUSDA_RS02430 0d7979d2c4e863ea614e4a5d55bbf4ae 623 SUPERFAMILY SSF109998 203 245 9.81E-20 T 23-04-2016 IPR027304 Trigger factor/SurA domain BUMPUSDA_RS02205 d6d378ec10653cae6a6440329fb08e38 606 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 154 1.0E-27 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 BUMPUSDA_RS02205 d6d378ec10653cae6a6440329fb08e38 606 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 599 4.6E-274 T 23-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 BUMPUSDA_RS02205 d6d378ec10653cae6a6440329fb08e38 606 SUPERFAMILY SSF52540 2 207 6.23E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02205 d6d378ec10653cae6a6440329fb08e38 606 Gene3D G3DSA:3.30.70.240 399 478 1.8E-25 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain BUMPUSDA_RS02205 d6d378ec10653cae6a6440329fb08e38 606 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site BUMPUSDA_RS02205 d6d378ec10653cae6a6440329fb08e38 606 Gene3D G3DSA:3.30.70.870 304 398 2.6E-33 T 23-04-2016 BUMPUSDA_RS02205 d6d378ec10653cae6a6440329fb08e38 606 SUPERFAMILY SSF50447 152 299 1.6E-29 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain BUMPUSDA_RS02205 d6d378ec10653cae6a6440329fb08e38 606 Gene3D G3DSA:2.40.30.10 206 303 3.7E-25 T 23-04-2016 BUMPUSDA_RS02205 d6d378ec10653cae6a6440329fb08e38 606 PANTHER PTHR23115 4 593 9.9E-275 T 23-04-2016 BUMPUSDA_RS02205 d6d378ec10653cae6a6440329fb08e38 606 SUPERFAMILY SSF54980 398 512 1.06E-21 T 23-04-2016 IPR009022 Elongation factor G, III-V domain BUMPUSDA_RS02205 d6d378ec10653cae6a6440329fb08e38 606 Gene3D G3DSA:2.40.50.250 483 577 2.9E-38 T 23-04-2016 BUMPUSDA_RS02205 d6d378ec10653cae6a6440329fb08e38 606 Gene3D G3DSA:3.40.50.300 2 205 1.3E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02205 d6d378ec10653cae6a6440329fb08e38 606 SUPERFAMILY SSF54980 302 387 1.51E-13 T 23-04-2016 IPR009022 Elongation factor G, III-V domain BUMPUSDA_RS02205 d6d378ec10653cae6a6440329fb08e38 606 Pfam PF03144 Elongation factor Tu domain 2 219 289 7.0E-10 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 BUMPUSDA_RS02205 d6d378ec10653cae6a6440329fb08e38 606 PANTHER PTHR23115:SF14 4 593 9.9E-275 T 23-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 BUMPUSDA_RS02205 d6d378ec10653cae6a6440329fb08e38 606 Pfam PF00679 Elongation factor G C-terminus 397 478 8.4E-19 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain BUMPUSDA_RS02205 d6d378ec10653cae6a6440329fb08e38 606 Pfam PF00009 Elongation factor Tu GTP binding domain 3 195 8.8E-58 T 23-04-2016 BUMPUSDA_RS02205 d6d378ec10653cae6a6440329fb08e38 606 PRINTS PR00315 GTP-binding elongation factor signature 87 98 1.0E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BUMPUSDA_RS02205 d6d378ec10653cae6a6440329fb08e38 606 PRINTS PR00315 GTP-binding elongation factor signature 123 132 1.0E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BUMPUSDA_RS02205 d6d378ec10653cae6a6440329fb08e38 606 PRINTS PR00315 GTP-binding elongation factor signature 51 59 1.0E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BUMPUSDA_RS02205 d6d378ec10653cae6a6440329fb08e38 606 PRINTS PR00315 GTP-binding elongation factor signature 7 20 1.0E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BUMPUSDA_RS02205 d6d378ec10653cae6a6440329fb08e38 606 PRINTS PR00315 GTP-binding elongation factor signature 71 81 1.0E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BUMPUSDA_RS01715 5696ad103896e96f312d06afc0209f5c 133 Pfam PF00460 Flagella basal body rod protein 15 39 2.0E-8 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BUMPUSDA_RS01715 5696ad103896e96f312d06afc0209f5c 133 PIRSF PIRSF002889 1 133 1.5E-33 T 23-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 BUMPUSDA_RS01715 5696ad103896e96f312d06afc0209f5c 133 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 23-04-2016 IPR019776 Flagellar basal body rod protein, conserved site BUMPUSDA_RS01715 5696ad103896e96f312d06afc0209f5c 133 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 132 1.1E-37 T 23-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 BUMPUSDA_RS01715 5696ad103896e96f312d06afc0209f5c 133 PANTHER PTHR30435:SF12 3 133 6.2E-27 T 23-04-2016 BUMPUSDA_RS01715 5696ad103896e96f312d06afc0209f5c 133 PANTHER PTHR30435 3 133 6.2E-27 T 23-04-2016 BUMPUSDA_RS02180 222394dfbd3186e63533bf37ad8cc7e8 602 SUPERFAMILY SSF52343 447 602 5.24E-47 T 23-04-2016 BUMPUSDA_RS02180 222394dfbd3186e63533bf37ad8cc7e8 602 PANTHER PTHR19384:SF76 64 602 4.1E-186 T 23-04-2016 BUMPUSDA_RS02180 222394dfbd3186e63533bf37ad8cc7e8 602 PRINTS PR00369 Flavodoxin signature 145 155 1.1E-11 T 23-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BUMPUSDA_RS02180 222394dfbd3186e63533bf37ad8cc7e8 602 PRINTS PR00369 Flavodoxin signature 169 188 1.1E-11 T 23-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BUMPUSDA_RS02180 222394dfbd3186e63533bf37ad8cc7e8 602 PRINTS PR00369 Flavodoxin signature 65 78 1.1E-11 T 23-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BUMPUSDA_RS02180 222394dfbd3186e63533bf37ad8cc7e8 602 PRINTS PR00369 Flavodoxin signature 113 124 1.1E-11 T 23-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BUMPUSDA_RS02180 222394dfbd3186e63533bf37ad8cc7e8 602 Gene3D G3DSA:2.40.30.10 232 282 6.2E-35 T 23-04-2016 BUMPUSDA_RS02180 222394dfbd3186e63533bf37ad8cc7e8 602 Gene3D G3DSA:2.40.30.10 387 457 6.2E-35 T 23-04-2016 BUMPUSDA_RS02180 222394dfbd3186e63533bf37ad8cc7e8 602 PIRSF PIRSF000207 1 602 3.3E-234 T 23-04-2016 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 BUMPUSDA_RS02180 222394dfbd3186e63533bf37ad8cc7e8 602 SUPERFAMILY SSF52218 64 210 1.54E-39 T 23-04-2016 IPR029039 Flavoprotein-like domain BUMPUSDA_RS02180 222394dfbd3186e63533bf37ad8cc7e8 602 PANTHER PTHR19384 64 602 4.1E-186 T 23-04-2016 BUMPUSDA_RS02180 222394dfbd3186e63533bf37ad8cc7e8 602 SUPERFAMILY SSF63380 230 449 3.03E-60 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 BUMPUSDA_RS02180 222394dfbd3186e63533bf37ad8cc7e8 602 Gene3D G3DSA:3.40.50.80 458 601 1.4E-53 T 23-04-2016 BUMPUSDA_RS02180 222394dfbd3186e63533bf37ad8cc7e8 602 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 528 544 2.4E-25 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BUMPUSDA_RS02180 222394dfbd3186e63533bf37ad8cc7e8 602 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 422 431 2.4E-25 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BUMPUSDA_RS02180 222394dfbd3186e63533bf37ad8cc7e8 602 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 484 493 2.4E-25 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BUMPUSDA_RS02180 222394dfbd3186e63533bf37ad8cc7e8 602 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 272 282 2.4E-25 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BUMPUSDA_RS02180 222394dfbd3186e63533bf37ad8cc7e8 602 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 551 559 2.4E-25 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BUMPUSDA_RS02180 222394dfbd3186e63533bf37ad8cc7e8 602 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 389 396 2.4E-25 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BUMPUSDA_RS02180 222394dfbd3186e63533bf37ad8cc7e8 602 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 459 478 2.4E-25 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BUMPUSDA_RS02180 222394dfbd3186e63533bf37ad8cc7e8 602 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 497 508 2.4E-25 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BUMPUSDA_RS02180 222394dfbd3186e63533bf37ad8cc7e8 602 Pfam PF00258 Flavodoxin 66 188 1.4E-24 T 23-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 BUMPUSDA_RS02180 222394dfbd3186e63533bf37ad8cc7e8 602 Pfam PF00667 FAD binding domain 235 427 7.8E-28 T 23-04-2016 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 BUMPUSDA_RS02180 222394dfbd3186e63533bf37ad8cc7e8 602 Gene3D G3DSA:1.20.990.10 283 386 1.8E-27 T 23-04-2016 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 GO:0016491|GO:0055114 BUMPUSDA_RS02180 222394dfbd3186e63533bf37ad8cc7e8 602 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 2 602 47.946 T 23-04-2016 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 BUMPUSDA_RS02180 222394dfbd3186e63533bf37ad8cc7e8 602 Pfam PF00175 Oxidoreductase NAD-binding domain 460 567 1.5E-18 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BUMPUSDA_RS02180 222394dfbd3186e63533bf37ad8cc7e8 602 Gene3D G3DSA:3.40.50.360 61 209 1.7E-40 T 23-04-2016 IPR029039 Flavoprotein-like domain BUMPUSDA_RS02180 222394dfbd3186e63533bf37ad8cc7e8 602 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 10 602 1.4E-276 T 23-04-2016 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 BUMPUSDA_RS01485 e5a232135d90d6cd30e14e3f6df06ad1 810 Pfam PF00270 DEAD/DEAH box helicase 265 425 9.6E-20 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BUMPUSDA_RS01485 e5a232135d90d6cd30e14e3f6df06ad1 810 SUPERFAMILY SSF143517 659 808 7.32E-37 T 23-04-2016 BUMPUSDA_RS01485 e5a232135d90d6cd30e14e3f6df06ad1 810 PANTHER PTHR14025 46 807 0.0 T 23-04-2016 BUMPUSDA_RS01485 e5a232135d90d6cd30e14e3f6df06ad1 810 SUPERFAMILY SSF52540 19 115 4.76E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01485 e5a232135d90d6cd30e14e3f6df06ad1 810 Pfam PF03461 TRCF domain 669 761 9.3E-25 T 23-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 BUMPUSDA_RS01485 e5a232135d90d6cd30e14e3f6df06ad1 810 Pfam PF00271 Helicase conserved C-terminal domain 466 569 1.5E-17 T 23-04-2016 IPR001650 Helicase, C-terminal BUMPUSDA_RS01485 e5a232135d90d6cd30e14e3f6df06ad1 810 Pfam PF02559 CarD-like/TRCF domain 143 235 1.9E-20 T 23-04-2016 IPR003711 CarD-like/TRCF domain BUMPUSDA_RS01485 e5a232135d90d6cd30e14e3f6df06ad1 810 SUPERFAMILY SSF141259 134 208 5.49E-17 T 23-04-2016 IPR003711 CarD-like/TRCF domain BUMPUSDA_RS01485 e5a232135d90d6cd30e14e3f6df06ad1 810 SMART SM00982 668 768 1.5E-33 T 23-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 BUMPUSDA_RS01485 e5a232135d90d6cd30e14e3f6df06ad1 810 Gene3D G3DSA:3.40.50.300 461 616 5.1E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01485 e5a232135d90d6cd30e14e3f6df06ad1 810 SMART SM00487 260 452 3.0E-29 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain BUMPUSDA_RS01485 e5a232135d90d6cd30e14e3f6df06ad1 810 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 28 741 5.3E-272 T 23-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 BUMPUSDA_RS01485 e5a232135d90d6cd30e14e3f6df06ad1 810 SUPERFAMILY SSF52540 200 443 5.4E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01485 e5a232135d90d6cd30e14e3f6df06ad1 810 SMART SM01058 139 236 3.5E-31 T 23-04-2016 IPR003711 CarD-like/TRCF domain BUMPUSDA_RS01485 e5a232135d90d6cd30e14e3f6df06ad1 810 SMART SM00490 486 570 2.0E-17 T 23-04-2016 IPR001650 Helicase, C-terminal BUMPUSDA_RS01485 e5a232135d90d6cd30e14e3f6df06ad1 810 PANTHER PTHR14025:SF21 46 807 0.0 T 23-04-2016 BUMPUSDA_RS01485 e5a232135d90d6cd30e14e3f6df06ad1 810 Gene3D G3DSA:3.40.50.300 248 446 4.0E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01485 e5a232135d90d6cd30e14e3f6df06ad1 810 SUPERFAMILY SSF52540 442 650 5.88E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01875 384ab00ac8c11fe908369c16c58dbebf 309 Gene3D G3DSA:3.40.50.1370 8 146 4.0E-49 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BUMPUSDA_RS01875 384ab00ac8c11fe908369c16c58dbebf 309 PANTHER PTHR11405:SF16 2 308 6.4E-132 T 23-04-2016 BUMPUSDA_RS01875 384ab00ac8c11fe908369c16c58dbebf 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 1.7E-24 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BUMPUSDA_RS01875 384ab00ac8c11fe908369c16c58dbebf 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 1.7E-24 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BUMPUSDA_RS01875 384ab00ac8c11fe908369c16c58dbebf 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 1.7E-24 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BUMPUSDA_RS01875 384ab00ac8c11fe908369c16c58dbebf 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 1.7E-24 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BUMPUSDA_RS01875 384ab00ac8c11fe908369c16c58dbebf 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BUMPUSDA_RS01875 384ab00ac8c11fe908369c16c58dbebf 309 SUPERFAMILY SSF53671 4 305 6.15E-95 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BUMPUSDA_RS01875 384ab00ac8c11fe908369c16c58dbebf 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 2.8E-26 T 23-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 BUMPUSDA_RS01875 384ab00ac8c11fe908369c16c58dbebf 309 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 1.4E-112 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 BUMPUSDA_RS01875 384ab00ac8c11fe908369c16c58dbebf 309 PANTHER PTHR11405 2 308 6.4E-132 T 23-04-2016 BUMPUSDA_RS01875 384ab00ac8c11fe908369c16c58dbebf 309 Gene3D G3DSA:3.40.50.1370 147 292 2.5E-50 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BUMPUSDA_RS01875 384ab00ac8c11fe908369c16c58dbebf 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 6.4E-35 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 BUMPUSDA_RS01875 384ab00ac8c11fe908369c16c58dbebf 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 6.4E-35 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 BUMPUSDA_RS01875 384ab00ac8c11fe908369c16c58dbebf 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 6.4E-35 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 BUMPUSDA_RS01875 384ab00ac8c11fe908369c16c58dbebf 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 6.4E-35 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 BUMPUSDA_RS01875 384ab00ac8c11fe908369c16c58dbebf 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 6.4E-35 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 BUMPUSDA_RS01875 384ab00ac8c11fe908369c16c58dbebf 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 6.4E-35 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 BUMPUSDA_RS01875 384ab00ac8c11fe908369c16c58dbebf 309 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 36.465 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 BUMPUSDA_RS01875 384ab00ac8c11fe908369c16c58dbebf 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 5.1E-43 T 23-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 BUMPUSDA_RS02025 a1bc4a8ff514e70fd9decc79a70ff140 98 Gene3D G3DSA:1.10.10.60 27 98 3.6E-25 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 BUMPUSDA_RS02025 a1bc4a8ff514e70fd9decc79a70ff140 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 3.5E-13 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BUMPUSDA_RS02025 a1bc4a8ff514e70fd9decc79a70ff140 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 3.5E-13 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BUMPUSDA_RS02025 a1bc4a8ff514e70fd9decc79a70ff140 98 PIRSF PIRSF002097 1 98 2.6E-39 T 23-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 BUMPUSDA_RS02025 a1bc4a8ff514e70fd9decc79a70ff140 98 SUPERFAMILY SSF46689 6 98 7.89E-22 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 BUMPUSDA_RS02025 a1bc4a8ff514e70fd9decc79a70ff140 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 2.8E-14 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BUMPUSDA_RS02025 a1bc4a8ff514e70fd9decc79a70ff140 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 30.457 T 23-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 BUMPUSDA_RS02025 a1bc4a8ff514e70fd9decc79a70ff140 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 1.1E-20 T 23-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 BUMPUSDA_RS02025 a1bc4a8ff514e70fd9decc79a70ff140 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 1.1E-20 T 23-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 BUMPUSDA_RS02025 a1bc4a8ff514e70fd9decc79a70ff140 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 1.1E-20 T 23-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 BUMPUSDA_RS02025 a1bc4a8ff514e70fd9decc79a70ff140 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 1.1E-20 T 23-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 BUMPUSDA_RS02025 a1bc4a8ff514e70fd9decc79a70ff140 98 PANTHER PTHR32071 25 98 1.0E-22 T 23-04-2016 BUMPUSDA_RS02240 c50fa30b4edb1d8f701af5e3901b3fe3 264 PANTHER PTHR11548 1 264 1.3E-155 T 23-04-2016 BUMPUSDA_RS02240 c50fa30b4edb1d8f701af5e3901b3fe3 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 3.8E-84 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 BUMPUSDA_RS02240 c50fa30b4edb1d8f701af5e3901b3fe3 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 6.7E-38 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 BUMPUSDA_RS02240 c50fa30b4edb1d8f701af5e3901b3fe3 264 Pfam PF00303 Thymidylate synthase 2 264 1.1E-114 T 23-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 BUMPUSDA_RS02240 c50fa30b4edb1d8f701af5e3901b3fe3 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 23-04-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 BUMPUSDA_RS02240 c50fa30b4edb1d8f701af5e3901b3fe3 264 Gene3D G3DSA:3.30.572.10 1 264 1.3E-121 T 23-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 BUMPUSDA_RS02240 c50fa30b4edb1d8f701af5e3901b3fe3 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 42.048 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 BUMPUSDA_RS02240 c50fa30b4edb1d8f701af5e3901b3fe3 264 SUPERFAMILY SSF55831 1 263 1.7E-116 T 23-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 BUMPUSDA_RS02240 c50fa30b4edb1d8f701af5e3901b3fe3 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 7.0E-45 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 BUMPUSDA_RS02240 c50fa30b4edb1d8f701af5e3901b3fe3 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 7.0E-45 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 BUMPUSDA_RS02240 c50fa30b4edb1d8f701af5e3901b3fe3 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 7.0E-45 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 BUMPUSDA_RS02240 c50fa30b4edb1d8f701af5e3901b3fe3 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 7.0E-45 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 BUMPUSDA_RS02240 c50fa30b4edb1d8f701af5e3901b3fe3 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 7.0E-45 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 BUMPUSDA_RS02705 010d597b8a1998c2cb2c725bc08db4c0 119 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 3 119 2.8E-40 T 23-04-2016 IPR017462 Sulphur relay, TusC/DsrF BUMPUSDA_RS02705 010d597b8a1998c2cb2c725bc08db4c0 119 PANTHER PTHR38780 1 119 8.2E-37 T 23-04-2016 BUMPUSDA_RS02705 010d597b8a1998c2cb2c725bc08db4c0 119 Gene3D G3DSA:3.40.1260.10 1 119 6.2E-35 T 23-04-2016 IPR027396 DsrEFH-like BUMPUSDA_RS02705 010d597b8a1998c2cb2c725bc08db4c0 119 PANTHER PTHR38780:SF1 1 119 8.2E-37 T 23-04-2016 BUMPUSDA_RS02705 010d597b8a1998c2cb2c725bc08db4c0 119 Pfam PF02635 DsrE/DsrF-like family 3 119 2.6E-16 T 23-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein BUMPUSDA_RS02705 010d597b8a1998c2cb2c725bc08db4c0 119 SUPERFAMILY SSF75169 1 119 6.39E-28 T 23-04-2016 IPR027396 DsrEFH-like BUMPUSDA_RS02115 5e0f0054049dc913bc664267cb62e927 431 Pfam PF00113 Enolase, C-terminal TIM barrel domain 145 421 7.8E-128 T 23-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 BUMPUSDA_RS02115 5e0f0054049dc913bc664267cb62e927 431 PIRSF PIRSF001400 1 429 3.4E-187 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 BUMPUSDA_RS02115 5e0f0054049dc913bc664267cb62e927 431 Gene3D G3DSA:3.30.390.10 3 126 1.9E-51 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BUMPUSDA_RS02115 5e0f0054049dc913bc664267cb62e927 431 SUPERFAMILY SSF51604 144 422 4.9E-121 T 23-04-2016 IPR029065 Enolase C-terminal domain-like BUMPUSDA_RS02115 5e0f0054049dc913bc664267cb62e927 431 SMART SM01193 4 134 3.1E-84 T 23-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 BUMPUSDA_RS02115 5e0f0054049dc913bc664267cb62e927 431 Gene3D G3DSA:3.20.20.120 128 423 7.6E-125 T 23-04-2016 IPR029065 Enolase C-terminal domain-like BUMPUSDA_RS02115 5e0f0054049dc913bc664267cb62e927 431 PRINTS PR00148 Enolase signature 165 178 9.4E-43 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 BUMPUSDA_RS02115 5e0f0054049dc913bc664267cb62e927 431 PRINTS PR00148 Enolase signature 340 354 9.4E-43 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 BUMPUSDA_RS02115 5e0f0054049dc913bc664267cb62e927 431 PRINTS PR00148 Enolase signature 107 123 9.4E-43 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 BUMPUSDA_RS02115 5e0f0054049dc913bc664267cb62e927 431 PRINTS PR00148 Enolase signature 317 328 9.4E-43 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 BUMPUSDA_RS02115 5e0f0054049dc913bc664267cb62e927 431 PRINTS PR00148 Enolase signature 37 51 9.4E-43 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 BUMPUSDA_RS02115 5e0f0054049dc913bc664267cb62e927 431 PRINTS PR00148 Enolase signature 369 386 9.4E-43 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 BUMPUSDA_RS02115 5e0f0054049dc913bc664267cb62e927 431 SUPERFAMILY SSF54826 3 137 1.68E-53 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BUMPUSDA_RS02115 5e0f0054049dc913bc664267cb62e927 431 SMART SM01192 143 426 8.9E-196 T 23-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 BUMPUSDA_RS02115 5e0f0054049dc913bc664267cb62e927 431 ProSitePatterns PS00164 Enolase signature. 340 353 - T 23-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 BUMPUSDA_RS02115 5e0f0054049dc913bc664267cb62e927 431 Hamap MF_00318 Enolase [eno]. 2 417 42.443 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 BUMPUSDA_RS02115 5e0f0054049dc913bc664267cb62e927 431 Pfam PF03952 Enolase, N-terminal domain 4 134 1.0E-55 T 23-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 BUMPUSDA_RS02115 5e0f0054049dc913bc664267cb62e927 431 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 421 3.6E-198 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 BUMPUSDA_RS02115 5e0f0054049dc913bc664267cb62e927 431 PANTHER PTHR11902 1 420 3.1E-241 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 BUMPUSDA_RS01860 3fd44e4d6a45520ae08940bfbe111e2e 956 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 887 942 5.4E-11 T 23-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 BUMPUSDA_RS01860 3fd44e4d6a45520ae08940bfbe111e2e 956 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 950 14.967 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 BUMPUSDA_RS01860 3fd44e4d6a45520ae08940bfbe111e2e 956 Gene3D G3DSA:3.90.740.10 193 360 5.2E-37 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS01860 3fd44e4d6a45520ae08940bfbe111e2e 956 Pfam PF08264 Anticodon-binding domain of tRNA 675 820 1.3E-33 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS01860 3fd44e4d6a45520ae08940bfbe111e2e 956 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 41 52 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS01860 3fd44e4d6a45520ae08940bfbe111e2e 956 PANTHER PTHR11946:SF5 881 944 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 BUMPUSDA_RS01860 3fd44e4d6a45520ae08940bfbe111e2e 956 PANTHER PTHR11946:SF5 334 571 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 BUMPUSDA_RS01860 3fd44e4d6a45520ae08940bfbe111e2e 956 PANTHER PTHR11946:SF5 1 315 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 BUMPUSDA_RS01860 3fd44e4d6a45520ae08940bfbe111e2e 956 PANTHER PTHR11946:SF5 609 861 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 BUMPUSDA_RS01860 3fd44e4d6a45520ae08940bfbe111e2e 956 SUPERFAMILY SSF46589 886 947 3.09E-11 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 BUMPUSDA_RS01860 3fd44e4d6a45520ae08940bfbe111e2e 956 Gene3D G3DSA:3.40.50.620 365 572 2.7E-132 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BUMPUSDA_RS01860 3fd44e4d6a45520ae08940bfbe111e2e 956 Gene3D G3DSA:3.40.50.620 4 192 2.7E-132 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BUMPUSDA_RS01860 3fd44e4d6a45520ae08940bfbe111e2e 956 Gene3D G3DSA:3.40.50.620 610 631 2.7E-132 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BUMPUSDA_RS01860 3fd44e4d6a45520ae08940bfbe111e2e 956 SUPERFAMILY SSF52374 610 642 2.15E-131 T 23-04-2016 BUMPUSDA_RS01860 3fd44e4d6a45520ae08940bfbe111e2e 956 SUPERFAMILY SSF52374 365 572 2.15E-131 T 23-04-2016 BUMPUSDA_RS01860 3fd44e4d6a45520ae08940bfbe111e2e 956 SUPERFAMILY SSF52374 1 191 2.15E-131 T 23-04-2016 BUMPUSDA_RS01860 3fd44e4d6a45520ae08940bfbe111e2e 956 PRINTS PR00986 Valyl-tRNA synthetase signature 501 519 1.1E-29 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 BUMPUSDA_RS01860 3fd44e4d6a45520ae08940bfbe111e2e 956 PRINTS PR00986 Valyl-tRNA synthetase signature 34 45 1.1E-29 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 BUMPUSDA_RS01860 3fd44e4d6a45520ae08940bfbe111e2e 956 PRINTS PR00986 Valyl-tRNA synthetase signature 470 491 1.1E-29 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 BUMPUSDA_RS01860 3fd44e4d6a45520ae08940bfbe111e2e 956 PRINTS PR00986 Valyl-tRNA synthetase signature 370 383 1.1E-29 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 BUMPUSDA_RS01860 3fd44e4d6a45520ae08940bfbe111e2e 956 PRINTS PR00986 Valyl-tRNA synthetase signature 237 254 1.1E-29 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 BUMPUSDA_RS01860 3fd44e4d6a45520ae08940bfbe111e2e 956 SUPERFAMILY SSF50677 191 363 4.84E-47 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS01860 3fd44e4d6a45520ae08940bfbe111e2e 956 SUPERFAMILY SSF47323 643 900 1.83E-53 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS01860 3fd44e4d6a45520ae08940bfbe111e2e 956 PANTHER PTHR11946 881 944 0.0 T 23-04-2016 BUMPUSDA_RS01860 3fd44e4d6a45520ae08940bfbe111e2e 956 PANTHER PTHR11946 334 571 0.0 T 23-04-2016 BUMPUSDA_RS01860 3fd44e4d6a45520ae08940bfbe111e2e 956 PANTHER PTHR11946 1 315 0.0 T 23-04-2016 BUMPUSDA_RS01860 3fd44e4d6a45520ae08940bfbe111e2e 956 PANTHER PTHR11946 609 861 0.0 T 23-04-2016 BUMPUSDA_RS01860 3fd44e4d6a45520ae08940bfbe111e2e 956 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 932 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 BUMPUSDA_RS01860 3fd44e4d6a45520ae08940bfbe111e2e 956 Gene3D G3DSA:1.10.730.10 632 817 2.0E-50 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS01860 3fd44e4d6a45520ae08940bfbe111e2e 956 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 632 3.0E-192 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS02675 6c34e92bcfe1fb2a97e030916f2e8bf2 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 8.6E-47 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02675 6c34e92bcfe1fb2a97e030916f2e8bf2 103 PANTHER PTHR11700 1 102 1.4E-53 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02675 6c34e92bcfe1fb2a97e030916f2e8bf2 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.0E-18 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02675 6c34e92bcfe1fb2a97e030916f2e8bf2 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.0E-18 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02675 6c34e92bcfe1fb2a97e030916f2e8bf2 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.0E-18 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02675 6c34e92bcfe1fb2a97e030916f2e8bf2 103 Gene3D G3DSA:3.30.70.600 3 102 8.1E-44 T 23-04-2016 IPR027486 Ribosomal protein S10 domain BUMPUSDA_RS02675 6c34e92bcfe1fb2a97e030916f2e8bf2 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.551 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02675 6c34e92bcfe1fb2a97e030916f2e8bf2 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 23-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02675 6c34e92bcfe1fb2a97e030916f2e8bf2 103 SMART SM01403 7 101 4.6E-56 T 23-04-2016 IPR027486 Ribosomal protein S10 domain BUMPUSDA_RS02675 6c34e92bcfe1fb2a97e030916f2e8bf2 103 SUPERFAMILY SSF54999 5 101 7.85E-37 T 23-04-2016 IPR027486 Ribosomal protein S10 domain BUMPUSDA_RS02675 6c34e92bcfe1fb2a97e030916f2e8bf2 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 1.3E-35 T 23-04-2016 IPR027486 Ribosomal protein S10 domain BUMPUSDA_RS01090 e8166e30cbd241d1c2b0854bebfb3cda 354 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 6 351 32.508 T 23-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 BUMPUSDA_RS01090 e8166e30cbd241d1c2b0854bebfb3cda 354 Gene3D G3DSA:3.40.50.2000 185 352 2.3E-22 T 23-04-2016 BUMPUSDA_RS01090 e8166e30cbd241d1c2b0854bebfb3cda 354 PANTHER PTHR21015 5 354 1.5E-109 T 23-04-2016 BUMPUSDA_RS01090 e8166e30cbd241d1c2b0854bebfb3cda 354 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 4 347 8.7E-115 T 23-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 BUMPUSDA_RS01090 e8166e30cbd241d1c2b0854bebfb3cda 354 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 183 330 1.8E-36 T 23-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 BUMPUSDA_RS01090 e8166e30cbd241d1c2b0854bebfb3cda 354 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 6 141 4.6E-43 T 23-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 BUMPUSDA_RS01090 e8166e30cbd241d1c2b0854bebfb3cda 354 PANTHER PTHR21015:SF22 5 354 1.5E-109 T 23-04-2016 BUMPUSDA_RS01090 e8166e30cbd241d1c2b0854bebfb3cda 354 Gene3D G3DSA:3.40.50.2000 3 184 4.1E-66 T 23-04-2016 BUMPUSDA_RS01090 e8166e30cbd241d1c2b0854bebfb3cda 354 SUPERFAMILY SSF53756 4 352 2.3E-118 T 23-04-2016 BUMPUSDA_RS01800 11fbf2d7fc08cd070edddc715d2aedd3 329 Gene3D G3DSA:1.20.272.10 209 324 1.9E-30 T 23-04-2016 BUMPUSDA_RS01800 11fbf2d7fc08cd070edddc715d2aedd3 329 PANTHER PTHR11669 12 329 6.7E-57 T 23-04-2016 BUMPUSDA_RS01800 11fbf2d7fc08cd070edddc715d2aedd3 329 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 208 320 3.6E-30 T 23-04-2016 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BUMPUSDA_RS01800 11fbf2d7fc08cd070edddc715d2aedd3 329 PANTHER PTHR11669:SF8 12 329 6.7E-57 T 23-04-2016 BUMPUSDA_RS01800 11fbf2d7fc08cd070edddc715d2aedd3 329 Pfam PF13177 DNA polymerase III, delta subunit 10 163 1.2E-33 T 23-04-2016 BUMPUSDA_RS01800 11fbf2d7fc08cd070edddc715d2aedd3 329 SUPERFAMILY SSF48019 208 325 2.89E-34 T 23-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 BUMPUSDA_RS01800 11fbf2d7fc08cd070edddc715d2aedd3 329 SUPERFAMILY SSF52540 4 204 3.99E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01800 11fbf2d7fc08cd070edddc715d2aedd3 329 Gene3D G3DSA:3.40.50.300 12 163 1.8E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02895 a46ac954abf76e820d9d1f37706b4fc2 406 SMART SM00244 82 242 5.4E-34 T 23-04-2016 IPR001107 Band 7 domain BUMPUSDA_RS02895 a46ac954abf76e820d9d1f37706b4fc2 406 SUPERFAMILY SSF117892 115 248 2.09E-19 T 23-04-2016 IPR001107 Band 7 domain BUMPUSDA_RS02895 a46ac954abf76e820d9d1f37706b4fc2 406 PANTHER PTHR10264:SF51 4 377 2.7E-144 T 23-04-2016 IPR010201 HflK GO:0016021 BUMPUSDA_RS02895 a46ac954abf76e820d9d1f37706b4fc2 406 PANTHER PTHR10264 4 377 2.7E-144 T 23-04-2016 IPR001972 Stomatin family GO:0016020 BUMPUSDA_RS02895 a46ac954abf76e820d9d1f37706b4fc2 406 Pfam PF01145 SPFH domain / Band 7 family 86 257 7.2E-28 T 23-04-2016 IPR001107 Band 7 domain BUMPUSDA_RS02895 a46ac954abf76e820d9d1f37706b4fc2 406 TIGRFAM TIGR01933 hflK: HflK protein 84 340 1.8E-116 T 23-04-2016 IPR010201 HflK GO:0016021 BUMPUSDA_RS00985 3d571caf09733895f0dd922e28e7505f 177 SUPERFAMILY SSF53271 2 176 6.03E-51 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like BUMPUSDA_RS00985 3d571caf09733895f0dd922e28e7505f 177 PANTHER PTHR22573 1 171 6.9E-70 T 23-04-2016 BUMPUSDA_RS00985 3d571caf09733895f0dd922e28e7505f 177 PANTHER PTHR22573:SF56 1 171 6.9E-70 T 23-04-2016 BUMPUSDA_RS00985 3d571caf09733895f0dd922e28e7505f 177 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 173 1.1E-67 T 23-04-2016 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620|UniPathway: UPA00591 BUMPUSDA_RS00985 3d571caf09733895f0dd922e28e7505f 177 Pfam PF00156 Phosphoribosyl transferase domain 17 160 1.0E-19 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 BUMPUSDA_RS00985 3d571caf09733895f0dd922e28e7505f 177 Gene3D G3DSA:3.40.50.2020 2 173 2.0E-72 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like BUMPUSDA_RS00580 01bd9db48f576b08959e5673c05ed28f 332 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 1 329 5.3E-123 T 23-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 BUMPUSDA_RS00580 01bd9db48f576b08959e5673c05ed28f 332 Pfam PF03116 NQR2, RnfD, RnfE family 1 327 5.7E-86 T 23-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 BUMPUSDA_RS00580 01bd9db48f576b08959e5673c05ed28f 332 PANTHER PTHR30578:SF0 1 329 5.5E-103 T 23-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 BUMPUSDA_RS00580 01bd9db48f576b08959e5673c05ed28f 332 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 1 330 22.749 T 23-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 BUMPUSDA_RS00580 01bd9db48f576b08959e5673c05ed28f 332 PANTHER PTHR30578 1 329 5.5E-103 T 23-04-2016 BUMPUSDA_RS03025 3bd12e48c45a775859f954d28ed7e007 109 PANTHER PTHR38042 1 106 1.5E-16 T 23-04-2016 BUMPUSDA_RS03025 3bd12e48c45a775859f954d28ed7e007 109 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 106 3.0E-8 T 23-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 BUMPUSDA_RS03025 3bd12e48c45a775859f954d28ed7e007 109 SUPERFAMILY SSF69618 1 107 9.94E-18 T 23-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 BUMPUSDA_RS03025 3bd12e48c45a775859f954d28ed7e007 109 Gene3D G3DSA:3.40.50.10090 34 101 1.1E-6 T 23-04-2016 BUMPUSDA_RS03025 3bd12e48c45a775859f954d28ed7e007 109 PANTHER PTHR38042:SF1 1 106 1.5E-16 T 23-04-2016 BUMPUSDA_RS00195 a1004c2ab4dccbf2093f89c1b7736f9e 142 SUPERFAMILY SSF46906 68 141 3.53E-24 T 23-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS00195 a1004c2ab4dccbf2093f89c1b7736f9e 142 PANTHER PTHR11661 1 141 6.7E-60 T 23-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS00195 a1004c2ab4dccbf2093f89c1b7736f9e 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 7.0E-16 T 23-04-2016 BUMPUSDA_RS00195 a1004c2ab4dccbf2093f89c1b7736f9e 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 2.0E-65 T 23-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS00195 a1004c2ab4dccbf2093f89c1b7736f9e 142 SMART SM00649 9 141 1.4E-75 T 23-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS00195 a1004c2ab4dccbf2093f89c1b7736f9e 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.027 T 23-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS00195 a1004c2ab4dccbf2093f89c1b7736f9e 142 Gene3D G3DSA:3.30.1550.10 2 72 3.9E-36 T 23-04-2016 IPR020784 Ribosomal protein L11, N-terminal BUMPUSDA_RS00195 a1004c2ab4dccbf2093f89c1b7736f9e 142 Gene3D G3DSA:1.10.10.250 73 141 1.5E-26 T 23-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS00195 a1004c2ab4dccbf2093f89c1b7736f9e 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 6.5E-29 T 23-04-2016 IPR020784 Ribosomal protein L11, N-terminal BUMPUSDA_RS00195 a1004c2ab4dccbf2093f89c1b7736f9e 142 SUPERFAMILY SSF54747 3 73 2.09E-29 T 23-04-2016 IPR020784 Ribosomal protein L11, N-terminal BUMPUSDA_RS00195 a1004c2ab4dccbf2093f89c1b7736f9e 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 139 4.1E-21 T 23-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS00270 a427940b1c31260f71bb5463a4e3d5ad 148 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 13 30 3.6E-36 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BUMPUSDA_RS00270 a427940b1c31260f71bb5463a4e3d5ad 148 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 73 93 3.6E-36 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BUMPUSDA_RS00270 a427940b1c31260f71bb5463a4e3d5ad 148 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 123 141 3.6E-36 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BUMPUSDA_RS00270 a427940b1c31260f71bb5463a4e3d5ad 148 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 97 119 3.6E-36 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BUMPUSDA_RS00270 a427940b1c31260f71bb5463a4e3d5ad 148 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 9 140 1.2E-47 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BUMPUSDA_RS00270 a427940b1c31260f71bb5463a4e3d5ad 148 PANTHER PTHR36918:SF1 11 142 1.5E-50 T 23-04-2016 BUMPUSDA_RS00270 a427940b1c31260f71bb5463a4e3d5ad 148 SUPERFAMILY SSF54611 10 141 6.32E-47 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BUMPUSDA_RS00270 a427940b1c31260f71bb5463a4e3d5ad 148 Gene3D G3DSA:3.10.420.10 4 143 3.6E-47 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BUMPUSDA_RS00270 a427940b1c31260f71bb5463a4e3d5ad 148 Pfam PF02556 Preprotein translocase subunit SecB 8 141 3.0E-47 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BUMPUSDA_RS00270 a427940b1c31260f71bb5463a4e3d5ad 148 Hamap MF_00821 Protein-export protein SecB [secB]. 1 145 28.926 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 BUMPUSDA_RS00270 a427940b1c31260f71bb5463a4e3d5ad 148 PANTHER PTHR36918 11 142 1.5E-50 T 23-04-2016 BUMPUSDA_RS01525 0c03d1541f4a7e3ee55b66d6eb26af36 247 PANTHER PTHR13799 1 244 2.0E-59 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 BUMPUSDA_RS01525 0c03d1541f4a7e3ee55b66d6eb26af36 247 Gene3D G3DSA:3.40.1390.30 109 213 6.4E-23 T 23-04-2016 BUMPUSDA_RS01525 0c03d1541f4a7e3ee55b66d6eb26af36 247 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 2 244 3.9E-67 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 BUMPUSDA_RS01525 0c03d1541f4a7e3ee55b66d6eb26af36 247 Gene3D G3DSA:3.40.1390.30 6 108 1.6E-29 T 23-04-2016 BUMPUSDA_RS01525 0c03d1541f4a7e3ee55b66d6eb26af36 247 SUPERFAMILY SSF102705 1 246 2.22E-73 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 BUMPUSDA_RS01525 0c03d1541f4a7e3ee55b66d6eb26af36 247 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 8 234 4.4E-50 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 BUMPUSDA_RS01505 6737f814dac7a867fd376fc732a22110 338 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 150 2.0E-55 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 BUMPUSDA_RS01505 6737f814dac7a867fd376fc732a22110 338 PANTHER PTHR10836 1 334 9.7E-210 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 BUMPUSDA_RS01505 6737f814dac7a867fd376fc732a22110 338 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 1.3E-64 T 23-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 BUMPUSDA_RS01505 6737f814dac7a867fd376fc732a22110 338 SMART SM00846 3 150 1.9E-83 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 BUMPUSDA_RS01505 6737f814dac7a867fd376fc732a22110 338 SUPERFAMILY SSF51735 1 149 5.31E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain BUMPUSDA_RS01505 6737f814dac7a867fd376fc732a22110 338 SUPERFAMILY SSF55347 149 312 1.37E-73 T 23-04-2016 BUMPUSDA_RS01505 6737f814dac7a867fd376fc732a22110 338 PANTHER PTHR10836:SF41 1 334 9.7E-210 T 23-04-2016 BUMPUSDA_RS01505 6737f814dac7a867fd376fc732a22110 338 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 1.3E-125 T 23-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 BUMPUSDA_RS01505 6737f814dac7a867fd376fc732a22110 338 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 23-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 BUMPUSDA_RS01505 6737f814dac7a867fd376fc732a22110 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 1.6E-44 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 BUMPUSDA_RS01505 6737f814dac7a867fd376fc732a22110 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 1.6E-44 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 BUMPUSDA_RS01505 6737f814dac7a867fd376fc732a22110 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 1.6E-44 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 BUMPUSDA_RS01505 6737f814dac7a867fd376fc732a22110 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 1.6E-44 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 BUMPUSDA_RS01505 6737f814dac7a867fd376fc732a22110 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 1.6E-44 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 BUMPUSDA_RS01505 6737f814dac7a867fd376fc732a22110 338 Gene3D G3DSA:3.30.360.10 159 314 8.5E-78 T 23-04-2016 BUMPUSDA_RS01505 6737f814dac7a867fd376fc732a22110 338 Gene3D G3DSA:3.40.50.720 1 158 6.0E-70 T 23-04-2016 IPR016040 NAD(P)-binding domain BUMPUSDA_RS01505 6737f814dac7a867fd376fc732a22110 338 PIRSF PIRSF000149 1 333 2.1E-122 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 BUMPUSDA_RS00415 e5fdd5f2247695ce77ef93a05242acfd 244 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 219 231 - T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BUMPUSDA_RS00415 e5fdd5f2247695ce77ef93a05242acfd 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 42 51 1.4E-28 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BUMPUSDA_RS00415 e5fdd5f2247695ce77ef93a05242acfd 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 232 242 1.4E-28 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BUMPUSDA_RS00415 e5fdd5f2247695ce77ef93a05242acfd 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 142 154 1.4E-28 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BUMPUSDA_RS00415 e5fdd5f2247695ce77ef93a05242acfd 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 102 114 1.4E-28 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BUMPUSDA_RS00415 e5fdd5f2247695ce77ef93a05242acfd 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 114 128 1.4E-28 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BUMPUSDA_RS00415 e5fdd5f2247695ce77ef93a05242acfd 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 164 176 1.4E-28 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BUMPUSDA_RS00415 e5fdd5f2247695ce77ef93a05242acfd 244 PANTHER PTHR30587 31 244 7.2E-120 T 23-04-2016 BUMPUSDA_RS00415 e5fdd5f2247695ce77ef93a05242acfd 244 Pfam PF00813 FliP family 46 238 3.4E-77 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BUMPUSDA_RS00415 e5fdd5f2247695ce77ef93a05242acfd 244 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 171 186 - T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BUMPUSDA_RS00415 e5fdd5f2247695ce77ef93a05242acfd 244 PANTHER PTHR30587:SF0 31 244 7.2E-120 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BUMPUSDA_RS00415 e5fdd5f2247695ce77ef93a05242acfd 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 44 63 3.4E-68 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BUMPUSDA_RS00415 e5fdd5f2247695ce77ef93a05242acfd 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 63 83 3.4E-68 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BUMPUSDA_RS00415 e5fdd5f2247695ce77ef93a05242acfd 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 171 191 3.4E-68 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BUMPUSDA_RS00415 e5fdd5f2247695ce77ef93a05242acfd 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 83 102 3.4E-68 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BUMPUSDA_RS00415 e5fdd5f2247695ce77ef93a05242acfd 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 216 241 3.4E-68 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BUMPUSDA_RS00415 e5fdd5f2247695ce77ef93a05242acfd 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 192 213 3.4E-68 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BUMPUSDA_RS00415 e5fdd5f2247695ce77ef93a05242acfd 244 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 46 242 1.0E-90 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BUMPUSDA_RS00175 0541701f149e18bfb8deae48195c878d 1342 Gene3D G3DSA:3.90.1100.10 659 713 1.5E-144 T 23-04-2016 BUMPUSDA_RS00175 0541701f149e18bfb8deae48195c878d 1342 Gene3D G3DSA:3.90.1100.10 445 591 1.5E-144 T 23-04-2016 BUMPUSDA_RS00175 0541701f149e18bfb8deae48195c878d 1342 Gene3D G3DSA:3.90.1100.10 20 151 1.5E-144 T 23-04-2016 BUMPUSDA_RS00175 0541701f149e18bfb8deae48195c878d 1342 PANTHER PTHR20856:SF20 5 228 0.0 T 23-04-2016 BUMPUSDA_RS00175 0541701f149e18bfb8deae48195c878d 1342 PANTHER PTHR20856:SF20 1034 1128 0.0 T 23-04-2016 BUMPUSDA_RS00175 0541701f149e18bfb8deae48195c878d 1342 PANTHER PTHR20856:SF20 340 725 0.0 T 23-04-2016 BUMPUSDA_RS00175 0541701f149e18bfb8deae48195c878d 1342 PANTHER PTHR20856:SF20 1182 1342 0.0 T 23-04-2016 BUMPUSDA_RS00175 0541701f149e18bfb8deae48195c878d 1342 PANTHER PTHR20856:SF20 743 930 0.0 T 23-04-2016 BUMPUSDA_RS00175 0541701f149e18bfb8deae48195c878d 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 4.3E-29 T 23-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 BUMPUSDA_RS00175 0541701f149e18bfb8deae48195c878d 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1342 12.255 T 23-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BUMPUSDA_RS00175 0541701f149e18bfb8deae48195c878d 1342 PANTHER PTHR20856 5 228 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 BUMPUSDA_RS00175 0541701f149e18bfb8deae48195c878d 1342 PANTHER PTHR20856 1034 1128 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 BUMPUSDA_RS00175 0541701f149e18bfb8deae48195c878d 1342 PANTHER PTHR20856 340 725 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 BUMPUSDA_RS00175 0541701f149e18bfb8deae48195c878d 1342 PANTHER PTHR20856 1182 1342 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 BUMPUSDA_RS00175 0541701f149e18bfb8deae48195c878d 1342 PANTHER PTHR20856 743 930 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 BUMPUSDA_RS00175 0541701f149e18bfb8deae48195c878d 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 1.4E-51 T 23-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 BUMPUSDA_RS00175 0541701f149e18bfb8deae48195c878d 1342 Gene3D G3DSA:2.30.150.10 592 656 3.8E-28 T 23-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BUMPUSDA_RS00175 0541701f149e18bfb8deae48195c878d 1342 Gene3D G3DSA:2.40.50.100 715 792 8.0E-32 T 23-04-2016 BUMPUSDA_RS00175 0541701f149e18bfb8deae48195c878d 1342 Gene3D G3DSA:2.40.270.10 793 820 6.9E-88 T 23-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 BUMPUSDA_RS00175 0541701f149e18bfb8deae48195c878d 1342 Gene3D G3DSA:2.40.270.10 1060 1242 6.9E-88 T 23-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 BUMPUSDA_RS00175 0541701f149e18bfb8deae48195c878d 1342 Gene3D G3DSA:3.90.1110.10 153 230 9.1E-64 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 BUMPUSDA_RS00175 0541701f149e18bfb8deae48195c878d 1342 Gene3D G3DSA:3.90.1110.10 346 444 9.1E-64 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 BUMPUSDA_RS00175 0541701f149e18bfb8deae48195c878d 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 348 454 1.8E-15 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 BUMPUSDA_RS00175 0541701f149e18bfb8deae48195c878d 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 267 1.4E-8 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 BUMPUSDA_RS00175 0541701f149e18bfb8deae48195c878d 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1339 0.0 T 23-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BUMPUSDA_RS00175 0541701f149e18bfb8deae48195c878d 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 23-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 BUMPUSDA_RS00175 0541701f149e18bfb8deae48195c878d 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 8.2E-24 T 23-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BUMPUSDA_RS00175 0541701f149e18bfb8deae48195c878d 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1264 4.2E-161 T 23-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 BUMPUSDA_RS00175 0541701f149e18bfb8deae48195c878d 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1266 1340 2.7E-27 T 23-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 BUMPUSDA_RS00175 0541701f149e18bfb8deae48195c878d 1342 Gene3D G3DSA:2.40.50.150 1045 1059 4.3E-55 T 23-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 BUMPUSDA_RS00175 0541701f149e18bfb8deae48195c878d 1342 Gene3D G3DSA:2.40.50.150 828 937 4.3E-55 T 23-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 BUMPUSDA_RS00175 0541701f149e18bfb8deae48195c878d 1342 SUPERFAMILY SSF64484 343 939 0.0 T 23-04-2016 BUMPUSDA_RS00175 0541701f149e18bfb8deae48195c878d 1342 SUPERFAMILY SSF64484 11 226 0.0 T 23-04-2016 BUMPUSDA_RS00175 0541701f149e18bfb8deae48195c878d 1342 SUPERFAMILY SSF64484 1039 1341 0.0 T 23-04-2016 BUMPUSDA_RS00125 eaef6940e1c77d7fd33980503a8f7ec2 387 Gene3D G3DSA:3.40.50.300 182 386 5.5E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS00125 eaef6940e1c77d7fd33980503a8f7ec2 387 Gene3D G3DSA:1.20.120.140 80 168 1.3E-24 T 23-04-2016 BUMPUSDA_RS00125 eaef6940e1c77d7fd33980503a8f7ec2 387 Pfam PF02881 SRP54-type protein, helical bundle domain 103 167 1.2E-7 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 BUMPUSDA_RS00125 eaef6940e1c77d7fd33980503a8f7ec2 387 SMART SM00382 185 343 1.1E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain BUMPUSDA_RS00125 eaef6940e1c77d7fd33980503a8f7ec2 387 PANTHER PTHR11564 82 386 2.0E-119 T 23-04-2016 BUMPUSDA_RS00125 eaef6940e1c77d7fd33980503a8f7ec2 387 Pfam PF00448 SRP54-type protein, GTPase domain 187 386 9.2E-75 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 BUMPUSDA_RS00125 eaef6940e1c77d7fd33980503a8f7ec2 387 SUPERFAMILY SSF52540 181 386 4.11E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS00125 eaef6940e1c77d7fd33980503a8f7ec2 387 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 116 386 2.7E-103 T 23-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 BUMPUSDA_RS00125 eaef6940e1c77d7fd33980503a8f7ec2 387 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 360 373 - T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 BUMPUSDA_RS00125 eaef6940e1c77d7fd33980503a8f7ec2 387 SMART SM00963 92 172 8.1E-14 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 BUMPUSDA_RS00125 eaef6940e1c77d7fd33980503a8f7ec2 387 SUPERFAMILY SSF47364 87 165 1.31E-17 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 BUMPUSDA_RS00125 eaef6940e1c77d7fd33980503a8f7ec2 387 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 115 387 59.633 T 23-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 BUMPUSDA_RS00125 eaef6940e1c77d7fd33980503a8f7ec2 387 PANTHER PTHR11564:SF16 82 386 2.0E-119 T 23-04-2016 BUMPUSDA_RS00125 eaef6940e1c77d7fd33980503a8f7ec2 387 SMART SM00962 186 387 2.6E-111 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 BUMPUSDA_RS02860 3252b3ff22fb427b60955e2bfc324a5f 249 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 23-04-2016 IPR020583 Inositol monophosphatase, metal-binding site BUMPUSDA_RS02860 3252b3ff22fb427b60955e2bfc324a5f 249 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 1 247 2.2E-87 T 23-04-2016 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 BUMPUSDA_RS02860 3252b3ff22fb427b60955e2bfc324a5f 249 SUPERFAMILY SSF56655 1 246 1.7E-65 T 23-04-2016 BUMPUSDA_RS02860 3252b3ff22fb427b60955e2bfc324a5f 249 Gene3D G3DSA:3.30.540.10 2 147 9.0E-36 T 23-04-2016 BUMPUSDA_RS02860 3252b3ff22fb427b60955e2bfc324a5f 249 Pfam PF00459 Inositol monophosphatase family 6 229 2.5E-45 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 BUMPUSDA_RS02860 3252b3ff22fb427b60955e2bfc324a5f 249 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 205 219 - T 23-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 BUMPUSDA_RS02860 3252b3ff22fb427b60955e2bfc324a5f 249 Gene3D G3DSA:3.40.190.80 148 246 2.3E-34 T 23-04-2016 BUMPUSDA_RS02860 3252b3ff22fb427b60955e2bfc324a5f 249 PANTHER PTHR20854 1 244 1.7E-66 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 BUMPUSDA_RS02860 3252b3ff22fb427b60955e2bfc324a5f 249 PANTHER PTHR20854:SF5 1 244 1.7E-66 T 23-04-2016 BUMPUSDA_RS01310 e69ce4f950ff0d618c576f586558499e 308 ProSitePatterns PS00501 Signal peptidases I serine active site. 80 87 - T 23-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 BUMPUSDA_RS01310 e69ce4f950ff0d618c576f586558499e 308 Gene3D G3DSA:2.170.230.10 146 247 1.3E-16 T 23-04-2016 IPR019766 Peptidase S26A, all-beta subdomain BUMPUSDA_RS01310 e69ce4f950ff0d618c576f586558499e 308 ProSitePatterns PS00760 Signal peptidases I lysine active site. 137 149 - T 23-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 BUMPUSDA_RS01310 e69ce4f950ff0d618c576f586558499e 308 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 71 87 4.6E-26 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BUMPUSDA_RS01310 e69ce4f950ff0d618c576f586558499e 308 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 248 267 4.6E-26 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BUMPUSDA_RS01310 e69ce4f950ff0d618c576f586558499e 308 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 135 147 4.6E-26 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BUMPUSDA_RS01310 e69ce4f950ff0d618c576f586558499e 308 PANTHER PTHR12383:SF27 3 183 1.3E-89 T 23-04-2016 BUMPUSDA_RS01310 e69ce4f950ff0d618c576f586558499e 308 PANTHER PTHR12383:SF27 230 292 1.3E-89 T 23-04-2016 BUMPUSDA_RS01310 e69ce4f950ff0d618c576f586558499e 308 Pfam PF00717 Peptidase S24-like 77 155 8.9E-23 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B BUMPUSDA_RS01310 e69ce4f950ff0d618c576f586558499e 308 PANTHER PTHR12383 3 183 1.3E-89 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BUMPUSDA_RS01310 e69ce4f950ff0d618c576f586558499e 308 PANTHER PTHR12383 230 292 1.3E-89 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BUMPUSDA_RS01310 e69ce4f950ff0d618c576f586558499e 308 Gene3D G3DSA:2.10.109.10 67 145 1.3E-57 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain BUMPUSDA_RS01310 e69ce4f950ff0d618c576f586558499e 308 Gene3D G3DSA:2.10.109.10 248 294 1.3E-57 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain BUMPUSDA_RS01310 e69ce4f950ff0d618c576f586558499e 308 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 56 289 1.4E-46 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BUMPUSDA_RS01310 e69ce4f950ff0d618c576f586558499e 308 SUPERFAMILY SSF51306 69 307 1.05E-76 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C BUMPUSDA_RS01310 e69ce4f950ff0d618c576f586558499e 308 ProSitePatterns PS00761 Signal peptidases I signature 3. 253 266 - T 23-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 BUMPUSDA_RS01310 e69ce4f950ff0d618c576f586558499e 308 Pfam PF10502 Signal peptidase, peptidase S26 239 286 3.4E-8 T 23-04-2016 IPR019533 Peptidase S26 BUMPUSDA_RS00965 9eafbff68836e8b8fc8d1f933ecaf956 362 PANTHER PTHR23305 1 362 3.8E-158 T 23-04-2016 BUMPUSDA_RS00965 9eafbff68836e8b8fc8d1f933ecaf956 362 Gene3D G3DSA:1.10.150.300 132 200 2.5E-17 T 23-04-2016 IPR023192 TGS-like domain BUMPUSDA_RS00965 9eafbff68836e8b8fc8d1f933ecaf956 362 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 1.5E-33 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 BUMPUSDA_RS00965 9eafbff68836e8b8fc8d1f933ecaf956 362 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 1.5E-33 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 BUMPUSDA_RS00965 9eafbff68836e8b8fc8d1f933ecaf956 362 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.5E-33 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 BUMPUSDA_RS00965 9eafbff68836e8b8fc8d1f933ecaf956 362 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 1.5E-33 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 BUMPUSDA_RS00965 9eafbff68836e8b8fc8d1f933ecaf956 362 Gene3D G3DSA:3.40.50.300 201 266 1.5E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS00965 9eafbff68836e8b8fc8d1f933ecaf956 362 Gene3D G3DSA:3.40.50.300 4 131 1.5E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS00965 9eafbff68836e8b8fc8d1f933ecaf956 362 Gene3D G3DSA:3.10.20.30 267 361 7.4E-39 T 23-04-2016 IPR012675 Beta-grasp domain BUMPUSDA_RS00965 9eafbff68836e8b8fc8d1f933ecaf956 362 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 361 5.7E-133 T 23-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 BUMPUSDA_RS00965 9eafbff68836e8b8fc8d1f933ecaf956 362 Pfam PF06071 Protein of unknown function (DUF933) 278 361 5.3E-33 T 23-04-2016 IPR013029 Domain of unknown function DUF933 BUMPUSDA_RS00965 9eafbff68836e8b8fc8d1f933ecaf956 362 SUPERFAMILY SSF81271 278 358 1.05E-29 T 23-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 BUMPUSDA_RS00965 9eafbff68836e8b8fc8d1f933ecaf956 362 Pfam PF01926 50S ribosome-binding GTPase 5 119 2.7E-22 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 BUMPUSDA_RS00965 9eafbff68836e8b8fc8d1f933ecaf956 362 PANTHER PTHR23305:SF12 1 362 3.8E-158 T 23-04-2016 BUMPUSDA_RS00965 9eafbff68836e8b8fc8d1f933ecaf956 362 PIRSF PIRSF006641 1 362 2.6E-145 T 23-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 BUMPUSDA_RS00965 9eafbff68836e8b8fc8d1f933ecaf956 362 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 362 41.77 T 23-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 BUMPUSDA_RS00965 9eafbff68836e8b8fc8d1f933ecaf956 362 SUPERFAMILY SSF52540 3 299 5.43E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS03055 43fc5e1eb744c367755a373b3b087280 673 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 3 666 3.8E-292 T 23-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 BUMPUSDA_RS03055 43fc5e1eb744c367755a373b3b087280 673 Gene3D G3DSA:1.10.486.10 383 525 2.9E-32 T 23-04-2016 BUMPUSDA_RS03055 43fc5e1eb744c367755a373b3b087280 673 SUPERFAMILY SSF52540 2 639 9.62E-147 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS03055 43fc5e1eb744c367755a373b3b087280 673 PANTHER PTHR11070:SF19 1 644 9.6E-277 T 23-04-2016 BUMPUSDA_RS03055 43fc5e1eb744c367755a373b3b087280 673 Gene3D G3DSA:3.40.50.300 2 104 3.3E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS03055 43fc5e1eb744c367755a373b3b087280 673 Gene3D G3DSA:3.40.50.300 182 279 3.3E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS03055 43fc5e1eb744c367755a373b3b087280 673 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 669 35.846 T 23-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 BUMPUSDA_RS03055 43fc5e1eb744c367755a373b3b087280 673 Pfam PF13361 UvrD-like helicase C-terminal domain 271 614 3.7E-67 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 BUMPUSDA_RS03055 43fc5e1eb744c367755a373b3b087280 673 Pfam PF00580 UvrD/REP helicase N-terminal domain 4 266 1.1E-70 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 BUMPUSDA_RS03055 43fc5e1eb744c367755a373b3b087280 673 Gene3D G3DSA:1.10.10.160 108 181 2.2E-16 T 23-04-2016 IPR013986 DExx box DNA helicase domain BUMPUSDA_RS03055 43fc5e1eb744c367755a373b3b087280 673 PANTHER PTHR11070 1 644 9.6E-277 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 BUMPUSDA_RS03055 43fc5e1eb744c367755a373b3b087280 673 Gene3D G3DSA:3.40.50.300 551 641 2.0E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS03055 43fc5e1eb744c367755a373b3b087280 673 Gene3D G3DSA:3.40.50.300 280 382 2.0E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01830 2ae76fd55d423e7dcd6f9c0eaa15925b 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 1.6E-79 T 23-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS01830 2ae76fd55d423e7dcd6f9c0eaa15925b 466 SUPERFAMILY SSF50249 4 101 9.0E-16 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS01830 2ae76fd55d423e7dcd6f9c0eaa15925b 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 43.118 T 23-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 BUMPUSDA_RS01830 2ae76fd55d423e7dcd6f9c0eaa15925b 466 Gene3D G3DSA:3.30.930.10 108 462 2.2E-103 T 23-04-2016 BUMPUSDA_RS01830 2ae76fd55d423e7dcd6f9c0eaa15925b 466 SUPERFAMILY SSF55681 96 464 2.39E-93 T 23-04-2016 BUMPUSDA_RS01830 2ae76fd55d423e7dcd6f9c0eaa15925b 466 Pfam PF01336 OB-fold nucleic acid binding domain 21 99 1.1E-13 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 BUMPUSDA_RS01830 2ae76fd55d423e7dcd6f9c0eaa15925b 466 PANTHER PTHR22594:SF6 1 180 3.4E-215 T 23-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 BUMPUSDA_RS01830 2ae76fd55d423e7dcd6f9c0eaa15925b 466 PANTHER PTHR22594:SF6 199 464 3.4E-215 T 23-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 BUMPUSDA_RS01830 2ae76fd55d423e7dcd6f9c0eaa15925b 466 PANTHER PTHR22594 1 180 3.4E-215 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS01830 2ae76fd55d423e7dcd6f9c0eaa15925b 466 PANTHER PTHR22594 199 464 3.4E-215 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS01830 2ae76fd55d423e7dcd6f9c0eaa15925b 466 Gene3D G3DSA:2.40.50.140 16 100 1.9E-13 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS01830 2ae76fd55d423e7dcd6f9c0eaa15925b 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 4 466 3.7E-182 T 23-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 BUMPUSDA_RS01830 2ae76fd55d423e7dcd6f9c0eaa15925b 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 1.7E-14 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS01830 2ae76fd55d423e7dcd6f9c0eaa15925b 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 1.7E-14 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS01830 2ae76fd55d423e7dcd6f9c0eaa15925b 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 1.7E-14 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS01830 2ae76fd55d423e7dcd6f9c0eaa15925b 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 1.7E-14 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS00265 a4704d8526cf1fe245784aada0e44fbc 144 PANTHER PTHR12231:SF138 1 144 3.0E-14 T 23-04-2016 BUMPUSDA_RS00265 a4704d8526cf1fe245784aada0e44fbc 144 SUPERFAMILY SSF52821 16 141 4.58E-22 T 23-04-2016 IPR001763 Rhodanese-like domain BUMPUSDA_RS00265 a4704d8526cf1fe245784aada0e44fbc 144 SMART SM00450 40 138 1.2E-5 T 23-04-2016 IPR001763 Rhodanese-like domain BUMPUSDA_RS00265 a4704d8526cf1fe245784aada0e44fbc 144 Gene3D G3DSA:3.40.250.10 44 142 2.5E-16 T 23-04-2016 IPR001763 Rhodanese-like domain BUMPUSDA_RS00265 a4704d8526cf1fe245784aada0e44fbc 144 Pfam PF00581 Rhodanese-like domain 46 134 7.1E-9 T 23-04-2016 IPR001763 Rhodanese-like domain BUMPUSDA_RS00265 a4704d8526cf1fe245784aada0e44fbc 144 PANTHER PTHR12231 1 144 3.0E-14 T 23-04-2016 BUMPUSDA_RS02230 3bfc87c4ef197c5c8be99fffd508ccbc 415 SUPERFAMILY SSF50621 247 414 3.98E-53 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 BUMPUSDA_RS02230 3bfc87c4ef197c5c8be99fffd508ccbc 415 PANTHER PTHR11482 16 414 2.9E-125 T 23-04-2016 BUMPUSDA_RS02230 3bfc87c4ef197c5c8be99fffd508ccbc 415 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 276 391 1.1E-15 T 23-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 BUMPUSDA_RS02230 3bfc87c4ef197c5c8be99fffd508ccbc 415 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 45 271 3.7E-47 T 23-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 BUMPUSDA_RS02230 3bfc87c4ef197c5c8be99fffd508ccbc 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 261 280 2.1E-17 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 BUMPUSDA_RS02230 3bfc87c4ef197c5c8be99fffd508ccbc 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 372 385 2.1E-17 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 BUMPUSDA_RS02230 3bfc87c4ef197c5c8be99fffd508ccbc 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 51 69 2.1E-17 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 BUMPUSDA_RS02230 3bfc87c4ef197c5c8be99fffd508ccbc 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 178 191 2.1E-17 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 BUMPUSDA_RS02230 3bfc87c4ef197c5c8be99fffd508ccbc 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 71 83 2.1E-17 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 BUMPUSDA_RS02230 3bfc87c4ef197c5c8be99fffd508ccbc 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 289 307 3.9E-22 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 BUMPUSDA_RS02230 3bfc87c4ef197c5c8be99fffd508ccbc 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 382 404 3.9E-22 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 BUMPUSDA_RS02230 3bfc87c4ef197c5c8be99fffd508ccbc 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 69 86 3.9E-22 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 BUMPUSDA_RS02230 3bfc87c4ef197c5c8be99fffd508ccbc 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 155 164 3.9E-22 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 BUMPUSDA_RS02230 3bfc87c4ef197c5c8be99fffd508ccbc 415 PANTHER PTHR11482:SF5 16 414 2.9E-125 T 23-04-2016 BUMPUSDA_RS02230 3bfc87c4ef197c5c8be99fffd508ccbc 415 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 9 414 1.0E-114 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 BUMPUSDA_RS02230 3bfc87c4ef197c5c8be99fffd508ccbc 415 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 208 225 - T 23-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 BUMPUSDA_RS02230 3bfc87c4ef197c5c8be99fffd508ccbc 415 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 14 415 36.118 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 BUMPUSDA_RS02230 3bfc87c4ef197c5c8be99fffd508ccbc 415 SUPERFAMILY SSF51419 26 273 4.58E-50 T 23-04-2016 IPR029066 PLP-binding barrel BUMPUSDA_RS02230 3bfc87c4ef197c5c8be99fffd508ccbc 415 Gene3D G3DSA:2.40.37.10 260 414 1.2E-51 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 BUMPUSDA_RS02230 3bfc87c4ef197c5c8be99fffd508ccbc 415 Gene3D G3DSA:3.20.20.10 48 259 1.0E-51 T 23-04-2016 IPR029066 PLP-binding barrel BUMPUSDA_RS01900 fa9872a45084b850878751fefe53019c 89 SUPERFAMILY SSF47060 3 89 7.06E-30 T 23-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 BUMPUSDA_RS01900 fa9872a45084b850878751fefe53019c 89 PANTHER PTHR23321 1 89 4.4E-33 T 23-04-2016 BUMPUSDA_RS01900 fa9872a45084b850878751fefe53019c 89 Gene3D G3DSA:1.10.287.10 5 89 3.2E-33 T 23-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 BUMPUSDA_RS01900 fa9872a45084b850878751fefe53019c 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 7 89 3.5E-33 T 23-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS01900 fa9872a45084b850878751fefe53019c 89 Pfam PF00312 Ribosomal protein S15 9 88 1.6E-31 T 23-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS01900 fa9872a45084b850878751fefe53019c 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 20.196 T 23-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS01900 fa9872a45084b850878751fefe53019c 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 2.0E-24 T 23-04-2016 BUMPUSDA_RS01900 fa9872a45084b850878751fefe53019c 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 23-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS01900 fa9872a45084b850878751fefe53019c 89 SMART SM01387 8 88 9.6E-40 T 23-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02040 2c995ace54e58028fb3957657536a3df 881 SUPERFAMILY SSF55186 552 711 1.16E-47 T 23-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 BUMPUSDA_RS02040 2c995ace54e58028fb3957657536a3df 881 SMART SM00863 653 696 7.3E-20 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 BUMPUSDA_RS02040 2c995ace54e58028fb3957657536a3df 881 Pfam PF01411 tRNA synthetases class II (A) 7 555 6.7E-200 T 23-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 BUMPUSDA_RS02040 2c995ace54e58028fb3957657536a3df 881 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 653 696 5.5E-18 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 BUMPUSDA_RS02040 2c995ace54e58028fb3957657536a3df 881 SUPERFAMILY SSF101353 257 465 4.71E-55 T 23-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 BUMPUSDA_RS02040 2c995ace54e58028fb3957657536a3df 881 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 875 152.276 T 23-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 BUMPUSDA_RS02040 2c995ace54e58028fb3957657536a3df 881 SUPERFAMILY SSF50447 457 550 1.66E-14 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain BUMPUSDA_RS02040 2c995ace54e58028fb3957657536a3df 881 PANTHER PTHR11777 1 876 0.0 T 23-04-2016 BUMPUSDA_RS02040 2c995ace54e58028fb3957657536a3df 881 Pfam PF02272 DHHA1 domain 800 865 5.8E-6 T 23-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 BUMPUSDA_RS02040 2c995ace54e58028fb3957657536a3df 881 SUPERFAMILY SSF55681 4 255 3.98E-103 T 23-04-2016 BUMPUSDA_RS02040 2c995ace54e58028fb3957657536a3df 881 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 854 2.6E-282 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 BUMPUSDA_RS02040 2c995ace54e58028fb3957657536a3df 881 PANTHER PTHR11777:SF9 1 876 0.0 T 23-04-2016 BUMPUSDA_RS02040 2c995ace54e58028fb3957657536a3df 881 Gene3D G3DSA:3.30.930.10 4 251 6.8E-117 T 23-04-2016 BUMPUSDA_RS02040 2c995ace54e58028fb3957657536a3df 881 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 2.4E-30 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 BUMPUSDA_RS02040 2c995ace54e58028fb3957657536a3df 881 PRINTS PR00980 Alanyl-tRNA synthetase signature 282 298 2.4E-30 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 BUMPUSDA_RS02040 2c995ace54e58028fb3957657536a3df 881 PRINTS PR00980 Alanyl-tRNA synthetase signature 306 319 2.4E-30 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 BUMPUSDA_RS02040 2c995ace54e58028fb3957657536a3df 881 PRINTS PR00980 Alanyl-tRNA synthetase signature 209 220 2.4E-30 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 BUMPUSDA_RS02040 2c995ace54e58028fb3957657536a3df 881 PRINTS PR00980 Alanyl-tRNA synthetase signature 236 249 2.4E-30 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 BUMPUSDA_RS00795 8468ab38b0b8423ce90aafee0e86a312 444 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 175 190 - T 23-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 BUMPUSDA_RS00795 8468ab38b0b8423ce90aafee0e86a312 444 SUPERFAMILY SSF142019 21 243 7.59E-79 T 23-04-2016 BUMPUSDA_RS00795 8468ab38b0b8423ce90aafee0e86a312 444 PANTHER PTHR11780:SF10 3 424 4.0E-198 T 23-04-2016 BUMPUSDA_RS00795 8468ab38b0b8423ce90aafee0e86a312 444 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 350 361 - T 23-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 BUMPUSDA_RS00795 8468ab38b0b8423ce90aafee0e86a312 444 SUPERFAMILY SSF142984 249 331 1.05E-18 T 23-04-2016 BUMPUSDA_RS00795 8468ab38b0b8423ce90aafee0e86a312 444 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 341 422 1.9E-24 T 23-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 BUMPUSDA_RS00795 8468ab38b0b8423ce90aafee0e86a312 444 SUPERFAMILY SSF140490 334 428 6.15E-29 T 23-04-2016 BUMPUSDA_RS00795 8468ab38b0b8423ce90aafee0e86a312 444 PANTHER PTHR11780 3 424 4.0E-198 T 23-04-2016 BUMPUSDA_RS00795 8468ab38b0b8423ce90aafee0e86a312 444 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 13 424 8.8E-192 T 23-04-2016 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 BUMPUSDA_RS00795 8468ab38b0b8423ce90aafee0e86a312 444 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 54 227 2.6E-44 T 23-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain BUMPUSDA_RS00795 8468ab38b0b8423ce90aafee0e86a312 444 SMART SM00928 337 382 5.6E-18 T 23-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 BUMPUSDA_RS01940 cca22cdc2bc7eb7800cadfc693343c90 206 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 11 206 25.5 T 23-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 BUMPUSDA_RS01940 cca22cdc2bc7eb7800cadfc693343c90 206 PIRSF PIRSF005461 1 206 7.7E-78 T 23-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 BUMPUSDA_RS01940 cca22cdc2bc7eb7800cadfc693343c90 206 PANTHER PTHR10920 1 205 5.9E-102 T 23-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 BUMPUSDA_RS01940 cca22cdc2bc7eb7800cadfc693343c90 206 PANTHER PTHR10920:SF20 1 205 5.9E-102 T 23-04-2016 BUMPUSDA_RS01940 cca22cdc2bc7eb7800cadfc693343c90 206 Gene3D G3DSA:3.40.50.150 3 205 1.1E-60 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BUMPUSDA_RS01940 cca22cdc2bc7eb7800cadfc693343c90 206 Pfam PF01728 FtsJ-like methyltransferase 32 205 5.1E-54 T 23-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 BUMPUSDA_RS01940 cca22cdc2bc7eb7800cadfc693343c90 206 SUPERFAMILY SSF53335 31 204 3.57E-36 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BUMPUSDA_RS00460 f3cf8bc71804b6833b3ebe615e3203c9 408 PANTHER PTHR11712 2 408 4.9E-121 T 23-04-2016 BUMPUSDA_RS00460 f3cf8bc71804b6833b3ebe615e3203c9 408 Gene3D G3DSA:3.40.47.10 6 262 4.9E-47 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 BUMPUSDA_RS00460 f3cf8bc71804b6833b3ebe615e3203c9 408 Gene3D G3DSA:3.40.47.10 267 408 5.7E-44 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 BUMPUSDA_RS00460 f3cf8bc71804b6833b3ebe615e3203c9 408 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 257 365 3.6E-28 T 23-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal BUMPUSDA_RS00460 f3cf8bc71804b6833b3ebe615e3203c9 408 SUPERFAMILY SSF53901 218 408 1.41E-56 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 BUMPUSDA_RS00460 f3cf8bc71804b6833b3ebe615e3203c9 408 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 157 173 - T 23-04-2016 IPR018201 Beta-ketoacyl synthase, active site BUMPUSDA_RS00460 f3cf8bc71804b6833b3ebe615e3203c9 408 SUPERFAMILY SSF53901 2 256 4.12E-51 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 BUMPUSDA_RS00460 f3cf8bc71804b6833b3ebe615e3203c9 408 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 247 1.1E-34 T 23-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal BUMPUSDA_RS00460 f3cf8bc71804b6833b3ebe615e3203c9 408 SMART SM00825 Beta-ketoacyl synthase 4 408 4.4E-11 T 23-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BUMPUSDA_RS03150 da2dfe4f41ab7832b0002e160df56f26 256 SUPERFAMILY SSF56281 4 250 3.8E-55 T 23-04-2016 IPR001279 Metallo-beta-lactamase BUMPUSDA_RS03150 da2dfe4f41ab7832b0002e160df56f26 256 Gene3D G3DSA:3.60.15.10 6 250 2.9E-65 T 23-04-2016 IPR001279 Metallo-beta-lactamase BUMPUSDA_RS03150 da2dfe4f41ab7832b0002e160df56f26 256 SMART SM00849 11 165 1.1E-28 T 23-04-2016 IPR001279 Metallo-beta-lactamase BUMPUSDA_RS03150 da2dfe4f41ab7832b0002e160df56f26 256 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 250 5.6E-84 T 23-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 BUMPUSDA_RS03150 da2dfe4f41ab7832b0002e160df56f26 256 PANTHER PTHR11935:SF7 1 250 8.8E-77 T 23-04-2016 BUMPUSDA_RS03150 da2dfe4f41ab7832b0002e160df56f26 256 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 166 250 1.2E-16 T 23-04-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 BUMPUSDA_RS03150 da2dfe4f41ab7832b0002e160df56f26 256 PANTHER PTHR11935 1 250 8.8E-77 T 23-04-2016 BUMPUSDA_RS03150 da2dfe4f41ab7832b0002e160df56f26 256 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 250 39.354 T 23-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 BUMPUSDA_RS03150 da2dfe4f41ab7832b0002e160df56f26 256 Pfam PF00753 Metallo-beta-lactamase superfamily 14 139 2.5E-15 T 23-04-2016 IPR001279 Metallo-beta-lactamase BUMPUSDA_RS00700 3812744c011c8f6ae7af46d5b53965d3 255 Pfam PF09335 SNARE associated Golgi protein 36 159 4.6E-17 T 23-04-2016 IPR032816 SNARE associated Golgi protein BUMPUSDA_RS00700 3812744c011c8f6ae7af46d5b53965d3 255 PANTHER PTHR30353 1 254 2.2E-103 T 23-04-2016 IPR032818 DedA family BUMPUSDA_RS00700 3812744c011c8f6ae7af46d5b53965d3 255 PANTHER PTHR30353:SF7 1 254 2.2E-103 T 23-04-2016 BUMPUSDA_RS02685 b9a4f598c9263633edb2a30722e94772 702 PANTHER PTHR23115:SF66 2 184 0.0 T 23-04-2016 BUMPUSDA_RS02685 b9a4f598c9263633edb2a30722e94772 702 PANTHER PTHR23115:SF66 310 700 0.0 T 23-04-2016 BUMPUSDA_RS02685 b9a4f598c9263633edb2a30722e94772 702 PANTHER PTHR23115:SF66 261 289 0.0 T 23-04-2016 BUMPUSDA_RS02685 b9a4f598c9263633edb2a30722e94772 702 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 701 0.0 T 23-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 BUMPUSDA_RS02685 b9a4f598c9263633edb2a30722e94772 702 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site BUMPUSDA_RS02685 b9a4f598c9263633edb2a30722e94772 702 Hamap MF_00054_B Elongation factor G [fusA]. 6 700 107.357 T 23-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 BUMPUSDA_RS02685 b9a4f598c9263633edb2a30722e94772 702 SMART SM00838 609 696 3.2E-55 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain BUMPUSDA_RS02685 b9a4f598c9263633edb2a30722e94772 702 Pfam PF03764 Elongation factor G, domain IV 486 606 1.4E-44 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 BUMPUSDA_RS02685 b9a4f598c9263633edb2a30722e94772 702 SUPERFAMILY SSF54211 486 608 4.05E-40 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold BUMPUSDA_RS02685 b9a4f598c9263633edb2a30722e94772 702 Gene3D G3DSA:3.30.70.870 413 487 1.0E-37 T 23-04-2016 BUMPUSDA_RS02685 b9a4f598c9263633edb2a30722e94772 702 Pfam PF00009 Elongation factor Tu GTP binding domain 9 287 8.1E-69 T 23-04-2016 BUMPUSDA_RS02685 b9a4f598c9263633edb2a30722e94772 702 Gene3D G3DSA:3.30.230.10 491 607 1.4E-44 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BUMPUSDA_RS02685 b9a4f598c9263633edb2a30722e94772 702 SUPERFAMILY SSF54980 609 699 7.19E-26 T 23-04-2016 IPR009022 Elongation factor G, III-V domain BUMPUSDA_RS02685 b9a4f598c9263633edb2a30722e94772 702 PANTHER PTHR23115 2 184 0.0 T 23-04-2016 BUMPUSDA_RS02685 b9a4f598c9263633edb2a30722e94772 702 PANTHER PTHR23115 310 700 0.0 T 23-04-2016 BUMPUSDA_RS02685 b9a4f598c9263633edb2a30722e94772 702 PANTHER PTHR23115 261 289 0.0 T 23-04-2016 BUMPUSDA_RS02685 b9a4f598c9263633edb2a30722e94772 702 Gene3D G3DSA:3.30.70.240 608 692 8.6E-30 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain BUMPUSDA_RS02685 b9a4f598c9263633edb2a30722e94772 702 Pfam PF14492 Elongation Factor G, domain II 411 485 3.9E-34 T 23-04-2016 IPR009022 Elongation factor G, III-V domain BUMPUSDA_RS02685 b9a4f598c9263633edb2a30722e94772 702 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.5E-16 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BUMPUSDA_RS02685 b9a4f598c9263633edb2a30722e94772 702 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.5E-16 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BUMPUSDA_RS02685 b9a4f598c9263633edb2a30722e94772 702 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.5E-16 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BUMPUSDA_RS02685 b9a4f598c9263633edb2a30722e94772 702 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-16 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BUMPUSDA_RS02685 b9a4f598c9263633edb2a30722e94772 702 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.5E-16 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BUMPUSDA_RS02685 b9a4f598c9263633edb2a30722e94772 702 SMART SM00889 487 607 1.3E-70 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 BUMPUSDA_RS02685 b9a4f598c9263633edb2a30722e94772 702 SUPERFAMILY SSF52540 6 287 1.06E-103 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02685 b9a4f598c9263633edb2a30722e94772 702 SUPERFAMILY SSF50447 271 411 7.73E-36 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain BUMPUSDA_RS02685 b9a4f598c9263633edb2a30722e94772 702 Pfam PF03144 Elongation factor Tu domain 2 331 398 5.2E-18 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 BUMPUSDA_RS02685 b9a4f598c9263633edb2a30722e94772 702 Gene3D G3DSA:3.40.50.300 6 293 2.6E-100 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02685 b9a4f598c9263633edb2a30722e94772 702 SUPERFAMILY SSF54980 409 487 7.55E-25 T 23-04-2016 IPR009022 Elongation factor G, III-V domain BUMPUSDA_RS02685 b9a4f598c9263633edb2a30722e94772 702 Pfam PF00679 Elongation factor G C-terminus 609 692 1.2E-27 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain BUMPUSDA_RS02685 b9a4f598c9263633edb2a30722e94772 702 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 5.1E-32 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 BUMPUSDA_RS02685 b9a4f598c9263633edb2a30722e94772 702 Gene3D G3DSA:2.40.30.10 312 412 5.3E-38 T 23-04-2016 BUMPUSDA_RS00275 3ac824b6463f468f5e72baefd0764bc8 274 SMART SM00971 9 113 2.2E-37 T 23-04-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 BUMPUSDA_RS00275 3ac824b6463f468f5e72baefd0764bc8 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 203 231 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 BUMPUSDA_RS00275 3ac824b6463f468f5e72baefd0764bc8 274 PANTHER PTHR23416 5 245 3.9E-107 T 23-04-2016 BUMPUSDA_RS00275 3ac824b6463f468f5e72baefd0764bc8 274 Pfam PF06426 Serine acetyltransferase, N-terminal 9 113 5.3E-30 T 23-04-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 BUMPUSDA_RS00275 3ac824b6463f468f5e72baefd0764bc8 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 194 227 1.3E-4 T 23-04-2016 IPR001451 Hexapeptide repeat BUMPUSDA_RS00275 3ac824b6463f468f5e72baefd0764bc8 274 SUPERFAMILY SSF51161 6 252 9.56E-59 T 23-04-2016 IPR011004 Trimeric LpxA-like BUMPUSDA_RS00275 3ac824b6463f468f5e72baefd0764bc8 274 Gene3D G3DSA:1.10.3130.10 7 141 6.3E-37 T 23-04-2016 BUMPUSDA_RS00275 3ac824b6463f468f5e72baefd0764bc8 274 Gene3D G3DSA:2.160.10.10 142 254 1.7E-29 T 23-04-2016 BUMPUSDA_RS00275 3ac824b6463f468f5e72baefd0764bc8 274 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 81 243 1.5E-71 T 23-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 BUMPUSDA_RS00275 3ac824b6463f468f5e72baefd0764bc8 274 PANTHER PTHR23416:SF2 5 245 3.9E-107 T 23-04-2016 BUMPUSDA_RS00595 46a93ef280c7701bd3d8dc2d00b11421 211 TIGRFAM TIGR01083 nth: endonuclease III 4 194 1.3E-72 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 BUMPUSDA_RS00595 46a93ef280c7701bd3d8dc2d00b11421 211 PIRSF PIRSF001435 1 211 1.4E-43 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 BUMPUSDA_RS00595 46a93ef280c7701bd3d8dc2d00b11421 211 Gene3D G3DSA:1.10.1670.10 123 208 3.7E-31 T 23-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal BUMPUSDA_RS00595 46a93ef280c7701bd3d8dc2d00b11421 211 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 23-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 BUMPUSDA_RS00595 46a93ef280c7701bd3d8dc2d00b11421 211 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 167 4.7E-18 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 BUMPUSDA_RS00595 46a93ef280c7701bd3d8dc2d00b11421 211 Hamap MF_00942 Endonuclease III [nth]. 1 209 34.065 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 BUMPUSDA_RS00595 46a93ef280c7701bd3d8dc2d00b11421 211 SMART SM00478 38 185 8.1E-46 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 BUMPUSDA_RS00595 46a93ef280c7701bd3d8dc2d00b11421 211 Pfam PF00633 Helix-hairpin-helix motif 99 127 1.6E-8 T 23-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 BUMPUSDA_RS00595 46a93ef280c7701bd3d8dc2d00b11421 211 SUPERFAMILY SSF48150 1 209 2.04E-61 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 BUMPUSDA_RS00595 46a93ef280c7701bd3d8dc2d00b11421 211 PANTHER PTHR10359 1 211 4.9E-71 T 23-04-2016 BUMPUSDA_RS00595 46a93ef280c7701bd3d8dc2d00b11421 211 Gene3D G3DSA:1.10.340.30 27 122 1.5E-27 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 BUMPUSDA_RS00595 46a93ef280c7701bd3d8dc2d00b11421 211 PANTHER PTHR10359:SF18 1 211 4.9E-71 T 23-04-2016 BUMPUSDA_RS01170 83acdece7e9694977f4ff4b9d698ab3d 267 Gene3D G3DSA:1.10.8.10 4 53 4.6E-18 T 23-04-2016 BUMPUSDA_RS01170 83acdece7e9694977f4ff4b9d698ab3d 267 ProSitePatterns PS01127 Elongation factor Ts signature 2. 76 86 - T 23-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 BUMPUSDA_RS01170 83acdece7e9694977f4ff4b9d698ab3d 267 Gene3D G3DSA:1.10.286.20 186 226 2.7E-10 T 23-04-2016 BUMPUSDA_RS01170 83acdece7e9694977f4ff4b9d698ab3d 267 PANTHER PTHR11741 2 266 3.6E-80 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 BUMPUSDA_RS01170 83acdece7e9694977f4ff4b9d698ab3d 267 Pfam PF00889 Elongation factor TS 72 264 2.7E-57 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 BUMPUSDA_RS01170 83acdece7e9694977f4ff4b9d698ab3d 267 Gene3D G3DSA:3.30.479.20 168 183 7.9E-27 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 BUMPUSDA_RS01170 83acdece7e9694977f4ff4b9d698ab3d 267 Gene3D G3DSA:3.30.479.20 229 266 7.9E-27 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 BUMPUSDA_RS01170 83acdece7e9694977f4ff4b9d698ab3d 267 Gene3D G3DSA:3.30.479.20 58 94 7.9E-27 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 BUMPUSDA_RS01170 83acdece7e9694977f4ff4b9d698ab3d 267 SUPERFAMILY SSF54713 58 93 1.21E-40 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 BUMPUSDA_RS01170 83acdece7e9694977f4ff4b9d698ab3d 267 SUPERFAMILY SSF54713 167 264 1.21E-40 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 BUMPUSDA_RS01170 83acdece7e9694977f4ff4b9d698ab3d 267 SUPERFAMILY SSF46934 5 55 1.94E-13 T 23-04-2016 IPR009060 UBA-like GO:0005515 BUMPUSDA_RS01170 83acdece7e9694977f4ff4b9d698ab3d 267 Hamap MF_00050 Elongation factor Ts [tsf]. 1 267 49.74 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 BUMPUSDA_RS01170 83acdece7e9694977f4ff4b9d698ab3d 267 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 4 266 6.5E-81 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 BUMPUSDA_RS01170 83acdece7e9694977f4ff4b9d698ab3d 267 ProSitePatterns PS01126 Elongation factor Ts signature 1. 13 28 - T 23-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 BUMPUSDA_RS00505 86842c6110f8315b13f33528ab3ecd27 361 Gene3D G3DSA:3.90.1150.10 257 353 1.6E-21 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 BUMPUSDA_RS00505 86842c6110f8315b13f33528ab3ecd27 361 PANTHER PTHR11751:SF398 53 353 1.3E-87 T 23-04-2016 BUMPUSDA_RS00505 86842c6110f8315b13f33528ab3ecd27 361 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 212 221 - T 23-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 BUMPUSDA_RS00505 86842c6110f8315b13f33528ab3ecd27 361 Pfam PF00155 Aminotransferase class I and II 47 352 5.2E-53 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BUMPUSDA_RS00505 86842c6110f8315b13f33528ab3ecd27 361 PANTHER PTHR11751 53 353 1.3E-87 T 23-04-2016 BUMPUSDA_RS00505 86842c6110f8315b13f33528ab3ecd27 361 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 11 353 5.9E-120 T 23-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 BUMPUSDA_RS00505 86842c6110f8315b13f33528ab3ecd27 361 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 8 356 51.435 T 23-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 BUMPUSDA_RS00505 86842c6110f8315b13f33528ab3ecd27 361 SUPERFAMILY SSF53383 26 353 2.45E-71 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase BUMPUSDA_RS00505 86842c6110f8315b13f33528ab3ecd27 361 Gene3D G3DSA:3.40.640.10 50 256 2.4E-65 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 BUMPUSDA_RS01995 66d6d4ef05eefcd9a4ddc3a38ea1ccec 84 Gene3D G3DSA:3.30.1320.10 1 77 1.2E-31 T 23-04-2016 IPR023803 Ribosomal protein S16 domain BUMPUSDA_RS01995 66d6d4ef05eefcd9a4ddc3a38ea1ccec 84 PANTHER PTHR12919 1 78 3.6E-34 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS01995 66d6d4ef05eefcd9a4ddc3a38ea1ccec 84 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 23.278 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS01995 66d6d4ef05eefcd9a4ddc3a38ea1ccec 84 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 76 4.4E-29 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS01995 66d6d4ef05eefcd9a4ddc3a38ea1ccec 84 Pfam PF00886 Ribosomal protein S16 8 68 9.9E-25 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS01995 66d6d4ef05eefcd9a4ddc3a38ea1ccec 84 SUPERFAMILY SSF54565 1 79 1.31E-28 T 23-04-2016 IPR023803 Ribosomal protein S16 domain BUMPUSDA_RS01140 98fc1de0cde41d160d846f7fcf12726f 571 Gene3D G3DSA:3.40.50.1220 189 353 3.4E-66 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain BUMPUSDA_RS01140 98fc1de0cde41d160d846f7fcf12726f 571 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 428 447 - T 23-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 BUMPUSDA_RS01140 98fc1de0cde41d160d846f7fcf12726f 571 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 169 2.9E-57 T 23-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 BUMPUSDA_RS01140 98fc1de0cde41d160d846f7fcf12726f 571 Gene3D G3DSA:3.40.50.970 354 555 9.8E-73 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold BUMPUSDA_RS01140 98fc1de0cde41d160d846f7fcf12726f 571 SUPERFAMILY SSF52518 368 568 5.53E-66 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold BUMPUSDA_RS01140 98fc1de0cde41d160d846f7fcf12726f 571 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 391 542 3.3E-48 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 BUMPUSDA_RS01140 98fc1de0cde41d160d846f7fcf12726f 571 SUPERFAMILY SSF52518 3 182 3.37E-63 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold BUMPUSDA_RS01140 98fc1de0cde41d160d846f7fcf12726f 571 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 4.8E-45 T 23-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 BUMPUSDA_RS01140 98fc1de0cde41d160d846f7fcf12726f 571 PANTHER PTHR18968:SF116 2 571 0.0 T 23-04-2016 BUMPUSDA_RS01140 98fc1de0cde41d160d846f7fcf12726f 571 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 565 3.4E-272 T 23-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 BUMPUSDA_RS01140 98fc1de0cde41d160d846f7fcf12726f 571 Gene3D G3DSA:3.40.50.970 4 177 4.9E-73 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold BUMPUSDA_RS01140 98fc1de0cde41d160d846f7fcf12726f 571 SUPERFAMILY SSF52467 188 358 6.37E-64 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain BUMPUSDA_RS01140 98fc1de0cde41d160d846f7fcf12726f 571 PANTHER PTHR18968 2 571 0.0 T 23-04-2016 BUMPUSDA_RS01635 f9458d1baffb25d546492b2cad2c8b9a 480 SUPERFAMILY SSF52935 329 479 7.06E-37 T 23-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 BUMPUSDA_RS01635 f9458d1baffb25d546492b2cad2c8b9a 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 479 3.5E-161 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 BUMPUSDA_RS01635 f9458d1baffb25d546492b2cad2c8b9a 480 Gene3D G3DSA:3.20.20.60 6 76 9.2E-90 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 BUMPUSDA_RS01635 f9458d1baffb25d546492b2cad2c8b9a 480 Gene3D G3DSA:3.20.20.60 172 331 9.2E-90 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 BUMPUSDA_RS01635 f9458d1baffb25d546492b2cad2c8b9a 480 PRINTS PR01050 Pyruvate kinase family signature 63 79 5.8E-48 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 BUMPUSDA_RS01635 f9458d1baffb25d546492b2cad2c8b9a 480 PRINTS PR01050 Pyruvate kinase family signature 250 274 5.8E-48 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 BUMPUSDA_RS01635 f9458d1baffb25d546492b2cad2c8b9a 480 PRINTS PR01050 Pyruvate kinase family signature 190 204 5.8E-48 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 BUMPUSDA_RS01635 f9458d1baffb25d546492b2cad2c8b9a 480 PRINTS PR01050 Pyruvate kinase family signature 300 318 5.8E-48 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 BUMPUSDA_RS01635 f9458d1baffb25d546492b2cad2c8b9a 480 PRINTS PR01050 Pyruvate kinase family signature 275 299 5.8E-48 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 BUMPUSDA_RS01635 f9458d1baffb25d546492b2cad2c8b9a 480 PRINTS PR01050 Pyruvate kinase family signature 223 249 5.8E-48 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 BUMPUSDA_RS01635 f9458d1baffb25d546492b2cad2c8b9a 480 PRINTS PR01050 Pyruvate kinase family signature 319 335 5.8E-48 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 BUMPUSDA_RS01635 f9458d1baffb25d546492b2cad2c8b9a 480 Gene3D G3DSA:3.40.1380.20 332 479 1.2E-37 T 23-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 BUMPUSDA_RS01635 f9458d1baffb25d546492b2cad2c8b9a 480 SUPERFAMILY SSF51621 3 78 2.61E-81 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 BUMPUSDA_RS01635 f9458d1baffb25d546492b2cad2c8b9a 480 SUPERFAMILY SSF51621 160 345 2.61E-81 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 BUMPUSDA_RS01635 f9458d1baffb25d546492b2cad2c8b9a 480 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 23-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 BUMPUSDA_RS01635 f9458d1baffb25d546492b2cad2c8b9a 480 SUPERFAMILY SSF50800 74 168 4.01E-24 T 23-04-2016 IPR011037 Pyruvate kinase-like, insert domain BUMPUSDA_RS01635 f9458d1baffb25d546492b2cad2c8b9a 480 PANTHER PTHR11817:SF17 4 479 9.5E-272 T 23-04-2016 BUMPUSDA_RS01635 f9458d1baffb25d546492b2cad2c8b9a 480 Gene3D G3DSA:2.40.33.10 77 170 4.4E-25 T 23-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 BUMPUSDA_RS01635 f9458d1baffb25d546492b2cad2c8b9a 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 477 9.4E-29 T 23-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 BUMPUSDA_RS01635 f9458d1baffb25d546492b2cad2c8b9a 480 Pfam PF00224 Pyruvate kinase, barrel domain 6 344 8.6E-118 T 23-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 BUMPUSDA_RS01635 f9458d1baffb25d546492b2cad2c8b9a 480 PANTHER PTHR11817 4 479 9.5E-272 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 BUMPUSDA_RS01835 53642b56636b4e3478900a85753c200a 395 Gene3D G3DSA:3.20.140.10 7 393 2.1E-133 T 23-04-2016 BUMPUSDA_RS01835 53642b56636b4e3478900a85753c200a 395 SUPERFAMILY SSF51690 120 393 1.96E-80 T 23-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 BUMPUSDA_RS01835 53642b56636b4e3478900a85753c200a 395 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 170 394 1.4E-76 T 23-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 BUMPUSDA_RS01835 53642b56636b4e3478900a85753c200a 395 PANTHER PTHR11098 1 394 7.6E-189 T 23-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 BUMPUSDA_RS01835 53642b56636b4e3478900a85753c200a 395 PANTHER PTHR11098:SF14 1 394 7.6E-189 T 23-04-2016 BUMPUSDA_RS01835 53642b56636b4e3478900a85753c200a 395 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 5 395 46.306 T 23-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 BUMPUSDA_RS01835 53642b56636b4e3478900a85753c200a 395 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 8 394 1.4E-139 T 23-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 BUMPUSDA_RS01835 53642b56636b4e3478900a85753c200a 395 SUPERFAMILY SSF54675 3 135 6.77E-39 T 23-04-2016 BUMPUSDA_RS01835 53642b56636b4e3478900a85753c200a 395 PIRSF PIRSF000484 3 385 7.6E-56 T 23-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 BUMPUSDA_RS01535 195a854ac37ffd659b9f2f9ec3c75a60 381 Gene3D G3DSA:3.30.559.10 147 378 2.5E-83 T 23-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain BUMPUSDA_RS01535 195a854ac37ffd659b9f2f9ec3c75a60 381 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site BUMPUSDA_RS01535 195a854ac37ffd659b9f2f9ec3c75a60 381 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 151 378 1.2E-76 T 23-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 BUMPUSDA_RS01535 195a854ac37ffd659b9f2f9ec3c75a60 381 Gene3D G3DSA:2.40.50.100 2 79 5.4E-22 T 23-04-2016 BUMPUSDA_RS01535 195a854ac37ffd659b9f2f9ec3c75a60 381 SUPERFAMILY SSF51230 3 78 1.57E-22 T 23-04-2016 IPR011053 Single hybrid motif BUMPUSDA_RS01535 195a854ac37ffd659b9f2f9ec3c75a60 381 PANTHER PTHR23151:SF47 4 381 8.9E-180 T 23-04-2016 BUMPUSDA_RS01535 195a854ac37ffd659b9f2f9ec3c75a60 381 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 380 1.2E-159 T 23-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 BUMPUSDA_RS01535 195a854ac37ffd659b9f2f9ec3c75a60 381 SUPERFAMILY SSF52777 151 380 1.56E-80 T 23-04-2016 BUMPUSDA_RS01535 195a854ac37ffd659b9f2f9ec3c75a60 381 Pfam PF00364 Biotin-requiring enzyme 6 77 2.1E-15 T 23-04-2016 IPR000089 Biotin/lipoyl attachment BUMPUSDA_RS01535 195a854ac37ffd659b9f2f9ec3c75a60 381 PANTHER PTHR23151 4 381 8.9E-180 T 23-04-2016 BUMPUSDA_RS00955 8a02335e31b79d707b941d448f1c4a87 203 PANTHER PTHR11404 1 203 7.6E-85 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 BUMPUSDA_RS00955 8a02335e31b79d707b941d448f1c4a87 203 Gene3D G3DSA:1.10.287.990 20 89 4.3E-23 T 23-04-2016 BUMPUSDA_RS00955 8a02335e31b79d707b941d448f1c4a87 203 PIRSF PIRSF000349 1 203 2.2E-70 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 BUMPUSDA_RS00955 8a02335e31b79d707b941d448f1c4a87 203 SUPERFAMILY SSF46609 1 89 2.23E-30 T 23-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 BUMPUSDA_RS00955 8a02335e31b79d707b941d448f1c4a87 203 SUPERFAMILY SSF54719 92 202 1.28E-41 T 23-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 BUMPUSDA_RS00955 8a02335e31b79d707b941d448f1c4a87 203 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 167 174 - T 23-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 BUMPUSDA_RS00955 8a02335e31b79d707b941d448f1c4a87 203 PRINTS PR01703 Manganese superoxide dismutase signature 123 131 3.3E-25 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 BUMPUSDA_RS00955 8a02335e31b79d707b941d448f1c4a87 203 PRINTS PR01703 Manganese superoxide dismutase signature 72 85 3.3E-25 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 BUMPUSDA_RS00955 8a02335e31b79d707b941d448f1c4a87 203 PRINTS PR01703 Manganese superoxide dismutase signature 165 177 3.3E-25 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 BUMPUSDA_RS00955 8a02335e31b79d707b941d448f1c4a87 203 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 3.3E-25 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 BUMPUSDA_RS00955 8a02335e31b79d707b941d448f1c4a87 203 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 3.3E-25 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 BUMPUSDA_RS00955 8a02335e31b79d707b941d448f1c4a87 203 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 95 200 7.3E-37 T 23-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 BUMPUSDA_RS00955 8a02335e31b79d707b941d448f1c4a87 203 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 89 8.2E-28 T 23-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 BUMPUSDA_RS00180 0ade1dd0ac6e2f458644ed2ca3b90371 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 9.6E-43 T 23-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS00180 0ade1dd0ac6e2f458644ed2ca3b90371 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 38 1.6E-12 T 23-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS00180 0ade1dd0ac6e2f458644ed2ca3b90371 122 SUPERFAMILY SSF54736 51 122 3.14E-24 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like BUMPUSDA_RS00180 0ade1dd0ac6e2f458644ed2ca3b90371 122 Gene3D G3DSA:1.20.5.710 2 39 5.0E-18 T 23-04-2016 BUMPUSDA_RS00180 0ade1dd0ac6e2f458644ed2ca3b90371 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 122 23.237 T 23-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS00180 0ade1dd0ac6e2f458644ed2ca3b90371 122 Gene3D G3DSA:3.30.1390.10 50 122 5.8E-32 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like BUMPUSDA_RS00180 0ade1dd0ac6e2f458644ed2ca3b90371 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 57 122 9.0E-30 T 23-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 BUMPUSDA_RS00180 0ade1dd0ac6e2f458644ed2ca3b90371 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 2.7E-29 T 23-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 BUMPUSDA_RS00180 0ade1dd0ac6e2f458644ed2ca3b90371 122 SUPERFAMILY SSF48300 3 58 6.41E-13 T 23-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS00960 394ad88a2c5cdb9262c484fb58b3c10c 180 Pfam PF01195 Peptidyl-tRNA hydrolase 1 173 3.3E-44 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 BUMPUSDA_RS00960 394ad88a2c5cdb9262c484fb58b3c10c 180 PANTHER PTHR17224:SF1 1 173 8.4E-55 T 23-04-2016 BUMPUSDA_RS00960 394ad88a2c5cdb9262c484fb58b3c10c 180 SUPERFAMILY SSF53178 1 174 7.32E-55 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 BUMPUSDA_RS00960 394ad88a2c5cdb9262c484fb58b3c10c 180 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 178 28.023 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 BUMPUSDA_RS00960 394ad88a2c5cdb9262c484fb58b3c10c 180 PANTHER PTHR17224 1 173 8.4E-55 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 BUMPUSDA_RS00960 394ad88a2c5cdb9262c484fb58b3c10c 180 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 1 176 5.7E-52 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 BUMPUSDA_RS00960 394ad88a2c5cdb9262c484fb58b3c10c 180 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 106 116 - T 23-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 BUMPUSDA_RS00960 394ad88a2c5cdb9262c484fb58b3c10c 180 Gene3D G3DSA:3.40.50.1470 1 171 9.3E-53 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 BUMPUSDA_RS00455 bfe22bd95949ede3f63db79496d33115 286 Gene3D G3DSA:3.30.950.10 117 230 2.6E-37 T 23-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 BUMPUSDA_RS00455 bfe22bd95949ede3f63db79496d33115 286 PANTHER PTHR21091 7 214 7.2E-77 T 23-04-2016 BUMPUSDA_RS00455 bfe22bd95949ede3f63db79496d33115 286 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 86 97 - T 23-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 BUMPUSDA_RS00455 bfe22bd95949ede3f63db79496d33115 286 PIRSF PIRSF005917 1 283 6.7E-93 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 BUMPUSDA_RS00455 bfe22bd95949ede3f63db79496d33115 286 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 8 279 4.7E-83 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 BUMPUSDA_RS00455 bfe22bd95949ede3f63db79496d33115 286 PANTHER PTHR21091:SF18 7 214 7.2E-77 T 23-04-2016 BUMPUSDA_RS00455 bfe22bd95949ede3f63db79496d33115 286 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 9 204 9.3E-21 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 BUMPUSDA_RS00455 bfe22bd95949ede3f63db79496d33115 286 SUPERFAMILY SSF53790 7 227 1.1E-72 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 BUMPUSDA_RS00455 bfe22bd95949ede3f63db79496d33115 286 Gene3D G3DSA:3.40.1010.10 7 116 2.9E-11 T 23-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 BUMPUSDA_RS00455 bfe22bd95949ede3f63db79496d33115 286 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 8 229 34.229 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 BUMPUSDA_RS00170 d52646c166376402d0379dc65a2f4116 1410 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 1.0E-89 T 23-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 BUMPUSDA_RS00170 d52646c166376402d0379dc65a2f4116 1410 PANTHER PTHR19376 1177 1262 0.0 T 23-04-2016 BUMPUSDA_RS00170 d52646c166376402d0379dc65a2f4116 1410 PANTHER PTHR19376 4 551 0.0 T 23-04-2016 BUMPUSDA_RS00170 d52646c166376402d0379dc65a2f4116 1410 SMART SM00663 235 514 1.3E-184 T 23-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 BUMPUSDA_RS00170 d52646c166376402d0379dc65a2f4116 1410 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 6.9E-26 T 23-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 BUMPUSDA_RS00170 d52646c166376402d0379dc65a2f4116 1410 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1368 0.0 T 23-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BUMPUSDA_RS00170 d52646c166376402d0379dc65a2f4116 1410 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 3.8E-19 T 23-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 BUMPUSDA_RS00170 d52646c166376402d0379dc65a2f4116 1410 PANTHER PTHR19376:SF32 1177 1262 0.0 T 23-04-2016 BUMPUSDA_RS00170 d52646c166376402d0379dc65a2f4116 1410 PANTHER PTHR19376:SF32 4 551 0.0 T 23-04-2016 BUMPUSDA_RS00170 d52646c166376402d0379dc65a2f4116 1410 PANTHER PTHR19376 570 943 0.0 T 23-04-2016 BUMPUSDA_RS00170 d52646c166376402d0379dc65a2f4116 1410 Gene3D G3DSA:2.40.40.20 417 489 5.5E-37 T 23-04-2016 BUMPUSDA_RS00170 d52646c166376402d0379dc65a2f4116 1410 Gene3D G3DSA:2.40.40.20 349 376 5.5E-37 T 23-04-2016 BUMPUSDA_RS00170 d52646c166376402d0379dc65a2f4116 1410 PANTHER PTHR19376:SF32 570 943 0.0 T 23-04-2016 BUMPUSDA_RS00170 d52646c166376402d0379dc65a2f4116 1410 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1315 5.2E-77 T 23-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 BUMPUSDA_RS00170 d52646c166376402d0379dc65a2f4116 1410 Pfam PF00623 RNA polymerase Rpb1, domain 2 391 485 7.0E-27 T 23-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 BUMPUSDA_RS00170 d52646c166376402d0379dc65a2f4116 1410 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 395 7.6E-8 T 23-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 BUMPUSDA_RS00170 d52646c166376402d0379dc65a2f4116 1410 SUPERFAMILY SSF64484 16 944 0.0 T 23-04-2016 BUMPUSDA_RS00170 d52646c166376402d0379dc65a2f4116 1410 SUPERFAMILY SSF64484 1133 1373 0.0 T 23-04-2016 BUMPUSDA_RS00170 d52646c166376402d0379dc65a2f4116 1410 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1375 10.356 T 23-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BUMPUSDA_RS00170 d52646c166376402d0379dc65a2f4116 1410 PANTHER PTHR19376:SF32 1303 1398 0.0 T 23-04-2016 BUMPUSDA_RS00170 d52646c166376402d0379dc65a2f4116 1410 PANTHER PTHR19376:SF32 962 1157 0.0 T 23-04-2016 BUMPUSDA_RS00170 d52646c166376402d0379dc65a2f4116 1410 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 13 588 32.185 T 23-04-2016 BUMPUSDA_RS00170 d52646c166376402d0379dc65a2f4116 1410 PANTHER PTHR19376 1303 1398 0.0 T 23-04-2016 BUMPUSDA_RS00170 d52646c166376402d0379dc65a2f4116 1410 PANTHER PTHR19376 962 1157 0.0 T 23-04-2016 BUMPUSDA_RS00170 d52646c166376402d0379dc65a2f4116 1410 Gene3D G3DSA:2.40.50.100 1156 1209 6.4E-6 T 23-04-2016 BUMPUSDA_RS01795 0d079cfad5159ec46ae1b44782719aac 212 ProSitePatterns PS01331 Thymidylate kinase signature. 96 108 - T 23-04-2016 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 BUMPUSDA_RS01795 0d079cfad5159ec46ae1b44782719aac 212 SUPERFAMILY SSF52540 1 209 5.78E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01795 0d079cfad5159ec46ae1b44782719aac 212 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 199 1.2E-55 T 23-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 BUMPUSDA_RS01795 0d079cfad5159ec46ae1b44782719aac 212 PANTHER PTHR10344 3 209 2.4E-51 T 23-04-2016 BUMPUSDA_RS01795 0d079cfad5159ec46ae1b44782719aac 212 Pfam PF02223 Thymidylate kinase 9 199 6.9E-47 T 23-04-2016 BUMPUSDA_RS01795 0d079cfad5159ec46ae1b44782719aac 212 Hamap MF_00165 Thymidylate kinase [tmk]. 5 207 25.415 T 23-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 BUMPUSDA_RS01795 0d079cfad5159ec46ae1b44782719aac 212 Gene3D G3DSA:3.40.50.300 4 208 1.9E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02285 93f3bd75bb9aa23830eccd60397240d9 196 Pfam PF01914 MarC family integral membrane protein 2 194 2.5E-57 T 23-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 BUMPUSDA_RS02285 93f3bd75bb9aa23830eccd60397240d9 196 PANTHER PTHR33508 1 195 2.2E-85 T 23-04-2016 BUMPUSDA_RS02285 93f3bd75bb9aa23830eccd60397240d9 196 PANTHER PTHR33508:SF4 1 195 2.2E-85 T 23-04-2016 BUMPUSDA_RS02285 93f3bd75bb9aa23830eccd60397240d9 196 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 5 190 5.2E-29 T 23-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 BUMPUSDA_RS03100 75acb688a08674036a84bd1e935c7285 453 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 364 444 4.3E-23 T 23-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like BUMPUSDA_RS03100 75acb688a08674036a84bd1e935c7285 453 PANTHER PTHR11649:SF5 1 447 2.7E-121 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 BUMPUSDA_RS03100 75acb688a08674036a84bd1e935c7285 453 Pfam PF01926 50S ribosome-binding GTPase 5 121 4.0E-25 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 BUMPUSDA_RS03100 75acb688a08674036a84bd1e935c7285 453 Pfam PF01926 50S ribosome-binding GTPase 190 308 4.7E-23 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 BUMPUSDA_RS03100 75acb688a08674036a84bd1e935c7285 453 Gene3D G3DSA:3.40.50.300 3 159 1.3E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS03100 75acb688a08674036a84bd1e935c7285 453 Gene3D G3DSA:3.40.50.300 187 369 2.4E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS03100 75acb688a08674036a84bd1e935c7285 453 SUPERFAMILY SSF52540 5 161 1.4E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS03100 75acb688a08674036a84bd1e935c7285 453 SUPERFAMILY SSF52540 188 450 6.42E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS03100 75acb688a08674036a84bd1e935c7285 453 PIRSF PIRSF006485 1 452 4.0E-158 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 BUMPUSDA_RS03100 75acb688a08674036a84bd1e935c7285 453 Gene3D G3DSA:3.30.300.20 370 446 4.1E-22 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta BUMPUSDA_RS03100 75acb688a08674036a84bd1e935c7285 453 Hamap MF_00195 GTPase Der [der]. 2 447 34.204 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 BUMPUSDA_RS03100 75acb688a08674036a84bd1e935c7285 453 PANTHER PTHR11649 1 447 2.7E-121 T 23-04-2016 BUMPUSDA_RS03100 75acb688a08674036a84bd1e935c7285 453 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 261 279 5.8E-7 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 BUMPUSDA_RS03100 75acb688a08674036a84bd1e935c7285 453 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 191 211 5.8E-7 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 BUMPUSDA_RS03100 75acb688a08674036a84bd1e935c7285 453 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 444 3.5E-156 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 BUMPUSDA_RS03100 75acb688a08674036a84bd1e935c7285 453 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 188 351 8.9E-26 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 BUMPUSDA_RS03100 75acb688a08674036a84bd1e935c7285 453 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 159 2.5E-27 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 BUMPUSDA_RS00400 d17d8fcb47142c78abab16819dff5a52 247 PANTHER PTHR37533:SF2 115 201 6.4E-16 T 23-04-2016 BUMPUSDA_RS00400 d17d8fcb47142c78abab16819dff5a52 247 PRINTS PR01007 Flagellar hook-length control protein signature 115 137 1.2E-10 T 23-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 BUMPUSDA_RS00400 d17d8fcb47142c78abab16819dff5a52 247 PRINTS PR01007 Flagellar hook-length control protein signature 140 158 1.2E-10 T 23-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 BUMPUSDA_RS00400 d17d8fcb47142c78abab16819dff5a52 247 PRINTS PR01007 Flagellar hook-length control protein signature 158 173 1.2E-10 T 23-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 BUMPUSDA_RS00400 d17d8fcb47142c78abab16819dff5a52 247 PRINTS PR01007 Flagellar hook-length control protein signature 173 196 1.2E-10 T 23-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 BUMPUSDA_RS00400 d17d8fcb47142c78abab16819dff5a52 247 Pfam PF02120 Flagellar hook-length control protein FliK 129 202 3.4E-13 T 23-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal BUMPUSDA_RS00400 d17d8fcb47142c78abab16819dff5a52 247 PANTHER PTHR37533 115 201 6.4E-16 T 23-04-2016 BUMPUSDA_RS00800 8f78d84fd1317219953007cf5134f186 911 Pfam PF00384 Molybdopterin oxidoreductase 560 644 8.5E-6 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 BUMPUSDA_RS00800 8f78d84fd1317219953007cf5134f186 911 SUPERFAMILY SSF54292 1 77 8.13E-18 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 BUMPUSDA_RS00800 8f78d84fd1317219953007cf5134f186 911 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 23-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 BUMPUSDA_RS00800 8f78d84fd1317219953007cf5134f186 911 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 4 80 1.8E-9 T 23-04-2016 BUMPUSDA_RS00800 8f78d84fd1317219953007cf5134f186 911 Gene3D G3DSA:3.30.70.20 146 157 6.1E-4 T 23-04-2016 BUMPUSDA_RS00800 8f78d84fd1317219953007cf5134f186 911 Gene3D G3DSA:3.30.70.20 198 227 6.1E-4 T 23-04-2016 BUMPUSDA_RS00800 8f78d84fd1317219953007cf5134f186 911 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 657 7.8E-210 T 23-04-2016 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 BUMPUSDA_RS00800 8f78d84fd1317219953007cf5134f186 911 SUPERFAMILY SSF53706 219 687 6.07E-64 T 23-04-2016 BUMPUSDA_RS00800 8f78d84fd1317219953007cf5134f186 911 SMART SM00926 221 275 2.2E-6 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 BUMPUSDA_RS00800 8f78d84fd1317219953007cf5134f186 911 SMART SM00929 88 128 9.1E-18 T 23-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 BUMPUSDA_RS00800 8f78d84fd1317219953007cf5134f186 911 SUPERFAMILY SSF54862 87 211 6.28E-30 T 23-04-2016 BUMPUSDA_RS00800 8f78d84fd1317219953007cf5134f186 911 Gene3D G3DSA:3.40.50.740 311 341 5.7E-21 T 23-04-2016 BUMPUSDA_RS00800 8f78d84fd1317219953007cf5134f186 911 Gene3D G3DSA:3.40.50.740 505 693 5.7E-21 T 23-04-2016 BUMPUSDA_RS00800 8f78d84fd1317219953007cf5134f186 911 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 103 115 - T 23-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 BUMPUSDA_RS00800 8f78d84fd1317219953007cf5134f186 911 PANTHER PTHR11615:SF134 3 321 6.4E-280 T 23-04-2016 BUMPUSDA_RS00800 8f78d84fd1317219953007cf5134f186 911 PANTHER PTHR11615:SF134 365 431 6.4E-280 T 23-04-2016 BUMPUSDA_RS00800 8f78d84fd1317219953007cf5134f186 911 PANTHER PTHR11615:SF134 739 910 6.4E-280 T 23-04-2016 BUMPUSDA_RS00800 8f78d84fd1317219953007cf5134f186 911 PANTHER PTHR11615:SF134 497 683 6.4E-280 T 23-04-2016 BUMPUSDA_RS00800 8f78d84fd1317219953007cf5134f186 911 Gene3D G3DSA:2.20.25.90 228 271 2.3E-10 T 23-04-2016 BUMPUSDA_RS00800 8f78d84fd1317219953007cf5134f186 911 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 88 126 2.4E-14 T 23-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 BUMPUSDA_RS00800 8f78d84fd1317219953007cf5134f186 911 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 150 160 - T 23-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 BUMPUSDA_RS00800 8f78d84fd1317219953007cf5134f186 911 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 221 271 1.3E-8 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 BUMPUSDA_RS00800 8f78d84fd1317219953007cf5134f186 911 PANTHER PTHR11615 3 321 6.4E-280 T 23-04-2016 BUMPUSDA_RS00800 8f78d84fd1317219953007cf5134f186 911 PANTHER PTHR11615 365 431 6.4E-280 T 23-04-2016 BUMPUSDA_RS00800 8f78d84fd1317219953007cf5134f186 911 PANTHER PTHR11615 739 910 6.4E-280 T 23-04-2016 BUMPUSDA_RS00800 8f78d84fd1317219953007cf5134f186 911 PANTHER PTHR11615 497 683 6.4E-280 T 23-04-2016 BUMPUSDA_RS00800 8f78d84fd1317219953007cf5134f186 911 Gene3D G3DSA:3.10.20.30 8 51 5.0E-5 T 23-04-2016 IPR012675 Beta-grasp domain BUMPUSDA_RS02005 4577e8e9fcd3ac04484cc5a1680d2842 253 PANTHER PTHR32125:SF1 10 236 6.1E-104 T 23-04-2016 BUMPUSDA_RS02005 4577e8e9fcd3ac04484cc5a1680d2842 253 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 253 100.357 T 23-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 BUMPUSDA_RS02005 4577e8e9fcd3ac04484cc5a1680d2842 253 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 32 229 7.6E-63 T 23-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 BUMPUSDA_RS02005 4577e8e9fcd3ac04484cc5a1680d2842 253 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 10 240 4.1E-97 T 23-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 BUMPUSDA_RS02005 4577e8e9fcd3ac04484cc5a1680d2842 253 PIRSF PIRSF000386 10 253 6.3E-96 T 23-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 BUMPUSDA_RS02005 4577e8e9fcd3ac04484cc5a1680d2842 253 Gene3D G3DSA:3.40.1280.10 10 168 9.5E-64 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BUMPUSDA_RS02005 4577e8e9fcd3ac04484cc5a1680d2842 253 PANTHER PTHR32125 10 236 6.1E-104 T 23-04-2016 BUMPUSDA_RS02005 4577e8e9fcd3ac04484cc5a1680d2842 253 Gene3D G3DSA:1.10.1270.20 170 252 2.2E-31 T 23-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 BUMPUSDA_RS02005 4577e8e9fcd3ac04484cc5a1680d2842 253 SUPERFAMILY SSF75217 10 251 3.4E-96 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases BUMPUSDA_RS02880 4d58a2a5665cc4f9458951c559a64270 724 SUPERFAMILY SSF50249 221 640 3.88E-122 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS02880 4d58a2a5665cc4f9458951c559a64270 724 PANTHER PTHR23355:SF9 4 724 3.2E-208 T 23-04-2016 BUMPUSDA_RS02880 4d58a2a5665cc4f9458951c559a64270 724 ProSitePatterns PS01175 Ribonuclease II family signature. 556 580 - T 23-04-2016 IPR022966 Ribonuclease II/R, conserved site BUMPUSDA_RS02880 4d58a2a5665cc4f9458951c559a64270 724 Hamap MF_01895 Ribonuclease R [rnr]. 38 724 52.291 T 23-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 BUMPUSDA_RS02880 4d58a2a5665cc4f9458951c559a64270 724 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 73 724 2.7E-209 T 23-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 BUMPUSDA_RS02880 4d58a2a5665cc4f9458951c559a64270 724 SUPERFAMILY SSF50249 67 146 5.82E-14 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS02880 4d58a2a5665cc4f9458951c559a64270 724 SMART SM00955 259 589 3.3E-148 T 23-04-2016 BUMPUSDA_RS02880 4d58a2a5665cc4f9458951c559a64270 724 SMART SM00357 86 145 3.5E-7 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 BUMPUSDA_RS02880 4d58a2a5665cc4f9458951c559a64270 724 TIGRFAM TIGR02063 RNase_R: ribonuclease R 19 724 1.1E-259 T 23-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 BUMPUSDA_RS02880 4d58a2a5665cc4f9458951c559a64270 724 SUPERFAMILY SSF50249 643 723 6.71E-20 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS02880 4d58a2a5665cc4f9458951c559a64270 724 Pfam PF08206 Ribonuclease B OB domain 87 144 5.9E-17 T 23-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain BUMPUSDA_RS02880 4d58a2a5665cc4f9458951c559a64270 724 Pfam PF00773 RNB domain 259 588 4.1E-95 T 23-04-2016 BUMPUSDA_RS02880 4d58a2a5665cc4f9458951c559a64270 724 Pfam PF00575 S1 RNA binding domain 641 723 3.6E-11 T 23-04-2016 IPR003029 S1 domain GO:0003676 BUMPUSDA_RS02880 4d58a2a5665cc4f9458951c559a64270 724 SMART SM00316 641 724 2.6E-14 T 23-04-2016 IPR022967 RNA-binding domain, S1 BUMPUSDA_RS02880 4d58a2a5665cc4f9458951c559a64270 724 Gene3D G3DSA:2.40.50.140 643 723 6.0E-18 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS02880 4d58a2a5665cc4f9458951c559a64270 724 PANTHER PTHR23355 4 724 3.2E-208 T 23-04-2016 BUMPUSDA_RS02880 4d58a2a5665cc4f9458951c559a64270 724 SUPERFAMILY SSF50249 141 234 1.59E-9 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS01895 3c354928d027ef03329eebdd48b9ed0a 707 Pfam PF01138 3' exoribonuclease family, domain 1 16 144 2.5E-18 T 23-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 BUMPUSDA_RS01895 3c354928d027ef03329eebdd48b9ed0a 707 Pfam PF01138 3' exoribonuclease family, domain 1 324 456 3.9E-23 T 23-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 BUMPUSDA_RS01895 3c354928d027ef03329eebdd48b9ed0a 707 SUPERFAMILY SSF54211 4 144 4.3E-49 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold BUMPUSDA_RS01895 3c354928d027ef03329eebdd48b9ed0a 707 SUPERFAMILY SSF54791 554 622 8.85E-16 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 BUMPUSDA_RS01895 3c354928d027ef03329eebdd48b9ed0a 707 PANTHER PTHR11252 2 693 0.0 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 BUMPUSDA_RS01895 3c354928d027ef03329eebdd48b9ed0a 707 Gene3D G3DSA:2.40.50.140 619 693 4.3E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS01895 3c354928d027ef03329eebdd48b9ed0a 707 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 693 29.74 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 BUMPUSDA_RS01895 3c354928d027ef03329eebdd48b9ed0a 707 SUPERFAMILY SSF55666 145 233 5.75E-26 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 BUMPUSDA_RS01895 3c354928d027ef03329eebdd48b9ed0a 707 SUPERFAMILY SSF50249 608 692 6.34E-22 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS01895 3c354928d027ef03329eebdd48b9ed0a 707 SUPERFAMILY SSF46915 239 320 2.17E-17 T 23-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 BUMPUSDA_RS01895 3c354928d027ef03329eebdd48b9ed0a 707 Pfam PF00575 S1 RNA binding domain 619 690 1.6E-19 T 23-04-2016 IPR003029 S1 domain GO:0003676 BUMPUSDA_RS01895 3c354928d027ef03329eebdd48b9ed0a 707 PIRSF PIRSF005499 2 705 1.2E-289 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 BUMPUSDA_RS01895 3c354928d027ef03329eebdd48b9ed0a 707 Gene3D G3DSA:3.30.230.70 4 224 1.8E-78 T 23-04-2016 IPR027408 PNPase/RNase PH domain BUMPUSDA_RS01895 3c354928d027ef03329eebdd48b9ed0a 707 Gene3D G3DSA:3.30.230.70 314 543 1.1E-87 T 23-04-2016 IPR027408 PNPase/RNase PH domain BUMPUSDA_RS01895 3c354928d027ef03329eebdd48b9ed0a 707 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 691 0.0 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 BUMPUSDA_RS01895 3c354928d027ef03329eebdd48b9ed0a 707 Pfam PF00013 KH domain 556 614 5.0E-8 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 BUMPUSDA_RS01895 3c354928d027ef03329eebdd48b9ed0a 707 SMART SM00322 552 617 1.8E-11 T 23-04-2016 IPR004087 K Homology domain GO:0003676 BUMPUSDA_RS01895 3c354928d027ef03329eebdd48b9ed0a 707 SUPERFAMILY SSF54211 296 468 4.56E-48 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold BUMPUSDA_RS01895 3c354928d027ef03329eebdd48b9ed0a 707 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 320 1.0E-21 T 23-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 BUMPUSDA_RS01895 3c354928d027ef03329eebdd48b9ed0a 707 Gene3D G3DSA:1.10.10.400 234 313 3.4E-21 T 23-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 BUMPUSDA_RS01895 3c354928d027ef03329eebdd48b9ed0a 707 SMART SM00316 620 690 6.1E-26 T 23-04-2016 IPR022967 RNA-binding domain, S1 BUMPUSDA_RS01895 3c354928d027ef03329eebdd48b9ed0a 707 Gene3D G3DSA:3.30.1370.10 552 618 1.2E-23 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 BUMPUSDA_RS01895 3c354928d027ef03329eebdd48b9ed0a 707 SUPERFAMILY SSF55666 453 560 2.14E-25 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 BUMPUSDA_RS01895 3c354928d027ef03329eebdd48b9ed0a 707 Pfam PF03725 3' exoribonuclease family, domain 2 147 210 2.9E-15 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 BUMPUSDA_RS00980 3f0dda8a8bd435b021e61dec1420450a 814 PIRSF PIRSF000727 1 814 0.0 T 23-04-2016 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00050|UniPathway: UPA00051|UniPathway: UPA00051 BUMPUSDA_RS00980 3f0dda8a8bd435b021e61dec1420450a 814 Gene3D G3DSA:3.40.1160.10 110 299 6.0E-60 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 BUMPUSDA_RS00980 3f0dda8a8bd435b021e61dec1420450a 814 Gene3D G3DSA:3.40.1160.10 2 49 6.0E-60 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 BUMPUSDA_RS00980 3f0dda8a8bd435b021e61dec1420450a 814 SUPERFAMILY SSF55021 302 380 3.96E-16 T 23-04-2016 BUMPUSDA_RS00980 3f0dda8a8bd435b021e61dec1420450a 814 Pfam PF00696 Amino acid kinase family 3 283 1.8E-42 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 BUMPUSDA_RS00980 3f0dda8a8bd435b021e61dec1420450a 814 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 4 459 3.4E-126 T 23-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 BUMPUSDA_RS00980 3f0dda8a8bd435b021e61dec1420450a 814 PANTHER PTHR21499 1 470 1.3E-118 T 23-04-2016 BUMPUSDA_RS00980 3f0dda8a8bd435b021e61dec1420450a 814 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 471 605 3.1E-21 T 23-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 BUMPUSDA_RS00980 3f0dda8a8bd435b021e61dec1420450a 814 SUPERFAMILY SSF53633 1 296 1.48E-70 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 BUMPUSDA_RS00980 3f0dda8a8bd435b021e61dec1420450a 814 Pfam PF00742 Homoserine dehydrogenase 613 810 1.9E-48 T 23-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 BUMPUSDA_RS00980 3f0dda8a8bd435b021e61dec1420450a 814 PANTHER PTHR21499:SF1 1 470 1.3E-118 T 23-04-2016 BUMPUSDA_RS00980 3f0dda8a8bd435b021e61dec1420450a 814 SUPERFAMILY SSF55347 613 797 2.55E-51 T 23-04-2016 BUMPUSDA_RS00980 3f0dda8a8bd435b021e61dec1420450a 814 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 23-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 BUMPUSDA_RS00980 3f0dda8a8bd435b021e61dec1420450a 814 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 659 681 - T 23-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 BUMPUSDA_RS00980 3f0dda8a8bd435b021e61dec1420450a 814 SUPERFAMILY SSF55021 381 469 4.58E-18 T 23-04-2016 BUMPUSDA_RS00980 3f0dda8a8bd435b021e61dec1420450a 814 Gene3D G3DSA:3.40.50.720 463 634 5.7E-57 T 23-04-2016 IPR016040 NAD(P)-binding domain BUMPUSDA_RS00980 3f0dda8a8bd435b021e61dec1420450a 814 Gene3D G3DSA:3.30.360.10 635 791 1.2E-52 T 23-04-2016 BUMPUSDA_RS00980 3f0dda8a8bd435b021e61dec1420450a 814 SUPERFAMILY SSF51735 462 635 8.86E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain BUMPUSDA_RS02740 3880fa77d3972a96eb360fe8b7acb801 360 Pfam PF01761 3-dehydroquinate synthase 67 325 8.1E-106 T 23-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 BUMPUSDA_RS02740 3880fa77d3972a96eb360fe8b7acb801 360 PANTHER PTHR21090 2 357 3.1E-170 T 23-04-2016 BUMPUSDA_RS02740 3880fa77d3972a96eb360fe8b7acb801 360 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 358 41.036 T 23-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 BUMPUSDA_RS02740 3880fa77d3972a96eb360fe8b7acb801 360 Gene3D G3DSA:1.20.1090.10 173 356 3.4E-60 T 23-04-2016 BUMPUSDA_RS02740 3880fa77d3972a96eb360fe8b7acb801 360 SUPERFAMILY SSF56796 4 357 3.53E-110 T 23-04-2016 BUMPUSDA_RS02740 3880fa77d3972a96eb360fe8b7acb801 360 Gene3D G3DSA:3.40.50.1970 3 172 1.8E-61 T 23-04-2016 BUMPUSDA_RS02740 3880fa77d3972a96eb360fe8b7acb801 360 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 352 1.0E-113 T 23-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 BUMPUSDA_RS02740 3880fa77d3972a96eb360fe8b7acb801 360 PIRSF PIRSF001455 8 360 9.3E-105 T 23-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 BUMPUSDA_RS02980 6843a0b0c87183d2ba5c92d3419995ce 165 Pfam PF01467 Cytidylyltransferase-like 6 135 4.0E-17 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BUMPUSDA_RS02980 6843a0b0c87183d2ba5c92d3419995ce 165 PANTHER PTHR21342 1 165 6.3E-65 T 23-04-2016 BUMPUSDA_RS02980 6843a0b0c87183d2ba5c92d3419995ce 165 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 160 34.149 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 BUMPUSDA_RS02980 6843a0b0c87183d2ba5c92d3419995ce 165 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 158 2.2E-53 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 BUMPUSDA_RS02980 6843a0b0c87183d2ba5c92d3419995ce 165 SUPERFAMILY SSF52374 3 159 3.75E-37 T 23-04-2016 BUMPUSDA_RS02980 6843a0b0c87183d2ba5c92d3419995ce 165 Gene3D G3DSA:3.40.50.620 1 158 1.6E-44 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BUMPUSDA_RS02980 6843a0b0c87183d2ba5c92d3419995ce 165 PANTHER PTHR21342:SF1 1 165 6.3E-65 T 23-04-2016 BUMPUSDA_RS02980 6843a0b0c87183d2ba5c92d3419995ce 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 1.3E-40 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 BUMPUSDA_RS02980 6843a0b0c87183d2ba5c92d3419995ce 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 87 103 1.3E-40 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 BUMPUSDA_RS02980 6843a0b0c87183d2ba5c92d3419995ce 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 1.3E-40 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 BUMPUSDA_RS02980 6843a0b0c87183d2ba5c92d3419995ce 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 1.3E-40 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 BUMPUSDA_RS02980 6843a0b0c87183d2ba5c92d3419995ce 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 114 136 1.3E-40 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 BUMPUSDA_RS02980 6843a0b0c87183d2ba5c92d3419995ce 165 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 63 2.2E-17 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BUMPUSDA_RS00050 f498ffef3ceb910a9f36fc9637711025 803 Pfam PF01751 Toprim domain 419 531 5.3E-18 T 23-04-2016 IPR006171 Toprim domain BUMPUSDA_RS00050 f498ffef3ceb910a9f36fc9637711025 803 SUPERFAMILY SSF56719 394 560 1.44E-80 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 BUMPUSDA_RS00050 f498ffef3ceb910a9f36fc9637711025 803 SUPERFAMILY SSF56719 729 794 1.44E-80 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 BUMPUSDA_RS00050 f498ffef3ceb910a9f36fc9637711025 803 SUPERFAMILY SSF55874 7 217 1.44E-69 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain BUMPUSDA_RS00050 f498ffef3ceb910a9f36fc9637711025 803 Gene3D G3DSA:3.30.230.10 220 391 8.6E-68 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BUMPUSDA_RS00050 f498ffef3ceb910a9f36fc9637711025 803 SUPERFAMILY SSF54211 221 391 2.85E-54 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold BUMPUSDA_RS00050 f498ffef3ceb910a9f36fc9637711025 803 Gene3D G3DSA:3.40.50.670 717 785 2.1E-95 T 23-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 BUMPUSDA_RS00050 f498ffef3ceb910a9f36fc9637711025 803 Gene3D G3DSA:3.40.50.670 404 550 2.1E-95 T 23-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 BUMPUSDA_RS00050 f498ffef3ceb910a9f36fc9637711025 803 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 172 1.3E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain BUMPUSDA_RS00050 f498ffef3ceb910a9f36fc9637711025 803 ProSitePatterns PS00177 DNA topoisomerase II signature. 422 430 - T 23-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 BUMPUSDA_RS00050 f498ffef3ceb910a9f36fc9637711025 803 Pfam PF00204 DNA gyrase B 221 390 5.4E-56 T 23-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 BUMPUSDA_RS00050 f498ffef3ceb910a9f36fc9637711025 803 PRINTS PR00418 DNA topoisomerase II family signature 505 522 9.6E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 BUMPUSDA_RS00050 f498ffef3ceb910a9f36fc9637711025 803 PRINTS PR00418 DNA topoisomerase II family signature 268 281 9.6E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 BUMPUSDA_RS00050 f498ffef3ceb910a9f36fc9637711025 803 PRINTS PR00418 DNA topoisomerase II family signature 70 83 9.6E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 BUMPUSDA_RS00050 f498ffef3ceb910a9f36fc9637711025 803 PRINTS PR00418 DNA topoisomerase II family signature 487 503 9.6E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 BUMPUSDA_RS00050 f498ffef3ceb910a9f36fc9637711025 803 PRINTS PR00418 DNA topoisomerase II family signature 735 751 9.6E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 BUMPUSDA_RS00050 f498ffef3ceb910a9f36fc9637711025 803 PRINTS PR00418 DNA topoisomerase II family signature 420 434 9.6E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 BUMPUSDA_RS00050 f498ffef3ceb910a9f36fc9637711025 803 PRINTS PR00418 DNA topoisomerase II family signature 35 50 9.6E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 BUMPUSDA_RS00050 f498ffef3ceb910a9f36fc9637711025 803 PRINTS PR00418 DNA topoisomerase II family signature 113 127 9.6E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 BUMPUSDA_RS00050 f498ffef3ceb910a9f36fc9637711025 803 PRINTS PR00418 DNA topoisomerase II family signature 525 537 9.6E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 BUMPUSDA_RS00050 f498ffef3ceb910a9f36fc9637711025 803 PRINTS PR01159 DNA gyrase subunit B signature 5 15 1.3E-68 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BUMPUSDA_RS00050 f498ffef3ceb910a9f36fc9637711025 803 PRINTS PR01159 DNA gyrase subunit B signature 220 242 1.3E-68 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BUMPUSDA_RS00050 f498ffef3ceb910a9f36fc9637711025 803 PRINTS PR01159 DNA gyrase subunit B signature 374 394 1.3E-68 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BUMPUSDA_RS00050 f498ffef3ceb910a9f36fc9637711025 803 PRINTS PR01159 DNA gyrase subunit B signature 312 328 1.3E-68 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BUMPUSDA_RS00050 f498ffef3ceb910a9f36fc9637711025 803 PRINTS PR01159 DNA gyrase subunit B signature 181 196 1.3E-68 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BUMPUSDA_RS00050 f498ffef3ceb910a9f36fc9637711025 803 PRINTS PR01159 DNA gyrase subunit B signature 772 788 1.3E-68 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BUMPUSDA_RS00050 f498ffef3ceb910a9f36fc9637711025 803 PRINTS PR01159 DNA gyrase subunit B signature 470 479 1.3E-68 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BUMPUSDA_RS00050 f498ffef3ceb910a9f36fc9637711025 803 PRINTS PR01159 DNA gyrase subunit B signature 196 209 1.3E-68 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BUMPUSDA_RS00050 f498ffef3ceb910a9f36fc9637711025 803 PRINTS PR01159 DNA gyrase subunit B signature 360 374 1.3E-68 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BUMPUSDA_RS00050 f498ffef3ceb910a9f36fc9637711025 803 PRINTS PR01159 DNA gyrase subunit B signature 756 768 1.3E-68 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BUMPUSDA_RS00050 f498ffef3ceb910a9f36fc9637711025 803 SMART SM00387 31 175 8.0E-28 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain BUMPUSDA_RS00050 f498ffef3ceb910a9f36fc9637711025 803 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 803 2.1E-288 T 23-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BUMPUSDA_RS00050 f498ffef3ceb910a9f36fc9637711025 803 PANTHER PTHR10169 723 803 8.3E-280 T 23-04-2016 BUMPUSDA_RS00050 f498ffef3ceb910a9f36fc9637711025 803 PANTHER PTHR10169 1 553 8.3E-280 T 23-04-2016 BUMPUSDA_RS00050 f498ffef3ceb910a9f36fc9637711025 803 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 733 792 2.9E-29 T 23-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 BUMPUSDA_RS00050 f498ffef3ceb910a9f36fc9637711025 803 Gene3D G3DSA:3.30.565.10 15 217 4.0E-88 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain BUMPUSDA_RS00050 f498ffef3ceb910a9f36fc9637711025 803 SMART SM00433 35 796 7.0E-242 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 BUMPUSDA_RS00050 f498ffef3ceb910a9f36fc9637711025 803 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 803 93.443 T 23-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BUMPUSDA_RS00845 c2fec15ddcba4f3be8abe6891b820b6f 426 Pfam PF08245 Mur ligase middle domain 48 222 9.0E-10 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 BUMPUSDA_RS00845 c2fec15ddcba4f3be8abe6891b820b6f 426 PIRSF PIRSF001563 1 415 8.6E-103 T 23-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 BUMPUSDA_RS00845 c2fec15ddcba4f3be8abe6891b820b6f 426 PANTHER PTHR11136 3 420 5.2E-95 T 23-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 BUMPUSDA_RS00845 c2fec15ddcba4f3be8abe6891b820b6f 426 SUPERFAMILY SSF53623 8 276 3.66E-74 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 BUMPUSDA_RS00845 c2fec15ddcba4f3be8abe6891b820b6f 426 PANTHER PTHR11136:SF0 3 420 5.2E-95 T 23-04-2016 BUMPUSDA_RS00845 c2fec15ddcba4f3be8abe6891b820b6f 426 TIGRFAM TIGR01499 folC: bifunctional protein FolC 28 408 8.4E-94 T 23-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 BUMPUSDA_RS00845 c2fec15ddcba4f3be8abe6891b820b6f 426 Gene3D G3DSA:3.40.1190.10 11 276 2.0E-67 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 BUMPUSDA_RS00845 c2fec15ddcba4f3be8abe6891b820b6f 426 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 138 153 - T 23-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 BUMPUSDA_RS00845 c2fec15ddcba4f3be8abe6891b820b6f 426 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 46 69 - T 23-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 BUMPUSDA_RS00845 c2fec15ddcba4f3be8abe6891b820b6f 426 SUPERFAMILY SSF53244 282 409 5.13E-25 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 BUMPUSDA_RS00845 c2fec15ddcba4f3be8abe6891b820b6f 426 Gene3D G3DSA:3.90.190.20 282 409 4.3E-33 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 BUMPUSDA_RS02910 bb7bf2724b4f11bacdd42c6b4b42ddc0 386 SUPERFAMILY SSF51735 1 199 1.69E-28 T 23-04-2016 IPR016040 NAD(P)-binding domain BUMPUSDA_RS02910 bb7bf2724b4f11bacdd42c6b4b42ddc0 386 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 1 123 5.8E-17 T 23-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 BUMPUSDA_RS02910 bb7bf2724b4f11bacdd42c6b4b42ddc0 386 Gene3D G3DSA:3.40.50.720 79 199 4.0E-13 T 23-04-2016 IPR016040 NAD(P)-binding domain BUMPUSDA_RS02910 bb7bf2724b4f11bacdd42c6b4b42ddc0 386 Gene3D G3DSA:3.40.50.720 2 78 1.2E-4 T 23-04-2016 IPR016040 NAD(P)-binding domain BUMPUSDA_RS02910 bb7bf2724b4f11bacdd42c6b4b42ddc0 386 PANTHER PTHR30524:SF0 1 381 3.2E-135 T 23-04-2016 BUMPUSDA_RS02910 bb7bf2724b4f11bacdd42c6b4b42ddc0 386 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 151 371 1.9E-46 T 23-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 BUMPUSDA_RS02910 bb7bf2724b4f11bacdd42c6b4b42ddc0 386 PANTHER PTHR30524 1 381 3.2E-135 T 23-04-2016 BUMPUSDA_RS02910 bb7bf2724b4f11bacdd42c6b4b42ddc0 386 PRINTS PR00084 Mannitol dehydrogenase signature 115 128 1.3E-11 T 23-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 BUMPUSDA_RS02910 bb7bf2724b4f11bacdd42c6b4b42ddc0 386 PRINTS PR00084 Mannitol dehydrogenase signature 170 185 1.3E-11 T 23-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 BUMPUSDA_RS02910 bb7bf2724b4f11bacdd42c6b4b42ddc0 386 PRINTS PR00084 Mannitol dehydrogenase signature 151 164 1.3E-11 T 23-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 BUMPUSDA_RS02910 bb7bf2724b4f11bacdd42c6b4b42ddc0 386 PRINTS PR00084 Mannitol dehydrogenase signature 3 13 1.3E-11 T 23-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 BUMPUSDA_RS02910 bb7bf2724b4f11bacdd42c6b4b42ddc0 386 Gene3D G3DSA:1.10.1040.10 204 378 1.6E-40 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BUMPUSDA_RS02910 bb7bf2724b4f11bacdd42c6b4b42ddc0 386 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 1 378 38.263 T 23-04-2016 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 BUMPUSDA_RS02910 bb7bf2724b4f11bacdd42c6b4b42ddc0 386 SUPERFAMILY SSF48179 204 382 4.76E-41 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 BUMPUSDA_RS01930 253dac5b83cc3cf1abede8c35c3c857e 444 Gene3D G3DSA:3.40.120.10 177 250 1.0E-22 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BUMPUSDA_RS01930 253dac5b83cc3cf1abede8c35c3c857e 444 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 136 9.2E-39 T 23-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BUMPUSDA_RS01930 253dac5b83cc3cf1abede8c35c3c857e 444 SUPERFAMILY SSF53738 157 255 4.32E-25 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BUMPUSDA_RS01930 253dac5b83cc3cf1abede8c35c3c857e 444 Gene3D G3DSA:3.40.120.10 251 367 2.5E-28 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BUMPUSDA_RS01930 253dac5b83cc3cf1abede8c35c3c857e 444 PANTHER PTHR22573:SF15 1 442 3.6E-129 T 23-04-2016 BUMPUSDA_RS01930 253dac5b83cc3cf1abede8c35c3c857e 444 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 397 441 7.2E-7 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BUMPUSDA_RS01930 253dac5b83cc3cf1abede8c35c3c857e 444 Gene3D G3DSA:3.30.310.50 369 442 7.9E-10 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BUMPUSDA_RS01930 253dac5b83cc3cf1abede8c35c3c857e 444 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 365 8.6E-28 T 23-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BUMPUSDA_RS01930 253dac5b83cc3cf1abede8c35c3c857e 444 SUPERFAMILY SSF53738 258 365 4.71E-27 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BUMPUSDA_RS01930 253dac5b83cc3cf1abede8c35c3c857e 444 PANTHER PTHR22573 1 442 3.6E-129 T 23-04-2016 BUMPUSDA_RS01930 253dac5b83cc3cf1abede8c35c3c857e 444 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 5.0E-16 T 23-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BUMPUSDA_RS01930 253dac5b83cc3cf1abede8c35c3c857e 444 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 442 4.1E-155 T 23-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BUMPUSDA_RS01930 253dac5b83cc3cf1abede8c35c3c857e 444 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 1.2E-6 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BUMPUSDA_RS01930 253dac5b83cc3cf1abede8c35c3c857e 444 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 1.2E-6 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BUMPUSDA_RS01930 253dac5b83cc3cf1abede8c35c3c857e 444 SUPERFAMILY SSF53738 3 181 5.89E-40 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BUMPUSDA_RS01930 253dac5b83cc3cf1abede8c35c3c857e 444 Gene3D G3DSA:3.40.120.10 6 138 7.9E-38 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BUMPUSDA_RS01930 253dac5b83cc3cf1abede8c35c3c857e 444 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 444 39.89 T 23-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BUMPUSDA_RS01930 253dac5b83cc3cf1abede8c35c3c857e 444 SUPERFAMILY SSF55957 357 442 8.24E-15 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BUMPUSDA_RS00410 07f2b60e056001369b820bfe943a2112 118 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 37 111 7.9E-28 T 23-04-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 BUMPUSDA_RS00410 07f2b60e056001369b820bfe943a2112 118 Gene3D G3DSA:2.30.330.10 30 110 1.2E-24 T 23-04-2016 BUMPUSDA_RS00410 07f2b60e056001369b820bfe943a2112 118 PANTHER PTHR30034 29 118 3.0E-14 T 23-04-2016 BUMPUSDA_RS00410 07f2b60e056001369b820bfe943a2112 118 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 40 108 1.5E-18 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) BUMPUSDA_RS00410 07f2b60e056001369b820bfe943a2112 118 PRINTS PR00956 Flagellar motor switch protein FliN signature 85 100 8.8E-20 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 BUMPUSDA_RS00410 07f2b60e056001369b820bfe943a2112 118 PRINTS PR00956 Flagellar motor switch protein FliN signature 56 72 8.8E-20 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 BUMPUSDA_RS00410 07f2b60e056001369b820bfe943a2112 118 PRINTS PR00956 Flagellar motor switch protein FliN signature 72 85 8.8E-20 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 BUMPUSDA_RS00410 07f2b60e056001369b820bfe943a2112 118 PRINTS PR00956 Flagellar motor switch protein FliN signature 39 55 8.8E-20 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 BUMPUSDA_RS00410 07f2b60e056001369b820bfe943a2112 118 SUPERFAMILY SSF101801 37 112 1.7E-19 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) BUMPUSDA_RS00410 07f2b60e056001369b820bfe943a2112 118 PANTHER PTHR30034:SF1 29 118 3.0E-14 T 23-04-2016 BUMPUSDA_RS00690 a4e6e88487b0845fac7742dfa585e3a5 280 SUPERFAMILY SSF51658 1 278 4.19E-88 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain BUMPUSDA_RS00690 a4e6e88487b0845fac7742dfa585e3a5 280 Gene3D G3DSA:3.20.20.150 1 277 2.5E-105 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain BUMPUSDA_RS00690 a4e6e88487b0845fac7742dfa585e3a5 280 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 215 231 - T 23-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 BUMPUSDA_RS00690 a4e6e88487b0845fac7742dfa585e3a5 280 PANTHER PTHR21445 1 277 1.2E-137 T 23-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 BUMPUSDA_RS00690 a4e6e88487b0845fac7742dfa585e3a5 280 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 279 42.72 T 23-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 BUMPUSDA_RS00690 a4e6e88487b0845fac7742dfa585e3a5 280 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 2 276 2.5E-100 T 23-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 BUMPUSDA_RS00690 a4e6e88487b0845fac7742dfa585e3a5 280 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 69 77 - T 23-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 BUMPUSDA_RS00690 a4e6e88487b0845fac7742dfa585e3a5 280 Pfam PF01261 Xylose isomerase-like TIM barrel 27 239 1.7E-31 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain BUMPUSDA_RS00690 a4e6e88487b0845fac7742dfa585e3a5 280 SMART SM00518 3 279 3.5E-108 T 23-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 BUMPUSDA_RS00690 a4e6e88487b0845fac7742dfa585e3a5 280 PANTHER PTHR21445:SF0 1 277 1.2E-137 T 23-04-2016 BUMPUSDA_RS00690 a4e6e88487b0845fac7742dfa585e3a5 280 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 175 182 - T 23-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 BUMPUSDA_RS00465 5bca387827d5699082064d0ccf9c33aa 316 Pfam PF00923 Transaldolase 13 310 3.0E-89 T 23-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 BUMPUSDA_RS00465 5bca387827d5699082064d0ccf9c33aa 316 TIGRFAM TIGR00874 talAB: transaldolase 2 316 2.4E-134 T 23-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 BUMPUSDA_RS00465 5bca387827d5699082064d0ccf9c33aa 316 SUPERFAMILY SSF51569 1 315 1.36E-100 T 23-04-2016 BUMPUSDA_RS00465 5bca387827d5699082064d0ccf9c33aa 316 Gene3D G3DSA:3.20.20.70 1 315 5.9E-114 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 BUMPUSDA_RS00465 5bca387827d5699082064d0ccf9c33aa 316 Hamap MF_00492 Transaldolase [tal]. 1 316 49.011 T 23-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 BUMPUSDA_RS00465 5bca387827d5699082064d0ccf9c33aa 316 PANTHER PTHR10683:SF18 1 316 5.4E-153 T 23-04-2016 BUMPUSDA_RS00465 5bca387827d5699082064d0ccf9c33aa 316 ProSitePatterns PS01054 Transaldolase signature 1. 30 38 - T 23-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 BUMPUSDA_RS00465 5bca387827d5699082064d0ccf9c33aa 316 PANTHER PTHR10683 1 316 5.4E-153 T 23-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 BUMPUSDA_RS00465 5bca387827d5699082064d0ccf9c33aa 316 ProSitePatterns PS00958 Transaldolase active site. 128 145 - T 23-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 BUMPUSDA_RS02425 389a72b0b409075960a425c9abed8d63 782 PIRSF PIRSF001174 1 775 0.0 T 23-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 BUMPUSDA_RS02425 389a72b0b409075960a425c9abed8d63 782 TIGRFAM TIGR00763 lon: endopeptidase La 12 771 3.0E-301 T 23-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 BUMPUSDA_RS02425 389a72b0b409075960a425c9abed8d63 782 Gene3D G3DSA:3.30.230.10 590 771 9.2E-76 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BUMPUSDA_RS02425 389a72b0b409075960a425c9abed8d63 782 SMART SM00382 348 492 9.9E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain BUMPUSDA_RS02425 389a72b0b409075960a425c9abed8d63 782 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 595 611 6.3E-54 T 23-04-2016 BUMPUSDA_RS02425 389a72b0b409075960a425c9abed8d63 782 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 703 722 6.3E-54 T 23-04-2016 BUMPUSDA_RS02425 389a72b0b409075960a425c9abed8d63 782 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 356 375 6.3E-54 T 23-04-2016 BUMPUSDA_RS02425 389a72b0b409075960a425c9abed8d63 782 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 673 692 6.3E-54 T 23-04-2016 BUMPUSDA_RS02425 389a72b0b409075960a425c9abed8d63 782 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 726 744 6.3E-54 T 23-04-2016 BUMPUSDA_RS02425 389a72b0b409075960a425c9abed8d63 782 SMART SM00464 10 202 4.8E-69 T 23-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 BUMPUSDA_RS02425 389a72b0b409075960a425c9abed8d63 782 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 676 684 - T 23-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 BUMPUSDA_RS02425 389a72b0b409075960a425c9abed8d63 782 Hamap MF_01973 Lon protease [lon]. 11 772 71.093 T 23-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 BUMPUSDA_RS02425 389a72b0b409075960a425c9abed8d63 782 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 772 5.1E-94 T 23-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 BUMPUSDA_RS02425 389a72b0b409075960a425c9abed8d63 782 SUPERFAMILY SSF54211 595 770 2.28E-58 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold BUMPUSDA_RS02425 389a72b0b409075960a425c9abed8d63 782 SUPERFAMILY SSF52540 312 568 7.13E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02425 389a72b0b409075960a425c9abed8d63 782 PANTHER PTHR10046 1 776 0.0 T 23-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 BUMPUSDA_RS02425 389a72b0b409075960a425c9abed8d63 782 PANTHER PTHR10046:SF43 1 776 0.0 T 23-04-2016 BUMPUSDA_RS02425 389a72b0b409075960a425c9abed8d63 782 Gene3D G3DSA:3.40.50.300 311 499 6.2E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02425 389a72b0b409075960a425c9abed8d63 782 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 201 2.6E-39 T 23-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 BUMPUSDA_RS02425 389a72b0b409075960a425c9abed8d63 782 Gene3D G3DSA:1.10.8.60 500 584 1.1E-33 T 23-04-2016 BUMPUSDA_RS02425 389a72b0b409075960a425c9abed8d63 782 SUPERFAMILY SSF88697 10 201 5.47E-46 T 23-04-2016 IPR015947 PUA-like domain BUMPUSDA_RS02425 389a72b0b409075960a425c9abed8d63 782 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 352 488 2.4E-18 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 BUMPUSDA_RS00725 402707296efd60a5797e97a1fd110558 1076 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1054 0.0 T 23-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 BUMPUSDA_RS00725 402707296efd60a5797e97a1fd110558 1076 SMART SM01096 424 547 9.0E-71 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 BUMPUSDA_RS00725 402707296efd60a5797e97a1fd110558 1076 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 840 847 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BUMPUSDA_RS00725 402707296efd60a5797e97a1fd110558 1076 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BUMPUSDA_RS00725 402707296efd60a5797e97a1fd110558 1076 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 3.7E-39 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 BUMPUSDA_RS00725 402707296efd60a5797e97a1fd110558 1076 PANTHER PTHR11405 1 1076 0.0 T 23-04-2016 BUMPUSDA_RS00725 402707296efd60a5797e97a1fd110558 1076 Gene3D G3DSA:3.40.50.20 539 663 9.8E-61 T 23-04-2016 IPR016185 Pre-ATP-grasp domain BUMPUSDA_RS00725 402707296efd60a5797e97a1fd110558 1076 Gene3D G3DSA:3.30.1490.20 141 199 5.1E-23 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 BUMPUSDA_RS00725 402707296efd60a5797e97a1fd110558 1076 Pfam PF02142 MGS-like domain 958 1042 2.2E-16 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain BUMPUSDA_RS00725 402707296efd60a5797e97a1fd110558 1076 SMART SM00851 957 1043 4.8E-25 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain BUMPUSDA_RS00725 402707296efd60a5797e97a1fd110558 1076 SUPERFAMILY SSF56059 674 935 4.24E-97 T 23-04-2016 BUMPUSDA_RS00725 402707296efd60a5797e97a1fd110558 1076 PANTHER PTHR11405:SF5 1 1076 0.0 T 23-04-2016 BUMPUSDA_RS00725 402707296efd60a5797e97a1fd110558 1076 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 674 876 6.2E-34 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BUMPUSDA_RS00725 402707296efd60a5797e97a1fd110558 1076 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 129 334 1.7E-70 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BUMPUSDA_RS00725 402707296efd60a5797e97a1fd110558 1076 SUPERFAMILY SSF52335 939 1072 6.67E-35 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain BUMPUSDA_RS00725 402707296efd60a5797e97a1fd110558 1076 SUPERFAMILY SSF52440 557 676 2.01E-48 T 23-04-2016 IPR016185 Pre-ATP-grasp domain BUMPUSDA_RS00725 402707296efd60a5797e97a1fd110558 1076 Gene3D G3DSA:3.30.1490.20 688 751 7.3E-18 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 BUMPUSDA_RS00725 402707296efd60a5797e97a1fd110558 1076 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1064 13.015 T 23-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 BUMPUSDA_RS00725 402707296efd60a5797e97a1fd110558 1076 Gene3D G3DSA:1.10.1030.10 400 538 1.9E-48 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 BUMPUSDA_RS00725 402707296efd60a5797e97a1fd110558 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.4E-65 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 BUMPUSDA_RS00725 402707296efd60a5797e97a1fd110558 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.4E-65 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 BUMPUSDA_RS00725 402707296efd60a5797e97a1fd110558 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 1.4E-65 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 BUMPUSDA_RS00725 402707296efd60a5797e97a1fd110558 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 1.4E-65 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 BUMPUSDA_RS00725 402707296efd60a5797e97a1fd110558 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.4E-65 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 BUMPUSDA_RS00725 402707296efd60a5797e97a1fd110558 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.4E-65 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 BUMPUSDA_RS00725 402707296efd60a5797e97a1fd110558 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.4E-65 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 BUMPUSDA_RS00725 402707296efd60a5797e97a1fd110558 1076 Gene3D G3DSA:3.30.470.20 752 935 1.6E-70 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 BUMPUSDA_RS00725 402707296efd60a5797e97a1fd110558 1076 Gene3D G3DSA:3.30.470.20 200 399 1.9E-76 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 BUMPUSDA_RS00725 402707296efd60a5797e97a1fd110558 1076 Gene3D G3DSA:3.40.50.20 4 108 3.4E-44 T 23-04-2016 IPR016185 Pre-ATP-grasp domain BUMPUSDA_RS00725 402707296efd60a5797e97a1fd110558 1076 SUPERFAMILY SSF52440 1 127 3.74E-49 T 23-04-2016 IPR016185 Pre-ATP-grasp domain BUMPUSDA_RS00725 402707296efd60a5797e97a1fd110558 1076 Gene3D G3DSA:3.40.50.1380 939 1073 1.7E-37 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain BUMPUSDA_RS00725 402707296efd60a5797e97a1fd110558 1076 SUPERFAMILY SSF56059 128 401 7.25E-108 T 23-04-2016 BUMPUSDA_RS00725 402707296efd60a5797e97a1fd110558 1076 SUPERFAMILY SSF48108 396 554 1.2E-51 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 BUMPUSDA_RS00725 402707296efd60a5797e97a1fd110558 1076 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 710 724 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BUMPUSDA_RS00725 402707296efd60a5797e97a1fd110558 1076 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BUMPUSDA_RS02780 0bc9a68a03da547d9fca2b68f8420f05 177 Pfam PF00436 Single-strand binding protein family 6 112 8.2E-44 T 23-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 BUMPUSDA_RS02780 0bc9a68a03da547d9fca2b68f8420f05 177 Gene3D G3DSA:2.40.50.140 4 177 4.4E-59 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS02780 0bc9a68a03da547d9fca2b68f8420f05 177 PANTHER PTHR10302 4 177 1.4E-50 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 BUMPUSDA_RS02780 0bc9a68a03da547d9fca2b68f8420f05 177 SUPERFAMILY SSF50249 4 177 1.71E-56 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS02780 0bc9a68a03da547d9fca2b68f8420f05 177 Hamap MF_00984 Single-stranded DNA-binding protein. 6 117 39.929 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 BUMPUSDA_RS02780 0bc9a68a03da547d9fca2b68f8420f05 177 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 177 1.7E-58 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 BUMPUSDA_RS02780 0bc9a68a03da547d9fca2b68f8420f05 177 PIRSF PIRSF002070 2 164 8.5E-39 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 BUMPUSDA_RS02220 96abfef18670360d06652c2ec1ee92df 310 PANTHER PTHR11075 1 307 1.2E-138 T 23-04-2016 BUMPUSDA_RS02220 96abfef18670360d06652c2ec1ee92df 310 Gene3D G3DSA:3.30.160.20 173 251 5.9E-34 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain BUMPUSDA_RS02220 96abfef18670360d06652c2ec1ee92df 310 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 190 206 - T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 BUMPUSDA_RS02220 96abfef18670360d06652c2ec1ee92df 310 Pfam PF00472 RF-1 domain 174 282 1.5E-35 T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 BUMPUSDA_RS02220 96abfef18670360d06652c2ec1ee92df 310 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 307 1.3E-134 T 23-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 BUMPUSDA_RS02220 96abfef18670360d06652c2ec1ee92df 310 SUPERFAMILY SSF75620 3 307 3.92E-111 T 23-04-2016 BUMPUSDA_RS02220 96abfef18670360d06652c2ec1ee92df 310 PANTHER PTHR11075:SF6 1 307 1.2E-138 T 23-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 BUMPUSDA_RS02220 96abfef18670360d06652c2ec1ee92df 310 Gene3D G3DSA:1.20.58.410 1 60 1.1E-4 T 23-04-2016 BUMPUSDA_RS02220 96abfef18670360d06652c2ec1ee92df 310 SMART SM00937 30 140 1.7E-47 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 BUMPUSDA_RS02220 96abfef18670360d06652c2ec1ee92df 310 Pfam PF03462 PCRF domain 3 165 1.2E-43 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 BUMPUSDA_RS01455 3125663887895b2b736e6395715fb1fb 423 PANTHER PTHR11476 3 423 1.4E-179 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 BUMPUSDA_RS01455 3125663887895b2b736e6395715fb1fb 423 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 7 407 3.6E-144 T 23-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 BUMPUSDA_RS01455 3125663887895b2b736e6395715fb1fb 423 SUPERFAMILY SSF55681 6 320 1.04E-95 T 23-04-2016 BUMPUSDA_RS01455 3125663887895b2b736e6395715fb1fb 423 SUPERFAMILY SSF52954 329 421 5.23E-14 T 23-04-2016 IPR004154 Anticodon-binding BUMPUSDA_RS01455 3125663887895b2b736e6395715fb1fb 423 Pfam PF13393 Histidyl-tRNA synthetase 10 312 6.7E-40 T 23-04-2016 BUMPUSDA_RS01455 3125663887895b2b736e6395715fb1fb 423 PANTHER PTHR11476:SF9 3 423 1.4E-179 T 23-04-2016 BUMPUSDA_RS01455 3125663887895b2b736e6395715fb1fb 423 Gene3D G3DSA:3.40.50.800 327 410 8.1E-12 T 23-04-2016 IPR004154 Anticodon-binding BUMPUSDA_RS01455 3125663887895b2b736e6395715fb1fb 423 PIRSF PIRSF001549 2 421 2.4E-115 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 BUMPUSDA_RS01455 3125663887895b2b736e6395715fb1fb 423 Gene3D G3DSA:3.30.930.10 221 321 1.3E-90 T 23-04-2016 BUMPUSDA_RS01455 3125663887895b2b736e6395715fb1fb 423 Gene3D G3DSA:3.30.930.10 5 189 1.3E-90 T 23-04-2016 BUMPUSDA_RS01455 3125663887895b2b736e6395715fb1fb 423 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 421 31.28 T 23-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 BUMPUSDA_RS01150 d6b7c4f2243c4e889e9aa72af6715146 478 Gene3D G3DSA:2.30.42.10 293 383 3.5E-22 T 23-04-2016 IPR001478 PDZ domain GO:0005515 BUMPUSDA_RS01150 d6b7c4f2243c4e889e9aa72af6715146 478 Gene3D G3DSA:2.30.42.10 411 474 5.3E-12 T 23-04-2016 IPR001478 PDZ domain GO:0005515 BUMPUSDA_RS01150 d6b7c4f2243c4e889e9aa72af6715146 478 SMART SM00228 395 470 2.2E-5 T 23-04-2016 IPR001478 PDZ domain GO:0005515 BUMPUSDA_RS01150 d6b7c4f2243c4e889e9aa72af6715146 478 SMART SM00228 291 373 3.0E-7 T 23-04-2016 IPR001478 PDZ domain GO:0005515 BUMPUSDA_RS01150 d6b7c4f2243c4e889e9aa72af6715146 478 Pfam PF13365 Trypsin-like peptidase domain 116 252 6.8E-30 T 23-04-2016 BUMPUSDA_RS01150 d6b7c4f2243c4e889e9aa72af6715146 478 SUPERFAMILY SSF50156 407 474 1.06E-11 T 23-04-2016 IPR001478 PDZ domain GO:0005515 BUMPUSDA_RS01150 d6b7c4f2243c4e889e9aa72af6715146 478 PANTHER PTHR22939 43 65 5.0E-203 T 23-04-2016 BUMPUSDA_RS01150 d6b7c4f2243c4e889e9aa72af6715146 478 PANTHER PTHR22939 85 448 5.0E-203 T 23-04-2016 BUMPUSDA_RS01150 d6b7c4f2243c4e889e9aa72af6715146 478 PRINTS PR00834 HtrA/DegQ protease family signature 245 262 2.6E-57 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BUMPUSDA_RS01150 d6b7c4f2243c4e889e9aa72af6715146 478 PRINTS PR00834 HtrA/DegQ protease family signature 126 138 2.6E-57 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BUMPUSDA_RS01150 d6b7c4f2243c4e889e9aa72af6715146 478 PRINTS PR00834 HtrA/DegQ protease family signature 223 240 2.6E-57 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BUMPUSDA_RS01150 d6b7c4f2243c4e889e9aa72af6715146 478 PRINTS PR00834 HtrA/DegQ protease family signature 188 212 2.6E-57 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BUMPUSDA_RS01150 d6b7c4f2243c4e889e9aa72af6715146 478 PRINTS PR00834 HtrA/DegQ protease family signature 331 343 2.6E-57 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BUMPUSDA_RS01150 d6b7c4f2243c4e889e9aa72af6715146 478 PRINTS PR00834 HtrA/DegQ protease family signature 147 167 2.6E-57 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BUMPUSDA_RS01150 d6b7c4f2243c4e889e9aa72af6715146 478 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 44 476 5.0E-155 T 23-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 BUMPUSDA_RS01150 d6b7c4f2243c4e889e9aa72af6715146 478 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 290 355 1.2E-9 T 23-04-2016 IPR001478 PDZ domain GO:0005515 BUMPUSDA_RS01150 d6b7c4f2243c4e889e9aa72af6715146 478 Gene3D G3DSA:2.40.10.10 43 179 1.6E-31 T 23-04-2016 BUMPUSDA_RS01150 d6b7c4f2243c4e889e9aa72af6715146 478 PANTHER PTHR22939:SF84 43 65 5.0E-203 T 23-04-2016 BUMPUSDA_RS01150 d6b7c4f2243c4e889e9aa72af6715146 478 PANTHER PTHR22939:SF84 85 448 5.0E-203 T 23-04-2016 BUMPUSDA_RS01150 d6b7c4f2243c4e889e9aa72af6715146 478 SUPERFAMILY SSF50494 105 287 6.95E-61 T 23-04-2016 IPR009003 Peptidase S1, PA clan BUMPUSDA_RS01150 d6b7c4f2243c4e889e9aa72af6715146 478 SUPERFAMILY SSF50494 43 66 6.95E-61 T 23-04-2016 IPR009003 Peptidase S1, PA clan BUMPUSDA_RS01150 d6b7c4f2243c4e889e9aa72af6715146 478 Gene3D G3DSA:2.40.10.10 180 292 2.3E-41 T 23-04-2016 BUMPUSDA_RS01150 d6b7c4f2243c4e889e9aa72af6715146 478 SUPERFAMILY SSF50156 249 373 1.3E-18 T 23-04-2016 IPR001478 PDZ domain GO:0005515 BUMPUSDA_RS01205 5d79a458bf085a5bcc1d65570aaa7ccf 1161 Pfam PF14579 Helix-hairpin-helix motif 809 897 2.2E-21 T 23-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BUMPUSDA_RS01205 5d79a458bf085a5bcc1d65570aaa7ccf 1161 Gene3D G3DSA:1.10.150.280 837 884 9.2E-4 T 23-04-2016 BUMPUSDA_RS01205 5d79a458bf085a5bcc1d65570aaa7ccf 1161 SUPERFAMILY SSF50249 982 1064 3.94E-5 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS01205 5d79a458bf085a5bcc1d65570aaa7ccf 1161 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 292 736 3.3E-176 T 23-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BUMPUSDA_RS01205 5d79a458bf085a5bcc1d65570aaa7ccf 1161 SUPERFAMILY SSF89550 5 264 1.63E-17 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 BUMPUSDA_RS01205 5d79a458bf085a5bcc1d65570aaa7ccf 1161 SMART SM00481 7 74 7.1E-23 T 23-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 BUMPUSDA_RS01205 5d79a458bf085a5bcc1d65570aaa7ccf 1161 Pfam PF01336 OB-fold nucleic acid binding domain 995 1071 3.3E-8 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 BUMPUSDA_RS01205 5d79a458bf085a5bcc1d65570aaa7ccf 1161 PANTHER PTHR32294:SF0 2 1161 0.0 T 23-04-2016 BUMPUSDA_RS01205 5d79a458bf085a5bcc1d65570aaa7ccf 1161 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1032 0.0 T 23-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BUMPUSDA_RS01205 5d79a458bf085a5bcc1d65570aaa7ccf 1161 PANTHER PTHR32294 2 1161 0.0 T 23-04-2016 BUMPUSDA_RS01205 5d79a458bf085a5bcc1d65570aaa7ccf 1161 Pfam PF02811 PHP domain 8 173 6.6E-40 T 23-04-2016 IPR004013 PHP domain GO:0003824 BUMPUSDA_RS01205 5d79a458bf085a5bcc1d65570aaa7ccf 1161 Gene3D G3DSA:3.20.20.140 5 257 9.0E-22 T 23-04-2016 BUMPUSDA_RS01205 5d79a458bf085a5bcc1d65570aaa7ccf 1161 Gene3D G3DSA:2.40.50.140 985 1075 5.2E-6 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS01285 cc56449becdf7b68b6d24ef0c1f3a2d5 161 ProSitePatterns PS01317 SsrA-binding protein. 31 43 - T 23-04-2016 IPR020081 SsrA-binding protein, conserved site BUMPUSDA_RS01285 cc56449becdf7b68b6d24ef0c1f3a2d5 161 Gene3D G3DSA:2.40.280.10 13 132 9.6E-42 T 23-04-2016 IPR023620 Small protein B BUMPUSDA_RS01285 cc56449becdf7b68b6d24ef0c1f3a2d5 161 PANTHER PTHR30308 1 160 7.8E-58 T 23-04-2016 BUMPUSDA_RS01285 cc56449becdf7b68b6d24ef0c1f3a2d5 161 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 13 137 7.0E-51 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 BUMPUSDA_RS01285 cc56449becdf7b68b6d24ef0c1f3a2d5 161 TIGRFAM TIGR00086 smpB: SsrA-binding protein 13 155 7.2E-49 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 BUMPUSDA_RS01285 cc56449becdf7b68b6d24ef0c1f3a2d5 161 Pfam PF01668 SmpB protein 13 73 1.6E-22 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 BUMPUSDA_RS01285 cc56449becdf7b68b6d24ef0c1f3a2d5 161 SUPERFAMILY SSF74982 8 137 3.27E-43 T 23-04-2016 IPR023620 Small protein B BUMPUSDA_RS01285 cc56449becdf7b68b6d24ef0c1f3a2d5 161 Hamap MF_00023 SsrA-binding protein [smpB]. 1 160 54.733 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 BUMPUSDA_RS01285 cc56449becdf7b68b6d24ef0c1f3a2d5 161 PANTHER PTHR30308:SF2 1 160 7.8E-58 T 23-04-2016 BUMPUSDA_RS01590 11f1c0e1613d644fd54589ebb6eaf6d8 427 PANTHER PTHR11778:SF0 1 426 1.4E-176 T 23-04-2016 BUMPUSDA_RS01590 11f1c0e1613d644fd54589ebb6eaf6d8 427 SUPERFAMILY SSF55681 116 417 2.81E-94 T 23-04-2016 BUMPUSDA_RS01590 11f1c0e1613d644fd54589ebb6eaf6d8 427 SUPERFAMILY SSF46589 1 112 8.89E-19 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 BUMPUSDA_RS01590 11f1c0e1613d644fd54589ebb6eaf6d8 427 PRINTS PR00981 Seryl-tRNA synthetase signature 266 278 7.3E-31 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 BUMPUSDA_RS01590 11f1c0e1613d644fd54589ebb6eaf6d8 427 PRINTS PR00981 Seryl-tRNA synthetase signature 318 331 7.3E-31 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 BUMPUSDA_RS01590 11f1c0e1613d644fd54589ebb6eaf6d8 427 PRINTS PR00981 Seryl-tRNA synthetase signature 335 351 7.3E-31 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 BUMPUSDA_RS01590 11f1c0e1613d644fd54589ebb6eaf6d8 427 PRINTS PR00981 Seryl-tRNA synthetase signature 353 369 7.3E-31 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 BUMPUSDA_RS01590 11f1c0e1613d644fd54589ebb6eaf6d8 427 PRINTS PR00981 Seryl-tRNA synthetase signature 278 291 7.3E-31 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 BUMPUSDA_RS01590 11f1c0e1613d644fd54589ebb6eaf6d8 427 Gene3D G3DSA:3.30.930.10 105 423 2.2E-128 T 23-04-2016 BUMPUSDA_RS01590 11f1c0e1613d644fd54589ebb6eaf6d8 427 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 224 402 2.1E-37 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS01590 11f1c0e1613d644fd54589ebb6eaf6d8 427 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 1.3E-18 T 23-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 BUMPUSDA_RS01590 11f1c0e1613d644fd54589ebb6eaf6d8 427 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 425 37.807 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 BUMPUSDA_RS01590 11f1c0e1613d644fd54589ebb6eaf6d8 427 PIRSF PIRSF001529 1 427 3.1E-176 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 BUMPUSDA_RS01590 11f1c0e1613d644fd54589ebb6eaf6d8 427 Gene3D G3DSA:1.10.287.40 1 104 6.8E-13 T 23-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 BUMPUSDA_RS01590 11f1c0e1613d644fd54589ebb6eaf6d8 427 PANTHER PTHR11778 1 426 1.4E-176 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 BUMPUSDA_RS01590 11f1c0e1613d644fd54589ebb6eaf6d8 427 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 420 1.3E-155 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 BUMPUSDA_RS03010 00d66b58e8dd92fc37fc97799974e0c7 284 SUPERFAMILY SSF54506 148 282 1.53E-42 T 23-04-2016 BUMPUSDA_RS03010 00d66b58e8dd92fc37fc97799974e0c7 284 SUPERFAMILY SSF54506 12 136 2.17E-37 T 23-04-2016 BUMPUSDA_RS03010 00d66b58e8dd92fc37fc97799974e0c7 284 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 12 282 3.2E-77 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 BUMPUSDA_RS03010 00d66b58e8dd92fc37fc97799974e0c7 284 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 74 88 - T 23-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 BUMPUSDA_RS03010 00d66b58e8dd92fc37fc97799974e0c7 284 PANTHER PTHR31689:SF0 13 282 6.8E-93 T 23-04-2016 BUMPUSDA_RS03010 00d66b58e8dd92fc37fc97799974e0c7 284 Pfam PF01678 Diaminopimelate epimerase 163 277 2.9E-23 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 BUMPUSDA_RS03010 00d66b58e8dd92fc37fc97799974e0c7 284 Pfam PF01678 Diaminopimelate epimerase 13 133 6.5E-23 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 BUMPUSDA_RS03010 00d66b58e8dd92fc37fc97799974e0c7 284 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 11 284 32.628 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 BUMPUSDA_RS03010 00d66b58e8dd92fc37fc97799974e0c7 284 PANTHER PTHR31689 13 282 6.8E-93 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 BUMPUSDA_RS03010 00d66b58e8dd92fc37fc97799974e0c7 284 Gene3D G3DSA:3.10.310.10 12 129 1.0E-39 T 23-04-2016 BUMPUSDA_RS03010 00d66b58e8dd92fc37fc97799974e0c7 284 Gene3D G3DSA:3.10.310.10 130 272 4.3E-39 T 23-04-2016 BUMPUSDA_RS00430 891a5eddd13a695b40966b83ca2db01e 55 PANTHER PTHR15238 1 55 9.4E-21 T 23-04-2016 BUMPUSDA_RS00430 891a5eddd13a695b40966b83ca2db01e 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 9.0E-23 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS00430 891a5eddd13a695b40966b83ca2db01e 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 14.11 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS00430 891a5eddd13a695b40966b83ca2db01e 55 Pfam PF00471 Ribosomal protein L33 7 53 3.0E-17 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS00430 891a5eddd13a695b40966b83ca2db01e 55 SUPERFAMILY SSF57829 1 53 3.97E-18 T 23-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 BUMPUSDA_RS00430 891a5eddd13a695b40966b83ca2db01e 55 PANTHER PTHR15238:SF1 1 55 9.4E-21 T 23-04-2016 BUMPUSDA_RS01915 3ef0569dbff44905f7d0bad637da1fbe 881 Gene3D G3DSA:3.40.50.300 382 540 3.0E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01915 3ef0569dbff44905f7d0bad637da1fbe 881 SUPERFAMILY SSF52156 662 788 6.15E-35 T 23-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 BUMPUSDA_RS01915 3ef0569dbff44905f7d0bad637da1fbe 881 Gene3D G3DSA:3.30.56.50 2 49 1.3E-7 T 23-04-2016 BUMPUSDA_RS01915 3ef0569dbff44905f7d0bad637da1fbe 881 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 297 879 7.8E-263 T 23-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 BUMPUSDA_RS01915 3ef0569dbff44905f7d0bad637da1fbe 881 SUPERFAMILY SSF52540 382 549 1.89E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01915 3ef0569dbff44905f7d0bad637da1fbe 881 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 5 879 16.615 T 23-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 BUMPUSDA_RS01915 3ef0569dbff44905f7d0bad637da1fbe 881 SUPERFAMILY SSF50447 782 879 2.36E-30 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain BUMPUSDA_RS01915 3ef0569dbff44905f7d0bad637da1fbe 881 ProSitePatterns PS01176 Initiation factor 2 signature. 832 854 - T 23-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 BUMPUSDA_RS01915 3ef0569dbff44905f7d0bad637da1fbe 881 PANTHER PTHR23115:SF184 358 881 1.5E-195 T 23-04-2016 BUMPUSDA_RS01915 3ef0569dbff44905f7d0bad637da1fbe 881 Pfam PF00009 Elongation factor Tu GTP binding domain 386 542 4.0E-32 T 23-04-2016 BUMPUSDA_RS01915 3ef0569dbff44905f7d0bad637da1fbe 881 PANTHER PTHR23115 358 881 1.5E-195 T 23-04-2016 BUMPUSDA_RS01915 3ef0569dbff44905f7d0bad637da1fbe 881 Gene3D G3DSA:3.40.50.10050 682 760 1.4E-22 T 23-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 BUMPUSDA_RS01915 3ef0569dbff44905f7d0bad637da1fbe 881 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 384 540 1.0E-31 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 BUMPUSDA_RS01915 3ef0569dbff44905f7d0bad637da1fbe 881 Pfam PF11987 Translation-initiation factor 2 666 771 4.5E-34 T 23-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 BUMPUSDA_RS01915 3ef0569dbff44905f7d0bad637da1fbe 881 Gene3D G3DSA:2.40.30.10 554 645 3.8E-20 T 23-04-2016 BUMPUSDA_RS01915 3ef0569dbff44905f7d0bad637da1fbe 881 Gene3D G3DSA:2.40.30.10 783 879 7.2E-35 T 23-04-2016 BUMPUSDA_RS01915 3ef0569dbff44905f7d0bad637da1fbe 881 SUPERFAMILY SSF46955 3 50 2.93E-7 T 23-04-2016 IPR009061 Putative DNA-binding domain BUMPUSDA_RS01915 3ef0569dbff44905f7d0bad637da1fbe 881 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 306 355 8.5E-14 T 23-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal BUMPUSDA_RS01915 3ef0569dbff44905f7d0bad637da1fbe 881 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 60 94 1.3E-12 T 23-04-2016 IPR013575 Initiation factor 2 associated domain, bacterial BUMPUSDA_RS01915 3ef0569dbff44905f7d0bad637da1fbe 881 SUPERFAMILY SSF50447 554 636 2.75E-22 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain BUMPUSDA_RS02355 6eecda9069b6ed65916d5d3d831522a4 142 PANTHER PTHR11078 1 131 2.5E-48 T 23-04-2016 IPR011605 NusB antitermination factor GO:0006353 BUMPUSDA_RS02355 6eecda9069b6ed65916d5d3d831522a4 142 SUPERFAMILY SSF48013 3 132 1.07E-37 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 BUMPUSDA_RS02355 6eecda9069b6ed65916d5d3d831522a4 142 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 4 135 22.198 T 23-04-2016 IPR011605 NusB antitermination factor GO:0006353 BUMPUSDA_RS02355 6eecda9069b6ed65916d5d3d831522a4 142 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 6 131 2.0E-39 T 23-04-2016 IPR011605 NusB antitermination factor GO:0006353 BUMPUSDA_RS02355 6eecda9069b6ed65916d5d3d831522a4 142 Gene3D G3DSA:1.10.940.10 4 131 2.7E-38 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 BUMPUSDA_RS02355 6eecda9069b6ed65916d5d3d831522a4 142 Pfam PF01029 NusB family 7 131 2.2E-31 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 BUMPUSDA_RS01520 8a06006c85a34d3b7f733c3e945a2505 485 Gene3D G3DSA:1.25.40.80 150 166 2.1E-28 T 23-04-2016 BUMPUSDA_RS01520 8a06006c85a34d3b7f733c3e945a2505 485 Gene3D G3DSA:1.25.40.80 204 284 2.1E-28 T 23-04-2016 BUMPUSDA_RS01520 8a06006c85a34d3b7f733c3e945a2505 485 PANTHER PTHR11455 1 474 1.5E-174 T 23-04-2016 BUMPUSDA_RS01520 8a06006c85a34d3b7f733c3e945a2505 485 Gene3D G3DSA:3.40.50.620 2 149 1.8E-37 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BUMPUSDA_RS01520 8a06006c85a34d3b7f733c3e945a2505 485 Pfam PF00875 DNA photolyase 5 165 3.5E-33 T 23-04-2016 IPR006050 DNA photolyase, N-terminal BUMPUSDA_RS01520 8a06006c85a34d3b7f733c3e945a2505 485 Gene3D G3DSA:1.10.579.10 285 474 5.3E-72 T 23-04-2016 BUMPUSDA_RS01520 8a06006c85a34d3b7f733c3e945a2505 485 SUPERFAMILY SSF52425 4 176 9.68E-42 T 23-04-2016 IPR006050 DNA photolyase, N-terminal BUMPUSDA_RS01520 8a06006c85a34d3b7f733c3e945a2505 485 PANTHER PTHR11455:SF18 1 474 1.5E-174 T 23-04-2016 BUMPUSDA_RS01520 8a06006c85a34d3b7f733c3e945a2505 485 PRINTS PR00147 DNA photolyase signature 347 365 6.3E-21 T 23-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 BUMPUSDA_RS01520 8a06006c85a34d3b7f733c3e945a2505 485 PRINTS PR00147 DNA photolyase signature 386 400 6.3E-21 T 23-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 BUMPUSDA_RS01520 8a06006c85a34d3b7f733c3e945a2505 485 PRINTS PR00147 DNA photolyase signature 327 343 6.3E-21 T 23-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 BUMPUSDA_RS01520 8a06006c85a34d3b7f733c3e945a2505 485 SUPERFAMILY SSF48173 203 474 8.37E-99 T 23-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain BUMPUSDA_RS01520 8a06006c85a34d3b7f733c3e945a2505 485 Pfam PF03441 FAD binding domain of DNA photolyase 277 469 2.5E-76 T 23-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain BUMPUSDA_RS01520 8a06006c85a34d3b7f733c3e945a2505 485 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 327 339 - T 23-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal BUMPUSDA_RS02485 673256cbd387e80d6a0190751c96be02 461 Gene3D G3DSA:1.20.120.640 306 392 4.0E-16 T 23-04-2016 BUMPUSDA_RS02485 673256cbd387e80d6a0190751c96be02 461 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 460 2.4E-157 T 23-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 BUMPUSDA_RS02485 673256cbd387e80d6a0190751c96be02 461 SUPERFAMILY SSF47323 316 460 1.16E-31 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS02485 673256cbd387e80d6a0190751c96be02 461 Pfam PF09190 DALR domain 342 402 5.9E-16 T 23-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 BUMPUSDA_RS02485 673256cbd387e80d6a0190751c96be02 461 SMART SM00840 341 402 1.7E-17 T 23-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 BUMPUSDA_RS02485 673256cbd387e80d6a0190751c96be02 461 SUPERFAMILY SSF52374 1 312 1.39E-87 T 23-04-2016 BUMPUSDA_RS02485 673256cbd387e80d6a0190751c96be02 461 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 461 35.315 T 23-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 BUMPUSDA_RS02485 673256cbd387e80d6a0190751c96be02 461 Gene3D G3DSA:3.40.50.620 19 305 6.4E-95 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BUMPUSDA_RS02485 673256cbd387e80d6a0190751c96be02 461 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 312 2.3E-119 T 23-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 BUMPUSDA_RS02485 673256cbd387e80d6a0190751c96be02 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 1.8E-28 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 BUMPUSDA_RS02485 673256cbd387e80d6a0190751c96be02 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 1.8E-28 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 BUMPUSDA_RS02485 673256cbd387e80d6a0190751c96be02 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 1.8E-28 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 BUMPUSDA_RS02485 673256cbd387e80d6a0190751c96be02 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 1.8E-28 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 BUMPUSDA_RS02485 673256cbd387e80d6a0190751c96be02 461 PANTHER PTHR10890 1 459 2.3E-180 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 BUMPUSDA_RS01615 dc88927f7425accda484b7d90bbfb21f 238 PANTHER PTHR24220 6 233 5.4E-110 T 23-04-2016 BUMPUSDA_RS01615 dc88927f7425accda484b7d90bbfb21f 238 SMART SM00382 29 198 9.0E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain BUMPUSDA_RS01615 dc88927f7425accda484b7d90bbfb21f 238 Pfam PF00005 ABC transporter 20 149 2.2E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BUMPUSDA_RS01615 dc88927f7425accda484b7d90bbfb21f 238 PANTHER PTHR24220:SF466 6 233 5.4E-110 T 23-04-2016 BUMPUSDA_RS01615 dc88927f7425accda484b7d90bbfb21f 238 Gene3D G3DSA:3.40.50.300 5 216 5.7E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01615 dc88927f7425accda484b7d90bbfb21f 238 SUPERFAMILY SSF52540 5 216 4.5E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01785 36d6d591de3301c24393e3e083d56c29 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 2.3E-56 T 23-04-2016 BUMPUSDA_RS01785 36d6d591de3301c24393e3e083d56c29 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.1E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR BUMPUSDA_RS01785 36d6d591de3301c24393e3e083d56c29 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.1E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR BUMPUSDA_RS01785 36d6d591de3301c24393e3e083d56c29 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.1E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR BUMPUSDA_RS01785 36d6d591de3301c24393e3e083d56c29 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 1.1E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR BUMPUSDA_RS01785 36d6d591de3301c24393e3e083d56c29 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.1E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR BUMPUSDA_RS01785 36d6d591de3301c24393e3e083d56c29 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.1E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR BUMPUSDA_RS01785 36d6d591de3301c24393e3e083d56c29 244 PANTHER PTHR24322:SF635 151 183 4.2E-52 T 23-04-2016 BUMPUSDA_RS01785 36d6d591de3301c24393e3e083d56c29 244 PANTHER PTHR24322:SF635 10 135 4.2E-52 T 23-04-2016 BUMPUSDA_RS01785 36d6d591de3301c24393e3e083d56c29 244 PANTHER PTHR24322 151 183 4.2E-52 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR BUMPUSDA_RS01785 36d6d591de3301c24393e3e083d56c29 244 PANTHER PTHR24322 10 135 4.2E-52 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR BUMPUSDA_RS01785 36d6d591de3301c24393e3e083d56c29 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 3.0E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR BUMPUSDA_RS01785 36d6d591de3301c24393e3e083d56c29 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 3.0E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR BUMPUSDA_RS01785 36d6d591de3301c24393e3e083d56c29 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 3.0E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR BUMPUSDA_RS01785 36d6d591de3301c24393e3e083d56c29 244 SUPERFAMILY SSF51735 5 243 5.58E-76 T 23-04-2016 IPR016040 NAD(P)-binding domain BUMPUSDA_RS01785 36d6d591de3301c24393e3e083d56c29 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 1.1E-90 T 23-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 BUMPUSDA_RS01785 36d6d591de3301c24393e3e083d56c29 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BUMPUSDA_RS01785 36d6d591de3301c24393e3e083d56c29 244 Gene3D G3DSA:3.40.50.720 5 243 4.8E-77 T 23-04-2016 IPR016040 NAD(P)-binding domain BUMPUSDA_RS01945 53985ad81fea2fea698e2385b386b5c0 159 SUPERFAMILY SSF54534 82 158 5.49E-22 T 23-04-2016 BUMPUSDA_RS01945 53985ad81fea2fea698e2385b386b5c0 159 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 6 156 1.3E-56 T 23-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 BUMPUSDA_RS01945 53985ad81fea2fea698e2385b386b5c0 159 PANTHER PTHR30437 5 158 5.2E-64 T 23-04-2016 BUMPUSDA_RS01945 53985ad81fea2fea698e2385b386b5c0 159 Pfam PF03449 Transcription elongation factor, N-terminal 5 75 2.5E-30 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 BUMPUSDA_RS01945 53985ad81fea2fea698e2385b386b5c0 159 Gene3D G3DSA:3.10.50.30 82 158 3.5E-29 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 BUMPUSDA_RS01945 53985ad81fea2fea698e2385b386b5c0 159 Hamap MF_00105 Transcription elongation factor GreA [greA]. 3 157 31.706 T 23-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 BUMPUSDA_RS01945 53985ad81fea2fea698e2385b386b5c0 159 Gene3D G3DSA:1.10.287.180 5 76 3.7E-33 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 BUMPUSDA_RS01945 53985ad81fea2fea698e2385b386b5c0 159 SUPERFAMILY SSF46557 4 79 1.2E-27 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 BUMPUSDA_RS01945 53985ad81fea2fea698e2385b386b5c0 159 PIRSF PIRSF006092 1 159 1.3E-51 T 23-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 BUMPUSDA_RS01945 53985ad81fea2fea698e2385b386b5c0 159 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 18 49 - T 23-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 BUMPUSDA_RS01945 53985ad81fea2fea698e2385b386b5c0 159 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 84 158 7.4E-27 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 BUMPUSDA_RS01415 30f54cc885b9d59e24190c8a5078ba72 342 Pfam PF02885 Glycosyl transferase family, helical bundle domain 4 60 1.9E-13 T 23-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain BUMPUSDA_RS01415 30f54cc885b9d59e24190c8a5078ba72 342 Pfam PF00591 Glycosyl transferase family, a/b domain 74 320 5.0E-81 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 BUMPUSDA_RS01415 30f54cc885b9d59e24190c8a5078ba72 342 SUPERFAMILY SSF47648 1 67 2.75E-17 T 23-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain BUMPUSDA_RS01415 30f54cc885b9d59e24190c8a5078ba72 342 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 331 35.545 T 23-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 BUMPUSDA_RS01415 30f54cc885b9d59e24190c8a5078ba72 342 SUPERFAMILY SSF52418 70 327 6.41E-79 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 BUMPUSDA_RS01415 30f54cc885b9d59e24190c8a5078ba72 342 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 6 329 2.0E-117 T 23-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 BUMPUSDA_RS01415 30f54cc885b9d59e24190c8a5078ba72 342 Gene3D G3DSA:1.20.970.10 153 183 3.1E-33 T 23-04-2016 BUMPUSDA_RS01415 30f54cc885b9d59e24190c8a5078ba72 342 Gene3D G3DSA:1.20.970.10 1 63 3.1E-33 T 23-04-2016 BUMPUSDA_RS01415 30f54cc885b9d59e24190c8a5078ba72 342 PANTHER PTHR11922:SF5 35 46 1.6E-83 T 23-04-2016 BUMPUSDA_RS01415 30f54cc885b9d59e24190c8a5078ba72 342 PANTHER PTHR11922:SF5 67 336 1.6E-83 T 23-04-2016 BUMPUSDA_RS01415 30f54cc885b9d59e24190c8a5078ba72 342 PANTHER PTHR11922 35 46 1.6E-83 T 23-04-2016 BUMPUSDA_RS01415 30f54cc885b9d59e24190c8a5078ba72 342 PANTHER PTHR11922 67 336 1.6E-83 T 23-04-2016 BUMPUSDA_RS01415 30f54cc885b9d59e24190c8a5078ba72 342 Gene3D G3DSA:3.40.1030.10 75 152 4.3E-70 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 BUMPUSDA_RS01415 30f54cc885b9d59e24190c8a5078ba72 342 Gene3D G3DSA:3.40.1030.10 190 325 4.3E-70 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 BUMPUSDA_RS01065 a4904ff5c26a4f0500381402e16a702c 114 Gene3D G3DSA:2.60.300.12 9 103 3.4E-28 T 23-04-2016 IPR000361 FeS cluster biogenesis BUMPUSDA_RS01065 a4904ff5c26a4f0500381402e16a702c 114 Pfam PF01521 Iron-sulphur cluster biosynthesis 8 109 2.6E-20 T 23-04-2016 IPR000361 FeS cluster biogenesis BUMPUSDA_RS01065 a4904ff5c26a4f0500381402e16a702c 114 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 95 112 - T 23-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site BUMPUSDA_RS01065 a4904ff5c26a4f0500381402e16a702c 114 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 10 113 1.1E-37 T 23-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 BUMPUSDA_RS01065 a4904ff5c26a4f0500381402e16a702c 114 PANTHER PTHR10072 6 114 7.5E-44 T 23-04-2016 BUMPUSDA_RS01065 a4904ff5c26a4f0500381402e16a702c 114 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 114 34.047 T 23-04-2016 IPR023063 FeS cluster insertion protein ErpA GO:0016226 BUMPUSDA_RS01065 a4904ff5c26a4f0500381402e16a702c 114 SUPERFAMILY SSF89360 8 103 2.49E-29 T 23-04-2016 IPR000361 FeS cluster biogenesis BUMPUSDA_RS02565 17e66a0842401a9c8aceaca843c533d3 38 Pfam PF00444 Ribosomal protein L36 1 38 8.5E-18 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02565 17e66a0842401a9c8aceaca843c533d3 38 SUPERFAMILY SSF57840 1 38 2.88E-15 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02565 17e66a0842401a9c8aceaca843c533d3 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 16.649 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02565 17e66a0842401a9c8aceaca843c533d3 38 PANTHER PTHR18804 1 38 1.3E-14 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02565 17e66a0842401a9c8aceaca843c533d3 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 11 38 6.0E-8 T 23-04-2016 BUMPUSDA_RS02565 17e66a0842401a9c8aceaca843c533d3 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02565 17e66a0842401a9c8aceaca843c533d3 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 5.1E-21 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02960 9e91d632c531dd4a5310adfd4d0ca15f 443 Gene3D G3DSA:1.10.8.10 111 177 7.7E-27 T 23-04-2016 BUMPUSDA_RS02960 9e91d632c531dd4a5310adfd4d0ca15f 443 Gene3D G3DSA:1.10.8.10 213 243 7.7E-27 T 23-04-2016 BUMPUSDA_RS02960 9e91d632c531dd4a5310adfd4d0ca15f 443 PANTHER PTHR11262:SF3 1 105 4.5E-207 T 23-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 BUMPUSDA_RS02960 9e91d632c531dd4a5310adfd4d0ca15f 443 PANTHER PTHR11262:SF3 218 443 4.5E-207 T 23-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 BUMPUSDA_RS02960 9e91d632c531dd4a5310adfd4d0ca15f 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 135 2.8E-7 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 BUMPUSDA_RS02960 9e91d632c531dd4a5310adfd4d0ca15f 443 SUPERFAMILY SSF52540 3 441 6.61E-92 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02960 9e91d632c531dd4a5310adfd4d0ca15f 443 Gene3D G3DSA:1.10.8.60 335 443 7.6E-36 T 23-04-2016 BUMPUSDA_RS02960 9e91d632c531dd4a5310adfd4d0ca15f 443 SMART SM00382 49 332 2.3E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain BUMPUSDA_RS02960 9e91d632c531dd4a5310adfd4d0ca15f 443 SMART SM01086 335 429 5.2E-21 T 23-04-2016 IPR019489 Clp ATPase, C-terminal BUMPUSDA_RS02960 9e91d632c531dd4a5310adfd4d0ca15f 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 187 328 3.0E-42 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 BUMPUSDA_RS02960 9e91d632c531dd4a5310adfd4d0ca15f 443 Gene3D G3DSA:3.40.50.300 3 110 6.6E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02960 9e91d632c531dd4a5310adfd4d0ca15f 443 Gene3D G3DSA:3.40.50.300 245 331 6.6E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02960 9e91d632c531dd4a5310adfd4d0ca15f 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 6.3E-213 T 23-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 BUMPUSDA_RS02960 9e91d632c531dd4a5310adfd4d0ca15f 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 41.556 T 23-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 BUMPUSDA_RS02960 9e91d632c531dd4a5310adfd4d0ca15f 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 405 3.8E-6 T 23-04-2016 IPR019489 Clp ATPase, C-terminal BUMPUSDA_RS02960 9e91d632c531dd4a5310adfd4d0ca15f 443 PANTHER PTHR11262 1 105 4.5E-207 T 23-04-2016 BUMPUSDA_RS02960 9e91d632c531dd4a5310adfd4d0ca15f 443 PANTHER PTHR11262 218 443 4.5E-207 T 23-04-2016 BUMPUSDA_RS00120 375d7aba6a546eed6f8f088407614b30 190 PANTHER PTHR18895 14 190 3.9E-36 T 23-04-2016 BUMPUSDA_RS00120 375d7aba6a546eed6f8f088407614b30 190 PIRSF PIRSF004553 11 190 1.2E-56 T 23-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 BUMPUSDA_RS00120 375d7aba6a546eed6f8f088407614b30 190 PANTHER PTHR18895:SF60 14 190 3.9E-36 T 23-04-2016 BUMPUSDA_RS00120 375d7aba6a546eed6f8f088407614b30 190 Gene3D G3DSA:3.40.50.150 8 187 3.8E-55 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BUMPUSDA_RS00120 375d7aba6a546eed6f8f088407614b30 190 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 124 130 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BUMPUSDA_RS00120 375d7aba6a546eed6f8f088407614b30 190 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 5 186 6.1E-52 T 23-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 BUMPUSDA_RS00120 375d7aba6a546eed6f8f088407614b30 190 Pfam PF03602 Conserved hypothetical protein 95 13 186 8.6E-57 T 23-04-2016 BUMPUSDA_RS00120 375d7aba6a546eed6f8f088407614b30 190 SUPERFAMILY SSF53335 13 186 3.8E-44 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BUMPUSDA_RS00080 3241dbc056a90b40d1de3b016cb75c2a 453 SUPERFAMILY SSF52540 72 170 4.57E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS00080 3241dbc056a90b40d1de3b016cb75c2a 453 SUPERFAMILY SSF52540 204 373 4.57E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS00080 3241dbc056a90b40d1de3b016cb75c2a 453 Gene3D G3DSA:1.20.120.430 248 271 5.6E-48 T 23-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 BUMPUSDA_RS00080 3241dbc056a90b40d1de3b016cb75c2a 453 Gene3D G3DSA:1.20.120.430 122 182 5.6E-48 T 23-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 BUMPUSDA_RS00080 3241dbc056a90b40d1de3b016cb75c2a 453 Gene3D G3DSA:1.20.120.430 383 453 5.6E-48 T 23-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 BUMPUSDA_RS00080 3241dbc056a90b40d1de3b016cb75c2a 453 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 216 372 2.2E-26 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 BUMPUSDA_RS00080 3241dbc056a90b40d1de3b016cb75c2a 453 PANTHER PTHR11649:SF56 8 453 9.9E-136 T 23-04-2016 BUMPUSDA_RS00080 3241dbc056a90b40d1de3b016cb75c2a 453 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 453 30.185 T 23-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 BUMPUSDA_RS00080 3241dbc056a90b40d1de3b016cb75c2a 453 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 120 1.1E-32 T 23-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal BUMPUSDA_RS00080 3241dbc056a90b40d1de3b016cb75c2a 453 Gene3D G3DSA:3.30.1360.120 3 121 6.5E-37 T 23-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 BUMPUSDA_RS00080 3241dbc056a90b40d1de3b016cb75c2a 453 Pfam PF01926 50S ribosome-binding GTPase 218 336 4.3E-25 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 BUMPUSDA_RS00080 3241dbc056a90b40d1de3b016cb75c2a 453 Gene3D G3DSA:3.40.50.300 214 247 1.0E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS00080 3241dbc056a90b40d1de3b016cb75c2a 453 Pfam PF12631 MnmE helical domain 123 450 1.1E-44 T 23-04-2016 IPR025867 MnmE, helical domain BUMPUSDA_RS00080 3241dbc056a90b40d1de3b016cb75c2a 453 PANTHER PTHR11649 8 453 9.9E-136 T 23-04-2016 BUMPUSDA_RS00080 3241dbc056a90b40d1de3b016cb75c2a 453 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 12 453 1.2E-99 T 23-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 BUMPUSDA_RS00080 3241dbc056a90b40d1de3b016cb75c2a 453 Gene3D G3DSA:3.40.50.300 288 382 2.9E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01665 0da0449c00b4ed9643dd24b99161743d 270 PANTHER PTHR13696:SF1 1 258 4.8E-88 T 23-04-2016 BUMPUSDA_RS01665 0da0449c00b4ed9643dd24b99161743d 270 Gene3D G3DSA:3.40.50.300 1 248 4.1E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01665 0da0449c00b4ed9643dd24b99161743d 270 PIRSF PIRSF003092 1 270 8.3E-97 T 23-04-2016 IPR025501 ATP binding protein MinD BUMPUSDA_RS01665 0da0449c00b4ed9643dd24b99161743d 270 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 217 4.0E-28 T 23-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain BUMPUSDA_RS01665 0da0449c00b4ed9643dd24b99161743d 270 SUPERFAMILY SSF52540 1 269 6.19E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01665 0da0449c00b4ed9643dd24b99161743d 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 3 268 5.7E-105 T 23-04-2016 IPR010223 ATP binding protein MinD, bacterial-type GO:0000918|GO:0016887 BUMPUSDA_RS01665 0da0449c00b4ed9643dd24b99161743d 270 PANTHER PTHR13696 1 258 4.8E-88 T 23-04-2016 BUMPUSDA_RS01450 bd42eadba5526b82e51daccf4380ccb6 368 PANTHER PTHR30454 7 362 2.7E-189 T 23-04-2016 BUMPUSDA_RS01450 bd42eadba5526b82e51daccf4380ccb6 368 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 34.752 T 23-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 BUMPUSDA_RS01450 bd42eadba5526b82e51daccf4380ccb6 368 Gene3D G3DSA:3.20.20.70 30 132 2.4E-6 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 BUMPUSDA_RS01450 bd42eadba5526b82e51daccf4380ccb6 368 SUPERFAMILY SSF51366 23 142 3.15E-6 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 BUMPUSDA_RS01450 bd42eadba5526b82e51daccf4380ccb6 368 SUPERFAMILY SSF56014 265 347 1.1E-10 T 23-04-2016 BUMPUSDA_RS01450 bd42eadba5526b82e51daccf4380ccb6 368 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 350 6.4E-121 T 23-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 BUMPUSDA_RS01450 bd42eadba5526b82e51daccf4380ccb6 368 Pfam PF04551 GcpE protein 14 353 1.8E-127 T 23-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 BUMPUSDA_RS01450 bd42eadba5526b82e51daccf4380ccb6 368 PIRSF PIRSF004640 1 364 1.3E-142 T 23-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 BUMPUSDA_RS00310 0a97ae0d1e4168ff27baa01dee110fdc 412 Gene3D G3DSA:3.30.460.10 1 121 1.0E-27 T 23-04-2016 BUMPUSDA_RS00310 0a97ae0d1e4168ff27baa01dee110fdc 412 SUPERFAMILY SSF81891 120 399 1.44E-33 T 23-04-2016 BUMPUSDA_RS00310 0a97ae0d1e4168ff27baa01dee110fdc 412 PANTHER PTHR13734 1 260 1.6E-51 T 23-04-2016 BUMPUSDA_RS00310 0a97ae0d1e4168ff27baa01dee110fdc 412 Gene3D G3DSA:1.10.3090.10 122 354 5.4E-28 T 23-04-2016 BUMPUSDA_RS00310 0a97ae0d1e4168ff27baa01dee110fdc 412 PIRSF PIRSF000813 1 408 7.6E-134 T 23-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 BUMPUSDA_RS00310 0a97ae0d1e4168ff27baa01dee110fdc 412 Pfam PF01743 Poly A polymerase head domain 3 122 4.3E-18 T 23-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 BUMPUSDA_RS00310 0a97ae0d1e4168ff27baa01dee110fdc 412 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 47.8 T 23-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 BUMPUSDA_RS00310 0a97ae0d1e4168ff27baa01dee110fdc 412 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 210 4.8E-8 T 23-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain BUMPUSDA_RS00310 0a97ae0d1e4168ff27baa01dee110fdc 412 SUPERFAMILY SSF81301 1 118 3.05E-27 T 23-04-2016 BUMPUSDA_RS00480 2fdf8f4201368d357908930e1f78be9a 294 Gene3D G3DSA:3.20.20.70 1 291 5.7E-109 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 BUMPUSDA_RS00480 2fdf8f4201368d357908930e1f78be9a 294 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 61.573 T 23-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 BUMPUSDA_RS00480 2fdf8f4201368d357908930e1f78be9a 294 SUPERFAMILY SSF51569 2 289 7.12E-93 T 23-04-2016 BUMPUSDA_RS00480 2fdf8f4201368d357908930e1f78be9a 294 PIRSF PIRSF001365 1 294 8.1E-90 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 BUMPUSDA_RS00480 2fdf8f4201368d357908930e1f78be9a 294 PANTHER PTHR12128:SF34 1 292 1.3E-137 T 23-04-2016 BUMPUSDA_RS00480 2fdf8f4201368d357908930e1f78be9a 294 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 287 9.3E-120 T 23-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 BUMPUSDA_RS00480 2fdf8f4201368d357908930e1f78be9a 294 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 23-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 BUMPUSDA_RS00480 2fdf8f4201368d357908930e1f78be9a 294 PANTHER PTHR12128 1 292 1.3E-137 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 BUMPUSDA_RS00480 2fdf8f4201368d357908930e1f78be9a 294 Pfam PF00701 Dihydrodipicolinate synthetase family 2 287 6.3E-113 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 BUMPUSDA_RS00480 2fdf8f4201368d357908930e1f78be9a 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 1.6E-33 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 BUMPUSDA_RS00480 2fdf8f4201368d357908930e1f78be9a 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 1.6E-33 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 BUMPUSDA_RS00480 2fdf8f4201368d357908930e1f78be9a 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 1.6E-33 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 BUMPUSDA_RS00480 2fdf8f4201368d357908930e1f78be9a 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 1.6E-33 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 BUMPUSDA_RS00480 2fdf8f4201368d357908930e1f78be9a 294 SMART SM01130 1 289 2.3E-125 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 BUMPUSDA_RS00480 2fdf8f4201368d357908930e1f78be9a 294 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 23-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 BUMPUSDA_RS02410 957345b66f193f2cc9e08ab8acf9555b 436 SUPERFAMILY SSF54534 134 245 6.98E-13 T 23-04-2016 BUMPUSDA_RS02410 957345b66f193f2cc9e08ab8acf9555b 436 Pfam PF05697 Bacterial trigger factor protein (TF) 1 145 1.3E-30 T 23-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 BUMPUSDA_RS02410 957345b66f193f2cc9e08ab8acf9555b 436 Gene3D G3DSA:1.10.3120.10 234 379 1.8E-16 T 23-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 BUMPUSDA_RS02410 957345b66f193f2cc9e08ab8acf9555b 436 SUPERFAMILY SSF109998 265 425 7.26E-17 T 23-04-2016 IPR027304 Trigger factor/SurA domain BUMPUSDA_RS02410 957345b66f193f2cc9e08ab8acf9555b 436 Hamap MF_00303 Trigger factor [tig]. 1 417 14.598 T 23-04-2016 IPR005215 Trigger factor GO:0015031 BUMPUSDA_RS02410 957345b66f193f2cc9e08ab8acf9555b 436 PIRSF PIRSF003095 1 431 1.8E-76 T 23-04-2016 IPR005215 Trigger factor GO:0015031 BUMPUSDA_RS02410 957345b66f193f2cc9e08ab8acf9555b 436 PANTHER PTHR30560 1 426 1.5E-39 T 23-04-2016 BUMPUSDA_RS02410 957345b66f193f2cc9e08ab8acf9555b 436 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 264 409 3.9E-13 T 23-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 BUMPUSDA_RS02410 957345b66f193f2cc9e08ab8acf9555b 436 Gene3D G3DSA:3.10.50.40 160 233 4.0E-7 T 23-04-2016 BUMPUSDA_RS02410 957345b66f193f2cc9e08ab8acf9555b 436 SUPERFAMILY SSF102735 1 129 5.49E-30 T 23-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 BUMPUSDA_RS02410 957345b66f193f2cc9e08ab8acf9555b 436 TIGRFAM TIGR00115 tig: trigger factor 13 408 2.7E-74 T 23-04-2016 IPR005215 Trigger factor GO:0015031 BUMPUSDA_RS02410 957345b66f193f2cc9e08ab8acf9555b 436 Gene3D G3DSA:3.30.70.1050 1 120 2.4E-27 T 23-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 BUMPUSDA_RS02310 012423ab7fe7a3b0f53c49c31376ea02 1167 Gene3D G3DSA:1.10.486.10 581 717 1.5E-20 T 23-04-2016 BUMPUSDA_RS02310 012423ab7fe7a3b0f53c49c31376ea02 1167 Pfam PF13361 UvrD-like helicase C-terminal domain 528 805 3.0E-18 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 BUMPUSDA_RS02310 012423ab7fe7a3b0f53c49c31376ea02 1167 Gene3D G3DSA:1.10.3170.10 157 346 2.5E-36 T 23-04-2016 BUMPUSDA_RS02310 012423ab7fe7a3b0f53c49c31376ea02 1167 SUPERFAMILY SSF52980 898 1165 7.51E-68 T 23-04-2016 IPR011335 Restriction endonuclease type II-like BUMPUSDA_RS02310 012423ab7fe7a3b0f53c49c31376ea02 1167 Pfam PF00580 UvrD/REP helicase N-terminal domain 6 434 1.3E-53 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 BUMPUSDA_RS02310 012423ab7fe7a3b0f53c49c31376ea02 1167 Gene3D G3DSA:3.40.50.300 447 578 3.0E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02310 012423ab7fe7a3b0f53c49c31376ea02 1167 Gene3D G3DSA:3.40.50.300 724 855 3.0E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02310 012423ab7fe7a3b0f53c49c31376ea02 1167 SUPERFAMILY SSF52540 119 203 1.33E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02310 012423ab7fe7a3b0f53c49c31376ea02 1167 SUPERFAMILY SSF52540 10 81 1.33E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02310 012423ab7fe7a3b0f53c49c31376ea02 1167 SUPERFAMILY SSF52540 792 817 1.33E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02310 012423ab7fe7a3b0f53c49c31376ea02 1167 SUPERFAMILY SSF52540 324 764 1.33E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02310 012423ab7fe7a3b0f53c49c31376ea02 1167 PANTHER PTHR11070 119 216 3.5E-206 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 BUMPUSDA_RS02310 012423ab7fe7a3b0f53c49c31376ea02 1167 PANTHER PTHR11070 791 1162 3.5E-206 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 BUMPUSDA_RS02310 012423ab7fe7a3b0f53c49c31376ea02 1167 PANTHER PTHR11070 299 771 3.5E-206 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 BUMPUSDA_RS02310 012423ab7fe7a3b0f53c49c31376ea02 1167 PANTHER PTHR11070 1 90 3.5E-206 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 BUMPUSDA_RS02310 012423ab7fe7a3b0f53c49c31376ea02 1167 Gene3D G3DSA:3.40.50.300 349 446 5.8E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02310 012423ab7fe7a3b0f53c49c31376ea02 1167 Gene3D G3DSA:3.40.50.300 121 150 5.8E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02310 012423ab7fe7a3b0f53c49c31376ea02 1167 Gene3D G3DSA:3.40.50.300 3 83 5.8E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02310 012423ab7fe7a3b0f53c49c31376ea02 1167 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 6 1167 12.778 T 23-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 BUMPUSDA_RS02310 012423ab7fe7a3b0f53c49c31376ea02 1167 Gene3D G3DSA:3.90.320.10 891 1166 4.9E-71 T 23-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 BUMPUSDA_RS02310 012423ab7fe7a3b0f53c49c31376ea02 1167 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 9 1165 0.0 T 23-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 BUMPUSDA_RS02310 012423ab7fe7a3b0f53c49c31376ea02 1167 PANTHER PTHR11070:SF23 119 216 3.5E-206 T 23-04-2016 BUMPUSDA_RS02310 012423ab7fe7a3b0f53c49c31376ea02 1167 PANTHER PTHR11070:SF23 791 1162 3.5E-206 T 23-04-2016 BUMPUSDA_RS02310 012423ab7fe7a3b0f53c49c31376ea02 1167 PANTHER PTHR11070:SF23 299 771 3.5E-206 T 23-04-2016 BUMPUSDA_RS02310 012423ab7fe7a3b0f53c49c31376ea02 1167 PANTHER PTHR11070:SF23 1 90 3.5E-206 T 23-04-2016 BUMPUSDA_RS01055 fc0f4318fd2a892ce4a59b5de2d76b64 286 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 81 94 - T 23-04-2016 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 BUMPUSDA_RS01055 fc0f4318fd2a892ce4a59b5de2d76b64 286 PANTHER PTHR11558 21 285 4.0E-95 T 23-04-2016 BUMPUSDA_RS01055 fc0f4318fd2a892ce4a59b5de2d76b64 286 TIGRFAM TIGR00417 speE: spermidine synthase 12 278 3.5E-94 T 23-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 BUMPUSDA_RS01055 fc0f4318fd2a892ce4a59b5de2d76b64 286 Pfam PF01564 Spermine/spermidine synthase 15 241 3.0E-74 T 23-04-2016 BUMPUSDA_RS01055 fc0f4318fd2a892ce4a59b5de2d76b64 286 Gene3D G3DSA:2.30.140.10 6 56 2.4E-13 T 23-04-2016 BUMPUSDA_RS01055 fc0f4318fd2a892ce4a59b5de2d76b64 286 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 6 284 36.18 T 23-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 BUMPUSDA_RS01055 fc0f4318fd2a892ce4a59b5de2d76b64 286 SUPERFAMILY SSF53335 7 284 1.23E-80 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BUMPUSDA_RS01055 fc0f4318fd2a892ce4a59b5de2d76b64 286 Gene3D G3DSA:3.40.50.150 57 284 6.6E-76 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BUMPUSDA_RS01110 46e636c118e5359a4fbc7e9558ddd608 460 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 448 5.8E-138 T 23-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 BUMPUSDA_RS01110 46e636c118e5359a4fbc7e9558ddd608 460 Pfam PF01225 Mur ligase family, catalytic domain 26 71 4.0E-5 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 BUMPUSDA_RS01110 46e636c118e5359a4fbc7e9558ddd608 460 PANTHER PTHR23135:SF3 11 449 2.8E-130 T 23-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 BUMPUSDA_RS01110 46e636c118e5359a4fbc7e9558ddd608 460 Pfam PF02875 Mur ligase family, glutamate ligase domain 316 390 4.5E-11 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 BUMPUSDA_RS01110 46e636c118e5359a4fbc7e9558ddd608 460 SUPERFAMILY SSF53623 101 310 1.44E-49 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 BUMPUSDA_RS01110 46e636c118e5359a4fbc7e9558ddd608 460 SUPERFAMILY SSF63418 1 96 4.58E-22 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 BUMPUSDA_RS01110 46e636c118e5359a4fbc7e9558ddd608 460 Gene3D G3DSA:3.90.190.20 316 452 1.2E-39 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 BUMPUSDA_RS01110 46e636c118e5359a4fbc7e9558ddd608 460 SUPERFAMILY SSF53244 316 448 2.13E-35 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 BUMPUSDA_RS01110 46e636c118e5359a4fbc7e9558ddd608 460 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 449 31.194 T 23-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 BUMPUSDA_RS01110 46e636c118e5359a4fbc7e9558ddd608 460 Gene3D G3DSA:3.40.1390.10 1 72 6.8E-19 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 BUMPUSDA_RS01110 46e636c118e5359a4fbc7e9558ddd608 460 PANTHER PTHR23135 11 449 2.8E-130 T 23-04-2016 BUMPUSDA_RS01110 46e636c118e5359a4fbc7e9558ddd608 460 Pfam PF08245 Mur ligase middle domain 106 294 2.2E-45 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 BUMPUSDA_RS01110 46e636c118e5359a4fbc7e9558ddd608 460 Gene3D G3DSA:3.40.1190.10 83 309 1.9E-61 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 BUMPUSDA_RS02045 135b058f52ab822c47ff3b7cc6d2609b 61 PANTHER PTHR34984:SF1 1 60 2.6E-32 T 23-04-2016 BUMPUSDA_RS02045 135b058f52ab822c47ff3b7cc6d2609b 61 Hamap MF_00167 Carbon storage regulator [csrA]. 1 61 20.299 T 23-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 BUMPUSDA_RS02045 135b058f52ab822c47ff3b7cc6d2609b 61 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 1.0E-19 T 23-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 BUMPUSDA_RS02045 135b058f52ab822c47ff3b7cc6d2609b 61 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 58 6.3E-31 T 23-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 BUMPUSDA_RS02045 135b058f52ab822c47ff3b7cc6d2609b 61 SUPERFAMILY SSF117130 1 54 3.14E-21 T 23-04-2016 BUMPUSDA_RS02045 135b058f52ab822c47ff3b7cc6d2609b 61 Pfam PF02599 Global regulator protein family 1 52 2.3E-27 T 23-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 BUMPUSDA_RS02045 135b058f52ab822c47ff3b7cc6d2609b 61 PANTHER PTHR34984 1 60 2.6E-32 T 23-04-2016 BUMPUSDA_RS01560 d2bae1b8f609e85717ca727523b6f7d5 94 SUPERFAMILY SSF47729 1 91 8.1E-28 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 BUMPUSDA_RS01560 d2bae1b8f609e85717ca727523b6f7d5 94 Pfam PF00216 Bacterial DNA-binding protein 1 90 4.4E-27 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 BUMPUSDA_RS01560 d2bae1b8f609e85717ca727523b6f7d5 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 23-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 BUMPUSDA_RS01560 d2bae1b8f609e85717ca727523b6f7d5 94 SMART SM00411 1 91 8.5E-39 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 BUMPUSDA_RS01560 d2bae1b8f609e85717ca727523b6f7d5 94 Gene3D G3DSA:4.10.520.10 1 91 9.6E-30 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 BUMPUSDA_RS01560 d2bae1b8f609e85717ca727523b6f7d5 94 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 28.701 T 23-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 BUMPUSDA_RS01560 d2bae1b8f609e85717ca727523b6f7d5 94 PANTHER PTHR33175 1 93 1.1E-39 T 23-04-2016 BUMPUSDA_RS01560 d2bae1b8f609e85717ca727523b6f7d5 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 3.5E-17 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 BUMPUSDA_RS01560 d2bae1b8f609e85717ca727523b6f7d5 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 3.5E-17 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 BUMPUSDA_RS01560 d2bae1b8f609e85717ca727523b6f7d5 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 3.5E-17 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 BUMPUSDA_RS01560 d2bae1b8f609e85717ca727523b6f7d5 94 PANTHER PTHR33175:SF5 1 93 1.1E-39 T 23-04-2016 BUMPUSDA_RS01560 d2bae1b8f609e85717ca727523b6f7d5 94 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 93 1.8E-41 T 23-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 BUMPUSDA_RS02680 be56859b5287bd2474734abee86cea66 394 PANTHER PTHR23115:SF151 1 392 2.9E-295 T 23-04-2016 BUMPUSDA_RS02680 be56859b5287bd2474734abee86cea66 394 Gene3D G3DSA:2.40.30.10 301 393 6.4E-46 T 23-04-2016 BUMPUSDA_RS02680 be56859b5287bd2474734abee86cea66 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site BUMPUSDA_RS02680 be56859b5287bd2474734abee86cea66 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 2.1E-235 T 23-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 BUMPUSDA_RS02680 be56859b5287bd2474734abee86cea66 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 60.502 T 23-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 BUMPUSDA_RS02680 be56859b5287bd2474734abee86cea66 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.7E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BUMPUSDA_RS02680 be56859b5287bd2474734abee86cea66 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.7E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BUMPUSDA_RS02680 be56859b5287bd2474734abee86cea66 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.7E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BUMPUSDA_RS02680 be56859b5287bd2474734abee86cea66 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.7E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BUMPUSDA_RS02680 be56859b5287bd2474734abee86cea66 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BUMPUSDA_RS02680 be56859b5287bd2474734abee86cea66 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 3.1E-57 T 23-04-2016 BUMPUSDA_RS02680 be56859b5287bd2474734abee86cea66 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 146 1.6E-14 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 BUMPUSDA_RS02680 be56859b5287bd2474734abee86cea66 394 SUPERFAMILY SSF50447 205 301 6.87E-30 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain BUMPUSDA_RS02680 be56859b5287bd2474734abee86cea66 394 PANTHER PTHR23115 1 392 2.9E-295 T 23-04-2016 BUMPUSDA_RS02680 be56859b5287bd2474734abee86cea66 394 Gene3D G3DSA:2.40.30.10 209 298 2.1E-36 T 23-04-2016 BUMPUSDA_RS02680 be56859b5287bd2474734abee86cea66 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 1.5E-16 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 BUMPUSDA_RS02680 be56859b5287bd2474734abee86cea66 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 2.0E-32 T 23-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal BUMPUSDA_RS02680 be56859b5287bd2474734abee86cea66 394 SUPERFAMILY SSF52540 9 226 1.07E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02680 be56859b5287bd2474734abee86cea66 394 Gene3D G3DSA:3.40.50.300 3 208 3.7E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02680 be56859b5287bd2474734abee86cea66 394 SUPERFAMILY SSF50465 298 392 2.56E-35 T 23-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal BUMPUSDA_RS01300 f600ba5b6c2c42a3d27fb1c5e2e65282 289 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 11 31 1.1E-6 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 BUMPUSDA_RS01300 f600ba5b6c2c42a3d27fb1c5e2e65282 289 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 78 96 1.1E-6 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 BUMPUSDA_RS01300 f600ba5b6c2c42a3d27fb1c5e2e65282 289 Gene3D G3DSA:3.40.50.300 10 191 1.7E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01300 f600ba5b6c2c42a3d27fb1c5e2e65282 289 PANTHER PTHR11649:SF3 8 284 9.2E-76 T 23-04-2016 BUMPUSDA_RS01300 f600ba5b6c2c42a3d27fb1c5e2e65282 289 SUPERFAMILY SSF52540 11 180 3.14E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01300 f600ba5b6c2c42a3d27fb1c5e2e65282 289 SUPERFAMILY SSF54814 182 284 6.54E-24 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 BUMPUSDA_RS01300 f600ba5b6c2c42a3d27fb1c5e2e65282 289 Hamap MF_00367 GTPase Era [era]. 6 288 26.464 T 23-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 BUMPUSDA_RS01300 f600ba5b6c2c42a3d27fb1c5e2e65282 289 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 169 1.5E-21 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 BUMPUSDA_RS01300 f600ba5b6c2c42a3d27fb1c5e2e65282 289 Pfam PF01926 50S ribosome-binding GTPase 11 124 2.8E-20 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 BUMPUSDA_RS01300 f600ba5b6c2c42a3d27fb1c5e2e65282 289 Pfam PF07650 KH domain 218 282 6.2E-8 T 23-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 BUMPUSDA_RS01300 f600ba5b6c2c42a3d27fb1c5e2e65282 289 PANTHER PTHR11649 8 284 9.2E-76 T 23-04-2016 BUMPUSDA_RS01300 f600ba5b6c2c42a3d27fb1c5e2e65282 289 TIGRFAM TIGR00436 era: GTP-binding protein Era 9 284 2.5E-72 T 23-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 BUMPUSDA_RS01300 f600ba5b6c2c42a3d27fb1c5e2e65282 289 Gene3D G3DSA:3.30.300.20 192 285 1.8E-22 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta BUMPUSDA_RS02735 dd61e36ae8a8790d80e7c469e8ee574f 228 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 BUMPUSDA_RS02735 dd61e36ae8a8790d80e7c469e8ee574f 228 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 BUMPUSDA_RS02735 dd61e36ae8a8790d80e7c469e8ee574f 228 Gene3D G3DSA:3.20.20.70 1 224 1.9E-84 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 BUMPUSDA_RS02735 dd61e36ae8a8790d80e7c469e8ee574f 228 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 8.3E-84 T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 BUMPUSDA_RS02735 dd61e36ae8a8790d80e7c469e8ee574f 228 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 6 216 1.6E-91 T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 BUMPUSDA_RS02735 dd61e36ae8a8790d80e7c469e8ee574f 228 SUPERFAMILY SSF51366 1 219 4.18E-68 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 BUMPUSDA_RS02735 dd61e36ae8a8790d80e7c469e8ee574f 228 PANTHER PTHR11749:SF7 2 222 6.3E-113 T 23-04-2016 BUMPUSDA_RS02735 dd61e36ae8a8790d80e7c469e8ee574f 228 PANTHER PTHR11749 2 222 6.3E-113 T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 BUMPUSDA_RS02735 dd61e36ae8a8790d80e7c469e8ee574f 228 PIRSF PIRSF001461 1 228 1.5E-100 T 23-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 BUMPUSDA_RS02530 d5de4016fe25b05208ba85af0a1ac9a6 170 Pfam PF01327 Polypeptide deformylase 5 151 7.8E-48 T 23-04-2016 IPR023635 Peptide deformylase BUMPUSDA_RS02530 d5de4016fe25b05208ba85af0a1ac9a6 170 Hamap MF_00163 Peptide deformylase [def]. 2 162 28.47 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 BUMPUSDA_RS02530 d5de4016fe25b05208ba85af0a1ac9a6 170 PANTHER PTHR10458 1 168 4.6E-71 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 BUMPUSDA_RS02530 d5de4016fe25b05208ba85af0a1ac9a6 170 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 5.4E-56 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 BUMPUSDA_RS02530 d5de4016fe25b05208ba85af0a1ac9a6 170 Gene3D G3DSA:3.90.45.10 5 167 5.3E-58 T 23-04-2016 IPR023635 Peptide deformylase BUMPUSDA_RS02530 d5de4016fe25b05208ba85af0a1ac9a6 170 PRINTS PR01576 Peptide deformylase signature 101 119 1.5E-33 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 BUMPUSDA_RS02530 d5de4016fe25b05208ba85af0a1ac9a6 170 PRINTS PR01576 Peptide deformylase signature 89 100 1.5E-33 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 BUMPUSDA_RS02530 d5de4016fe25b05208ba85af0a1ac9a6 170 PRINTS PR01576 Peptide deformylase signature 33 62 1.5E-33 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 BUMPUSDA_RS02530 d5de4016fe25b05208ba85af0a1ac9a6 170 PRINTS PR01576 Peptide deformylase signature 120 149 1.5E-33 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 BUMPUSDA_RS02530 d5de4016fe25b05208ba85af0a1ac9a6 170 SUPERFAMILY SSF56420 3 163 5.1E-56 T 23-04-2016 IPR023635 Peptide deformylase BUMPUSDA_RS02530 d5de4016fe25b05208ba85af0a1ac9a6 170 PANTHER PTHR10458:SF10 1 168 4.6E-71 T 23-04-2016 BUMPUSDA_RS02530 d5de4016fe25b05208ba85af0a1ac9a6 170 PIRSF PIRSF004749 1 170 5.6E-48 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 BUMPUSDA_RS03080 7fc170a4df713e07e2936cac01e514b1 126 Pfam PF01592 NifU-like N terminal domain 2 125 4.3E-55 T 23-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 BUMPUSDA_RS03080 7fc170a4df713e07e2936cac01e514b1 126 PANTHER PTHR10093 1 125 3.3E-93 T 23-04-2016 BUMPUSDA_RS03080 7fc170a4df713e07e2936cac01e514b1 126 SUPERFAMILY SSF82649 1 125 1.31E-47 T 23-04-2016 BUMPUSDA_RS03080 7fc170a4df713e07e2936cac01e514b1 126 PANTHER PTHR10093:SF3 1 125 3.3E-93 T 23-04-2016 BUMPUSDA_RS03080 7fc170a4df713e07e2936cac01e514b1 126 Gene3D G3DSA:3.90.1010.10 2 125 1.7E-54 T 23-04-2016 BUMPUSDA_RS03080 7fc170a4df713e07e2936cac01e514b1 126 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 126 1.4E-69 T 23-04-2016 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 BUMPUSDA_RS00015 c70d3c59912ddd68fad286c88ec590b5 79 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 77 14.089 T 23-04-2016 BUMPUSDA_RS00015 c70d3c59912ddd68fad286c88ec590b5 79 PRINTS PR00124 ATP synthase C subunit signature 50 75 1.3E-7 T 23-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 BUMPUSDA_RS00015 c70d3c59912ddd68fad286c88ec590b5 79 PRINTS PR00124 ATP synthase C subunit signature 12 31 1.3E-7 T 23-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 BUMPUSDA_RS00015 c70d3c59912ddd68fad286c88ec590b5 79 PRINTS PR00124 ATP synthase C subunit signature 33 48 1.3E-7 T 23-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 BUMPUSDA_RS00015 c70d3c59912ddd68fad286c88ec590b5 79 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 77 2.0E-31 T 23-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 BUMPUSDA_RS00015 c70d3c59912ddd68fad286c88ec590b5 79 Gene3D G3DSA:1.20.20.10 4 77 4.7E-30 T 23-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 BUMPUSDA_RS00015 c70d3c59912ddd68fad286c88ec590b5 79 ProSitePatterns PS00605 ATP synthase c subunit signature. 40 61 - T 23-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site BUMPUSDA_RS00015 c70d3c59912ddd68fad286c88ec590b5 79 SUPERFAMILY SSF81333 4 77 1.1E-17 T 23-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 BUMPUSDA_RS00015 c70d3c59912ddd68fad286c88ec590b5 79 PANTHER PTHR10031 10 78 2.1E-21 T 23-04-2016 BUMPUSDA_RS00015 c70d3c59912ddd68fad286c88ec590b5 79 Pfam PF00137 ATP synthase subunit C 11 72 5.1E-9 T 23-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 BUMPUSDA_RS00785 89e845177f87e37bc688019efe7aaf36 600 SUPERFAMILY SSF143243 26 229 1.31E-49 T 23-04-2016 BUMPUSDA_RS00785 89e845177f87e37bc688019efe7aaf36 600 Hamap MF_01359 NADH-quinone oxidoreductase subunit C/D [nuoC]. 16 600 67.735 T 23-04-2016 IPR023062 NADH dehydrogenase, subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 BUMPUSDA_RS00785 89e845177f87e37bc688019efe7aaf36 600 PANTHER PTHR11993 147 595 2.3E-272 T 23-04-2016 BUMPUSDA_RS00785 89e845177f87e37bc688019efe7aaf36 600 Gene3D G3DSA:1.10.645.10 217 431 1.1E-35 T 23-04-2016 IPR029014 NiFe hydrogenase-like BUMPUSDA_RS00785 89e845177f87e37bc688019efe7aaf36 600 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 105 159 9.0E-21 T 23-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 BUMPUSDA_RS00785 89e845177f87e37bc688019efe7aaf36 600 SUPERFAMILY SSF56762 225 600 8.63E-117 T 23-04-2016 IPR029014 NiFe hydrogenase-like BUMPUSDA_RS00785 89e845177f87e37bc688019efe7aaf36 600 Gene3D G3DSA:1.10.645.10 432 582 3.0E-11 T 23-04-2016 IPR029014 NiFe hydrogenase-like BUMPUSDA_RS00785 89e845177f87e37bc688019efe7aaf36 600 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 57 177 9.0E-33 T 23-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 BUMPUSDA_RS00785 89e845177f87e37bc688019efe7aaf36 600 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 210 600 41.389 T 23-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 BUMPUSDA_RS00785 89e845177f87e37bc688019efe7aaf36 600 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 252 263 - T 23-04-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 BUMPUSDA_RS00785 89e845177f87e37bc688019efe7aaf36 600 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 51 176 2.0E-37 T 23-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 BUMPUSDA_RS00785 89e845177f87e37bc688019efe7aaf36 600 PANTHER PTHR11993:SF28 147 595 2.3E-272 T 23-04-2016 BUMPUSDA_RS00785 89e845177f87e37bc688019efe7aaf36 600 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 329 600 2.9E-100 T 23-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 BUMPUSDA_RS00785 89e845177f87e37bc688019efe7aaf36 600 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 215 600 2.9E-167 T 23-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 BUMPUSDA_RS00990 6515e8dacb76dd36cf85444e2bd4e1c4 284 Gene3D G3DSA:3.40.50.620 1 175 8.2E-66 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BUMPUSDA_RS00990 6515e8dacb76dd36cf85444e2bd4e1c4 284 PANTHER PTHR21299 1 284 3.2E-103 T 23-04-2016 BUMPUSDA_RS00990 6515e8dacb76dd36cf85444e2bd4e1c4 284 Gene3D G3DSA:3.30.1300.10 181 280 1.5E-19 T 23-04-2016 BUMPUSDA_RS00990 6515e8dacb76dd36cf85444e2bd4e1c4 284 Hamap MF_00158 Pantothenate synthetase [panC]. 2 281 35.651 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 BUMPUSDA_RS00990 6515e8dacb76dd36cf85444e2bd4e1c4 284 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 7.9E-90 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 BUMPUSDA_RS00990 6515e8dacb76dd36cf85444e2bd4e1c4 284 SUPERFAMILY SSF52374 1 281 2.94E-91 T 23-04-2016 BUMPUSDA_RS00990 6515e8dacb76dd36cf85444e2bd4e1c4 284 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 281 9.1E-91 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 BUMPUSDA_RS00990 6515e8dacb76dd36cf85444e2bd4e1c4 284 PANTHER PTHR21299:SF1 1 284 3.2E-103 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 BUMPUSDA_RS02580 51b8e6ec85b6cb6cf5bd748d31dfaf32 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 1.5E-21 T 23-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 BUMPUSDA_RS02580 51b8e6ec85b6cb6cf5bd748d31dfaf32 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 19.5 T 23-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 BUMPUSDA_RS02580 51b8e6ec85b6cb6cf5bd748d31dfaf32 59 Pfam PF00327 Ribosomal protein L30p/L7e 4 52 2.0E-16 T 23-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain BUMPUSDA_RS02580 51b8e6ec85b6cb6cf5bd748d31dfaf32 59 Gene3D G3DSA:3.30.1390.20 1 58 7.0E-25 T 23-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain BUMPUSDA_RS02580 51b8e6ec85b6cb6cf5bd748d31dfaf32 59 PIRSF PIRSF002211 1 59 1.6E-22 T 23-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 BUMPUSDA_RS02580 51b8e6ec85b6cb6cf5bd748d31dfaf32 59 PANTHER PTHR15892 1 59 1.5E-20 T 23-04-2016 BUMPUSDA_RS02580 51b8e6ec85b6cb6cf5bd748d31dfaf32 59 SUPERFAMILY SSF55129 1 58 9.29E-18 T 23-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain BUMPUSDA_RS02160 03fa752ff7c41503bb606a2893196702 302 SUPERFAMILY SSF52402 5 210 3.45E-69 T 23-04-2016 BUMPUSDA_RS02160 03fa752ff7c41503bb606a2893196702 302 Gene3D G3DSA:3.40.50.620 4 210 1.3E-59 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BUMPUSDA_RS02160 03fa752ff7c41503bb606a2893196702 302 Gene3D G3DSA:3.40.50.620 244 253 1.3E-59 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BUMPUSDA_RS02160 03fa752ff7c41503bb606a2893196702 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 5.5E-61 T 23-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 BUMPUSDA_RS02160 03fa752ff7c41503bb606a2893196702 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 1.7E-162 T 23-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 BUMPUSDA_RS02160 03fa752ff7c41503bb606a2893196702 302 PANTHER PTHR23293 178 211 3.1E-86 T 23-04-2016 BUMPUSDA_RS02160 03fa752ff7c41503bb606a2893196702 302 PANTHER PTHR23293 245 302 3.1E-86 T 23-04-2016 BUMPUSDA_RS02160 03fa752ff7c41503bb606a2893196702 302 PANTHER PTHR23293 5 158 3.1E-86 T 23-04-2016 BUMPUSDA_RS02160 03fa752ff7c41503bb606a2893196702 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 53.765 T 23-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 BUMPUSDA_RS02160 03fa752ff7c41503bb606a2893196702 302 PIRSF PIRSF002936 1 302 1.2E-148 T 23-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 BUMPUSDA_RS02160 03fa752ff7c41503bb606a2893196702 302 PANTHER PTHR23293:SF6 178 211 3.1E-86 T 23-04-2016 BUMPUSDA_RS02160 03fa752ff7c41503bb606a2893196702 302 PANTHER PTHR23293:SF6 245 302 3.1E-86 T 23-04-2016 BUMPUSDA_RS02160 03fa752ff7c41503bb606a2893196702 302 PANTHER PTHR23293:SF6 5 158 3.1E-86 T 23-04-2016 BUMPUSDA_RS02300 ac60293f7d442997bfa0adabe39f3230 281 Gene3D G3DSA:3.30.70.100 182 266 7.8E-25 T 23-04-2016 BUMPUSDA_RS02300 ac60293f7d442997bfa0adabe39f3230 281 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 143 177 - T 23-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 BUMPUSDA_RS02300 ac60293f7d442997bfa0adabe39f3230 281 PANTHER PTHR30221 16 277 1.4E-97 T 23-04-2016 BUMPUSDA_RS02300 ac60293f7d442997bfa0adabe39f3230 281 Pfam PF00924 Mechanosensitive ion channel 72 268 2.0E-54 T 23-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 BUMPUSDA_RS02300 ac60293f7d442997bfa0adabe39f3230 281 SUPERFAMILY SSF82689 181 279 1.57E-29 T 23-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 BUMPUSDA_RS02300 ac60293f7d442997bfa0adabe39f3230 281 Gene3D G3DSA:2.30.30.60 129 178 4.8E-19 T 23-04-2016 BUMPUSDA_RS02300 ac60293f7d442997bfa0adabe39f3230 281 SUPERFAMILY SSF50182 114 179 5.23E-18 T 23-04-2016 IPR010920 LSM domain BUMPUSDA_RS02300 ac60293f7d442997bfa0adabe39f3230 281 SUPERFAMILY SSF82861 27 112 2.35E-16 T 23-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 BUMPUSDA_RS02300 ac60293f7d442997bfa0adabe39f3230 281 Pfam PF05552 Conserved TM helix 15 64 1.1E-11 T 23-04-2016 IPR008910 Conserved TM helix BUMPUSDA_RS02300 ac60293f7d442997bfa0adabe39f3230 281 PANTHER PTHR30221:SF7 16 277 1.4E-97 T 23-04-2016 BUMPUSDA_RS00235 d2d42c1c24498f716c73fdca67aafa0c 292 SUPERFAMILY SSF51730 23 291 5.1E-84 T 23-04-2016 IPR029041 FAD-linked oxidoreductase-like BUMPUSDA_RS00235 d2d42c1c24498f716c73fdca67aafa0c 292 PANTHER PTHR21091:SF31 149 279 3.4E-32 T 23-04-2016 BUMPUSDA_RS00235 d2d42c1c24498f716c73fdca67aafa0c 292 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 26 290 4.8E-96 T 23-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 BUMPUSDA_RS00235 d2d42c1c24498f716c73fdca67aafa0c 292 Gene3D G3DSA:3.20.20.220 20 291 1.5E-89 T 23-04-2016 IPR029041 FAD-linked oxidoreductase-like BUMPUSDA_RS00235 d2d42c1c24498f716c73fdca67aafa0c 292 PANTHER PTHR21091 149 279 3.4E-32 T 23-04-2016 BUMPUSDA_RS00235 d2d42c1c24498f716c73fdca67aafa0c 292 Pfam PF02219 Methylenetetrahydrofolate reductase 20 290 6.8E-93 T 23-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 BUMPUSDA_RS00735 c8cf825f212ca0b358cad457fa4bb326 269 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 6 266 8.4E-91 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 BUMPUSDA_RS00735 c8cf825f212ca0b358cad457fa4bb326 269 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 127 7.7E-37 T 23-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 BUMPUSDA_RS00735 c8cf825f212ca0b358cad457fa4bb326 269 PANTHER PTHR20836 6 266 6.2E-76 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 BUMPUSDA_RS00735 c8cf825f212ca0b358cad457fa4bb326 269 Gene3D G3DSA:3.40.50.720 5 165 1.3E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain BUMPUSDA_RS00735 c8cf825f212ca0b358cad457fa4bb326 269 PIRSF PIRSF000161 3 269 1.8E-81 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 BUMPUSDA_RS00735 c8cf825f212ca0b358cad457fa4bb326 269 SUPERFAMILY SSF55347 129 238 4.58E-33 T 23-04-2016 BUMPUSDA_RS00735 c8cf825f212ca0b358cad457fa4bb326 269 PANTHER PTHR20836:SF0 6 266 6.2E-76 T 23-04-2016 BUMPUSDA_RS00735 c8cf825f212ca0b358cad457fa4bb326 269 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 130 266 1.8E-40 T 23-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 BUMPUSDA_RS00735 c8cf825f212ca0b358cad457fa4bb326 269 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 152 169 - T 23-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 BUMPUSDA_RS00735 c8cf825f212ca0b358cad457fa4bb326 269 SUPERFAMILY SSF51735 4 128 3.6E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain BUMPUSDA_RS00735 c8cf825f212ca0b358cad457fa4bb326 269 SUPERFAMILY SSF51735 238 267 3.6E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain BUMPUSDA_RS00735 c8cf825f212ca0b358cad457fa4bb326 269 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 5 267 32.501 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 BUMPUSDA_RS01890 ad937f992ab48769ca182f74c32d9dc4 596 PANTHER PTHR24031 7 469 3.0E-239 T 23-04-2016 BUMPUSDA_RS01890 ad937f992ab48769ca182f74c32d9dc4 596 PANTHER PTHR24031 517 595 3.0E-239 T 23-04-2016 BUMPUSDA_RS01890 ad937f992ab48769ca182f74c32d9dc4 596 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 23-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BUMPUSDA_RS01890 ad937f992ab48769ca182f74c32d9dc4 596 SUPERFAMILY SSF52540 5 209 3.23E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01890 ad937f992ab48769ca182f74c32d9dc4 596 SMART SM00490 258 339 2.0E-32 T 23-04-2016 IPR001650 Helicase, C-terminal BUMPUSDA_RS01890 ad937f992ab48769ca182f74c32d9dc4 596 Pfam PF00270 DEAD/DEAH box helicase 31 195 6.9E-52 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BUMPUSDA_RS01890 ad937f992ab48769ca182f74c32d9dc4 596 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 545 45.934 T 23-04-2016 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 BUMPUSDA_RS01890 ad937f992ab48769ca182f74c32d9dc4 596 Gene3D G3DSA:3.40.50.300 208 372 4.0E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01890 ad937f992ab48769ca182f74c32d9dc4 596 SUPERFAMILY SSF52540 43 99 3.78E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01890 ad937f992ab48769ca182f74c32d9dc4 596 SUPERFAMILY SSF52540 257 382 3.78E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01890 ad937f992ab48769ca182f74c32d9dc4 596 Gene3D G3DSA:3.40.50.300 6 207 2.9E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01890 ad937f992ab48769ca182f74c32d9dc4 596 PANTHER PTHR24031:SF261 7 469 3.0E-239 T 23-04-2016 BUMPUSDA_RS01890 ad937f992ab48769ca182f74c32d9dc4 596 PANTHER PTHR24031:SF261 517 595 3.0E-239 T 23-04-2016 BUMPUSDA_RS01890 ad937f992ab48769ca182f74c32d9dc4 596 SMART SM00487 25 223 1.3E-63 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain BUMPUSDA_RS01890 ad937f992ab48769ca182f74c32d9dc4 596 Pfam PF03880 DbpA RNA binding domain 474 543 5.6E-20 T 23-04-2016 IPR005580 DbpA, RNA-binding domain BUMPUSDA_RS01890 ad937f992ab48769ca182f74c32d9dc4 596 Pfam PF00271 Helicase conserved C-terminal domain 231 339 1.7E-29 T 23-04-2016 IPR001650 Helicase, C-terminal BUMPUSDA_RS01690 034691e107c5698a6a4e6914199e4396 351 Gene3D G3DSA:2.40.160.20 11 208 2.9E-34 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 BUMPUSDA_RS01690 034691e107c5698a6a4e6914199e4396 351 SUPERFAMILY SSF56925 23 207 1.18E-26 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 BUMPUSDA_RS01690 034691e107c5698a6a4e6914199e4396 351 PRINTS PR01022 Outer membrane protein A signature 222 237 8.7E-14 T 23-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 BUMPUSDA_RS01690 034691e107c5698a6a4e6914199e4396 351 PRINTS PR01022 Outer membrane protein A signature 117 133 8.7E-14 T 23-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 BUMPUSDA_RS01690 034691e107c5698a6a4e6914199e4396 351 PRINTS PR01022 Outer membrane protein A signature 251 270 8.7E-14 T 23-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 BUMPUSDA_RS01690 034691e107c5698a6a4e6914199e4396 351 PRINTS PR01022 Outer membrane protein A signature 290 309 8.7E-14 T 23-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 BUMPUSDA_RS01690 034691e107c5698a6a4e6914199e4396 351 PRINTS PR01022 Outer membrane protein A signature 324 337 8.7E-14 T 23-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 BUMPUSDA_RS01690 034691e107c5698a6a4e6914199e4396 351 Gene3D G3DSA:3.30.1330.60 226 346 3.5E-28 T 23-04-2016 IPR006665 OmpA-like domain BUMPUSDA_RS01690 034691e107c5698a6a4e6914199e4396 351 SUPERFAMILY SSF103088 223 345 3.01E-27 T 23-04-2016 IPR006665 OmpA-like domain BUMPUSDA_RS01690 034691e107c5698a6a4e6914199e4396 351 PANTHER PTHR30128 1 351 4.5E-34 T 23-04-2016 BUMPUSDA_RS01690 034691e107c5698a6a4e6914199e4396 351 PRINTS PR01021 OMPA domain signature 281 297 3.5E-13 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BUMPUSDA_RS01690 034691e107c5698a6a4e6914199e4396 351 PRINTS PR01021 OMPA domain signature 266 281 3.5E-13 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BUMPUSDA_RS01690 034691e107c5698a6a4e6914199e4396 351 PRINTS PR01021 OMPA domain signature 234 256 3.5E-13 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 BUMPUSDA_RS01690 034691e107c5698a6a4e6914199e4396 351 Pfam PF01389 OmpA-like transmembrane domain 23 207 2.1E-26 T 23-04-2016 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 BUMPUSDA_RS01690 034691e107c5698a6a4e6914199e4396 351 Pfam PF00691 OmpA family 233 319 5.9E-19 T 23-04-2016 IPR006665 OmpA-like domain BUMPUSDA_RS01690 034691e107c5698a6a4e6914199e4396 351 PANTHER PTHR30128:SF16 1 351 4.5E-34 T 23-04-2016 BUMPUSDA_RS00130 6f6975c281111793a94d8adb2ae4f334 285 Gene3D G3DSA:1.10.10.10 225 281 1.1E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain BUMPUSDA_RS00130 6f6975c281111793a94d8adb2ae4f334 285 SUPERFAMILY SSF88946 14 122 5.97E-36 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BUMPUSDA_RS00130 6f6975c281111793a94d8adb2ae4f334 285 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 281 3.3E-32 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BUMPUSDA_RS00130 6f6975c281111793a94d8adb2ae4f334 285 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 14 284 4.6E-124 T 23-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 BUMPUSDA_RS00130 6f6975c281111793a94d8adb2ae4f334 285 PANTHER PTHR30376 2 284 7.5E-111 T 23-04-2016 BUMPUSDA_RS00130 6f6975c281111793a94d8adb2ae4f334 285 Pfam PF04542 Sigma-70 region 2 53 122 2.4E-15 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BUMPUSDA_RS00130 6f6975c281111793a94d8adb2ae4f334 285 PRINTS PR00046 Major sigma-70 factor signature 253 268 3.1E-17 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BUMPUSDA_RS00130 6f6975c281111793a94d8adb2ae4f334 285 PRINTS PR00046 Major sigma-70 factor signature 233 245 3.1E-17 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BUMPUSDA_RS00130 6f6975c281111793a94d8adb2ae4f334 285 PRINTS PR00046 Major sigma-70 factor signature 268 279 3.1E-17 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BUMPUSDA_RS00130 6f6975c281111793a94d8adb2ae4f334 285 PRINTS PR00046 Major sigma-70 factor signature 77 90 3.1E-17 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BUMPUSDA_RS00130 6f6975c281111793a94d8adb2ae4f334 285 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BUMPUSDA_RS00130 6f6975c281111793a94d8adb2ae4f334 285 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 4 285 50.24 T 23-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 BUMPUSDA_RS00130 6f6975c281111793a94d8adb2ae4f334 285 SUPERFAMILY SSF88659 194 284 2.99E-16 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BUMPUSDA_RS00130 6f6975c281111793a94d8adb2ae4f334 285 Gene3D G3DSA:1.10.601.10 17 122 6.3E-31 T 23-04-2016 BUMPUSDA_RS00130 6f6975c281111793a94d8adb2ae4f334 285 Pfam PF04545 Sigma-70, region 4 229 280 2.5E-14 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BUMPUSDA_RS01045 b2286c0ec26c85142dfc072acf3b55f4 473 SUPERFAMILY SSF55424 345 465 7.73E-39 T 23-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 BUMPUSDA_RS01045 b2286c0ec26c85142dfc072acf3b55f4 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.0E-70 T 23-04-2016 BUMPUSDA_RS01045 b2286c0ec26c85142dfc072acf3b55f4 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 1.0E-70 T 23-04-2016 BUMPUSDA_RS01045 b2286c0ec26c85142dfc072acf3b55f4 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 1.0E-70 T 23-04-2016 BUMPUSDA_RS01045 b2286c0ec26c85142dfc072acf3b55f4 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 1.0E-70 T 23-04-2016 BUMPUSDA_RS01045 b2286c0ec26c85142dfc072acf3b55f4 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 1.0E-70 T 23-04-2016 BUMPUSDA_RS01045 b2286c0ec26c85142dfc072acf3b55f4 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 1.0E-70 T 23-04-2016 BUMPUSDA_RS01045 b2286c0ec26c85142dfc072acf3b55f4 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 1.0E-70 T 23-04-2016 BUMPUSDA_RS01045 b2286c0ec26c85142dfc072acf3b55f4 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 1.0E-70 T 23-04-2016 BUMPUSDA_RS01045 b2286c0ec26c85142dfc072acf3b55f4 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 1.0E-70 T 23-04-2016 BUMPUSDA_RS01045 b2286c0ec26c85142dfc072acf3b55f4 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 7.1E-40 T 23-04-2016 BUMPUSDA_RS01045 b2286c0ec26c85142dfc072acf3b55f4 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 7.1E-40 T 23-04-2016 BUMPUSDA_RS01045 b2286c0ec26c85142dfc072acf3b55f4 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 7.1E-40 T 23-04-2016 BUMPUSDA_RS01045 b2286c0ec26c85142dfc072acf3b55f4 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 7.1E-40 T 23-04-2016 BUMPUSDA_RS01045 b2286c0ec26c85142dfc072acf3b55f4 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 7.1E-40 T 23-04-2016 BUMPUSDA_RS01045 b2286c0ec26c85142dfc072acf3b55f4 473 Gene3D G3DSA:3.50.50.60 259 340 2.4E-25 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BUMPUSDA_RS01045 b2286c0ec26c85142dfc072acf3b55f4 473 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 452 6.6E-34 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 BUMPUSDA_RS01045 b2286c0ec26c85142dfc072acf3b55f4 473 Gene3D G3DSA:3.50.50.60 152 258 2.0E-29 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BUMPUSDA_RS01045 b2286c0ec26c85142dfc072acf3b55f4 473 PIRSF PIRSF000350 1 468 9.7E-90 T 23-04-2016 BUMPUSDA_RS01045 b2286c0ec26c85142dfc072acf3b55f4 473 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 23-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 BUMPUSDA_RS01045 b2286c0ec26c85142dfc072acf3b55f4 473 PANTHER PTHR22912 1 459 1.3E-210 T 23-04-2016 BUMPUSDA_RS01045 b2286c0ec26c85142dfc072acf3b55f4 473 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 7 458 3.6E-149 T 23-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 BUMPUSDA_RS01045 b2286c0ec26c85142dfc072acf3b55f4 473 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 1.1E-59 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BUMPUSDA_RS01045 b2286c0ec26c85142dfc072acf3b55f4 473 SUPERFAMILY SSF51905 1 322 1.99E-56 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BUMPUSDA_RS01045 b2286c0ec26c85142dfc072acf3b55f4 473 Gene3D G3DSA:3.30.390.30 343 459 1.8E-43 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 BUMPUSDA_RS01045 b2286c0ec26c85142dfc072acf3b55f4 473 Gene3D G3DSA:3.50.50.60 6 149 2.1E-37 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BUMPUSDA_RS01045 b2286c0ec26c85142dfc072acf3b55f4 473 PANTHER PTHR22912:SF160 1 459 1.3E-210 T 23-04-2016 BUMPUSDA_RS02465 f95c5646e3f0ebf105440a5cd6c060d7 625 PANTHER PTHR11528 4 622 1.1E-294 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 BUMPUSDA_RS02465 f95c5646e3f0ebf105440a5cd6c060d7 625 SMART SM00387 29 186 4.5E-5 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain BUMPUSDA_RS02465 f95c5646e3f0ebf105440a5cd6c060d7 625 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 185 4.3E-13 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain BUMPUSDA_RS02465 f95c5646e3f0ebf105440a5cd6c060d7 625 SUPERFAMILY SSF55874 7 213 6.02E-63 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain BUMPUSDA_RS02465 f95c5646e3f0ebf105440a5cd6c060d7 625 PRINTS PR00775 90kDa heat shock protein signature 28 50 2.7E-61 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal BUMPUSDA_RS02465 f95c5646e3f0ebf105440a5cd6c060d7 625 PRINTS PR00775 90kDa heat shock protein signature 95 112 2.7E-61 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal BUMPUSDA_RS02465 f95c5646e3f0ebf105440a5cd6c060d7 625 PRINTS PR00775 90kDa heat shock protein signature 174 191 2.7E-61 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal BUMPUSDA_RS02465 f95c5646e3f0ebf105440a5cd6c060d7 625 PRINTS PR00775 90kDa heat shock protein signature 77 94 2.7E-61 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal BUMPUSDA_RS02465 f95c5646e3f0ebf105440a5cd6c060d7 625 PRINTS PR00775 90kDa heat shock protein signature 192 210 2.7E-61 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal BUMPUSDA_RS02465 f95c5646e3f0ebf105440a5cd6c060d7 625 PRINTS PR00775 90kDa heat shock protein signature 7 27 2.7E-61 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal BUMPUSDA_RS02465 f95c5646e3f0ebf105440a5cd6c060d7 625 PRINTS PR00775 90kDa heat shock protein signature 122 144 2.7E-61 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal BUMPUSDA_RS02465 f95c5646e3f0ebf105440a5cd6c060d7 625 PANTHER PTHR11528:SF44 4 622 1.1E-294 T 23-04-2016 BUMPUSDA_RS02465 f95c5646e3f0ebf105440a5cd6c060d7 625 Gene3D G3DSA:3.30.565.10 8 236 6.0E-78 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain BUMPUSDA_RS02465 f95c5646e3f0ebf105440a5cd6c060d7 625 PIRSF PIRSF002583 1 624 5.4E-206 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 BUMPUSDA_RS02465 f95c5646e3f0ebf105440a5cd6c060d7 625 Hamap MF_00505 Chaperone protein HtpG [htpG]. 4 623 30.822 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 BUMPUSDA_RS02465 f95c5646e3f0ebf105440a5cd6c060d7 625 SUPERFAMILY SSF54211 229 486 1.21E-92 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold BUMPUSDA_RS02465 f95c5646e3f0ebf105440a5cd6c060d7 625 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 27 36 - T 23-04-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 BUMPUSDA_RS02465 f95c5646e3f0ebf105440a5cd6c060d7 625 Pfam PF00183 Hsp90 protein 218 622 1.2E-118 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 BUMPUSDA_RS02465 f95c5646e3f0ebf105440a5cd6c060d7 625 SUPERFAMILY SSF110942 510 622 1.44E-35 T 23-04-2016 BUMPUSDA_RS02830 b374eed3a6ac7b4e332011dfe3a873da 487 PIRSF PIRSF000977 9 480 1.2E-183 T 23-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 BUMPUSDA_RS02830 b374eed3a6ac7b4e332011dfe3a873da 487 SUPERFAMILY SSF53098 16 474 2.64E-111 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 BUMPUSDA_RS02830 b374eed3a6ac7b4e332011dfe3a873da 487 Gene3D G3DSA:3.30.420.10 9 206 6.5E-79 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 BUMPUSDA_RS02830 b374eed3a6ac7b4e332011dfe3a873da 487 PANTHER PTHR11046:SF2 7 471 3.3E-171 T 23-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 BUMPUSDA_RS02830 b374eed3a6ac7b4e332011dfe3a873da 487 Pfam PF08411 Exonuclease C-terminal 218 472 3.7E-62 T 23-04-2016 IPR013620 Exonuclease C-terminal GO:0006281|GO:0008852 BUMPUSDA_RS02830 b374eed3a6ac7b4e332011dfe3a873da 487 SMART SM00479 16 209 0.008 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III BUMPUSDA_RS02830 b374eed3a6ac7b4e332011dfe3a873da 487 Pfam PF00929 Exonuclease 19 199 1.1E-22 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III BUMPUSDA_RS02830 b374eed3a6ac7b4e332011dfe3a873da 487 PANTHER PTHR11046 7 471 3.3E-171 T 23-04-2016 BUMPUSDA_RS02785 3df4537025f8b1f55df6c5bdf2f4fa7f 465 Pfam PF00772 DnaB-like helicase N terminal domain 23 124 2.0E-35 T 23-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 BUMPUSDA_RS02785 3df4537025f8b1f55df6c5bdf2f4fa7f 465 Gene3D G3DSA:3.40.50.300 196 459 2.6E-101 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02785 3df4537025f8b1f55df6c5bdf2f4fa7f 465 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 23 459 4.7E-170 T 23-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 BUMPUSDA_RS02785 3df4537025f8b1f55df6c5bdf2f4fa7f 465 SMART SM00382 219 425 8.0E-5 T 23-04-2016 IPR003593 AAA+ ATPase domain BUMPUSDA_RS02785 3df4537025f8b1f55df6c5bdf2f4fa7f 465 SUPERFAMILY SSF52540 200 451 6.12E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02785 3df4537025f8b1f55df6c5bdf2f4fa7f 465 Pfam PF03796 DnaB-like helicase C terminal domain 202 458 7.7E-111 T 23-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 BUMPUSDA_RS02785 3df4537025f8b1f55df6c5bdf2f4fa7f 465 PANTHER PTHR30153 7 465 2.1E-214 T 23-04-2016 BUMPUSDA_RS02785 3df4537025f8b1f55df6c5bdf2f4fa7f 465 Gene3D G3DSA:1.10.860.10 23 125 7.6E-39 T 23-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal BUMPUSDA_RS02785 3df4537025f8b1f55df6c5bdf2f4fa7f 465 SUPERFAMILY SSF48024 21 132 4.71E-38 T 23-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 BUMPUSDA_RS00910 a3ff0e5b4d1c9c70daacda7570b9706d 829 Gene3D G3DSA:2.120.10.90 517 825 8.1E-133 T 23-04-2016 BUMPUSDA_RS00910 a3ff0e5b4d1c9c70daacda7570b9706d 829 SUPERFAMILY SSF56719 30 507 5.23E-175 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 BUMPUSDA_RS00910 a3ff0e5b4d1c9c70daacda7570b9706d 829 SUPERFAMILY SSF101904 519 827 1.57E-105 T 23-04-2016 BUMPUSDA_RS00910 a3ff0e5b4d1c9c70daacda7570b9706d 829 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 780 823 4.0E-11 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BUMPUSDA_RS00910 a3ff0e5b4d1c9c70daacda7570b9706d 829 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 524 570 4.8E-11 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BUMPUSDA_RS00910 a3ff0e5b4d1c9c70daacda7570b9706d 829 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 679 723 7.7E-14 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BUMPUSDA_RS00910 a3ff0e5b4d1c9c70daacda7570b9706d 829 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 574 623 9.5E-9 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BUMPUSDA_RS00910 a3ff0e5b4d1c9c70daacda7570b9706d 829 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 631 675 5.3E-4 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BUMPUSDA_RS00910 a3ff0e5b4d1c9c70daacda7570b9706d 829 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 729 774 1.5E-13 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BUMPUSDA_RS00910 a3ff0e5b4d1c9c70daacda7570b9706d 829 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 492 8.7E-149 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 BUMPUSDA_RS00910 a3ff0e5b4d1c9c70daacda7570b9706d 829 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 826 0.0 T 23-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BUMPUSDA_RS00910 a3ff0e5b4d1c9c70daacda7570b9706d 829 Gene3D G3DSA:3.90.199.10 334 399 1.9E-121 T 23-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 BUMPUSDA_RS00910 a3ff0e5b4d1c9c70daacda7570b9706d 829 Gene3D G3DSA:3.90.199.10 30 235 1.9E-121 T 23-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 BUMPUSDA_RS00910 a3ff0e5b4d1c9c70daacda7570b9706d 829 PANTHER PTHR10169 3 417 0.0 T 23-04-2016 BUMPUSDA_RS00910 a3ff0e5b4d1c9c70daacda7570b9706d 829 PANTHER PTHR10169 436 800 0.0 T 23-04-2016 BUMPUSDA_RS00910 a3ff0e5b4d1c9c70daacda7570b9706d 829 SMART SM00434 11 485 1.1E-264 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 BUMPUSDA_RS00910 a3ff0e5b4d1c9c70daacda7570b9706d 829 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 827 28.694 T 23-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BUMPUSDA_RS00910 a3ff0e5b4d1c9c70daacda7570b9706d 829 PANTHER PTHR10169:SF48 3 417 0.0 T 23-04-2016 BUMPUSDA_RS00910 a3ff0e5b4d1c9c70daacda7570b9706d 829 PANTHER PTHR10169:SF48 436 800 0.0 T 23-04-2016 BUMPUSDA_RS00910 a3ff0e5b4d1c9c70daacda7570b9706d 829 Gene3D G3DSA:3.30.1360.40 236 333 2.0E-36 T 23-04-2016 IPR024946 Arginine repressor C-terminal-like domain BUMPUSDA_RS01145 5a02c0a47a2596998ef6ec463460e589 334 PANTHER PTHR30040 16 334 2.6E-98 T 23-04-2016 BUMPUSDA_RS01145 5a02c0a47a2596998ef6ec463460e589 334 SUPERFAMILY SSF143631 22 330 6.54E-70 T 23-04-2016 IPR003374 ApbE-like domain BUMPUSDA_RS01145 5a02c0a47a2596998ef6ec463460e589 334 PIRSF PIRSF006268 1 332 4.0E-66 T 23-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 BUMPUSDA_RS01145 5a02c0a47a2596998ef6ec463460e589 334 Pfam PF02424 ApbE family 28 308 1.8E-60 T 23-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 BUMPUSDA_RS01145 5a02c0a47a2596998ef6ec463460e589 334 PANTHER PTHR30040:SF3 16 334 2.6E-98 T 23-04-2016 BUMPUSDA_RS02555 83316106ca06dac4f978e9fc23ecb0dd 130 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 130 32.473 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02555 83316106ca06dac4f978e9fc23ecb0dd 130 PANTHER PTHR11759 12 130 4.8E-72 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02555 83316106ca06dac4f978e9fc23ecb0dd 130 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 11 127 8.0E-55 T 23-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02555 83316106ca06dac4f978e9fc23ecb0dd 130 PIRSF PIRSF002131 1 130 3.8E-53 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02555 83316106ca06dac4f978e9fc23ecb0dd 130 Pfam PF00411 Ribosomal protein S11 20 129 7.0E-54 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02555 83316106ca06dac4f978e9fc23ecb0dd 130 SUPERFAMILY SSF53137 14 130 1.0E-47 T 23-04-2016 BUMPUSDA_RS02555 83316106ca06dac4f978e9fc23ecb0dd 130 ProSitePatterns PS00054 Ribosomal protein S11 signature. 98 120 - T 23-04-2016 IPR018102 Ribosomal S11, conserved site BUMPUSDA_RS02555 83316106ca06dac4f978e9fc23ecb0dd 130 Gene3D G3DSA:3.30.420.80 8 130 1.9E-53 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02815 efa50ef0bb88d7a0977f0a2287ac6962 350 SUPERFAMILY SSF48150 2 223 2.67E-66 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 BUMPUSDA_RS02815 efa50ef0bb88d7a0977f0a2287ac6962 350 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 23-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 BUMPUSDA_RS02815 efa50ef0bb88d7a0977f0a2287ac6962 350 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 6 275 8.6E-100 T 23-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 BUMPUSDA_RS02815 efa50ef0bb88d7a0977f0a2287ac6962 350 Gene3D G3DSA:3.90.79.10 229 347 7.0E-16 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 BUMPUSDA_RS02815 efa50ef0bb88d7a0977f0a2287ac6962 350 SMART SM00478 39 190 4.5E-30 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 BUMPUSDA_RS02815 efa50ef0bb88d7a0977f0a2287ac6962 350 Pfam PF14815 NUDIX domain 234 343 1.1E-16 T 23-04-2016 IPR029119 MutY, C-terminal BUMPUSDA_RS02815 efa50ef0bb88d7a0977f0a2287ac6962 350 SUPERFAMILY SSF55811 220 346 5.27E-14 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 BUMPUSDA_RS02815 efa50ef0bb88d7a0977f0a2287ac6962 350 PANTHER PTHR10359 2 310 1.8E-73 T 23-04-2016 BUMPUSDA_RS02815 efa50ef0bb88d7a0977f0a2287ac6962 350 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 165 3.4E-17 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 BUMPUSDA_RS02815 efa50ef0bb88d7a0977f0a2287ac6962 350 Gene3D G3DSA:1.10.1670.10 123 223 2.3E-33 T 23-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal BUMPUSDA_RS02815 efa50ef0bb88d7a0977f0a2287ac6962 350 Gene3D G3DSA:1.10.340.30 22 122 2.0E-35 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 BUMPUSDA_RS02815 efa50ef0bb88d7a0977f0a2287ac6962 350 PANTHER PTHR10359:SF1 2 310 1.8E-73 T 23-04-2016 BUMPUSDA_RS00685 1a7807f74dfc97d8cdec2449511aedce 221 Gene3D G3DSA:1.10.286.10 4 86 1.9E-23 T 23-04-2016 BUMPUSDA_RS00685 1a7807f74dfc97d8cdec2449511aedce 221 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 98 114 - T 23-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 BUMPUSDA_RS00685 1a7807f74dfc97d8cdec2449511aedce 221 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 40 216 1.7E-73 T 23-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 BUMPUSDA_RS00685 1a7807f74dfc97d8cdec2449511aedce 221 PANTHER PTHR11109 5 215 8.1E-86 T 23-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 BUMPUSDA_RS00685 1a7807f74dfc97d8cdec2449511aedce 221 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 36 219 32.16 T 23-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 BUMPUSDA_RS00685 1a7807f74dfc97d8cdec2449511aedce 221 SUPERFAMILY SSF55620 6 216 5.48E-70 T 23-04-2016 BUMPUSDA_RS00685 1a7807f74dfc97d8cdec2449511aedce 221 Gene3D G3DSA:3.30.1130.10 93 216 1.4E-47 T 23-04-2016 BUMPUSDA_RS00685 1a7807f74dfc97d8cdec2449511aedce 221 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 146 156 - T 23-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 BUMPUSDA_RS00685 1a7807f74dfc97d8cdec2449511aedce 221 Pfam PF01227 GTP cyclohydrolase I 40 216 1.7E-59 T 23-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 BUMPUSDA_RS01350 3ca5c1bb0d055390cc57bc9b8cfddce6 645 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 643 0.0 T 23-04-2016 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 BUMPUSDA_RS01350 3ca5c1bb0d055390cc57bc9b8cfddce6 645 ProSitePatterns PS01175 Ribonuclease II family signature. 485 509 - T 23-04-2016 IPR022966 Ribonuclease II/R, conserved site BUMPUSDA_RS01350 3ca5c1bb0d055390cc57bc9b8cfddce6 645 SUPERFAMILY SSF50249 83 171 3.26E-27 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS01350 3ca5c1bb0d055390cc57bc9b8cfddce6 645 PANTHER PTHR23355 21 643 2.2E-283 T 23-04-2016 BUMPUSDA_RS01350 3ca5c1bb0d055390cc57bc9b8cfddce6 645 SUPERFAMILY SSF50249 180 557 2.68E-112 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS01350 3ca5c1bb0d055390cc57bc9b8cfddce6 645 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 644 43.189 T 23-04-2016 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 BUMPUSDA_RS01350 3ca5c1bb0d055390cc57bc9b8cfddce6 645 SMART SM00955 190 518 3.9E-119 T 23-04-2016 BUMPUSDA_RS01350 3ca5c1bb0d055390cc57bc9b8cfddce6 645 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 642 4.3E-191 T 23-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 BUMPUSDA_RS01350 3ca5c1bb0d055390cc57bc9b8cfddce6 645 PANTHER PTHR23355:SF37 21 643 2.2E-283 T 23-04-2016 BUMPUSDA_RS01350 3ca5c1bb0d055390cc57bc9b8cfddce6 645 SUPERFAMILY SSF50249 9 76 1.71E-12 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS01350 3ca5c1bb0d055390cc57bc9b8cfddce6 645 SMART SM00357 23 79 2.1E-7 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 BUMPUSDA_RS01350 3ca5c1bb0d055390cc57bc9b8cfddce6 645 Pfam PF00773 RNB domain 190 517 4.2E-86 T 23-04-2016 BUMPUSDA_RS01350 3ca5c1bb0d055390cc57bc9b8cfddce6 645 SUPERFAMILY SSF50249 561 643 1.31E-14 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS01350 3ca5c1bb0d055390cc57bc9b8cfddce6 645 Pfam PF08206 Ribonuclease B OB domain 24 80 1.9E-16 T 23-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain BUMPUSDA_RS00545 08599115aceb15632328567449621861 548 Hamap MF_00098 Methionine--tRNA ligase [metG]. 7 546 38.377 T 23-04-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BUMPUSDA_RS00545 08599115aceb15632328567449621861 548 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 9 536 2.4E-168 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 BUMPUSDA_RS00545 08599115aceb15632328567449621861 548 Gene3D G3DSA:2.20.28.20 146 177 1.3E-16 T 23-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BUMPUSDA_RS00545 08599115aceb15632328567449621861 548 SUPERFAMILY SSF47323 390 545 1.12E-37 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS00545 08599115aceb15632328567449621861 548 Gene3D G3DSA:3.40.50.620 184 379 9.2E-79 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BUMPUSDA_RS00545 08599115aceb15632328567449621861 548 Gene3D G3DSA:3.40.50.620 8 145 9.2E-79 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BUMPUSDA_RS00545 08599115aceb15632328567449621861 548 Gene3D G3DSA:1.10.730.10 380 535 5.6E-36 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS00545 08599115aceb15632328567449621861 548 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 16 27 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS00545 08599115aceb15632328567449621861 548 SUPERFAMILY SSF52374 8 142 1.77E-94 T 23-04-2016 BUMPUSDA_RS00545 08599115aceb15632328567449621861 548 SUPERFAMILY SSF52374 177 388 1.77E-94 T 23-04-2016 BUMPUSDA_RS00545 08599115aceb15632328567449621861 548 PRINTS PR01041 Methionyl-tRNA synthetase signature 292 307 7.4E-26 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 BUMPUSDA_RS00545 08599115aceb15632328567449621861 548 PRINTS PR01041 Methionyl-tRNA synthetase signature 11 24 7.4E-26 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 BUMPUSDA_RS00545 08599115aceb15632328567449621861 548 PRINTS PR01041 Methionyl-tRNA synthetase signature 385 396 7.4E-26 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 BUMPUSDA_RS00545 08599115aceb15632328567449621861 548 PRINTS PR01041 Methionyl-tRNA synthetase signature 91 102 7.4E-26 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 BUMPUSDA_RS00545 08599115aceb15632328567449621861 548 PRINTS PR01041 Methionyl-tRNA synthetase signature 43 57 7.4E-26 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 BUMPUSDA_RS00545 08599115aceb15632328567449621861 548 PRINTS PR01041 Methionyl-tRNA synthetase signature 252 263 7.4E-26 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 BUMPUSDA_RS00545 08599115aceb15632328567449621861 548 PANTHER PTHR11946 7 548 6.5E-179 T 23-04-2016 BUMPUSDA_RS00545 08599115aceb15632328567449621861 548 SUPERFAMILY SSF57770 143 177 3.01E-12 T 23-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BUMPUSDA_RS00545 08599115aceb15632328567449621861 548 Pfam PF09334 tRNA synthetases class I (M) 9 397 7.5E-153 T 23-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS00545 08599115aceb15632328567449621861 548 PANTHER PTHR11946:SF86 7 548 6.5E-179 T 23-04-2016 BUMPUSDA_RS02225 3feee62fdd534aaba100d6f35202e952 505 SUPERFAMILY SSF50249 15 153 2.14E-39 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS02225 3feee62fdd534aaba100d6f35202e952 505 PANTHER PTHR22594:SF4 3 504 3.4E-232 T 23-04-2016 BUMPUSDA_RS02225 3feee62fdd534aaba100d6f35202e952 505 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 16 503 5.9E-196 T 23-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 BUMPUSDA_RS02225 3feee62fdd534aaba100d6f35202e952 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 261 278 1.5E-36 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 BUMPUSDA_RS02225 3feee62fdd534aaba100d6f35202e952 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 385 401 1.5E-36 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 BUMPUSDA_RS02225 3feee62fdd534aaba100d6f35202e952 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 214 230 1.5E-36 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 BUMPUSDA_RS02225 3feee62fdd534aaba100d6f35202e952 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 243 256 1.5E-36 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 BUMPUSDA_RS02225 3feee62fdd534aaba100d6f35202e952 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 198 208 1.5E-36 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 BUMPUSDA_RS02225 3feee62fdd534aaba100d6f35202e952 505 Gene3D G3DSA:3.30.930.10 156 499 4.6E-113 T 23-04-2016 BUMPUSDA_RS02225 3feee62fdd534aaba100d6f35202e952 505 Gene3D G3DSA:2.40.50.140 16 153 2.5E-40 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS02225 3feee62fdd534aaba100d6f35202e952 505 Pfam PF01336 OB-fold nucleic acid binding domain 67 145 1.1E-13 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 BUMPUSDA_RS02225 3feee62fdd534aaba100d6f35202e952 505 SUPERFAMILY SSF55681 161 501 2.79E-113 T 23-04-2016 BUMPUSDA_RS02225 3feee62fdd534aaba100d6f35202e952 505 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 20 505 41.857 T 23-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 BUMPUSDA_RS02225 3feee62fdd534aaba100d6f35202e952 505 Pfam PF00152 tRNA synthetases class II (D, K and N) 162 500 8.8E-84 T 23-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS02225 3feee62fdd534aaba100d6f35202e952 505 PANTHER PTHR22594 3 504 3.4E-232 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS00865 0de80a772090861e1167f964cb162982 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 36.952 T 23-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 BUMPUSDA_RS00865 0de80a772090861e1167f964cb162982 360 SMART SM00937 63 178 3.3E-53 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 BUMPUSDA_RS00865 0de80a772090861e1167f964cb162982 360 PANTHER PTHR11075 1 356 3.3E-152 T 23-04-2016 BUMPUSDA_RS00865 0de80a772090861e1167f964cb162982 360 Pfam PF00472 RF-1 domain 213 321 1.0E-38 T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 BUMPUSDA_RS00865 0de80a772090861e1167f964cb162982 360 Pfam PF03462 PCRF domain 13 203 4.5E-65 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 BUMPUSDA_RS00865 0de80a772090861e1167f964cb162982 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 357 5.6E-151 T 23-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 BUMPUSDA_RS00865 0de80a772090861e1167f964cb162982 360 Gene3D G3DSA:1.20.58.410 8 93 1.5E-6 T 23-04-2016 BUMPUSDA_RS00865 0de80a772090861e1167f964cb162982 360 Gene3D G3DSA:3.30.160.20 213 289 8.3E-34 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain BUMPUSDA_RS00865 0de80a772090861e1167f964cb162982 360 PANTHER PTHR11075:SF9 1 356 3.3E-152 T 23-04-2016 BUMPUSDA_RS00865 0de80a772090861e1167f964cb162982 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 BUMPUSDA_RS00865 0de80a772090861e1167f964cb162982 360 SUPERFAMILY SSF75620 12 353 2.49E-122 T 23-04-2016 BUMPUSDA_RS02130 b6df8dce629f120a09048894efcf7dc4 332 SMART SM00257 89 133 9.8E-8 T 23-04-2016 IPR018392 LysM domain BUMPUSDA_RS02130 b6df8dce629f120a09048894efcf7dc4 332 PANTHER PTHR21666 212 323 1.0E-23 T 23-04-2016 BUMPUSDA_RS02130 b6df8dce629f120a09048894efcf7dc4 332 Pfam PF01476 LysM domain 90 132 2.2E-7 T 23-04-2016 IPR018392 LysM domain BUMPUSDA_RS02130 b6df8dce629f120a09048894efcf7dc4 332 Gene3D G3DSA:3.10.350.10 89 132 1.7E-10 T 23-04-2016 IPR018392 LysM domain BUMPUSDA_RS02130 b6df8dce629f120a09048894efcf7dc4 332 Gene3D G3DSA:2.70.70.10 192 323 8.3E-24 T 23-04-2016 BUMPUSDA_RS02130 b6df8dce629f120a09048894efcf7dc4 332 SUPERFAMILY SSF51261 88 322 6.8E-28 T 23-04-2016 IPR011055 Duplicated hybrid motif BUMPUSDA_RS02130 b6df8dce629f120a09048894efcf7dc4 332 PANTHER PTHR21666:SF222 212 323 1.0E-23 T 23-04-2016 BUMPUSDA_RS02130 b6df8dce629f120a09048894efcf7dc4 332 Pfam PF01551 Peptidase family M23 228 318 6.5E-20 T 23-04-2016 IPR016047 Peptidase M23 BUMPUSDA_RS01815 9c6b7f80fb4a4a6f66551d7b2b9ffef6 114 PRINTS PR00332 Histidine triad family signature 95 105 5.6E-15 T 23-04-2016 IPR001310 Histidine triad (HIT) protein BUMPUSDA_RS01815 9c6b7f80fb4a4a6f66551d7b2b9ffef6 114 PRINTS PR00332 Histidine triad family signature 6 22 5.6E-15 T 23-04-2016 IPR001310 Histidine triad (HIT) protein BUMPUSDA_RS01815 9c6b7f80fb4a4a6f66551d7b2b9ffef6 114 PRINTS PR00332 Histidine triad family signature 27 45 5.6E-15 T 23-04-2016 IPR001310 Histidine triad (HIT) protein BUMPUSDA_RS01815 9c6b7f80fb4a4a6f66551d7b2b9ffef6 114 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 23-04-2016 IPR019808 Histidine triad, conserved site BUMPUSDA_RS01815 9c6b7f80fb4a4a6f66551d7b2b9ffef6 114 PANTHER PTHR23089:SF2 3 112 1.6E-38 T 23-04-2016 BUMPUSDA_RS01815 9c6b7f80fb4a4a6f66551d7b2b9ffef6 114 SUPERFAMILY SSF54197 1 110 6.5E-29 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 BUMPUSDA_RS01815 9c6b7f80fb4a4a6f66551d7b2b9ffef6 114 PANTHER PTHR23089 3 112 1.6E-38 T 23-04-2016 IPR001310 Histidine triad (HIT) protein BUMPUSDA_RS01815 9c6b7f80fb4a4a6f66551d7b2b9ffef6 114 Pfam PF01230 HIT domain 13 109 2.1E-23 T 23-04-2016 IPR001310 Histidine triad (HIT) protein BUMPUSDA_RS01815 9c6b7f80fb4a4a6f66551d7b2b9ffef6 114 Gene3D G3DSA:3.30.428.10 2 110 4.2E-28 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 BUMPUSDA_RS00490 ca2549c11f5499e1a4fa2d197a8491f8 177 SUPERFAMILY SSF160443 97 154 1.31E-9 T 23-04-2016 IPR002625 Smr domain BUMPUSDA_RS00490 ca2549c11f5499e1a4fa2d197a8491f8 177 Pfam PF01713 Smr domain 99 170 7.6E-15 T 23-04-2016 IPR002625 Smr domain BUMPUSDA_RS00490 ca2549c11f5499e1a4fa2d197a8491f8 177 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 175 38.974 T 23-04-2016 IPR022990 Uncharacterised protein family UPF0115 BUMPUSDA_RS00490 ca2549c11f5499e1a4fa2d197a8491f8 177 SMART SM00463 96 174 2.6E-16 T 23-04-2016 IPR002625 Smr domain BUMPUSDA_RS00490 ca2549c11f5499e1a4fa2d197a8491f8 177 PANTHER PTHR35562 1 176 7.6E-56 T 23-04-2016 BUMPUSDA_RS00490 ca2549c11f5499e1a4fa2d197a8491f8 177 PANTHER PTHR35562:SF1 1 176 7.6E-56 T 23-04-2016 BUMPUSDA_RS02715 622043e862318f7c1e47df9ee9449eea 254 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 163 248 8.5E-26 T 23-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 BUMPUSDA_RS02715 622043e862318f7c1e47df9ee9449eea 254 PANTHER PTHR10516 143 252 8.1E-38 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type BUMPUSDA_RS02715 622043e862318f7c1e47df9ee9449eea 254 Gene3D G3DSA:3.10.50.40 139 250 2.8E-37 T 23-04-2016 BUMPUSDA_RS02715 622043e862318f7c1e47df9ee9449eea 254 Gene3D G3DSA:1.10.287.460 36 138 6.3E-35 T 23-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 BUMPUSDA_RS02715 622043e862318f7c1e47df9ee9449eea 254 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 38 154 3.7E-28 T 23-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 BUMPUSDA_RS02715 622043e862318f7c1e47df9ee9449eea 254 SUPERFAMILY SSF54534 44 250 1.85E-59 T 23-04-2016 BUMPUSDA_RS00945 e795a11c78f0382c128271d890155bd9 108 SUPERFAMILY SSF52833 1 100 1.63E-33 T 23-04-2016 IPR012336 Thioredoxin-like fold BUMPUSDA_RS00945 e795a11c78f0382c128271d890155bd9 108 PANTHER PTHR10293 1 99 4.7E-50 T 23-04-2016 IPR004480 Monothiol glutaredoxin-related BUMPUSDA_RS00945 e795a11c78f0382c128271d890155bd9 108 Pfam PF00462 Glutaredoxin 16 80 5.4E-19 T 23-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 BUMPUSDA_RS00945 e795a11c78f0382c128271d890155bd9 108 PIRSF PIRSF005894 1 107 1.0E-48 T 23-04-2016 IPR014434 Monothiol glutaredoxin BUMPUSDA_RS00945 e795a11c78f0382c128271d890155bd9 108 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 1.7E-44 T 23-04-2016 IPR004480 Monothiol glutaredoxin-related BUMPUSDA_RS00945 e795a11c78f0382c128271d890155bd9 108 Gene3D G3DSA:3.40.30.10 7 100 8.1E-32 T 23-04-2016 IPR012336 Thioredoxin-like fold BUMPUSDA_RS01185 5ad7dfc7c6d7ac67aa6b3311e0a5b589 398 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 387 6.5E-34 T 23-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 BUMPUSDA_RS01185 5ad7dfc7c6d7ac67aa6b3311e0a5b589 398 Gene3D G3DSA:3.40.50.720 1 150 8.3E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain BUMPUSDA_RS01185 5ad7dfc7c6d7ac67aa6b3311e0a5b589 398 Gene3D G3DSA:1.10.1740.10 314 393 4.8E-24 T 23-04-2016 BUMPUSDA_RS01185 5ad7dfc7c6d7ac67aa6b3311e0a5b589 398 PIRSF PIRSF006205 1 397 1.2E-149 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 BUMPUSDA_RS01185 5ad7dfc7c6d7ac67aa6b3311e0a5b589 398 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 4.2E-35 T 23-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 BUMPUSDA_RS01185 5ad7dfc7c6d7ac67aa6b3311e0a5b589 398 SUPERFAMILY SSF69055 301 394 2.22E-26 T 23-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 BUMPUSDA_RS01185 5ad7dfc7c6d7ac67aa6b3311e0a5b589 398 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 2.4E-44 T 23-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 BUMPUSDA_RS01185 5ad7dfc7c6d7ac67aa6b3311e0a5b589 398 SUPERFAMILY SSF55347 126 274 1.28E-59 T 23-04-2016 BUMPUSDA_RS01185 5ad7dfc7c6d7ac67aa6b3311e0a5b589 398 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 395 3.5E-149 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 BUMPUSDA_RS01185 5ad7dfc7c6d7ac67aa6b3311e0a5b589 398 PANTHER PTHR30525 1 393 9.6E-191 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 BUMPUSDA_RS01185 5ad7dfc7c6d7ac67aa6b3311e0a5b589 398 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 392 44.426 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 BUMPUSDA_RS01185 5ad7dfc7c6d7ac67aa6b3311e0a5b589 398 SUPERFAMILY SSF51735 2 150 9.85E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain BUMPUSDA_RS00535 00686ff1fe3c454741eb4bdbf2d20281 470 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 252 264 - T 23-04-2016 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 BUMPUSDA_RS00535 00686ff1fe3c454741eb4bdbf2d20281 470 PIRSF PIRSF000109 1 470 1.2E-225 T 23-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 BUMPUSDA_RS00535 00686ff1fe3c454741eb4bdbf2d20281 470 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 2.2E-81 T 23-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 BUMPUSDA_RS00535 00686ff1fe3c454741eb4bdbf2d20281 470 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 167 195 2.2E-81 T 23-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 BUMPUSDA_RS00535 00686ff1fe3c454741eb4bdbf2d20281 470 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 2.2E-81 T 23-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 BUMPUSDA_RS00535 00686ff1fe3c454741eb4bdbf2d20281 470 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 2.2E-81 T 23-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 BUMPUSDA_RS00535 00686ff1fe3c454741eb4bdbf2d20281 470 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 248 275 2.2E-81 T 23-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 BUMPUSDA_RS00535 00686ff1fe3c454741eb4bdbf2d20281 470 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 2.2E-81 T 23-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 BUMPUSDA_RS00535 00686ff1fe3c454741eb4bdbf2d20281 470 SUPERFAMILY SSF51735 4 176 7.45E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain BUMPUSDA_RS00535 00686ff1fe3c454741eb4bdbf2d20281 470 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 467 1.7E-211 T 23-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 BUMPUSDA_RS00535 00686ff1fe3c454741eb4bdbf2d20281 470 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 168 5.4E-47 T 23-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 BUMPUSDA_RS00535 00686ff1fe3c454741eb4bdbf2d20281 470 PANTHER PTHR11811:SF25 1 466 1.0E-267 T 23-04-2016 BUMPUSDA_RS00535 00686ff1fe3c454741eb4bdbf2d20281 470 SUPERFAMILY SSF48179 176 467 3.95E-126 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 BUMPUSDA_RS00535 00686ff1fe3c454741eb4bdbf2d20281 470 Gene3D G3DSA:3.40.50.720 1 179 1.4E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain BUMPUSDA_RS00535 00686ff1fe3c454741eb4bdbf2d20281 470 Gene3D G3DSA:1.20.5.320 435 466 1.3E-21 T 23-04-2016 IPR012284 6-phosphogluconate dehydrogenase, domain 3 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 BUMPUSDA_RS00535 00686ff1fe3c454741eb4bdbf2d20281 470 PANTHER PTHR11811 1 466 1.0E-267 T 23-04-2016 BUMPUSDA_RS00535 00686ff1fe3c454741eb4bdbf2d20281 470 Gene3D G3DSA:1.10.1040.10 180 433 7.8E-108 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BUMPUSDA_RS00535 00686ff1fe3c454741eb4bdbf2d20281 470 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 178 466 5.8E-125 T 23-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 BUMPUSDA_RS00535 00686ff1fe3c454741eb4bdbf2d20281 470 SMART SM01350 178 467 4.2E-198 T 23-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 BUMPUSDA_RS00375 13204cade615fb85c94e9758b9098d7e 331 Pfam PF14841 FliG middle domain 115 184 7.5E-18 T 23-04-2016 IPR032779 Flagellar motor switch protein FliG, middle domain BUMPUSDA_RS00375 13204cade615fb85c94e9758b9098d7e 331 Pfam PF14842 FliG N-terminal domain 3 99 3.9E-21 T 23-04-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain BUMPUSDA_RS00375 13204cade615fb85c94e9758b9098d7e 331 Gene3D G3DSA:1.10.220.30 74 184 9.4E-19 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical BUMPUSDA_RS00375 13204cade615fb85c94e9758b9098d7e 331 Gene3D G3DSA:1.10.220.30 194 325 1.0E-22 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical BUMPUSDA_RS00375 13204cade615fb85c94e9758b9098d7e 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 114 137 6.5E-43 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BUMPUSDA_RS00375 13204cade615fb85c94e9758b9098d7e 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 247 267 6.5E-43 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BUMPUSDA_RS00375 13204cade615fb85c94e9758b9098d7e 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 3 19 6.5E-43 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BUMPUSDA_RS00375 13204cade615fb85c94e9758b9098d7e 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 225 245 6.5E-43 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BUMPUSDA_RS00375 13204cade615fb85c94e9758b9098d7e 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 32 58 6.5E-43 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BUMPUSDA_RS00375 13204cade615fb85c94e9758b9098d7e 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 194 219 6.5E-43 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BUMPUSDA_RS00375 13204cade615fb85c94e9758b9098d7e 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 271 297 6.5E-43 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BUMPUSDA_RS00375 13204cade615fb85c94e9758b9098d7e 331 SUPERFAMILY SSF48029 115 323 7.32E-40 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical BUMPUSDA_RS00375 13204cade615fb85c94e9758b9098d7e 331 Gene3D G3DSA:1.10.220.30 5 62 2.6E-11 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical BUMPUSDA_RS00375 13204cade615fb85c94e9758b9098d7e 331 Pfam PF01706 FliG C-terminal domain 218 320 7.4E-20 T 23-04-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal BUMPUSDA_RS00375 13204cade615fb85c94e9758b9098d7e 331 PANTHER PTHR30534 3 331 4.4E-56 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BUMPUSDA_RS00375 13204cade615fb85c94e9758b9098d7e 331 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 3 318 1.1E-71 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BUMPUSDA_RS00375 13204cade615fb85c94e9758b9098d7e 331 SUPERFAMILY SSF48029 4 113 2.88E-14 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical BUMPUSDA_RS00375 13204cade615fb85c94e9758b9098d7e 331 PANTHER PTHR30534:SF0 3 331 4.4E-56 T 23-04-2016 BUMPUSDA_RS02420 14c3c3fe0847b9b3790265e6858a94d6 427 Pfam PF07724 AAA domain (Cdc48 subfamily) 115 314 2.5E-48 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 BUMPUSDA_RS02420 14c3c3fe0847b9b3790265e6858a94d6 427 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 9 415 1.3E-201 T 23-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 BUMPUSDA_RS02420 14c3c3fe0847b9b3790265e6858a94d6 427 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 320 397 2.0E-13 T 23-04-2016 IPR019489 Clp ATPase, C-terminal BUMPUSDA_RS02420 14c3c3fe0847b9b3790265e6858a94d6 427 Gene3D G3DSA:1.10.8.60 319 417 4.1E-35 T 23-04-2016 BUMPUSDA_RS02420 14c3c3fe0847b9b3790265e6858a94d6 427 SMART SM01086 320 416 1.0E-27 T 23-04-2016 IPR019489 Clp ATPase, C-terminal BUMPUSDA_RS02420 14c3c3fe0847b9b3790265e6858a94d6 427 PANTHER PTHR11262 3 424 3.3E-234 T 23-04-2016 BUMPUSDA_RS02420 14c3c3fe0847b9b3790265e6858a94d6 427 SUPERFAMILY SSF57716 13 48 1.71E-11 T 23-04-2016 BUMPUSDA_RS02420 14c3c3fe0847b9b3790265e6858a94d6 427 SMART SM00382 114 290 7.9E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain BUMPUSDA_RS02420 14c3c3fe0847b9b3790265e6858a94d6 427 SMART SM00994 12 51 1.1E-23 T 23-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 BUMPUSDA_RS02420 14c3c3fe0847b9b3790265e6858a94d6 427 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 5 418 51.609 T 23-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 BUMPUSDA_RS02420 14c3c3fe0847b9b3790265e6858a94d6 427 Gene3D G3DSA:3.40.50.300 297 314 3.6E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02420 14c3c3fe0847b9b3790265e6858a94d6 427 Gene3D G3DSA:3.40.50.300 69 256 3.6E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02420 14c3c3fe0847b9b3790265e6858a94d6 427 Pfam PF06689 ClpX C4-type zinc finger 13 50 1.9E-20 T 23-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 BUMPUSDA_RS02420 14c3c3fe0847b9b3790265e6858a94d6 427 SUPERFAMILY SSF52540 65 404 2.3E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02420 14c3c3fe0847b9b3790265e6858a94d6 427 PANTHER PTHR11262:SF4 3 424 3.3E-234 T 23-04-2016 BUMPUSDA_RS00660 4eb385d73f0a121e35d997cc87ea8a00 355 PANTHER PTHR30307 2 351 1.3E-144 T 23-04-2016 BUMPUSDA_RS00660 4eb385d73f0a121e35d997cc87ea8a00 355 Gene3D G3DSA:2.40.10.240 64 120 1.4E-10 T 23-04-2016 BUMPUSDA_RS00660 4eb385d73f0a121e35d997cc87ea8a00 355 Gene3D G3DSA:3.40.1780.10 180 344 1.4E-84 T 23-04-2016 BUMPUSDA_RS00660 4eb385d73f0a121e35d997cc87ea8a00 355 Gene3D G3DSA:3.40.1780.10 1 62 1.4E-84 T 23-04-2016 BUMPUSDA_RS00660 4eb385d73f0a121e35d997cc87ea8a00 355 SUPERFAMILY SSF111337 4 344 5.89E-119 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 BUMPUSDA_RS00660 4eb385d73f0a121e35d997cc87ea8a00 355 PANTHER PTHR30307:SF0 2 351 1.3E-144 T 23-04-2016 BUMPUSDA_RS00660 4eb385d73f0a121e35d997cc87ea8a00 355 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 345 41.348 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 BUMPUSDA_RS00660 4eb385d73f0a121e35d997cc87ea8a00 355 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 344 1.8E-126 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 BUMPUSDA_RS00660 4eb385d73f0a121e35d997cc87ea8a00 355 Pfam PF02547 Queuosine biosynthesis protein 4 344 1.7E-113 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 BUMPUSDA_RS02620 aa129998848e09a749b4075680e3d679 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 23-04-2016 IPR019972 Ribosomal protein L14P, conserved site BUMPUSDA_RS02620 aa129998848e09a749b4075680e3d679 122 Gene3D G3DSA:2.40.150.20 1 122 2.0E-55 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02620 aa129998848e09a749b4075680e3d679 122 SMART SM01374 1 122 5.6E-84 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02620 aa129998848e09a749b4075680e3d679 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.657 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02620 aa129998848e09a749b4075680e3d679 122 PANTHER PTHR11761 1 122 3.3E-75 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02620 aa129998848e09a749b4075680e3d679 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 1.2E-58 T 23-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 BUMPUSDA_RS02620 aa129998848e09a749b4075680e3d679 122 SUPERFAMILY SSF50193 1 122 1.96E-51 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02620 aa129998848e09a749b4075680e3d679 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 1.1E-54 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02135 a375ae3ef945a3d5a081a6859ac0ef07 160 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 156 5.7E-63 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 BUMPUSDA_RS02135 a375ae3ef945a3d5a081a6859ac0ef07 160 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 23-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 BUMPUSDA_RS02135 a375ae3ef945a3d5a081a6859ac0ef07 160 Pfam PF02542 YgbB family 1 154 1.1E-56 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 BUMPUSDA_RS02135 a375ae3ef945a3d5a081a6859ac0ef07 160 Gene3D G3DSA:3.30.1330.50 1 156 1.9E-59 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 BUMPUSDA_RS02135 a375ae3ef945a3d5a081a6859ac0ef07 160 PANTHER PTHR32125 1 156 1.5E-42 T 23-04-2016 BUMPUSDA_RS02135 a375ae3ef945a3d5a081a6859ac0ef07 160 SUPERFAMILY SSF69765 1 156 8.24E-57 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 BUMPUSDA_RS02135 a375ae3ef945a3d5a081a6859ac0ef07 160 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 32.292 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 BUMPUSDA_RS01120 e4edd3f26280d088916d2707e4e202af 571 PANTHER PTHR30627 11 569 5.5E-204 T 23-04-2016 BUMPUSDA_RS01120 e4edd3f26280d088916d2707e4e202af 571 SUPERFAMILY SSF56601 236 566 1.04E-84 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like BUMPUSDA_RS01120 e4edd3f26280d088916d2707e4e202af 571 PANTHER PTHR30627:SF1 11 569 5.5E-204 T 23-04-2016 BUMPUSDA_RS01120 e4edd3f26280d088916d2707e4e202af 571 Pfam PF03717 Penicillin-binding Protein dimerisation domain 69 222 4.4E-17 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 BUMPUSDA_RS01120 e4edd3f26280d088916d2707e4e202af 571 Gene3D G3DSA:3.40.710.10 243 562 2.7E-84 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like BUMPUSDA_RS01120 e4edd3f26280d088916d2707e4e202af 571 Gene3D G3DSA:3.90.1310.10 143 242 1.2E-27 T 23-04-2016 BUMPUSDA_RS01120 e4edd3f26280d088916d2707e4e202af 571 Pfam PF00905 Penicillin binding protein transpeptidase domain 261 556 2.1E-77 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BUMPUSDA_RS01120 e4edd3f26280d088916d2707e4e202af 571 SUPERFAMILY SSF56519 64 224 2.62E-39 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 BUMPUSDA_RS02110 c0b580cdf822db92ccac149a8fe22f09 557 SUPERFAMILY SSF52540 4 269 1.3E-121 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02110 c0b580cdf822db92ccac149a8fe22f09 557 Pfam PF00117 Glutamine amidotransferase class-I 301 535 1.5E-57 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 BUMPUSDA_RS02110 c0b580cdf822db92ccac149a8fe22f09 557 Pfam PF06418 CTP synthase N-terminus 5 266 4.7E-125 T 23-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 BUMPUSDA_RS02110 c0b580cdf822db92ccac149a8fe22f09 557 Gene3D G3DSA:3.40.50.880 288 543 2.2E-94 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like BUMPUSDA_RS02110 c0b580cdf822db92ccac149a8fe22f09 557 SUPERFAMILY SSF52317 289 542 2.38E-77 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like BUMPUSDA_RS02110 c0b580cdf822db92ccac149a8fe22f09 557 Gene3D G3DSA:3.40.50.300 2 282 8.8E-133 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02110 c0b580cdf822db92ccac149a8fe22f09 557 TIGRFAM TIGR00337 PyrG: CTP synthase 2 536 1.1E-247 T 23-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 BUMPUSDA_RS02110 c0b580cdf822db92ccac149a8fe22f09 557 PANTHER PTHR11550 1 549 0.0 T 23-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 BUMPUSDA_RS02110 c0b580cdf822db92ccac149a8fe22f09 557 Hamap MF_01227 CTP synthase [pyrG]. 3 541 49.38 T 23-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 BUMPUSDA_RS00135 d2115cf8071b65fa78431ac9d6b4fc6b 608 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 608 38.275 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 BUMPUSDA_RS00135 d2115cf8071b65fa78431ac9d6b4fc6b 608 SUPERFAMILY SSF53697 247 608 9.28E-99 T 23-04-2016 BUMPUSDA_RS00135 d2115cf8071b65fa78431ac9d6b4fc6b 608 PANTHER PTHR10937 1 608 1.4E-294 T 23-04-2016 BUMPUSDA_RS00135 d2115cf8071b65fa78431ac9d6b4fc6b 608 Gene3D G3DSA:3.40.50.10490 244 448 4.9E-59 T 23-04-2016 BUMPUSDA_RS00135 d2115cf8071b65fa78431ac9d6b4fc6b 608 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 608 1.9E-245 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 BUMPUSDA_RS00135 d2115cf8071b65fa78431ac9d6b4fc6b 608 PANTHER PTHR10937:SF0 1 608 1.4E-294 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 BUMPUSDA_RS00135 d2115cf8071b65fa78431ac9d6b4fc6b 608 Gene3D G3DSA:3.40.50.10490 449 608 7.6E-62 T 23-04-2016 BUMPUSDA_RS00135 d2115cf8071b65fa78431ac9d6b4fc6b 608 Gene3D G3DSA:3.60.20.10 2 234 2.5E-75 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal BUMPUSDA_RS00135 d2115cf8071b65fa78431ac9d6b4fc6b 608 SUPERFAMILY SSF56235 2 233 5.66E-69 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal BUMPUSDA_RS00135 d2115cf8071b65fa78431ac9d6b4fc6b 608 Pfam PF13522 Glutamine amidotransferase domain 66 183 2.4E-15 T 23-04-2016 BUMPUSDA_RS00135 d2115cf8071b65fa78431ac9d6b4fc6b 608 Pfam PF01380 SIS domain 462 589 7.0E-22 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 BUMPUSDA_RS00135 d2115cf8071b65fa78431ac9d6b4fc6b 608 Pfam PF01380 SIS domain 292 419 8.7E-29 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 BUMPUSDA_RS00730 b90eb603098e7b3ec97124f4bda0a142 386 SUPERFAMILY SSF52317 157 379 1.1E-60 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like BUMPUSDA_RS00730 b90eb603098e7b3ec97124f4bda0a142 386 SUPERFAMILY SSF52021 9 147 1.2E-54 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 BUMPUSDA_RS00730 b90eb603098e7b3ec97124f4bda0a142 386 PRINTS PR00096 Glutamine amidotransferase superfamily signature 240 249 2.7E-11 T 23-04-2016 BUMPUSDA_RS00730 b90eb603098e7b3ec97124f4bda0a142 386 PRINTS PR00096 Glutamine amidotransferase superfamily signature 268 279 2.7E-11 T 23-04-2016 BUMPUSDA_RS00730 b90eb603098e7b3ec97124f4bda0a142 386 PRINTS PR00096 Glutamine amidotransferase superfamily signature 353 366 2.7E-11 T 23-04-2016 BUMPUSDA_RS00730 b90eb603098e7b3ec97124f4bda0a142 386 PANTHER PTHR11405 194 378 9.5E-212 T 23-04-2016 BUMPUSDA_RS00730 b90eb603098e7b3ec97124f4bda0a142 386 PANTHER PTHR11405 7 177 9.5E-212 T 23-04-2016 BUMPUSDA_RS00730 b90eb603098e7b3ec97124f4bda0a142 386 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 7 382 46.328 T 23-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 BUMPUSDA_RS00730 b90eb603098e7b3ec97124f4bda0a142 386 Pfam PF00117 Glutamine amidotransferase class-I 200 376 6.4E-45 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 BUMPUSDA_RS00730 b90eb603098e7b3ec97124f4bda0a142 386 Gene3D G3DSA:3.50.30.20 9 148 2.6E-59 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 BUMPUSDA_RS00730 b90eb603098e7b3ec97124f4bda0a142 386 PRINTS PR00097 Anthranilate synthase component II signature 353 366 9.2E-6 T 23-04-2016 BUMPUSDA_RS00730 b90eb603098e7b3ec97124f4bda0a142 386 PRINTS PR00097 Anthranilate synthase component II signature 268 279 9.2E-6 T 23-04-2016 BUMPUSDA_RS00730 b90eb603098e7b3ec97124f4bda0a142 386 PRINTS PR00097 Anthranilate synthase component II signature 240 249 9.2E-6 T 23-04-2016 BUMPUSDA_RS00730 b90eb603098e7b3ec97124f4bda0a142 386 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 9 378 2.2E-143 T 23-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 BUMPUSDA_RS00730 b90eb603098e7b3ec97124f4bda0a142 386 SMART SM01097 7 137 4.4E-87 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 BUMPUSDA_RS00730 b90eb603098e7b3ec97124f4bda0a142 386 Gene3D G3DSA:3.40.50.880 158 378 2.5E-76 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like BUMPUSDA_RS00730 b90eb603098e7b3ec97124f4bda0a142 386 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 9 136 5.2E-50 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 BUMPUSDA_RS00730 b90eb603098e7b3ec97124f4bda0a142 386 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 237 251 1.3E-38 T 23-04-2016 BUMPUSDA_RS00730 b90eb603098e7b3ec97124f4bda0a142 386 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 198 212 1.3E-38 T 23-04-2016 BUMPUSDA_RS00730 b90eb603098e7b3ec97124f4bda0a142 386 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 310 321 1.3E-38 T 23-04-2016 BUMPUSDA_RS00730 b90eb603098e7b3ec97124f4bda0a142 386 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 285 302 1.3E-38 T 23-04-2016 BUMPUSDA_RS00730 b90eb603098e7b3ec97124f4bda0a142 386 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 268 284 1.3E-38 T 23-04-2016 BUMPUSDA_RS00750 4a80407d080266ebfe266f93aced6190 940 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 643 1.1E-201 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS00750 4a80407d080266ebfe266f93aced6190 940 Gene3D G3DSA:1.10.730.10 644 790 2.7E-36 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS00750 4a80407d080266ebfe266f93aced6190 940 Pfam PF06827 Zinc finger found in FPG and IleRS 901 927 4.0E-6 T 23-04-2016 IPR010663 Zinc finger, FPG/IleRS-type BUMPUSDA_RS00750 4a80407d080266ebfe266f93aced6190 940 Gene3D G3DSA:3.90.740.10 207 391 2.6E-48 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS00750 4a80407d080266ebfe266f93aced6190 940 Pfam PF08264 Anticodon-binding domain of tRNA 687 843 3.8E-25 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS00750 4a80407d080266ebfe266f93aced6190 940 SUPERFAMILY SSF47323 654 927 2.06E-60 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS00750 4a80407d080266ebfe266f93aced6190 940 SUPERFAMILY SSF50677 215 405 6.7E-49 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS00750 4a80407d080266ebfe266f93aced6190 940 SUPERFAMILY SSF52374 3 202 1.29E-128 T 23-04-2016 BUMPUSDA_RS00750 4a80407d080266ebfe266f93aced6190 940 SUPERFAMILY SSF52374 405 651 1.29E-128 T 23-04-2016 BUMPUSDA_RS00750 4a80407d080266ebfe266f93aced6190 940 PANTHER PTHR11946:SF11 6 260 0.0 T 23-04-2016 BUMPUSDA_RS00750 4a80407d080266ebfe266f93aced6190 940 PANTHER PTHR11946:SF11 284 940 0.0 T 23-04-2016 BUMPUSDA_RS00750 4a80407d080266ebfe266f93aced6190 940 Gene3D G3DSA:3.40.50.620 17 205 2.4E-127 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BUMPUSDA_RS00750 4a80407d080266ebfe266f93aced6190 940 Gene3D G3DSA:3.40.50.620 405 640 2.4E-127 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BUMPUSDA_RS00750 4a80407d080266ebfe266f93aced6190 940 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 239 262 2.3E-31 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 BUMPUSDA_RS00750 4a80407d080266ebfe266f93aced6190 940 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 403 418 2.3E-31 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 BUMPUSDA_RS00750 4a80407d080266ebfe266f93aced6190 940 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 2.3E-31 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 BUMPUSDA_RS00750 4a80407d080266ebfe266f93aced6190 940 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 528 541 2.3E-31 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 BUMPUSDA_RS00750 4a80407d080266ebfe266f93aced6190 940 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 563 572 2.3E-31 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 BUMPUSDA_RS00750 4a80407d080266ebfe266f93aced6190 940 PANTHER PTHR11946 6 260 0.0 T 23-04-2016 BUMPUSDA_RS00750 4a80407d080266ebfe266f93aced6190 940 PANTHER PTHR11946 284 940 0.0 T 23-04-2016 BUMPUSDA_RS00750 4a80407d080266ebfe266f93aced6190 940 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 931 20.249 T 23-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 BUMPUSDA_RS00750 4a80407d080266ebfe266f93aced6190 940 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 14 842 1.3E-272 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 BUMPUSDA_RS00750 4a80407d080266ebfe266f93aced6190 940 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS01075 ae1d857688e65298fc03261e1a97d849 418 Gene3D G3DSA:3.90.640.10 235 297 1.7E-15 T 23-04-2016 BUMPUSDA_RS01075 ae1d857688e65298fc03261e1a97d849 418 Gene3D G3DSA:3.30.420.40 298 358 3.1E-24 T 23-04-2016 BUMPUSDA_RS01075 ae1d857688e65298fc03261e1a97d849 418 Gene3D G3DSA:3.30.420.40 209 234 3.1E-24 T 23-04-2016 BUMPUSDA_RS01075 ae1d857688e65298fc03261e1a97d849 418 Pfam PF02491 SHS2 domain inserted in FTSA 86 162 2.9E-27 T 23-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 BUMPUSDA_RS01075 ae1d857688e65298fc03261e1a97d849 418 SUPERFAMILY SSF53067 9 197 9.84E-54 T 23-04-2016 BUMPUSDA_RS01075 ae1d857688e65298fc03261e1a97d849 418 PIRSF PIRSF003101 2 418 2.3E-133 T 23-04-2016 IPR020823 Cell division protein FtsA GO:0007049 BUMPUSDA_RS01075 ae1d857688e65298fc03261e1a97d849 418 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 2.2E-150 T 23-04-2016 IPR020823 Cell division protein FtsA GO:0007049 BUMPUSDA_RS01075 ae1d857688e65298fc03261e1a97d849 418 PANTHER PTHR32432:SF4 1 417 9.1E-137 T 23-04-2016 BUMPUSDA_RS01075 ae1d857688e65298fc03261e1a97d849 418 Gene3D G3DSA:3.30.420.40 168 208 5.9E-18 T 23-04-2016 BUMPUSDA_RS01075 ae1d857688e65298fc03261e1a97d849 418 Gene3D G3DSA:3.30.420.40 5 91 5.9E-18 T 23-04-2016 BUMPUSDA_RS01075 ae1d857688e65298fc03261e1a97d849 418 SMART SM00842 10 196 3.3E-84 T 23-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 BUMPUSDA_RS01075 ae1d857688e65298fc03261e1a97d849 418 Pfam PF14450 Cell division protein FtsA 207 381 3.2E-24 T 23-04-2016 BUMPUSDA_RS01075 ae1d857688e65298fc03261e1a97d849 418 Gene3D G3DSA:3.30.1490.110 92 167 1.8E-14 T 23-04-2016 BUMPUSDA_RS01075 ae1d857688e65298fc03261e1a97d849 418 SUPERFAMILY SSF53067 198 384 2.66E-41 T 23-04-2016 BUMPUSDA_RS01075 ae1d857688e65298fc03261e1a97d849 418 PANTHER PTHR32432 1 417 9.1E-137 T 23-04-2016 BUMPUSDA_RS01075 ae1d857688e65298fc03261e1a97d849 418 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 418 26.721 T 23-04-2016 IPR020823 Cell division protein FtsA GO:0007049 BUMPUSDA_RS01565 791214eca23041c28bb8cd9383e4f399 558 Gene3D G3DSA:2.40.50.140 449 515 5.0E-11 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS01565 791214eca23041c28bb8cd9383e4f399 558 Gene3D G3DSA:2.40.50.140 102 172 7.2E-14 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS01565 791214eca23041c28bb8cd9383e4f399 558 Gene3D G3DSA:2.40.50.140 192 278 3.1E-30 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS01565 791214eca23041c28bb8cd9383e4f399 558 Gene3D G3DSA:2.40.50.140 280 364 1.9E-28 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS01565 791214eca23041c28bb8cd9383e4f399 558 Gene3D G3DSA:2.40.50.140 21 101 4.9E-8 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS01565 791214eca23041c28bb8cd9383e4f399 558 Gene3D G3DSA:2.40.50.140 367 448 5.1E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS01565 791214eca23041c28bb8cd9383e4f399 558 SMART SM00316 103 171 8.3E-8 T 23-04-2016 IPR022967 RNA-binding domain, S1 BUMPUSDA_RS01565 791214eca23041c28bb8cd9383e4f399 558 SMART SM00316 190 260 8.7E-27 T 23-04-2016 IPR022967 RNA-binding domain, S1 BUMPUSDA_RS01565 791214eca23041c28bb8cd9383e4f399 558 SMART SM00316 19 87 0.33 T 23-04-2016 IPR022967 RNA-binding domain, S1 BUMPUSDA_RS01565 791214eca23041c28bb8cd9383e4f399 558 SMART SM00316 449 519 4.7E-7 T 23-04-2016 IPR022967 RNA-binding domain, S1 BUMPUSDA_RS01565 791214eca23041c28bb8cd9383e4f399 558 SMART SM00316 362 434 4.7E-19 T 23-04-2016 IPR022967 RNA-binding domain, S1 BUMPUSDA_RS01565 791214eca23041c28bb8cd9383e4f399 558 SMART SM00316 275 347 2.3E-24 T 23-04-2016 IPR022967 RNA-binding domain, S1 BUMPUSDA_RS01565 791214eca23041c28bb8cd9383e4f399 558 SUPERFAMILY SSF50249 103 184 2.76E-13 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS01565 791214eca23041c28bb8cd9383e4f399 558 PANTHER PTHR10724:SF6 1 514 3.1E-253 T 23-04-2016 BUMPUSDA_RS01565 791214eca23041c28bb8cd9383e4f399 558 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 6.7E-216 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS01565 791214eca23041c28bb8cd9383e4f399 558 SUPERFAMILY SSF50249 255 363 1.22E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS01565 791214eca23041c28bb8cd9383e4f399 558 Pfam PF00575 S1 RNA binding domain 448 515 1.4E-4 T 23-04-2016 IPR003029 S1 domain GO:0003676 BUMPUSDA_RS01565 791214eca23041c28bb8cd9383e4f399 558 Pfam PF00575 S1 RNA binding domain 361 434 2.1E-18 T 23-04-2016 IPR003029 S1 domain GO:0003676 BUMPUSDA_RS01565 791214eca23041c28bb8cd9383e4f399 558 Pfam PF00575 S1 RNA binding domain 190 260 6.1E-21 T 23-04-2016 IPR003029 S1 domain GO:0003676 BUMPUSDA_RS01565 791214eca23041c28bb8cd9383e4f399 558 Pfam PF00575 S1 RNA binding domain 279 347 2.3E-18 T 23-04-2016 IPR003029 S1 domain GO:0003676 BUMPUSDA_RS01565 791214eca23041c28bb8cd9383e4f399 558 Pfam PF00575 S1 RNA binding domain 103 171 1.8E-9 T 23-04-2016 IPR003029 S1 domain GO:0003676 BUMPUSDA_RS01565 791214eca23041c28bb8cd9383e4f399 558 SUPERFAMILY SSF50249 190 275 4.1E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS01565 791214eca23041c28bb8cd9383e4f399 558 SUPERFAMILY SSF50249 342 440 3.13E-23 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS01565 791214eca23041c28bb8cd9383e4f399 558 SUPERFAMILY SSF50249 429 532 9.7E-15 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS01565 791214eca23041c28bb8cd9383e4f399 558 PIRSF PIRSF002111 1 534 3.5E-210 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS01565 791214eca23041c28bb8cd9383e4f399 558 PANTHER PTHR10724 1 514 3.1E-253 T 23-04-2016 BUMPUSDA_RS01565 791214eca23041c28bb8cd9383e4f399 558 SUPERFAMILY SSF50249 2 112 4.05E-17 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS01565 791214eca23041c28bb8cd9383e4f399 558 PRINTS PR00681 Ribosomal protein S1 signature 39 53 1.4E-96 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS01565 791214eca23041c28bb8cd9383e4f399 558 PRINTS PR00681 Ribosomal protein S1 signature 290 309 1.4E-96 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS01565 791214eca23041c28bb8cd9383e4f399 558 PRINTS PR00681 Ribosomal protein S1 signature 84 103 1.4E-96 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS01565 791214eca23041c28bb8cd9383e4f399 558 PRINTS PR00681 Ribosomal protein S1 signature 21 39 1.4E-96 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS01565 791214eca23041c28bb8cd9383e4f399 558 PRINTS PR00681 Ribosomal protein S1 signature 126 143 1.4E-96 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS01565 791214eca23041c28bb8cd9383e4f399 558 PRINTS PR00681 Ribosomal protein S1 signature 108 124 1.4E-96 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS01565 791214eca23041c28bb8cd9383e4f399 558 PRINTS PR00681 Ribosomal protein S1 signature 330 348 1.4E-96 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS01565 791214eca23041c28bb8cd9383e4f399 558 PRINTS PR00681 Ribosomal protein S1 signature 155 175 1.4E-96 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS01565 791214eca23041c28bb8cd9383e4f399 558 PRINTS PR00681 Ribosomal protein S1 signature 212 233 1.4E-96 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS01545 4fcbf09bbee8dd9470e9d36c207541d8 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 300 7.5E-121 T 23-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 BUMPUSDA_RS01545 4fcbf09bbee8dd9470e9d36c207541d8 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 1.2E-77 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 BUMPUSDA_RS01545 4fcbf09bbee8dd9470e9d36c207541d8 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 1.2E-77 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 BUMPUSDA_RS01545 4fcbf09bbee8dd9470e9d36c207541d8 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 1.2E-77 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 BUMPUSDA_RS01545 4fcbf09bbee8dd9470e9d36c207541d8 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 1.2E-77 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 BUMPUSDA_RS01545 4fcbf09bbee8dd9470e9d36c207541d8 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 1.2E-77 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 BUMPUSDA_RS01545 4fcbf09bbee8dd9470e9d36c207541d8 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 1.2E-77 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 BUMPUSDA_RS01545 4fcbf09bbee8dd9470e9d36c207541d8 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 1.2E-77 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 BUMPUSDA_RS01545 4fcbf09bbee8dd9470e9d36c207541d8 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 1.2E-77 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 BUMPUSDA_RS01545 4fcbf09bbee8dd9470e9d36c207541d8 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 1.2E-77 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 BUMPUSDA_RS01545 4fcbf09bbee8dd9470e9d36c207541d8 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 44.723 T 23-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 BUMPUSDA_RS01545 4fcbf09bbee8dd9470e9d36c207541d8 320 Gene3D G3DSA:3.40.50.450 3 215 1.3E-72 T 23-04-2016 BUMPUSDA_RS01545 4fcbf09bbee8dd9470e9d36c207541d8 320 PIRSF PIRSF000532 1 320 1.7E-125 T 23-04-2016 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 BUMPUSDA_RS01545 4fcbf09bbee8dd9470e9d36c207541d8 320 SUPERFAMILY SSF53784 3 314 5.49E-109 T 23-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 BUMPUSDA_RS01545 4fcbf09bbee8dd9470e9d36c207541d8 320 Pfam PF00365 Phosphofructokinase 4 276 2.3E-104 T 23-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 BUMPUSDA_RS01545 4fcbf09bbee8dd9470e9d36c207541d8 320 PANTHER PTHR13697:SF4 3 306 5.8E-128 T 23-04-2016 BUMPUSDA_RS01545 4fcbf09bbee8dd9470e9d36c207541d8 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 23-04-2016 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 BUMPUSDA_RS01545 4fcbf09bbee8dd9470e9d36c207541d8 320 PANTHER PTHR13697 3 306 5.8E-128 T 23-04-2016 BUMPUSDA_RS01380 ed9c010a0154cf0bcf91b9f2d374e672 486 Pfam PF13091 PLD-like domain 327 445 4.9E-22 T 23-04-2016 IPR025202 Phospholipase D-like domain BUMPUSDA_RS01380 ed9c010a0154cf0bcf91b9f2d374e672 486 Pfam PF13091 PLD-like domain 135 247 9.5E-9 T 23-04-2016 IPR025202 Phospholipase D-like domain BUMPUSDA_RS01380 ed9c010a0154cf0bcf91b9f2d374e672 486 PANTHER PTHR21248:SF9 18 486 2.0E-227 T 23-04-2016 BUMPUSDA_RS01380 ed9c010a0154cf0bcf91b9f2d374e672 486 SMART SM00155 399 426 1.1E-4 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 BUMPUSDA_RS01380 ed9c010a0154cf0bcf91b9f2d374e672 486 SMART SM00155 219 246 0.011 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 BUMPUSDA_RS01380 ed9c010a0154cf0bcf91b9f2d374e672 486 Gene3D G3DSA:3.30.870.10 318 459 2.9E-33 T 23-04-2016 BUMPUSDA_RS01380 ed9c010a0154cf0bcf91b9f2d374e672 486 SUPERFAMILY SSF56024 274 472 4.71E-45 T 23-04-2016 BUMPUSDA_RS01380 ed9c010a0154cf0bcf91b9f2d374e672 486 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 10 486 2.8E-172 T 23-04-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 BUMPUSDA_RS01380 ed9c010a0154cf0bcf91b9f2d374e672 486 Gene3D G3DSA:3.30.870.10 115 317 2.0E-28 T 23-04-2016 BUMPUSDA_RS01380 ed9c010a0154cf0bcf91b9f2d374e672 486 SUPERFAMILY SSF56024 69 315 2.25E-39 T 23-04-2016 BUMPUSDA_RS01380 ed9c010a0154cf0bcf91b9f2d374e672 486 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 486 49.429 T 23-04-2016 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 BUMPUSDA_RS01380 ed9c010a0154cf0bcf91b9f2d374e672 486 PANTHER PTHR21248 18 486 2.0E-227 T 23-04-2016 BUMPUSDA_RS02305 2e817854c8715934937fc3f470af0f94 1052 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 1 727 9.2E-172 T 23-04-2016 BUMPUSDA_RS02305 2e817854c8715934937fc3f470af0f94 1052 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1050 9.839 T 23-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 BUMPUSDA_RS02305 2e817854c8715934937fc3f470af0f94 1052 PANTHER PTHR30591 1 1019 3.5E-130 T 23-04-2016 BUMPUSDA_RS02305 2e817854c8715934937fc3f470af0f94 1052 Gene3D G3DSA:1.10.10.160 86 172 5.9E-18 T 23-04-2016 IPR013986 DExx box DNA helicase domain BUMPUSDA_RS02305 2e817854c8715934937fc3f470af0f94 1052 SUPERFAMILY SSF52980 759 1047 3.16E-68 T 23-04-2016 IPR011335 Restriction endonuclease type II-like BUMPUSDA_RS02305 2e817854c8715934937fc3f470af0f94 1052 SUPERFAMILY SSF52540 299 723 2.97E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02305 2e817854c8715934937fc3f470af0f94 1052 SUPERFAMILY SSF52540 1 291 1.43E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02305 2e817854c8715934937fc3f470af0f94 1052 PANTHER PTHR30591:SF1 1 1019 3.5E-130 T 23-04-2016 BUMPUSDA_RS00895 bc06ac9f008d9bcb5ba4c8cbe5a6f14d 87 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 22 77 7.2E-8 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 BUMPUSDA_RS00895 bc06ac9f008d9bcb5ba4c8cbe5a6f14d 87 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 BUMPUSDA_RS00895 bc06ac9f008d9bcb5ba4c8cbe5a6f14d 87 SUPERFAMILY SSF54292 5 87 1.97E-15 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 BUMPUSDA_RS00895 bc06ac9f008d9bcb5ba4c8cbe5a6f14d 87 Gene3D G3DSA:3.10.20.30 6 86 2.6E-14 T 23-04-2016 IPR012675 Beta-grasp domain BUMPUSDA_RS03000 9ca83baf2aca24026ecc4049a5ec67ec 490 PANTHER PTHR11101:SF59 2 487 2.5E-228 T 23-04-2016 BUMPUSDA_RS03000 9ca83baf2aca24026ecc4049a5ec67ec 490 PANTHER PTHR11101 2 487 2.5E-228 T 23-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 BUMPUSDA_RS03000 9ca83baf2aca24026ecc4049a5ec67ec 490 Pfam PF01384 Phosphate transporter family 30 479 2.6E-83 T 23-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 BUMPUSDA_RS01855 6a4a153e57daeb362055cffd4f8abe33 310 SMART SM00450 135 236 3.4E-16 T 23-04-2016 IPR001763 Rhodanese-like domain BUMPUSDA_RS01855 6a4a153e57daeb362055cffd4f8abe33 310 Gene3D G3DSA:3.40.250.10 115 250 6.9E-32 T 23-04-2016 IPR001763 Rhodanese-like domain BUMPUSDA_RS01855 6a4a153e57daeb362055cffd4f8abe33 310 Pfam PF12368 Rhodanase C-terminal 244 306 5.6E-17 T 23-04-2016 IPR022111 Rhodanase, C-terminal BUMPUSDA_RS01855 6a4a153e57daeb362055cffd4f8abe33 310 Pfam PF00581 Rhodanese-like domain 138 230 1.7E-11 T 23-04-2016 IPR001763 Rhodanese-like domain BUMPUSDA_RS01855 6a4a153e57daeb362055cffd4f8abe33 310 SUPERFAMILY SSF52821 113 266 1.23E-28 T 23-04-2016 IPR001763 Rhodanese-like domain BUMPUSDA_RS01855 6a4a153e57daeb362055cffd4f8abe33 310 PANTHER PTHR22778:SF21 1 309 3.7E-86 T 23-04-2016 BUMPUSDA_RS01855 6a4a153e57daeb362055cffd4f8abe33 310 PANTHER PTHR22778 1 309 3.7E-86 T 23-04-2016 BUMPUSDA_RS01855 6a4a153e57daeb362055cffd4f8abe33 310 Hamap MF_00469 UPF0176 protein YceA [yceA]. 22 276 37.742 T 23-04-2016 IPR020936 Uncharacterised protein family UPF0176 BUMPUSDA_RS02975 1490b2b3a4d876d2d40a41c717e0e303 325 PANTHER PTHR22594 12 324 1.2E-115 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS02975 1490b2b3a4d876d2d40a41c717e0e303 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 99 116 5.1E-5 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 BUMPUSDA_RS02975 1490b2b3a4d876d2d40a41c717e0e303 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 31 41 5.1E-5 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 BUMPUSDA_RS02975 1490b2b3a4d876d2d40a41c717e0e303 325 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 2 325 54.066 T 23-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 BUMPUSDA_RS02975 1490b2b3a4d876d2d40a41c717e0e303 325 Gene3D G3DSA:3.30.930.10 12 320 3.6E-69 T 23-04-2016 BUMPUSDA_RS02975 1490b2b3a4d876d2d40a41c717e0e303 325 SUPERFAMILY SSF55681 11 320 4.79E-76 T 23-04-2016 BUMPUSDA_RS02975 1490b2b3a4d876d2d40a41c717e0e303 325 Pfam PF00152 tRNA synthetases class II (D, K and N) 14 321 8.1E-46 T 23-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS02975 1490b2b3a4d876d2d40a41c717e0e303 325 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 17 320 8.2E-117 T 23-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 BUMPUSDA_RS02975 1490b2b3a4d876d2d40a41c717e0e303 325 PANTHER PTHR22594:SF7 12 324 1.2E-115 T 23-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 BUMPUSDA_RS00500 adfac44b4f50bfb610cfa7e3c0740d9f 434 PANTHER PTHR21256:SF14 6 433 9.1E-226 T 23-04-2016 BUMPUSDA_RS00500 adfac44b4f50bfb610cfa7e3c0740d9f 434 PRINTS PR00083 Histidinol dehydrogenase signature 137 163 1.2E-94 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 BUMPUSDA_RS00500 adfac44b4f50bfb610cfa7e3c0740d9f 434 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 1.2E-94 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 BUMPUSDA_RS00500 adfac44b4f50bfb610cfa7e3c0740d9f 434 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 1.2E-94 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 BUMPUSDA_RS00500 adfac44b4f50bfb610cfa7e3c0740d9f 434 PRINTS PR00083 Histidinol dehydrogenase signature 361 379 1.2E-94 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 BUMPUSDA_RS00500 adfac44b4f50bfb610cfa7e3c0740d9f 434 PRINTS PR00083 Histidinol dehydrogenase signature 36 60 1.2E-94 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 BUMPUSDA_RS00500 adfac44b4f50bfb610cfa7e3c0740d9f 434 PRINTS PR00083 Histidinol dehydrogenase signature 198 223 1.2E-94 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 BUMPUSDA_RS00500 adfac44b4f50bfb610cfa7e3c0740d9f 434 PRINTS PR00083 Histidinol dehydrogenase signature 168 194 1.2E-94 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 BUMPUSDA_RS00500 adfac44b4f50bfb610cfa7e3c0740d9f 434 PRINTS PR00083 Histidinol dehydrogenase signature 320 345 1.2E-94 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 BUMPUSDA_RS00500 adfac44b4f50bfb610cfa7e3c0740d9f 434 Gene3D G3DSA:3.40.50.1980 30 240 1.6E-75 T 23-04-2016 BUMPUSDA_RS00500 adfac44b4f50bfb610cfa7e3c0740d9f 434 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 8 427 39.385 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 BUMPUSDA_RS00500 adfac44b4f50bfb610cfa7e3c0740d9f 434 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 36 426 3.0E-153 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 BUMPUSDA_RS00500 adfac44b4f50bfb610cfa7e3c0740d9f 434 PANTHER PTHR21256 6 433 9.1E-226 T 23-04-2016 BUMPUSDA_RS00500 adfac44b4f50bfb610cfa7e3c0740d9f 434 Pfam PF00815 Histidinol dehydrogenase 24 427 3.4E-156 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 BUMPUSDA_RS00500 adfac44b4f50bfb610cfa7e3c0740d9f 434 SUPERFAMILY SSF53720 9 428 6.28E-81 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 BUMPUSDA_RS00500 adfac44b4f50bfb610cfa7e3c0740d9f 434 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 23-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 BUMPUSDA_RS00500 adfac44b4f50bfb610cfa7e3c0740d9f 434 PIRSF PIRSF000099 3 430 7.3E-153 T 23-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 BUMPUSDA_RS03020 0a2e6e7ff5f3b4fc71da2939f9454818 314 PRINTS PR00151 Porphobilinogen deaminase signature 76 95 3.5E-43 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 BUMPUSDA_RS03020 0a2e6e7ff5f3b4fc71da2939f9454818 314 PRINTS PR00151 Porphobilinogen deaminase signature 143 160 3.5E-43 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 BUMPUSDA_RS03020 0a2e6e7ff5f3b4fc71da2939f9454818 314 PRINTS PR00151 Porphobilinogen deaminase signature 124 141 3.5E-43 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 BUMPUSDA_RS03020 0a2e6e7ff5f3b4fc71da2939f9454818 314 PRINTS PR00151 Porphobilinogen deaminase signature 45 65 3.5E-43 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 BUMPUSDA_RS03020 0a2e6e7ff5f3b4fc71da2939f9454818 314 PRINTS PR00151 Porphobilinogen deaminase signature 230 247 3.5E-43 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 BUMPUSDA_RS03020 0a2e6e7ff5f3b4fc71da2939f9454818 314 PANTHER PTHR11557 1 312 1.7E-136 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 BUMPUSDA_RS03020 0a2e6e7ff5f3b4fc71da2939f9454818 314 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 6 297 1.7E-102 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 BUMPUSDA_RS03020 0a2e6e7ff5f3b4fc71da2939f9454818 314 SUPERFAMILY SSF54782 220 308 2.22E-24 T 23-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 BUMPUSDA_RS03020 0a2e6e7ff5f3b4fc71da2939f9454818 314 SUPERFAMILY SSF53850 4 218 4.62E-77 T 23-04-2016 BUMPUSDA_RS03020 0a2e6e7ff5f3b4fc71da2939f9454818 314 Gene3D G3DSA:3.40.190.10 2 110 1.9E-41 T 23-04-2016 BUMPUSDA_RS03020 0a2e6e7ff5f3b4fc71da2939f9454818 314 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 295 8.6E-18 T 23-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 BUMPUSDA_RS03020 0a2e6e7ff5f3b4fc71da2939f9454818 314 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 6 212 6.5E-69 T 23-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 BUMPUSDA_RS03020 0a2e6e7ff5f3b4fc71da2939f9454818 314 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 231 247 - T 23-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 BUMPUSDA_RS03020 0a2e6e7ff5f3b4fc71da2939f9454818 314 Gene3D G3DSA:3.30.160.40 223 304 1.0E-21 T 23-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 BUMPUSDA_RS03020 0a2e6e7ff5f3b4fc71da2939f9454818 314 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 5 297 36.681 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 BUMPUSDA_RS03020 0a2e6e7ff5f3b4fc71da2939f9454818 314 PIRSF PIRSF001438 1 311 1.9E-109 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 BUMPUSDA_RS03020 0a2e6e7ff5f3b4fc71da2939f9454818 314 Gene3D G3DSA:3.40.190.10 111 199 3.1E-35 T 23-04-2016 BUMPUSDA_RS00165 c55c0f6a2f5190f491dcdff95060d3c1 90 PANTHER PTHR33175 1 90 1.9E-44 T 23-04-2016 BUMPUSDA_RS00165 c55c0f6a2f5190f491dcdff95060d3c1 90 PANTHER PTHR33175:SF4 1 90 1.9E-44 T 23-04-2016 BUMPUSDA_RS00165 c55c0f6a2f5190f491dcdff95060d3c1 90 SMART SM00411 1 90 4.8E-38 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 BUMPUSDA_RS00165 c55c0f6a2f5190f491dcdff95060d3c1 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 3.1E-32 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 BUMPUSDA_RS00165 c55c0f6a2f5190f491dcdff95060d3c1 90 Gene3D G3DSA:4.10.520.10 1 90 3.0E-34 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 BUMPUSDA_RS00165 c55c0f6a2f5190f491dcdff95060d3c1 90 SUPERFAMILY SSF47729 1 90 1.91E-31 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 BUMPUSDA_RS00165 c55c0f6a2f5190f491dcdff95060d3c1 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 23-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 BUMPUSDA_RS00165 c55c0f6a2f5190f491dcdff95060d3c1 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 9.8E-18 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 BUMPUSDA_RS00165 c55c0f6a2f5190f491dcdff95060d3c1 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 9.8E-18 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 BUMPUSDA_RS00165 c55c0f6a2f5190f491dcdff95060d3c1 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 9.8E-18 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 BUMPUSDA_RS02140 fd2300ed9be2640af0964915767ced17 238 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 13 230 1.3E-66 T 23-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 BUMPUSDA_RS02140 fd2300ed9be2640af0964915767ced17 238 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 11 231 1.6E-66 T 23-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 BUMPUSDA_RS02140 fd2300ed9be2640af0964915767ced17 238 PANTHER PTHR32125 8 233 7.0E-70 T 23-04-2016 BUMPUSDA_RS02140 fd2300ed9be2640af0964915767ced17 238 PANTHER PTHR32125:SF4 8 233 7.0E-70 T 23-04-2016 BUMPUSDA_RS02140 fd2300ed9be2640af0964915767ced17 238 Gene3D G3DSA:3.90.550.10 9 234 1.1E-66 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases BUMPUSDA_RS02140 fd2300ed9be2640af0964915767ced17 238 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 10 233 29.659 T 23-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 BUMPUSDA_RS02140 fd2300ed9be2640af0964915767ced17 238 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 105 112 - T 23-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 BUMPUSDA_RS02140 fd2300ed9be2640af0964915767ced17 238 SUPERFAMILY SSF53448 10 231 3.03E-60 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases BUMPUSDA_RS03050 42c9b0da6d4626d168fedd7e8542759e 108 PRINTS PR00421 Thioredoxin family signature 23 31 5.6E-8 T 23-04-2016 BUMPUSDA_RS03050 42c9b0da6d4626d168fedd7e8542759e 108 PRINTS PR00421 Thioredoxin family signature 71 82 5.6E-8 T 23-04-2016 BUMPUSDA_RS03050 42c9b0da6d4626d168fedd7e8542759e 108 PRINTS PR00421 Thioredoxin family signature 31 40 5.6E-8 T 23-04-2016 BUMPUSDA_RS03050 42c9b0da6d4626d168fedd7e8542759e 108 Gene3D G3DSA:3.40.30.10 2 107 1.6E-37 T 23-04-2016 IPR012336 Thioredoxin-like fold BUMPUSDA_RS03050 42c9b0da6d4626d168fedd7e8542759e 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 8 106 1.0E-35 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 BUMPUSDA_RS03050 42c9b0da6d4626d168fedd7e8542759e 108 SUPERFAMILY SSF52833 2 107 1.09E-34 T 23-04-2016 IPR012336 Thioredoxin-like fold BUMPUSDA_RS03050 42c9b0da6d4626d168fedd7e8542759e 108 Pfam PF00085 Thioredoxin 4 105 1.2E-30 T 23-04-2016 IPR013766 Thioredoxin domain GO:0045454 BUMPUSDA_RS03050 42c9b0da6d4626d168fedd7e8542759e 108 PIRSF PIRSF000077 1 107 7.9E-40 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 BUMPUSDA_RS03050 42c9b0da6d4626d168fedd7e8542759e 108 PANTHER PTHR10438 2 108 1.7E-32 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 BUMPUSDA_RS02595 b5056b6175fe0aeab47ca3183ce6723b 178 PRINTS PR00059 Ribosomal protein L6 signature 100 116 5.35E-29 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 BUMPUSDA_RS02595 b5056b6175fe0aeab47ca3183ce6723b 178 PRINTS PR00059 Ribosomal protein L6 signature 142 163 5.35E-29 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 BUMPUSDA_RS02595 b5056b6175fe0aeab47ca3183ce6723b 178 PRINTS PR00059 Ribosomal protein L6 signature 71 96 5.35E-29 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 BUMPUSDA_RS02595 b5056b6175fe0aeab47ca3183ce6723b 178 PANTHER PTHR11655 1 177 2.0E-71 T 23-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 BUMPUSDA_RS02595 b5056b6175fe0aeab47ca3183ce6723b 178 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 155 163 - T 23-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02595 b5056b6175fe0aeab47ca3183ce6723b 178 PANTHER PTHR11655:SF14 1 177 2.0E-71 T 23-04-2016 BUMPUSDA_RS02595 b5056b6175fe0aeab47ca3183ce6723b 178 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 177 1.5E-63 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 BUMPUSDA_RS02595 b5056b6175fe0aeab47ca3183ce6723b 178 Pfam PF00347 Ribosomal protein L6 11 81 9.7E-11 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 BUMPUSDA_RS02595 b5056b6175fe0aeab47ca3183ce6723b 178 Pfam PF00347 Ribosomal protein L6 91 165 1.3E-16 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 BUMPUSDA_RS02595 b5056b6175fe0aeab47ca3183ce6723b 178 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 177 32.859 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 BUMPUSDA_RS02595 b5056b6175fe0aeab47ca3183ce6723b 178 SUPERFAMILY SSF56053 1 81 2.04E-18 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 BUMPUSDA_RS02595 b5056b6175fe0aeab47ca3183ce6723b 178 Gene3D G3DSA:3.90.930.12 2 81 1.5E-21 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 BUMPUSDA_RS02595 b5056b6175fe0aeab47ca3183ce6723b 178 Gene3D G3DSA:3.90.930.12 83 178 8.5E-37 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 BUMPUSDA_RS02595 b5056b6175fe0aeab47ca3183ce6723b 178 PIRSF PIRSF002162 1 178 3.2E-48 T 23-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 BUMPUSDA_RS02595 b5056b6175fe0aeab47ca3183ce6723b 178 SUPERFAMILY SSF56053 83 178 1.27E-32 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 BUMPUSDA_RS00605 f9f2868d1ff1ce8bb31fbfe12a04c0be 422 SUPERFAMILY SSF55174 327 422 2.62E-13 T 23-04-2016 BUMPUSDA_RS00605 f9f2868d1ff1ce8bb31fbfe12a04c0be 422 Gene3D G3DSA:1.10.240.10 238 321 2.0E-32 T 23-04-2016 BUMPUSDA_RS00605 f9f2868d1ff1ce8bb31fbfe12a04c0be 422 PANTHER PTHR11766 5 422 4.8E-161 T 23-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 BUMPUSDA_RS00605 f9f2868d1ff1ce8bb31fbfe12a04c0be 422 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 421 2.4E-111 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 BUMPUSDA_RS00605 f9f2868d1ff1ce8bb31fbfe12a04c0be 422 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 221 233 1.5E-29 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 BUMPUSDA_RS00605 f9f2868d1ff1ce8bb31fbfe12a04c0be 422 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 188 210 1.5E-29 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 BUMPUSDA_RS00605 f9f2868d1ff1ce8bb31fbfe12a04c0be 422 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.5E-29 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 BUMPUSDA_RS00605 f9f2868d1ff1ce8bb31fbfe12a04c0be 422 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 167 182 1.5E-29 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 BUMPUSDA_RS00605 f9f2868d1ff1ce8bb31fbfe12a04c0be 422 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 4 422 41.711 T 23-04-2016 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 BUMPUSDA_RS00605 f9f2868d1ff1ce8bb31fbfe12a04c0be 422 Gene3D G3DSA:3.10.290.10 322 422 5.4E-19 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 BUMPUSDA_RS00605 f9f2868d1ff1ce8bb31fbfe12a04c0be 422 Gene3D G3DSA:3.40.50.620 5 237 1.9E-91 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BUMPUSDA_RS00605 f9f2868d1ff1ce8bb31fbfe12a04c0be 422 Pfam PF00579 tRNA synthetases class I (W and Y) 32 326 2.6E-74 T 23-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS00605 f9f2868d1ff1ce8bb31fbfe12a04c0be 422 SUPERFAMILY SSF52374 5 328 5.06E-90 T 23-04-2016 BUMPUSDA_RS00605 f9f2868d1ff1ce8bb31fbfe12a04c0be 422 PANTHER PTHR11766:SF0 5 422 4.8E-161 T 23-04-2016 BUMPUSDA_RS00150 82a2852e2a00da38885815f60370b01b 301 Gene3D G3DSA:1.10.10.10 1 86 2.4E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain BUMPUSDA_RS00150 82a2852e2a00da38885815f60370b01b 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.1E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BUMPUSDA_RS00150 82a2852e2a00da38885815f60370b01b 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.1E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BUMPUSDA_RS00150 82a2852e2a00da38885815f60370b01b 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.1E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BUMPUSDA_RS00150 82a2852e2a00da38885815f60370b01b 301 PANTHER PTHR30126 1 299 1.3E-147 T 23-04-2016 BUMPUSDA_RS00150 82a2852e2a00da38885815f60370b01b 301 Gene3D G3DSA:3.40.190.10 177 256 4.0E-12 T 23-04-2016 BUMPUSDA_RS00150 82a2852e2a00da38885815f60370b01b 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.6E-14 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BUMPUSDA_RS00150 82a2852e2a00da38885815f60370b01b 301 Pfam PF03466 LysR substrate binding domain 89 287 6.0E-32 T 23-04-2016 IPR005119 LysR, substrate-binding BUMPUSDA_RS00150 82a2852e2a00da38885815f60370b01b 301 SUPERFAMILY SSF53850 90 287 1.35E-30 T 23-04-2016 BUMPUSDA_RS00150 82a2852e2a00da38885815f60370b01b 301 Gene3D G3DSA:3.40.190.10 99 176 2.5E-8 T 23-04-2016 BUMPUSDA_RS00150 82a2852e2a00da38885815f60370b01b 301 SUPERFAMILY SSF46785 2 81 6.12E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain BUMPUSDA_RS00150 82a2852e2a00da38885815f60370b01b 301 PANTHER PTHR30126:SF25 1 299 1.3E-147 T 23-04-2016 BUMPUSDA_RS00625 72582274448b40c5f77faf294f63e870 642 Pfam PF03129 Anticodon binding domain 541 630 7.5E-18 T 23-04-2016 IPR004154 Anticodon-binding BUMPUSDA_RS00625 72582274448b40c5f77faf294f63e870 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 31.201 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BUMPUSDA_RS00625 72582274448b40c5f77faf294f63e870 642 Gene3D G3DSA:3.10.20.30 1 64 8.3E-7 T 23-04-2016 IPR012675 Beta-grasp domain BUMPUSDA_RS00625 72582274448b40c5f77faf294f63e870 642 Gene3D G3DSA:3.30.980.10 67 129 5.6E-24 T 23-04-2016 BUMPUSDA_RS00625 72582274448b40c5f77faf294f63e870 642 Gene3D G3DSA:3.30.980.10 188 223 5.6E-24 T 23-04-2016 BUMPUSDA_RS00625 72582274448b40c5f77faf294f63e870 642 Gene3D G3DSA:3.30.54.20 131 184 3.1E-10 T 23-04-2016 BUMPUSDA_RS00625 72582274448b40c5f77faf294f63e870 642 Gene3D G3DSA:3.40.50.800 531 636 9.8E-31 T 23-04-2016 IPR004154 Anticodon-binding BUMPUSDA_RS00625 72582274448b40c5f77faf294f63e870 642 SMART SM00863 170 219 9.1E-11 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 BUMPUSDA_RS00625 72582274448b40c5f77faf294f63e870 642 PANTHER PTHR11451 1 642 4.3E-287 T 23-04-2016 BUMPUSDA_RS00625 72582274448b40c5f77faf294f63e870 642 PANTHER PTHR11451:SF31 1 642 4.3E-287 T 23-04-2016 BUMPUSDA_RS00625 72582274448b40c5f77faf294f63e870 642 SUPERFAMILY SSF55681 243 526 3.78E-89 T 23-04-2016 BUMPUSDA_RS00625 72582274448b40c5f77faf294f63e870 642 SUPERFAMILY SSF52954 531 632 2.11E-26 T 23-04-2016 IPR004154 Anticodon-binding BUMPUSDA_RS00625 72582274448b40c5f77faf294f63e870 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 1.3E-53 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BUMPUSDA_RS00625 72582274448b40c5f77faf294f63e870 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 1.3E-53 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BUMPUSDA_RS00625 72582274448b40c5f77faf294f63e870 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 1.3E-53 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BUMPUSDA_RS00625 72582274448b40c5f77faf294f63e870 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 1.3E-53 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BUMPUSDA_RS00625 72582274448b40c5f77faf294f63e870 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 1.3E-53 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BUMPUSDA_RS00625 72582274448b40c5f77faf294f63e870 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 322 528 1.6E-46 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS00625 72582274448b40c5f77faf294f63e870 642 SUPERFAMILY SSF55186 64 241 4.06E-46 T 23-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 BUMPUSDA_RS00625 72582274448b40c5f77faf294f63e870 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 170 219 4.1E-5 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 BUMPUSDA_RS00625 72582274448b40c5f77faf294f63e870 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 73 631 7.8E-201 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BUMPUSDA_RS00625 72582274448b40c5f77faf294f63e870 642 Gene3D G3DSA:3.30.930.10 242 529 3.8E-115 T 23-04-2016 BUMPUSDA_RS02810 17e6448b4fe3160020e8a52e699dd313 239 SUPERFAMILY SSF53335 54 236 1.03E-20 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BUMPUSDA_RS02810 17e6448b4fe3160020e8a52e699dd313 239 PANTHER PTHR23417 5 236 2.5E-60 T 23-04-2016 BUMPUSDA_RS02810 17e6448b4fe3160020e8a52e699dd313 239 Pfam PF02390 Putative methyltransferase 64 233 5.2E-52 T 23-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 BUMPUSDA_RS02810 17e6448b4fe3160020e8a52e699dd313 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 49 236 2.9E-53 T 23-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 BUMPUSDA_RS02810 17e6448b4fe3160020e8a52e699dd313 239 PANTHER PTHR23417:SF14 5 236 2.5E-60 T 23-04-2016 BUMPUSDA_RS02810 17e6448b4fe3160020e8a52e699dd313 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 24 238 28.197 T 23-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 BUMPUSDA_RS02725 4b998fba661ae91f5ac03fd87091ccc6 389 PANTHER PTHR23514 1 378 1.4E-69 T 23-04-2016 BUMPUSDA_RS02725 4b998fba661ae91f5ac03fd87091ccc6 389 PANTHER PTHR23514:SF3 1 378 1.4E-69 T 23-04-2016 BUMPUSDA_RS02725 4b998fba661ae91f5ac03fd87091ccc6 389 SUPERFAMILY SSF103473 7 384 1.57E-37 T 23-04-2016 IPR020846 Major facilitator superfamily domain BUMPUSDA_RS02725 4b998fba661ae91f5ac03fd87091ccc6 389 Gene3D G3DSA:1.20.1250.20 9 189 1.1E-16 T 23-04-2016 BUMPUSDA_RS02725 4b998fba661ae91f5ac03fd87091ccc6 389 Hamap MF_01044 Protein TsgA [tsgA]. 1 388 28.687 T 23-04-2016 IPR023528 Major facilitator superfamily transporter, TsgA BUMPUSDA_RS02725 4b998fba661ae91f5ac03fd87091ccc6 389 Pfam PF07690 Major Facilitator Superfamily 14 320 9.5E-21 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BUMPUSDA_RS02725 4b998fba661ae91f5ac03fd87091ccc6 389 Gene3D G3DSA:1.20.1250.20 204 385 7.2E-13 T 23-04-2016 BUMPUSDA_RS00010 959f250701bcac02544d6609a670743f 274 SUPERFAMILY SSF81336 97 266 1.2E-46 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 BUMPUSDA_RS00010 959f250701bcac02544d6609a670743f 274 Hamap MF_01393 ATP synthase subunit a [atpB]. 13 272 15.309 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 BUMPUSDA_RS00010 959f250701bcac02544d6609a670743f 274 Gene3D G3DSA:1.20.120.220 98 272 1.9E-54 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 BUMPUSDA_RS00010 959f250701bcac02544d6609a670743f 274 Pfam PF00119 ATP synthase A chain 48 266 1.2E-50 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 BUMPUSDA_RS00010 959f250701bcac02544d6609a670743f 274 ProSitePatterns PS00449 ATP synthase a subunit signature. 207 216 - T 23-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site BUMPUSDA_RS00010 959f250701bcac02544d6609a670743f 274 PANTHER PTHR11410:SF7 139 274 7.1E-89 T 23-04-2016 BUMPUSDA_RS00010 959f250701bcac02544d6609a670743f 274 PANTHER PTHR11410:SF7 1 123 7.1E-89 T 23-04-2016 BUMPUSDA_RS00010 959f250701bcac02544d6609a670743f 274 PRINTS PR00123 ATP synthase A subunit signature 105 121 1.1E-14 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 BUMPUSDA_RS00010 959f250701bcac02544d6609a670743f 274 PRINTS PR00123 ATP synthase A subunit signature 204 226 1.1E-14 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 BUMPUSDA_RS00010 959f250701bcac02544d6609a670743f 274 PRINTS PR00123 ATP synthase A subunit signature 252 267 1.1E-14 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 BUMPUSDA_RS00010 959f250701bcac02544d6609a670743f 274 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 38 267 4.2E-39 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 BUMPUSDA_RS00010 959f250701bcac02544d6609a670743f 274 PANTHER PTHR11410 139 274 7.1E-89 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 BUMPUSDA_RS00010 959f250701bcac02544d6609a670743f 274 PANTHER PTHR11410 1 123 7.1E-89 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 BUMPUSDA_RS02665 6e9d11c2d25eb5fd3686a5f2de5f6898 201 Gene3D G3DSA:3.40.1370.10 53 200 1.8E-54 T 23-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02665 6e9d11c2d25eb5fd3686a5f2de5f6898 201 SUPERFAMILY SSF52166 8 200 9.81E-70 T 23-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02665 6e9d11c2d25eb5fd3686a5f2de5f6898 201 Pfam PF00573 Ribosomal protein L4/L1 family 14 198 3.9E-63 T 23-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02665 6e9d11c2d25eb5fd3686a5f2de5f6898 201 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 13 198 5.2E-71 T 23-04-2016 IPR013005 50S ribosomal protein uL4 BUMPUSDA_RS02665 6e9d11c2d25eb5fd3686a5f2de5f6898 201 PANTHER PTHR10746 11 200 1.4E-80 T 23-04-2016 IPR013005 50S ribosomal protein uL4 BUMPUSDA_RS02665 6e9d11c2d25eb5fd3686a5f2de5f6898 201 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 201 32.532 T 23-04-2016 IPR013005 50S ribosomal protein uL4 BUMPUSDA_RS02590 b7a62dedd15d1e4d36df9eae6f7e4e90 122 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 7 122 24.559 T 23-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02590 b7a62dedd15d1e4d36df9eae6f7e4e90 122 Gene3D G3DSA:3.30.420.100 28 122 1.7E-34 T 23-04-2016 BUMPUSDA_RS02590 b7a62dedd15d1e4d36df9eae6f7e4e90 122 SUPERFAMILY SSF53137 9 120 5.67E-47 T 23-04-2016 BUMPUSDA_RS02590 b7a62dedd15d1e4d36df9eae6f7e4e90 122 PANTHER PTHR12899 30 122 1.5E-39 T 23-04-2016 BUMPUSDA_RS02590 b7a62dedd15d1e4d36df9eae6f7e4e90 122 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 8 122 4.6E-37 T 23-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02590 b7a62dedd15d1e4d36df9eae6f7e4e90 122 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 11 122 2.1E-36 T 23-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02165 5f67ed1b16d29bcf722b9ba52b47edbc 456 PIRSF PIRSF036426 1 456 2.2E-190 T 23-04-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 BUMPUSDA_RS02165 5f67ed1b16d29bcf722b9ba52b47edbc 456 SUPERFAMILY SSF51735 2 113 3.26E-24 T 23-04-2016 IPR016040 NAD(P)-binding domain BUMPUSDA_RS02165 5f67ed1b16d29bcf722b9ba52b47edbc 456 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 217 426 4.8E-44 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 BUMPUSDA_RS02165 5f67ed1b16d29bcf722b9ba52b47edbc 456 Gene3D G3DSA:3.40.50.720 2 112 1.8E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain BUMPUSDA_RS02165 5f67ed1b16d29bcf722b9ba52b47edbc 456 PANTHER PTHR21091:SF16 164 426 2.4E-74 T 23-04-2016 BUMPUSDA_RS02165 5f67ed1b16d29bcf722b9ba52b47edbc 456 Gene3D G3DSA:1.10.8.210 151 208 1.1E-17 T 23-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 BUMPUSDA_RS02165 5f67ed1b16d29bcf722b9ba52b47edbc 456 Pfam PF10414 Sirohaem synthase dimerisation region 150 203 3.4E-16 T 23-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 BUMPUSDA_RS02165 5f67ed1b16d29bcf722b9ba52b47edbc 456 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 215 447 7.2E-85 T 23-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 BUMPUSDA_RS02165 5f67ed1b16d29bcf722b9ba52b47edbc 456 Gene3D G3DSA:3.40.1010.10 214 330 2.8E-45 T 23-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 BUMPUSDA_RS02165 5f67ed1b16d29bcf722b9ba52b47edbc 456 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 206 1.6E-80 T 23-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 BUMPUSDA_RS02165 5f67ed1b16d29bcf722b9ba52b47edbc 456 SUPERFAMILY SSF53790 211 454 4.58E-69 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 BUMPUSDA_RS02165 5f67ed1b16d29bcf722b9ba52b47edbc 456 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 220 234 - T 23-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 BUMPUSDA_RS02165 5f67ed1b16d29bcf722b9ba52b47edbc 456 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 295 328 - T 23-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 BUMPUSDA_RS02165 5f67ed1b16d29bcf722b9ba52b47edbc 456 Gene3D G3DSA:3.30.950.10 336 455 5.4E-36 T 23-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 BUMPUSDA_RS02165 5f67ed1b16d29bcf722b9ba52b47edbc 456 Pfam PF13241 Putative NAD(P)-binding 6 115 4.6E-29 T 23-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 BUMPUSDA_RS02165 5f67ed1b16d29bcf722b9ba52b47edbc 456 SUPERFAMILY SSF75615 114 207 6.67E-26 T 23-04-2016 BUMPUSDA_RS02165 5f67ed1b16d29bcf722b9ba52b47edbc 456 Gene3D G3DSA:3.30.160.110 113 148 6.2E-16 T 23-04-2016 BUMPUSDA_RS02165 5f67ed1b16d29bcf722b9ba52b47edbc 456 PANTHER PTHR21091 164 426 2.4E-74 T 23-04-2016 BUMPUSDA_RS02755 9d6bcf7609db9f926227d294435a9722 237 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 23-04-2016 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 BUMPUSDA_RS02755 9d6bcf7609db9f926227d294435a9722 237 Pfam PF01048 Phosphorylase superfamily 15 212 2.0E-36 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 BUMPUSDA_RS02755 9d6bcf7609db9f926227d294435a9722 237 Gene3D G3DSA:3.40.50.1580 2 233 2.2E-72 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 BUMPUSDA_RS02755 9d6bcf7609db9f926227d294435a9722 237 PANTHER PTHR21234:SF8 3 234 2.0E-60 T 23-04-2016 BUMPUSDA_RS02755 9d6bcf7609db9f926227d294435a9722 237 PANTHER PTHR21234 3 234 2.0E-60 T 23-04-2016 IPR018017 Nucleoside phosphorylase BUMPUSDA_RS02755 9d6bcf7609db9f926227d294435a9722 237 SUPERFAMILY SSF53167 3 234 9.16E-84 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 BUMPUSDA_RS02755 9d6bcf7609db9f926227d294435a9722 237 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 46.595 T 23-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 BUMPUSDA_RS02755 9d6bcf7609db9f926227d294435a9722 237 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 1.1E-99 T 23-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 BUMPUSDA_RS01640 9287033bf8975230dda612397963d115 492 Gene3D G3DSA:3.40.50.720 8 185 2.2E-54 T 23-04-2016 IPR016040 NAD(P)-binding domain BUMPUSDA_RS01640 9287033bf8975230dda612397963d115 492 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 327 353 1.1E-42 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 BUMPUSDA_RS01640 9287033bf8975230dda612397963d115 492 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 166 194 1.1E-42 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 BUMPUSDA_RS01640 9287033bf8975230dda612397963d115 492 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 142 155 1.1E-42 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 BUMPUSDA_RS01640 9287033bf8975230dda612397963d115 492 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 236 252 1.1E-42 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 BUMPUSDA_RS01640 9287033bf8975230dda612397963d115 492 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 218 235 1.1E-42 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 BUMPUSDA_RS01640 9287033bf8975230dda612397963d115 492 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 13 186 3.5E-51 T 23-04-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 BUMPUSDA_RS01640 9287033bf8975230dda612397963d115 492 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 9 490 78.842 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 BUMPUSDA_RS01640 9287033bf8975230dda612397963d115 492 SUPERFAMILY SSF51735 5 189 2.95E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain BUMPUSDA_RS01640 9287033bf8975230dda612397963d115 492 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 176 182 - T 23-04-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 BUMPUSDA_RS01640 9287033bf8975230dda612397963d115 492 PIRSF PIRSF000110 2 492 4.8E-160 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 BUMPUSDA_RS01640 9287033bf8975230dda612397963d115 492 PANTHER PTHR23429:SF0 5 490 5.0E-174 T 23-04-2016 BUMPUSDA_RS01640 9287033bf8975230dda612397963d115 492 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 188 489 4.0E-103 T 23-04-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 BUMPUSDA_RS01640 9287033bf8975230dda612397963d115 492 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 9 490 5.1E-170 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 BUMPUSDA_RS01640 9287033bf8975230dda612397963d115 492 Gene3D G3DSA:3.30.360.10 186 489 6.1E-108 T 23-04-2016 BUMPUSDA_RS01640 9287033bf8975230dda612397963d115 492 PANTHER PTHR23429 5 490 5.0E-174 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 BUMPUSDA_RS01640 9287033bf8975230dda612397963d115 492 SUPERFAMILY SSF55347 176 489 4.58E-103 T 23-04-2016 BUMPUSDA_RS02445 7e1128cfc3a43bd0bff577b613ffe016 580 PANTHER PTHR24221 5 577 9.1E-300 T 23-04-2016 BUMPUSDA_RS02445 7e1128cfc3a43bd0bff577b613ffe016 580 SMART SM00382 367 552 1.2E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain BUMPUSDA_RS02445 7e1128cfc3a43bd0bff577b613ffe016 580 Pfam PF00664 ABC transporter transmembrane region 25 295 3.4E-41 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 BUMPUSDA_RS02445 7e1128cfc3a43bd0bff577b613ffe016 580 Pfam PF00005 ABC transporter 358 506 6.5E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BUMPUSDA_RS02445 7e1128cfc3a43bd0bff577b613ffe016 580 PANTHER PTHR24221:SF256 5 577 9.1E-300 T 23-04-2016 BUMPUSDA_RS02445 7e1128cfc3a43bd0bff577b613ffe016 580 SUPERFAMILY SSF90123 12 325 2.88E-64 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 BUMPUSDA_RS02445 7e1128cfc3a43bd0bff577b613ffe016 580 ProSitePatterns PS00211 ABC transporters family signature. 478 492 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BUMPUSDA_RS02445 7e1128cfc3a43bd0bff577b613ffe016 580 Gene3D G3DSA:3.40.50.300 341 574 3.4E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02445 7e1128cfc3a43bd0bff577b613ffe016 580 Gene3D G3DSA:1.20.1560.10 12 325 1.6E-67 T 23-04-2016 BUMPUSDA_RS02445 7e1128cfc3a43bd0bff577b613ffe016 580 SUPERFAMILY SSF52540 336 576 3.52E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS00585 ecd28aaf2b8dbc0bc346ebaca83f4403 159 PIRSF PIRSF006091 1 149 9.3E-43 T 23-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 BUMPUSDA_RS00585 ecd28aaf2b8dbc0bc346ebaca83f4403 159 SMART SM00900 50 142 2.4E-25 T 23-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 BUMPUSDA_RS00585 ecd28aaf2b8dbc0bc346ebaca83f4403 159 PANTHER PTHR36118:SF1 34 158 2.5E-35 T 23-04-2016 BUMPUSDA_RS00585 ecd28aaf2b8dbc0bc346ebaca83f4403 159 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 7 143 3.6E-46 T 23-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 BUMPUSDA_RS00585 ecd28aaf2b8dbc0bc346ebaca83f4403 159 Pfam PF04205 FMN-binding domain 50 138 5.4E-16 T 23-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 BUMPUSDA_RS00585 ecd28aaf2b8dbc0bc346ebaca83f4403 159 PANTHER PTHR36118 34 158 2.5E-35 T 23-04-2016 BUMPUSDA_RS02350 6fe016f9ff6230b87d8807f1d0295586 207 Pfam PF01872 RibD C-terminal domain 2 198 5.9E-38 T 23-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 BUMPUSDA_RS02350 6fe016f9ff6230b87d8807f1d0295586 207 Gene3D G3DSA:3.40.430.10 2 203 1.1E-42 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain BUMPUSDA_RS02350 6fe016f9ff6230b87d8807f1d0295586 207 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 1 200 2.6E-48 T 23-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 BUMPUSDA_RS02350 6fe016f9ff6230b87d8807f1d0295586 207 SUPERFAMILY SSF53597 2 201 8.47E-40 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain BUMPUSDA_RS02350 6fe016f9ff6230b87d8807f1d0295586 207 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 1 201 4.2E-50 T 23-04-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 BUMPUSDA_RS00030 0531f8a50d40db6f11ffdf823cae4347 512 Gene3D G3DSA:2.40.30.20 2 93 1.7E-26 T 23-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BUMPUSDA_RS00030 0531f8a50d40db6f11ffdf823cae4347 512 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 92 2.9E-7 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BUMPUSDA_RS00030 0531f8a50d40db6f11ffdf823cae4347 512 PANTHER PTHR15184:SF3 1 496 5.3E-271 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BUMPUSDA_RS00030 0531f8a50d40db6f11ffdf823cae4347 512 SUPERFAMILY SSF47917 383 510 1.49E-42 T 23-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BUMPUSDA_RS00030 0531f8a50d40db6f11ffdf823cae4347 512 SUPERFAMILY SSF52540 96 381 9.84E-95 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS00030 0531f8a50d40db6f11ffdf823cae4347 512 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 1.7E-40 T 23-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BUMPUSDA_RS00030 0531f8a50d40db6f11ffdf823cae4347 512 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 23-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BUMPUSDA_RS00030 0531f8a50d40db6f11ffdf823cae4347 512 PANTHER PTHR15184 1 496 5.3E-271 T 23-04-2016 BUMPUSDA_RS00030 0531f8a50d40db6f11ffdf823cae4347 512 Gene3D G3DSA:1.20.150.20 383 510 8.2E-42 T 23-04-2016 BUMPUSDA_RS00030 0531f8a50d40db6f11ffdf823cae4347 512 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.048 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BUMPUSDA_RS00030 0531f8a50d40db6f11ffdf823cae4347 512 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 511 6.6E-237 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BUMPUSDA_RS00030 0531f8a50d40db6f11ffdf823cae4347 512 SUPERFAMILY SSF50615 10 94 1.61E-24 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BUMPUSDA_RS00030 0531f8a50d40db6f11ffdf823cae4347 512 Gene3D G3DSA:3.40.50.300 94 382 1.3E-111 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS00030 0531f8a50d40db6f11ffdf823cae4347 512 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 7.5E-74 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BUMPUSDA_RS02260 8caf24865cad6e47dc03f9773cab19ee 836 PANTHER PTHR11946 590 836 1.7E-303 T 23-04-2016 BUMPUSDA_RS02260 8caf24865cad6e47dc03f9773cab19ee 836 PANTHER PTHR11946 447 547 1.7E-303 T 23-04-2016 BUMPUSDA_RS02260 8caf24865cad6e47dc03f9773cab19ee 836 PANTHER PTHR11946 240 431 1.7E-303 T 23-04-2016 BUMPUSDA_RS02260 8caf24865cad6e47dc03f9773cab19ee 836 PANTHER PTHR11946 1 206 1.7E-303 T 23-04-2016 BUMPUSDA_RS02260 8caf24865cad6e47dc03f9773cab19ee 836 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 6 836 1.6E-301 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 BUMPUSDA_RS02260 8caf24865cad6e47dc03f9773cab19ee 836 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 15 170 2.4E-28 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS02260 8caf24865cad6e47dc03f9773cab19ee 836 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 392 549 8.6E-11 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS02260 8caf24865cad6e47dc03f9773cab19ee 836 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 595 632 9.3E-7 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS02260 8caf24865cad6e47dc03f9773cab19ee 836 SUPERFAMILY SSF50677 228 390 2.75E-25 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS02260 8caf24865cad6e47dc03f9773cab19ee 836 PRINTS PR00985 Leucyl-tRNA synthetase signature 461 479 2.9E-47 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 BUMPUSDA_RS02260 8caf24865cad6e47dc03f9773cab19ee 836 PRINTS PR00985 Leucyl-tRNA synthetase signature 500 522 2.9E-47 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 BUMPUSDA_RS02260 8caf24865cad6e47dc03f9773cab19ee 836 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 2.9E-47 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 BUMPUSDA_RS02260 8caf24865cad6e47dc03f9773cab19ee 836 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 2.9E-47 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 BUMPUSDA_RS02260 8caf24865cad6e47dc03f9773cab19ee 836 PRINTS PR00985 Leucyl-tRNA synthetase signature 533 543 2.9E-47 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 BUMPUSDA_RS02260 8caf24865cad6e47dc03f9773cab19ee 836 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 2.9E-47 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 BUMPUSDA_RS02260 8caf24865cad6e47dc03f9773cab19ee 836 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 2.9E-47 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 BUMPUSDA_RS02260 8caf24865cad6e47dc03f9773cab19ee 836 PANTHER PTHR11946:SF7 590 836 1.7E-303 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 BUMPUSDA_RS02260 8caf24865cad6e47dc03f9773cab19ee 836 PANTHER PTHR11946:SF7 447 547 1.7E-303 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 BUMPUSDA_RS02260 8caf24865cad6e47dc03f9773cab19ee 836 PANTHER PTHR11946:SF7 240 431 1.7E-303 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 BUMPUSDA_RS02260 8caf24865cad6e47dc03f9773cab19ee 836 PANTHER PTHR11946:SF7 1 206 1.7E-303 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 BUMPUSDA_RS02260 8caf24865cad6e47dc03f9773cab19ee 836 Gene3D G3DSA:1.10.730.10 624 770 5.7E-41 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS02260 8caf24865cad6e47dc03f9773cab19ee 836 SUPERFAMILY SSF47323 640 836 2.8E-28 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS02260 8caf24865cad6e47dc03f9773cab19ee 836 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS02260 8caf24865cad6e47dc03f9773cab19ee 836 Pfam PF08264 Anticodon-binding domain of tRNA 677 800 5.2E-18 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS02260 8caf24865cad6e47dc03f9773cab19ee 836 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 372 1.6E-47 T 23-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 BUMPUSDA_RS02260 8caf24865cad6e47dc03f9773cab19ee 836 SUPERFAMILY SSF52374 391 643 6.24E-137 T 23-04-2016 BUMPUSDA_RS02260 8caf24865cad6e47dc03f9773cab19ee 836 SUPERFAMILY SSF52374 5 226 6.24E-137 T 23-04-2016 BUMPUSDA_RS02260 8caf24865cad6e47dc03f9773cab19ee 836 Gene3D G3DSA:3.90.740.10 223 399 1.2E-37 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS02260 8caf24865cad6e47dc03f9773cab19ee 836 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 836 20.923 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 BUMPUSDA_RS02260 8caf24865cad6e47dc03f9773cab19ee 836 Gene3D G3DSA:3.40.50.620 594 623 3.1E-143 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BUMPUSDA_RS02260 8caf24865cad6e47dc03f9773cab19ee 836 Gene3D G3DSA:3.40.50.620 400 549 3.1E-143 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BUMPUSDA_RS02260 8caf24865cad6e47dc03f9773cab19ee 836 Gene3D G3DSA:3.40.50.620 3 222 3.1E-143 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BUMPUSDA_RS02650 26c890c0d5e450e860d3cfc759decf5f 92 Pfam PF00203 Ribosomal protein S19 3 83 3.7E-37 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02650 26c890c0d5e450e860d3cfc759decf5f 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.3E-44 T 23-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 BUMPUSDA_RS02650 26c890c0d5e450e860d3cfc759decf5f 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 23-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 BUMPUSDA_RS02650 26c890c0d5e450e860d3cfc759decf5f 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.5E-23 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02650 26c890c0d5e450e860d3cfc759decf5f 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.5E-23 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02650 26c890c0d5e450e860d3cfc759decf5f 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.5E-23 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02650 26c890c0d5e450e860d3cfc759decf5f 92 PIRSF PIRSF002144 1 92 4.0E-33 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02650 26c890c0d5e450e860d3cfc759decf5f 92 SUPERFAMILY SSF54570 3 84 7.59E-35 T 23-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02650 26c890c0d5e450e860d3cfc759decf5f 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.188 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02650 26c890c0d5e450e860d3cfc759decf5f 92 PANTHER PTHR11880 1 88 2.4E-51 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02650 26c890c0d5e450e860d3cfc759decf5f 92 Gene3D G3DSA:3.30.860.10 1 91 4.5E-40 T 23-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS01655 a2cee19541120d476404498689308cf2 221 Pfam PF00814 Glycoprotease family 30 174 1.2E-22 T 23-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 BUMPUSDA_RS01655 a2cee19541120d476404498689308cf2 221 Gene3D G3DSA:3.30.420.40 4 136 4.6E-35 T 23-04-2016 BUMPUSDA_RS01655 a2cee19541120d476404498689308cf2 221 SUPERFAMILY SSF53067 111 204 6.47E-15 T 23-04-2016 BUMPUSDA_RS01655 a2cee19541120d476404498689308cf2 221 SUPERFAMILY SSF53067 4 105 1.08E-25 T 23-04-2016 BUMPUSDA_RS01655 a2cee19541120d476404498689308cf2 221 PANTHER PTHR11735:SF11 1 201 7.0E-41 T 23-04-2016 BUMPUSDA_RS01655 a2cee19541120d476404498689308cf2 221 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 205 5.2E-47 T 23-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 BUMPUSDA_RS01655 a2cee19541120d476404498689308cf2 221 PANTHER PTHR11735 1 201 7.0E-41 T 23-04-2016 BUMPUSDA_RS01465 b37a8dc6d59197990d9c78308e32397f 223 PANTHER PTHR21343:SF13 1 217 4.3E-85 T 23-04-2016 BUMPUSDA_RS01465 b37a8dc6d59197990d9c78308e32397f 223 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 1.1E-52 T 23-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 BUMPUSDA_RS01465 b37a8dc6d59197990d9c78308e32397f 223 Pfam PF13500 AAA domain 4 212 7.7E-33 T 23-04-2016 BUMPUSDA_RS01465 b37a8dc6d59197990d9c78308e32397f 223 PANTHER PTHR21343 1 217 4.3E-85 T 23-04-2016 BUMPUSDA_RS01465 b37a8dc6d59197990d9c78308e32397f 223 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 211 27.207 T 23-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 BUMPUSDA_RS01465 b37a8dc6d59197990d9c78308e32397f 223 Gene3D G3DSA:3.40.50.300 2 215 2.2E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01465 b37a8dc6d59197990d9c78308e32397f 223 PIRSF PIRSF006755 1 222 3.4E-82 T 23-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 BUMPUSDA_RS01465 b37a8dc6d59197990d9c78308e32397f 223 SUPERFAMILY SSF52540 1 214 1.18E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS00680 a6963ff8e154b3936c1913e0889255aa 306 SUPERFAMILY SSF55681 7 291 7.21E-117 T 23-04-2016 BUMPUSDA_RS00680 a6963ff8e154b3936c1913e0889255aa 306 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 112 136 8.4E-62 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BUMPUSDA_RS00680 a6963ff8e154b3936c1913e0889255aa 306 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 138 158 8.4E-62 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BUMPUSDA_RS00680 a6963ff8e154b3936c1913e0889255aa 306 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 60 75 8.4E-62 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BUMPUSDA_RS00680 a6963ff8e154b3936c1913e0889255aa 306 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 81 101 8.4E-62 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BUMPUSDA_RS00680 a6963ff8e154b3936c1913e0889255aa 306 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 161 176 8.4E-62 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BUMPUSDA_RS00680 a6963ff8e154b3936c1913e0889255aa 306 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 252 268 8.4E-62 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BUMPUSDA_RS00680 a6963ff8e154b3936c1913e0889255aa 306 Gene3D G3DSA:3.30.930.10 3 212 3.2E-95 T 23-04-2016 BUMPUSDA_RS00680 a6963ff8e154b3936c1913e0889255aa 306 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 6 292 57.299 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BUMPUSDA_RS00680 a6963ff8e154b3936c1913e0889255aa 306 Gene3D G3DSA:1.20.58.180 214 297 1.3E-26 T 23-04-2016 BUMPUSDA_RS00680 a6963ff8e154b3936c1913e0889255aa 306 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 300 5.9E-141 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BUMPUSDA_RS00680 a6963ff8e154b3936c1913e0889255aa 306 PANTHER PTHR30075 7 304 9.6E-183 T 23-04-2016 BUMPUSDA_RS00680 a6963ff8e154b3936c1913e0889255aa 306 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 8 288 2.2E-135 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BUMPUSDA_RS00060 3c84d94073450a5d9758f254932e5af3 454 Pfam PF00308 Bacterial dnaA protein 120 336 4.2E-94 T 23-04-2016 IPR013317 Chromosomal replication initiator protein DnaA BUMPUSDA_RS00060 3c84d94073450a5d9758f254932e5af3 454 PANTHER PTHR30050 1 453 7.0E-226 T 23-04-2016 BUMPUSDA_RS00060 3c84d94073450a5d9758f254932e5af3 454 SUPERFAMILY SSF48295 350 452 5.75E-37 T 23-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 BUMPUSDA_RS00060 3c84d94073450a5d9758f254932e5af3 454 Gene3D G3DSA:1.10.1750.10 353 453 1.2E-41 T 23-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 BUMPUSDA_RS00060 3c84d94073450a5d9758f254932e5af3 454 SMART SM00382 151 364 1.6E-5 T 23-04-2016 IPR003593 AAA+ ATPase domain BUMPUSDA_RS00060 3c84d94073450a5d9758f254932e5af3 454 PANTHER PTHR30050:SF2 1 453 7.0E-226 T 23-04-2016 BUMPUSDA_RS00060 3c84d94073450a5d9758f254932e5af3 454 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 453 33.284 T 23-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 BUMPUSDA_RS00060 3c84d94073450a5d9758f254932e5af3 454 SUPERFAMILY SSF52540 120 330 1.66E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS00060 3c84d94073450a5d9758f254932e5af3 454 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 250 277 2.8E-53 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like BUMPUSDA_RS00060 3c84d94073450a5d9758f254932e5af3 454 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 184 198 2.8E-53 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like BUMPUSDA_RS00060 3c84d94073450a5d9758f254932e5af3 454 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 412 431 2.8E-53 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like BUMPUSDA_RS00060 3c84d94073450a5d9758f254932e5af3 454 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 152 172 2.8E-53 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like BUMPUSDA_RS00060 3c84d94073450a5d9758f254932e5af3 454 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 216 230 2.8E-53 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like BUMPUSDA_RS00060 3c84d94073450a5d9758f254932e5af3 454 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 363 431 2.8E-31 T 23-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 BUMPUSDA_RS00060 3c84d94073450a5d9758f254932e5af3 454 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 452 4.3E-178 T 23-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 BUMPUSDA_RS00060 3c84d94073450a5d9758f254932e5af3 454 ProSitePatterns PS01008 DnaA protein signature. 412 431 - T 23-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 BUMPUSDA_RS00060 3c84d94073450a5d9758f254932e5af3 454 Gene3D G3DSA:3.40.50.300 108 283 6.0E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS00060 3c84d94073450a5d9758f254932e5af3 454 Gene3D G3DSA:1.10.8.60 285 352 7.8E-28 T 23-04-2016 BUMPUSDA_RS00060 3c84d94073450a5d9758f254932e5af3 454 SMART SM00760 362 431 2.1E-42 T 23-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 BUMPUSDA_RS00060 3c84d94073450a5d9758f254932e5af3 454 Pfam PF11638 DnaA N-terminal domain 5 64 7.9E-17 T 23-04-2016 IPR024633 DnaA N-terminal domain BUMPUSDA_RS02245 eaac84fb664a52a3cbbb2d2623760b0c 439 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 150 170 - T 23-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 BUMPUSDA_RS02245 eaac84fb664a52a3cbbb2d2623760b0c 439 Pfam PF00919 Uncharacterized protein family UPF0004 4 103 5.1E-28 T 23-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 BUMPUSDA_RS02245 eaac84fb664a52a3cbbb2d2623760b0c 439 SUPERFAMILY SSF102114 138 369 3.53E-55 T 23-04-2016 BUMPUSDA_RS02245 eaac84fb664a52a3cbbb2d2623760b0c 439 Gene3D G3DSA:3.80.30.20 145 373 4.4E-72 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe BUMPUSDA_RS02245 eaac84fb664a52a3cbbb2d2623760b0c 439 PANTHER PTHR11918:SF43 1 438 5.6E-190 T 23-04-2016 BUMPUSDA_RS02245 eaac84fb664a52a3cbbb2d2623760b0c 439 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 436 5.3E-147 T 23-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 BUMPUSDA_RS02245 eaac84fb664a52a3cbbb2d2623760b0c 439 Pfam PF04055 Radical SAM superfamily 150 324 8.3E-24 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 BUMPUSDA_RS02245 eaac84fb664a52a3cbbb2d2623760b0c 439 SMART SM00729 146 366 6.6E-54 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 BUMPUSDA_RS02245 eaac84fb664a52a3cbbb2d2623760b0c 439 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 2 439 67.114 T 23-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 BUMPUSDA_RS02245 eaac84fb664a52a3cbbb2d2623760b0c 439 Pfam PF01938 TRAM domain 382 438 4.1E-14 T 23-04-2016 IPR002792 TRAM domain BUMPUSDA_RS02245 eaac84fb664a52a3cbbb2d2623760b0c 439 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 438 5.3E-183 T 23-04-2016 BUMPUSDA_RS02245 eaac84fb664a52a3cbbb2d2623760b0c 439 PANTHER PTHR11918 1 438 5.6E-190 T 23-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein BUMPUSDA_RS02360 920dfaaf7e4690118ada77f0b1a80bf1 609 PANTHER PTHR11624:SF20 235 609 1.3E-280 T 23-04-2016 BUMPUSDA_RS02360 920dfaaf7e4690118ada77f0b1a80bf1 609 PANTHER PTHR11624:SF20 24 218 1.3E-280 T 23-04-2016 BUMPUSDA_RS02360 920dfaaf7e4690118ada77f0b1a80bf1 609 SMART SM00861 307 472 4.0E-65 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain BUMPUSDA_RS02360 920dfaaf7e4690118ada77f0b1a80bf1 609 Gene3D G3DSA:3.40.50.970 322 476 5.6E-33 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold BUMPUSDA_RS02360 920dfaaf7e4690118ada77f0b1a80bf1 609 PANTHER PTHR11624 235 609 1.3E-280 T 23-04-2016 IPR033247 Transketolase family BUMPUSDA_RS02360 920dfaaf7e4690118ada77f0b1a80bf1 609 PANTHER PTHR11624 24 218 1.3E-280 T 23-04-2016 IPR033247 Transketolase family BUMPUSDA_RS02360 920dfaaf7e4690118ada77f0b1a80bf1 609 Pfam PF02780 Transketolase, C-terminal domain 483 599 7.7E-24 T 23-04-2016 IPR033248 Transketolase, C-terminal domain BUMPUSDA_RS02360 920dfaaf7e4690118ada77f0b1a80bf1 609 SUPERFAMILY SSF52518 237 369 1.69E-63 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold BUMPUSDA_RS02360 920dfaaf7e4690118ada77f0b1a80bf1 609 SUPERFAMILY SSF52518 10 201 1.69E-63 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold BUMPUSDA_RS02360 920dfaaf7e4690118ada77f0b1a80bf1 609 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 13 607 7.1E-250 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 BUMPUSDA_RS02360 920dfaaf7e4690118ada77f0b1a80bf1 609 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 608 42.37 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 BUMPUSDA_RS02360 920dfaaf7e4690118ada77f0b1a80bf1 609 ProSitePatterns PS00802 Transketolase signature 2. 413 429 - T 23-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 BUMPUSDA_RS02360 920dfaaf7e4690118ada77f0b1a80bf1 609 Gene3D G3DSA:3.40.50.920 482 604 7.3E-31 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 BUMPUSDA_RS02360 920dfaaf7e4690118ada77f0b1a80bf1 609 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 276 1.3E-100 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 BUMPUSDA_RS02360 920dfaaf7e4690118ada77f0b1a80bf1 609 Gene3D G3DSA:3.40.50.970 236 321 1.4E-62 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold BUMPUSDA_RS02360 920dfaaf7e4690118ada77f0b1a80bf1 609 Gene3D G3DSA:3.40.50.970 24 201 1.4E-62 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold BUMPUSDA_RS02360 920dfaaf7e4690118ada77f0b1a80bf1 609 Pfam PF02779 Transketolase, pyrimidine binding domain 306 468 9.7E-38 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain BUMPUSDA_RS02360 920dfaaf7e4690118ada77f0b1a80bf1 609 SUPERFAMILY SSF52922 479 607 3.01E-27 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 BUMPUSDA_RS02360 920dfaaf7e4690118ada77f0b1a80bf1 609 SUPERFAMILY SSF52518 305 482 7.99E-55 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold BUMPUSDA_RS01225 9d7fa4bdc8543fc9e66a6efa534cb453 579 Gene3D G3DSA:1.10.730.10 457 579 4.2E-29 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS01225 9d7fa4bdc8543fc9e66a6efa534cb453 579 PRINTS PR01038 Arginyl-tRNA synthetase signature 306 327 1.8E-25 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 BUMPUSDA_RS01225 9d7fa4bdc8543fc9e66a6efa534cb453 579 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 1.8E-25 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 BUMPUSDA_RS01225 9d7fa4bdc8543fc9e66a6efa534cb453 579 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 1.8E-25 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 BUMPUSDA_RS01225 9d7fa4bdc8543fc9e66a6efa534cb453 579 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 1.8E-25 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 BUMPUSDA_RS01225 9d7fa4bdc8543fc9e66a6efa534cb453 579 PANTHER PTHR11956 1 579 6.6E-203 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 BUMPUSDA_RS01225 9d7fa4bdc8543fc9e66a6efa534cb453 579 Pfam PF05746 DALR anticodon binding domain 463 579 4.2E-29 T 23-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 BUMPUSDA_RS01225 9d7fa4bdc8543fc9e66a6efa534cb453 579 Hamap MF_00123 Arginine--tRNA ligase [argS]. 1 579 26.274 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 BUMPUSDA_RS01225 9d7fa4bdc8543fc9e66a6efa534cb453 579 SUPERFAMILY SSF47323 457 579 7.85E-32 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS01225 9d7fa4bdc8543fc9e66a6efa534cb453 579 SUPERFAMILY SSF52374 109 457 8.28E-90 T 23-04-2016 BUMPUSDA_RS01225 9d7fa4bdc8543fc9e66a6efa534cb453 579 Gene3D G3DSA:3.30.1360.70 1 101 2.3E-15 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 BUMPUSDA_RS01225 9d7fa4bdc8543fc9e66a6efa534cb453 579 SMART SM00836 463 579 1.9E-26 T 23-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 BUMPUSDA_RS01225 9d7fa4bdc8543fc9e66a6efa534cb453 579 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS01225 9d7fa4bdc8543fc9e66a6efa534cb453 579 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 4 579 1.1E-169 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 BUMPUSDA_RS01225 9d7fa4bdc8543fc9e66a6efa534cb453 579 SUPERFAMILY SSF55190 1 93 9.55E-9 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 BUMPUSDA_RS01225 9d7fa4bdc8543fc9e66a6efa534cb453 579 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 1.0E-11 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 BUMPUSDA_RS01225 9d7fa4bdc8543fc9e66a6efa534cb453 579 Pfam PF00750 tRNA synthetases class I (R) 98 449 3.0E-140 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 BUMPUSDA_RS01225 9d7fa4bdc8543fc9e66a6efa534cb453 579 SMART SM01016 5 87 2.2E-6 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 BUMPUSDA_RS01225 9d7fa4bdc8543fc9e66a6efa534cb453 579 Gene3D G3DSA:3.40.50.620 108 456 2.5E-107 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BUMPUSDA_RS00260 9e7505262a7f7d3b5095d244e5964932 459 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 23-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 BUMPUSDA_RS00260 9e7505262a7f7d3b5095d244e5964932 459 SUPERFAMILY SSF48557 3 456 2.51E-134 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 BUMPUSDA_RS00260 9e7505262a7f7d3b5095d244e5964932 459 Gene3D G3DSA:1.10.40.30 375 432 1.6E-26 T 23-04-2016 BUMPUSDA_RS00260 9e7505262a7f7d3b5095d244e5964932 459 Gene3D G3DSA:1.20.200.10 108 374 2.4E-94 T 23-04-2016 BUMPUSDA_RS00260 9e7505262a7f7d3b5095d244e5964932 459 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 39.034 T 23-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 BUMPUSDA_RS00260 9e7505262a7f7d3b5095d244e5964932 459 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 5.8E-190 T 23-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 BUMPUSDA_RS00260 9e7505262a7f7d3b5095d244e5964932 459 PANTHER PTHR11444 3 456 1.6E-218 T 23-04-2016 IPR000362 Fumarate lyase family BUMPUSDA_RS00260 9e7505262a7f7d3b5095d244e5964932 459 Gene3D G3DSA:1.10.275.10 1 107 5.5E-35 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal BUMPUSDA_RS00260 9e7505262a7f7d3b5095d244e5964932 459 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 2.6E-20 T 23-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 BUMPUSDA_RS00260 9e7505262a7f7d3b5095d244e5964932 459 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 8.3E-65 T 23-04-2016 BUMPUSDA_RS00260 9e7505262a7f7d3b5095d244e5964932 459 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 8.3E-65 T 23-04-2016 BUMPUSDA_RS00260 9e7505262a7f7d3b5095d244e5964932 459 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 8.3E-65 T 23-04-2016 BUMPUSDA_RS00260 9e7505262a7f7d3b5095d244e5964932 459 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 8.3E-65 T 23-04-2016 BUMPUSDA_RS00260 9e7505262a7f7d3b5095d244e5964932 459 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 8.3E-65 T 23-04-2016 BUMPUSDA_RS00260 9e7505262a7f7d3b5095d244e5964932 459 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 8.3E-65 T 23-04-2016 BUMPUSDA_RS00260 9e7505262a7f7d3b5095d244e5964932 459 Pfam PF00206 Lyase 6 301 2.5E-85 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal BUMPUSDA_RS00260 9e7505262a7f7d3b5095d244e5964932 459 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 3.0E-29 T 23-04-2016 IPR000362 Fumarate lyase family BUMPUSDA_RS00260 9e7505262a7f7d3b5095d244e5964932 459 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 3.0E-29 T 23-04-2016 IPR000362 Fumarate lyase family BUMPUSDA_RS00260 9e7505262a7f7d3b5095d244e5964932 459 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 3.0E-29 T 23-04-2016 IPR000362 Fumarate lyase family BUMPUSDA_RS00260 9e7505262a7f7d3b5095d244e5964932 459 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 3.0E-29 T 23-04-2016 IPR000362 Fumarate lyase family BUMPUSDA_RS00260 9e7505262a7f7d3b5095d244e5964932 459 PANTHER PTHR11444:SF3 3 456 1.6E-218 T 23-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 BUMPUSDA_RS00230 8a60f9a291ba6c1af17534acc85e477d 356 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 213 335 1.7E-26 T 23-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 BUMPUSDA_RS00230 8a60f9a291ba6c1af17534acc85e477d 356 Gene3D G3DSA:3.90.78.10 238 342 1.9E-33 T 23-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 BUMPUSDA_RS00230 8a60f9a291ba6c1af17534acc85e477d 356 Pfam PF01565 FAD binding domain 27 155 1.3E-20 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 BUMPUSDA_RS00230 8a60f9a291ba6c1af17534acc85e477d 356 Gene3D G3DSA:3.30.465.10 81 237 2.1E-45 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 BUMPUSDA_RS00230 8a60f9a291ba6c1af17534acc85e477d 356 SUPERFAMILY SSF56194 209 345 5.75E-38 T 23-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 BUMPUSDA_RS00230 8a60f9a291ba6c1af17534acc85e477d 356 PANTHER PTHR21071 1 343 2.1E-124 T 23-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 BUMPUSDA_RS00230 8a60f9a291ba6c1af17534acc85e477d 356 Gene3D G3DSA:3.30.43.10 11 75 3.5E-18 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 BUMPUSDA_RS00230 8a60f9a291ba6c1af17534acc85e477d 356 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 13 336 2.5E-85 T 23-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 BUMPUSDA_RS00230 8a60f9a291ba6c1af17534acc85e477d 356 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 356 67.446 T 23-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 BUMPUSDA_RS00230 8a60f9a291ba6c1af17534acc85e477d 356 SUPERFAMILY SSF56176 12 203 2.62E-44 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 BUMPUSDA_RS00230 8a60f9a291ba6c1af17534acc85e477d 356 PANTHER PTHR21071:SF6 1 343 2.1E-124 T 23-04-2016 BUMPUSDA_RS01555 e5136a948c011f7ec718416b158102cb 251 SUPERFAMILY SSF51351 2 248 4.19E-80 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 BUMPUSDA_RS01555 e5136a948c011f7ec718416b158102cb 251 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 6 238 6.8E-62 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 BUMPUSDA_RS01555 e5136a948c011f7ec718416b158102cb 251 PANTHER PTHR21139 1 247 6.3E-95 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 BUMPUSDA_RS01555 e5136a948c011f7ec718416b158102cb 251 Pfam PF00121 Triosephosphate isomerase 6 247 4.1E-86 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 BUMPUSDA_RS01555 e5136a948c011f7ec718416b158102cb 251 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 250 37.339 T 23-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 BUMPUSDA_RS01555 e5136a948c011f7ec718416b158102cb 251 Gene3D G3DSA:3.20.20.70 1 248 1.9E-85 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 BUMPUSDA_RS01555 e5136a948c011f7ec718416b158102cb 251 ProSitePatterns PS00171 Triosephosphate isomerase active site. 166 176 - T 23-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 BUMPUSDA_RS01440 1a25c5067f5b10c20035518a097c150d 265 Pfam PF00459 Inositol monophosphatase family 2 240 1.8E-32 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 BUMPUSDA_RS01440 1a25c5067f5b10c20035518a097c150d 265 Gene3D G3DSA:3.30.540.10 2 150 3.8E-28 T 23-04-2016 BUMPUSDA_RS01440 1a25c5067f5b10c20035518a097c150d 265 SUPERFAMILY SSF56655 1 262 7.72E-53 T 23-04-2016 BUMPUSDA_RS01440 1a25c5067f5b10c20035518a097c150d 265 Gene3D G3DSA:3.40.190.80 151 261 1.4E-18 T 23-04-2016 BUMPUSDA_RS01440 1a25c5067f5b10c20035518a097c150d 265 PANTHER PTHR20854:SF4 1 235 3.0E-45 T 23-04-2016 BUMPUSDA_RS01440 1a25c5067f5b10c20035518a097c150d 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 178 199 1.9E-21 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 BUMPUSDA_RS01440 1a25c5067f5b10c20035518a097c150d 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 209 233 1.9E-21 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 BUMPUSDA_RS01440 1a25c5067f5b10c20035518a097c150d 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 131 154 1.9E-21 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 BUMPUSDA_RS01440 1a25c5067f5b10c20035518a097c150d 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 82 98 1.9E-21 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 BUMPUSDA_RS01440 1a25c5067f5b10c20035518a097c150d 265 PANTHER PTHR20854 1 235 3.0E-45 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 BUMPUSDA_RS01440 1a25c5067f5b10c20035518a097c150d 265 PRINTS PR01959 SuhB family inositol monophosphatase signature 199 211 5.2E-6 T 23-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 BUMPUSDA_RS01440 1a25c5067f5b10c20035518a097c150d 265 PRINTS PR01959 SuhB family inositol monophosphatase signature 105 124 5.2E-6 T 23-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 BUMPUSDA_RS01030 a2790bc28a45cc34ab8f21b0e2449711 349 SMART SM01240 7 347 2.3E-122 T 23-04-2016 BUMPUSDA_RS01030 a2790bc28a45cc34ab8f21b0e2449711 349 PANTHER PTHR11911 1 163 5.9E-190 T 23-04-2016 BUMPUSDA_RS01030 a2790bc28a45cc34ab8f21b0e2449711 349 PANTHER PTHR11911 181 347 5.9E-190 T 23-04-2016 BUMPUSDA_RS01030 a2790bc28a45cc34ab8f21b0e2449711 349 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 23-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 BUMPUSDA_RS01030 a2790bc28a45cc34ab8f21b0e2449711 349 Hamap MF_00596 GMP reductase [guaC]. 1 345 53.436 T 23-04-2016 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: REACT_1698 BUMPUSDA_RS01030 a2790bc28a45cc34ab8f21b0e2449711 349 Gene3D G3DSA:3.20.20.70 2 341 4.4E-105 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 BUMPUSDA_RS01030 a2790bc28a45cc34ab8f21b0e2449711 349 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 339 2.2E-77 T 23-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 BUMPUSDA_RS01030 a2790bc28a45cc34ab8f21b0e2449711 349 PIRSF PIRSF000235 1 348 1.4E-196 T 23-04-2016 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: REACT_1698 BUMPUSDA_RS01030 a2790bc28a45cc34ab8f21b0e2449711 349 PANTHER PTHR11911:SF66 1 163 5.9E-190 T 23-04-2016 BUMPUSDA_RS01030 a2790bc28a45cc34ab8f21b0e2449711 349 PANTHER PTHR11911:SF66 181 347 5.9E-190 T 23-04-2016 BUMPUSDA_RS01030 a2790bc28a45cc34ab8f21b0e2449711 349 SUPERFAMILY SSF51412 6 337 2.62E-100 T 23-04-2016 BUMPUSDA_RS01030 a2790bc28a45cc34ab8f21b0e2449711 349 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 1.1E-183 T 23-04-2016 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: REACT_1698 BUMPUSDA_RS00355 8389b4d16539bdfb2797d816dcdeb4d5 469 Gene3D G3DSA:1.10.1160.10 233 314 1.6E-28 T 23-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 BUMPUSDA_RS00355 8389b4d16539bdfb2797d816dcdeb4d5 469 Gene3D G3DSA:1.10.10.350 363 461 2.6E-17 T 23-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 BUMPUSDA_RS00355 8389b4d16539bdfb2797d816dcdeb4d5 469 SUPERFAMILY SSF52374 3 296 1.34E-108 T 23-04-2016 BUMPUSDA_RS00355 8389b4d16539bdfb2797d816dcdeb4d5 469 SUPERFAMILY SSF48163 299 461 3.14E-34 T 23-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 BUMPUSDA_RS00355 8389b4d16539bdfb2797d816dcdeb4d5 469 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 461 1.3E-173 T 23-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 BUMPUSDA_RS00355 8389b4d16539bdfb2797d816dcdeb4d5 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 9.7E-27 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 BUMPUSDA_RS00355 8389b4d16539bdfb2797d816dcdeb4d5 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 9.7E-27 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 BUMPUSDA_RS00355 8389b4d16539bdfb2797d816dcdeb4d5 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 9.7E-27 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 BUMPUSDA_RS00355 8389b4d16539bdfb2797d816dcdeb4d5 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 9.7E-27 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 BUMPUSDA_RS00355 8389b4d16539bdfb2797d816dcdeb4d5 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 9.7E-27 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 BUMPUSDA_RS00355 8389b4d16539bdfb2797d816dcdeb4d5 469 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 3 461 32.571 T 23-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 BUMPUSDA_RS00355 8389b4d16539bdfb2797d816dcdeb4d5 469 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 305 8.0E-104 T 23-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 BUMPUSDA_RS00355 8389b4d16539bdfb2797d816dcdeb4d5 469 PANTHER PTHR11451 2 317 2.8E-96 T 23-04-2016 BUMPUSDA_RS00355 8389b4d16539bdfb2797d816dcdeb4d5 469 PANTHER PTHR11451:SF41 2 317 2.8E-96 T 23-04-2016 BUMPUSDA_RS00355 8389b4d16539bdfb2797d816dcdeb4d5 469 Gene3D G3DSA:3.90.800.10 68 180 4.7E-37 T 23-04-2016 BUMPUSDA_RS00355 8389b4d16539bdfb2797d816dcdeb4d5 469 Gene3D G3DSA:3.40.50.620 2 67 4.9E-51 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BUMPUSDA_RS00355 8389b4d16539bdfb2797d816dcdeb4d5 469 Gene3D G3DSA:3.40.50.620 181 230 4.9E-51 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BUMPUSDA_RS01920 2c22e9d47c65769da472ce755b417437 495 SUPERFAMILY SSF69705 1 125 1.44E-39 T 23-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 BUMPUSDA_RS01920 2c22e9d47c65769da472ce755b417437 495 Pfam PF08529 NusA N-terminal domain 4 123 2.4E-34 T 23-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 BUMPUSDA_RS01920 2c22e9d47c65769da472ce755b417437 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 413 2.0E-16 T 23-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication BUMPUSDA_RS01920 2c22e9d47c65769da472ce755b417437 495 SUPERFAMILY SSF54814 202 278 1.96E-28 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 BUMPUSDA_RS01920 2c22e9d47c65769da472ce755b417437 495 SUPERFAMILY SSF50249 133 199 4.57E-16 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS01920 2c22e9d47c65769da472ce755b417437 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 421 27.779 T 23-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 BUMPUSDA_RS01920 2c22e9d47c65769da472ce755b417437 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 1.5E-6 T 23-04-2016 BUMPUSDA_RS01920 2c22e9d47c65769da472ce755b417437 495 SMART SM00316 133 200 3.8E-5 T 23-04-2016 IPR022967 RNA-binding domain, S1 BUMPUSDA_RS01920 2c22e9d47c65769da472ce755b417437 495 SUPERFAMILY SSF54814 279 342 1.18E-14 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 BUMPUSDA_RS01920 2c22e9d47c65769da472ce755b417437 495 Pfam PF13184 NusA-like KH domain 230 297 2.6E-27 T 23-04-2016 IPR025249 KH domain, NusA-like GO:0003723 BUMPUSDA_RS01920 2c22e9d47c65769da472ce755b417437 495 SUPERFAMILY SSF47794 430 492 6.12E-13 T 23-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 BUMPUSDA_RS01920 2c22e9d47c65769da472ce755b417437 495 PANTHER PTHR22648:SF0 1 448 2.4E-167 T 23-04-2016 BUMPUSDA_RS01920 2c22e9d47c65769da472ce755b417437 495 SUPERFAMILY SSF47794 348 414 3.3E-12 T 23-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 BUMPUSDA_RS01920 2c22e9d47c65769da472ce755b417437 495 Gene3D G3DSA:3.30.300.20 278 345 3.5E-25 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta BUMPUSDA_RS01920 2c22e9d47c65769da472ce755b417437 495 Gene3D G3DSA:1.10.150.20 359 413 2.7E-15 T 23-04-2016 BUMPUSDA_RS01920 2c22e9d47c65769da472ce755b417437 495 Gene3D G3DSA:1.10.150.20 433 490 1.2E-17 T 23-04-2016 BUMPUSDA_RS01920 2c22e9d47c65769da472ce755b417437 495 Gene3D G3DSA:2.40.50.140 128 198 5.8E-21 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS01920 2c22e9d47c65769da472ce755b417437 495 Gene3D G3DSA:3.30.1480.10 1 124 1.3E-44 T 23-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 BUMPUSDA_RS01920 2c22e9d47c65769da472ce755b417437 495 Gene3D G3DSA:3.30.300.20 199 277 8.8E-34 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta BUMPUSDA_RS01920 2c22e9d47c65769da472ce755b417437 495 PANTHER PTHR22648 1 448 2.4E-167 T 23-04-2016 BUMPUSDA_RS01920 2c22e9d47c65769da472ce755b417437 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 2.8E-124 T 23-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 BUMPUSDA_RS02600 a63acc4eab70ac37d9c08f4d502db0c6 130 PANTHER PTHR11758 1 130 1.5E-53 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02600 a63acc4eab70ac37d9c08f4d502db0c6 130 Pfam PF00410 Ribosomal protein S8 5 129 9.5E-48 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02600 a63acc4eab70ac37d9c08f4d502db0c6 130 SUPERFAMILY SSF56047 2 129 1.44E-45 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02600 a63acc4eab70ac37d9c08f4d502db0c6 130 Gene3D G3DSA:3.30.1490.10 74 129 5.6E-28 T 23-04-2016 BUMPUSDA_RS02600 a63acc4eab70ac37d9c08f4d502db0c6 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02600 a63acc4eab70ac37d9c08f4d502db0c6 130 Gene3D G3DSA:3.30.1370.30 2 71 5.5E-25 T 23-04-2016 BUMPUSDA_RS02600 a63acc4eab70ac37d9c08f4d502db0c6 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 30.746 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS00160 ce96b6111f90581e81e5ffcbb056c360 525 Gene3D G3DSA:3.40.50.1380 6 188 1.5E-64 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain BUMPUSDA_RS00160 ce96b6111f90581e81e5ffcbb056c360 525 SUPERFAMILY SSF53927 216 525 1.7E-120 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 BUMPUSDA_RS00160 ce96b6111f90581e81e5ffcbb056c360 525 PANTHER PTHR11692:SF2 5 525 4.9E-251 T 23-04-2016 BUMPUSDA_RS00160 ce96b6111f90581e81e5ffcbb056c360 525 SUPERFAMILY SSF52335 7 194 8.11E-58 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain BUMPUSDA_RS00160 ce96b6111f90581e81e5ffcbb056c360 525 SMART SM00798 137 457 7.8E-168 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 BUMPUSDA_RS00160 ce96b6111f90581e81e5ffcbb056c360 525 Pfam PF02142 MGS-like domain 19 132 5.1E-24 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain BUMPUSDA_RS00160 ce96b6111f90581e81e5ffcbb056c360 525 Gene3D G3DSA:3.40.140.20 373 515 1.2E-52 T 23-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 BUMPUSDA_RS00160 ce96b6111f90581e81e5ffcbb056c360 525 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 525 40.495 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 BUMPUSDA_RS00160 ce96b6111f90581e81e5ffcbb056c360 525 SMART SM00851 19 132 3.9E-43 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain BUMPUSDA_RS00160 ce96b6111f90581e81e5ffcbb056c360 525 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 455 1.7E-106 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 BUMPUSDA_RS00160 ce96b6111f90581e81e5ffcbb056c360 525 PANTHER PTHR11692 5 525 4.9E-251 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 BUMPUSDA_RS00160 ce96b6111f90581e81e5ffcbb056c360 525 PIRSF PIRSF000414 3 525 1.3E-207 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 BUMPUSDA_RS00160 ce96b6111f90581e81e5ffcbb056c360 525 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 525 2.9E-196 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 BUMPUSDA_RS00160 ce96b6111f90581e81e5ffcbb056c360 525 Gene3D G3DSA:3.40.140.20 249 368 1.2E-45 T 23-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 BUMPUSDA_RS02085 d70966433f2daafd19e1aa671dee478b 222 SUPERFAMILY SSF100950 1 145 2.42E-43 T 23-04-2016 BUMPUSDA_RS02085 d70966433f2daafd19e1aa671dee478b 222 PANTHER PTHR11934 1 222 3.8E-114 T 23-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 BUMPUSDA_RS02085 d70966433f2daafd19e1aa671dee478b 222 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 31.746 T 23-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 BUMPUSDA_RS02085 d70966433f2daafd19e1aa671dee478b 222 Gene3D G3DSA:3.30.70.260 137 196 9.8E-26 T 23-04-2016 BUMPUSDA_RS02085 d70966433f2daafd19e1aa671dee478b 222 PANTHER PTHR11934:SF11 1 222 3.8E-114 T 23-04-2016 BUMPUSDA_RS02085 d70966433f2daafd19e1aa671dee478b 222 Gene3D G3DSA:3.40.50.1360 2 136 1.4E-51 T 23-04-2016 BUMPUSDA_RS02085 d70966433f2daafd19e1aa671dee478b 222 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 50 213 1.1E-52 T 23-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 BUMPUSDA_RS02085 d70966433f2daafd19e1aa671dee478b 222 SUPERFAMILY SSF75445 127 198 1.44E-21 T 23-04-2016 BUMPUSDA_RS02085 d70966433f2daafd19e1aa671dee478b 222 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 3.1E-61 T 23-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 BUMPUSDA_RS02060 38a41a4b20cf62b56c56b91ee947302f 519 PANTHER PTHR38761 2 515 1.0E-196 T 23-04-2016 BUMPUSDA_RS02060 38a41a4b20cf62b56c56b91ee947302f 519 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 519 167.827 T 23-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 BUMPUSDA_RS02060 38a41a4b20cf62b56c56b91ee947302f 519 SUPERFAMILY SSF55931 4 515 4.64E-172 T 23-04-2016 BUMPUSDA_RS02060 38a41a4b20cf62b56c56b91ee947302f 519 Pfam PF04262 Glutamate-cysteine ligase 10 381 2.7E-151 T 23-04-2016 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 BUMPUSDA_RS02060 38a41a4b20cf62b56c56b91ee947302f 519 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 6 518 1.5E-237 T 23-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 BUMPUSDA_RS00245 9dd3c1999b943538a5d87794c7f756fc 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 146 2.1E-28 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BUMPUSDA_RS00245 9dd3c1999b943538a5d87794c7f756fc 334 Gene3D G3DSA:3.30.360.10 162 308 1.0E-44 T 23-04-2016 BUMPUSDA_RS00245 9dd3c1999b943538a5d87794c7f756fc 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 3.7E-118 T 23-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 BUMPUSDA_RS00245 9dd3c1999b943538a5d87794c7f756fc 334 Gene3D G3DSA:3.40.50.720 1 161 3.6E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain BUMPUSDA_RS00245 9dd3c1999b943538a5d87794c7f756fc 334 PANTHER PTHR32338 1 332 6.3E-133 T 23-04-2016 BUMPUSDA_RS00245 9dd3c1999b943538a5d87794c7f756fc 334 SUPERFAMILY SSF51735 2 180 8.62E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain BUMPUSDA_RS00245 9dd3c1999b943538a5d87794c7f756fc 334 PANTHER PTHR32338:SF8 1 332 6.3E-133 T 23-04-2016 BUMPUSDA_RS00245 9dd3c1999b943538a5d87794c7f756fc 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 34.998 T 23-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 BUMPUSDA_RS00245 9dd3c1999b943538a5d87794c7f756fc 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 23-04-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 BUMPUSDA_RS00245 9dd3c1999b943538a5d87794c7f756fc 334 SUPERFAMILY SSF55347 154 308 2.06E-46 T 23-04-2016 BUMPUSDA_RS00245 9dd3c1999b943538a5d87794c7f756fc 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 163 311 7.2E-12 T 23-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 BUMPUSDA_RS00245 9dd3c1999b943538a5d87794c7f756fc 334 SMART SM00859 3 146 2.5E-35 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BUMPUSDA_RS01400 12ae1982cc17b6b856d0b205a0ecc5e5 269 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 11 263 1.6E-93 T 23-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 BUMPUSDA_RS01400 12ae1982cc17b6b856d0b205a0ecc5e5 269 PANTHER PTHR10314:SF4 19 51 2.1E-18 T 23-04-2016 BUMPUSDA_RS01400 12ae1982cc17b6b856d0b205a0ecc5e5 269 PANTHER PTHR10314:SF4 74 153 2.1E-18 T 23-04-2016 BUMPUSDA_RS01400 12ae1982cc17b6b856d0b205a0ecc5e5 269 SUPERFAMILY SSF51366 1 266 4.43E-84 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 BUMPUSDA_RS01400 12ae1982cc17b6b856d0b205a0ecc5e5 269 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 36.559 T 23-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 BUMPUSDA_RS01400 12ae1982cc17b6b856d0b205a0ecc5e5 269 Gene3D G3DSA:3.20.20.70 1 266 2.1E-85 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 BUMPUSDA_RS01400 12ae1982cc17b6b856d0b205a0ecc5e5 269 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 23-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 BUMPUSDA_RS01400 12ae1982cc17b6b856d0b205a0ecc5e5 269 PANTHER PTHR10314 19 51 2.1E-18 T 23-04-2016 BUMPUSDA_RS01400 12ae1982cc17b6b856d0b205a0ecc5e5 269 PANTHER PTHR10314 74 153 2.1E-18 T 23-04-2016 BUMPUSDA_RS01400 12ae1982cc17b6b856d0b205a0ecc5e5 269 Pfam PF00290 Tryptophan synthase alpha chain 10 265 2.8E-83 T 23-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 BUMPUSDA_RS02020 20d3808f1b0d15e547eb24942e7997e6 147 PIRSF PIRSF001399 3 147 6.0E-57 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 BUMPUSDA_RS02020 20d3808f1b0d15e547eb24942e7997e6 147 Gene3D G3DSA:3.40.50.9100 5 145 9.6E-60 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 BUMPUSDA_RS02020 20d3808f1b0d15e547eb24942e7997e6 147 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 147 61.353 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 BUMPUSDA_RS02020 20d3808f1b0d15e547eb24942e7997e6 147 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 7 144 8.0E-62 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 BUMPUSDA_RS02020 20d3808f1b0d15e547eb24942e7997e6 147 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 23-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 BUMPUSDA_RS02020 20d3808f1b0d15e547eb24942e7997e6 147 Pfam PF01220 Dehydroquinase class II 7 142 2.0E-54 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 BUMPUSDA_RS02020 20d3808f1b0d15e547eb24942e7997e6 147 SUPERFAMILY SSF52304 6 144 1.44E-56 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 BUMPUSDA_RS02020 20d3808f1b0d15e547eb24942e7997e6 147 PANTHER PTHR21272 3 146 2.4E-73 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 BUMPUSDA_RS02020 20d3808f1b0d15e547eb24942e7997e6 147 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 7 144 1.7E-57 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 BUMPUSDA_RS02340 c8763210e538d60dafc8b4b60009418b 323 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 3 319 31.024 T 23-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 BUMPUSDA_RS02340 c8763210e538d60dafc8b4b60009418b 323 SUPERFAMILY SSF56042 143 309 2.09E-37 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain BUMPUSDA_RS02340 c8763210e538d60dafc8b4b60009418b 323 PANTHER PTHR30270 1 323 1.1E-119 T 23-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 BUMPUSDA_RS02340 c8763210e538d60dafc8b4b60009418b 323 PANTHER PTHR30270:SF0 1 323 1.1E-119 T 23-04-2016 BUMPUSDA_RS02340 c8763210e538d60dafc8b4b60009418b 323 SUPERFAMILY SSF55326 4 138 5.41E-32 T 23-04-2016 BUMPUSDA_RS02340 c8763210e538d60dafc8b4b60009418b 323 Pfam PF02769 AIR synthase related protein, C-terminal domain 151 298 4.0E-10 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain BUMPUSDA_RS02340 c8763210e538d60dafc8b4b60009418b 323 Gene3D G3DSA:3.30.1330.10 2 140 2.1E-41 T 23-04-2016 IPR016188 PurM-like, N-terminal domain BUMPUSDA_RS02340 c8763210e538d60dafc8b4b60009418b 323 PIRSF PIRSF005303 1 322 8.8E-92 T 23-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 BUMPUSDA_RS02340 c8763210e538d60dafc8b4b60009418b 323 Pfam PF00586 AIR synthase related protein, N-terminal domain 29 137 1.2E-20 T 23-04-2016 IPR016188 PurM-like, N-terminal domain BUMPUSDA_RS02340 c8763210e538d60dafc8b4b60009418b 323 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 4 322 9.3E-115 T 23-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 BUMPUSDA_RS02340 c8763210e538d60dafc8b4b60009418b 323 Gene3D G3DSA:3.90.650.10 145 322 9.4E-46 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain BUMPUSDA_RS02385 1180adfb3e09f1fb66b08efb4c59d38f 108 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 18 91 1.6E-14 T 23-04-2016 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 BUMPUSDA_RS02385 1180adfb3e09f1fb66b08efb4c59d38f 108 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 11 106 1.2E-33 T 23-04-2016 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 BUMPUSDA_RS02385 1180adfb3e09f1fb66b08efb4c59d38f 108 PANTHER PTHR36835 1 108 2.7E-21 T 23-04-2016 BUMPUSDA_RS01470 3df56d57fd1622318cb7fd9ceaae8727 342 SMART SM00876 218 310 1.3E-43 T 23-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 BUMPUSDA_RS01470 3df56d57fd1622318cb7fd9ceaae8727 342 PANTHER PTHR22976:SF1 3 342 9.2E-165 T 23-04-2016 BUMPUSDA_RS01470 3df56d57fd1622318cb7fd9ceaae8727 342 Pfam PF04055 Radical SAM superfamily 48 204 2.1E-13 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 BUMPUSDA_RS01470 3df56d57fd1622318cb7fd9ceaae8727 342 PANTHER PTHR22976 3 342 9.2E-165 T 23-04-2016 BUMPUSDA_RS01470 3df56d57fd1622318cb7fd9ceaae8727 342 Hamap MF_01694 Biotin synthase [bioB]. 3 311 40.737 T 23-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 BUMPUSDA_RS01470 3df56d57fd1622318cb7fd9ceaae8727 342 Gene3D G3DSA:3.20.20.70 3 311 9.0E-99 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 BUMPUSDA_RS01470 3df56d57fd1622318cb7fd9ceaae8727 342 SMART SM00729 41 253 2.9E-38 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 BUMPUSDA_RS01470 3df56d57fd1622318cb7fd9ceaae8727 342 TIGRFAM TIGR00433 bioB: biotin synthase 12 308 6.5E-122 T 23-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 BUMPUSDA_RS01470 3df56d57fd1622318cb7fd9ceaae8727 342 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 218 308 4.3E-19 T 23-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 BUMPUSDA_RS01470 3df56d57fd1622318cb7fd9ceaae8727 342 SUPERFAMILY SSF102114 3 311 7.46E-84 T 23-04-2016 BUMPUSDA_RS01470 3df56d57fd1622318cb7fd9ceaae8727 342 PIRSF PIRSF001619 1 317 5.0E-133 T 23-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 BUMPUSDA_RS02365 135d5a61a2d7b0076166366bc413f109 295 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 215 227 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 BUMPUSDA_RS02365 135d5a61a2d7b0076166366bc413f109 295 PANTHER PTHR12001 1 266 3.8E-76 T 23-04-2016 IPR017446 Polyprenyl synthetase-related BUMPUSDA_RS02365 135d5a61a2d7b0076166366bc413f109 295 PANTHER PTHR12001:SF23 1 266 3.8E-76 T 23-04-2016 BUMPUSDA_RS02365 135d5a61a2d7b0076166366bc413f109 295 Pfam PF00348 Polyprenyl synthetase 31 268 2.0E-45 T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 BUMPUSDA_RS02365 135d5a61a2d7b0076166366bc413f109 295 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 97 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 BUMPUSDA_RS02365 135d5a61a2d7b0076166366bc413f109 295 Gene3D G3DSA:1.10.600.10 2 270 1.1E-67 T 23-04-2016 IPR008949 Isoprenoid synthase domain BUMPUSDA_RS02365 135d5a61a2d7b0076166366bc413f109 295 SUPERFAMILY SSF48576 1 285 1.2E-68 T 23-04-2016 IPR008949 Isoprenoid synthase domain BUMPUSDA_RS01255 8e30b47070f1c255a4c4d69dfe1fe13d 238 SMART SM00479 5 182 1.4E-48 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III BUMPUSDA_RS01255 8e30b47070f1c255a4c4d69dfe1fe13d 238 PANTHER PTHR30231 1 238 1.8E-87 T 23-04-2016 BUMPUSDA_RS01255 8e30b47070f1c255a4c4d69dfe1fe13d 238 Pfam PF00929 Exonuclease 7 173 2.0E-37 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III BUMPUSDA_RS01255 8e30b47070f1c255a4c4d69dfe1fe13d 238 Gene3D G3DSA:3.30.420.10 2 181 1.9E-59 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 BUMPUSDA_RS01255 8e30b47070f1c255a4c4d69dfe1fe13d 238 PANTHER PTHR30231:SF0 1 238 1.8E-87 T 23-04-2016 BUMPUSDA_RS01255 8e30b47070f1c255a4c4d69dfe1fe13d 238 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 5 238 2.6E-96 T 23-04-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BUMPUSDA_RS01255 8e30b47070f1c255a4c4d69dfe1fe13d 238 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 5 222 4.8E-77 T 23-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BUMPUSDA_RS01255 8e30b47070f1c255a4c4d69dfe1fe13d 238 SUPERFAMILY SSF53098 4 182 1.25E-50 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 BUMPUSDA_RS02035 704ddcead625cd291a6c85804130d98f 251 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 8 251 35.307 T 23-04-2016 IPR017689 Outer membrane protein assembly factor BamD BUMPUSDA_RS02035 704ddcead625cd291a6c85804130d98f 251 Gene3D G3DSA:3.40.190.10 24 101 7.0E-5 T 23-04-2016 BUMPUSDA_RS02035 704ddcead625cd291a6c85804130d98f 251 PANTHER PTHR37423 43 249 5.4E-45 T 23-04-2016 BUMPUSDA_RS02035 704ddcead625cd291a6c85804130d98f 251 Pfam PF13525 Outer membrane lipoprotein 42 242 1.0E-47 T 23-04-2016 BUMPUSDA_RS02035 704ddcead625cd291a6c85804130d98f 251 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 16 249 5.5E-51 T 23-04-2016 IPR017689 Outer membrane protein assembly factor BamD BUMPUSDA_RS02760 bfdde45771c709cd5293c9f1107c1efc 407 PANTHER PTHR21110 2 407 4.2E-133 T 23-04-2016 BUMPUSDA_RS02760 bfdde45771c709cd5293c9f1107c1efc 407 SUPERFAMILY SSF53649 1 114 7.02E-61 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 BUMPUSDA_RS02760 bfdde45771c709cd5293c9f1107c1efc 407 SUPERFAMILY SSF53649 236 407 7.02E-61 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 BUMPUSDA_RS02760 bfdde45771c709cd5293c9f1107c1efc 407 Gene3D G3DSA:3.30.70.1250 114 235 1.2E-46 T 23-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 BUMPUSDA_RS02760 bfdde45771c709cd5293c9f1107c1efc 407 SUPERFAMILY SSF143856 117 235 5.89E-43 T 23-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 BUMPUSDA_RS02760 bfdde45771c709cd5293c9f1107c1efc 407 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 404 1.5E-151 T 23-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 BUMPUSDA_RS02760 bfdde45771c709cd5293c9f1107c1efc 407 PIRSF PIRSF001491 1 407 7.9E-154 T 23-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 BUMPUSDA_RS02760 bfdde45771c709cd5293c9f1107c1efc 407 Hamap MF_00740 Phosphopentomutase [deoB]. 1 407 51.963 T 23-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 BUMPUSDA_RS02760 bfdde45771c709cd5293c9f1107c1efc 407 PANTHER PTHR21110:SF0 2 407 4.2E-133 T 23-04-2016 BUMPUSDA_RS02760 bfdde45771c709cd5293c9f1107c1efc 407 Pfam PF01676 Metalloenzyme superfamily 2 398 5.3E-43 T 23-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 BUMPUSDA_RS02760 bfdde45771c709cd5293c9f1107c1efc 407 Gene3D G3DSA:3.40.720.10 240 406 4.0E-62 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 BUMPUSDA_RS02760 bfdde45771c709cd5293c9f1107c1efc 407 Gene3D G3DSA:3.40.720.10 1 113 4.0E-62 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 BUMPUSDA_RS02765 4c3c0fb7f6264ca9c2fbc383fe86ddab 531 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site BUMPUSDA_RS02765 4c3c0fb7f6264ca9c2fbc383fe86ddab 531 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 162 5.0E-19 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 BUMPUSDA_RS02765 4c3c0fb7f6264ca9c2fbc383fe86ddab 531 Pfam PF16658 Class II release factor RF3, C-terminal domain 389 516 4.3E-41 T 23-04-2016 IPR032090 Peptide chain release factor 3, C-terminal BUMPUSDA_RS02765 4c3c0fb7f6264ca9c2fbc383fe86ddab 531 SUPERFAMILY SSF54980 395 470 5.4E-16 T 23-04-2016 IPR009022 Elongation factor G, III-V domain BUMPUSDA_RS02765 4c3c0fb7f6264ca9c2fbc383fe86ddab 531 PANTHER PTHR23115 1 184 1.9E-225 T 23-04-2016 BUMPUSDA_RS02765 4c3c0fb7f6264ca9c2fbc383fe86ddab 531 PANTHER PTHR23115 253 470 1.9E-225 T 23-04-2016 BUMPUSDA_RS02765 4c3c0fb7f6264ca9c2fbc383fe86ddab 531 SUPERFAMILY SSF50447 264 395 3.79E-28 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain BUMPUSDA_RS02765 4c3c0fb7f6264ca9c2fbc383fe86ddab 531 Pfam PF00009 Elongation factor Tu GTP binding domain 13 279 6.3E-47 T 23-04-2016 BUMPUSDA_RS02765 4c3c0fb7f6264ca9c2fbc383fe86ddab 531 Gene3D G3DSA:3.40.50.300 8 284 1.5E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02765 4c3c0fb7f6264ca9c2fbc383fe86ddab 531 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 6 530 1.3E-236 T 23-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 BUMPUSDA_RS02765 4c3c0fb7f6264ca9c2fbc383fe86ddab 531 SUPERFAMILY SSF52540 10 279 1.5E-78 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02765 4c3c0fb7f6264ca9c2fbc383fe86ddab 531 Gene3D G3DSA:2.40.30.10 294 396 1.6E-23 T 23-04-2016 BUMPUSDA_RS02765 4c3c0fb7f6264ca9c2fbc383fe86ddab 531 PRINTS PR00315 GTP-binding elongation factor signature 137 146 3.6E-10 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BUMPUSDA_RS02765 4c3c0fb7f6264ca9c2fbc383fe86ddab 531 PRINTS PR00315 GTP-binding elongation factor signature 15 28 3.6E-10 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BUMPUSDA_RS02765 4c3c0fb7f6264ca9c2fbc383fe86ddab 531 PRINTS PR00315 GTP-binding elongation factor signature 85 95 3.6E-10 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BUMPUSDA_RS02765 4c3c0fb7f6264ca9c2fbc383fe86ddab 531 PRINTS PR00315 GTP-binding elongation factor signature 65 73 3.6E-10 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BUMPUSDA_RS02765 4c3c0fb7f6264ca9c2fbc383fe86ddab 531 PANTHER PTHR23115:SF69 1 184 1.9E-225 T 23-04-2016 BUMPUSDA_RS02765 4c3c0fb7f6264ca9c2fbc383fe86ddab 531 PANTHER PTHR23115:SF69 253 470 1.9E-225 T 23-04-2016 BUMPUSDA_RS02765 4c3c0fb7f6264ca9c2fbc383fe86ddab 531 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 529 49.204 T 23-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 BUMPUSDA_RS02765 4c3c0fb7f6264ca9c2fbc383fe86ddab 531 Pfam PF03144 Elongation factor Tu domain 2 316 382 1.9E-8 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 BUMPUSDA_RS02765 4c3c0fb7f6264ca9c2fbc383fe86ddab 531 Gene3D G3DSA:3.30.70.870 397 466 3.0E-13 T 23-04-2016 BUMPUSDA_RS01510 e48dd55b78d907652d3fdc175ec6795e 262 TIGRFAM TIGR03138 QueF: queuine synthase 9 262 1.1E-107 T 23-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 BUMPUSDA_RS01510 e48dd55b78d907652d3fdc175ec6795e 262 Gene3D G3DSA:3.30.1130.10 9 118 1.2E-33 T 23-04-2016 BUMPUSDA_RS01510 e48dd55b78d907652d3fdc175ec6795e 262 Pfam PF14489 QueF-like protein 176 249 1.2E-26 T 23-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 BUMPUSDA_RS01510 e48dd55b78d907652d3fdc175ec6795e 262 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 262 117.69 T 23-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 BUMPUSDA_RS01510 e48dd55b78d907652d3fdc175ec6795e 262 Gene3D G3DSA:3.30.1130.10 126 254 3.8E-51 T 23-04-2016 BUMPUSDA_RS01510 e48dd55b78d907652d3fdc175ec6795e 262 PIRSF PIRSF004750 3 262 4.9E-110 T 23-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 BUMPUSDA_RS01510 e48dd55b78d907652d3fdc175ec6795e 262 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 9 112 1.2E-38 T 23-04-2016 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 BUMPUSDA_RS01510 e48dd55b78d907652d3fdc175ec6795e 262 PANTHER PTHR34354:SF1 9 262 2.5E-78 T 23-04-2016 BUMPUSDA_RS01510 e48dd55b78d907652d3fdc175ec6795e 262 PANTHER PTHR34354 9 262 2.5E-78 T 23-04-2016 BUMPUSDA_RS01510 e48dd55b78d907652d3fdc175ec6795e 262 SUPERFAMILY SSF55620 166 249 7.34E-10 T 23-04-2016 BUMPUSDA_RS00040 c7948cfef48455c62f29bd7fc7bf6a0b 465 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 465 55.283 T 23-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BUMPUSDA_RS00040 c7948cfef48455c62f29bd7fc7bf6a0b 465 SUPERFAMILY SSF50615 1 73 4.45E-24 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BUMPUSDA_RS00040 c7948cfef48455c62f29bd7fc7bf6a0b 465 SUPERFAMILY SSF52540 77 353 8.13E-89 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS00040 c7948cfef48455c62f29bd7fc7bf6a0b 465 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 135 347 1.5E-63 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BUMPUSDA_RS00040 c7948cfef48455c62f29bd7fc7bf6a0b 465 Gene3D G3DSA:3.40.50.300 76 348 3.5E-106 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS00040 c7948cfef48455c62f29bd7fc7bf6a0b 465 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 72 4.8E-20 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BUMPUSDA_RS00040 c7948cfef48455c62f29bd7fc7bf6a0b 465 SUPERFAMILY SSF47917 350 464 1.88E-52 T 23-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BUMPUSDA_RS00040 c7948cfef48455c62f29bd7fc7bf6a0b 465 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 465 3.3E-251 T 23-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BUMPUSDA_RS00040 c7948cfef48455c62f29bd7fc7bf6a0b 465 Gene3D G3DSA:2.40.10.170 1 73 1.3E-29 T 23-04-2016 BUMPUSDA_RS00040 c7948cfef48455c62f29bd7fc7bf6a0b 465 PANTHER PTHR15184 1 465 0.0 T 23-04-2016 BUMPUSDA_RS00040 c7948cfef48455c62f29bd7fc7bf6a0b 465 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 338 347 - T 23-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BUMPUSDA_RS00040 c7948cfef48455c62f29bd7fc7bf6a0b 465 PANTHER PTHR15184:SF44 1 465 0.0 T 23-04-2016 BUMPUSDA_RS00040 c7948cfef48455c62f29bd7fc7bf6a0b 465 SMART SM00382 147 410 1.6E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain BUMPUSDA_RS00040 c7948cfef48455c62f29bd7fc7bf6a0b 465 Gene3D G3DSA:1.10.1140.10 350 464 8.1E-54 T 23-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BUMPUSDA_RS01370 42384b4f5b9dea893e2a906241b03928 236 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 63 76 - T 23-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 BUMPUSDA_RS01370 42384b4f5b9dea893e2a906241b03928 236 PANTHER PTHR32119 11 236 2.4E-85 T 23-04-2016 BUMPUSDA_RS01370 42384b4f5b9dea893e2a906241b03928 236 Gene3D G3DSA:3.20.20.70 11 235 9.4E-72 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 BUMPUSDA_RS01370 42384b4f5b9dea893e2a906241b03928 236 SMART SM00934 11 231 2.2E-73 T 23-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 BUMPUSDA_RS01370 42384b4f5b9dea893e2a906241b03928 236 PANTHER PTHR32119:SF2 11 236 2.4E-85 T 23-04-2016 BUMPUSDA_RS01370 42384b4f5b9dea893e2a906241b03928 236 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 9 236 36.106 T 23-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 BUMPUSDA_RS01370 42384b4f5b9dea893e2a906241b03928 236 SUPERFAMILY SSF51366 9 235 7.54E-65 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 BUMPUSDA_RS01370 42384b4f5b9dea893e2a906241b03928 236 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 11 229 1.6E-45 T 23-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 BUMPUSDA_RS01370 42384b4f5b9dea893e2a906241b03928 236 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 13 230 6.3E-52 T 23-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 BUMPUSDA_RS00495 5a05b358ed3d23fa918109be6ca6e3dd 299 SUPERFAMILY SSF54913 226 298 2.22E-19 T 23-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta BUMPUSDA_RS00495 5a05b358ed3d23fa918109be6ca6e3dd 299 PANTHER PTHR21403:SF0 3 299 5.0E-118 T 23-04-2016 BUMPUSDA_RS00495 5a05b358ed3d23fa918109be6ca6e3dd 299 Gene3D G3DSA:3.40.190.10 3 139 2.4E-48 T 23-04-2016 BUMPUSDA_RS00495 5a05b358ed3d23fa918109be6ca6e3dd 299 SUPERFAMILY SSF53850 6 224 3.69E-67 T 23-04-2016 BUMPUSDA_RS00495 5a05b358ed3d23fa918109be6ca6e3dd 299 Pfam PF08029 HisG, C-terminal domain 223 296 5.6E-22 T 23-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 BUMPUSDA_RS00495 5a05b358ed3d23fa918109be6ca6e3dd 299 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 6 299 34.307 T 23-04-2016 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 BUMPUSDA_RS00495 5a05b358ed3d23fa918109be6ca6e3dd 299 Pfam PF01634 ATP phosphoribosyltransferase 54 219 8.2E-47 T 23-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 BUMPUSDA_RS00495 5a05b358ed3d23fa918109be6ca6e3dd 299 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 202 298 1.2E-29 T 23-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 BUMPUSDA_RS00495 5a05b358ed3d23fa918109be6ca6e3dd 299 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 156 177 - T 23-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 BUMPUSDA_RS00495 5a05b358ed3d23fa918109be6ca6e3dd 299 PANTHER PTHR21403 3 299 5.0E-118 T 23-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 BUMPUSDA_RS00495 5a05b358ed3d23fa918109be6ca6e3dd 299 Gene3D G3DSA:3.30.70.120 226 299 9.3E-28 T 23-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BUMPUSDA_RS00495 5a05b358ed3d23fa918109be6ca6e3dd 299 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 196 3.2E-55 T 23-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 BUMPUSDA_RS00035 9cc01af72e641e3f3ebdf5159b2c3040 290 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.4E-35 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 BUMPUSDA_RS00035 9cc01af72e641e3f3ebdf5159b2c3040 290 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.4E-35 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 BUMPUSDA_RS00035 9cc01af72e641e3f3ebdf5159b2c3040 290 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 1.4E-35 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 BUMPUSDA_RS00035 9cc01af72e641e3f3ebdf5159b2c3040 290 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 1.4E-35 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 BUMPUSDA_RS00035 9cc01af72e641e3f3ebdf5159b2c3040 290 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 32.794 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 BUMPUSDA_RS00035 9cc01af72e641e3f3ebdf5159b2c3040 290 Gene3D G3DSA:1.10.287.80 236 282 2.6E-27 T 23-04-2016 BUMPUSDA_RS00035 9cc01af72e641e3f3ebdf5159b2c3040 290 Gene3D G3DSA:1.10.287.80 202 235 1.1E-35 T 23-04-2016 BUMPUSDA_RS00035 9cc01af72e641e3f3ebdf5159b2c3040 290 Gene3D G3DSA:1.10.287.80 19 60 1.1E-35 T 23-04-2016 BUMPUSDA_RS00035 9cc01af72e641e3f3ebdf5159b2c3040 290 PANTHER PTHR11693 3 289 3.4E-96 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 BUMPUSDA_RS00035 9cc01af72e641e3f3ebdf5159b2c3040 290 Gene3D G3DSA:3.40.1380.10 64 192 1.8E-31 T 23-04-2016 BUMPUSDA_RS00035 9cc01af72e641e3f3ebdf5159b2c3040 290 Pfam PF00231 ATP synthase 4 286 9.7E-78 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 BUMPUSDA_RS00035 9cc01af72e641e3f3ebdf5159b2c3040 290 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 273 286 - T 23-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site BUMPUSDA_RS00035 9cc01af72e641e3f3ebdf5159b2c3040 290 SUPERFAMILY SSF52943 3 287 1.83E-82 T 23-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain BUMPUSDA_RS00035 9cc01af72e641e3f3ebdf5159b2c3040 290 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 2 287 6.9E-91 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 BUMPUSDA_RS00020 52985c379217bdd83339fe66982df283 161 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 4.6E-20 T 23-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 BUMPUSDA_RS00020 52985c379217bdd83339fe66982df283 161 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 11.584 T 23-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 BUMPUSDA_RS00020 52985c379217bdd83339fe66982df283 161 PANTHER PTHR33445 1 161 1.1E-30 T 23-04-2016 BUMPUSDA_RS00020 52985c379217bdd83339fe66982df283 161 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 8.0E-47 T 23-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 BUMPUSDA_RS00020 52985c379217bdd83339fe66982df283 161 Gene3D G3DSA:1.20.5.620 64 121 3.6E-12 T 23-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain BUMPUSDA_RS00020 52985c379217bdd83339fe66982df283 161 SUPERFAMILY SSF81573 64 121 7.45E-11 T 23-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain BUMPUSDA_RS02450 27eba296b83b455541cb6bd2ba89d33b 361 PANTHER PTHR11669 1 356 5.5E-140 T 23-04-2016 BUMPUSDA_RS02450 27eba296b83b455541cb6bd2ba89d33b 361 PANTHER PTHR11669:SF0 1 356 5.5E-140 T 23-04-2016 BUMPUSDA_RS02450 27eba296b83b455541cb6bd2ba89d33b 361 Gene3D G3DSA:1.20.272.10 243 358 3.9E-30 T 23-04-2016 BUMPUSDA_RS02450 27eba296b83b455541cb6bd2ba89d33b 361 SUPERFAMILY SSF52540 34 223 1.49E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02450 27eba296b83b455541cb6bd2ba89d33b 361 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 235 358 3.9E-24 T 23-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 BUMPUSDA_RS02450 27eba296b83b455541cb6bd2ba89d33b 361 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 357 2.5E-133 T 23-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 BUMPUSDA_RS02450 27eba296b83b455541cb6bd2ba89d33b 361 SUPERFAMILY SSF48019 247 358 7.91E-26 T 23-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 BUMPUSDA_RS02450 27eba296b83b455541cb6bd2ba89d33b 361 Pfam PF13177 DNA polymerase III, delta subunit 20 178 2.3E-41 T 23-04-2016 BUMPUSDA_RS02450 27eba296b83b455541cb6bd2ba89d33b 361 Gene3D G3DSA:3.40.50.300 2 165 8.7E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02450 27eba296b83b455541cb6bd2ba89d33b 361 Gene3D G3DSA:1.10.8.60 166 242 1.0E-23 T 23-04-2016 BUMPUSDA_RS02450 27eba296b83b455541cb6bd2ba89d33b 361 SMART SM00382 37 181 1.2E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain BUMPUSDA_RS02470 df73e03e6f481da273d9363d9b9d000b 217 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 BUMPUSDA_RS02470 df73e03e6f481da273d9363d9b9d000b 217 Gene3D G3DSA:3.40.50.300 1 216 2.7E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02470 df73e03e6f481da273d9363d9b9d000b 217 Hamap MF_00235 Adenylate kinase [adk]. 1 214 44.835 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 BUMPUSDA_RS02470 df73e03e6f481da273d9363d9b9d000b 217 Pfam PF00406 Adenylate kinase 5 186 9.3E-50 T 23-04-2016 BUMPUSDA_RS02470 df73e03e6f481da273d9363d9b9d000b 217 PANTHER PTHR23359 1 191 9.5E-80 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 BUMPUSDA_RS02470 df73e03e6f481da273d9363d9b9d000b 217 PRINTS PR00094 Adenylate kinase signature 156 171 1.1E-26 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 BUMPUSDA_RS02470 df73e03e6f481da273d9363d9b9d000b 217 PRINTS PR00094 Adenylate kinase signature 81 97 1.1E-26 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 BUMPUSDA_RS02470 df73e03e6f481da273d9363d9b9d000b 217 PRINTS PR00094 Adenylate kinase signature 173 187 1.1E-26 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 BUMPUSDA_RS02470 df73e03e6f481da273d9363d9b9d000b 217 PRINTS PR00094 Adenylate kinase signature 32 46 1.1E-26 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 BUMPUSDA_RS02470 df73e03e6f481da273d9363d9b9d000b 217 PRINTS PR00094 Adenylate kinase signature 4 17 1.1E-26 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 BUMPUSDA_RS02470 df73e03e6f481da273d9363d9b9d000b 217 TIGRFAM TIGR01351 adk: adenylate kinase 2 192 2.5E-69 T 23-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 BUMPUSDA_RS02470 df73e03e6f481da273d9363d9b9d000b 217 Pfam PF05191 Adenylate kinase, active site lid 123 158 1.7E-12 T 23-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 BUMPUSDA_RS02470 df73e03e6f481da273d9363d9b9d000b 217 SUPERFAMILY SSF52540 1 214 2.0E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01115 f0fb2a52ea0be5f87772b1f4409b90c7 498 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 4 494 31.617 T 23-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 BUMPUSDA_RS01115 f0fb2a52ea0be5f87772b1f4409b90c7 498 SUPERFAMILY SSF53244 341 496 3.85E-41 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 BUMPUSDA_RS01115 f0fb2a52ea0be5f87772b1f4409b90c7 498 Pfam PF01225 Mur ligase family, catalytic domain 25 102 4.8E-11 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 BUMPUSDA_RS01115 f0fb2a52ea0be5f87772b1f4409b90c7 498 SUPERFAMILY SSF53623 105 334 1.28E-70 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 BUMPUSDA_RS01115 f0fb2a52ea0be5f87772b1f4409b90c7 498 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 21 494 2.1E-150 T 23-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 BUMPUSDA_RS01115 f0fb2a52ea0be5f87772b1f4409b90c7 498 PANTHER PTHR23135 10 497 8.0E-166 T 23-04-2016 BUMPUSDA_RS01115 f0fb2a52ea0be5f87772b1f4409b90c7 498 Pfam PF02875 Mur ligase family, glutamate ligase domain 342 427 6.5E-23 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 BUMPUSDA_RS01115 f0fb2a52ea0be5f87772b1f4409b90c7 498 Gene3D G3DSA:3.90.190.20 345 487 2.2E-45 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 BUMPUSDA_RS01115 f0fb2a52ea0be5f87772b1f4409b90c7 498 SUPERFAMILY SSF63418 6 103 6.15E-20 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 BUMPUSDA_RS01115 f0fb2a52ea0be5f87772b1f4409b90c7 498 Pfam PF08245 Mur ligase middle domain 114 320 1.8E-47 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 BUMPUSDA_RS01115 f0fb2a52ea0be5f87772b1f4409b90c7 498 PANTHER PTHR23135:SF4 10 497 8.0E-166 T 23-04-2016 BUMPUSDA_RS01115 f0fb2a52ea0be5f87772b1f4409b90c7 498 Gene3D G3DSA:3.40.1390.10 5 103 1.1E-22 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 BUMPUSDA_RS01115 f0fb2a52ea0be5f87772b1f4409b90c7 498 Gene3D G3DSA:3.40.1190.10 105 344 1.0E-65 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 BUMPUSDA_RS02280 8035e10fa39edceccb2ea7364c9b8310 370 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 368 32.84 T 23-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 BUMPUSDA_RS02280 8035e10fa39edceccb2ea7364c9b8310 370 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 145 354 4.2E-49 T 23-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 BUMPUSDA_RS02280 8035e10fa39edceccb2ea7364c9b8310 370 Gene3D G3DSA:3.40.50.720 1 143 8.1E-55 T 23-04-2016 IPR016040 NAD(P)-binding domain BUMPUSDA_RS02280 8035e10fa39edceccb2ea7364c9b8310 370 Gene3D G3DSA:3.30.360.10 144 351 1.3E-69 T 23-04-2016 BUMPUSDA_RS02280 8035e10fa39edceccb2ea7364c9b8310 370 PIRSF PIRSF000148 1 370 5.8E-68 T 23-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 BUMPUSDA_RS02280 8035e10fa39edceccb2ea7364c9b8310 370 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 122 1.8E-20 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BUMPUSDA_RS02280 8035e10fa39edceccb2ea7364c9b8310 370 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 262 276 - T 23-04-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 BUMPUSDA_RS02280 8035e10fa39edceccb2ea7364c9b8310 370 PANTHER PTHR10174 46 180 1.6E-129 T 23-04-2016 BUMPUSDA_RS02280 8035e10fa39edceccb2ea7364c9b8310 370 PANTHER PTHR10174 202 368 1.6E-129 T 23-04-2016 BUMPUSDA_RS02280 8035e10fa39edceccb2ea7364c9b8310 370 SUPERFAMILY SSF55347 135 355 3.01E-72 T 23-04-2016 BUMPUSDA_RS02280 8035e10fa39edceccb2ea7364c9b8310 370 SMART SM00859 3 123 8.7E-21 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BUMPUSDA_RS02280 8035e10fa39edceccb2ea7364c9b8310 370 PANTHER PTHR10174:SF116 46 180 1.6E-129 T 23-04-2016 BUMPUSDA_RS02280 8035e10fa39edceccb2ea7364c9b8310 370 PANTHER PTHR10174:SF116 202 368 1.6E-129 T 23-04-2016 BUMPUSDA_RS02280 8035e10fa39edceccb2ea7364c9b8310 370 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 368 8.6E-200 T 23-04-2016 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 BUMPUSDA_RS02280 8035e10fa39edceccb2ea7364c9b8310 370 SUPERFAMILY SSF51735 1 148 1.02E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain BUMPUSDA_RS00425 4a288ec2177aa886edca9278181ad0e2 257 Pfam PF01311 Bacterial export proteins, family 1 14 244 1.4E-52 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BUMPUSDA_RS00425 4a288ec2177aa886edca9278181ad0e2 257 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 13 253 8.6E-65 T 23-04-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 BUMPUSDA_RS00425 4a288ec2177aa886edca9278181ad0e2 257 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 4.0E-21 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BUMPUSDA_RS00425 4a288ec2177aa886edca9278181ad0e2 257 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 4.0E-21 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BUMPUSDA_RS00425 4a288ec2177aa886edca9278181ad0e2 257 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 201 220 4.0E-21 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BUMPUSDA_RS00425 4a288ec2177aa886edca9278181ad0e2 257 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 179 201 4.0E-21 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BUMPUSDA_RS00425 4a288ec2177aa886edca9278181ad0e2 257 PANTHER PTHR30065 1 255 4.1E-57 T 23-04-2016 BUMPUSDA_RS00425 4a288ec2177aa886edca9278181ad0e2 257 PANTHER PTHR30065:SF1 1 255 4.1E-57 T 23-04-2016 BUMPUSDA_RS02900 3bbb07de19bcfa641cc3e0aae0917256 303 Pfam PF01715 IPP transferase 31 274 3.8E-67 T 23-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 BUMPUSDA_RS02900 3bbb07de19bcfa641cc3e0aae0917256 303 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 1 300 23.952 T 23-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 BUMPUSDA_RS02900 3bbb07de19bcfa641cc3e0aae0917256 303 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 1 278 5.6E-95 T 23-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 BUMPUSDA_RS02900 3bbb07de19bcfa641cc3e0aae0917256 303 PANTHER PTHR11088 1 276 1.2E-81 T 23-04-2016 BUMPUSDA_RS02900 3bbb07de19bcfa641cc3e0aae0917256 303 SUPERFAMILY SSF52540 1 133 3.22E-11 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02900 3bbb07de19bcfa641cc3e0aae0917256 303 Gene3D G3DSA:3.40.50.300 1 161 2.0E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02900 3bbb07de19bcfa641cc3e0aae0917256 303 Gene3D G3DSA:1.10.287.890 190 272 1.2E-28 T 23-04-2016 BUMPUSDA_RS00045 e5442255542f866298643b28aaf71b55 139 SUPERFAMILY SSF51344 3 86 6.02E-22 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 BUMPUSDA_RS00045 e5442255542f866298643b28aaf71b55 139 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 83 7.3E-25 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 BUMPUSDA_RS00045 e5442255542f866298643b28aaf71b55 139 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 133 8.3E-40 T 23-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 BUMPUSDA_RS00045 e5442255542f866298643b28aaf71b55 139 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 85 3.0E-29 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 BUMPUSDA_RS00045 e5442255542f866298643b28aaf71b55 139 Gene3D G3DSA:1.20.5.440 95 133 7.6E-5 T 23-04-2016 BUMPUSDA_RS00045 e5442255542f866298643b28aaf71b55 139 PANTHER PTHR13822 1 137 2.8E-31 T 23-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 BUMPUSDA_RS00045 e5442255542f866298643b28aaf71b55 139 SUPERFAMILY SSF46604 89 136 2.43E-8 T 23-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain BUMPUSDA_RS00045 e5442255542f866298643b28aaf71b55 139 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 131 17.638 T 23-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 BUMPUSDA_RS00045 e5442255542f866298643b28aaf71b55 139 Gene3D G3DSA:2.60.15.10 3 91 1.7E-25 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 BUMPUSDA_RS02415 776be9be94e125dfb2142828ad7cda00 208 Pfam PF00574 Clp protease 26 206 1.4E-83 T 23-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA BUMPUSDA_RS02415 776be9be94e125dfb2142828ad7cda00 208 PANTHER PTHR10381:SF22 12 208 6.0E-126 T 23-04-2016 BUMPUSDA_RS02415 776be9be94e125dfb2142828ad7cda00 208 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 17 207 42.244 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BUMPUSDA_RS02415 776be9be94e125dfb2142828ad7cda00 208 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 104 115 - T 23-04-2016 IPR018215 ClpP, Ser active site BUMPUSDA_RS02415 776be9be94e125dfb2142828ad7cda00 208 PRINTS PR00127 Clp protease catalytic subunit P signature 104 121 8.6E-50 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BUMPUSDA_RS02415 776be9be94e125dfb2142828ad7cda00 208 PRINTS PR00127 Clp protease catalytic subunit P signature 73 93 8.6E-50 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BUMPUSDA_RS02415 776be9be94e125dfb2142828ad7cda00 208 PRINTS PR00127 Clp protease catalytic subunit P signature 125 144 8.6E-50 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BUMPUSDA_RS02415 776be9be94e125dfb2142828ad7cda00 208 PRINTS PR00127 Clp protease catalytic subunit P signature 33 48 8.6E-50 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BUMPUSDA_RS02415 776be9be94e125dfb2142828ad7cda00 208 PRINTS PR00127 Clp protease catalytic subunit P signature 182 201 8.6E-50 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BUMPUSDA_RS02415 776be9be94e125dfb2142828ad7cda00 208 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 17 206 2.3E-100 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BUMPUSDA_RS02415 776be9be94e125dfb2142828ad7cda00 208 Gene3D G3DSA:3.90.226.10 17 207 6.9E-85 T 23-04-2016 IPR029045 ClpP/crotonase-like domain BUMPUSDA_RS02415 776be9be94e125dfb2142828ad7cda00 208 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 126 139 - T 23-04-2016 IPR033135 ClpP, histidine active site BUMPUSDA_RS02415 776be9be94e125dfb2142828ad7cda00 208 PANTHER PTHR10381 12 208 6.0E-126 T 23-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA BUMPUSDA_RS02415 776be9be94e125dfb2142828ad7cda00 208 SUPERFAMILY SSF52096 24 207 3.91E-68 T 23-04-2016 IPR029045 ClpP/crotonase-like domain BUMPUSDA_RS02955 bedd6a8c607c397ce3e3f437fe70d8f7 176 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 1.6E-83 T 23-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 BUMPUSDA_RS02955 bedd6a8c607c397ce3e3f437fe70d8f7 176 Pfam PF00227 Proteasome subunit 2 170 8.1E-22 T 23-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 BUMPUSDA_RS02955 bedd6a8c607c397ce3e3f437fe70d8f7 176 Gene3D G3DSA:3.60.20.10 2 172 5.8E-81 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal BUMPUSDA_RS02955 bedd6a8c607c397ce3e3f437fe70d8f7 176 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 39.511 T 23-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 BUMPUSDA_RS02955 bedd6a8c607c397ce3e3f437fe70d8f7 176 PANTHER PTHR32194 2 172 7.8E-114 T 23-04-2016 BUMPUSDA_RS02955 bedd6a8c607c397ce3e3f437fe70d8f7 176 PIRSF PIRSF039093 1 175 2.0E-85 T 23-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 BUMPUSDA_RS02955 bedd6a8c607c397ce3e3f437fe70d8f7 176 SUPERFAMILY SSF56235 2 170 5.9E-57 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal BUMPUSDA_RS02945 9e52e00eb2e67ee035749f7f9fc1a48f 72 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 30.224 T 23-04-2016 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02945 9e52e00eb2e67ee035749f7f9fc1a48f 72 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02945 9e52e00eb2e67ee035749f7f9fc1a48f 72 PANTHER PTHR33280 1 64 9.9E-34 T 23-04-2016 BUMPUSDA_RS02945 9e52e00eb2e67ee035749f7f9fc1a48f 72 Pfam PF01197 Ribosomal protein L31 1 65 1.8E-29 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02945 9e52e00eb2e67ee035749f7f9fc1a48f 72 SUPERFAMILY SSF143800 1 66 3.37E-27 T 23-04-2016 BUMPUSDA_RS02945 9e52e00eb2e67ee035749f7f9fc1a48f 72 PANTHER PTHR33280:SF2 1 64 9.9E-34 T 23-04-2016 BUMPUSDA_RS02945 9e52e00eb2e67ee035749f7f9fc1a48f 72 PRINTS PR01249 Ribosomal protein L31 signature 31 46 1.5E-22 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02945 9e52e00eb2e67ee035749f7f9fc1a48f 72 PRINTS PR01249 Ribosomal protein L31 signature 46 64 1.5E-22 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02945 9e52e00eb2e67ee035749f7f9fc1a48f 72 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.5E-22 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02945 9e52e00eb2e67ee035749f7f9fc1a48f 72 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 8.8E-33 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS01845 ea3bf5bf360dfe1dc80cc10e949cb6c1 700 SMART SM00981 56 155 1.0E-14 T 23-04-2016 IPR004114 THUMP domain GO:0003723 BUMPUSDA_RS01845 ea3bf5bf360dfe1dc80cc10e949cb6c1 700 PANTHER PTHR18895 399 677 7.9E-90 T 23-04-2016 BUMPUSDA_RS01845 ea3bf5bf360dfe1dc80cc10e949cb6c1 700 SUPERFAMILY SSF53335 394 699 4.78E-57 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BUMPUSDA_RS01845 ea3bf5bf360dfe1dc80cc10e949cb6c1 700 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 308 314 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BUMPUSDA_RS01845 ea3bf5bf360dfe1dc80cc10e949cb6c1 700 PANTHER PTHR18895:SF62 399 677 7.9E-90 T 23-04-2016 BUMPUSDA_RS01845 ea3bf5bf360dfe1dc80cc10e949cb6c1 700 Pfam PF02926 THUMP domain 35 143 6.3E-10 T 23-04-2016 IPR004114 THUMP domain GO:0003723 BUMPUSDA_RS01845 ea3bf5bf360dfe1dc80cc10e949cb6c1 700 PIRSF PIRSF037618 1 700 1.8E-261 T 23-04-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 BUMPUSDA_RS01845 ea3bf5bf360dfe1dc80cc10e949cb6c1 700 Pfam PF01170 Putative RNA methylase family UPF0020 163 376 9.0E-47 T 23-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 BUMPUSDA_RS01845 ea3bf5bf360dfe1dc80cc10e949cb6c1 700 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 196 207 - T 23-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 BUMPUSDA_RS01845 ea3bf5bf360dfe1dc80cc10e949cb6c1 700 Gene3D G3DSA:3.40.50.150 430 698 9.4E-58 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BUMPUSDA_RS01845 ea3bf5bf360dfe1dc80cc10e949cb6c1 700 SUPERFAMILY SSF53335 147 218 3.11E-32 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BUMPUSDA_RS01845 ea3bf5bf360dfe1dc80cc10e949cb6c1 700 SUPERFAMILY SSF53335 260 374 3.11E-32 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BUMPUSDA_RS01845 ea3bf5bf360dfe1dc80cc10e949cb6c1 700 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 470 651 1.1E-13 T 23-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 BUMPUSDA_RS01845 ea3bf5bf360dfe1dc80cc10e949cb6c1 700 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 700 28.258 T 23-04-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 BUMPUSDA_RS01845 ea3bf5bf360dfe1dc80cc10e949cb6c1 700 Gene3D G3DSA:3.40.50.150 257 322 1.0E-20 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BUMPUSDA_RS01845 ea3bf5bf360dfe1dc80cc10e949cb6c1 700 Gene3D G3DSA:3.40.50.150 160 212 1.0E-20 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BUMPUSDA_RS00280 89ec2598cb221f572a47f3976b2774a8 613 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 403 416 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BUMPUSDA_RS00280 89ec2598cb221f572a47f3976b2774a8 613 Gene3D G3DSA:1.10.601.10 113 448 1.7E-131 T 23-04-2016 BUMPUSDA_RS00280 89ec2598cb221f572a47f3976b2774a8 613 PANTHER PTHR30603 2 153 2.5E-247 T 23-04-2016 BUMPUSDA_RS00280 89ec2598cb221f572a47f3976b2774a8 613 PANTHER PTHR30603 326 612 2.5E-247 T 23-04-2016 BUMPUSDA_RS00280 89ec2598cb221f572a47f3976b2774a8 613 Pfam PF04546 Sigma-70, non-essential region 140 348 4.6E-66 T 23-04-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BUMPUSDA_RS00280 89ec2598cb221f572a47f3976b2774a8 613 Pfam PF04542 Sigma-70 region 2 379 448 1.7E-21 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BUMPUSDA_RS00280 89ec2598cb221f572a47f3976b2774a8 613 Gene3D G3DSA:1.10.10.10 543 612 1.1E-32 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain BUMPUSDA_RS00280 89ec2598cb221f572a47f3976b2774a8 613 PANTHER PTHR30603:SF0 2 153 2.5E-247 T 23-04-2016 BUMPUSDA_RS00280 89ec2598cb221f572a47f3976b2774a8 613 PANTHER PTHR30603:SF0 326 612 2.5E-247 T 23-04-2016 BUMPUSDA_RS00280 89ec2598cb221f572a47f3976b2774a8 613 Pfam PF00140 Sigma-70 factor, region 1.2 99 129 1.0E-12 T 23-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BUMPUSDA_RS00280 89ec2598cb221f572a47f3976b2774a8 613 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 572 598 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BUMPUSDA_RS00280 89ec2598cb221f572a47f3976b2774a8 613 SUPERFAMILY SSF88659 452 525 6.54E-20 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BUMPUSDA_RS00280 89ec2598cb221f572a47f3976b2774a8 613 SUPERFAMILY SSF88946 116 446 2.51E-97 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BUMPUSDA_RS00280 89ec2598cb221f572a47f3976b2774a8 613 SUPERFAMILY SSF88659 509 611 9.16E-26 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BUMPUSDA_RS00280 89ec2598cb221f572a47f3976b2774a8 613 Pfam PF04539 Sigma-70 region 3 458 533 7.0E-27 T 23-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BUMPUSDA_RS00280 89ec2598cb221f572a47f3976b2774a8 613 Pfam PF04545 Sigma-70, region 4 547 600 1.3E-18 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BUMPUSDA_RS00280 89ec2598cb221f572a47f3976b2774a8 613 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 5 612 45.765 T 23-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 BUMPUSDA_RS00280 89ec2598cb221f572a47f3976b2774a8 613 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 375 611 6.1E-120 T 23-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 BUMPUSDA_RS00280 89ec2598cb221f572a47f3976b2774a8 613 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 375 600 3.9E-38 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BUMPUSDA_RS00280 89ec2598cb221f572a47f3976b2774a8 613 Gene3D G3DSA:1.10.10.10 452 503 1.1E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain BUMPUSDA_RS00280 89ec2598cb221f572a47f3976b2774a8 613 Pfam PF03979 Sigma-70 factor, region 1.1 5 79 1.3E-28 T 23-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 BUMPUSDA_RS00280 89ec2598cb221f572a47f3976b2774a8 613 PRINTS PR00046 Major sigma-70 factor signature 572 587 6.3E-31 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BUMPUSDA_RS00280 89ec2598cb221f572a47f3976b2774a8 613 PRINTS PR00046 Major sigma-70 factor signature 551 563 6.3E-31 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BUMPUSDA_RS00280 89ec2598cb221f572a47f3976b2774a8 613 PRINTS PR00046 Major sigma-70 factor signature 587 598 6.3E-31 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BUMPUSDA_RS00280 89ec2598cb221f572a47f3976b2774a8 613 PRINTS PR00046 Major sigma-70 factor signature 427 435 6.3E-31 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BUMPUSDA_RS00280 89ec2598cb221f572a47f3976b2774a8 613 PRINTS PR00046 Major sigma-70 factor signature 403 416 6.3E-31 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BUMPUSDA_RS02320 c3f7968a33990a4feeb56ede93bb381c 442 Gene3D G3DSA:3.40.1160.10 23 290 1.1E-59 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 BUMPUSDA_RS02320 c3f7968a33990a4feeb56ede93bb381c 442 PANTHER PTHR30602:SF3 1 442 2.9E-285 T 23-04-2016 BUMPUSDA_RS02320 c3f7968a33990a4feeb56ede93bb381c 442 Pfam PF00583 Acetyltransferase (GNAT) family 345 412 1.1E-6 T 23-04-2016 IPR000182 GNAT domain GO:0008080 BUMPUSDA_RS02320 c3f7968a33990a4feeb56ede93bb381c 442 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 441 221.075 T 23-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 BUMPUSDA_RS02320 c3f7968a33990a4feeb56ede93bb381c 442 Pfam PF00696 Amino acid kinase family 25 267 2.9E-21 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 BUMPUSDA_RS02320 c3f7968a33990a4feeb56ede93bb381c 442 SUPERFAMILY SSF55729 296 420 4.51E-16 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase BUMPUSDA_RS02320 c3f7968a33990a4feeb56ede93bb381c 442 PANTHER PTHR30602 1 442 2.9E-285 T 23-04-2016 BUMPUSDA_RS02320 c3f7968a33990a4feeb56ede93bb381c 442 PIRSF PIRSF000423 1 441 4.1E-203 T 23-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 BUMPUSDA_RS02320 c3f7968a33990a4feeb56ede93bb381c 442 Gene3D G3DSA:3.40.630.30 294 438 8.2E-38 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase BUMPUSDA_RS02320 c3f7968a33990a4feeb56ede93bb381c 442 SUPERFAMILY SSF53633 3 289 4.05E-62 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 BUMPUSDA_RS02320 c3f7968a33990a4feeb56ede93bb381c 442 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 8 439 2.6E-187 T 23-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 BUMPUSDA_RS00925 d1262bd122f2a04939f8d31cf610336e 213 PANTHER PTHR11264 7 213 5.7E-109 T 23-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 BUMPUSDA_RS00925 d1262bd122f2a04939f8d31cf610336e 213 SMART SM00986 39 200 6.0E-32 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like BUMPUSDA_RS00925 d1262bd122f2a04939f8d31cf610336e 213 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 5 204 5.8E-80 T 23-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 BUMPUSDA_RS00925 d1262bd122f2a04939f8d31cf610336e 213 SUPERFAMILY SSF52141 7 212 1.5E-84 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like BUMPUSDA_RS00925 d1262bd122f2a04939f8d31cf610336e 213 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 5 211 36.437 T 23-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 BUMPUSDA_RS00925 d1262bd122f2a04939f8d31cf610336e 213 Pfam PF03167 Uracil DNA glycosylase superfamily 44 199 3.6E-25 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like BUMPUSDA_RS00925 d1262bd122f2a04939f8d31cf610336e 213 Gene3D G3DSA:3.40.470.10 4 211 7.4E-89 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like BUMPUSDA_RS00925 d1262bd122f2a04939f8d31cf610336e 213 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 47 56 - T 23-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 BUMPUSDA_RS00925 d1262bd122f2a04939f8d31cf610336e 213 SMART SM00987 39 200 6.0E-32 T 23-04-2016 BUMPUSDA_RS02150 6975f7271ec43dbb360a16d2be586e85 206 Gene3D G3DSA:3.40.50.300 7 200 3.9E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02150 6975f7271ec43dbb360a16d2be586e85 206 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 14 193 9.1E-72 T 23-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 BUMPUSDA_RS02150 6975f7271ec43dbb360a16d2be586e85 206 Pfam PF01583 Adenylylsulphate kinase 28 180 7.0E-66 T 23-04-2016 BUMPUSDA_RS02150 6975f7271ec43dbb360a16d2be586e85 206 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 27 198 33.982 T 23-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 BUMPUSDA_RS02150 6975f7271ec43dbb360a16d2be586e85 206 SUPERFAMILY SSF52540 27 198 8.51E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02150 6975f7271ec43dbb360a16d2be586e85 206 PANTHER PTHR11055 1 200 3.3E-98 T 23-04-2016 BUMPUSDA_RS02635 15ef236e1c5de408787615d0428775c9 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 3.6E-46 T 23-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02635 15ef236e1c5de408787615d0428775c9 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 23-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02635 15ef236e1c5de408787615d0428775c9 136 SUPERFAMILY SSF54686 3 132 1.02E-54 T 23-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02635 15ef236e1c5de408787615d0428775c9 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 2.8E-39 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 BUMPUSDA_RS02635 15ef236e1c5de408787615d0428775c9 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 2.8E-39 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 BUMPUSDA_RS02635 15ef236e1c5de408787615d0428775c9 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 2.8E-39 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 BUMPUSDA_RS02635 15ef236e1c5de408787615d0428775c9 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 2.8E-39 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 BUMPUSDA_RS02635 15ef236e1c5de408787615d0428775c9 136 PANTHER PTHR12220 1 136 3.1E-74 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 BUMPUSDA_RS02635 15ef236e1c5de408787615d0428775c9 136 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 81 92 - T 23-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02635 15ef236e1c5de408787615d0428775c9 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 5.7E-59 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 BUMPUSDA_RS02635 15ef236e1c5de408787615d0428775c9 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.843 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 BUMPUSDA_RS02635 15ef236e1c5de408787615d0428775c9 136 Gene3D G3DSA:3.90.1170.10 22 133 3.4E-52 T 23-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS00935 795f520aa66395bee2abbea2b2452f94 292 SUPERFAMILY SSF111331 8 289 1.57E-87 T 23-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain BUMPUSDA_RS00935 795f520aa66395bee2abbea2b2452f94 292 Hamap MF_00361 NAD kinase [nadK]. 6 287 31.123 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 BUMPUSDA_RS00935 795f520aa66395bee2abbea2b2452f94 292 Pfam PF01513 ATP-NAD kinase 8 271 8.1E-66 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 BUMPUSDA_RS00935 795f520aa66395bee2abbea2b2452f94 292 PANTHER PTHR20275 8 289 2.1E-90 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 BUMPUSDA_RS00935 795f520aa66395bee2abbea2b2452f94 292 Gene3D G3DSA:2.60.200.30 150 261 4.8E-39 T 23-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 BUMPUSDA_RS00935 795f520aa66395bee2abbea2b2452f94 292 Gene3D G3DSA:3.40.50.10330 1 149 3.9E-34 T 23-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 BUMPUSDA_RS02295 dbfb3fd352d388cc43f9abd054a77dab 347 PANTHER PTHR30559 1 347 2.4E-192 T 23-04-2016 BUMPUSDA_RS02295 dbfb3fd352d388cc43f9abd054a77dab 347 PIRSF PIRSF001359 1 347 2.1E-86 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BUMPUSDA_RS02295 dbfb3fd352d388cc43f9abd054a77dab 347 SUPERFAMILY SSF51569 2 345 1.45E-119 T 23-04-2016 BUMPUSDA_RS02295 dbfb3fd352d388cc43f9abd054a77dab 347 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 345 4.2E-106 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BUMPUSDA_RS02295 dbfb3fd352d388cc43f9abd054a77dab 347 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 160 171 - T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BUMPUSDA_RS02295 dbfb3fd352d388cc43f9abd054a77dab 347 Pfam PF01116 Fructose-bisphosphate aldolase class-II 9 343 1.8E-84 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BUMPUSDA_RS02295 dbfb3fd352d388cc43f9abd054a77dab 347 Gene3D G3DSA:3.20.20.70 1 344 1.2E-112 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 BUMPUSDA_RS02295 dbfb3fd352d388cc43f9abd054a77dab 347 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 88 100 - T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BUMPUSDA_RS02295 dbfb3fd352d388cc43f9abd054a77dab 347 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 2 345 1.3E-157 T 23-04-2016 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 BUMPUSDA_RS02295 dbfb3fd352d388cc43f9abd054a77dab 347 PANTHER PTHR30559:SF0 1 347 2.4E-192 T 23-04-2016 BUMPUSDA_RS00055 adb9eba2c1d778f86e943e7be41809ae 366 Gene3D G3DSA:3.10.150.10 255 362 4.1E-26 T 23-04-2016 BUMPUSDA_RS00055 adb9eba2c1d778f86e943e7be41809ae 366 SUPERFAMILY SSF55979 127 244 4.65E-29 T 23-04-2016 BUMPUSDA_RS00055 adb9eba2c1d778f86e943e7be41809ae 366 SMART SM00480 17 362 1.5E-115 T 23-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BUMPUSDA_RS00055 adb9eba2c1d778f86e943e7be41809ae 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 365 2.0E-105 T 23-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BUMPUSDA_RS00055 adb9eba2c1d778f86e943e7be41809ae 366 Gene3D G3DSA:3.10.150.10 1 120 5.7E-23 T 23-04-2016 BUMPUSDA_RS00055 adb9eba2c1d778f86e943e7be41809ae 366 SUPERFAMILY SSF55979 1 121 2.2E-23 T 23-04-2016 BUMPUSDA_RS00055 adb9eba2c1d778f86e943e7be41809ae 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 118 6.5E-24 T 23-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BUMPUSDA_RS00055 adb9eba2c1d778f86e943e7be41809ae 366 SUPERFAMILY SSF55979 255 363 3.72E-26 T 23-04-2016 BUMPUSDA_RS00055 adb9eba2c1d778f86e943e7be41809ae 366 PIRSF PIRSF000804 1 365 9.4E-94 T 23-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BUMPUSDA_RS00055 adb9eba2c1d778f86e943e7be41809ae 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 2.5E-32 T 23-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BUMPUSDA_RS00055 adb9eba2c1d778f86e943e7be41809ae 366 PANTHER PTHR30478 2 365 4.1E-99 T 23-04-2016 BUMPUSDA_RS00055 adb9eba2c1d778f86e943e7be41809ae 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 253 362 5.2E-23 T 23-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BUMPUSDA_RS00055 adb9eba2c1d778f86e943e7be41809ae 366 Gene3D G3DSA:3.10.150.10 127 247 5.6E-33 T 23-04-2016 BUMPUSDA_RS01990 b0bb6b52ce2567154d6d81c9471488bd 452 SMART SM00963 1 86 9.4E-30 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 BUMPUSDA_RS01990 b0bb6b52ce2567154d6d81c9471488bd 452 Gene3D G3DSA:3.40.50.300 94 297 1.9E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01990 b0bb6b52ce2567154d6d81c9471488bd 452 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 440 32.378 T 23-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 BUMPUSDA_RS01990 b0bb6b52ce2567154d6d81c9471488bd 452 Pfam PF02978 Signal peptide binding domain 328 428 4.7E-26 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 BUMPUSDA_RS01990 b0bb6b52ce2567154d6d81c9471488bd 452 SMART SM00962 100 296 8.0E-102 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 BUMPUSDA_RS01990 b0bb6b52ce2567154d6d81c9471488bd 452 Pfam PF00448 SRP54-type protein, GTPase domain 101 296 1.4E-71 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 BUMPUSDA_RS01990 b0bb6b52ce2567154d6d81c9471488bd 452 PANTHER PTHR11564:SF7 1 435 4.2E-216 T 23-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 BUMPUSDA_RS01990 b0bb6b52ce2567154d6d81c9471488bd 452 Gene3D G3DSA:1.20.120.140 2 89 4.7E-30 T 23-04-2016 BUMPUSDA_RS01990 b0bb6b52ce2567154d6d81c9471488bd 452 Gene3D G3DSA:1.10.260.30 328 432 7.6E-31 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 BUMPUSDA_RS01990 b0bb6b52ce2567154d6d81c9471488bd 452 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.2E-20 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 BUMPUSDA_RS01990 b0bb6b52ce2567154d6d81c9471488bd 452 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 BUMPUSDA_RS01990 b0bb6b52ce2567154d6d81c9471488bd 452 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 430 3.8E-162 T 23-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 BUMPUSDA_RS01990 b0bb6b52ce2567154d6d81c9471488bd 452 SUPERFAMILY SSF52540 42 347 5.31E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01990 b0bb6b52ce2567154d6d81c9471488bd 452 SMART SM00382 99 302 3.4E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain BUMPUSDA_RS01990 b0bb6b52ce2567154d6d81c9471488bd 452 PANTHER PTHR11564 1 435 4.2E-216 T 23-04-2016 BUMPUSDA_RS01990 b0bb6b52ce2567154d6d81c9471488bd 452 SUPERFAMILY SSF47446 299 431 2.62E-37 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 BUMPUSDA_RS01610 ce66efff74816395a444c1b81ea20a31 262 PANTHER PTHR30477 2 260 1.9E-69 T 23-04-2016 BUMPUSDA_RS01610 ce66efff74816395a444c1b81ea20a31 262 Pfam PF00950 ABC 3 transport family 1 258 2.0E-66 T 23-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 BUMPUSDA_RS01610 ce66efff74816395a444c1b81ea20a31 262 SUPERFAMILY SSF81345 2 253 7.98E-34 T 23-04-2016 IPR029022 ABC transporter, BtuC-like BUMPUSDA_RS01610 ce66efff74816395a444c1b81ea20a31 262 PANTHER PTHR30477:SF0 2 260 1.9E-69 T 23-04-2016 BUMPUSDA_RS01610 ce66efff74816395a444c1b81ea20a31 262 Gene3D G3DSA:1.10.3470.10 54 234 3.9E-8 T 23-04-2016 IPR029022 ABC transporter, BtuC-like BUMPUSDA_RS00890 a2a3dc0130af6f37ecbfaedf4db22c72 708 SUPERFAMILY SSF52540 1 230 7.43E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS00890 a2a3dc0130af6f37ecbfaedf4db22c72 708 Gene3D G3DSA:3.40.1390.20 222 363 1.2E-6 T 23-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like BUMPUSDA_RS00890 a2a3dc0130af6f37ecbfaedf4db22c72 708 Pfam PF01515 Phosphate acetyl/butaryl transferase 395 704 9.1E-115 T 23-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 BUMPUSDA_RS00890 a2a3dc0130af6f37ecbfaedf4db22c72 708 Pfam PF13500 AAA domain 5 227 4.0E-12 T 23-04-2016 BUMPUSDA_RS00890 a2a3dc0130af6f37ecbfaedf4db22c72 708 PANTHER PTHR23406:SF3 182 708 1.1E-48 T 23-04-2016 BUMPUSDA_RS00890 a2a3dc0130af6f37ecbfaedf4db22c72 708 SUPERFAMILY SSF53659 401 707 1.53E-83 T 23-04-2016 BUMPUSDA_RS00890 a2a3dc0130af6f37ecbfaedf4db22c72 708 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 405 704 5.2E-122 T 23-04-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 BUMPUSDA_RS00890 a2a3dc0130af6f37ecbfaedf4db22c72 708 PANTHER PTHR23406 182 708 1.1E-48 T 23-04-2016 BUMPUSDA_RS00890 a2a3dc0130af6f37ecbfaedf4db22c72 708 PIRSF PIRSF006107 1 708 4.3E-222 T 23-04-2016 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 BUMPUSDA_RS00890 a2a3dc0130af6f37ecbfaedf4db22c72 708 SUPERFAMILY SSF75138 229 350 4.32E-5 T 23-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like BUMPUSDA_RS00890 a2a3dc0130af6f37ecbfaedf4db22c72 708 Gene3D G3DSA:3.40.50.10750 522 681 1.0E-61 T 23-04-2016 BUMPUSDA_RS01000 60535af79d263f0e7b7d26677721d861 151 SUPERFAMILY SSF109635 9 109 3.79E-32 T 23-04-2016 BUMPUSDA_RS01000 60535af79d263f0e7b7d26677721d861 151 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 110 143 2.2E-11 T 23-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 BUMPUSDA_RS01000 60535af79d263f0e7b7d26677721d861 151 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 28 150 29.098 T 23-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 BUMPUSDA_RS01000 60535af79d263f0e7b7d26677721d861 151 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 32 140 4.8E-49 T 23-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 BUMPUSDA_RS01000 60535af79d263f0e7b7d26677721d861 151 SUPERFAMILY SSF57716 111 149 1.31E-9 T 23-04-2016 BUMPUSDA_RS01000 60535af79d263f0e7b7d26677721d861 151 PANTHER PTHR33823 8 149 5.2E-59 T 23-04-2016 BUMPUSDA_RS01000 60535af79d263f0e7b7d26677721d861 151 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 114 138 - T 23-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site BUMPUSDA_RS01000 60535af79d263f0e7b7d26677721d861 151 PANTHER PTHR33823:SF2 8 149 5.2E-59 T 23-04-2016 BUMPUSDA_RS02605 24f2f32ef659bad2eac8b7bd256072a9 101 Gene3D G3DSA:4.10.830.10 41 101 8.1E-31 T 23-04-2016 BUMPUSDA_RS02605 24f2f32ef659bad2eac8b7bd256072a9 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 23-04-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02605 24f2f32ef659bad2eac8b7bd256072a9 101 SUPERFAMILY SSF57716 2 101 9.98E-38 T 23-04-2016 BUMPUSDA_RS02605 24f2f32ef659bad2eac8b7bd256072a9 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 4.2E-26 T 23-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02605 24f2f32ef659bad2eac8b7bd256072a9 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.004 T 23-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid BUMPUSDA_RS02605 24f2f32ef659bad2eac8b7bd256072a9 101 PANTHER PTHR19836 1 101 2.2E-60 T 23-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02995 8d9bab70b3975eaeca43702681732889 246 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 1 246 33.288 T 23-04-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 BUMPUSDA_RS02995 8d9bab70b3975eaeca43702681732889 246 SUPERFAMILY SSF53335 8 244 1.83E-60 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BUMPUSDA_RS02995 8d9bab70b3975eaeca43702681732889 246 PANTHER PTHR36112 14 243 2.3E-76 T 23-04-2016 BUMPUSDA_RS02995 8d9bab70b3975eaeca43702681732889 246 Gene3D G3DSA:3.40.50.150 55 245 3.5E-64 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BUMPUSDA_RS02995 8d9bab70b3975eaeca43702681732889 246 Pfam PF04445 Putative SAM-dependent methyltransferase 17 244 9.0E-92 T 23-04-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 BUMPUSDA_RS02995 8d9bab70b3975eaeca43702681732889 246 PANTHER PTHR36112:SF1 14 243 2.3E-76 T 23-04-2016 BUMPUSDA_RS01050 d04ad7440c3109cd5dc82c4d818c5c21 267 Pfam PF02675 S-adenosylmethionine decarboxylase 37 168 2.1E-27 T 23-04-2016 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 BUMPUSDA_RS01050 d04ad7440c3109cd5dc82c4d818c5c21 267 PANTHER PTHR33866:SF1 111 262 2.7E-143 T 23-04-2016 BUMPUSDA_RS01050 d04ad7440c3109cd5dc82c4d818c5c21 267 SUPERFAMILY SSF56276 111 172 9.02E-21 T 23-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 BUMPUSDA_RS01050 d04ad7440c3109cd5dc82c4d818c5c21 267 SUPERFAMILY SSF56276 44 84 9.02E-21 T 23-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 BUMPUSDA_RS01050 d04ad7440c3109cd5dc82c4d818c5c21 267 Gene3D G3DSA:3.60.90.10 35 184 5.5E-42 T 23-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 BUMPUSDA_RS01050 d04ad7440c3109cd5dc82c4d818c5c21 267 PANTHER PTHR33866:SF1 15 84 2.7E-143 T 23-04-2016 BUMPUSDA_RS01050 d04ad7440c3109cd5dc82c4d818c5c21 267 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 3 260 1.8E-138 T 23-04-2016 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 BUMPUSDA_RS01050 d04ad7440c3109cd5dc82c4d818c5c21 267 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 267 154.906 T 23-04-2016 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 BUMPUSDA_RS01050 d04ad7440c3109cd5dc82c4d818c5c21 267 PIRSF PIRSF001356 1 262 8.1E-150 T 23-04-2016 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 BUMPUSDA_RS01050 d04ad7440c3109cd5dc82c4d818c5c21 267 PANTHER PTHR33866 15 84 2.7E-143 T 23-04-2016 BUMPUSDA_RS01050 d04ad7440c3109cd5dc82c4d818c5c21 267 PANTHER PTHR33866 111 262 2.7E-143 T 23-04-2016 BUMPUSDA_RS00755 37624642e4fe39aa3ca241678555f201 313 PIRSF PIRSF004491 1 313 6.4E-98 T 23-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 BUMPUSDA_RS00755 37624642e4fe39aa3ca241678555f201 313 Gene3D G3DSA:2.40.30.30 188 309 6.0E-32 T 23-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 BUMPUSDA_RS00755 37624642e4fe39aa3ca241678555f201 313 PANTHER PTHR22749 1 313 3.4E-102 T 23-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 BUMPUSDA_RS00755 37624642e4fe39aa3ca241678555f201 313 SMART SM00904 183 309 6.7E-44 T 23-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 BUMPUSDA_RS00755 37624642e4fe39aa3ca241678555f201 313 Gene3D G3DSA:3.40.50.620 1 186 3.1E-56 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BUMPUSDA_RS00755 37624642e4fe39aa3ca241678555f201 313 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 19 309 5.9E-87 T 23-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 BUMPUSDA_RS00755 37624642e4fe39aa3ca241678555f201 313 Pfam PF06574 FAD synthetase 12 166 1.3E-50 T 23-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 BUMPUSDA_RS00755 37624642e4fe39aa3ca241678555f201 313 SUPERFAMILY SSF82114 174 309 2.83E-36 T 23-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 BUMPUSDA_RS00755 37624642e4fe39aa3ca241678555f201 313 Pfam PF01687 Riboflavin kinase 184 307 8.5E-29 T 23-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 BUMPUSDA_RS00755 37624642e4fe39aa3ca241678555f201 313 PANTHER PTHR22749:SF0 1 313 3.4E-102 T 23-04-2016 BUMPUSDA_RS00755 37624642e4fe39aa3ca241678555f201 313 SUPERFAMILY SSF52374 17 175 1.01E-30 T 23-04-2016 BUMPUSDA_RS01160 874f98e6ffcb61842eca05afc099cd06 264 PANTHER PTHR10804 1 256 2.7E-150 T 23-04-2016 BUMPUSDA_RS01160 874f98e6ffcb61842eca05afc099cd06 264 SUPERFAMILY SSF55920 4 252 1.7E-83 T 23-04-2016 IPR000994 Peptidase M24, structural domain BUMPUSDA_RS01160 874f98e6ffcb61842eca05afc099cd06 264 Pfam PF00557 Metallopeptidase family M24 13 242 5.9E-50 T 23-04-2016 IPR000994 Peptidase M24, structural domain BUMPUSDA_RS01160 874f98e6ffcb61842eca05afc099cd06 264 PANTHER PTHR10804:SF75 1 256 2.7E-150 T 23-04-2016 BUMPUSDA_RS01160 874f98e6ffcb61842eca05afc099cd06 264 Hamap MF_01974 Methionine aminopeptidase [map]. 4 251 41.517 T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 BUMPUSDA_RS01160 874f98e6ffcb61842eca05afc099cd06 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 1.6E-21 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase BUMPUSDA_RS01160 874f98e6ffcb61842eca05afc099cd06 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 92 108 1.6E-21 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase BUMPUSDA_RS01160 874f98e6ffcb61842eca05afc099cd06 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 162 174 1.6E-21 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase BUMPUSDA_RS01160 874f98e6ffcb61842eca05afc099cd06 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 1.6E-21 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase BUMPUSDA_RS01160 874f98e6ffcb61842eca05afc099cd06 264 Gene3D G3DSA:3.90.230.10 5 254 4.8E-91 T 23-04-2016 IPR000994 Peptidase M24, structural domain BUMPUSDA_RS01160 874f98e6ffcb61842eca05afc099cd06 264 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 249 4.5E-99 T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 BUMPUSDA_RS01160 874f98e6ffcb61842eca05afc099cd06 264 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 168 186 - T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 BUMPUSDA_RS00155 41942cf546259cce363d16c81ab84d6c 753 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 750 0.0 T 23-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 BUMPUSDA_RS00155 41942cf546259cce363d16c81ab84d6c 753 SUPERFAMILY SSF51726 388 749 6.02E-110 T 23-04-2016 BUMPUSDA_RS00155 41942cf546259cce363d16c81ab84d6c 753 PANTHER PTHR30519:SF0 1 753 0.0 T 23-04-2016 BUMPUSDA_RS00155 41942cf546259cce363d16c81ab84d6c 753 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 423 745 4.0E-149 T 23-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 BUMPUSDA_RS00155 41942cf546259cce363d16c81ab84d6c 753 SUPERFAMILY SSF51726 5 377 1.05E-102 T 23-04-2016 BUMPUSDA_RS00155 41942cf546259cce363d16c81ab84d6c 753 Gene3D G3DSA:3.20.20.210 5 364 9.0E-134 T 23-04-2016 BUMPUSDA_RS00155 41942cf546259cce363d16c81ab84d6c 753 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 750 35.627 T 23-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 BUMPUSDA_RS00155 41942cf546259cce363d16c81ab84d6c 753 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 310 1.0E-119 T 23-04-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 BUMPUSDA_RS00155 41942cf546259cce363d16c81ab84d6c 753 PIRSF PIRSF000382 2 753 0.0 T 23-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 BUMPUSDA_RS00155 41942cf546259cce363d16c81ab84d6c 753 Gene3D G3DSA:3.20.20.210 384 752 5.9E-123 T 23-04-2016 BUMPUSDA_RS00155 41942cf546259cce363d16c81ab84d6c 753 PANTHER PTHR30519 1 753 0.0 T 23-04-2016 BUMPUSDA_RS02885 3fc571f1eb97a219a58b417b4cd101d0 429 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 426 6.8E-169 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 BUMPUSDA_RS02885 3fc571f1eb97a219a58b417b4cd101d0 429 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 429 177.148 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 BUMPUSDA_RS02885 3fc571f1eb97a219a58b417b4cd101d0 429 Pfam PF00709 Adenylosuccinate synthetase 5 423 1.0E-161 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 BUMPUSDA_RS02885 3fc571f1eb97a219a58b417b4cd101d0 429 Gene3D G3DSA:3.90.170.10 267 425 1.2E-59 T 23-04-2016 BUMPUSDA_RS02885 3fc571f1eb97a219a58b417b4cd101d0 429 Gene3D G3DSA:3.40.440.10 3 94 9.9E-67 T 23-04-2016 BUMPUSDA_RS02885 3fc571f1eb97a219a58b417b4cd101d0 429 Gene3D G3DSA:3.40.440.10 193 266 9.9E-67 T 23-04-2016 BUMPUSDA_RS02885 3fc571f1eb97a219a58b417b4cd101d0 429 SUPERFAMILY SSF52540 3 427 1.17E-162 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02885 3fc571f1eb97a219a58b417b4cd101d0 429 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 23-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 BUMPUSDA_RS02885 3fc571f1eb97a219a58b417b4cd101d0 429 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 23-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 BUMPUSDA_RS02885 3fc571f1eb97a219a58b417b4cd101d0 429 Gene3D G3DSA:1.10.300.10 104 192 1.4E-27 T 23-04-2016 BUMPUSDA_RS02885 3fc571f1eb97a219a58b417b4cd101d0 429 PANTHER PTHR11846 1 428 1.0E-210 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 BUMPUSDA_RS02885 3fc571f1eb97a219a58b417b4cd101d0 429 SMART SM00788 4 424 5.2E-255 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 BUMPUSDA_RS02030 a280edec143a29d39c875b8f61fa84f6 315 PANTHER PTHR11079 5 312 1.9E-113 T 23-04-2016 BUMPUSDA_RS02030 a280edec143a29d39c875b8f61fa84f6 315 Pfam PF01479 S4 domain 19 62 5.3E-6 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 BUMPUSDA_RS02030 a280edec143a29d39c875b8f61fa84f6 315 SUPERFAMILY SSF55174 18 105 1.31E-9 T 23-04-2016 BUMPUSDA_RS02030 a280edec143a29d39c875b8f61fa84f6 315 SUPERFAMILY SSF55120 79 311 7.4E-73 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 BUMPUSDA_RS02030 a280edec143a29d39c875b8f61fa84f6 315 Pfam PF00849 RNA pseudouridylate synthase 92 241 6.8E-35 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BUMPUSDA_RS02030 a280edec143a29d39c875b8f61fa84f6 315 PANTHER PTHR11079:SF73 5 312 1.9E-113 T 23-04-2016 BUMPUSDA_RS02030 a280edec143a29d39c875b8f61fa84f6 315 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 23-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 BUMPUSDA_RS02030 a280edec143a29d39c875b8f61fa84f6 315 Gene3D G3DSA:3.10.290.10 19 67 1.3E-8 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 BUMPUSDA_RS02030 a280edec143a29d39c875b8f61fa84f6 315 SMART SM00363 18 82 3.3E-7 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 BUMPUSDA_RS02030 a280edec143a29d39c875b8f61fa84f6 315 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 311 3.1E-93 T 23-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 BUMPUSDA_RS00140 8566dcac1314229b3665e428fe1e9528 456 Pfam PF12804 MobA-like NTP transferase domain 8 123 3.1E-19 T 23-04-2016 IPR025877 MobA-like NTP transferase BUMPUSDA_RS00140 8566dcac1314229b3665e428fe1e9528 456 SUPERFAMILY SSF51161 256 438 2.36E-44 T 23-04-2016 IPR011004 Trimeric LpxA-like BUMPUSDA_RS00140 8566dcac1314229b3665e428fe1e9528 456 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 7 454 3.9E-176 T 23-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 BUMPUSDA_RS00140 8566dcac1314229b3665e428fe1e9528 456 Gene3D G3DSA:2.160.10.10 257 322 6.5E-14 T 23-04-2016 BUMPUSDA_RS00140 8566dcac1314229b3665e428fe1e9528 456 Gene3D G3DSA:2.160.10.10 323 449 4.7E-30 T 23-04-2016 BUMPUSDA_RS00140 8566dcac1314229b3665e428fe1e9528 456 PANTHER PTHR22572:SF115 7 449 6.2E-161 T 23-04-2016 BUMPUSDA_RS00140 8566dcac1314229b3665e428fe1e9528 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 395 427 6.9E-6 T 23-04-2016 IPR001451 Hexapeptide repeat BUMPUSDA_RS00140 8566dcac1314229b3665e428fe1e9528 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 317 349 4.8E-7 T 23-04-2016 IPR001451 Hexapeptide repeat BUMPUSDA_RS00140 8566dcac1314229b3665e428fe1e9528 456 SUPERFAMILY SSF53448 6 252 2.71E-51 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases BUMPUSDA_RS00140 8566dcac1314229b3665e428fe1e9528 456 Gene3D G3DSA:3.90.550.10 3 248 4.0E-59 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases BUMPUSDA_RS00140 8566dcac1314229b3665e428fe1e9528 456 PANTHER PTHR22572 7 449 6.2E-161 T 23-04-2016 BUMPUSDA_RS00140 8566dcac1314229b3665e428fe1e9528 456 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 5 452 36.733 T 23-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 BUMPUSDA_RS03090 f136094d27d389b4088daddc16bb3469 602 PRINTS PR00301 70kDa heat shock protein signature 377 396 6.9E-45 T 23-04-2016 IPR013126 Heat shock protein 70 family BUMPUSDA_RS03090 f136094d27d389b4088daddc16bb3469 602 PRINTS PR00301 70kDa heat shock protein signature 352 372 6.9E-45 T 23-04-2016 IPR013126 Heat shock protein 70 family BUMPUSDA_RS03090 f136094d27d389b4088daddc16bb3469 602 PRINTS PR00301 70kDa heat shock protein signature 144 164 6.9E-45 T 23-04-2016 IPR013126 Heat shock protein 70 family BUMPUSDA_RS03090 f136094d27d389b4088daddc16bb3469 602 PRINTS PR00301 70kDa heat shock protein signature 321 337 6.9E-45 T 23-04-2016 IPR013126 Heat shock protein 70 family BUMPUSDA_RS03090 f136094d27d389b4088daddc16bb3469 602 PRINTS PR00301 70kDa heat shock protein signature 458 474 6.9E-45 T 23-04-2016 IPR013126 Heat shock protein 70 family BUMPUSDA_RS03090 f136094d27d389b4088daddc16bb3469 602 PRINTS PR00301 70kDa heat shock protein signature 203 213 6.9E-45 T 23-04-2016 IPR013126 Heat shock protein 70 family BUMPUSDA_RS03090 f136094d27d389b4088daddc16bb3469 602 PRINTS PR00301 70kDa heat shock protein signature 12 25 6.9E-45 T 23-04-2016 IPR013126 Heat shock protein 70 family BUMPUSDA_RS03090 f136094d27d389b4088daddc16bb3469 602 Gene3D G3DSA:3.30.30.30 62 108 3.0E-6 T 23-04-2016 BUMPUSDA_RS03090 f136094d27d389b4088daddc16bb3469 602 Gene3D G3DSA:3.30.420.40 198 231 4.5E-30 T 23-04-2016 BUMPUSDA_RS03090 f136094d27d389b4088daddc16bb3469 602 Gene3D G3DSA:3.30.420.40 306 347 4.5E-30 T 23-04-2016 BUMPUSDA_RS03090 f136094d27d389b4088daddc16bb3469 602 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 16 23 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site BUMPUSDA_RS03090 f136094d27d389b4088daddc16bb3469 602 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 324 338 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site BUMPUSDA_RS03090 f136094d27d389b4088daddc16bb3469 602 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 602 39.126 T 23-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 BUMPUSDA_RS03090 f136094d27d389b4088daddc16bb3469 602 SUPERFAMILY SSF53067 12 188 1.25E-43 T 23-04-2016 BUMPUSDA_RS03090 f136094d27d389b4088daddc16bb3469 602 Gene3D G3DSA:3.30.420.40 13 61 1.1E-41 T 23-04-2016 BUMPUSDA_RS03090 f136094d27d389b4088daddc16bb3469 602 Gene3D G3DSA:3.30.420.40 125 197 1.1E-41 T 23-04-2016 BUMPUSDA_RS03090 f136094d27d389b4088daddc16bb3469 602 PANTHER PTHR19375:SF176 11 568 1.8E-198 T 23-04-2016 BUMPUSDA_RS03090 f136094d27d389b4088daddc16bb3469 602 Gene3D G3DSA:1.20.1270.10 520 598 1.4E-12 T 23-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain BUMPUSDA_RS03090 f136094d27d389b4088daddc16bb3469 602 SUPERFAMILY SSF100920 377 527 3.53E-43 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain BUMPUSDA_RS03090 f136094d27d389b4088daddc16bb3469 602 Pfam PF00012 Hsp70 protein 14 588 2.0E-151 T 23-04-2016 IPR013126 Heat shock protein 70 family BUMPUSDA_RS03090 f136094d27d389b4088daddc16bb3469 602 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 197 210 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site BUMPUSDA_RS03090 f136094d27d389b4088daddc16bb3469 602 PANTHER PTHR19375 11 568 1.8E-198 T 23-04-2016 BUMPUSDA_RS03090 f136094d27d389b4088daddc16bb3469 602 Gene3D G3DSA:2.60.34.10 379 519 1.2E-46 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain BUMPUSDA_RS03090 f136094d27d389b4088daddc16bb3469 602 SUPERFAMILY SSF100934 500 597 9.02E-16 T 23-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain BUMPUSDA_RS03090 f136094d27d389b4088daddc16bb3469 602 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 14 600 3.1E-246 T 23-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 BUMPUSDA_RS03090 f136094d27d389b4088daddc16bb3469 602 SUPERFAMILY SSF53067 192 369 1.04E-44 T 23-04-2016 BUMPUSDA_RS00250 f81d7edc1c6e5719ce3162ccbdd0f4a4 258 Gene3D G3DSA:3.40.1160.10 4 256 5.9E-68 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 BUMPUSDA_RS00250 f81d7edc1c6e5719ce3162ccbdd0f4a4 258 PIRSF PIRSF000728 1 258 1.4E-66 T 23-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 BUMPUSDA_RS00250 f81d7edc1c6e5719ce3162ccbdd0f4a4 258 TIGRFAM TIGR00761 argB: acetylglutamate kinase 5 234 3.1E-64 T 23-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 BUMPUSDA_RS00250 f81d7edc1c6e5719ce3162ccbdd0f4a4 258 PANTHER PTHR23342 3 256 4.9E-71 T 23-04-2016 BUMPUSDA_RS00250 f81d7edc1c6e5719ce3162ccbdd0f4a4 258 Hamap MF_00082_B Acetylglutamate kinase [argB]. 1 258 25.271 T 23-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 BUMPUSDA_RS00250 f81d7edc1c6e5719ce3162ccbdd0f4a4 258 Pfam PF00696 Amino acid kinase family 5 232 1.3E-33 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 BUMPUSDA_RS00250 f81d7edc1c6e5719ce3162ccbdd0f4a4 258 SUPERFAMILY SSF53633 3 256 8.64E-53 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 BUMPUSDA_RS01810 55e31f1df397e6e118c0321163cba569 478 PANTHER PTHR30009 6 475 7.8E-223 T 23-04-2016 BUMPUSDA_RS01810 55e31f1df397e6e118c0321163cba569 478 Pfam PF02378 Phosphotransferase system, EIIC 13 320 5.5E-82 T 23-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BUMPUSDA_RS01810 55e31f1df397e6e118c0321163cba569 478 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 414 431 - T 23-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BUMPUSDA_RS01810 55e31f1df397e6e118c0321163cba569 478 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 475 1.5E-203 T 23-04-2016 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0015758|GO:0016021 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- BUMPUSDA_RS01810 55e31f1df397e6e118c0321163cba569 478 SUPERFAMILY SSF55604 401 474 1.44E-20 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 BUMPUSDA_RS01810 55e31f1df397e6e118c0321163cba569 478 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 379 460 4.5E-19 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 BUMPUSDA_RS01810 55e31f1df397e6e118c0321163cba569 478 Pfam PF00367 phosphotransferase system, EIIB 405 436 3.2E-12 T 23-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BUMPUSDA_RS01810 55e31f1df397e6e118c0321163cba569 478 PANTHER PTHR30009:SF2 6 475 7.8E-223 T 23-04-2016 BUMPUSDA_RS01810 55e31f1df397e6e118c0321163cba569 478 Gene3D G3DSA:3.30.1360.60 400 475 3.4E-25 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 BUMPUSDA_RS00765 e0d9e86bb7a9d16732b2cadce073579e 378 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 372 39.552 T 23-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 BUMPUSDA_RS00765 e0d9e86bb7a9d16732b2cadce073579e 378 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 23-04-2016 IPR018253 DnaJ domain, conserved site BUMPUSDA_RS00765 e0d9e86bb7a9d16732b2cadce073579e 378 SUPERFAMILY SSF57938 133 209 1.96E-21 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 BUMPUSDA_RS00765 e0d9e86bb7a9d16732b2cadce073579e 378 PANTHER PTHR24078 1 346 4.2E-148 T 23-04-2016 BUMPUSDA_RS00765 e0d9e86bb7a9d16732b2cadce073579e 378 SMART SM00271 4 62 2.3E-27 T 23-04-2016 IPR001623 DnaJ domain BUMPUSDA_RS00765 e0d9e86bb7a9d16732b2cadce073579e 378 SUPERFAMILY SSF49493 258 343 2.35E-20 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 BUMPUSDA_RS00765 e0d9e86bb7a9d16732b2cadce073579e 378 SUPERFAMILY SSF49493 113 137 3.14E-20 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 BUMPUSDA_RS00765 e0d9e86bb7a9d16732b2cadce073579e 378 PRINTS PR00625 DnaJ domain signature 62 81 2.7E-30 T 23-04-2016 IPR001623 DnaJ domain BUMPUSDA_RS00765 e0d9e86bb7a9d16732b2cadce073579e 378 PRINTS PR00625 DnaJ domain signature 7 25 2.7E-30 T 23-04-2016 IPR001623 DnaJ domain BUMPUSDA_RS00765 e0d9e86bb7a9d16732b2cadce073579e 378 PRINTS PR00625 DnaJ domain signature 42 62 2.7E-30 T 23-04-2016 IPR001623 DnaJ domain BUMPUSDA_RS00765 e0d9e86bb7a9d16732b2cadce073579e 378 PRINTS PR00625 DnaJ domain signature 25 40 2.7E-30 T 23-04-2016 IPR001623 DnaJ domain BUMPUSDA_RS00765 e0d9e86bb7a9d16732b2cadce073579e 378 SUPERFAMILY SSF49493 185 266 3.14E-20 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 BUMPUSDA_RS00765 e0d9e86bb7a9d16732b2cadce073579e 378 PANTHER PTHR24078:SF231 1 346 4.2E-148 T 23-04-2016 BUMPUSDA_RS00765 e0d9e86bb7a9d16732b2cadce073579e 378 Gene3D G3DSA:2.60.260.20 114 135 4.7E-20 T 23-04-2016 BUMPUSDA_RS00765 e0d9e86bb7a9d16732b2cadce073579e 378 Gene3D G3DSA:2.60.260.20 255 332 3.7E-22 T 23-04-2016 BUMPUSDA_RS00765 e0d9e86bb7a9d16732b2cadce073579e 378 Gene3D G3DSA:2.60.260.20 198 253 4.7E-20 T 23-04-2016 BUMPUSDA_RS00765 e0d9e86bb7a9d16732b2cadce073579e 378 Pfam PF01556 DnaJ C terminal domain 121 332 1.0E-42 T 23-04-2016 IPR002939 Chaperone DnaJ, C-terminal BUMPUSDA_RS00765 e0d9e86bb7a9d16732b2cadce073579e 378 Gene3D G3DSA:2.10.230.10 136 197 5.6E-23 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 BUMPUSDA_RS00765 e0d9e86bb7a9d16732b2cadce073579e 378 Pfam PF00226 DnaJ domain 5 67 4.0E-27 T 23-04-2016 IPR001623 DnaJ domain BUMPUSDA_RS00765 e0d9e86bb7a9d16732b2cadce073579e 378 Gene3D G3DSA:1.10.287.110 1 89 8.1E-35 T 23-04-2016 IPR001623 DnaJ domain BUMPUSDA_RS00765 e0d9e86bb7a9d16732b2cadce073579e 378 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 348 1.2E-136 T 23-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 BUMPUSDA_RS00765 e0d9e86bb7a9d16732b2cadce073579e 378 Pfam PF00684 DnaJ central domain 146 206 4.5E-13 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 BUMPUSDA_RS00765 e0d9e86bb7a9d16732b2cadce073579e 378 SUPERFAMILY SSF46565 1 107 1.96E-33 T 23-04-2016 IPR001623 DnaJ domain BUMPUSDA_RS02345 94bf82d1f28fcb354b74e6edfa5ecc0f 147 SUPERFAMILY SSF53927 3 144 4.68E-45 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 BUMPUSDA_RS02345 94bf82d1f28fcb354b74e6edfa5ecc0f 147 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 50 88 - T 23-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 BUMPUSDA_RS02345 94bf82d1f28fcb354b74e6edfa5ecc0f 147 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 99 2.2E-20 T 23-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 BUMPUSDA_RS02345 94bf82d1f28fcb354b74e6edfa5ecc0f 147 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 7 147 3.7E-63 T 23-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 BUMPUSDA_RS02345 94bf82d1f28fcb354b74e6edfa5ecc0f 147 PANTHER PTHR11079:SF10 2 147 9.8E-38 T 23-04-2016 BUMPUSDA_RS02345 94bf82d1f28fcb354b74e6edfa5ecc0f 147 Gene3D G3DSA:3.40.140.10 2 143 1.7E-32 T 23-04-2016 BUMPUSDA_RS02345 94bf82d1f28fcb354b74e6edfa5ecc0f 147 PANTHER PTHR11079 2 147 9.8E-38 T 23-04-2016 BUMPUSDA_RS00335 63cd5ef47720e0a9c67e8e747d886a21 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 312 9.3E-131 T 23-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 BUMPUSDA_RS00335 63cd5ef47720e0a9c67e8e747d886a21 322 PANTHER PTHR10314:SF110 3 321 1.4E-150 T 23-04-2016 BUMPUSDA_RS00335 63cd5ef47720e0a9c67e8e747d886a21 322 Gene3D G3DSA:3.40.50.1100 36 129 8.4E-33 T 23-04-2016 BUMPUSDA_RS00335 63cd5ef47720e0a9c67e8e747d886a21 322 Gene3D G3DSA:3.40.50.1100 130 313 1.3E-68 T 23-04-2016 BUMPUSDA_RS00335 63cd5ef47720e0a9c67e8e747d886a21 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 312 4.9E-139 T 23-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 BUMPUSDA_RS00335 63cd5ef47720e0a9c67e8e747d886a21 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 300 1.5E-62 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme BUMPUSDA_RS00335 63cd5ef47720e0a9c67e8e747d886a21 322 SUPERFAMILY SSF53686 4 309 1.83E-89 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme BUMPUSDA_RS00335 63cd5ef47720e0a9c67e8e747d886a21 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 23-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 BUMPUSDA_RS00335 63cd5ef47720e0a9c67e8e747d886a21 322 PANTHER PTHR10314 3 321 1.4E-150 T 23-04-2016 BUMPUSDA_RS01085 d39da4da9c1e0cc0c06b81ffc1f4fc35 449 SUPERFAMILY SSF53244 292 444 6.41E-37 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 BUMPUSDA_RS01085 d39da4da9c1e0cc0c06b81ffc1f4fc35 449 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 1 449 34.65 T 23-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 BUMPUSDA_RS01085 d39da4da9c1e0cc0c06b81ffc1f4fc35 449 PANTHER PTHR23135:SF5 1 439 4.3E-169 T 23-04-2016 BUMPUSDA_RS01085 d39da4da9c1e0cc0c06b81ffc1f4fc35 449 Pfam PF02875 Mur ligase family, glutamate ligase domain 295 387 1.2E-21 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 BUMPUSDA_RS01085 d39da4da9c1e0cc0c06b81ffc1f4fc35 449 Gene3D G3DSA:3.40.50.720 1 75 1.3E-21 T 23-04-2016 IPR016040 NAD(P)-binding domain BUMPUSDA_RS01085 d39da4da9c1e0cc0c06b81ffc1f4fc35 449 Pfam PF08245 Mur ligase middle domain 93 273 7.5E-32 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 BUMPUSDA_RS01085 d39da4da9c1e0cc0c06b81ffc1f4fc35 449 Gene3D G3DSA:3.90.190.20 296 445 2.8E-43 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 BUMPUSDA_RS01085 d39da4da9c1e0cc0c06b81ffc1f4fc35 449 SUPERFAMILY SSF51984 1 74 1.24E-17 T 23-04-2016 BUMPUSDA_RS01085 d39da4da9c1e0cc0c06b81ffc1f4fc35 449 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 1 444 3.3E-143 T 23-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 BUMPUSDA_RS01085 d39da4da9c1e0cc0c06b81ffc1f4fc35 449 SUPERFAMILY SSF53623 74 291 1.44E-66 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 BUMPUSDA_RS01085 d39da4da9c1e0cc0c06b81ffc1f4fc35 449 Gene3D G3DSA:3.40.1190.10 77 295 2.4E-71 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 BUMPUSDA_RS01085 d39da4da9c1e0cc0c06b81ffc1f4fc35 449 Pfam PF01225 Mur ligase family, catalytic domain 1 87 1.0E-14 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 BUMPUSDA_RS01085 d39da4da9c1e0cc0c06b81ffc1f4fc35 449 PANTHER PTHR23135 1 439 4.3E-169 T 23-04-2016 BUMPUSDA_RS00715 524b7363ea9b179b3e75305d59eafe2d 271 SUPERFAMILY SSF56300 1 247 4.1E-47 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like BUMPUSDA_RS00715 524b7363ea9b179b3e75305d59eafe2d 271 Pfam PF00149 Calcineurin-like phosphoesterase 2 149 9.8E-15 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 BUMPUSDA_RS00715 524b7363ea9b179b3e75305d59eafe2d 271 PANTHER PTHR24032 1 267 7.8E-109 T 23-04-2016 BUMPUSDA_RS00715 524b7363ea9b179b3e75305d59eafe2d 271 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 271 46.159 T 23-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 BUMPUSDA_RS00715 524b7363ea9b179b3e75305d59eafe2d 271 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 267 1.0E-102 T 23-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 BUMPUSDA_RS00715 524b7363ea9b179b3e75305d59eafe2d 271 PIRSF PIRSF000903 1 271 1.7E-114 T 23-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 BUMPUSDA_RS00715 524b7363ea9b179b3e75305d59eafe2d 271 PANTHER PTHR24032:SF27 1 267 7.8E-109 T 23-04-2016 BUMPUSDA_RS00715 524b7363ea9b179b3e75305d59eafe2d 271 Gene3D G3DSA:3.60.21.10 1 132 2.8E-46 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like BUMPUSDA_RS00715 524b7363ea9b179b3e75305d59eafe2d 271 Gene3D G3DSA:3.60.21.10 169 267 2.8E-46 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like BUMPUSDA_RS01410 b991c1db38766e13635c004b13ff3cab 453 SUPERFAMILY SSF51366 258 451 2.51E-53 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 BUMPUSDA_RS01410 b991c1db38766e13635c004b13ff3cab 453 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 51 69 - T 23-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 BUMPUSDA_RS01410 b991c1db38766e13635c004b13ff3cab 453 Gene3D G3DSA:3.20.20.70 260 445 1.7E-56 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 BUMPUSDA_RS01410 b991c1db38766e13635c004b13ff3cab 453 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 258 448 1.9E-45 T 23-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 BUMPUSDA_RS01410 b991c1db38766e13635c004b13ff3cab 453 Gene3D G3DSA:3.20.20.70 3 259 4.7E-94 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 BUMPUSDA_RS01410 b991c1db38766e13635c004b13ff3cab 453 PANTHER PTHR22854:SF2 2 283 3.9E-118 T 23-04-2016 BUMPUSDA_RS01410 b991c1db38766e13635c004b13ff3cab 453 Pfam PF00218 Indole-3-glycerol phosphate synthase 6 251 1.8E-89 T 23-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 BUMPUSDA_RS01410 b991c1db38766e13635c004b13ff3cab 453 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 256 453 25.859 T 23-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 BUMPUSDA_RS01410 b991c1db38766e13635c004b13ff3cab 453 PANTHER PTHR22854 2 283 3.9E-118 T 23-04-2016 BUMPUSDA_RS01410 b991c1db38766e13635c004b13ff3cab 453 SUPERFAMILY SSF51366 13 252 6.24E-77 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 BUMPUSDA_RS01410 b991c1db38766e13635c004b13ff3cab 453 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 4 255 33.381 T 23-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 BUMPUSDA_RS01460 370444563cd56becf9cf47ae4c49e0e1 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 23-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 BUMPUSDA_RS01460 370444563cd56becf9cf47ae4c49e0e1 417 Gene3D G3DSA:3.40.640.10 37 285 8.8E-101 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 BUMPUSDA_RS01460 370444563cd56becf9cf47ae4c49e0e1 417 PIRSF PIRSF000412 2 416 2.0E-164 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 BUMPUSDA_RS01460 370444563cd56becf9cf47ae4c49e0e1 417 Pfam PF00464 Serine hydroxymethyltransferase 9 386 1.9E-178 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 BUMPUSDA_RS01460 370444563cd56becf9cf47ae4c49e0e1 417 Gene3D G3DSA:3.90.1150.10 286 416 1.9E-52 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 BUMPUSDA_RS01460 370444563cd56becf9cf47ae4c49e0e1 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 51.114 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 BUMPUSDA_RS01460 370444563cd56becf9cf47ae4c49e0e1 417 SUPERFAMILY SSF53383 8 416 2.06E-172 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase BUMPUSDA_RS01460 370444563cd56becf9cf47ae4c49e0e1 417 PANTHER PTHR11680 11 416 2.1E-272 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 BUMPUSDA_RS01460 370444563cd56becf9cf47ae4c49e0e1 417 PANTHER PTHR11680:SF9 11 416 2.1E-272 T 23-04-2016 BUMPUSDA_RS01040 1d901a3da1d5a265f67a984b6390a081 396 Gene3D G3DSA:4.10.320.10 106 145 3.3E-16 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 BUMPUSDA_RS01040 1d901a3da1d5a265f67a984b6390a081 396 Gene3D G3DSA:2.40.50.100 2 67 8.7E-15 T 23-04-2016 BUMPUSDA_RS01040 1d901a3da1d5a265f67a984b6390a081 396 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 168 394 8.3E-77 T 23-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 BUMPUSDA_RS01040 1d901a3da1d5a265f67a984b6390a081 396 PANTHER PTHR23151:SF68 1 396 3.0E-159 T 23-04-2016 BUMPUSDA_RS01040 1d901a3da1d5a265f67a984b6390a081 396 Pfam PF02817 e3 binding domain 106 141 3.2E-14 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 BUMPUSDA_RS01040 1d901a3da1d5a265f67a984b6390a081 396 Gene3D G3DSA:3.30.559.10 168 396 4.6E-76 T 23-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain BUMPUSDA_RS01040 1d901a3da1d5a265f67a984b6390a081 396 PANTHER PTHR23151 1 396 3.0E-159 T 23-04-2016 BUMPUSDA_RS01040 1d901a3da1d5a265f67a984b6390a081 396 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 19 48 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site BUMPUSDA_RS01040 1d901a3da1d5a265f67a984b6390a081 396 SUPERFAMILY SSF47005 102 144 1.15E-10 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 BUMPUSDA_RS01040 1d901a3da1d5a265f67a984b6390a081 396 Pfam PF00364 Biotin-requiring enzyme 2 67 1.4E-13 T 23-04-2016 IPR000089 Biotin/lipoyl attachment BUMPUSDA_RS01040 1d901a3da1d5a265f67a984b6390a081 396 SUPERFAMILY SSF52777 169 395 4.45E-76 T 23-04-2016 BUMPUSDA_RS01040 1d901a3da1d5a265f67a984b6390a081 396 SUPERFAMILY SSF51230 2 79 3.8E-16 T 23-04-2016 IPR011053 Single hybrid motif BUMPUSDA_RS01580 8eb951f2e04900f94ae9ff1e50b2455b 429 PANTHER PTHR21090 7 422 3.4E-181 T 23-04-2016 BUMPUSDA_RS01580 8eb951f2e04900f94ae9ff1e50b2455b 429 PIRSF PIRSF000505 4 428 4.5E-140 T 23-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 BUMPUSDA_RS01580 8eb951f2e04900f94ae9ff1e50b2455b 429 ProSitePatterns PS00104 EPSP synthase signature 1. 91 105 - T 23-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 BUMPUSDA_RS01580 8eb951f2e04900f94ae9ff1e50b2455b 429 Gene3D G3DSA:3.65.10.10 23 239 3.8E-57 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 BUMPUSDA_RS01580 8eb951f2e04900f94ae9ff1e50b2455b 429 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 15 425 9.8E-132 T 23-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 BUMPUSDA_RS01580 8eb951f2e04900f94ae9ff1e50b2455b 429 Gene3D G3DSA:3.65.10.10 240 420 5.3E-64 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 BUMPUSDA_RS01580 8eb951f2e04900f94ae9ff1e50b2455b 429 ProSitePatterns PS00885 EPSP synthase signature 2. 340 358 - T 23-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 BUMPUSDA_RS01580 8eb951f2e04900f94ae9ff1e50b2455b 429 PANTHER PTHR21090:SF21 7 422 3.4E-181 T 23-04-2016 BUMPUSDA_RS01580 8eb951f2e04900f94ae9ff1e50b2455b 429 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 420 6.3E-140 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 BUMPUSDA_RS01580 8eb951f2e04900f94ae9ff1e50b2455b 429 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 11 428 34.321 T 23-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 BUMPUSDA_RS01580 8eb951f2e04900f94ae9ff1e50b2455b 429 SUPERFAMILY SSF55205 6 424 8.37E-132 T 23-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 BUMPUSDA_RS00970 326a88b95482f5c8b78db0b18829713d 428 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 100 366 2.1E-19 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme BUMPUSDA_RS00970 326a88b95482f5c8b78db0b18829713d 428 TIGRFAM TIGR00260 thrC: threonine synthase 52 399 3.5E-110 T 23-04-2016 IPR004450 Threonine synthase-like BUMPUSDA_RS00970 326a88b95482f5c8b78db0b18829713d 428 PANTHER PTHR10314 53 426 2.6E-130 T 23-04-2016 BUMPUSDA_RS00970 326a88b95482f5c8b78db0b18829713d 428 PANTHER PTHR10314 25 36 2.6E-130 T 23-04-2016 BUMPUSDA_RS00970 326a88b95482f5c8b78db0b18829713d 428 PANTHER PTHR10314:SF1 53 426 2.6E-130 T 23-04-2016 BUMPUSDA_RS00970 326a88b95482f5c8b78db0b18829713d 428 PANTHER PTHR10314:SF1 25 36 2.6E-130 T 23-04-2016 BUMPUSDA_RS00970 326a88b95482f5c8b78db0b18829713d 428 SUPERFAMILY SSF53686 1 427 8.12E-128 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme BUMPUSDA_RS00970 326a88b95482f5c8b78db0b18829713d 428 Gene3D G3DSA:3.40.50.1100 197 322 6.4E-51 T 23-04-2016 BUMPUSDA_RS00970 326a88b95482f5c8b78db0b18829713d 428 Gene3D G3DSA:3.40.50.1100 327 403 2.1E-14 T 23-04-2016 BUMPUSDA_RS00970 326a88b95482f5c8b78db0b18829713d 428 Gene3D G3DSA:3.90.1380.10 1 84 9.1E-17 T 23-04-2016 IPR029144 Threonine synthase, N-terminal BUMPUSDA_RS00970 326a88b95482f5c8b78db0b18829713d 428 Pfam PF14821 Threonine synthase N terminus 8 80 3.1E-10 T 23-04-2016 IPR029144 Threonine synthase, N-terminal BUMPUSDA_RS00970 326a88b95482f5c8b78db0b18829713d 428 Gene3D G3DSA:3.40.50.1100 107 196 7.0E-14 T 23-04-2016 BUMPUSDA_RS00970 326a88b95482f5c8b78db0b18829713d 428 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 98 112 - T 23-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 BUMPUSDA_RS00860 497a4e96b12ab7bb2e26824a72dbe2eb 295 Pfam PF00288 GHMP kinases N terminal domain 97 133 1.4E-6 T 23-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 BUMPUSDA_RS00860 497a4e96b12ab7bb2e26824a72dbe2eb 295 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 7 287 3.3E-75 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 BUMPUSDA_RS00860 497a4e96b12ab7bb2e26824a72dbe2eb 295 PANTHER PTHR20861:SF2 8 286 2.4E-69 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 BUMPUSDA_RS00860 497a4e96b12ab7bb2e26824a72dbe2eb 295 PIRSF PIRSF010376 5 288 2.4E-76 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 BUMPUSDA_RS00860 497a4e96b12ab7bb2e26824a72dbe2eb 295 PANTHER PTHR20861 8 286 2.4E-69 T 23-04-2016 BUMPUSDA_RS00860 497a4e96b12ab7bb2e26824a72dbe2eb 295 SUPERFAMILY SSF54211 7 168 2.58E-39 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold BUMPUSDA_RS00860 497a4e96b12ab7bb2e26824a72dbe2eb 295 SUPERFAMILY SSF55060 173 287 1.73E-29 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain BUMPUSDA_RS00860 497a4e96b12ab7bb2e26824a72dbe2eb 295 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 7 280 28.709 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 BUMPUSDA_RS00860 497a4e96b12ab7bb2e26824a72dbe2eb 295 Gene3D G3DSA:3.30.70.890 172 287 6.4E-34 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain BUMPUSDA_RS00860 497a4e96b12ab7bb2e26824a72dbe2eb 295 Gene3D G3DSA:3.30.230.10 8 168 2.1E-45 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BUMPUSDA_RS01905 53bfa62018bc54210f3f0eaeebf6d92d 310 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 31 178 6.8E-49 T 23-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 BUMPUSDA_RS01905 53bfa62018bc54210f3f0eaeebf6d92d 310 PANTHER PTHR13767:SF2 5 307 6.9E-95 T 23-04-2016 BUMPUSDA_RS01905 53bfa62018bc54210f3f0eaeebf6d92d 310 SUPERFAMILY SSF88697 249 309 2.93E-11 T 23-04-2016 IPR015947 PUA-like domain BUMPUSDA_RS01905 53bfa62018bc54210f3f0eaeebf6d92d 310 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 217 2.6E-73 T 23-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 BUMPUSDA_RS01905 53bfa62018bc54210f3f0eaeebf6d92d 310 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 179 246 4.0E-18 T 23-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal BUMPUSDA_RS01905 53bfa62018bc54210f3f0eaeebf6d92d 310 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 9 307 16.563 T 23-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 BUMPUSDA_RS01905 53bfa62018bc54210f3f0eaeebf6d92d 310 SUPERFAMILY SSF55120 9 245 8.43E-75 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 BUMPUSDA_RS01905 53bfa62018bc54210f3f0eaeebf6d92d 310 PANTHER PTHR13767 5 307 6.9E-95 T 23-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 BUMPUSDA_RS01905 53bfa62018bc54210f3f0eaeebf6d92d 310 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 250 307 1.4E-11 T 23-04-2016 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 BUMPUSDA_RS01905 53bfa62018bc54210f3f0eaeebf6d92d 310 Gene3D G3DSA:2.30.130.10 249 308 8.6E-15 T 23-04-2016 IPR015947 PUA-like domain BUMPUSDA_RS03045 34d3781ffee08e3abb969172c8cdd473 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 2.4E-32 T 23-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 BUMPUSDA_RS03045 34d3781ffee08e3abb969172c8cdd473 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 1.1E-221 T 23-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 BUMPUSDA_RS03045 34d3781ffee08e3abb969172c8cdd473 419 SUPERFAMILY SSF68912 1 46 2.67E-12 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 BUMPUSDA_RS03045 34d3781ffee08e3abb969172c8cdd473 419 PANTHER PTHR15184 21 141 2.1E-198 T 23-04-2016 BUMPUSDA_RS03045 34d3781ffee08e3abb969172c8cdd473 419 PANTHER PTHR15184 160 416 2.1E-198 T 23-04-2016 BUMPUSDA_RS03045 34d3781ffee08e3abb969172c8cdd473 419 SMART SM00357 52 118 9.6E-19 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 BUMPUSDA_RS03045 34d3781ffee08e3abb969172c8cdd473 419 Gene3D G3DSA:2.40.50.140 49 117 6.5E-37 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS03045 34d3781ffee08e3abb969172c8cdd473 419 Gene3D G3DSA:3.40.50.300 132 418 3.6E-105 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS03045 34d3781ffee08e3abb969172c8cdd473 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 250.61 T 23-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 BUMPUSDA_RS03045 34d3781ffee08e3abb969172c8cdd473 419 SMART SM00382 170 355 2.2E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain BUMPUSDA_RS03045 34d3781ffee08e3abb969172c8cdd473 419 Gene3D G3DSA:1.10.720.10 1 47 8.2E-22 T 23-04-2016 BUMPUSDA_RS03045 34d3781ffee08e3abb969172c8cdd473 419 SMART SM00959 5 47 1.7E-18 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 BUMPUSDA_RS03045 34d3781ffee08e3abb969172c8cdd473 419 PANTHER PTHR15184:SF34 21 141 2.1E-198 T 23-04-2016 BUMPUSDA_RS03045 34d3781ffee08e3abb969172c8cdd473 419 PANTHER PTHR15184:SF34 160 416 2.1E-198 T 23-04-2016 BUMPUSDA_RS03045 34d3781ffee08e3abb969172c8cdd473 419 Pfam PF07498 Rho termination factor, N-terminal domain 6 47 3.7E-18 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 BUMPUSDA_RS03045 34d3781ffee08e3abb969172c8cdd473 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 2.7E-22 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BUMPUSDA_RS03045 34d3781ffee08e3abb969172c8cdd473 419 SUPERFAMILY SSF50249 48 125 9.0E-30 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS03045 34d3781ffee08e3abb969172c8cdd473 419 SUPERFAMILY SSF52540 90 371 8.84E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01195 65d2ecd26be8482f1e2889c9e9ad604f 800 Pfam PF01103 Surface antigen 448 800 9.2E-73 T 23-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 BUMPUSDA_RS01195 65d2ecd26be8482f1e2889c9e9ad604f 800 Gene3D G3DSA:2.40.160.50 399 797 5.1E-12 T 23-04-2016 BUMPUSDA_RS01195 65d2ecd26be8482f1e2889c9e9ad604f 800 PIRSF PIRSF006076 1 800 2.5E-200 T 23-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 BUMPUSDA_RS01195 65d2ecd26be8482f1e2889c9e9ad604f 800 PANTHER PTHR12815 690 800 6.9E-170 T 23-04-2016 BUMPUSDA_RS01195 65d2ecd26be8482f1e2889c9e9ad604f 800 PANTHER PTHR12815 5 669 6.9E-170 T 23-04-2016 BUMPUSDA_RS01195 65d2ecd26be8482f1e2889c9e9ad604f 800 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 25 800 1.1E-222 T 23-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 BUMPUSDA_RS01195 65d2ecd26be8482f1e2889c9e9ad604f 800 PANTHER PTHR12815:SF11 690 800 6.9E-170 T 23-04-2016 BUMPUSDA_RS01195 65d2ecd26be8482f1e2889c9e9ad604f 800 PANTHER PTHR12815:SF11 5 669 6.9E-170 T 23-04-2016 BUMPUSDA_RS01195 65d2ecd26be8482f1e2889c9e9ad604f 800 Pfam PF07244 Surface antigen variable number repeat 266 342 1.0E-8 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 BUMPUSDA_RS01195 65d2ecd26be8482f1e2889c9e9ad604f 800 Pfam PF07244 Surface antigen variable number repeat 93 172 1.4E-9 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 BUMPUSDA_RS01195 65d2ecd26be8482f1e2889c9e9ad604f 800 Pfam PF07244 Surface antigen variable number repeat 176 263 5.0E-14 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 BUMPUSDA_RS01195 65d2ecd26be8482f1e2889c9e9ad604f 800 Pfam PF07244 Surface antigen variable number repeat 348 421 6.4E-11 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 BUMPUSDA_RS01195 65d2ecd26be8482f1e2889c9e9ad604f 800 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 12 800 21.213 T 23-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 BUMPUSDA_RS00390 ab83657b6abbda02f729864a88377f66 147 PRINTS PR01004 Flagellar FliJ protein signature 87 108 7.0E-5 T 23-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 BUMPUSDA_RS00390 ab83657b6abbda02f729864a88377f66 147 PRINTS PR01004 Flagellar FliJ protein signature 28 44 7.0E-5 T 23-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 BUMPUSDA_RS00390 ab83657b6abbda02f729864a88377f66 147 PRINTS PR01004 Flagellar FliJ protein signature 45 62 7.0E-5 T 23-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 BUMPUSDA_RS00390 ab83657b6abbda02f729864a88377f66 147 PRINTS PR01004 Flagellar FliJ protein signature 64 85 7.0E-5 T 23-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 BUMPUSDA_RS00390 ab83657b6abbda02f729864a88377f66 147 Pfam PF02050 Flagellar FliJ protein 33 142 1.8E-11 T 23-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 BUMPUSDA_RS02545 8b944f03343ef0204ea317a519d84ccb 329 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 228 3.5E-24 T 23-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BUMPUSDA_RS02545 8b944f03343ef0204ea317a519d84ccb 329 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 155 3.0E-21 T 23-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 BUMPUSDA_RS02545 8b944f03343ef0204ea317a519d84ccb 329 SUPERFAMILY SSF55257 8 53 3.34E-30 T 23-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BUMPUSDA_RS02545 8b944f03343ef0204ea317a519d84ccb 329 SUPERFAMILY SSF55257 179 233 3.34E-30 T 23-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BUMPUSDA_RS02545 8b944f03343ef0204ea317a519d84ccb 329 Gene3D G3DSA:3.30.1360.10 10 51 3.5E-10 T 23-04-2016 BUMPUSDA_RS02545 8b944f03343ef0204ea317a519d84ccb 329 PANTHER PTHR32108 1 329 1.5E-154 T 23-04-2016 BUMPUSDA_RS02545 8b944f03343ef0204ea317a519d84ccb 329 SUPERFAMILY SSF47789 251 326 2.09E-25 T 23-04-2016 BUMPUSDA_RS02545 8b944f03343ef0204ea317a519d84ccb 329 PANTHER PTHR32108:SF0 1 329 1.5E-154 T 23-04-2016 BUMPUSDA_RS02545 8b944f03343ef0204ea317a519d84ccb 329 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 316 1.2E-109 T 23-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BUMPUSDA_RS02545 8b944f03343ef0204ea317a519d84ccb 329 Gene3D G3DSA:2.170.120.12 53 177 5.9E-38 T 23-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 BUMPUSDA_RS02545 8b944f03343ef0204ea317a519d84ccb 329 SMART SM00662 23 234 4.0E-101 T 23-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 BUMPUSDA_RS02545 8b944f03343ef0204ea317a519d84ccb 329 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 308 6.2E-24 T 23-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BUMPUSDA_RS02545 8b944f03343ef0204ea317a519d84ccb 329 SUPERFAMILY SSF56553 53 178 8.2E-42 T 23-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 BUMPUSDA_RS02545 8b944f03343ef0204ea317a519d84ccb 329 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 317 34.301 T 23-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BUMPUSDA_RS02545 8b944f03343ef0204ea317a519d84ccb 329 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 256 329 2.0E-35 T 23-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BUMPUSDA_RS02545 8b944f03343ef0204ea317a519d84ccb 329 Gene3D G3DSA:1.10.150.20 244 326 3.9E-37 T 23-04-2016 BUMPUSDA_RS01220 43bb884954f8cf3ced42963c324c9008 694 PANTHER PTHR30161 2 694 0.0 T 23-04-2016 BUMPUSDA_RS01220 43bb884954f8cf3ced42963c324c9008 694 PIRSF PIRSF005419 9 693 1.3E-231 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BUMPUSDA_RS01220 43bb884954f8cf3ced42963c324c9008 694 Pfam PF00771 FHIPEP family 31 682 2.1E-252 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BUMPUSDA_RS01220 43bb884954f8cf3ced42963c324c9008 694 PANTHER PTHR30161:SF1 2 694 0.0 T 23-04-2016 BUMPUSDA_RS01220 43bb884954f8cf3ced42963c324c9008 694 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 23-04-2016 IPR025505 FHIPEP conserved site BUMPUSDA_RS01220 43bb884954f8cf3ced42963c324c9008 694 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 3.1E-54 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BUMPUSDA_RS01220 43bb884954f8cf3ced42963c324c9008 694 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 3.1E-54 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BUMPUSDA_RS01220 43bb884954f8cf3ced42963c324c9008 694 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 3.1E-54 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BUMPUSDA_RS01220 43bb884954f8cf3ced42963c324c9008 694 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 3.1E-54 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BUMPUSDA_RS01220 43bb884954f8cf3ced42963c324c9008 694 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 3.1E-54 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BUMPUSDA_RS01220 43bb884954f8cf3ced42963c324c9008 694 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 3.1E-54 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BUMPUSDA_RS01220 43bb884954f8cf3ced42963c324c9008 694 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 692 5.8E-259 T 23-04-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 BUMPUSDA_RS00285 183ea7bfc827d7fe06bc285e7b3872a3 579 Gene3D G3DSA:3.90.980.10 114 236 5.2E-33 T 23-04-2016 IPR013264 DNA primase, catalytic core, N-terminal BUMPUSDA_RS00285 183ea7bfc827d7fe06bc285e7b3872a3 579 TIGRFAM TIGR01391 dnaG: DNA primase 5 414 1.3E-139 T 23-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 BUMPUSDA_RS00285 183ea7bfc827d7fe06bc285e7b3872a3 579 Hamap MF_00974 DNA primase [dnaG]. 4 573 27.769 T 23-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 BUMPUSDA_RS00285 183ea7bfc827d7fe06bc285e7b3872a3 579 PANTHER PTHR30313 3 575 1.6E-133 T 23-04-2016 BUMPUSDA_RS00285 183ea7bfc827d7fe06bc285e7b3872a3 579 Gene3D G3DSA:3.90.580.10 3 101 1.1E-34 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 BUMPUSDA_RS00285 183ea7bfc827d7fe06bc285e7b3872a3 579 PIRSF PIRSF002811 2 579 4.0E-133 T 23-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 BUMPUSDA_RS00285 183ea7bfc827d7fe06bc285e7b3872a3 579 SMART SM00400 36 90 2.6E-30 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 BUMPUSDA_RS00285 183ea7bfc827d7fe06bc285e7b3872a3 579 SMART SM00493 255 326 9.5E-17 T 23-04-2016 IPR006171 Toprim domain BUMPUSDA_RS00285 183ea7bfc827d7fe06bc285e7b3872a3 579 Pfam PF08275 DNA primase catalytic core, N-terminal domain 135 247 8.7E-34 T 23-04-2016 IPR013264 DNA primase, catalytic core, N-terminal BUMPUSDA_RS00285 183ea7bfc827d7fe06bc285e7b3872a3 579 SMART SM00766 447 572 7.3E-42 T 23-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 BUMPUSDA_RS00285 183ea7bfc827d7fe06bc285e7b3872a3 579 Gene3D G3DSA:1.20.50.20 364 422 1.7E-16 T 23-04-2016 BUMPUSDA_RS00285 183ea7bfc827d7fe06bc285e7b3872a3 579 SUPERFAMILY SSF57783 5 100 8.84E-32 T 23-04-2016 BUMPUSDA_RS00285 183ea7bfc827d7fe06bc285e7b3872a3 579 Pfam PF08278 DNA primase DnaG DnaB-binding 448 570 3.9E-27 T 23-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 BUMPUSDA_RS00285 183ea7bfc827d7fe06bc285e7b3872a3 579 SUPERFAMILY SSF56731 114 423 4.71E-96 T 23-04-2016 BUMPUSDA_RS00285 183ea7bfc827d7fe06bc285e7b3872a3 579 Pfam PF10410 DnaB-helicase binding domain of primase 367 420 5.7E-7 T 23-04-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 BUMPUSDA_RS00285 183ea7bfc827d7fe06bc285e7b3872a3 579 Gene3D G3DSA:1.10.860.10 434 577 4.1E-43 T 23-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal BUMPUSDA_RS00285 183ea7bfc827d7fe06bc285e7b3872a3 579 Pfam PF13155 Toprim-like 259 344 3.0E-14 T 23-04-2016 BUMPUSDA_RS00285 183ea7bfc827d7fe06bc285e7b3872a3 579 SUPERFAMILY SSF117023 444 575 1.44E-38 T 23-04-2016 BUMPUSDA_RS00285 183ea7bfc827d7fe06bc285e7b3872a3 579 Pfam PF01807 CHC2 zinc finger 6 100 3.9E-35 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 BUMPUSDA_RS00285 183ea7bfc827d7fe06bc285e7b3872a3 579 Gene3D G3DSA:3.40.1360.10 237 361 3.8E-41 T 23-04-2016 BUMPUSDA_RS01975 32756f8047ce2345dd8ab660875178a7 130 PANTHER PTHR21569 1 130 2.7E-67 T 23-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS01975 32756f8047ce2345dd8ab660875178a7 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 23-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS01975 32756f8047ce2345dd8ab660875178a7 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 1.3E-47 T 23-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS01975 32756f8047ce2345dd8ab660875178a7 130 Gene3D G3DSA:3.30.230.10 6 130 2.0E-50 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BUMPUSDA_RS01975 32756f8047ce2345dd8ab660875178a7 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 32.488 T 23-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid BUMPUSDA_RS01975 32756f8047ce2345dd8ab660875178a7 130 SUPERFAMILY SSF54211 6 130 1.33E-48 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold BUMPUSDA_RS00485 fe58182e13de8b25caaa2b2832e17ede 354 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 23-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 BUMPUSDA_RS00485 fe58182e13de8b25caaa2b2832e17ede 354 PIRSF PIRSF001456 3 353 7.7E-140 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 BUMPUSDA_RS00485 fe58182e13de8b25caaa2b2832e17ede 354 TIGRFAM TIGR00033 aroC: chorismate synthase 10 348 4.0E-139 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 BUMPUSDA_RS00485 fe58182e13de8b25caaa2b2832e17ede 354 PANTHER PTHR21085 2 352 7.6E-204 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 BUMPUSDA_RS00485 fe58182e13de8b25caaa2b2832e17ede 354 Pfam PF01264 Chorismate synthase 10 345 4.6E-140 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 BUMPUSDA_RS00485 fe58182e13de8b25caaa2b2832e17ede 354 SUPERFAMILY SSF103263 4 351 8.24E-144 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 BUMPUSDA_RS00485 fe58182e13de8b25caaa2b2832e17ede 354 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 23-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 BUMPUSDA_RS00485 fe58182e13de8b25caaa2b2832e17ede 354 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 36.834 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 BUMPUSDA_RS00485 fe58182e13de8b25caaa2b2832e17ede 354 Gene3D G3DSA:3.60.150.10 10 352 1.9E-154 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 BUMPUSDA_RS00485 fe58182e13de8b25caaa2b2832e17ede 354 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 23-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 BUMPUSDA_RS02195 dfed3a0c04fc8d80e39295623a1d10d4 291 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 172 269 5.8E-27 T 23-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 BUMPUSDA_RS02195 dfed3a0c04fc8d80e39295623a1d10d4 291 PANTHER PTHR10133:SF27 1 284 3.2E-90 T 23-04-2016 BUMPUSDA_RS02195 dfed3a0c04fc8d80e39295623a1d10d4 291 SMART SM00279 174 209 3.7E-14 T 23-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 BUMPUSDA_RS02195 dfed3a0c04fc8d80e39295623a1d10d4 291 SUPERFAMILY SSF88723 7 171 2.7E-46 T 23-04-2016 IPR029060 PIN domain-like BUMPUSDA_RS02195 dfed3a0c04fc8d80e39295623a1d10d4 291 PANTHER PTHR10133 1 284 3.2E-90 T 23-04-2016 BUMPUSDA_RS02195 dfed3a0c04fc8d80e39295623a1d10d4 291 SUPERFAMILY SSF47807 172 286 1.33E-25 T 23-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 BUMPUSDA_RS02195 dfed3a0c04fc8d80e39295623a1d10d4 291 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 171 4.4E-46 T 23-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 BUMPUSDA_RS02195 dfed3a0c04fc8d80e39295623a1d10d4 291 Gene3D G3DSA:3.40.50.1010 8 186 4.1E-60 T 23-04-2016 IPR029060 PIN domain-like BUMPUSDA_RS02195 dfed3a0c04fc8d80e39295623a1d10d4 291 Gene3D G3DSA:1.10.150.20 187 254 5.9E-25 T 23-04-2016 BUMPUSDA_RS02195 dfed3a0c04fc8d80e39295623a1d10d4 291 SMART SM00475 5 269 6.0E-83 T 23-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 BUMPUSDA_RS02575 b0d5ba159449e1cc796b0e34a38567cd 144 PANTHER PTHR12934 1 143 3.0E-53 T 23-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 BUMPUSDA_RS02575 b0d5ba159449e1cc796b0e34a38567cd 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 3 142 1.9E-47 T 23-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 BUMPUSDA_RS02575 b0d5ba159449e1cc796b0e34a38567cd 144 Gene3D G3DSA:3.100.10.10 32 143 3.0E-21 T 23-04-2016 BUMPUSDA_RS02575 b0d5ba159449e1cc796b0e34a38567cd 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 23-04-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02575 b0d5ba159449e1cc796b0e34a38567cd 144 SUPERFAMILY SSF52080 4 142 3.66E-43 T 23-04-2016 IPR021131 Ribosomal protein L18e/L15P BUMPUSDA_RS02575 b0d5ba159449e1cc796b0e34a38567cd 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 143 18.296 T 23-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 BUMPUSDA_RS02575 b0d5ba159449e1cc796b0e34a38567cd 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 2.4E-28 T 23-04-2016 IPR021131 Ribosomal protein L18e/L15P BUMPUSDA_RS00520 4f09dd34c5eda2b87f271dc8bb202e47 246 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 1.7E-72 T 23-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 BUMPUSDA_RS00520 4f09dd34c5eda2b87f271dc8bb202e47 246 Pfam PF00977 Histidine biosynthesis protein 1 233 1.5E-68 T 23-04-2016 IPR006062 Histidine biosynthesis GO:0000105 BUMPUSDA_RS00520 4f09dd34c5eda2b87f271dc8bb202e47 246 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 32.525 T 23-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 BUMPUSDA_RS00520 4f09dd34c5eda2b87f271dc8bb202e47 246 PANTHER PTHR21235:SF15 1 244 4.3E-86 T 23-04-2016 BUMPUSDA_RS00520 4f09dd34c5eda2b87f271dc8bb202e47 246 Gene3D G3DSA:3.20.20.70 1 243 1.7E-68 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 BUMPUSDA_RS00520 4f09dd34c5eda2b87f271dc8bb202e47 246 SUPERFAMILY SSF51366 1 243 6.73E-59 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 BUMPUSDA_RS00520 4f09dd34c5eda2b87f271dc8bb202e47 246 PANTHER PTHR21235 1 244 4.3E-86 T 23-04-2016 BUMPUSDA_RS02275 16307a470c0703a57005fd89df3c90b1 78 SUPERFAMILY SSF64307 5 77 9.16E-21 T 23-04-2016 IPR001455 TusA-like domain BUMPUSDA_RS02275 16307a470c0703a57005fd89df3c90b1 78 PANTHER PTHR33279:SF5 3 77 1.6E-31 T 23-04-2016 BUMPUSDA_RS02275 16307a470c0703a57005fd89df3c90b1 78 PANTHER PTHR33279 3 77 1.6E-31 T 23-04-2016 BUMPUSDA_RS02275 16307a470c0703a57005fd89df3c90b1 78 Pfam PF01206 Sulfurtransferase TusA 9 76 3.2E-20 T 23-04-2016 IPR001455 TusA-like domain BUMPUSDA_RS02275 16307a470c0703a57005fd89df3c90b1 78 Gene3D G3DSA:3.30.110.40 4 77 1.0E-22 T 23-04-2016 IPR001455 TusA-like domain BUMPUSDA_RS02275 16307a470c0703a57005fd89df3c90b1 78 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 9 33 - T 23-04-2016 IPR001455 TusA-like domain BUMPUSDA_RS02275 16307a470c0703a57005fd89df3c90b1 78 Hamap MF_00413 Sulfurtransferase TusA [tusA]. 1 78 25.668 T 23-04-2016 IPR022931 Sulphurtransferase TusA GO:0016783 BUMPUSDA_RS03065 f654776237aed952439d08685a2e00cd 617 PANTHER PTHR21000 1 371 0.0 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 BUMPUSDA_RS03065 f654776237aed952439d08685a2e00cd 617 PANTHER PTHR21000 406 614 0.0 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 BUMPUSDA_RS03065 f654776237aed952439d08685a2e00cd 617 Pfam PF00920 Dehydratase family 34 607 1.9E-205 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 BUMPUSDA_RS03065 f654776237aed952439d08685a2e00cd 617 PANTHER PTHR21000:SF11 1 371 0.0 T 23-04-2016 BUMPUSDA_RS03065 f654776237aed952439d08685a2e00cd 617 PANTHER PTHR21000:SF11 406 614 0.0 T 23-04-2016 BUMPUSDA_RS03065 f654776237aed952439d08685a2e00cd 617 SUPERFAMILY SSF143975 3 420 9.29E-129 T 23-04-2016 BUMPUSDA_RS03065 f654776237aed952439d08685a2e00cd 617 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 23-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 BUMPUSDA_RS03065 f654776237aed952439d08685a2e00cd 617 SUPERFAMILY SSF52016 421 611 2.59E-56 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel BUMPUSDA_RS03065 f654776237aed952439d08685a2e00cd 617 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 610 43.386 T 23-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 BUMPUSDA_RS03065 f654776237aed952439d08685a2e00cd 617 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 23-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 BUMPUSDA_RS03065 f654776237aed952439d08685a2e00cd 617 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 610 1.3E-241 T 23-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 BUMPUSDA_RS02080 0a383a68eb81ac6cf622e6f3fa278024 196 Gene3D G3DSA:3.40.50.10420 9 193 2.2E-45 T 23-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain BUMPUSDA_RS02080 0a383a68eb81ac6cf622e6f3fa278024 196 PANTHER PTHR23407:SF1 1 196 4.6E-47 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase BUMPUSDA_RS02080 0a383a68eb81ac6cf622e6f3fa278024 196 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 9 190 7.7E-51 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase BUMPUSDA_RS02080 0a383a68eb81ac6cf622e6f3fa278024 196 PANTHER PTHR23407 1 196 4.6E-47 T 23-04-2016 BUMPUSDA_RS02080 0a383a68eb81ac6cf622e6f3fa278024 196 PIRSF PIRSF006806 4 193 1.8E-37 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase BUMPUSDA_RS02080 0a383a68eb81ac6cf622e6f3fa278024 196 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 10 190 1.6E-39 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase BUMPUSDA_RS02080 0a383a68eb81ac6cf622e6f3fa278024 196 SUPERFAMILY SSF100950 8 196 1.67E-50 T 23-04-2016 BUMPUSDA_RS02925 aaffc6972cdf92e4fee962b39d8fb2de 182 Pfam PF00929 Exonuclease 9 168 1.3E-31 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III BUMPUSDA_RS02925 aaffc6972cdf92e4fee962b39d8fb2de 182 SUPERFAMILY SSF53098 2 180 1.65E-44 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 BUMPUSDA_RS02925 aaffc6972cdf92e4fee962b39d8fb2de 182 Gene3D G3DSA:3.30.420.10 4 179 4.9E-62 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 BUMPUSDA_RS02925 aaffc6972cdf92e4fee962b39d8fb2de 182 PANTHER PTHR11046:SF1 4 181 9.5E-94 T 23-04-2016 BUMPUSDA_RS02925 aaffc6972cdf92e4fee962b39d8fb2de 182 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 40.033 T 23-04-2016 IPR022894 Oligoribonuclease GO:0016788 BUMPUSDA_RS02925 aaffc6972cdf92e4fee962b39d8fb2de 182 PANTHER PTHR11046 4 181 9.5E-94 T 23-04-2016 BUMPUSDA_RS02925 aaffc6972cdf92e4fee962b39d8fb2de 182 SMART SM00479 7 180 1.8E-12 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III BUMPUSDA_RS02175 4444c86b192049e9e4dd7e17b566773e 569 PRINTS PR00397 Sirohaem Fe-binding site signature 428 446 5.71E-8 T 23-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 BUMPUSDA_RS02175 4444c86b192049e9e4dd7e17b566773e 569 PRINTS PR00397 Sirohaem Fe-binding site signature 476 494 5.71E-8 T 23-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 BUMPUSDA_RS02175 4444c86b192049e9e4dd7e17b566773e 569 SUPERFAMILY SSF56014 149 343 7.33E-53 T 23-04-2016 BUMPUSDA_RS02175 4444c86b192049e9e4dd7e17b566773e 569 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 476 492 - T 23-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 BUMPUSDA_RS02175 4444c86b192049e9e4dd7e17b566773e 569 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 18 557 3.8E-286 T 23-04-2016 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 BUMPUSDA_RS02175 4444c86b192049e9e4dd7e17b566773e 569 PANTHER PTHR11493:SF47 12 558 1.4E-229 T 23-04-2016 BUMPUSDA_RS02175 4444c86b192049e9e4dd7e17b566773e 569 Gene3D G3DSA:3.90.480.10 341 421 2.1E-53 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 BUMPUSDA_RS02175 4444c86b192049e9e4dd7e17b566773e 569 Gene3D G3DSA:3.90.480.10 73 145 2.1E-53 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 BUMPUSDA_RS02175 4444c86b192049e9e4dd7e17b566773e 569 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 353 414 7.5E-12 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 BUMPUSDA_RS02175 4444c86b192049e9e4dd7e17b566773e 569 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 79 138 4.3E-12 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 BUMPUSDA_RS02175 4444c86b192049e9e4dd7e17b566773e 569 SUPERFAMILY SSF56014 426 558 1.83E-30 T 23-04-2016 BUMPUSDA_RS02175 4444c86b192049e9e4dd7e17b566773e 569 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 9 569 54.251 T 23-04-2016 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 BUMPUSDA_RS02175 4444c86b192049e9e4dd7e17b566773e 569 SUPERFAMILY SSF55124 345 420 1.38E-18 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 BUMPUSDA_RS02175 4444c86b192049e9e4dd7e17b566773e 569 PANTHER PTHR11493 12 558 1.4E-229 T 23-04-2016 BUMPUSDA_RS02175 4444c86b192049e9e4dd7e17b566773e 569 SUPERFAMILY SSF55124 10 143 4.58E-25 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 BUMPUSDA_RS02175 4444c86b192049e9e4dd7e17b566773e 569 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 173 329 4.2E-42 T 23-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 BUMPUSDA_RS02175 4444c86b192049e9e4dd7e17b566773e 569 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 432 556 0.0048 T 23-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 BUMPUSDA_RS02175 4444c86b192049e9e4dd7e17b566773e 569 Gene3D G3DSA:3.30.413.10 149 338 2.7E-62 T 23-04-2016 BUMPUSDA_RS02175 4444c86b192049e9e4dd7e17b566773e 569 Gene3D G3DSA:3.30.413.10 428 561 7.8E-28 T 23-04-2016 BUMPUSDA_RS03105 1b5b028806fa0b1fe4b3526094df83a2 190 PANTHER PTHR38035 42 190 9.6E-22 T 23-04-2016 BUMPUSDA_RS03105 1b5b028806fa0b1fe4b3526094df83a2 190 Pfam PF09976 Tetratricopeptide repeat-like domain 13 189 7.3E-25 T 23-04-2016 IPR018704 Tetratricopeptide repeat-like domain BUMPUSDA_RS02640 4a882b3d5bed6e29aced8cbc72a27002 233 Gene3D G3DSA:3.30.1140.32 108 207 1.4E-46 T 23-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02640 4a882b3d5bed6e29aced8cbc72a27002 233 PANTHER PTHR11760 2 233 6.3E-139 T 23-04-2016 BUMPUSDA_RS02640 4a882b3d5bed6e29aced8cbc72a27002 233 PANTHER PTHR11760:SF19 2 233 6.3E-139 T 23-04-2016 BUMPUSDA_RS02640 4a882b3d5bed6e29aced8cbc72a27002 233 SMART SM00322 60 125 8.3E-6 T 23-04-2016 IPR004087 K Homology domain GO:0003676 BUMPUSDA_RS02640 4a882b3d5bed6e29aced8cbc72a27002 233 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 9.0E-41 T 23-04-2016 BUMPUSDA_RS02640 4a882b3d5bed6e29aced8cbc72a27002 233 Pfam PF07650 KH domain 38 111 4.7E-18 T 23-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 BUMPUSDA_RS02640 4a882b3d5bed6e29aced8cbc72a27002 233 SUPERFAMILY SSF54821 108 206 1.96E-39 T 23-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02640 4a882b3d5bed6e29aced8cbc72a27002 233 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.0E-97 T 23-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 BUMPUSDA_RS02640 4a882b3d5bed6e29aced8cbc72a27002 233 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 23-04-2016 IPR018280 Ribosomal protein S3, conserved site BUMPUSDA_RS02640 4a882b3d5bed6e29aced8cbc72a27002 233 Gene3D G3DSA:3.30.300.20 17 107 2.3E-33 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta BUMPUSDA_RS02640 4a882b3d5bed6e29aced8cbc72a27002 233 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.321 T 23-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 BUMPUSDA_RS02640 4a882b3d5bed6e29aced8cbc72a27002 233 SUPERFAMILY SSF54814 2 106 7.1E-39 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 BUMPUSDA_RS01100 04b7e0666758ad2fc2cde84abaef9f6d 439 SUPERFAMILY SSF53623 99 298 5.63E-44 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 BUMPUSDA_RS01100 04b7e0666758ad2fc2cde84abaef9f6d 439 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 438 30.755 T 23-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 BUMPUSDA_RS01100 04b7e0666758ad2fc2cde84abaef9f6d 439 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 9 436 1.1E-110 T 23-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 BUMPUSDA_RS01100 04b7e0666758ad2fc2cde84abaef9f6d 439 PANTHER PTHR23135:SF2 1 438 1.0E-124 T 23-04-2016 BUMPUSDA_RS01100 04b7e0666758ad2fc2cde84abaef9f6d 439 Gene3D G3DSA:3.40.1190.10 95 299 3.0E-46 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 BUMPUSDA_RS01100 04b7e0666758ad2fc2cde84abaef9f6d 439 Gene3D G3DSA:3.90.190.20 301 434 2.6E-38 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 BUMPUSDA_RS01100 04b7e0666758ad2fc2cde84abaef9f6d 439 Pfam PF02875 Mur ligase family, glutamate ligase domain 302 374 8.0E-6 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 BUMPUSDA_RS01100 04b7e0666758ad2fc2cde84abaef9f6d 439 SUPERFAMILY SSF53244 301 438 6.41E-41 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 BUMPUSDA_RS01100 04b7e0666758ad2fc2cde84abaef9f6d 439 PANTHER PTHR23135 1 438 1.0E-124 T 23-04-2016 BUMPUSDA_RS01100 04b7e0666758ad2fc2cde84abaef9f6d 439 SUPERFAMILY SSF51984 4 95 4.45E-18 T 23-04-2016 BUMPUSDA_RS01100 04b7e0666758ad2fc2cde84abaef9f6d 439 Gene3D G3DSA:3.40.50.720 6 93 2.7E-19 T 23-04-2016 IPR016040 NAD(P)-binding domain BUMPUSDA_RS01100 04b7e0666758ad2fc2cde84abaef9f6d 439 Pfam PF08245 Mur ligase middle domain 111 280 7.9E-21 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 BUMPUSDA_RS00540 3153c6c4e85ee6710c794f3647c2ff28 193 PANTHER PTHR11241:SF1 77 192 3.8E-52 T 23-04-2016 BUMPUSDA_RS00540 3153c6c4e85ee6710c794f3647c2ff28 193 PANTHER PTHR11241:SF1 1 58 3.8E-52 T 23-04-2016 BUMPUSDA_RS00540 3153c6c4e85ee6710c794f3647c2ff28 193 Gene3D G3DSA:2.70.40.10 1 192 1.5E-50 T 23-04-2016 IPR029054 dUTPase-like BUMPUSDA_RS00540 3153c6c4e85ee6710c794f3647c2ff28 193 SUPERFAMILY SSF51283 1 192 4.58E-51 T 23-04-2016 IPR029054 dUTPase-like BUMPUSDA_RS00540 3153c6c4e85ee6710c794f3647c2ff28 193 PANTHER PTHR11241 77 192 3.8E-52 T 23-04-2016 BUMPUSDA_RS00540 3153c6c4e85ee6710c794f3647c2ff28 193 PANTHER PTHR11241 1 58 3.8E-52 T 23-04-2016 BUMPUSDA_RS00540 3153c6c4e85ee6710c794f3647c2ff28 193 Pfam PF00692 dUTPase 77 185 9.7E-10 T 23-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 BUMPUSDA_RS00540 3153c6c4e85ee6710c794f3647c2ff28 193 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 190 31.604 T 23-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 BUMPUSDA_RS00540 3153c6c4e85ee6710c794f3647c2ff28 193 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 190 9.3E-65 T 23-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 BUMPUSDA_RS00670 34f71a1791b5a11ba8a53649f132854a 112 PANTHER PTHR33909 1 110 1.3E-29 T 23-04-2016 BUMPUSDA_RS00670 34f71a1791b5a11ba8a53649f132854a 112 PANTHER PTHR33909:SF1 1 110 1.3E-29 T 23-04-2016 BUMPUSDA_RS00670 34f71a1791b5a11ba8a53649f132854a 112 SMART SM01323 19 102 7.5E-35 T 23-04-2016 IPR003849 Preprotein translocase YajC BUMPUSDA_RS00670 34f71a1791b5a11ba8a53649f132854a 112 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 21 102 1.2E-28 T 23-04-2016 IPR003849 Preprotein translocase YajC BUMPUSDA_RS00670 34f71a1791b5a11ba8a53649f132854a 112 PRINTS PR01853 Bacterial YajC preprotein translocase signature 41 59 2.6E-14 T 23-04-2016 IPR003849 Preprotein translocase YajC BUMPUSDA_RS00670 34f71a1791b5a11ba8a53649f132854a 112 PRINTS PR01853 Bacterial YajC preprotein translocase signature 21 41 2.6E-14 T 23-04-2016 IPR003849 Preprotein translocase YajC BUMPUSDA_RS00670 34f71a1791b5a11ba8a53649f132854a 112 Pfam PF02699 Preprotein translocase subunit 23 99 3.6E-26 T 23-04-2016 IPR003849 Preprotein translocase YajC BUMPUSDA_RS01305 7e242fc858cfd049d1779ccd68535a3c 226 Pfam PF14622 Ribonuclease-III-like 20 142 3.2E-34 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 BUMPUSDA_RS01305 7e242fc858cfd049d1779ccd68535a3c 226 SMART SM00358 156 224 6.5E-18 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain BUMPUSDA_RS01305 7e242fc858cfd049d1779ccd68535a3c 226 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 10 222 1.4E-73 T 23-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 BUMPUSDA_RS01305 7e242fc858cfd049d1779ccd68535a3c 226 PANTHER PTHR11207 7 223 4.2E-95 T 23-04-2016 BUMPUSDA_RS01305 7e242fc858cfd049d1779ccd68535a3c 226 Pfam PF00035 Double-stranded RNA binding motif 156 223 1.1E-12 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain BUMPUSDA_RS01305 7e242fc858cfd049d1779ccd68535a3c 226 SUPERFAMILY SSF69065 6 159 1.1E-49 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 BUMPUSDA_RS01305 7e242fc858cfd049d1779ccd68535a3c 226 SMART SM00535 21 149 5.5E-56 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 BUMPUSDA_RS01305 7e242fc858cfd049d1779ccd68535a3c 226 SUPERFAMILY SSF54768 109 225 1.07E-25 T 23-04-2016 BUMPUSDA_RS01305 7e242fc858cfd049d1779ccd68535a3c 226 ProSitePatterns PS00517 Ribonuclease III family signature. 38 46 - T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 BUMPUSDA_RS01305 7e242fc858cfd049d1779ccd68535a3c 226 Hamap MF_00104 Ribonuclease 3 [rnc]. 9 220 29.592 T 23-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 BUMPUSDA_RS01305 7e242fc858cfd049d1779ccd68535a3c 226 Gene3D G3DSA:1.10.1520.10 7 148 2.5E-47 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 BUMPUSDA_RS01305 7e242fc858cfd049d1779ccd68535a3c 226 Gene3D G3DSA:3.30.160.20 153 224 1.3E-24 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain BUMPUSDA_RS01345 8676e1641965eefc3f7c159b104c0f4c 259 Gene3D G3DSA:3.40.50.720 6 198 3.8E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain BUMPUSDA_RS01345 8676e1641965eefc3f7c159b104c0f4c 259 PANTHER PTHR24322 159 191 5.7E-51 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR BUMPUSDA_RS01345 8676e1641965eefc3f7c159b104c0f4c 259 PANTHER PTHR24322 11 143 5.7E-51 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR BUMPUSDA_RS01345 8676e1641965eefc3f7c159b104c0f4c 259 PANTHER PTHR24322:SF317 159 191 5.7E-51 T 23-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 BUMPUSDA_RS01345 8676e1641965eefc3f7c159b104c0f4c 259 PANTHER PTHR24322:SF317 11 143 5.7E-51 T 23-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 BUMPUSDA_RS01345 8676e1641965eefc3f7c159b104c0f4c 259 PIRSF PIRSF000094 1 259 1.4E-108 T 23-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 BUMPUSDA_RS01345 8676e1641965eefc3f7c159b104c0f4c 259 SUPERFAMILY SSF51735 5 253 8.57E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain BUMPUSDA_RS01345 8676e1641965eefc3f7c159b104c0f4c 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 252 1.9E-68 T 23-04-2016 BUMPUSDA_RS00470 59e0d19b5a4d4262cdcbdefce9d7b1be 665 SMART SM00861 355 525 7.3E-65 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain BUMPUSDA_RS00470 59e0d19b5a4d4262cdcbdefce9d7b1be 665 Gene3D G3DSA:3.40.50.920 539 664 1.2E-39 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 BUMPUSDA_RS00470 59e0d19b5a4d4262cdcbdefce9d7b1be 665 SUPERFAMILY SSF52518 5 320 1.82E-115 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold BUMPUSDA_RS00470 59e0d19b5a4d4262cdcbdefce9d7b1be 665 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 3.8E-157 T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 BUMPUSDA_RS00470 59e0d19b5a4d4262cdcbdefce9d7b1be 665 Gene3D G3DSA:3.40.50.970 328 533 6.9E-78 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold BUMPUSDA_RS00470 59e0d19b5a4d4262cdcbdefce9d7b1be 665 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 23-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 BUMPUSDA_RS00470 59e0d19b5a4d4262cdcbdefce9d7b1be 665 PANTHER PTHR11624 334 663 0.0 T 23-04-2016 IPR033247 Transketolase family BUMPUSDA_RS00470 59e0d19b5a4d4262cdcbdefce9d7b1be 665 PANTHER PTHR11624 1 310 0.0 T 23-04-2016 IPR033247 Transketolase family BUMPUSDA_RS00470 59e0d19b5a4d4262cdcbdefce9d7b1be 665 PANTHER PTHR11624:SF85 334 663 0.0 T 23-04-2016 BUMPUSDA_RS00470 59e0d19b5a4d4262cdcbdefce9d7b1be 665 PANTHER PTHR11624:SF85 1 310 0.0 T 23-04-2016 BUMPUSDA_RS00470 59e0d19b5a4d4262cdcbdefce9d7b1be 665 TIGRFAM TIGR00232 tktlase_bact: transketolase 6 662 2.6E-297 T 23-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 BUMPUSDA_RS00470 59e0d19b5a4d4262cdcbdefce9d7b1be 665 Gene3D G3DSA:3.40.50.970 5 321 1.2E-125 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold BUMPUSDA_RS00470 59e0d19b5a4d4262cdcbdefce9d7b1be 665 SUPERFAMILY SSF52922 532 664 3.77E-35 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 BUMPUSDA_RS00470 59e0d19b5a4d4262cdcbdefce9d7b1be 665 SUPERFAMILY SSF52518 335 525 1.09E-66 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold BUMPUSDA_RS00470 59e0d19b5a4d4262cdcbdefce9d7b1be 665 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 BUMPUSDA_RS00470 59e0d19b5a4d4262cdcbdefce9d7b1be 665 Pfam PF02780 Transketolase, C-terminal domain 549 655 4.6E-11 T 23-04-2016 IPR033248 Transketolase, C-terminal domain BUMPUSDA_RS00470 59e0d19b5a4d4262cdcbdefce9d7b1be 665 Pfam PF02779 Transketolase, pyrimidine binding domain 354 523 5.5E-44 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain BUMPUSDA_RS00855 33698cfba5c484f09d092ef48217d206 312 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 1 118 2.7E-49 T 23-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 BUMPUSDA_RS00855 33698cfba5c484f09d092ef48217d206 312 PANTHER PTHR10210:SF41 1 312 1.1E-183 T 23-04-2016 BUMPUSDA_RS00855 33698cfba5c484f09d092ef48217d206 312 SUPERFAMILY SSF53271 66 303 2.91E-65 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like BUMPUSDA_RS00855 33698cfba5c484f09d092ef48217d206 312 SMART SM01400 1 118 9.1E-76 T 23-04-2016 BUMPUSDA_RS00855 33698cfba5c484f09d092ef48217d206 312 Pfam PF14572 Phosphoribosyl synthetase-associated domain 202 310 1.1E-29 T 23-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 BUMPUSDA_RS00855 33698cfba5c484f09d092ef48217d206 312 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 1 311 4.1E-123 T 23-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 BUMPUSDA_RS00855 33698cfba5c484f09d092ef48217d206 312 Gene3D G3DSA:3.40.50.2020 158 280 2.9E-50 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like BUMPUSDA_RS00855 33698cfba5c484f09d092ef48217d206 312 PANTHER PTHR10210 1 312 1.1E-183 T 23-04-2016 BUMPUSDA_RS00855 33698cfba5c484f09d092ef48217d206 312 Gene3D G3DSA:3.40.50.2020 1 157 1.4E-70 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like BUMPUSDA_RS00855 33698cfba5c484f09d092ef48217d206 312 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 1 311 48.48 T 23-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 BUMPUSDA_RS00855 33698cfba5c484f09d092ef48217d206 312 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 126 141 - T 23-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 BUMPUSDA_RS00330 c4bdd60fd97854e93ac2595ffd72c9c1 85 PANTHER PTHR33705 1 84 1.9E-33 T 23-04-2016 BUMPUSDA_RS00330 c4bdd60fd97854e93ac2595ffd72c9c1 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 8.5E-20 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like BUMPUSDA_RS00330 c4bdd60fd97854e93ac2595ffd72c9c1 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 8.5E-20 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like BUMPUSDA_RS00330 c4bdd60fd97854e93ac2595ffd72c9c1 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 8.5E-20 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like BUMPUSDA_RS00330 c4bdd60fd97854e93ac2595ffd72c9c1 85 Gene3D G3DSA:3.30.1340.10 1 82 5.2E-31 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like BUMPUSDA_RS00330 c4bdd60fd97854e93ac2595ffd72c9c1 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 23-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site BUMPUSDA_RS00330 c4bdd60fd97854e93ac2595ffd72c9c1 85 PANTHER PTHR33705:SF1 1 84 1.9E-33 T 23-04-2016 BUMPUSDA_RS00330 c4bdd60fd97854e93ac2595ffd72c9c1 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 1.4E-25 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like BUMPUSDA_RS00330 c4bdd60fd97854e93ac2595ffd72c9c1 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 23-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site BUMPUSDA_RS00330 c4bdd60fd97854e93ac2595ffd72c9c1 85 SUPERFAMILY SSF55594 1 82 7.85E-27 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like BUMPUSDA_RS00330 c4bdd60fd97854e93ac2595ffd72c9c1 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 9.3E-29 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like BUMPUSDA_RS00760 822bb45ae79cd3a7fbbb0ce8822d13ef 86 Pfam PF01649 Ribosomal protein S20 2 83 4.5E-23 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS00760 822bb45ae79cd3a7fbbb0ce8822d13ef 86 PANTHER PTHR33398 2 86 1.6E-22 T 23-04-2016 BUMPUSDA_RS00760 822bb45ae79cd3a7fbbb0ce8822d13ef 86 Gene3D G3DSA:1.20.58.110 1 86 3.1E-24 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS00760 822bb45ae79cd3a7fbbb0ce8822d13ef 86 SUPERFAMILY SSF46992 3 86 4.97E-25 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS00760 822bb45ae79cd3a7fbbb0ce8822d13ef 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 1.5E-23 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS00760 822bb45ae79cd3a7fbbb0ce8822d13ef 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 14.818 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS00760 822bb45ae79cd3a7fbbb0ce8822d13ef 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 14 85 1.0E-27 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS00710 bfc426550652c1207d5285060d42b2d2 273 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 12 264 7.4E-72 T 23-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 BUMPUSDA_RS00710 bfc426550652c1207d5285060d42b2d2 273 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 42 69 - T 23-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 BUMPUSDA_RS00710 bfc426550652c1207d5285060d42b2d2 273 Gene3D G3DSA:1.10.8.100 202 266 9.0E-19 T 23-04-2016 IPR023165 rRNA adenine dimethylase-like BUMPUSDA_RS00710 bfc426550652c1207d5285060d42b2d2 273 PANTHER PTHR11727 10 266 2.8E-69 T 23-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm BUMPUSDA_RS00710 bfc426550652c1207d5285060d42b2d2 273 Gene3D G3DSA:3.40.50.150 9 197 1.8E-55 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BUMPUSDA_RS00710 bfc426550652c1207d5285060d42b2d2 273 SUPERFAMILY SSF53335 18 266 3.16E-67 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BUMPUSDA_RS00710 bfc426550652c1207d5285060d42b2d2 273 SMART SM00650 26 198 3.1E-62 T 23-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 BUMPUSDA_RS00710 bfc426550652c1207d5285060d42b2d2 273 Pfam PF00398 Ribosomal RNA adenine dimethylase 14 264 1.9E-60 T 23-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm BUMPUSDA_RS00710 bfc426550652c1207d5285060d42b2d2 273 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 10 265 49.274 T 23-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 BUMPUSDA_RS02145 41a460d88bb6c5944e060b51a78c3b2c 72 PANTHER PTHR37485:SF1 2 62 7.9E-13 T 23-04-2016 BUMPUSDA_RS02145 41a460d88bb6c5944e060b51a78c3b2c 72 Pfam PF04977 Septum formation initiator 11 67 7.7E-10 T 23-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 BUMPUSDA_RS02145 41a460d88bb6c5944e060b51a78c3b2c 72 PANTHER PTHR37485 2 62 7.9E-13 T 23-04-2016 BUMPUSDA_RS02145 41a460d88bb6c5944e060b51a78c3b2c 72 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 70 20.773 T 23-04-2016 IPR023081 Cell division protein FtsB BUMPUSDA_RS02265 5a0b183ed9ce6efb7ea4d0d7b2a79668 335 Gene3D G3DSA:1.10.8.60 146 223 2.0E-15 T 23-04-2016 BUMPUSDA_RS02265 5a0b183ed9ce6efb7ea4d0d7b2a79668 335 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 215 332 2.9E-21 T 23-04-2016 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BUMPUSDA_RS02265 5a0b183ed9ce6efb7ea4d0d7b2a79668 335 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 20 330 4.2E-67 T 23-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 BUMPUSDA_RS02265 5a0b183ed9ce6efb7ea4d0d7b2a79668 335 Gene3D G3DSA:1.20.272.20 224 332 3.4E-26 T 23-04-2016 BUMPUSDA_RS02265 5a0b183ed9ce6efb7ea4d0d7b2a79668 335 Pfam PF06144 DNA polymerase III, delta subunit 21 189 5.4E-28 T 23-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 BUMPUSDA_RS02265 5a0b183ed9ce6efb7ea4d0d7b2a79668 335 SUPERFAMILY SSF48019 212 331 3.23E-22 T 23-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 BUMPUSDA_RS02265 5a0b183ed9ce6efb7ea4d0d7b2a79668 335 Gene3D G3DSA:3.40.50.300 1 139 2.5E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02265 5a0b183ed9ce6efb7ea4d0d7b2a79668 335 PANTHER PTHR34388 1 332 4.2E-27 T 23-04-2016 BUMPUSDA_RS02265 5a0b183ed9ce6efb7ea4d0d7b2a79668 335 SUPERFAMILY SSF52540 1 209 2.12E-26 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01710 849ad3c82a8d49b41eca115bbe2bc8e5 219 PANTHER PTHR36307 66 217 3.3E-21 T 23-04-2016 BUMPUSDA_RS01710 849ad3c82a8d49b41eca115bbe2bc8e5 219 SMART SM00858 95 157 1.1E-5 T 23-04-2016 IPR013974 SAF domain BUMPUSDA_RS01710 849ad3c82a8d49b41eca115bbe2bc8e5 219 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 84 217 1.2E-35 T 23-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal BUMPUSDA_RS01710 849ad3c82a8d49b41eca115bbe2bc8e5 219 Pfam PF13144 Chaperone for flagella basal body P-ring formation 26 217 4.2E-31 T 23-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal BUMPUSDA_RS02940 6152f108d7e866749842f8941fba54ca 231 SMART SM00646 69 228 3.1E-32 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 BUMPUSDA_RS02940 6152f108d7e866749842f8941fba54ca 231 SUPERFAMILY SSF53187 155 231 6.7E-47 T 23-04-2016 BUMPUSDA_RS02940 6152f108d7e866749842f8941fba54ca 231 SUPERFAMILY SSF53187 7 103 6.7E-47 T 23-04-2016 BUMPUSDA_RS02940 6152f108d7e866749842f8941fba54ca 231 PANTHER PTHR30404:SF1 4 231 1.3E-62 T 23-04-2016 BUMPUSDA_RS02940 6152f108d7e866749842f8941fba54ca 231 PANTHER PTHR30404 4 231 1.3E-62 T 23-04-2016 BUMPUSDA_RS02940 6152f108d7e866749842f8941fba54ca 231 Gene3D G3DSA:3.40.630.40 156 231 2.2E-51 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 BUMPUSDA_RS02940 6152f108d7e866749842f8941fba54ca 231 Gene3D G3DSA:3.40.630.40 7 104 2.2E-51 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 BUMPUSDA_RS02940 6152f108d7e866749842f8941fba54ca 231 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 9 228 1.0E-48 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 BUMPUSDA_RS02655 301c349e8b847258c134aac31c638db8 273 SMART SM01382 124 251 9.8E-91 T 23-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02655 301c349e8b847258c134aac31c638db8 273 Gene3D G3DSA:2.30.30.30 119 195 9.4E-34 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 BUMPUSDA_RS02655 301c349e8b847258c134aac31c638db8 273 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 1.1E-31 T 23-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02655 301c349e8b847258c134aac31c638db8 273 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 272 46.482 T 23-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 BUMPUSDA_RS02655 301c349e8b847258c134aac31c638db8 273 Gene3D G3DSA:2.40.50.140 1 114 1.9E-49 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS02655 301c349e8b847258c134aac31c638db8 273 PANTHER PTHR13691 1 273 7.8E-138 T 23-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02655 301c349e8b847258c134aac31c638db8 273 SMART SM01383 42 118 5.9E-44 T 23-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02655 301c349e8b847258c134aac31c638db8 273 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 249 2.4E-56 T 23-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02655 301c349e8b847258c134aac31c638db8 273 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 23-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02655 301c349e8b847258c134aac31c638db8 273 SUPERFAMILY SSF50104 126 268 8.42E-60 T 23-04-2016 IPR008991 Translation protein SH3-like domain BUMPUSDA_RS02655 301c349e8b847258c134aac31c638db8 273 Gene3D G3DSA:4.10.950.10 196 273 7.5E-35 T 23-04-2016 IPR014726 Ribosomal protein L2, domain 3 BUMPUSDA_RS02655 301c349e8b847258c134aac31c638db8 273 PANTHER PTHR13691:SF5 1 273 7.8E-138 T 23-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 BUMPUSDA_RS02655 301c349e8b847258c134aac31c638db8 273 PIRSF PIRSF002158 13 273 2.7E-101 T 23-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02655 301c349e8b847258c134aac31c638db8 273 SUPERFAMILY SSF50249 2 125 1.95E-47 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS02655 301c349e8b847258c134aac31c638db8 273 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 272 1.5E-128 T 23-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 BUMPUSDA_RS02615 d2caf2887b77ddf9fbe3037554c93266 103 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 18.693 T 23-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02615 d2caf2887b77ddf9fbe3037554c93266 103 SUPERFAMILY SSF50104 4 100 1.5E-28 T 23-04-2016 IPR008991 Translation protein SH3-like domain BUMPUSDA_RS02615 d2caf2887b77ddf9fbe3037554c93266 103 PANTHER PTHR12903 4 103 7.2E-36 T 23-04-2016 BUMPUSDA_RS02615 d2caf2887b77ddf9fbe3037554c93266 103 Gene3D G3DSA:2.30.30.30 4 92 2.7E-17 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 BUMPUSDA_RS02615 d2caf2887b77ddf9fbe3037554c93266 103 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 103 2.3E-24 T 23-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02615 d2caf2887b77ddf9fbe3037554c93266 103 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 3.9E-36 T 23-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS00640 815bcdb092ac5055c68bc74be152a754 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 4.0E-50 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 BUMPUSDA_RS00640 815bcdb092ac5055c68bc74be152a754 118 PANTHER PTHR10986 2 117 1.8E-62 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 BUMPUSDA_RS00640 815bcdb092ac5055c68bc74be152a754 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 BUMPUSDA_RS00640 815bcdb092ac5055c68bc74be152a754 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 71 2.0E-13 T 23-04-2016 BUMPUSDA_RS00640 815bcdb092ac5055c68bc74be152a754 118 Pfam PF00453 Ribosomal protein L20 3 108 2.0E-47 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 BUMPUSDA_RS00640 815bcdb092ac5055c68bc74be152a754 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.257 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 BUMPUSDA_RS00640 815bcdb092ac5055c68bc74be152a754 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.7E-40 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 BUMPUSDA_RS00640 815bcdb092ac5055c68bc74be152a754 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.7E-40 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 BUMPUSDA_RS00640 815bcdb092ac5055c68bc74be152a754 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.7E-40 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 BUMPUSDA_RS00640 815bcdb092ac5055c68bc74be152a754 118 SUPERFAMILY SSF74731 3 117 6.28E-49 T 23-04-2016 BUMPUSDA_RS00640 815bcdb092ac5055c68bc74be152a754 118 Gene3D G3DSA:1.10.1900.20 55 117 4.9E-28 T 23-04-2016 BUMPUSDA_RS00640 815bcdb092ac5055c68bc74be152a754 118 PANTHER PTHR10986:SF12 2 117 1.8E-62 T 23-04-2016 BUMPUSDA_RS02535 c5ab8e8167a538f5d4ad79b1ad551a70 314 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 135 158 - T 23-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BUMPUSDA_RS02535 c5ab8e8167a538f5d4ad79b1ad551a70 314 SUPERFAMILY SSF53328 3 203 1.14E-60 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BUMPUSDA_RS02535 c5ab8e8167a538f5d4ad79b1ad551a70 314 PANTHER PTHR11138 4 299 8.0E-92 T 23-04-2016 BUMPUSDA_RS02535 c5ab8e8167a538f5d4ad79b1ad551a70 314 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 4 307 1.5E-89 T 23-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BUMPUSDA_RS02535 c5ab8e8167a538f5d4ad79b1ad551a70 314 Pfam PF00551 Formyl transferase 5 183 6.3E-43 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BUMPUSDA_RS02535 c5ab8e8167a538f5d4ad79b1ad551a70 314 Pfam PF02911 Formyl transferase, C-terminal domain 206 301 2.8E-24 T 23-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BUMPUSDA_RS02535 c5ab8e8167a538f5d4ad79b1ad551a70 314 Gene3D G3DSA:3.10.25.10 209 304 2.8E-26 T 23-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BUMPUSDA_RS02535 c5ab8e8167a538f5d4ad79b1ad551a70 314 SUPERFAMILY SSF50486 207 308 4.71E-27 T 23-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 BUMPUSDA_RS02535 c5ab8e8167a538f5d4ad79b1ad551a70 314 Gene3D G3DSA:3.40.50.170 3 207 5.7E-63 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BUMPUSDA_RS02535 c5ab8e8167a538f5d4ad79b1ad551a70 314 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 4 307 31.234 T 23-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BUMPUSDA_RS01330 b5d2ef7eaaca06b2a848f71f4240ab9a 211 SUPERFAMILY SSF101322 2 209 3.66E-62 T 23-04-2016 IPR007451 Uncharacterised protein family UPF0274 BUMPUSDA_RS01330 b5d2ef7eaaca06b2a848f71f4240ab9a 211 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 8 186 9.0E-66 T 23-04-2016 IPR007451 Uncharacterised protein family UPF0274 BUMPUSDA_RS01330 b5d2ef7eaaca06b2a848f71f4240ab9a 211 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 205 27.669 T 23-04-2016 IPR007451 Uncharacterised protein family UPF0274 BUMPUSDA_RS01330 b5d2ef7eaaca06b2a848f71f4240ab9a 211 Pfam PF04356 Protein of unknown function (DUF489) 7 197 8.7E-55 T 23-04-2016 IPR007451 Uncharacterised protein family UPF0274 BUMPUSDA_RS01330 b5d2ef7eaaca06b2a848f71f4240ab9a 211 PANTHER PTHR38100 1 207 6.2E-50 T 23-04-2016 BUMPUSDA_RS01330 b5d2ef7eaaca06b2a848f71f4240ab9a 211 Gene3D G3DSA:1.10.3890.10 2 207 5.5E-60 T 23-04-2016 IPR007451 Uncharacterised protein family UPF0274 BUMPUSDA_RS01330 b5d2ef7eaaca06b2a848f71f4240ab9a 211 PANTHER PTHR38100:SF1 1 207 6.2E-50 T 23-04-2016 BUMPUSDA_RS00875 d981756f32f4ba9aaee2fe31f765d4fa 269 SUPERFAMILY SSF48452 190 251 5.48E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BUMPUSDA_RS00875 d981756f32f4ba9aaee2fe31f765d4fa 269 Gene3D G3DSA:1.25.40.10 189 250 2.7E-4 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BUMPUSDA_RS00875 d981756f32f4ba9aaee2fe31f765d4fa 269 PANTHER PTHR31350 24 263 6.9E-39 T 23-04-2016 BUMPUSDA_RS00875 d981756f32f4ba9aaee2fe31f765d4fa 269 Pfam PF13369 Transglutaminase-like superfamily 33 184 9.7E-40 T 23-04-2016 IPR032698 Protein SirB1, N-terminal BUMPUSDA_RS00875 d981756f32f4ba9aaee2fe31f765d4fa 269 Pfam PF13371 Tetratricopeptide repeat 187 258 1.8E-23 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 BUMPUSDA_RS02400 1e64ddba282791c22cc03e9c2c1d2cb6 306 PIRSF PIRSF000292 1 305 1.0E-114 T 23-04-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 BUMPUSDA_RS02400 1e64ddba282791c22cc03e9c2c1d2cb6 306 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 149 220 3.5E-9 T 23-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 BUMPUSDA_RS02400 1e64ddba282791c22cc03e9c2c1d2cb6 306 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 13 236 8.5E-111 T 23-04-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 BUMPUSDA_RS02400 1e64ddba282791c22cc03e9c2c1d2cb6 306 SUPERFAMILY SSF81464 29 116 8.5E-21 T 23-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 BUMPUSDA_RS02400 1e64ddba282791c22cc03e9c2c1d2cb6 306 SUPERFAMILY SSF49503 125 278 1.59E-48 T 23-04-2016 IPR008972 Cupredoxin BUMPUSDA_RS02400 1e64ddba282791c22cc03e9c2c1d2cb6 306 Gene3D G3DSA:1.10.287.90 29 113 2.6E-27 T 23-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 BUMPUSDA_RS02400 1e64ddba282791c22cc03e9c2c1d2cb6 306 PANTHER PTHR22888 1 268 6.5E-110 T 23-04-2016 BUMPUSDA_RS02400 1e64ddba282791c22cc03e9c2c1d2cb6 306 Pfam PF06481 COX Aromatic Rich Motif 241 279 3.9E-11 T 23-04-2016 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 BUMPUSDA_RS02400 1e64ddba282791c22cc03e9c2c1d2cb6 306 PANTHER PTHR22888:SF13 1 268 6.5E-110 T 23-04-2016 BUMPUSDA_RS02400 1e64ddba282791c22cc03e9c2c1d2cb6 306 Gene3D G3DSA:2.60.40.420 125 278 2.1E-38 T 23-04-2016 IPR008972 Cupredoxin BUMPUSDA_RS00365 640959a69b378333f2d02f87ecfc4b97 103 Pfam PF02049 Flagellar hook-basal body complex protein FliE 21 103 5.8E-24 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BUMPUSDA_RS00365 640959a69b378333f2d02f87ecfc4b97 103 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 3 103 3.8E-23 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BUMPUSDA_RS00365 640959a69b378333f2d02f87ecfc4b97 103 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 4 103 16.922 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BUMPUSDA_RS00365 640959a69b378333f2d02f87ecfc4b97 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 32 48 1.2E-12 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BUMPUSDA_RS00365 640959a69b378333f2d02f87ecfc4b97 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 67 83 1.2E-12 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BUMPUSDA_RS00365 640959a69b378333f2d02f87ecfc4b97 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 88 101 1.2E-12 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BUMPUSDA_RS00365 640959a69b378333f2d02f87ecfc4b97 103 PANTHER PTHR34653 15 103 1.3E-18 T 23-04-2016 BUMPUSDA_RS01490 57f5a5b1c352a23827425d0af27881ac 399 Pfam PF02687 FtsX-like permease family 269 392 2.5E-12 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 BUMPUSDA_RS01490 57f5a5b1c352a23827425d0af27881ac 399 PANTHER PTHR30489:SF8 1 399 2.8E-72 T 23-04-2016 BUMPUSDA_RS01490 57f5a5b1c352a23827425d0af27881ac 399 Pfam PF12704 MacB-like periplasmic core domain 28 192 1.9E-12 T 23-04-2016 IPR025857 MacB-like periplasmic core domain BUMPUSDA_RS01490 57f5a5b1c352a23827425d0af27881ac 399 PANTHER PTHR30489 1 399 2.8E-72 T 23-04-2016 BUMPUSDA_RS02670 cb666159da91661dc559a0c7ecb86439 209 Gene3D G3DSA:2.40.30.10 158 200 2.6E-8 T 23-04-2016 BUMPUSDA_RS02670 cb666159da91661dc559a0c7ecb86439 209 Gene3D G3DSA:2.40.30.10 3 32 2.6E-8 T 23-04-2016 BUMPUSDA_RS02670 cb666159da91661dc559a0c7ecb86439 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 38.245 T 23-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02670 cb666159da91661dc559a0c7ecb86439 209 PANTHER PTHR11229 1 209 7.7E-106 T 23-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02670 cb666159da91661dc559a0c7ecb86439 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 23-04-2016 IPR019926 Ribosomal protein L3, conserved site BUMPUSDA_RS02670 cb666159da91661dc559a0c7ecb86439 209 Gene3D G3DSA:4.10.960.10 76 157 6.3E-34 T 23-04-2016 BUMPUSDA_RS02670 cb666159da91661dc559a0c7ecb86439 209 SUPERFAMILY SSF50447 1 208 1.94E-76 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain BUMPUSDA_RS02670 cb666159da91661dc559a0c7ecb86439 209 Pfam PF00297 Ribosomal protein L3 34 183 1.6E-16 T 23-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02670 cb666159da91661dc559a0c7ecb86439 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 6.7E-87 T 23-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS00635 a3ba2ed67db5d3f04e6242e45134305d 65 Pfam PF01632 Ribosomal protein L35 2 62 3.1E-22 T 23-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS00635 a3ba2ed67db5d3f04e6242e45134305d 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 7.3E-22 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS00635 a3ba2ed67db5d3f04e6242e45134305d 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 7.3E-22 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS00635 a3ba2ed67db5d3f04e6242e45134305d 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 7.3E-22 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS00635 a3ba2ed67db5d3f04e6242e45134305d 65 PANTHER PTHR33343 1 65 2.9E-25 T 23-04-2016 BUMPUSDA_RS00635 a3ba2ed67db5d3f04e6242e45134305d 65 SUPERFAMILY SSF143034 2 64 5.1E-22 T 23-04-2016 BUMPUSDA_RS00635 a3ba2ed67db5d3f04e6242e45134305d 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.511 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS00635 a3ba2ed67db5d3f04e6242e45134305d 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 5.5E-25 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS00635 a3ba2ed67db5d3f04e6242e45134305d 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 23-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS00745 59cce307d8f2d4862dfd9ac0c2de42e6 162 Pfam PF01252 Signal peptidase (SPase) II 16 155 5.8E-32 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 BUMPUSDA_RS00745 59cce307d8f2d4862dfd9ac0c2de42e6 162 ProSitePatterns PS00855 Signal peptidases II signature. 105 117 - T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 BUMPUSDA_RS00745 59cce307d8f2d4862dfd9ac0c2de42e6 162 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 102 117 2.8E-16 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 BUMPUSDA_RS00745 59cce307d8f2d4862dfd9ac0c2de42e6 162 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 138 154 2.8E-16 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 BUMPUSDA_RS00745 59cce307d8f2d4862dfd9ac0c2de42e6 162 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 54 62 2.8E-16 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 BUMPUSDA_RS00745 59cce307d8f2d4862dfd9ac0c2de42e6 162 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 8 160 14.997 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 BUMPUSDA_RS00745 59cce307d8f2d4862dfd9ac0c2de42e6 162 PANTHER PTHR33695 12 155 2.0E-40 T 23-04-2016 BUMPUSDA_RS00745 59cce307d8f2d4862dfd9ac0c2de42e6 162 TIGRFAM TIGR00077 lspA: signal peptidase II 4 157 2.2E-38 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 BUMPUSDA_RS00745 59cce307d8f2d4862dfd9ac0c2de42e6 162 PANTHER PTHR33695:SF1 12 155 2.0E-40 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 BUMPUSDA_RS00105 a8cfd43bc902cdc6a13712381256ddbd 189 Gene3D G3DSA:2.40.50.140 130 188 2.1E-22 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS00105 a8cfd43bc902cdc6a13712381256ddbd 189 PANTHER PTHR30053 1 189 2.0E-65 T 23-04-2016 BUMPUSDA_RS00105 a8cfd43bc902cdc6a13712381256ddbd 189 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 23-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 BUMPUSDA_RS00105 a8cfd43bc902cdc6a13712381256ddbd 189 SMART SM00841 131 187 6.1E-25 T 23-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 BUMPUSDA_RS00105 a8cfd43bc902cdc6a13712381256ddbd 189 SUPERFAMILY SSF50104 4 65 1.62E-16 T 23-04-2016 IPR008991 Translation protein SH3-like domain BUMPUSDA_RS00105 a8cfd43bc902cdc6a13712381256ddbd 189 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 6 61 3.4E-21 T 23-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 BUMPUSDA_RS00105 a8cfd43bc902cdc6a13712381256ddbd 189 Gene3D G3DSA:2.40.50.140 66 127 6.2E-18 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS00105 a8cfd43bc902cdc6a13712381256ddbd 189 SUPERFAMILY SSF50249 130 188 3.6E-14 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS00105 a8cfd43bc902cdc6a13712381256ddbd 189 SMART SM01185 69 123 9.7E-17 T 23-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 BUMPUSDA_RS00105 a8cfd43bc902cdc6a13712381256ddbd 189 Hamap MF_00141 Elongation factor P [efp]. 3 188 45.031 T 23-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 BUMPUSDA_RS00105 a8cfd43bc902cdc6a13712381256ddbd 189 Pfam PF09285 Elongation factor P, C-terminal 131 187 6.1E-21 T 23-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 BUMPUSDA_RS00105 a8cfd43bc902cdc6a13712381256ddbd 189 Gene3D G3DSA:2.30.30.30 5 65 1.2E-22 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 BUMPUSDA_RS00105 a8cfd43bc902cdc6a13712381256ddbd 189 SUPERFAMILY SSF50249 69 127 5.14E-13 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS00105 a8cfd43bc902cdc6a13712381256ddbd 189 PIRSF PIRSF005901 2 189 1.1E-55 T 23-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 BUMPUSDA_RS00105 a8cfd43bc902cdc6a13712381256ddbd 189 Pfam PF01132 Elongation factor P (EF-P) OB domain 74 123 1.8E-16 T 23-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 BUMPUSDA_RS00105 a8cfd43bc902cdc6a13712381256ddbd 189 TIGRFAM TIGR00038 efp: translation elongation factor P 5 188 2.7E-66 T 23-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 BUMPUSDA_RS02720 f221f579a597b1ee2e598965af5de04b 405 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 14 401 44.46 T 23-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 BUMPUSDA_RS02720 f221f579a597b1ee2e598965af5de04b 405 Gene3D G3DSA:3.90.1150.10 307 402 2.4E-30 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 BUMPUSDA_RS02720 f221f579a597b1ee2e598965af5de04b 405 Gene3D G3DSA:3.90.1150.10 15 60 2.4E-30 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 BUMPUSDA_RS02720 f221f579a597b1ee2e598965af5de04b 405 Gene3D G3DSA:3.40.640.10 61 303 4.6E-86 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 BUMPUSDA_RS02720 f221f579a597b1ee2e598965af5de04b 405 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 223 260 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BUMPUSDA_RS02720 f221f579a597b1ee2e598965af5de04b 405 Pfam PF00202 Aminotransferase class-III 24 400 1.9E-122 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BUMPUSDA_RS02720 f221f579a597b1ee2e598965af5de04b 405 SUPERFAMILY SSF53383 18 401 2.36E-122 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase BUMPUSDA_RS02720 f221f579a597b1ee2e598965af5de04b 405 PANTHER PTHR11986:SF71 1 402 1.6E-195 T 23-04-2016 BUMPUSDA_RS02720 f221f579a597b1ee2e598965af5de04b 405 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 9 402 2.0E-186 T 23-04-2016 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 BUMPUSDA_RS02720 f221f579a597b1ee2e598965af5de04b 405 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 17 400 3.3E-145 T 23-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 BUMPUSDA_RS02720 f221f579a597b1ee2e598965af5de04b 405 PANTHER PTHR11986 1 402 1.6E-195 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BUMPUSDA_RS01650 83f8c650e0f5693a26b992db7defc7ad 526 SMART SM01091 438 518 2.3E-15 T 23-04-2016 IPR005170 Transporter-associated domain BUMPUSDA_RS01650 83f8c650e0f5693a26b992db7defc7ad 526 SUPERFAMILY SSF54631 295 429 5.56E-20 T 23-04-2016 BUMPUSDA_RS01650 83f8c650e0f5693a26b992db7defc7ad 526 SUPERFAMILY SSF56176 441 521 6.54E-16 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 BUMPUSDA_RS01650 83f8c650e0f5693a26b992db7defc7ad 526 Pfam PF03471 Transporter associated domain 442 517 1.9E-13 T 23-04-2016 IPR005170 Transporter-associated domain BUMPUSDA_RS01650 83f8c650e0f5693a26b992db7defc7ad 526 Gene3D G3DSA:3.10.580.10 293 420 5.6E-13 T 23-04-2016 BUMPUSDA_RS01650 83f8c650e0f5693a26b992db7defc7ad 526 PANTHER PTHR22777:SF15 1 523 1.4E-266 T 23-04-2016 BUMPUSDA_RS01650 83f8c650e0f5693a26b992db7defc7ad 526 PANTHER PTHR22777 1 523 1.4E-266 T 23-04-2016 BUMPUSDA_RS01650 83f8c650e0f5693a26b992db7defc7ad 526 Pfam PF03741 Integral membrane protein TerC family 14 203 5.6E-46 T 23-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 BUMPUSDA_RS01650 83f8c650e0f5693a26b992db7defc7ad 526 Gene3D G3DSA:3.30.465.10 421 516 3.2E-18 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 BUMPUSDA_RS00075 01d1fb1a6180cdd46382404ea48b7a9e 530 Pfam PF14849 YidC periplasmic domain 54 335 8.7E-75 T 23-04-2016 IPR028053 Membrane insertase YidC, N-terminal BUMPUSDA_RS00075 01d1fb1a6180cdd46382404ea48b7a9e 530 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 343 6.4E-98 T 23-04-2016 IPR028053 Membrane insertase YidC, N-terminal BUMPUSDA_RS00075 01d1fb1a6180cdd46382404ea48b7a9e 530 Pfam PF02096 60Kd inner membrane protein 346 523 5.8E-54 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 BUMPUSDA_RS00075 01d1fb1a6180cdd46382404ea48b7a9e 530 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 527 24.113 T 23-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 BUMPUSDA_RS00075 01d1fb1a6180cdd46382404ea48b7a9e 530 PRINTS PR00701 60kDa inner membrane protein signature 58 79 3.5E-97 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 BUMPUSDA_RS00075 01d1fb1a6180cdd46382404ea48b7a9e 530 PRINTS PR00701 60kDa inner membrane protein signature 150 170 3.5E-97 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 BUMPUSDA_RS00075 01d1fb1a6180cdd46382404ea48b7a9e 530 PRINTS PR00701 60kDa inner membrane protein signature 454 476 3.5E-97 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 BUMPUSDA_RS00075 01d1fb1a6180cdd46382404ea48b7a9e 530 PRINTS PR00701 60kDa inner membrane protein signature 2 23 3.5E-97 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 BUMPUSDA_RS00075 01d1fb1a6180cdd46382404ea48b7a9e 530 PRINTS PR00701 60kDa inner membrane protein signature 491 514 3.5E-97 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 BUMPUSDA_RS00075 01d1fb1a6180cdd46382404ea48b7a9e 530 PRINTS PR00701 60kDa inner membrane protein signature 209 227 3.5E-97 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 BUMPUSDA_RS00075 01d1fb1a6180cdd46382404ea48b7a9e 530 PRINTS PR00701 60kDa inner membrane protein signature 243 258 3.5E-97 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 BUMPUSDA_RS00075 01d1fb1a6180cdd46382404ea48b7a9e 530 PRINTS PR00701 60kDa inner membrane protein signature 407 430 3.5E-97 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 BUMPUSDA_RS00075 01d1fb1a6180cdd46382404ea48b7a9e 530 PRINTS PR00701 60kDa inner membrane protein signature 316 336 3.5E-97 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 BUMPUSDA_RS00075 01d1fb1a6180cdd46382404ea48b7a9e 530 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 345 524 9.7E-63 T 23-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal BUMPUSDA_RS00075 01d1fb1a6180cdd46382404ea48b7a9e 530 PANTHER PTHR12428:SF14 157 523 5.4E-109 T 23-04-2016 BUMPUSDA_RS00075 01d1fb1a6180cdd46382404ea48b7a9e 530 PANTHER PTHR12428 157 523 5.4E-109 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 BUMPUSDA_RS00075 01d1fb1a6180cdd46382404ea48b7a9e 530 PRINTS PR01900 YidC translocation/secretion protein signature 460 475 8.2E-25 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 BUMPUSDA_RS00075 01d1fb1a6180cdd46382404ea48b7a9e 530 PRINTS PR01900 YidC translocation/secretion protein signature 480 504 8.2E-25 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 BUMPUSDA_RS00075 01d1fb1a6180cdd46382404ea48b7a9e 530 PRINTS PR01900 YidC translocation/secretion protein signature 331 347 8.2E-25 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 BUMPUSDA_RS00920 bd560c8aaa8142888ee85e40ab7c18c8 197 Pfam PF00578 AhpC/TSA family 5 139 1.9E-34 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 BUMPUSDA_RS00920 bd560c8aaa8142888ee85e40ab7c18c8 197 PANTHER PTHR10681 1 194 2.2E-76 T 23-04-2016 BUMPUSDA_RS00920 bd560c8aaa8142888ee85e40ab7c18c8 197 Gene3D G3DSA:3.30.1020.10 162 195 1.1E-12 T 23-04-2016 BUMPUSDA_RS00920 bd560c8aaa8142888ee85e40ab7c18c8 197 SUPERFAMILY SSF52833 1 195 1.18E-63 T 23-04-2016 IPR012336 Thioredoxin-like fold BUMPUSDA_RS00920 bd560c8aaa8142888ee85e40ab7c18c8 197 Gene3D G3DSA:3.40.30.10 4 161 2.5E-57 T 23-04-2016 IPR012336 Thioredoxin-like fold BUMPUSDA_RS00920 bd560c8aaa8142888ee85e40ab7c18c8 197 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 194 2.7E-10 T 23-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 BUMPUSDA_RS00920 bd560c8aaa8142888ee85e40ab7c18c8 197 PIRSF PIRSF000239 1 197 5.7E-57 T 23-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 BUMPUSDA_RS00240 282b8f30fb2e9cee03899cb1968aaedc 381 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 11 375 2.4E-122 T 23-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 BUMPUSDA_RS00240 282b8f30fb2e9cee03899cb1968aaedc 381 Pfam PF01546 Peptidase family M20/M25/M40 75 377 1.9E-30 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 BUMPUSDA_RS00240 282b8f30fb2e9cee03899cb1968aaedc 381 Gene3D G3DSA:3.30.70.360 189 287 6.5E-21 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain BUMPUSDA_RS00240 282b8f30fb2e9cee03899cb1968aaedc 381 PANTHER PTHR11014 8 380 7.2E-149 T 23-04-2016 BUMPUSDA_RS00240 282b8f30fb2e9cee03899cb1968aaedc 381 Gene3D G3DSA:3.40.630.10 322 380 1.9E-55 T 23-04-2016 BUMPUSDA_RS00240 282b8f30fb2e9cee03899cb1968aaedc 381 Gene3D G3DSA:3.40.630.10 5 188 1.9E-55 T 23-04-2016 BUMPUSDA_RS00240 282b8f30fb2e9cee03899cb1968aaedc 381 PANTHER PTHR11014:SF75 8 380 7.2E-149 T 23-04-2016 BUMPUSDA_RS00240 282b8f30fb2e9cee03899cb1968aaedc 381 Pfam PF07687 Peptidase dimerisation domain 176 284 3.0E-23 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain BUMPUSDA_RS00240 282b8f30fb2e9cee03899cb1968aaedc 381 Hamap MF_01108 Acetylornithine deacetylase [argE]. 3 381 58.797 T 23-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 BUMPUSDA_RS00240 282b8f30fb2e9cee03899cb1968aaedc 381 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 74 83 - T 23-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 BUMPUSDA_RS00240 282b8f30fb2e9cee03899cb1968aaedc 381 SUPERFAMILY SSF55031 180 291 1.64E-18 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain BUMPUSDA_RS00240 282b8f30fb2e9cee03899cb1968aaedc 381 SUPERFAMILY SSF53187 304 380 1.14E-49 T 23-04-2016 BUMPUSDA_RS00240 282b8f30fb2e9cee03899cb1968aaedc 381 SUPERFAMILY SSF53187 5 179 1.14E-49 T 23-04-2016 BUMPUSDA_RS01215 3eb72aef892c2c2cc06b007abaa64d31 380 PANTHER PTHR30531:SF0 7 360 1.7E-107 T 23-04-2016 BUMPUSDA_RS01215 3eb72aef892c2c2cc06b007abaa64d31 380 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 353 1.2E-126 T 23-04-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 BUMPUSDA_RS01215 3eb72aef892c2c2cc06b007abaa64d31 380 Gene3D G3DSA:3.40.1690.10 217 356 2.8E-54 T 23-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal BUMPUSDA_RS01215 3eb72aef892c2c2cc06b007abaa64d31 380 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 271 286 5.0E-31 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BUMPUSDA_RS01215 3eb72aef892c2c2cc06b007abaa64d31 380 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 227 244 5.0E-31 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BUMPUSDA_RS01215 3eb72aef892c2c2cc06b007abaa64d31 380 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 301 322 5.0E-31 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BUMPUSDA_RS01215 3eb72aef892c2c2cc06b007abaa64d31 380 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 207 225 5.0E-31 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BUMPUSDA_RS01215 3eb72aef892c2c2cc06b007abaa64d31 380 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 5.0E-31 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BUMPUSDA_RS01215 3eb72aef892c2c2cc06b007abaa64d31 380 PANTHER PTHR30531 7 360 1.7E-107 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BUMPUSDA_RS01215 3eb72aef892c2c2cc06b007abaa64d31 380 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 346 5.2E-105 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BUMPUSDA_RS01215 3eb72aef892c2c2cc06b007abaa64d31 380 SUPERFAMILY SSF160544 251 354 3.53E-34 T 23-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal BUMPUSDA_RS02105 f706546477553b0142b1589b24c4fb05 561 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 30 337 1.5E-110 T 23-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 BUMPUSDA_RS02105 f706546477553b0142b1589b24c4fb05 561 Gene3D G3DSA:2.40.240.10 462 555 9.7E-29 T 23-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 BUMPUSDA_RS02105 f706546477553b0142b1589b24c4fb05 561 Gene3D G3DSA:3.40.50.620 212 262 1.1E-39 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BUMPUSDA_RS02105 f706546477553b0142b1589b24c4fb05 561 Gene3D G3DSA:3.40.50.620 29 96 1.1E-39 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BUMPUSDA_RS02105 f706546477553b0142b1589b24c4fb05 561 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 536 3.1E-46 T 23-04-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS02105 f706546477553b0142b1589b24c4fb05 561 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 1.1E-9 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 BUMPUSDA_RS02105 f706546477553b0142b1589b24c4fb05 561 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 1.1E-9 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 BUMPUSDA_RS02105 f706546477553b0142b1589b24c4fb05 561 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 1.1E-9 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 BUMPUSDA_RS02105 f706546477553b0142b1589b24c4fb05 561 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 1.1E-9 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 BUMPUSDA_RS02105 f706546477553b0142b1589b24c4fb05 561 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 30 558 1.8E-232 T 23-04-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18 BUMPUSDA_RS02105 f706546477553b0142b1589b24c4fb05 561 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 557 48.385 T 23-04-2016 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 BUMPUSDA_RS02105 f706546477553b0142b1589b24c4fb05 561 Gene3D G3DSA:3.90.800.10 101 209 7.6E-45 T 23-04-2016 BUMPUSDA_RS02105 f706546477553b0142b1589b24c4fb05 561 SUPERFAMILY SSF50715 340 556 3.4E-66 T 23-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 BUMPUSDA_RS02105 f706546477553b0142b1589b24c4fb05 561 SUPERFAMILY SSF52374 29 346 1.72E-92 T 23-04-2016 BUMPUSDA_RS02105 f706546477553b0142b1589b24c4fb05 561 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS02105 f706546477553b0142b1589b24c4fb05 561 Gene3D G3DSA:2.40.240.10 348 461 2.7E-36 T 23-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 BUMPUSDA_RS02105 f706546477553b0142b1589b24c4fb05 561 PANTHER PTHR11451:SF29 9 247 8.3E-200 T 23-04-2016 BUMPUSDA_RS02105 f706546477553b0142b1589b24c4fb05 561 PANTHER PTHR11451:SF29 267 558 8.3E-200 T 23-04-2016 BUMPUSDA_RS02105 f706546477553b0142b1589b24c4fb05 561 PANTHER PTHR11451 9 247 8.3E-200 T 23-04-2016 BUMPUSDA_RS02105 f706546477553b0142b1589b24c4fb05 561 PANTHER PTHR11451 267 558 8.3E-200 T 23-04-2016 BUMPUSDA_RS02105 f706546477553b0142b1589b24c4fb05 561 Gene3D G3DSA:1.10.1160.10 263 339 1.4E-32 T 23-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 BUMPUSDA_RS01290 9f0dbae657957f33b360a77c0d0407f1 159 Gene3D G3DSA:3.40.140.10 3 149 2.4E-46 T 23-04-2016 BUMPUSDA_RS01290 9f0dbae657957f33b360a77c0d0407f1 159 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 10 151 40.329 T 23-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 BUMPUSDA_RS01290 9f0dbae657957f33b360a77c0d0407f1 159 Pfam PF14437 MafB19-like deaminase 5 151 2.6E-32 T 23-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 BUMPUSDA_RS01290 9f0dbae657957f33b360a77c0d0407f1 159 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 93 - T 23-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 BUMPUSDA_RS01290 9f0dbae657957f33b360a77c0d0407f1 159 PANTHER PTHR11079:SF72 6 152 6.4E-34 T 23-04-2016 BUMPUSDA_RS01290 9f0dbae657957f33b360a77c0d0407f1 159 PANTHER PTHR11079 6 152 6.4E-34 T 23-04-2016 BUMPUSDA_RS01290 9f0dbae657957f33b360a77c0d0407f1 159 SUPERFAMILY SSF53927 3 152 7.03E-44 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 BUMPUSDA_RS00295 9ed115105b349f679cc9f74454c0dccb 334 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 58.457 T 23-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 BUMPUSDA_RS00295 9ed115105b349f679cc9f74454c0dccb 334 SUPERFAMILY SSF53067 101 308 9.71E-37 T 23-04-2016 BUMPUSDA_RS00295 9ed115105b349f679cc9f74454c0dccb 334 SUPERFAMILY SSF53067 2 120 1.68E-25 T 23-04-2016 BUMPUSDA_RS00295 9ed115105b349f679cc9f74454c0dccb 334 PANTHER PTHR11735 1 334 1.9E-137 T 23-04-2016 BUMPUSDA_RS00295 9ed115105b349f679cc9f74454c0dccb 334 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 153 174 1.0E-46 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 BUMPUSDA_RS00295 9ed115105b349f679cc9f74454c0dccb 334 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 262 271 1.0E-46 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 BUMPUSDA_RS00295 9ed115105b349f679cc9f74454c0dccb 334 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 75 95 1.0E-46 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 BUMPUSDA_RS00295 9ed115105b349f679cc9f74454c0dccb 334 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 130 142 1.0E-46 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 BUMPUSDA_RS00295 9ed115105b349f679cc9f74454c0dccb 334 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 96 115 1.0E-46 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 BUMPUSDA_RS00295 9ed115105b349f679cc9f74454c0dccb 334 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.0E-46 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 BUMPUSDA_RS00295 9ed115105b349f679cc9f74454c0dccb 334 PANTHER PTHR11735:SF6 1 334 1.9E-137 T 23-04-2016 BUMPUSDA_RS00295 9ed115105b349f679cc9f74454c0dccb 334 ProSitePatterns PS01016 Glycoprotease family signature. 95 115 - T 23-04-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 BUMPUSDA_RS00295 9ed115105b349f679cc9f74454c0dccb 334 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 3.9E-110 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 BUMPUSDA_RS00295 9ed115105b349f679cc9f74454c0dccb 334 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 8.5E-121 T 23-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 BUMPUSDA_RS00295 9ed115105b349f679cc9f74454c0dccb 334 Pfam PF00814 Glycoprotease family 24 307 2.3E-94 T 23-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 BUMPUSDA_RS00295 9ed115105b349f679cc9f74454c0dccb 334 Gene3D G3DSA:3.30.420.40 1 157 7.9E-40 T 23-04-2016 BUMPUSDA_RS01735 0fe55e2b36051935b7af4e94c88bd60b 251 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 119 3.5E-22 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G BUMPUSDA_RS01735 0fe55e2b36051935b7af4e94c88bd60b 251 Pfam PF00460 Flagella basal body rod protein 7 35 3.0E-6 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BUMPUSDA_RS01735 0fe55e2b36051935b7af4e94c88bd60b 251 SUPERFAMILY SSF117143 75 208 8.5E-10 T 23-04-2016 BUMPUSDA_RS01735 0fe55e2b36051935b7af4e94c88bd60b 251 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 168 246 2.1E-18 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BUMPUSDA_RS01735 0fe55e2b36051935b7af4e94c88bd60b 251 PANTHER PTHR30435 1 249 1.4E-48 T 23-04-2016 BUMPUSDA_RS01735 0fe55e2b36051935b7af4e94c88bd60b 251 PANTHER PTHR30435:SF18 1 249 1.4E-48 T 23-04-2016 BUMPUSDA_RS00320 13d99ea944bffbfb0038598ddda429df 167 PANTHER PTHR30175 19 116 5.1E-39 T 23-04-2016 BUMPUSDA_RS00320 13d99ea944bffbfb0038598ddda429df 167 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 20 144 1.8E-43 T 23-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- BUMPUSDA_RS00320 13d99ea944bffbfb0038598ddda429df 167 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 21 141 6.4E-43 T 23-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- BUMPUSDA_RS00320 13d99ea944bffbfb0038598ddda429df 167 SUPERFAMILY SSF51261 10 165 7.15E-51 T 23-04-2016 IPR011055 Duplicated hybrid motif BUMPUSDA_RS00320 13d99ea944bffbfb0038598ddda429df 167 Gene3D G3DSA:2.70.70.10 11 165 4.2E-54 T 23-04-2016 BUMPUSDA_RS00095 b73226951d5d85e3bb745b96c9d10b67 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 3.0E-258 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 BUMPUSDA_RS00095 b73226951d5d85e3bb745b96c9d10b67 548 SUPERFAMILY SSF54849 137 203 3.89E-24 T 23-04-2016 BUMPUSDA_RS00095 b73226951d5d85e3bb745b96c9d10b67 548 Gene3D G3DSA:1.10.560.10 3 201 3.5E-46 T 23-04-2016 IPR027413 GroEL-like equatorial domain BUMPUSDA_RS00095 b73226951d5d85e3bb745b96c9d10b67 548 SUPERFAMILY SSF52029 185 376 1.5E-80 T 23-04-2016 IPR027409 GroEL-like apical domain BUMPUSDA_RS00095 b73226951d5d85e3bb745b96c9d10b67 548 PRINTS PR00298 60kDa chaperonin signature 27 53 2.2E-73 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 BUMPUSDA_RS00095 b73226951d5d85e3bb745b96c9d10b67 548 PRINTS PR00298 60kDa chaperonin signature 268 291 2.2E-73 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 BUMPUSDA_RS00095 b73226951d5d85e3bb745b96c9d10b67 548 PRINTS PR00298 60kDa chaperonin signature 350 375 2.2E-73 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 BUMPUSDA_RS00095 b73226951d5d85e3bb745b96c9d10b67 548 PRINTS PR00298 60kDa chaperonin signature 83 110 2.2E-73 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 BUMPUSDA_RS00095 b73226951d5d85e3bb745b96c9d10b67 548 PRINTS PR00298 60kDa chaperonin signature 398 419 2.2E-73 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 BUMPUSDA_RS00095 b73226951d5d85e3bb745b96c9d10b67 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 23-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 BUMPUSDA_RS00095 b73226951d5d85e3bb745b96c9d10b67 548 SUPERFAMILY SSF48592 406 521 8.4E-76 T 23-04-2016 BUMPUSDA_RS00095 b73226951d5d85e3bb745b96c9d10b67 548 SUPERFAMILY SSF48592 7 134 8.4E-76 T 23-04-2016 BUMPUSDA_RS00095 b73226951d5d85e3bb745b96c9d10b67 548 PANTHER PTHR11353 2 548 6.6E-246 T 23-04-2016 BUMPUSDA_RS00095 b73226951d5d85e3bb745b96c9d10b67 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 2.0E-95 T 23-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 BUMPUSDA_RS00095 b73226951d5d85e3bb745b96c9d10b67 548 Gene3D G3DSA:3.50.7.10 202 369 3.5E-91 T 23-04-2016 IPR027409 GroEL-like apical domain BUMPUSDA_RS00095 b73226951d5d85e3bb745b96c9d10b67 548 Gene3D G3DSA:1.10.560.10 370 518 8.9E-40 T 23-04-2016 IPR027413 GroEL-like equatorial domain BUMPUSDA_RS00095 b73226951d5d85e3bb745b96c9d10b67 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 547 41.027 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 BUMPUSDA_RS02970 e8553f1e6beaa0c8b353f1c2c360e490 253 SUPERFAMILY SSF63380 3 103 6.09E-20 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 BUMPUSDA_RS02970 e8553f1e6beaa0c8b353f1c2c360e490 253 PANTHER PTHR19370 4 232 2.9E-73 T 23-04-2016 BUMPUSDA_RS02970 e8553f1e6beaa0c8b353f1c2c360e490 253 Gene3D G3DSA:2.40.30.10 3 97 4.4E-22 T 23-04-2016 BUMPUSDA_RS02970 e8553f1e6beaa0c8b353f1c2c360e490 253 PANTHER PTHR19370:SF98 4 232 2.9E-73 T 23-04-2016 BUMPUSDA_RS02970 e8553f1e6beaa0c8b353f1c2c360e490 253 Pfam PF00970 Oxidoreductase FAD-binding domain 23 96 1.2E-5 T 23-04-2016 IPR008333 Oxidoreductase, FAD-binding domain BUMPUSDA_RS02970 e8553f1e6beaa0c8b353f1c2c360e490 253 Pfam PF00175 Oxidoreductase NAD-binding domain 116 226 3.8E-17 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BUMPUSDA_RS02970 e8553f1e6beaa0c8b353f1c2c360e490 253 SUPERFAMILY SSF52343 108 253 2.1E-34 T 23-04-2016 BUMPUSDA_RS02970 e8553f1e6beaa0c8b353f1c2c360e490 253 Gene3D G3DSA:3.40.50.80 101 253 7.4E-41 T 23-04-2016 BUMPUSDA_RS01970 c8239fb197cf5ef0e5672c576146829c 340 Hamap MF_01454 GTPase Obg [obg]. 2 333 45.662 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 BUMPUSDA_RS01970 c8239fb197cf5ef0e5672c576146829c 340 PANTHER PTHR11702 1 338 6.5E-153 T 23-04-2016 BUMPUSDA_RS01970 c8239fb197cf5ef0e5672c576146829c 340 PANTHER PTHR11702:SF3 1 338 6.5E-153 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 BUMPUSDA_RS01970 c8239fb197cf5ef0e5672c576146829c 340 SUPERFAMILY SSF82051 2 157 2.88E-56 T 23-04-2016 IPR006169 GTP1/OBG domain GO:0005525 BUMPUSDA_RS01970 c8239fb197cf5ef0e5672c576146829c 340 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 23-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 BUMPUSDA_RS01970 c8239fb197cf5ef0e5672c576146829c 340 SUPERFAMILY SSF52540 152 334 7.94E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01970 c8239fb197cf5ef0e5672c576146829c 340 Pfam PF01018 GTP1/OBG 3 157 2.6E-59 T 23-04-2016 IPR006169 GTP1/OBG domain GO:0005525 BUMPUSDA_RS01970 c8239fb197cf5ef0e5672c576146829c 340 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 2.9E-33 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 BUMPUSDA_RS01970 c8239fb197cf5ef0e5672c576146829c 340 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 2.9E-33 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 BUMPUSDA_RS01970 c8239fb197cf5ef0e5672c576146829c 340 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 2.9E-33 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 BUMPUSDA_RS01970 c8239fb197cf5ef0e5672c576146829c 340 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 2.9E-33 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 BUMPUSDA_RS01970 c8239fb197cf5ef0e5672c576146829c 340 Gene3D G3DSA:2.70.210.12 2 154 1.6E-58 T 23-04-2016 IPR006169 GTP1/OBG domain GO:0005525 BUMPUSDA_RS01970 c8239fb197cf5ef0e5672c576146829c 340 PIRSF PIRSF002401 1 339 1.2E-133 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 BUMPUSDA_RS01970 c8239fb197cf5ef0e5672c576146829c 340 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 160 323 2.6E-14 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 BUMPUSDA_RS01970 c8239fb197cf5ef0e5672c576146829c 340 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 1.5E-140 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 BUMPUSDA_RS01970 c8239fb197cf5ef0e5672c576146829c 340 Gene3D G3DSA:3.40.50.300 155 338 1.1E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01970 c8239fb197cf5ef0e5672c576146829c 340 Pfam PF01926 50S ribosome-binding GTPase 162 284 8.3E-25 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 BUMPUSDA_RS03095 a3bd92d3431e783246a7426983ed9ee7 111 Gene3D G3DSA:3.10.20.30 1 101 2.2E-29 T 23-04-2016 IPR012675 Beta-grasp domain BUMPUSDA_RS03095 a3bd92d3431e783246a7426983ed9ee7 111 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 14 91 9.3E-14 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 BUMPUSDA_RS03095 a3bd92d3431e783246a7426983ed9ee7 111 SUPERFAMILY SSF54292 4 102 1.01E-27 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 BUMPUSDA_RS03095 a3bd92d3431e783246a7426983ed9ee7 111 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 1.7E-55 T 23-04-2016 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 BUMPUSDA_RS03095 a3bd92d3431e783246a7426983ed9ee7 111 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 23-04-2016 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 BUMPUSDA_RS03095 a3bd92d3431e783246a7426983ed9ee7 111 PRINTS PR00355 Adrenodoxin signature 42 52 9.7E-8 T 23-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 BUMPUSDA_RS03095 a3bd92d3431e783246a7426983ed9ee7 111 PRINTS PR00355 Adrenodoxin signature 83 91 9.7E-8 T 23-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 BUMPUSDA_RS03095 a3bd92d3431e783246a7426983ed9ee7 111 PRINTS PR00355 Adrenodoxin signature 60 74 9.7E-8 T 23-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 BUMPUSDA_RS03095 a3bd92d3431e783246a7426983ed9ee7 111 PANTHER PTHR23426 7 111 4.1E-31 T 23-04-2016 BUMPUSDA_RS01585 7c214f18266caef44e147c212b3dbb6c 361 PIRSF PIRSF000525 1 361 6.2E-142 T 23-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 BUMPUSDA_RS01585 7c214f18266caef44e147c212b3dbb6c 361 Gene3D G3DSA:3.40.640.10 17 257 1.2E-94 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 BUMPUSDA_RS01585 7c214f18266caef44e147c212b3dbb6c 361 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 188 207 - T 23-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BUMPUSDA_RS01585 7c214f18266caef44e147c212b3dbb6c 361 PANTHER PTHR21152:SF1 4 361 2.2E-161 T 23-04-2016 BUMPUSDA_RS01585 7c214f18266caef44e147c212b3dbb6c 361 SUPERFAMILY SSF53383 1 359 2.83E-105 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase BUMPUSDA_RS01585 7c214f18266caef44e147c212b3dbb6c 361 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 360 1.4E-153 T 23-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 BUMPUSDA_RS01585 7c214f18266caef44e147c212b3dbb6c 361 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 360 48.652 T 23-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 BUMPUSDA_RS01585 7c214f18266caef44e147c212b3dbb6c 361 Pfam PF00266 Aminotransferase class-V 4 349 7.0E-52 T 23-04-2016 IPR000192 Aminotransferase class V domain BUMPUSDA_RS01585 7c214f18266caef44e147c212b3dbb6c 361 Gene3D G3DSA:3.90.1150.10 259 359 3.2E-38 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 BUMPUSDA_RS01585 7c214f18266caef44e147c212b3dbb6c 361 PANTHER PTHR21152 4 361 2.2E-161 T 23-04-2016 BUMPUSDA_RS01385 875096efcf76a7382a3a202a2205caf7 135 PANTHER PTHR11049:SF5 1 132 1.7E-57 T 23-04-2016 BUMPUSDA_RS01385 875096efcf76a7382a3a202a2205caf7 135 Pfam PF03061 Thioesterase superfamily 26 98 1.6E-19 T 23-04-2016 IPR006683 Thioesterase domain BUMPUSDA_RS01385 875096efcf76a7382a3a202a2205caf7 135 Gene3D G3DSA:3.10.129.10 12 131 1.2E-35 T 23-04-2016 IPR029069 HotDog domain BUMPUSDA_RS01385 875096efcf76a7382a3a202a2205caf7 135 PANTHER PTHR11049 1 132 1.7E-57 T 23-04-2016 BUMPUSDA_RS01385 875096efcf76a7382a3a202a2205caf7 135 SUPERFAMILY SSF54637 10 129 2.28E-33 T 23-04-2016 IPR029069 HotDog domain BUMPUSDA_RS02850 4b479753c1ff5d248b679cc6acecb8c0 214 PANTHER PTHR19278:SF36 2 213 2.3E-77 T 23-04-2016 BUMPUSDA_RS02850 4b479753c1ff5d248b679cc6acecb8c0 214 Gene3D G3DSA:3.40.50.2020 5 212 2.4E-63 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like BUMPUSDA_RS02850 4b479753c1ff5d248b679cc6acecb8c0 214 PANTHER PTHR19278 2 213 2.3E-77 T 23-04-2016 BUMPUSDA_RS02850 4b479753c1ff5d248b679cc6acecb8c0 214 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 12 187 4.7E-52 T 23-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 BUMPUSDA_RS02850 4b479753c1ff5d248b679cc6acecb8c0 214 SUPERFAMILY SSF53271 3 212 2.23E-43 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like BUMPUSDA_RS02850 4b479753c1ff5d248b679cc6acecb8c0 214 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 214 25.119 T 23-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 BUMPUSDA_RS02850 4b479753c1ff5d248b679cc6acecb8c0 214 Pfam PF00156 Phosphoribosyl transferase domain 52 171 2.8E-14 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 BUMPUSDA_RS02210 cc475db1f50e668b75d3a00e2a6e50ec 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 5 184 3.0E-73 T 23-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 BUMPUSDA_RS02210 cc475db1f50e668b75d3a00e2a6e50ec 207 PANTHER PTHR23117:SF13 1 204 7.7E-86 T 23-04-2016 BUMPUSDA_RS02210 cc475db1f50e668b75d3a00e2a6e50ec 207 Gene3D G3DSA:3.30.63.10 35 87 5.0E-25 T 23-04-2016 BUMPUSDA_RS02210 cc475db1f50e668b75d3a00e2a6e50ec 207 Gene3D G3DSA:3.40.50.300 88 203 2.2E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02210 cc475db1f50e668b75d3a00e2a6e50ec 207 Gene3D G3DSA:3.40.50.300 1 26 2.2E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02210 cc475db1f50e668b75d3a00e2a6e50ec 207 Pfam PF00625 Guanylate kinase 7 185 1.2E-58 T 23-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit BUMPUSDA_RS02210 cc475db1f50e668b75d3a00e2a6e50ec 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 36.16 T 23-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 BUMPUSDA_RS02210 cc475db1f50e668b75d3a00e2a6e50ec 207 SMART SM00072 3 187 6.3E-61 T 23-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit BUMPUSDA_RS02210 cc475db1f50e668b75d3a00e2a6e50ec 207 SUPERFAMILY SSF52540 3 187 7.77E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02210 cc475db1f50e668b75d3a00e2a6e50ec 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 23-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 BUMPUSDA_RS02210 cc475db1f50e668b75d3a00e2a6e50ec 207 PANTHER PTHR23117 1 204 7.7E-86 T 23-04-2016 BUMPUSDA_RS01840 549d196516980d9fc07c3a4d9f79d261 337 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 293 313 - T 23-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 BUMPUSDA_RS01840 549d196516980d9fc07c3a4d9f79d261 337 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 337 45.034 T 23-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 BUMPUSDA_RS01840 549d196516980d9fc07c3a4d9f79d261 337 PANTHER PTHR11938:SF47 1 337 2.4E-68 T 23-04-2016 BUMPUSDA_RS01840 549d196516980d9fc07c3a4d9f79d261 337 PANTHER PTHR11938 1 337 2.4E-68 T 23-04-2016 BUMPUSDA_RS01840 549d196516980d9fc07c3a4d9f79d261 337 Pfam PF01180 Dihydroorotate dehydrogenase 47 337 2.2E-78 T 23-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 BUMPUSDA_RS01840 549d196516980d9fc07c3a4d9f79d261 337 PIRSF PIRSF000164 17 337 2.2E-87 T 23-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 BUMPUSDA_RS01840 549d196516980d9fc07c3a4d9f79d261 337 Gene3D G3DSA:3.20.20.70 1 337 1.9E-107 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 BUMPUSDA_RS01840 549d196516980d9fc07c3a4d9f79d261 337 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 337 9.9E-126 T 23-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 BUMPUSDA_RS01840 549d196516980d9fc07c3a4d9f79d261 337 SUPERFAMILY SSF51395 1 337 5.0E-86 T 23-04-2016 BUMPUSDA_RS01840 549d196516980d9fc07c3a4d9f79d261 337 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 81 100 - T 23-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 BUMPUSDA_RS01720 8f94ca153e56459eda0a7f7ee603c2a7 136 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 89 133 9.9E-12 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BUMPUSDA_RS01720 8f94ca153e56459eda0a7f7ee603c2a7 136 Pfam PF00460 Flagella basal body rod protein 9 34 2.4E-9 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BUMPUSDA_RS01720 8f94ca153e56459eda0a7f7ee603c2a7 136 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 5 134 4.4E-42 T 23-04-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 BUMPUSDA_RS01720 8f94ca153e56459eda0a7f7ee603c2a7 136 PANTHER PTHR30435:SF2 1 136 2.7E-50 T 23-04-2016 BUMPUSDA_RS01720 8f94ca153e56459eda0a7f7ee603c2a7 136 PANTHER PTHR30435 1 136 2.7E-50 T 23-04-2016 BUMPUSDA_RS01720 8f94ca153e56459eda0a7f7ee603c2a7 136 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 23-04-2016 IPR019776 Flagellar basal body rod protein, conserved site BUMPUSDA_RS00065 81e1bf953c71aa910239da42955d6d11 47 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 4.8E-24 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS00065 81e1bf953c71aa910239da42955d6d11 47 PANTHER PTHR14503 1 46 6.3E-19 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS00065 81e1bf953c71aa910239da42955d6d11 47 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 39 6.0E-15 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS00065 81e1bf953c71aa910239da42955d6d11 47 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 14.602 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS00065 81e1bf953c71aa910239da42955d6d11 47 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 23-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS00065 81e1bf953c71aa910239da42955d6d11 47 Pfam PF00468 Ribosomal protein L34 1 44 5.4E-21 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS00905 dafea2828a25296f38d84ac900e44f1e 760 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 141 219 4.3E-11 T 23-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 BUMPUSDA_RS00905 dafea2828a25296f38d84ac900e44f1e 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 1.3E-36 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BUMPUSDA_RS00905 dafea2828a25296f38d84ac900e44f1e 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 1.3E-36 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BUMPUSDA_RS00905 dafea2828a25296f38d84ac900e44f1e 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 1.3E-36 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BUMPUSDA_RS00905 dafea2828a25296f38d84ac900e44f1e 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 1.3E-36 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BUMPUSDA_RS00905 dafea2828a25296f38d84ac900e44f1e 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 1.3E-36 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BUMPUSDA_RS00905 dafea2828a25296f38d84ac900e44f1e 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 1.3E-36 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BUMPUSDA_RS00905 dafea2828a25296f38d84ac900e44f1e 760 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BUMPUSDA_RS00905 dafea2828a25296f38d84ac900e44f1e 760 PANTHER PTHR11573 6 751 0.0 T 23-04-2016 BUMPUSDA_RS00905 dafea2828a25296f38d84ac900e44f1e 760 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 1.8E-177 T 23-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 BUMPUSDA_RS00905 dafea2828a25296f38d84ac900e44f1e 760 PANTHER PTHR11573:SF17 6 751 0.0 T 23-04-2016 BUMPUSDA_RS00905 dafea2828a25296f38d84ac900e44f1e 760 SUPERFAMILY SSF51998 222 739 8.55E-163 T 23-04-2016 BUMPUSDA_RS00905 dafea2828a25296f38d84ac900e44f1e 760 SUPERFAMILY SSF48168 10 221 4.05E-69 T 23-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 BUMPUSDA_RS00905 dafea2828a25296f38d84ac900e44f1e 760 Gene3D G3DSA:3.20.70.20 398 559 2.2E-40 T 23-04-2016 BUMPUSDA_RS00905 dafea2828a25296f38d84ac900e44f1e 760 Gene3D G3DSA:3.20.70.20 610 697 2.2E-40 T 23-04-2016 BUMPUSDA_RS00905 dafea2828a25296f38d84ac900e44f1e 760 Gene3D G3DSA:3.20.70.20 187 344 2.2E-40 T 23-04-2016 BUMPUSDA_RS00905 dafea2828a25296f38d84ac900e44f1e 760 Pfam PF03477 ATP cone domain 6 92 8.1E-15 T 23-04-2016 IPR005144 ATP-cone domain BUMPUSDA_RS00905 dafea2828a25296f38d84ac900e44f1e 760 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 3.4E-116 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BUMPUSDA_RS02250 f378fb8ae810f4985f09dc1758c1a9ab 151 PANTHER PTHR22881 1 148 1.6E-39 T 23-04-2016 BUMPUSDA_RS02250 f378fb8ae810f4985f09dc1758c1a9ab 151 Pfam PF02130 Uncharacterized protein family UPF0054 19 140 2.4E-34 T 23-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 BUMPUSDA_RS02250 f378fb8ae810f4985f09dc1758c1a9ab 151 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 112 122 - T 23-04-2016 IPR020549 Endoribonuclease YbeY, conserved site BUMPUSDA_RS02250 f378fb8ae810f4985f09dc1758c1a9ab 151 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 39 142 4.2E-34 T 23-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 BUMPUSDA_RS02250 f378fb8ae810f4985f09dc1758c1a9ab 151 SUPERFAMILY SSF55486 3 148 6.35E-41 T 23-04-2016 BUMPUSDA_RS02250 f378fb8ae810f4985f09dc1758c1a9ab 151 Gene3D G3DSA:3.40.390.30 18 149 1.6E-39 T 23-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 BUMPUSDA_RS02250 f378fb8ae810f4985f09dc1758c1a9ab 151 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 5 146 21.234 T 23-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 BUMPUSDA_RS01015 6341e720455fc35df71c14ce3536c2b7 873 Pfam PF07516 SecA Wing and Scaffold domain 617 829 9.9E-62 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 BUMPUSDA_RS01015 6341e720455fc35df71c14ce3536c2b7 873 SUPERFAMILY SSF52540 416 618 6.15E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01015 6341e720455fc35df71c14ce3536c2b7 873 PRINTS PR00906 SecA protein signature 63 87 1.6E-72 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BUMPUSDA_RS01015 6341e720455fc35df71c14ce3536c2b7 873 PRINTS PR00906 SecA protein signature 170 190 1.6E-72 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BUMPUSDA_RS01015 6341e720455fc35df71c14ce3536c2b7 873 PRINTS PR00906 SecA protein signature 117 127 1.6E-72 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BUMPUSDA_RS01015 6341e720455fc35df71c14ce3536c2b7 873 PRINTS PR00906 SecA protein signature 413 426 1.6E-72 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BUMPUSDA_RS01015 6341e720455fc35df71c14ce3536c2b7 873 PRINTS PR00906 SecA protein signature 101 115 1.6E-72 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BUMPUSDA_RS01015 6341e720455fc35df71c14ce3536c2b7 873 PRINTS PR00906 SecA protein signature 376 393 1.6E-72 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BUMPUSDA_RS01015 6341e720455fc35df71c14ce3536c2b7 873 PRINTS PR00906 SecA protein signature 339 361 1.6E-72 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BUMPUSDA_RS01015 6341e720455fc35df71c14ce3536c2b7 873 Gene3D G3DSA:3.40.50.300 369 416 3.3E-118 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01015 6341e720455fc35df71c14ce3536c2b7 873 Gene3D G3DSA:3.40.50.300 2 228 3.3E-118 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01015 6341e720455fc35df71c14ce3536c2b7 873 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 816 0.0 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BUMPUSDA_RS01015 6341e720455fc35df71c14ce3536c2b7 873 SUPERFAMILY SSF81767 227 368 5.1E-41 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 BUMPUSDA_RS01015 6341e720455fc35df71c14ce3536c2b7 873 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 19.344 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BUMPUSDA_RS01015 6341e720455fc35df71c14ce3536c2b7 873 ProSitePatterns PS01312 SecA family signature. 500 515 - T 23-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 BUMPUSDA_RS01015 6341e720455fc35df71c14ce3536c2b7 873 PANTHER PTHR30612 1 520 0.0 T 23-04-2016 BUMPUSDA_RS01015 6341e720455fc35df71c14ce3536c2b7 873 PANTHER PTHR30612 550 873 0.0 T 23-04-2016 BUMPUSDA_RS01015 6341e720455fc35df71c14ce3536c2b7 873 Gene3D G3DSA:1.10.3060.10 648 830 7.9E-50 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 BUMPUSDA_RS01015 6341e720455fc35df71c14ce3536c2b7 873 Pfam PF02810 SEC-C motif 854 871 1.2E-7 T 23-04-2016 IPR004027 SEC-C motif BUMPUSDA_RS01015 6341e720455fc35df71c14ce3536c2b7 873 Gene3D G3DSA:3.90.1440.10 230 368 2.6E-42 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 BUMPUSDA_RS01015 6341e720455fc35df71c14ce3536c2b7 873 SMART SM00957 6 402 4.2E-283 T 23-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 BUMPUSDA_RS01015 6341e720455fc35df71c14ce3536c2b7 873 SUPERFAMILY SSF52540 368 415 5.32E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01015 6341e720455fc35df71c14ce3536c2b7 873 SUPERFAMILY SSF52540 4 228 5.32E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01015 6341e720455fc35df71c14ce3536c2b7 873 SMART SM00958 228 358 1.8E-71 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 BUMPUSDA_RS01015 6341e720455fc35df71c14ce3536c2b7 873 Gene3D G3DSA:3.40.50.300 417 619 6.1E-86 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01015 6341e720455fc35df71c14ce3536c2b7 873 SUPERFAMILY SSF81886 620 862 2.62E-71 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 BUMPUSDA_RS01015 6341e720455fc35df71c14ce3536c2b7 873 Pfam PF01043 SecA preprotein cross-linking domain 232 358 4.2E-36 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 BUMPUSDA_RS01015 6341e720455fc35df71c14ce3536c2b7 873 Pfam PF07517 SecA DEAD-like domain 7 402 9.0E-127 T 23-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 BUMPUSDA_RS00525 516d5d374771f8c6a0487c16ae7abacc 258 Gene3D G3DSA:3.20.20.70 4 256 9.5E-81 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 BUMPUSDA_RS00525 516d5d374771f8c6a0487c16ae7abacc 258 SUPERFAMILY SSF51366 1 256 9.42E-68 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 BUMPUSDA_RS00525 516d5d374771f8c6a0487c16ae7abacc 258 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 5.8E-104 T 23-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 BUMPUSDA_RS00525 516d5d374771f8c6a0487c16ae7abacc 258 PANTHER PTHR21235 1 258 3.4E-104 T 23-04-2016 BUMPUSDA_RS00525 516d5d374771f8c6a0487c16ae7abacc 258 Pfam PF00977 Histidine biosynthesis protein 5 238 5.6E-73 T 23-04-2016 IPR006062 Histidine biosynthesis GO:0000105 BUMPUSDA_RS00525 516d5d374771f8c6a0487c16ae7abacc 258 PANTHER PTHR21235:SF2 1 258 3.4E-104 T 23-04-2016 BUMPUSDA_RS00525 516d5d374771f8c6a0487c16ae7abacc 258 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 41.415 T 23-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 BUMPUSDA_RS02155 449e07d8e2d7f28db2f19ab20803a428 473 Gene3D G3DSA:3.40.50.300 14 231 4.8E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02155 449e07d8e2d7f28db2f19ab20803a428 473 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 27 207 2.1E-13 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 BUMPUSDA_RS02155 449e07d8e2d7f28db2f19ab20803a428 473 SUPERFAMILY SSF50447 236 323 3.09E-20 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain BUMPUSDA_RS02155 449e07d8e2d7f28db2f19ab20803a428 473 SUPERFAMILY SSF52540 15 230 4.18E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02155 449e07d8e2d7f28db2f19ab20803a428 473 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 13 470 49.974 T 23-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 BUMPUSDA_RS02155 449e07d8e2d7f28db2f19ab20803a428 473 Gene3D G3DSA:2.40.30.10 237 338 2.0E-16 T 23-04-2016 BUMPUSDA_RS02155 449e07d8e2d7f28db2f19ab20803a428 473 Pfam PF00009 Elongation factor Tu GTP binding domain 21 224 2.3E-41 T 23-04-2016 BUMPUSDA_RS02155 449e07d8e2d7f28db2f19ab20803a428 473 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 22 428 2.9E-196 T 23-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 BUMPUSDA_RS02155 449e07d8e2d7f28db2f19ab20803a428 473 PANTHER PTHR23115 70 316 1.0E-60 T 23-04-2016 BUMPUSDA_RS02155 449e07d8e2d7f28db2f19ab20803a428 473 PANTHER PTHR23115 26 48 1.0E-60 T 23-04-2016 BUMPUSDA_RS02155 449e07d8e2d7f28db2f19ab20803a428 473 SUPERFAMILY SSF50465 329 429 1.39E-25 T 23-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal BUMPUSDA_RS02155 449e07d8e2d7f28db2f19ab20803a428 473 PRINTS PR00315 GTP-binding elongation factor signature 23 36 3.3E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BUMPUSDA_RS02155 449e07d8e2d7f28db2f19ab20803a428 473 PRINTS PR00315 GTP-binding elongation factor signature 104 114 3.3E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BUMPUSDA_RS02155 449e07d8e2d7f28db2f19ab20803a428 473 PRINTS PR00315 GTP-binding elongation factor signature 84 92 3.3E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BUMPUSDA_RS02155 449e07d8e2d7f28db2f19ab20803a428 473 PRINTS PR00315 GTP-binding elongation factor signature 120 131 3.3E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BUMPUSDA_RS02155 449e07d8e2d7f28db2f19ab20803a428 473 PRINTS PR00315 GTP-binding elongation factor signature 157 166 3.3E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BUMPUSDA_RS02155 449e07d8e2d7f28db2f19ab20803a428 473 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 77 92 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site BUMPUSDA_RS02710 cb3d29a4101f61c582a32fb69cbbb951 128 PANTHER PTHR34874:SF1 1 128 1.4E-45 T 23-04-2016 BUMPUSDA_RS02710 cb3d29a4101f61c582a32fb69cbbb951 128 PANTHER PTHR34874 1 128 1.4E-45 T 23-04-2016 BUMPUSDA_RS02710 cb3d29a4101f61c582a32fb69cbbb951 128 Hamap MF_00390 Sulfurtransferase TusD [tusD]. 1 128 38.745 T 23-04-2016 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 BUMPUSDA_RS02710 cb3d29a4101f61c582a32fb69cbbb951 128 Pfam PF02635 DsrE/DsrF-like family 1 128 9.9E-31 T 23-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein BUMPUSDA_RS02710 cb3d29a4101f61c582a32fb69cbbb951 128 Gene3D G3DSA:3.40.1260.10 1 128 5.4E-25 T 23-04-2016 IPR027396 DsrEFH-like BUMPUSDA_RS02710 cb3d29a4101f61c582a32fb69cbbb951 128 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 2 128 3.8E-51 T 23-04-2016 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 BUMPUSDA_RS02710 cb3d29a4101f61c582a32fb69cbbb951 128 SUPERFAMILY SSF75169 1 128 6.56E-36 T 23-04-2016 IPR027396 DsrEFH-like BUMPUSDA_RS01035 9b39f2b61c1e6ba8769fb0c98fb7a824 888 PANTHER PTHR11624:SF67 480 535 0.0 T 23-04-2016 BUMPUSDA_RS01035 9b39f2b61c1e6ba8769fb0c98fb7a824 888 PANTHER PTHR11624:SF67 363 452 0.0 T 23-04-2016 BUMPUSDA_RS01035 9b39f2b61c1e6ba8769fb0c98fb7a824 888 PANTHER PTHR11624:SF67 553 769 0.0 T 23-04-2016 BUMPUSDA_RS01035 9b39f2b61c1e6ba8769fb0c98fb7a824 888 PANTHER PTHR11624:SF67 788 870 0.0 T 23-04-2016 BUMPUSDA_RS01035 9b39f2b61c1e6ba8769fb0c98fb7a824 888 PANTHER PTHR11624:SF67 75 294 0.0 T 23-04-2016 BUMPUSDA_RS01035 9b39f2b61c1e6ba8769fb0c98fb7a824 888 Gene3D G3DSA:3.40.50.920 708 886 6.2E-65 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 BUMPUSDA_RS01035 9b39f2b61c1e6ba8769fb0c98fb7a824 888 PIRSF PIRSF000156 1 888 0.0 T 23-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 BUMPUSDA_RS01035 9b39f2b61c1e6ba8769fb0c98fb7a824 888 SUPERFAMILY SSF52518 58 468 4.96E-139 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold BUMPUSDA_RS01035 9b39f2b61c1e6ba8769fb0c98fb7a824 888 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 361 408 1.7E-4 T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 BUMPUSDA_RS01035 9b39f2b61c1e6ba8769fb0c98fb7a824 888 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 105 294 5.6E-10 T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 BUMPUSDA_RS01035 9b39f2b61c1e6ba8769fb0c98fb7a824 888 Gene3D G3DSA:3.40.50.970 58 467 2.4E-147 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold BUMPUSDA_RS01035 9b39f2b61c1e6ba8769fb0c98fb7a824 888 SUPERFAMILY SSF52518 474 701 2.45E-94 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold BUMPUSDA_RS01035 9b39f2b61c1e6ba8769fb0c98fb7a824 888 SUPERFAMILY SSF52922 702 886 2.17E-53 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 BUMPUSDA_RS01035 9b39f2b61c1e6ba8769fb0c98fb7a824 888 PANTHER PTHR11624 480 535 0.0 T 23-04-2016 IPR033247 Transketolase family BUMPUSDA_RS01035 9b39f2b61c1e6ba8769fb0c98fb7a824 888 PANTHER PTHR11624 363 452 0.0 T 23-04-2016 IPR033247 Transketolase family BUMPUSDA_RS01035 9b39f2b61c1e6ba8769fb0c98fb7a824 888 PANTHER PTHR11624 553 769 0.0 T 23-04-2016 IPR033247 Transketolase family BUMPUSDA_RS01035 9b39f2b61c1e6ba8769fb0c98fb7a824 888 PANTHER PTHR11624 788 870 0.0 T 23-04-2016 IPR033247 Transketolase family BUMPUSDA_RS01035 9b39f2b61c1e6ba8769fb0c98fb7a824 888 PANTHER PTHR11624 75 294 0.0 T 23-04-2016 IPR033247 Transketolase family BUMPUSDA_RS01035 9b39f2b61c1e6ba8769fb0c98fb7a824 888 Gene3D G3DSA:3.40.50.970 474 705 1.2E-114 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold BUMPUSDA_RS01035 9b39f2b61c1e6ba8769fb0c98fb7a824 888 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 6 887 0.0 T 23-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 BUMPUSDA_RS01515 eeb49d7c99beb5b9fdf8df14c2190bc8 169 PANTHER PTHR19384 141 164 3.2E-66 T 23-04-2016 BUMPUSDA_RS01515 eeb49d7c99beb5b9fdf8df14c2190bc8 169 PANTHER PTHR19384 1 120 3.2E-66 T 23-04-2016 BUMPUSDA_RS01515 eeb49d7c99beb5b9fdf8df14c2190bc8 169 TIGRFAM TIGR01752 flav_long: flavodoxin 3 168 2.5E-66 T 23-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 BUMPUSDA_RS01515 eeb49d7c99beb5b9fdf8df14c2190bc8 169 PANTHER PTHR19384:SF77 141 164 3.2E-66 T 23-04-2016 BUMPUSDA_RS01515 eeb49d7c99beb5b9fdf8df14c2190bc8 169 PANTHER PTHR19384:SF77 1 120 3.2E-66 T 23-04-2016 BUMPUSDA_RS01515 eeb49d7c99beb5b9fdf8df14c2190bc8 169 PIRSF PIRSF038996 1 169 1.6E-65 T 23-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 BUMPUSDA_RS01515 eeb49d7c99beb5b9fdf8df14c2190bc8 169 Pfam PF00258 Flavodoxin 6 160 2.0E-28 T 23-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 BUMPUSDA_RS01515 eeb49d7c99beb5b9fdf8df14c2190bc8 169 Gene3D G3DSA:3.40.50.360 1 168 8.9E-59 T 23-04-2016 IPR029039 Flavoprotein-like domain BUMPUSDA_RS01515 eeb49d7c99beb5b9fdf8df14c2190bc8 169 SUPERFAMILY SSF52218 2 167 8.67E-51 T 23-04-2016 IPR029039 Flavoprotein-like domain BUMPUSDA_RS01515 eeb49d7c99beb5b9fdf8df14c2190bc8 169 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 23-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 BUMPUSDA_RS00435 81b93122b8cebd28f9b37a2ba8ab726c 77 SUPERFAMILY SSF143800 2 74 2.16E-25 T 23-04-2016 BUMPUSDA_RS00435 81b93122b8cebd28f9b37a2ba8ab726c 77 Gene3D G3DSA:2.30.170.40 2 75 4.3E-30 T 23-04-2016 BUMPUSDA_RS00435 81b93122b8cebd28f9b37a2ba8ab726c 77 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 2.7E-24 T 23-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS00435 81b93122b8cebd28f9b37a2ba8ab726c 77 Pfam PF00830 Ribosomal L28 family 3 61 9.5E-22 T 23-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 BUMPUSDA_RS00435 81b93122b8cebd28f9b37a2ba8ab726c 77 PANTHER PTHR13528 1 70 1.9E-27 T 23-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 BUMPUSDA_RS00435 81b93122b8cebd28f9b37a2ba8ab726c 77 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 18.911 T 23-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS01365 d78c766e65c87e8830340ad29a7f24c1 317 PANTHER PTHR10949 32 307 5.0E-143 T 23-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 BUMPUSDA_RS01365 d78c766e65c87e8830340ad29a7f24c1 317 Gene3D G3DSA:3.20.20.70 51 308 1.4E-56 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 BUMPUSDA_RS01365 d78c766e65c87e8830340ad29a7f24c1 317 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 28 70 3.7E-9 T 23-04-2016 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 BUMPUSDA_RS01365 d78c766e65c87e8830340ad29a7f24c1 317 Pfam PF04055 Radical SAM superfamily 87 247 3.7E-10 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 BUMPUSDA_RS01365 d78c766e65c87e8830340ad29a7f24c1 317 SUPERFAMILY SSF102114 50 309 5.76E-55 T 23-04-2016 BUMPUSDA_RS01365 d78c766e65c87e8830340ad29a7f24c1 317 PIRSF PIRSF005963 3 316 1.2E-119 T 23-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 BUMPUSDA_RS01365 d78c766e65c87e8830340ad29a7f24c1 317 SMART SM00729 81 289 3.3E-6 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 BUMPUSDA_RS01365 d78c766e65c87e8830340ad29a7f24c1 317 TIGRFAM TIGR00510 lipA: lipoyl synthase 20 309 9.9E-124 T 23-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 BUMPUSDA_RS01365 d78c766e65c87e8830340ad29a7f24c1 317 Hamap MF_00206 Lipoyl synthase [lipA]. 1 317 127.961 T 23-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 BUMPUSDA_RS01695 981ea95a1849813d3a6906859f28539f 511 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 505 2.3E-133 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ BUMPUSDA_RS01695 981ea95a1849813d3a6906859f28539f 511 PANTHER PTHR11206:SF90 217 443 2.6E-70 T 23-04-2016 BUMPUSDA_RS01695 981ea95a1849813d3a6906859f28539f 511 PANTHER PTHR11206:SF90 70 82 2.6E-70 T 23-04-2016 BUMPUSDA_RS01695 981ea95a1849813d3a6906859f28539f 511 PANTHER PTHR11206:SF90 469 481 2.6E-70 T 23-04-2016 BUMPUSDA_RS01695 981ea95a1849813d3a6906859f28539f 511 PANTHER PTHR11206 217 443 2.6E-70 T 23-04-2016 BUMPUSDA_RS01695 981ea95a1849813d3a6906859f28539f 511 PANTHER PTHR11206 70 82 2.6E-70 T 23-04-2016 BUMPUSDA_RS01695 981ea95a1849813d3a6906859f28539f 511 PANTHER PTHR11206 469 481 2.6E-70 T 23-04-2016 BUMPUSDA_RS01695 981ea95a1849813d3a6906859f28539f 511 PRINTS PR01806 Virulence factor MviN signature 357 376 2.8E-77 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ BUMPUSDA_RS01695 981ea95a1849813d3a6906859f28539f 511 PRINTS PR01806 Virulence factor MviN signature 259 285 2.8E-77 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ BUMPUSDA_RS01695 981ea95a1849813d3a6906859f28539f 511 PRINTS PR01806 Virulence factor MviN signature 33 52 2.8E-77 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ BUMPUSDA_RS01695 981ea95a1849813d3a6906859f28539f 511 PRINTS PR01806 Virulence factor MviN signature 52 68 2.8E-77 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ BUMPUSDA_RS01695 981ea95a1849813d3a6906859f28539f 511 PRINTS PR01806 Virulence factor MviN signature 133 157 2.8E-77 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ BUMPUSDA_RS01695 981ea95a1849813d3a6906859f28539f 511 PRINTS PR01806 Virulence factor MviN signature 409 426 2.8E-77 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ BUMPUSDA_RS01695 981ea95a1849813d3a6906859f28539f 511 PRINTS PR01806 Virulence factor MviN signature 157 178 2.8E-77 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ BUMPUSDA_RS01695 981ea95a1849813d3a6906859f28539f 511 Pfam PF03023 MviN-like protein 28 476 2.0E-126 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ BUMPUSDA_RS01695 981ea95a1849813d3a6906859f28539f 511 PIRSF PIRSF002869 1 510 5.3E-153 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ BUMPUSDA_RS01275 7b56e189d338f62d640d8544b0e8a2b3 184 SUPERFAMILY SSF58014 29 118 4.45E-9 T 23-04-2016 BUMPUSDA_RS01275 7b56e189d338f62d640d8544b0e8a2b3 184 Gene3D G3DSA:2.30.22.10 125 183 6.4E-21 T 23-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 BUMPUSDA_RS01275 7b56e189d338f62d640d8544b0e8a2b3 184 Hamap MF_01151 Protein GrpE [grpE]. 3 181 15.595 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 BUMPUSDA_RS01275 7b56e189d338f62d640d8544b0e8a2b3 184 PANTHER PTHR21237 10 184 1.3E-26 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 BUMPUSDA_RS01275 7b56e189d338f62d640d8544b0e8a2b3 184 SUPERFAMILY SSF51064 125 182 5.1E-16 T 23-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 BUMPUSDA_RS01275 7b56e189d338f62d640d8544b0e8a2b3 184 Gene3D G3DSA:3.90.20.20 28 120 1.8E-8 T 23-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil BUMPUSDA_RS01275 7b56e189d338f62d640d8544b0e8a2b3 184 Pfam PF01025 GrpE 10 181 1.4E-35 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 BUMPUSDA_RS01275 7b56e189d338f62d640d8544b0e8a2b3 184 ProSitePatterns PS01071 grpE protein signature. 135 179 - T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 BUMPUSDA_RS01275 7b56e189d338f62d640d8544b0e8a2b3 184 PRINTS PR00773 GrpE protein signature 75 90 1.9E-8 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 BUMPUSDA_RS01275 7b56e189d338f62d640d8544b0e8a2b3 184 PRINTS PR00773 GrpE protein signature 159 178 1.9E-8 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 BUMPUSDA_RS01275 7b56e189d338f62d640d8544b0e8a2b3 184 PRINTS PR00773 GrpE protein signature 132 147 1.9E-8 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 BUMPUSDA_RS01700 5f60a535a3e1b0e90631f6fa7760df1f 349 Pfam PF01979 Amidohydrolase family 15 331 4.9E-27 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 BUMPUSDA_RS01700 5f60a535a3e1b0e90631f6fa7760df1f 349 ProSitePatterns PS00483 Dihydroorotase signature 2. 250 261 - T 23-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 BUMPUSDA_RS01700 5f60a535a3e1b0e90631f6fa7760df1f 349 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 8 348 2.0E-126 T 23-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 BUMPUSDA_RS01700 5f60a535a3e1b0e90631f6fa7760df1f 349 Gene3D G3DSA:3.20.20.140 5 348 2.8E-114 T 23-04-2016 BUMPUSDA_RS01700 5f60a535a3e1b0e90631f6fa7760df1f 349 Hamap MF_00219 Dihydroorotase [pyrC]. 6 348 43.976 T 23-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 BUMPUSDA_RS01700 5f60a535a3e1b0e90631f6fa7760df1f 349 PIRSF PIRSF001237 4 349 1.2E-133 T 23-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 BUMPUSDA_RS01700 5f60a535a3e1b0e90631f6fa7760df1f 349 SUPERFAMILY SSF51556 7 347 8.26E-128 T 23-04-2016 IPR032466 Metal-dependent hydrolase BUMPUSDA_RS01700 5f60a535a3e1b0e90631f6fa7760df1f 349 PANTHER PTHR11647 5 335 2.2E-125 T 23-04-2016 BUMPUSDA_RS01700 5f60a535a3e1b0e90631f6fa7760df1f 349 PANTHER PTHR11647:SF59 5 335 2.2E-125 T 23-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 BUMPUSDA_RS02480 3042a8a6c004570a54f96f9b51fa6ead 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 1.0E-78 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 BUMPUSDA_RS02480 3042a8a6c004570a54f96f9b51fa6ead 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 1.0E-78 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 BUMPUSDA_RS02480 3042a8a6c004570a54f96f9b51fa6ead 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 1.0E-78 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 BUMPUSDA_RS02480 3042a8a6c004570a54f96f9b51fa6ead 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 1.0E-78 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 BUMPUSDA_RS02480 3042a8a6c004570a54f96f9b51fa6ead 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 1.0E-78 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 BUMPUSDA_RS02480 3042a8a6c004570a54f96f9b51fa6ead 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 1.0E-78 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 BUMPUSDA_RS02480 3042a8a6c004570a54f96f9b51fa6ead 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 1.0E-78 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 BUMPUSDA_RS02480 3042a8a6c004570a54f96f9b51fa6ead 285 Gene3D G3DSA:3.40.50.720 141 264 2.9E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain BUMPUSDA_RS02480 3042a8a6c004570a54f96f9b51fa6ead 285 SUPERFAMILY SSF53223 3 122 1.82E-35 T 23-04-2016 BUMPUSDA_RS02480 3042a8a6c004570a54f96f9b51fa6ead 285 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 23-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 BUMPUSDA_RS02480 3042a8a6c004570a54f96f9b51fa6ead 285 Gene3D G3DSA:3.40.192.10 7 140 1.9E-43 T 23-04-2016 BUMPUSDA_RS02480 3042a8a6c004570a54f96f9b51fa6ead 285 PANTHER PTHR10025 1 284 2.9E-138 T 23-04-2016 BUMPUSDA_RS02480 3042a8a6c004570a54f96f9b51fa6ead 285 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 23-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 BUMPUSDA_RS02480 3042a8a6c004570a54f96f9b51fa6ead 285 SUPERFAMILY SSF51735 123 284 7.4E-46 T 23-04-2016 IPR016040 NAD(P)-binding domain BUMPUSDA_RS02480 3042a8a6c004570a54f96f9b51fa6ead 285 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 34.754 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 BUMPUSDA_RS02480 3042a8a6c004570a54f96f9b51fa6ead 285 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 7.2E-65 T 23-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 BUMPUSDA_RS02480 3042a8a6c004570a54f96f9b51fa6ead 285 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 5.8E-35 T 23-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 BUMPUSDA_RS00995 532b1dd2fd1e8d6cd2fa81f91660a399 263 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 39.189 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 BUMPUSDA_RS00995 532b1dd2fd1e8d6cd2fa81f91660a399 263 SUPERFAMILY SSF51621 4 263 1.36E-96 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 BUMPUSDA_RS00995 532b1dd2fd1e8d6cd2fa81f91660a399 263 Pfam PF02548 Ketopantoate hydroxymethyltransferase 4 258 1.9E-101 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 BUMPUSDA_RS00995 532b1dd2fd1e8d6cd2fa81f91660a399 263 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 3 263 2.2E-107 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 BUMPUSDA_RS00995 532b1dd2fd1e8d6cd2fa81f91660a399 263 PANTHER PTHR20881 1 263 4.0E-141 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 BUMPUSDA_RS00995 532b1dd2fd1e8d6cd2fa81f91660a399 263 PIRSF PIRSF000388 1 263 6.8E-96 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 BUMPUSDA_RS00995 532b1dd2fd1e8d6cd2fa81f91660a399 263 Gene3D G3DSA:3.20.20.60 2 263 5.7E-104 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 BUMPUSDA_RS00995 532b1dd2fd1e8d6cd2fa81f91660a399 263 PANTHER PTHR20881:SF3 1 263 4.0E-141 T 23-04-2016 BUMPUSDA_RS03120 7c4101f44a60a1b990fc9464653f5ac1 167 SMART SM01228 119 167 2.6E-5 T 23-04-2016 BUMPUSDA_RS03120 7c4101f44a60a1b990fc9464653f5ac1 167 PANTHER PTHR11806:SF0 1 164 1.7E-44 T 23-04-2016 BUMPUSDA_RS03120 7c4101f44a60a1b990fc9464653f5ac1 167 PANTHER PTHR11806 1 164 1.7E-44 T 23-04-2016 BUMPUSDA_RS03120 7c4101f44a60a1b990fc9464653f5ac1 167 Pfam PF13932 GidA associated domain 1 166 7.2E-38 T 23-04-2016 IPR026904 GidA associated domain 3 BUMPUSDA_RS02315 e2a54f08eb85e88384227a6dd3e6ebf7 609 Pfam PF13538 UvrD-like helicase C-terminal domain 535 579 4.8E-10 T 23-04-2016 IPR027785 UvrD-like helicase C-terminal domain BUMPUSDA_RS02315 e2a54f08eb85e88384227a6dd3e6ebf7 609 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 13 606 41.208 T 23-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 BUMPUSDA_RS02315 e2a54f08eb85e88384227a6dd3e6ebf7 609 SMART SM00382 163 319 0.0035 T 23-04-2016 IPR003593 AAA+ ATPase domain BUMPUSDA_RS02315 e2a54f08eb85e88384227a6dd3e6ebf7 609 PANTHER PTHR10887:SF284 108 314 3.4E-46 T 23-04-2016 BUMPUSDA_RS02315 e2a54f08eb85e88384227a6dd3e6ebf7 609 PANTHER PTHR10887:SF284 339 461 3.4E-46 T 23-04-2016 BUMPUSDA_RS02315 e2a54f08eb85e88384227a6dd3e6ebf7 609 PANTHER PTHR10887:SF284 535 579 3.4E-46 T 23-04-2016 BUMPUSDA_RS02315 e2a54f08eb85e88384227a6dd3e6ebf7 609 Gene3D G3DSA:3.40.50.300 350 369 2.0E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02315 e2a54f08eb85e88384227a6dd3e6ebf7 609 Gene3D G3DSA:3.40.50.300 113 317 2.0E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02315 e2a54f08eb85e88384227a6dd3e6ebf7 609 Gene3D G3DSA:3.40.50.300 370 401 1.3E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02315 e2a54f08eb85e88384227a6dd3e6ebf7 609 Gene3D G3DSA:3.40.50.300 527 591 1.3E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02315 e2a54f08eb85e88384227a6dd3e6ebf7 609 Pfam PF13604 AAA domain 151 316 2.8E-25 T 23-04-2016 BUMPUSDA_RS02315 e2a54f08eb85e88384227a6dd3e6ebf7 609 SUPERFAMILY SSF52540 149 598 3.09E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02315 e2a54f08eb85e88384227a6dd3e6ebf7 609 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 5 599 6.3E-181 T 23-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 BUMPUSDA_RS02315 e2a54f08eb85e88384227a6dd3e6ebf7 609 PANTHER PTHR10887 108 314 3.4E-46 T 23-04-2016 BUMPUSDA_RS02315 e2a54f08eb85e88384227a6dd3e6ebf7 609 PANTHER PTHR10887 339 461 3.4E-46 T 23-04-2016 BUMPUSDA_RS02315 e2a54f08eb85e88384227a6dd3e6ebf7 609 PANTHER PTHR10887 535 579 3.4E-46 T 23-04-2016 BUMPUSDA_RS01010 2a01023078f5a443bddb44522eaf3318 754 PANTHER PTHR32282 115 696 5.1E-240 T 23-04-2016 BUMPUSDA_RS01010 2a01023078f5a443bddb44522eaf3318 754 SUPERFAMILY SSF53955 133 334 1.24E-60 T 23-04-2016 IPR023346 Lysozyme-like domain BUMPUSDA_RS01010 2a01023078f5a443bddb44522eaf3318 754 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 2 728 0.0 T 23-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 BUMPUSDA_RS01010 2a01023078f5a443bddb44522eaf3318 754 Pfam PF00905 Penicillin binding protein transpeptidase domain 406 674 4.0E-22 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BUMPUSDA_RS01010 2a01023078f5a443bddb44522eaf3318 754 Gene3D G3DSA:1.10.3810.10 138 314 6.8E-60 T 23-04-2016 BUMPUSDA_RS01010 2a01023078f5a443bddb44522eaf3318 754 PANTHER PTHR32282:SF11 115 696 5.1E-240 T 23-04-2016 BUMPUSDA_RS01010 2a01023078f5a443bddb44522eaf3318 754 SUPERFAMILY SSF56601 345 720 1.15E-97 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like BUMPUSDA_RS01010 2a01023078f5a443bddb44522eaf3318 754 SUPERFAMILY SSF56601 295 317 1.15E-97 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like BUMPUSDA_RS01010 2a01023078f5a443bddb44522eaf3318 754 Gene3D G3DSA:3.30.2060.10 44 133 5.3E-26 T 23-04-2016 BUMPUSDA_RS01010 2a01023078f5a443bddb44522eaf3318 754 Pfam PF00912 Transglycosylase 142 312 2.2E-51 T 23-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 BUMPUSDA_RS01010 2a01023078f5a443bddb44522eaf3318 754 PIRSF PIRSF002799 1 754 0.0 T 23-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 BUMPUSDA_RS01010 2a01023078f5a443bddb44522eaf3318 754 Gene3D G3DSA:3.40.710.10 315 716 1.3E-98 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like BUMPUSDA_RS01010 2a01023078f5a443bddb44522eaf3318 754 Pfam PF14814 Bifunctional transglycosylase second domain 46 130 1.3E-20 T 23-04-2016 IPR028166 Bifunctional transglycosylase second domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 BUMPUSDA_RS00610 981dbe64ebad1a74e7839181da90c6c5 130 PANTHER PTHR10072:SF47 16 127 7.4E-26 T 23-04-2016 BUMPUSDA_RS00610 981dbe64ebad1a74e7839181da90c6c5 130 Pfam PF01521 Iron-sulphur cluster biosynthesis 18 124 5.3E-15 T 23-04-2016 IPR000361 FeS cluster biogenesis BUMPUSDA_RS00610 981dbe64ebad1a74e7839181da90c6c5 130 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 19 128 3.9E-26 T 23-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 BUMPUSDA_RS00610 981dbe64ebad1a74e7839181da90c6c5 130 PANTHER PTHR10072 16 127 7.4E-26 T 23-04-2016 BUMPUSDA_RS00610 981dbe64ebad1a74e7839181da90c6c5 130 SUPERFAMILY SSF89360 13 114 4.9E-22 T 23-04-2016 IPR000361 FeS cluster biogenesis BUMPUSDA_RS00610 981dbe64ebad1a74e7839181da90c6c5 130 Gene3D G3DSA:2.60.300.12 18 116 3.8E-23 T 23-04-2016 IPR000361 FeS cluster biogenesis BUMPUSDA_RS01315 06d4e605274ce91f33bf72d21026365e 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 175 5.4E-19 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 BUMPUSDA_RS01315 06d4e605274ce91f33bf72d21026365e 597 SUPERFAMILY SSF54980 292 370 3.96E-16 T 23-04-2016 IPR009022 Elongation factor G, III-V domain BUMPUSDA_RS01315 06d4e605274ce91f33bf72d21026365e 597 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 3.0E-52 T 23-04-2016 BUMPUSDA_RS01315 06d4e605274ce91f33bf72d21026365e 597 Pfam PF00679 Elongation factor G C-terminus 399 484 1.2E-19 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain BUMPUSDA_RS01315 06d4e605274ce91f33bf72d21026365e 597 SUPERFAMILY SSF54980 399 493 1.44E-21 T 23-04-2016 IPR009022 Elongation factor G, III-V domain BUMPUSDA_RS01315 06d4e605274ce91f33bf72d21026365e 597 Gene3D G3DSA:3.30.70.870 291 369 5.3E-23 T 23-04-2016 BUMPUSDA_RS01315 06d4e605274ce91f33bf72d21026365e 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 268.423 T 23-04-2016 IPR006297 Elongation factor 4 GO:0005525 BUMPUSDA_RS01315 06d4e605274ce91f33bf72d21026365e 597 Gene3D G3DSA:3.40.50.300 2 194 1.1E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01315 06d4e605274ce91f33bf72d21026365e 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site BUMPUSDA_RS01315 06d4e605274ce91f33bf72d21026365e 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 2.2E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BUMPUSDA_RS01315 06d4e605274ce91f33bf72d21026365e 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 2.2E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BUMPUSDA_RS01315 06d4e605274ce91f33bf72d21026365e 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 2.2E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BUMPUSDA_RS01315 06d4e605274ce91f33bf72d21026365e 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 2.2E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BUMPUSDA_RS01315 06d4e605274ce91f33bf72d21026365e 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 2.2E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BUMPUSDA_RS01315 06d4e605274ce91f33bf72d21026365e 597 PANTHER PTHR23115 397 595 9.6E-253 T 23-04-2016 BUMPUSDA_RS01315 06d4e605274ce91f33bf72d21026365e 597 PANTHER PTHR23115 2 373 9.6E-253 T 23-04-2016 BUMPUSDA_RS01315 06d4e605274ce91f33bf72d21026365e 597 Gene3D G3DSA:2.40.30.10 195 289 3.4E-20 T 23-04-2016 BUMPUSDA_RS01315 06d4e605274ce91f33bf72d21026365e 597 PANTHER PTHR23115:SF175 397 595 9.6E-253 T 23-04-2016 BUMPUSDA_RS01315 06d4e605274ce91f33bf72d21026365e 597 PANTHER PTHR23115:SF175 2 373 9.6E-253 T 23-04-2016 BUMPUSDA_RS01315 06d4e605274ce91f33bf72d21026365e 597 SUPERFAMILY SSF50447 165 288 7.73E-27 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain BUMPUSDA_RS01315 06d4e605274ce91f33bf72d21026365e 597 Gene3D G3DSA:3.30.70.240 401 488 1.1E-18 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain BUMPUSDA_RS01315 06d4e605274ce91f33bf72d21026365e 597 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 9.6E-281 T 23-04-2016 IPR006297 Elongation factor 4 GO:0005525 BUMPUSDA_RS01315 06d4e605274ce91f33bf72d21026365e 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 4.5E-10 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 BUMPUSDA_RS01315 06d4e605274ce91f33bf72d21026365e 597 SUPERFAMILY SSF52540 2 205 6.04E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01315 06d4e605274ce91f33bf72d21026365e 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 1.2E-42 T 23-04-2016 IPR013842 GTP-binding protein LepA, C-terminal BUMPUSDA_RS01245 2a8ee47dfee920569d3e070fa78b4458 72 SUPERFAMILY SSF53098 3 62 7.46E-16 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 BUMPUSDA_RS01245 2a8ee47dfee920569d3e070fa78b4458 72 Gene3D G3DSA:3.30.420.10 2 60 1.2E-16 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 BUMPUSDA_RS01245 2a8ee47dfee920569d3e070fa78b4458 72 Pfam PF00075 RNase H 2 57 4.6E-13 T 23-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 BUMPUSDA_RS00600 75c3de28b34b9ae4df1979ec92717148 728 SUPERFAMILY SSF52540 175 375 4.76E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS00600 75c3de28b34b9ae4df1979ec92717148 728 TIGRFAM TIGR00595 priA: primosomal protein N' 228 727 8.6E-81 T 23-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 BUMPUSDA_RS00600 75c3de28b34b9ae4df1979ec92717148 728 Gene3D G3DSA:3.40.50.300 232 377 2.3E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS00600 75c3de28b34b9ae4df1979ec92717148 728 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 728 18.368 T 23-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 BUMPUSDA_RS00600 75c3de28b34b9ae4df1979ec92717148 728 PANTHER PTHR30580 1 728 2.5E-107 T 23-04-2016 BUMPUSDA_RS02460 77624d1121aa4120c0afdcd81d378397 109 Gene3D G3DSA:3.30.1310.10 2 108 1.2E-45 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family BUMPUSDA_RS02460 77624d1121aa4120c0afdcd81d378397 109 PANTHER PTHR33449 1 109 7.2E-46 T 23-04-2016 BUMPUSDA_RS02460 77624d1121aa4120c0afdcd81d378397 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 104 1.1E-35 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family BUMPUSDA_RS02460 77624d1121aa4120c0afdcd81d378397 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 21.709 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family BUMPUSDA_RS02460 77624d1121aa4120c0afdcd81d378397 109 PIRSF PIRSF004555 4 108 8.6E-35 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family BUMPUSDA_RS02460 77624d1121aa4120c0afdcd81d378397 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 99 8.3E-32 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family BUMPUSDA_RS02460 77624d1121aa4120c0afdcd81d378397 109 PANTHER PTHR33449:SF1 1 109 7.2E-46 T 23-04-2016 BUMPUSDA_RS02460 77624d1121aa4120c0afdcd81d378397 109 SUPERFAMILY SSF82607 11 103 4.05E-33 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family BUMPUSDA_RS02660 ba6db2f6916aad28e5ee456139f36697 100 Pfam PF00276 Ribosomal protein L23 9 95 1.1E-22 T 23-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02660 ba6db2f6916aad28e5ee456139f36697 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 18.07 T 23-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02660 ba6db2f6916aad28e5ee456139f36697 100 SUPERFAMILY SSF54189 6 98 3.17E-24 T 23-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02660 ba6db2f6916aad28e5ee456139f36697 100 Gene3D G3DSA:3.30.70.330 6 98 1.9E-25 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 BUMPUSDA_RS02660 ba6db2f6916aad28e5ee456139f36697 100 PANTHER PTHR11620 9 95 2.9E-18 T 23-04-2016 BUMPUSDA_RS02560 a584f9de629ebf46669c88507ec97cd0 118 Gene3D G3DSA:1.10.8.50 1 71 2.8E-23 T 23-04-2016 BUMPUSDA_RS02560 a584f9de629ebf46669c88507ec97cd0 118 SUPERFAMILY SSF46946 2 114 2.51E-41 T 23-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 BUMPUSDA_RS02560 a584f9de629ebf46669c88507ec97cd0 118 Gene3D G3DSA:4.10.910.10 74 118 2.3E-24 T 23-04-2016 IPR027437 30s ribosomal protein S13, C-terminal BUMPUSDA_RS02560 a584f9de629ebf46669c88507ec97cd0 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 1.4E-26 T 23-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02560 a584f9de629ebf46669c88507ec97cd0 118 PIRSF PIRSF002134 1 118 3.4E-38 T 23-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02560 a584f9de629ebf46669c88507ec97cd0 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 23-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02560 a584f9de629ebf46669c88507ec97cd0 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 2.5E-47 T 23-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02560 a584f9de629ebf46669c88507ec97cd0 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 23.637 T 23-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02560 a584f9de629ebf46669c88507ec97cd0 118 PANTHER PTHR10871 1 118 5.9E-52 T 23-04-2016 BUMPUSDA_RS02820 6ce38fdd0bf62abb3311a330353ef1e6 77 PIRSF PIRSF029827 1 77 1.3E-36 T 23-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 BUMPUSDA_RS02820 6ce38fdd0bf62abb3311a330353ef1e6 77 PANTHER PTHR36965:SF1 2 75 1.6E-31 T 23-04-2016 BUMPUSDA_RS02820 6ce38fdd0bf62abb3311a330353ef1e6 77 Gene3D G3DSA:1.10.3880.10 1 76 2.2E-31 T 23-04-2016 BUMPUSDA_RS02820 6ce38fdd0bf62abb3311a330353ef1e6 77 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 75 1.0E-27 T 23-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 BUMPUSDA_RS02820 6ce38fdd0bf62abb3311a330353ef1e6 77 Pfam PF04362 Bacterial Fe(2+) trafficking 1 76 2.8E-29 T 23-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 BUMPUSDA_RS02820 6ce38fdd0bf62abb3311a330353ef1e6 77 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 77 20.638 T 23-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 BUMPUSDA_RS02820 6ce38fdd0bf62abb3311a330353ef1e6 77 SUPERFAMILY SSF111148 1 76 4.71E-32 T 23-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 BUMPUSDA_RS02820 6ce38fdd0bf62abb3311a330353ef1e6 77 PANTHER PTHR36965 2 75 1.6E-31 T 23-04-2016 BUMPUSDA_RS01005 acc2a70974f641a0ae54991c704c9410 266 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 7 249 33.576 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 BUMPUSDA_RS01005 acc2a70974f641a0ae54991c704c9410 266 PANTHER PTHR11142 3 265 3.4E-84 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 BUMPUSDA_RS01005 acc2a70974f641a0ae54991c704c9410 266 Gene3D G3DSA:3.30.70.580 6 110 2.7E-35 T 23-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 BUMPUSDA_RS01005 acc2a70974f641a0ae54991c704c9410 266 SUPERFAMILY SSF55120 6 258 1.38E-85 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 BUMPUSDA_RS01005 acc2a70974f641a0ae54991c704c9410 266 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 8 244 2.3E-68 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 BUMPUSDA_RS01005 acc2a70974f641a0ae54991c704c9410 266 Pfam PF01416 tRNA pseudouridine synthase 149 250 3.8E-26 T 23-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 BUMPUSDA_RS01005 acc2a70974f641a0ae54991c704c9410 266 Pfam PF01416 tRNA pseudouridine synthase 14 108 5.0E-6 T 23-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 BUMPUSDA_RS01005 acc2a70974f641a0ae54991c704c9410 266 Gene3D G3DSA:3.30.70.660 112 247 8.3E-42 T 23-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 BUMPUSDA_RS01005 acc2a70974f641a0ae54991c704c9410 266 PIRSF PIRSF001430 6 262 3.3E-73 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 BUMPUSDA_RS00560 14111083f1af7ad130aa19f8380e5500 213 Pfam PF00677 Lumazine binding domain 3 86 2.5E-17 T 23-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 BUMPUSDA_RS00560 14111083f1af7ad130aa19f8380e5500 213 Pfam PF00677 Lumazine binding domain 100 185 7.8E-17 T 23-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 BUMPUSDA_RS00560 14111083f1af7ad130aa19f8380e5500 213 PIRSF PIRSF000498 1 213 4.5E-71 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 BUMPUSDA_RS00560 14111083f1af7ad130aa19f8380e5500 213 Gene3D G3DSA:2.40.30.20 5 104 8.9E-28 T 23-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BUMPUSDA_RS00560 14111083f1af7ad130aa19f8380e5500 213 Gene3D G3DSA:2.40.30.20 105 200 4.2E-23 T 23-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BUMPUSDA_RS00560 14111083f1af7ad130aa19f8380e5500 213 SUPERFAMILY SSF63380 94 204 2.3E-28 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 BUMPUSDA_RS00560 14111083f1af7ad130aa19f8380e5500 213 PANTHER PTHR21098:SF4 1 202 1.1E-82 T 23-04-2016 BUMPUSDA_RS00560 14111083f1af7ad130aa19f8380e5500 213 SUPERFAMILY SSF63380 1 93 1.11E-24 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 BUMPUSDA_RS00560 14111083f1af7ad130aa19f8380e5500 213 PANTHER PTHR21098 1 202 1.1E-82 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 BUMPUSDA_RS00560 14111083f1af7ad130aa19f8380e5500 213 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 201 2.1E-63 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 BUMPUSDA_RS01190 e02e23c59a1c2e7f555d805fc8860b57 251 Pfam PF01255 Putative undecaprenyl diphosphate synthase 24 244 1.1E-76 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 BUMPUSDA_RS01190 e02e23c59a1c2e7f555d805fc8860b57 251 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 190 207 - T 23-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 BUMPUSDA_RS01190 e02e23c59a1c2e7f555d805fc8860b57 251 SUPERFAMILY SSF64005 19 238 4.84E-82 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 BUMPUSDA_RS01190 e02e23c59a1c2e7f555d805fc8860b57 251 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 17 245 38.337 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 BUMPUSDA_RS01190 e02e23c59a1c2e7f555d805fc8860b57 251 Gene3D G3DSA:3.40.1180.10 19 247 6.6E-89 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 BUMPUSDA_RS01190 e02e23c59a1c2e7f555d805fc8860b57 251 PANTHER PTHR10291 19 249 2.3E-109 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 BUMPUSDA_RS01190 e02e23c59a1c2e7f555d805fc8860b57 251 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 19 244 1.8E-91 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 BUMPUSDA_RS01870 cb3f9daa4a1f98463a106009156017e8 338 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 156 330 6.4E-51 T 23-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 BUMPUSDA_RS01870 cb3f9daa4a1f98463a106009156017e8 338 PANTHER PTHR11405 297 332 1.2E-154 T 23-04-2016 BUMPUSDA_RS01870 cb3f9daa4a1f98463a106009156017e8 338 PANTHER PTHR11405 1 276 1.2E-154 T 23-04-2016 BUMPUSDA_RS01870 cb3f9daa4a1f98463a106009156017e8 338 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BUMPUSDA_RS01870 cb3f9daa4a1f98463a106009156017e8 338 SUPERFAMILY SSF53671 1 331 9.43E-92 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BUMPUSDA_RS01870 cb3f9daa4a1f98463a106009156017e8 338 PANTHER PTHR11405:SF42 297 332 1.2E-154 T 23-04-2016 BUMPUSDA_RS01870 cb3f9daa4a1f98463a106009156017e8 338 PANTHER PTHR11405:SF42 1 276 1.2E-154 T 23-04-2016 BUMPUSDA_RS01870 cb3f9daa4a1f98463a106009156017e8 338 PRINTS PR00102 Ornithine carbamoyltransferase signature 229 239 1.2E-28 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 BUMPUSDA_RS01870 cb3f9daa4a1f98463a106009156017e8 338 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 1.2E-28 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 BUMPUSDA_RS01870 cb3f9daa4a1f98463a106009156017e8 338 PRINTS PR00102 Ornithine carbamoyltransferase signature 83 96 1.2E-28 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 BUMPUSDA_RS01870 cb3f9daa4a1f98463a106009156017e8 338 PRINTS PR00102 Ornithine carbamoyltransferase signature 123 137 1.2E-28 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 BUMPUSDA_RS01870 cb3f9daa4a1f98463a106009156017e8 338 PRINTS PR00102 Ornithine carbamoyltransferase signature 50 64 1.2E-28 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 BUMPUSDA_RS01870 cb3f9daa4a1f98463a106009156017e8 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 1.1E-22 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BUMPUSDA_RS01870 cb3f9daa4a1f98463a106009156017e8 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 134 145 1.1E-22 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BUMPUSDA_RS01870 cb3f9daa4a1f98463a106009156017e8 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 1.1E-22 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BUMPUSDA_RS01870 cb3f9daa4a1f98463a106009156017e8 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 276 1.1E-22 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BUMPUSDA_RS01870 cb3f9daa4a1f98463a106009156017e8 338 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 7 332 2.9E-119 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 BUMPUSDA_RS01870 cb3f9daa4a1f98463a106009156017e8 338 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 6 333 74.727 T 23-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 BUMPUSDA_RS01870 cb3f9daa4a1f98463a106009156017e8 338 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 7 147 8.5E-45 T 23-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 BUMPUSDA_RS01870 cb3f9daa4a1f98463a106009156017e8 338 Gene3D G3DSA:3.40.50.1370 3 143 9.7E-55 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BUMPUSDA_RS01870 cb3f9daa4a1f98463a106009156017e8 338 Gene3D G3DSA:3.40.50.1370 144 319 2.1E-63 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BUMPUSDA_RS00510 5a76cfff1a5ccede488a80bfd3e44626 353 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 317 329 - T 23-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 BUMPUSDA_RS00510 5a76cfff1a5ccede488a80bfd3e44626 353 Gene3D G3DSA:3.40.50.1000 1 149 3.5E-33 T 23-04-2016 IPR023214 HAD-like domain BUMPUSDA_RS00510 5a76cfff1a5ccede488a80bfd3e44626 353 SUPERFAMILY SSF56784 1 155 2.21E-33 T 23-04-2016 IPR023214 HAD-like domain BUMPUSDA_RS00510 5a76cfff1a5ccede488a80bfd3e44626 353 SUPERFAMILY SSF54211 250 340 7.08E-30 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold BUMPUSDA_RS00510 5a76cfff1a5ccede488a80bfd3e44626 353 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 224 237 - T 23-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 BUMPUSDA_RS00510 5a76cfff1a5ccede488a80bfd3e44626 353 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 4 161 1.1E-74 T 23-04-2016 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15|UniPathway: UPA00031|UniPathway: UPA00031 BUMPUSDA_RS00510 5a76cfff1a5ccede488a80bfd3e44626 353 Gene3D G3DSA:3.30.230.40 165 251 2.1E-34 T 23-04-2016 BUMPUSDA_RS00510 5a76cfff1a5ccede488a80bfd3e44626 353 PANTHER PTHR23133:SF2 10 97 3.7E-130 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 BUMPUSDA_RS00510 5a76cfff1a5ccede488a80bfd3e44626 353 PANTHER PTHR23133:SF2 161 353 3.7E-130 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 BUMPUSDA_RS00510 5a76cfff1a5ccede488a80bfd3e44626 353 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 165 353 34.773 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 BUMPUSDA_RS00510 5a76cfff1a5ccede488a80bfd3e44626 353 SUPERFAMILY SSF54211 165 249 4.68E-30 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold BUMPUSDA_RS00510 5a76cfff1a5ccede488a80bfd3e44626 353 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 2 353 52.455 T 23-04-2016 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15|UniPathway: UPA00031|UniPathway: UPA00031 BUMPUSDA_RS00510 5a76cfff1a5ccede488a80bfd3e44626 353 Pfam PF13242 HAD-hyrolase-like 103 144 4.7E-5 T 23-04-2016 BUMPUSDA_RS00510 5a76cfff1a5ccede488a80bfd3e44626 353 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 146 4.7E-21 T 23-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA BUMPUSDA_RS00510 5a76cfff1a5ccede488a80bfd3e44626 353 PANTHER PTHR23133 10 97 3.7E-130 T 23-04-2016 BUMPUSDA_RS00510 5a76cfff1a5ccede488a80bfd3e44626 353 PANTHER PTHR23133 161 353 3.7E-130 T 23-04-2016 BUMPUSDA_RS00510 5a76cfff1a5ccede488a80bfd3e44626 353 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 141 1.6E-36 T 23-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 BUMPUSDA_RS00510 5a76cfff1a5ccede488a80bfd3e44626 353 Gene3D G3DSA:3.30.230.40 255 353 2.0E-27 T 23-04-2016 BUMPUSDA_RS00510 5a76cfff1a5ccede488a80bfd3e44626 353 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 194 335 9.0E-59 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 BUMPUSDA_RS02865 8a915c48c1b6ca321eb4140d6f1c2609 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 23-04-2016 IPR020070 Ribosomal protein L9, N-terminal BUMPUSDA_RS02865 8a915c48c1b6ca321eb4140d6f1c2609 150 PANTHER PTHR21368 1 147 6.5E-34 T 23-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02865 8a915c48c1b6ca321eb4140d6f1c2609 150 Gene3D G3DSA:3.10.430.100 65 148 4.8E-18 T 23-04-2016 IPR020069 Ribosomal protein L9, C-terminal BUMPUSDA_RS02865 8a915c48c1b6ca321eb4140d6f1c2609 150 SUPERFAMILY SSF55658 1 57 8.02E-16 T 23-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal BUMPUSDA_RS02865 8a915c48c1b6ca321eb4140d6f1c2609 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 65 147 9.5E-17 T 23-04-2016 IPR020069 Ribosomal protein L9, C-terminal BUMPUSDA_RS02865 8a915c48c1b6ca321eb4140d6f1c2609 150 Gene3D G3DSA:3.40.5.10 1 51 2.4E-21 T 23-04-2016 IPR020070 Ribosomal protein L9, N-terminal BUMPUSDA_RS02865 8a915c48c1b6ca321eb4140d6f1c2609 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 21.976 T 23-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02865 8a915c48c1b6ca321eb4140d6f1c2609 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 2.2E-19 T 23-04-2016 IPR020070 Ribosomal protein L9, N-terminal BUMPUSDA_RS02865 8a915c48c1b6ca321eb4140d6f1c2609 150 SUPERFAMILY SSF55653 65 148 3.01E-19 T 23-04-2016 IPR020069 Ribosomal protein L9, C-terminal BUMPUSDA_RS02865 8a915c48c1b6ca321eb4140d6f1c2609 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 6.2E-41 T 23-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS01600 5b23a62406564819cc32bab97df835ff 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.538 T 23-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 BUMPUSDA_RS01600 5b23a62406564819cc32bab97df835ff 72 SMART SM00316 4 72 5.2E-7 T 23-04-2016 IPR022967 RNA-binding domain, S1 BUMPUSDA_RS01600 5b23a62406564819cc32bab97df835ff 72 Gene3D G3DSA:2.40.50.140 1 71 4.2E-38 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS01600 5b23a62406564819cc32bab97df835ff 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 7.1E-38 T 23-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 BUMPUSDA_RS01600 5b23a62406564819cc32bab97df835ff 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 2.0E-27 T 23-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 BUMPUSDA_RS01600 5b23a62406564819cc32bab97df835ff 72 PANTHER PTHR33370 1 72 7.4E-47 T 23-04-2016 BUMPUSDA_RS01600 5b23a62406564819cc32bab97df835ff 72 SUPERFAMILY SSF50249 1 70 3.62E-28 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS01550 18b71ec625099e8d7ddef044b363069c 267 Pfam PF00230 Major intrinsic protein 6 256 6.8E-46 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 BUMPUSDA_RS01550 18b71ec625099e8d7ddef044b363069c 267 PANTHER PTHR19139:SF100 3 260 9.9E-60 T 23-04-2016 BUMPUSDA_RS01550 18b71ec625099e8d7ddef044b363069c 267 SUPERFAMILY SSF81338 9 261 4.84E-61 T 23-04-2016 IPR023271 Aquaporin-like BUMPUSDA_RS01550 18b71ec625099e8d7ddef044b363069c 267 Gene3D G3DSA:1.20.1080.10 5 262 3.1E-62 T 23-04-2016 IPR023271 Aquaporin-like BUMPUSDA_RS01550 18b71ec625099e8d7ddef044b363069c 267 ProSitePatterns PS00221 MIP family signature. 68 76 - T 23-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 BUMPUSDA_RS01550 18b71ec625099e8d7ddef044b363069c 267 PANTHER PTHR19139 3 260 9.9E-60 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 BUMPUSDA_RS01550 18b71ec625099e8d7ddef044b363069c 267 PRINTS PR00783 Major intrinsic protein family signature 188 210 4.2E-36 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 BUMPUSDA_RS01550 18b71ec625099e8d7ddef044b363069c 267 PRINTS PR00783 Major intrinsic protein family signature 11 30 4.2E-36 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 BUMPUSDA_RS01550 18b71ec625099e8d7ddef044b363069c 267 PRINTS PR00783 Major intrinsic protein family signature 239 259 4.2E-36 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 BUMPUSDA_RS01550 18b71ec625099e8d7ddef044b363069c 267 PRINTS PR00783 Major intrinsic protein family signature 50 74 4.2E-36 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 BUMPUSDA_RS01550 18b71ec625099e8d7ddef044b363069c 267 PRINTS PR00783 Major intrinsic protein family signature 87 106 4.2E-36 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 BUMPUSDA_RS00145 98c7e5c714251b1d0c0f814d82084265 275 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 259 5.0E-53 T 23-04-2016 IPR023214 HAD-like domain BUMPUSDA_RS00145 98c7e5c714251b1d0c0f814d82084265 275 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 23-04-2016 IPR000150 Cof protein GO:0016787 BUMPUSDA_RS00145 98c7e5c714251b1d0c0f814d82084265 275 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 258 5.9E-48 T 23-04-2016 IPR000150 Cof protein GO:0016787 BUMPUSDA_RS00145 98c7e5c714251b1d0c0f814d82084265 275 Gene3D G3DSA:3.30.1240.10 82 175 7.3E-12 T 23-04-2016 BUMPUSDA_RS00145 98c7e5c714251b1d0c0f814d82084265 275 PANTHER PTHR10000 1 265 2.5E-81 T 23-04-2016 BUMPUSDA_RS00145 98c7e5c714251b1d0c0f814d82084265 275 PANTHER PTHR10000:SF20 1 265 2.5E-81 T 23-04-2016 BUMPUSDA_RS00145 98c7e5c714251b1d0c0f814d82084265 275 Gene3D G3DSA:3.40.50.1000 2 71 1.1E-44 T 23-04-2016 IPR023214 HAD-like domain BUMPUSDA_RS00145 98c7e5c714251b1d0c0f814d82084265 275 Gene3D G3DSA:3.40.50.1000 176 265 1.1E-44 T 23-04-2016 IPR023214 HAD-like domain BUMPUSDA_RS00145 98c7e5c714251b1d0c0f814d82084265 275 SUPERFAMILY SSF56784 2 263 2.64E-57 T 23-04-2016 IPR023214 HAD-like domain BUMPUSDA_RS00145 98c7e5c714251b1d0c0f814d82084265 275 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 230 8.9E-21 T 23-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 BUMPUSDA_RS00340 4f0413a2575cfe805ad96063ef385333 669 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 114 143 - T 23-04-2016 IPR018239 NAD-dependent DNA ligase, active site BUMPUSDA_RS00340 4f0413a2575cfe805ad96063ef385333 669 Gene3D G3DSA:3.40.50.10190 596 668 1.9E-16 T 23-04-2016 IPR001357 BRCT domain BUMPUSDA_RS00340 4f0413a2575cfe805ad96063ef385333 669 PIRSF PIRSF001604 1 669 1.3E-235 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 BUMPUSDA_RS00340 4f0413a2575cfe805ad96063ef385333 669 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 321 397 7.6E-31 T 23-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 BUMPUSDA_RS00340 4f0413a2575cfe805ad96063ef385333 669 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 665 1.8E-224 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 BUMPUSDA_RS00340 4f0413a2575cfe805ad96063ef385333 669 Gene3D G3DSA:2.40.50.140 319 390 2.8E-29 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS00340 4f0413a2575cfe805ad96063ef385333 669 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 4 315 1.2E-115 T 23-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 BUMPUSDA_RS00340 4f0413a2575cfe805ad96063ef385333 669 Gene3D G3DSA:3.30.470.30 118 251 2.4E-44 T 23-04-2016 BUMPUSDA_RS00340 4f0413a2575cfe805ad96063ef385333 669 Gene3D G3DSA:1.10.150.20 434 501 7.6E-17 T 23-04-2016 BUMPUSDA_RS00340 4f0413a2575cfe805ad96063ef385333 669 Gene3D G3DSA:1.10.287.610 2 66 2.5E-19 T 23-04-2016 BUMPUSDA_RS00340 4f0413a2575cfe805ad96063ef385333 669 SMART SM00292 595 669 7.0E-8 T 23-04-2016 IPR001357 BRCT domain BUMPUSDA_RS00340 4f0413a2575cfe805ad96063ef385333 669 SUPERFAMILY SSF50249 318 399 9.59E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS00340 4f0413a2575cfe805ad96063ef385333 669 SUPERFAMILY SSF56091 2 314 1.78E-107 T 23-04-2016 BUMPUSDA_RS00340 4f0413a2575cfe805ad96063ef385333 669 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 330 345 - T 23-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site BUMPUSDA_RS00340 4f0413a2575cfe805ad96063ef385333 669 SMART SM00532 3 447 7.1E-203 T 23-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 BUMPUSDA_RS00340 4f0413a2575cfe805ad96063ef385333 669 SUPERFAMILY SSF52113 594 668 1.29E-15 T 23-04-2016 IPR001357 BRCT domain BUMPUSDA_RS00340 4f0413a2575cfe805ad96063ef385333 669 SUPERFAMILY SSF47781 402 577 1.04E-44 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 BUMPUSDA_RS00340 4f0413a2575cfe805ad96063ef385333 669 PANTHER PTHR23389 1 523 2.5E-160 T 23-04-2016 BUMPUSDA_RS00340 4f0413a2575cfe805ad96063ef385333 669 Hamap MF_01588 DNA ligase [ligA]. 2 669 44.897 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 BUMPUSDA_RS00340 4f0413a2575cfe805ad96063ef385333 669 Gene3D G3DSA:1.10.150.20 503 577 1.5E-18 T 23-04-2016 BUMPUSDA_RS00340 4f0413a2575cfe805ad96063ef385333 669 Pfam PF12826 Helix-hairpin-helix motif 509 572 5.4E-15 T 23-04-2016 BUMPUSDA_RS00340 4f0413a2575cfe805ad96063ef385333 669 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 596 669 1.9E-10 T 23-04-2016 IPR001357 BRCT domain BUMPUSDA_RS00340 4f0413a2575cfe805ad96063ef385333 669 PANTHER PTHR23389:SF9 1 523 2.5E-160 T 23-04-2016 BUMPUSDA_RS01825 00e3c8183453fed2ce4bf91689aae049 380 Gene3D G3DSA:2.40.160.10 24 380 4.3E-58 T 23-04-2016 IPR023614 Porin domain BUMPUSDA_RS01825 00e3c8183453fed2ce4bf91689aae049 380 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 331 348 5.2E-7 T 23-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 BUMPUSDA_RS01825 00e3c8183453fed2ce4bf91689aae049 380 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 105 115 5.2E-7 T 23-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 BUMPUSDA_RS01825 00e3c8183453fed2ce4bf91689aae049 380 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 237 249 5.2E-7 T 23-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 BUMPUSDA_RS01825 00e3c8183453fed2ce4bf91689aae049 380 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 163 174 5.2E-7 T 23-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 BUMPUSDA_RS01825 00e3c8183453fed2ce4bf91689aae049 380 PANTHER PTHR34501 3 380 3.8E-90 T 23-04-2016 BUMPUSDA_RS01825 00e3c8183453fed2ce4bf91689aae049 380 PRINTS PR00183 E.coli/Salmonella-type porin signature 281 300 5.3E-41 T 23-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 BUMPUSDA_RS01825 00e3c8183453fed2ce4bf91689aae049 380 PRINTS PR00183 E.coli/Salmonella-type porin signature 58 76 5.3E-41 T 23-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 BUMPUSDA_RS01825 00e3c8183453fed2ce4bf91689aae049 380 PRINTS PR00183 E.coli/Salmonella-type porin signature 243 260 5.3E-41 T 23-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 BUMPUSDA_RS01825 00e3c8183453fed2ce4bf91689aae049 380 PRINTS PR00183 E.coli/Salmonella-type porin signature 161 183 5.3E-41 T 23-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 BUMPUSDA_RS01825 00e3c8183453fed2ce4bf91689aae049 380 PRINTS PR00183 E.coli/Salmonella-type porin signature 105 127 5.3E-41 T 23-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 BUMPUSDA_RS01825 00e3c8183453fed2ce4bf91689aae049 380 PRINTS PR00183 E.coli/Salmonella-type porin signature 24 40 5.3E-41 T 23-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 BUMPUSDA_RS01825 00e3c8183453fed2ce4bf91689aae049 380 Pfam PF00267 Gram-negative porin 29 380 3.3E-69 T 23-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 BUMPUSDA_RS01825 00e3c8183453fed2ce4bf91689aae049 380 PANTHER PTHR34501:SF4 3 380 3.8E-90 T 23-04-2016 BUMPUSDA_RS01825 00e3c8183453fed2ce4bf91689aae049 380 SUPERFAMILY SSF56935 24 380 8.24E-48 T 23-04-2016 BUMPUSDA_RS02540 c4f567d86820829c75849257ac1c27f1 130 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 24.179 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02540 c4f567d86820829c75849257ac1c27f1 130 Gene3D G3DSA:3.90.1030.10 1 117 3.3E-45 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02540 c4f567d86820829c75849257ac1c27f1 130 Pfam PF01196 Ribosomal protein L17 20 116 1.1E-30 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02540 c4f567d86820829c75849257ac1c27f1 130 SUPERFAMILY SSF64263 1 118 9.16E-46 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02540 c4f567d86820829c75849257ac1c27f1 130 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02540 c4f567d86820829c75849257ac1c27f1 130 PANTHER PTHR14413 1 118 4.7E-57 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02540 c4f567d86820829c75849257ac1c27f1 130 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 1.3E-43 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS00315 bdb40e6f52ac3f0e851c5e6ea6f21035 266 PANTHER PTHR30622:SF3 3 265 2.6E-83 T 23-04-2016 BUMPUSDA_RS00315 bdb40e6f52ac3f0e851c5e6ea6f21035 266 Pfam PF02673 Bacitracin resistance protein BacA 11 260 6.0E-63 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 BUMPUSDA_RS00315 bdb40e6f52ac3f0e851c5e6ea6f21035 266 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 11 259 9.0E-66 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 BUMPUSDA_RS00315 bdb40e6f52ac3f0e851c5e6ea6f21035 266 PANTHER PTHR30622 3 265 2.6E-83 T 23-04-2016 BUMPUSDA_RS00315 bdb40e6f52ac3f0e851c5e6ea6f21035 266 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 5 266 16.582 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 BUMPUSDA_RS01360 fca9f3544410f5f35416ad560329aaf5 214 Hamap MF_00013 Octanoyltransferase [lipB]. 5 206 33.635 T 23-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 BUMPUSDA_RS01360 fca9f3544410f5f35416ad560329aaf5 214 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 71 86 - T 23-04-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 BUMPUSDA_RS01360 fca9f3544410f5f35416ad560329aaf5 214 Pfam PF03099 Biotin/lipoate A/B protein ligase family 64 159 3.7E-9 T 23-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 BUMPUSDA_RS01360 fca9f3544410f5f35416ad560329aaf5 214 Gene3D G3DSA:3.90.1550.10 3 202 9.9E-60 T 23-04-2016 BUMPUSDA_RS01360 fca9f3544410f5f35416ad560329aaf5 214 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 27 203 7.9E-59 T 23-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 BUMPUSDA_RS01360 fca9f3544410f5f35416ad560329aaf5 214 PIRSF PIRSF016262 1 214 5.3E-51 T 23-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 BUMPUSDA_RS01360 fca9f3544410f5f35416ad560329aaf5 214 SUPERFAMILY SSF55681 7 205 2.98E-56 T 23-04-2016 BUMPUSDA_RS01360 fca9f3544410f5f35416ad560329aaf5 214 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 75 128 2.0E-17 T 23-04-2016 BUMPUSDA_RS01360 fca9f3544410f5f35416ad560329aaf5 214 PANTHER PTHR10993 4 214 3.2E-57 T 23-04-2016 BUMPUSDA_RS03015 cb0b9e3115eba85a16d8e19ebb3c7c55 114 Hamap MF_00142 Protein CyaY [cyaY]. 1 112 22.3 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 BUMPUSDA_RS03015 cb0b9e3115eba85a16d8e19ebb3c7c55 114 PANTHER PTHR16821 18 112 1.2E-12 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 BUMPUSDA_RS03015 cb0b9e3115eba85a16d8e19ebb3c7c55 114 SUPERFAMILY SSF55387 11 112 1.01E-30 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 BUMPUSDA_RS03015 cb0b9e3115eba85a16d8e19ebb3c7c55 114 Gene3D G3DSA:3.30.920.10 11 111 2.3E-25 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 BUMPUSDA_RS03015 cb0b9e3115eba85a16d8e19ebb3c7c55 114 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 11 111 2.0E-33 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 BUMPUSDA_RS03015 cb0b9e3115eba85a16d8e19ebb3c7c55 114 SMART SM01219 8 113 9.0E-29 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 BUMPUSDA_RS03015 cb0b9e3115eba85a16d8e19ebb3c7c55 114 Pfam PF01491 Frataxin-like domain 11 108 2.1E-20 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 BUMPUSDA_RS03015 cb0b9e3115eba85a16d8e19ebb3c7c55 114 ProSitePatterns PS01344 Frataxin family signature. 57 71 - T 23-04-2016 IPR020895 Frataxin conserved site BUMPUSDA_RS01850 f373300124c41b8c18380abae273536c 605 Pfam PF00005 ABC transporter 317 450 1.4E-24 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BUMPUSDA_RS01850 f373300124c41b8c18380abae273536c 605 Pfam PF00005 ABC transporter 19 165 1.6E-21 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BUMPUSDA_RS01850 f373300124c41b8c18380abae273536c 605 SUPERFAMILY SSF52540 303 505 3.43E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01850 f373300124c41b8c18380abae273536c 605 SUPERFAMILY SSF52540 2 221 7.91E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01850 f373300124c41b8c18380abae273536c 605 PANTHER PTHR19211:SF45 1 547 4.7E-171 T 23-04-2016 BUMPUSDA_RS01850 f373300124c41b8c18380abae273536c 605 SMART SM00382 28 210 7.3E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain BUMPUSDA_RS01850 f373300124c41b8c18380abae273536c 605 SMART SM00382 325 495 4.0E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain BUMPUSDA_RS01850 f373300124c41b8c18380abae273536c 605 Pfam PF12848 ABC transporter 204 276 1.7E-8 T 23-04-2016 IPR032781 ABC-transporter extension domain BUMPUSDA_RS01850 f373300124c41b8c18380abae273536c 605 PANTHER PTHR19211 1 547 4.7E-171 T 23-04-2016 BUMPUSDA_RS01850 f373300124c41b8c18380abae273536c 605 Gene3D G3DSA:3.40.50.300 2 251 2.5E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01850 f373300124c41b8c18380abae273536c 605 Gene3D G3DSA:3.40.50.300 299 527 3.3E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01850 f373300124c41b8c18380abae273536c 605 ProSitePatterns PS00211 ABC transporters family signature. 422 436 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BUMPUSDA_RS02875 00b5c0c0383c48358d79877eaa4891d3 113 PANTHER PTHR21011 1 113 1.4E-31 T 23-04-2016 BUMPUSDA_RS02875 00b5c0c0383c48358d79877eaa4891d3 113 Gene3D G3DSA:3.30.70.60 1 104 1.2E-34 T 23-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 BUMPUSDA_RS02875 00b5c0c0383c48358d79877eaa4891d3 113 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 19.975 T 23-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 BUMPUSDA_RS02875 00b5c0c0383c48358d79877eaa4891d3 113 Pfam PF01250 Ribosomal protein S6 3 90 3.4E-24 T 23-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 BUMPUSDA_RS02875 00b5c0c0383c48358d79877eaa4891d3 113 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 23-04-2016 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 BUMPUSDA_RS02875 00b5c0c0383c48358d79877eaa4891d3 113 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 92 1.0E-29 T 23-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 BUMPUSDA_RS02875 00b5c0c0383c48358d79877eaa4891d3 113 SUPERFAMILY SSF54995 1 103 1.31E-32 T 23-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 BUMPUSDA_RS02875 00b5c0c0383c48358d79877eaa4891d3 113 PANTHER PTHR21011:SF1 1 113 1.4E-31 T 23-04-2016 BUMPUSDA_RS01020 891ac5199592266e2a81485908176815 141 PANTHER PTHR22769 1 122 3.1E-29 T 23-04-2016 BUMPUSDA_RS01020 891ac5199592266e2a81485908176815 141 SUPERFAMILY SSF55811 3 122 2.03E-21 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 BUMPUSDA_RS01020 891ac5199592266e2a81485908176815 141 TIGRFAM TIGR00586 mutt: mutator mutT protein 3 123 3.3E-30 T 23-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 BUMPUSDA_RS01020 891ac5199592266e2a81485908176815 141 Pfam PF00293 NUDIX domain 9 101 3.1E-12 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 BUMPUSDA_RS01020 891ac5199592266e2a81485908176815 141 Gene3D G3DSA:3.90.79.10 4 130 1.5E-20 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 BUMPUSDA_RS01020 891ac5199592266e2a81485908176815 141 PRINTS PR00502 NUDIX hydrolase family signature 43 58 3.6E-5 T 23-04-2016 IPR020476 NUDIX hydrolase BUMPUSDA_RS01020 891ac5199592266e2a81485908176815 141 PRINTS PR00502 NUDIX hydrolase family signature 29 43 3.6E-5 T 23-04-2016 IPR020476 NUDIX hydrolase BUMPUSDA_RS01020 891ac5199592266e2a81485908176815 141 PANTHER PTHR22769:SF36 1 122 3.1E-29 T 23-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 BUMPUSDA_RS01020 891ac5199592266e2a81485908176815 141 ProSitePatterns PS00893 Nudix box signature. 34 55 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BUMPUSDA_RS00975 f6aa8690a79d766ca39b1f321ec138f1 309 Gene3D G3DSA:3.30.70.890 168 298 6.3E-33 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain BUMPUSDA_RS00975 f6aa8690a79d766ca39b1f321ec138f1 309 PANTHER PTHR20861:SF1 1 306 8.3E-103 T 23-04-2016 BUMPUSDA_RS00975 f6aa8690a79d766ca39b1f321ec138f1 309 PRINTS PR00958 Homoserine kinase signature 137 150 1.6E-29 T 23-04-2016 BUMPUSDA_RS00975 f6aa8690a79d766ca39b1f321ec138f1 309 PRINTS PR00958 Homoserine kinase signature 9 24 1.6E-29 T 23-04-2016 BUMPUSDA_RS00975 f6aa8690a79d766ca39b1f321ec138f1 309 PRINTS PR00958 Homoserine kinase signature 175 192 1.6E-29 T 23-04-2016 BUMPUSDA_RS00975 f6aa8690a79d766ca39b1f321ec138f1 309 PRINTS PR00958 Homoserine kinase signature 97 112 1.6E-29 T 23-04-2016 BUMPUSDA_RS00975 f6aa8690a79d766ca39b1f321ec138f1 309 PRINTS PR00958 Homoserine kinase signature 254 269 1.6E-29 T 23-04-2016 BUMPUSDA_RS00975 f6aa8690a79d766ca39b1f321ec138f1 309 Pfam PF00288 GHMP kinases N terminal domain 84 150 5.4E-15 T 23-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 BUMPUSDA_RS00975 f6aa8690a79d766ca39b1f321ec138f1 309 SUPERFAMILY SSF54211 1 162 1.59E-32 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold BUMPUSDA_RS00975 f6aa8690a79d766ca39b1f321ec138f1 309 PIRSF PIRSF000676 1 309 7.0E-75 T 23-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 BUMPUSDA_RS00975 f6aa8690a79d766ca39b1f321ec138f1 309 Hamap MF_00384 Homoserine kinase [thrB]. 2 307 28.58 T 23-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 BUMPUSDA_RS00975 f6aa8690a79d766ca39b1f321ec138f1 309 Gene3D G3DSA:3.30.230.10 1 162 7.2E-44 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BUMPUSDA_RS00975 f6aa8690a79d766ca39b1f321ec138f1 309 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 90 101 - T 23-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 BUMPUSDA_RS00975 f6aa8690a79d766ca39b1f321ec138f1 309 Pfam PF08544 GHMP kinases C terminal 224 272 7.2E-6 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain BUMPUSDA_RS00975 f6aa8690a79d766ca39b1f321ec138f1 309 PANTHER PTHR20861 1 306 8.3E-103 T 23-04-2016 BUMPUSDA_RS00975 f6aa8690a79d766ca39b1f321ec138f1 309 TIGRFAM TIGR00191 thrB: homoserine kinase 2 306 1.1E-93 T 23-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 BUMPUSDA_RS00975 f6aa8690a79d766ca39b1f321ec138f1 309 SUPERFAMILY SSF55060 172 288 6.83E-26 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain BUMPUSDA_RS01425 e6787681a6b2a28f1389a72e9507a8b4 249 Pfam PF01479 S4 domain 4 36 2.6E-6 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 BUMPUSDA_RS01425 e6787681a6b2a28f1389a72e9507a8b4 249 Pfam PF00849 RNA pseudouridylate synthase 68 200 1.1E-18 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BUMPUSDA_RS01425 e6787681a6b2a28f1389a72e9507a8b4 249 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 106 120 - T 23-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 BUMPUSDA_RS01425 e6787681a6b2a28f1389a72e9507a8b4 249 Gene3D G3DSA:3.10.290.10 4 61 1.7E-8 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 BUMPUSDA_RS01425 e6787681a6b2a28f1389a72e9507a8b4 249 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 72 234 1.1E-46 T 23-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 BUMPUSDA_RS01425 e6787681a6b2a28f1389a72e9507a8b4 249 SUPERFAMILY SSF55174 5 93 9.42E-12 T 23-04-2016 BUMPUSDA_RS01425 e6787681a6b2a28f1389a72e9507a8b4 249 SUPERFAMILY SSF55120 68 235 7.2E-40 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 BUMPUSDA_RS01425 e6787681a6b2a28f1389a72e9507a8b4 249 PANTHER PTHR21600 1 249 2.2E-65 T 23-04-2016 BUMPUSDA_RS01425 e6787681a6b2a28f1389a72e9507a8b4 249 PANTHER PTHR21600:SF2 1 249 2.2E-65 T 23-04-2016 BUMPUSDA_RS02125 7c224f1a5ba01c0c98b0960fd8587c73 122 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 5 119 5.8E-32 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein BUMPUSDA_RS02125 7c224f1a5ba01c0c98b0960fd8587c73 122 Gene3D G3DSA:3.30.479.10 1 119 1.9E-37 T 23-04-2016 BUMPUSDA_RS02125 7c224f1a5ba01c0c98b0960fd8587c73 122 SUPERFAMILY SSF55620 1 119 8.34E-37 T 23-04-2016 BUMPUSDA_RS02125 7c224f1a5ba01c0c98b0960fd8587c73 122 PANTHER PTHR12589 1 120 8.3E-43 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein BUMPUSDA_RS02125 7c224f1a5ba01c0c98b0960fd8587c73 122 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 5 96 2.5E-31 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein BUMPUSDA_RS02125 7c224f1a5ba01c0c98b0960fd8587c73 122 PIRSF PIRSF006113 1 120 2.9E-53 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein BUMPUSDA_RS00720 9fb0ff1a7a90ce6cd8165cdde484bc26 161 Pfam PF00186 Dihydrofolate reductase 3 160 4.5E-53 T 23-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 BUMPUSDA_RS00720 9fb0ff1a7a90ce6cd8165cdde484bc26 161 PANTHER PTHR22778:SF16 1 161 6.2E-33 T 23-04-2016 BUMPUSDA_RS00720 9fb0ff1a7a90ce6cd8165cdde484bc26 161 PIRSF PIRSF000194 1 161 1.7E-49 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 BUMPUSDA_RS00720 9fb0ff1a7a90ce6cd8165cdde484bc26 161 PRINTS PR00070 Dihydrofolate reductase signature 14 24 7.5E-15 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 BUMPUSDA_RS00720 9fb0ff1a7a90ce6cd8165cdde484bc26 161 PRINTS PR00070 Dihydrofolate reductase signature 28 36 7.5E-15 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 BUMPUSDA_RS00720 9fb0ff1a7a90ce6cd8165cdde484bc26 161 PRINTS PR00070 Dihydrofolate reductase signature 41 52 7.5E-15 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 BUMPUSDA_RS00720 9fb0ff1a7a90ce6cd8165cdde484bc26 161 PRINTS PR00070 Dihydrofolate reductase signature 92 106 7.5E-15 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 BUMPUSDA_RS00720 9fb0ff1a7a90ce6cd8165cdde484bc26 161 PANTHER PTHR22778 1 161 6.2E-33 T 23-04-2016 BUMPUSDA_RS00720 9fb0ff1a7a90ce6cd8165cdde484bc26 161 SUPERFAMILY SSF53597 1 157 6.34E-48 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain BUMPUSDA_RS00720 9fb0ff1a7a90ce6cd8165cdde484bc26 161 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 23-04-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 BUMPUSDA_RS00720 9fb0ff1a7a90ce6cd8165cdde484bc26 161 Gene3D G3DSA:3.40.430.10 1 161 5.0E-50 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain BUMPUSDA_RS02525 58870b6321346d7d9fb297b683ff78d8 157 Pfam PF04361 Protein of unknown function (DUF494) 1 157 6.2E-51 T 23-04-2016 IPR007456 Smg BUMPUSDA_RS02525 58870b6321346d7d9fb297b683ff78d8 157 Hamap MF_00598 Protein Smg [smg]. 1 157 30.058 T 23-04-2016 IPR007456 Smg BUMPUSDA_RS02525 58870b6321346d7d9fb297b683ff78d8 157 PANTHER PTHR38692:SF1 1 157 3.1E-61 T 23-04-2016 BUMPUSDA_RS02525 58870b6321346d7d9fb297b683ff78d8 157 PANTHER PTHR38692 1 157 3.1E-61 T 23-04-2016 BUMPUSDA_RS01265 29a7b3bf9d2df952e69d5a2232241f69 199 Pfam PF13580 SIS domain 15 146 1.7E-25 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 BUMPUSDA_RS01265 29a7b3bf9d2df952e69d5a2232241f69 199 SUPERFAMILY SSF53697 2 191 4.45E-44 T 23-04-2016 BUMPUSDA_RS01265 29a7b3bf9d2df952e69d5a2232241f69 199 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 34.697 T 23-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 BUMPUSDA_RS01265 29a7b3bf9d2df952e69d5a2232241f69 199 PANTHER PTHR30390 2 195 6.4E-71 T 23-04-2016 BUMPUSDA_RS01265 29a7b3bf9d2df952e69d5a2232241f69 199 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 1.7E-67 T 23-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 BUMPUSDA_RS01265 29a7b3bf9d2df952e69d5a2232241f69 199 Gene3D G3DSA:3.40.50.10490 1 192 7.3E-53 T 23-04-2016 BUMPUSDA_RS01265 29a7b3bf9d2df952e69d5a2232241f69 199 PANTHER PTHR30390:SF6 2 195 6.4E-71 T 23-04-2016 BUMPUSDA_RS01495 64a7918f94de0e764d439b54d97526ca 228 PANTHER PTHR24220 7 223 2.7E-96 T 23-04-2016 BUMPUSDA_RS01495 64a7918f94de0e764d439b54d97526ca 228 Gene3D G3DSA:3.40.50.300 4 223 3.7E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01495 64a7918f94de0e764d439b54d97526ca 228 SMART SM00382 34 224 3.1E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain BUMPUSDA_RS01495 64a7918f94de0e764d439b54d97526ca 228 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 5 225 8.1E-102 T 23-04-2016 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 BUMPUSDA_RS01495 64a7918f94de0e764d439b54d97526ca 228 Pfam PF00005 ABC transporter 25 173 1.6E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BUMPUSDA_RS01495 64a7918f94de0e764d439b54d97526ca 228 PANTHER PTHR24220:SF111 7 223 2.7E-96 T 23-04-2016 BUMPUSDA_RS01495 64a7918f94de0e764d439b54d97526ca 228 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BUMPUSDA_RS01495 64a7918f94de0e764d439b54d97526ca 228 SUPERFAMILY SSF52540 5 225 2.35E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01740 ba654a1872a1eeea9a73ac054208f4e1 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 146 243 1.4E-29 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G BUMPUSDA_RS01740 ba654a1872a1eeea9a73ac054208f4e1 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 6.1E-48 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G BUMPUSDA_RS01740 ba654a1872a1eeea9a73ac054208f4e1 260 Pfam PF00460 Flagella basal body rod protein 5 35 1.6E-13 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BUMPUSDA_RS01740 ba654a1872a1eeea9a73ac054208f4e1 260 PANTHER PTHR30435 1 260 2.2E-128 T 23-04-2016 BUMPUSDA_RS01740 ba654a1872a1eeea9a73ac054208f4e1 260 PANTHER PTHR30435:SF19 1 260 2.2E-128 T 23-04-2016 BUMPUSDA_RS01740 ba654a1872a1eeea9a73ac054208f4e1 260 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 23-04-2016 IPR019776 Flagellar basal body rod protein, conserved site BUMPUSDA_RS01740 ba654a1872a1eeea9a73ac054208f4e1 260 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 260 2.8E-26 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BUMPUSDA_RS01740 ba654a1872a1eeea9a73ac054208f4e1 260 SUPERFAMILY SSF117143 94 222 5.36E-35 T 23-04-2016 BUMPUSDA_RS01740 ba654a1872a1eeea9a73ac054208f4e1 260 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 259 3.1E-115 T 23-04-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 BUMPUSDA_RS02730 97408dbf631c9240272c31f0039c1143 340 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 5 336 37.423 T 23-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 BUMPUSDA_RS02730 97408dbf631c9240272c31f0039c1143 340 Pfam PF00579 tRNA synthetases class I (W and Y) 6 290 8.3E-74 T 23-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS02730 97408dbf631c9240272c31f0039c1143 340 SUPERFAMILY SSF52374 7 335 2.12E-82 T 23-04-2016 BUMPUSDA_RS02730 97408dbf631c9240272c31f0039c1143 340 Gene3D G3DSA:1.10.240.10 211 329 4.1E-14 T 23-04-2016 BUMPUSDA_RS02730 97408dbf631c9240272c31f0039c1143 340 PANTHER PTHR10055 4 339 2.0E-142 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 BUMPUSDA_RS02730 97408dbf631c9240272c31f0039c1143 340 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 5 335 3.0E-99 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 BUMPUSDA_RS02730 97408dbf631c9240272c31f0039c1143 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 18 34 2.9E-26 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 BUMPUSDA_RS02730 97408dbf631c9240272c31f0039c1143 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 200 210 2.9E-26 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 BUMPUSDA_RS02730 97408dbf631c9240272c31f0039c1143 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 147 168 2.9E-26 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 BUMPUSDA_RS02730 97408dbf631c9240272c31f0039c1143 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 68 87 2.9E-26 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 BUMPUSDA_RS02730 97408dbf631c9240272c31f0039c1143 340 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 14 23 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS02730 97408dbf631c9240272c31f0039c1143 340 PANTHER PTHR10055:SF10 4 339 2.0E-142 T 23-04-2016 BUMPUSDA_RS02730 97408dbf631c9240272c31f0039c1143 340 Gene3D G3DSA:3.40.50.620 6 210 2.4E-76 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BUMPUSDA_RS00675 efeffa815dc8bec02550da01ef1a0352 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 1.1E-31 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BUMPUSDA_RS00675 efeffa815dc8bec02550da01ef1a0352 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 1.1E-31 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BUMPUSDA_RS00675 efeffa815dc8bec02550da01ef1a0352 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 1.1E-31 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BUMPUSDA_RS00675 efeffa815dc8bec02550da01ef1a0352 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 317 333 1.1E-31 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BUMPUSDA_RS00675 efeffa815dc8bec02550da01ef1a0352 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 1.1E-31 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BUMPUSDA_RS00675 efeffa815dc8bec02550da01ef1a0352 689 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 688 6.4E-206 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BUMPUSDA_RS00675 efeffa815dc8bec02550da01ef1a0352 689 PANTHER PTHR30075 1 689 8.1E-251 T 23-04-2016 BUMPUSDA_RS00675 efeffa815dc8bec02550da01ef1a0352 689 Gene3D G3DSA:1.10.730.10 584 679 1.8E-4 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 BUMPUSDA_RS00675 efeffa815dc8bec02550da01ef1a0352 689 SUPERFAMILY SSF109604 341 490 8.37E-10 T 23-04-2016 BUMPUSDA_RS00675 efeffa815dc8bec02550da01ef1a0352 689 PANTHER PTHR30075:SF2 1 689 8.1E-251 T 23-04-2016 BUMPUSDA_RS00675 efeffa815dc8bec02550da01ef1a0352 689 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 688 24.132 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BUMPUSDA_RS00675 efeffa815dc8bec02550da01ef1a0352 689 Pfam PF05746 DALR anticodon binding domain 582 680 7.3E-8 T 23-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 BUMPUSDA_RS00675 efeffa815dc8bec02550da01ef1a0352 689 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 550 2.8E-180 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BUMPUSDA_RS01095 82768a153a1ba0d9ceb468ab0c860212 393 PANTHER PTHR30474:SF2 4 393 3.5E-156 T 23-04-2016 BUMPUSDA_RS01095 82768a153a1ba0d9ceb468ab0c860212 393 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 338 362 - T 23-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 BUMPUSDA_RS01095 82768a153a1ba0d9ceb468ab0c860212 393 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 24 379 2.3E-126 T 23-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 BUMPUSDA_RS01095 82768a153a1ba0d9ceb468ab0c860212 393 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 22 389 38.58 T 23-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 BUMPUSDA_RS01095 82768a153a1ba0d9ceb468ab0c860212 393 PANTHER PTHR30474 4 393 3.5E-156 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 BUMPUSDA_RS01095 82768a153a1ba0d9ceb468ab0c860212 393 Pfam PF01098 Cell cycle protein 26 380 1.6E-110 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 BUMPUSDA_RS02550 3f2643870f967640044e557a7125ad91 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 7.0E-27 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 BUMPUSDA_RS02550 3f2643870f967640044e557a7125ad91 206 PANTHER PTHR11831:SF4 1 206 1.6E-84 T 23-04-2016 BUMPUSDA_RS02550 3f2643870f967640044e557a7125ad91 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 1.4E-79 T 23-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 BUMPUSDA_RS02550 3f2643870f967640044e557a7125ad91 206 PANTHER PTHR11831 1 206 1.6E-84 T 23-04-2016 IPR022801 Ribosomal protein S4/S9 BUMPUSDA_RS02550 3f2643870f967640044e557a7125ad91 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 23-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 BUMPUSDA_RS02550 3f2643870f967640044e557a7125ad91 206 Gene3D G3DSA:3.10.290.10 102 190 5.3E-31 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 BUMPUSDA_RS02550 3f2643870f967640044e557a7125ad91 206 SMART SM01390 3 95 1.3E-42 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 BUMPUSDA_RS02550 3f2643870f967640044e557a7125ad91 206 Pfam PF01479 S4 domain 97 143 7.2E-18 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 BUMPUSDA_RS02550 3f2643870f967640044e557a7125ad91 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 34.131 T 23-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 BUMPUSDA_RS02550 3f2643870f967640044e557a7125ad91 206 Gene3D G3DSA:1.10.1050.10 1 101 1.6E-38 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 BUMPUSDA_RS02550 3f2643870f967640044e557a7125ad91 206 SUPERFAMILY SSF55174 4 206 1.03E-68 T 23-04-2016 BUMPUSDA_RS02550 3f2643870f967640044e557a7125ad91 206 SMART SM00363 96 160 1.8E-19 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 BUMPUSDA_RS00740 6c1047657976f2336cfba1878664f1b6 314 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 286 36.093 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 BUMPUSDA_RS00740 6c1047657976f2336cfba1878664f1b6 314 PANTHER PTHR30426 1 294 2.7E-136 T 23-04-2016 BUMPUSDA_RS00740 6c1047657976f2336cfba1878664f1b6 314 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 284 7.6E-94 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 BUMPUSDA_RS00740 6c1047657976f2336cfba1878664f1b6 314 Pfam PF02401 LytB protein 3 283 5.3E-88 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 BUMPUSDA_RS02170 25b4d19d48b333ebdc69afc83b5e3252 246 Gene3D G3DSA:3.40.50.620 13 216 1.5E-55 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BUMPUSDA_RS02170 25b4d19d48b333ebdc69afc83b5e3252 246 PIRSF PIRSF000857 4 246 9.9E-51 T 23-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 BUMPUSDA_RS02170 25b4d19d48b333ebdc69afc83b5e3252 246 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 9 243 36.012 T 23-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 BUMPUSDA_RS02170 25b4d19d48b333ebdc69afc83b5e3252 246 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 48 219 3.0E-46 T 23-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 BUMPUSDA_RS02170 25b4d19d48b333ebdc69afc83b5e3252 246 SUPERFAMILY SSF52402 24 205 6.09E-47 T 23-04-2016 BUMPUSDA_RS02170 25b4d19d48b333ebdc69afc83b5e3252 246 PANTHER PTHR23293:SF5 20 246 4.3E-76 T 23-04-2016 BUMPUSDA_RS02170 25b4d19d48b333ebdc69afc83b5e3252 246 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 33 243 1.8E-76 T 23-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 BUMPUSDA_RS02170 25b4d19d48b333ebdc69afc83b5e3252 246 PANTHER PTHR23293 20 246 4.3E-76 T 23-04-2016 BUMPUSDA_RS02075 c385c70bbb8d2ffd6497c86f8180a0b6 247 PIRSF PIRSF015601 4 245 1.0E-53 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 BUMPUSDA_RS02075 c385c70bbb8d2ffd6497c86f8180a0b6 247 PANTHER PTHR30027:SF3 4 246 3.1E-67 T 23-04-2016 BUMPUSDA_RS02075 c385c70bbb8d2ffd6497c86f8180a0b6 247 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 6 244 8.2E-67 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 BUMPUSDA_RS02075 c385c70bbb8d2ffd6497c86f8180a0b6 247 Pfam PF04452 RNA methyltransferase 25 239 2.2E-63 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 BUMPUSDA_RS02075 c385c70bbb8d2ffd6497c86f8180a0b6 247 SUPERFAMILY SSF75217 76 244 1.09E-49 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases BUMPUSDA_RS02075 c385c70bbb8d2ffd6497c86f8180a0b6 247 SUPERFAMILY SSF88697 5 71 1.42E-11 T 23-04-2016 IPR015947 PUA-like domain BUMPUSDA_RS02075 c385c70bbb8d2ffd6497c86f8180a0b6 247 Gene3D G3DSA:3.40.1280.10 5 244 3.5E-63 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BUMPUSDA_RS02075 c385c70bbb8d2ffd6497c86f8180a0b6 247 PANTHER PTHR30027 4 246 3.1E-67 T 23-04-2016 BUMPUSDA_RS03060 f3b8f39bc48759275119f30cd01e186e 491 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 34 204 6.8E-53 T 23-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 BUMPUSDA_RS03060 f3b8f39bc48759275119f30cd01e186e 491 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 367 8.9E-114 T 23-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 BUMPUSDA_RS03060 f3b8f39bc48759275119f30cd01e186e 491 SUPERFAMILY SSF48179 210 370 3.23E-39 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 BUMPUSDA_RS03060 f3b8f39bc48759275119f30cd01e186e 491 Gene3D G3DSA:1.10.1040.10 366 481 2.0E-14 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BUMPUSDA_RS03060 f3b8f39bc48759275119f30cd01e186e 491 SUPERFAMILY SSF48179 348 484 1.87E-38 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 BUMPUSDA_RS03060 f3b8f39bc48759275119f30cd01e186e 491 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 342 9.5E-27 T 23-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 BUMPUSDA_RS03060 f3b8f39bc48759275119f30cd01e186e 491 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 359 482 1.4E-18 T 23-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 BUMPUSDA_RS03060 f3b8f39bc48759275119f30cd01e186e 491 Gene3D G3DSA:3.40.50.720 2 201 3.7E-66 T 23-04-2016 IPR016040 NAD(P)-binding domain BUMPUSDA_RS03060 f3b8f39bc48759275119f30cd01e186e 491 SUPERFAMILY SSF51735 27 209 2.78E-54 T 23-04-2016 IPR016040 NAD(P)-binding domain BUMPUSDA_RS03060 f3b8f39bc48759275119f30cd01e186e 491 PANTHER PTHR21371 2 487 1.3E-164 T 23-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 BUMPUSDA_RS03060 f3b8f39bc48759275119f30cd01e186e 491 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 22 485 36.948 T 23-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 BUMPUSDA_RS00900 81a605f5b7ab3e27cc49f180e37a1442 376 Pfam PF00268 Ribonucleotide reductase, small chain 32 332 3.1E-46 T 23-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 BUMPUSDA_RS00900 81a605f5b7ab3e27cc49f180e37a1442 376 PANTHER PTHR23409 197 376 9.7E-239 T 23-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 BUMPUSDA_RS00900 81a605f5b7ab3e27cc49f180e37a1442 376 PANTHER PTHR23409 1 173 9.7E-239 T 23-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 BUMPUSDA_RS00900 81a605f5b7ab3e27cc49f180e37a1442 376 Gene3D G3DSA:1.10.620.20 3 340 2.4E-116 T 23-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 BUMPUSDA_RS00900 81a605f5b7ab3e27cc49f180e37a1442 376 PANTHER PTHR23409:SF23 197 376 9.7E-239 T 23-04-2016 BUMPUSDA_RS00900 81a605f5b7ab3e27cc49f180e37a1442 376 PANTHER PTHR23409:SF23 1 173 9.7E-239 T 23-04-2016 BUMPUSDA_RS00900 81a605f5b7ab3e27cc49f180e37a1442 376 SUPERFAMILY SSF47240 3 340 3.93E-108 T 23-04-2016 IPR009078 Ferritin-like superfamily BUMPUSDA_RS00900 81a605f5b7ab3e27cc49f180e37a1442 376 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 23-04-2016 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 BUMPUSDA_RS02405 3d581b4897a0bcf04d40f7b011c54898 103 Gene3D G3DSA:3.30.300.90 2 98 5.2E-17 T 23-04-2016 IPR002634 BolA protein BUMPUSDA_RS02405 3d581b4897a0bcf04d40f7b011c54898 103 Pfam PF01722 BolA-like protein 10 83 5.1E-17 T 23-04-2016 IPR002634 BolA protein BUMPUSDA_RS02405 3d581b4897a0bcf04d40f7b011c54898 103 SUPERFAMILY SSF82657 1 87 3.53E-18 T 23-04-2016 IPR002634 BolA protein BUMPUSDA_RS02405 3d581b4897a0bcf04d40f7b011c54898 103 PIRSF PIRSF003113 1 99 1.3E-19 T 23-04-2016 IPR002634 BolA protein BUMPUSDA_RS01420 58a63a4d1afdf07c11cc7124bb567d6d 297 PANTHER PTHR32322 1 289 8.9E-103 T 23-04-2016 BUMPUSDA_RS01420 58a63a4d1afdf07c11cc7124bb567d6d 297 Pfam PF00892 EamA-like transporter family 5 138 1.1E-22 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 BUMPUSDA_RS01420 58a63a4d1afdf07c11cc7124bb567d6d 297 Pfam PF00892 EamA-like transporter family 151 286 3.5E-18 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 BUMPUSDA_RS01420 58a63a4d1afdf07c11cc7124bb567d6d 297 SUPERFAMILY SSF103481 39 139 1.96E-8 T 23-04-2016 BUMPUSDA_RS01420 58a63a4d1afdf07c11cc7124bb567d6d 297 PANTHER PTHR32322:SF12 1 289 8.9E-103 T 23-04-2016 BUMPUSDA_RS01790 364ac293a0d122a7434770942a30d93b 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site BUMPUSDA_RS01790 364ac293a0d122a7434770942a30d93b 79 Gene3D G3DSA:1.10.1200.10 3 75 8.3E-31 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain BUMPUSDA_RS01790 364ac293a0d122a7434770942a30d93b 79 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 20.262 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 BUMPUSDA_RS01790 364ac293a0d122a7434770942a30d93b 79 PANTHER PTHR20863 4 73 9.2E-24 T 23-04-2016 BUMPUSDA_RS01790 364ac293a0d122a7434770942a30d93b 79 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 75 3.0E-9 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 BUMPUSDA_RS01790 364ac293a0d122a7434770942a30d93b 79 SUPERFAMILY SSF47336 2 75 1.28E-21 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain BUMPUSDA_RS01790 364ac293a0d122a7434770942a30d93b 79 Pfam PF00550 Phosphopantetheine attachment site 7 73 5.6E-15 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain BUMPUSDA_RS01790 364ac293a0d122a7434770942a30d93b 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 75 8.5E-32 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 BUMPUSDA_RS02770 04f0af9af07a11fd45bc87b9bdc25e9e 321 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 68 78 - T 23-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 BUMPUSDA_RS02770 04f0af9af07a11fd45bc87b9bdc25e9e 321 Gene3D G3DSA:3.40.50.1170 1 185 5.6E-68 T 23-04-2016 IPR027474 L-asparaginase, N-terminal BUMPUSDA_RS02770 04f0af9af07a11fd45bc87b9bdc25e9e 321 SMART SM00870 1 307 1.5E-102 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 BUMPUSDA_RS02770 04f0af9af07a11fd45bc87b9bdc25e9e 321 Pfam PF00710 Asparaginase, N-terminal 12 176 7.8E-58 T 23-04-2016 IPR027474 L-asparaginase, N-terminal BUMPUSDA_RS02770 04f0af9af07a11fd45bc87b9bdc25e9e 321 SUPERFAMILY SSF53774 1 319 2.88E-96 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 BUMPUSDA_RS02770 04f0af9af07a11fd45bc87b9bdc25e9e 321 PANTHER PTHR11707 1 320 1.6E-191 T 23-04-2016 BUMPUSDA_RS02770 04f0af9af07a11fd45bc87b9bdc25e9e 321 PIRSF PIRSF500176 1 316 1.5E-94 T 23-04-2016 BUMPUSDA_RS02770 04f0af9af07a11fd45bc87b9bdc25e9e 321 PIRSF PIRSF001220 1 318 2.9E-82 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 BUMPUSDA_RS02770 04f0af9af07a11fd45bc87b9bdc25e9e 321 PANTHER PTHR11707:SF31 1 320 1.6E-191 T 23-04-2016 BUMPUSDA_RS02770 04f0af9af07a11fd45bc87b9bdc25e9e 321 Gene3D G3DSA:3.40.50.40 195 319 1.6E-41 T 23-04-2016 IPR027473 L-asparaginase, C-terminal domain BUMPUSDA_RS02770 04f0af9af07a11fd45bc87b9bdc25e9e 321 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 6 319 9.3E-102 T 23-04-2016 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 BUMPUSDA_RS02770 04f0af9af07a11fd45bc87b9bdc25e9e 321 PRINTS PR00139 Asparaginase/glutaminase family signature 244 262 3.02E-9 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 BUMPUSDA_RS02770 04f0af9af07a11fd45bc87b9bdc25e9e 321 PRINTS PR00139 Asparaginase/glutaminase family signature 67 85 3.02E-9 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 BUMPUSDA_RS01250 6a9cc9afdf62e085323474bf9686d8c5 97 SUPERFAMILY SSF53098 4 94 1.52E-29 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 BUMPUSDA_RS01250 6a9cc9afdf62e085323474bf9686d8c5 97 Gene3D G3DSA:3.30.420.10 5 95 7.1E-27 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 BUMPUSDA_RS01250 6a9cc9afdf62e085323474bf9686d8c5 97 PANTHER PTHR10642 5 89 1.6E-20 T 23-04-2016 BUMPUSDA_RS01250 6a9cc9afdf62e085323474bf9686d8c5 97 Pfam PF00075 RNase H 5 95 1.3E-23 T 23-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 BUMPUSDA_RS02215 072337e9ab0a59c8c8f50b6c6de90d7a 321 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 187 252 1.7E-22 T 23-04-2016 IPR017703 YgfZ/GcvT conserved site BUMPUSDA_RS02215 072337e9ab0a59c8c8f50b6c6de90d7a 321 SUPERFAMILY SSF103025 16 241 5.49E-53 T 23-04-2016 BUMPUSDA_RS02215 072337e9ab0a59c8c8f50b6c6de90d7a 321 PANTHER PTHR22602:SF0 9 296 2.8E-37 T 23-04-2016 BUMPUSDA_RS02215 072337e9ab0a59c8c8f50b6c6de90d7a 321 Gene3D G3DSA:3.30.70.1400 27 111 4.1E-24 T 23-04-2016 BUMPUSDA_RS02215 072337e9ab0a59c8c8f50b6c6de90d7a 321 PANTHER PTHR22602 9 296 2.8E-37 T 23-04-2016 BUMPUSDA_RS02215 072337e9ab0a59c8c8f50b6c6de90d7a 321 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 321 41.581 T 23-04-2016 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 BUMPUSDA_RS02215 072337e9ab0a59c8c8f50b6c6de90d7a 321 SUPERFAMILY SSF101790 244 317 4.58E-13 T 23-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain BUMPUSDA_RS02905 bab1f2c641f152773a829e9518dee58a 588 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 215 326 6.9E-21 T 23-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 BUMPUSDA_RS02905 bab1f2c641f152773a829e9518dee58a 588 Gene3D G3DSA:3.30.230.10 224 326 2.4E-17 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BUMPUSDA_RS02905 bab1f2c641f152773a829e9518dee58a 588 SUPERFAMILY SSF55874 1 201 1.13E-49 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain BUMPUSDA_RS02905 bab1f2c641f152773a829e9518dee58a 588 Pfam PF08676 MutL C terminal dimerisation domain 408 515 6.1E-12 T 23-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 BUMPUSDA_RS02905 bab1f2c641f152773a829e9518dee58a 588 PANTHER PTHR10073 3 337 9.5E-101 T 23-04-2016 BUMPUSDA_RS02905 bab1f2c641f152773a829e9518dee58a 588 Gene3D G3DSA:3.30.565.10 2 213 2.0E-67 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain BUMPUSDA_RS02905 bab1f2c641f152773a829e9518dee58a 588 SMART SM01340 214 331 1.3E-15 T 23-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 BUMPUSDA_RS02905 bab1f2c641f152773a829e9518dee58a 588 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 134 2.0E-12 T 23-04-2016 BUMPUSDA_RS02905 bab1f2c641f152773a829e9518dee58a 588 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 3.1E-80 T 23-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 BUMPUSDA_RS02905 bab1f2c641f152773a829e9518dee58a 588 SUPERFAMILY SSF118116 408 587 1.05E-27 T 23-04-2016 BUMPUSDA_RS02905 bab1f2c641f152773a829e9518dee58a 588 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 23-04-2016 IPR014762 DNA mismatch repair, conserved site BUMPUSDA_RS02905 bab1f2c641f152773a829e9518dee58a 588 SUPERFAMILY SSF54211 205 331 1.02E-19 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold BUMPUSDA_RS02905 bab1f2c641f152773a829e9518dee58a 588 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 586 20.171 T 23-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 BUMPUSDA_RS02200 01d9ea5c6f7c930815642856e9ffcf0a 203 Pfam PF01926 50S ribosome-binding GTPase 28 146 4.9E-18 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 BUMPUSDA_RS02200 01d9ea5c6f7c930815642856e9ffcf0a 203 SUPERFAMILY SSF52540 5 197 1.84E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02200 01d9ea5c6f7c930815642856e9ffcf0a 203 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 14 197 25.381 T 23-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 BUMPUSDA_RS02200 01d9ea5c6f7c930815642856e9ffcf0a 203 PANTHER PTHR11649 2 198 5.9E-44 T 23-04-2016 BUMPUSDA_RS02200 01d9ea5c6f7c930815642856e9ffcf0a 203 Gene3D G3DSA:3.40.50.300 16 197 8.4E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02200 01d9ea5c6f7c930815642856e9ffcf0a 203 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 10 193 5.1E-67 T 23-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 BUMPUSDA_RS02890 517304da92d4712ee818f12041a0b0ec 309 PANTHER PTHR10264:SF80 1 303 1.0E-96 T 23-04-2016 BUMPUSDA_RS02890 517304da92d4712ee818f12041a0b0ec 309 SUPERFAMILY SSF117892 56 208 1.44E-23 T 23-04-2016 IPR001107 Band 7 domain BUMPUSDA_RS02890 517304da92d4712ee818f12041a0b0ec 309 PIRSF PIRSF005651 1 309 1.4E-100 T 23-04-2016 IPR010200 HflC GO:0016021|GO:0052547 BUMPUSDA_RS02890 517304da92d4712ee818f12041a0b0ec 309 Pfam PF01145 SPFH domain / Band 7 family 22 218 2.9E-32 T 23-04-2016 IPR001107 Band 7 domain BUMPUSDA_RS02890 517304da92d4712ee818f12041a0b0ec 309 PANTHER PTHR10264 1 303 1.0E-96 T 23-04-2016 IPR001972 Stomatin family GO:0016020 BUMPUSDA_RS02890 517304da92d4712ee818f12041a0b0ec 309 TIGRFAM TIGR01932 hflC: HflC protein 1 302 1.5E-120 T 23-04-2016 IPR010200 HflC GO:0016021|GO:0052547 BUMPUSDA_RS02890 517304da92d4712ee818f12041a0b0ec 309 SMART SM00244 18 202 1.4E-43 T 23-04-2016 IPR001107 Band 7 domain BUMPUSDA_RS01375 a7b7e139b6357ba4a7597c8bc9204a16 196 PANTHER PTHR21327 1 196 7.8E-116 T 23-04-2016 BUMPUSDA_RS01375 a7b7e139b6357ba4a7597c8bc9204a16 196 SUPERFAMILY SSF142695 6 173 4.97E-64 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 BUMPUSDA_RS01375 a7b7e139b6357ba4a7597c8bc9204a16 196 Pfam PF00925 GTP cyclohydrolase II 7 170 1.5E-66 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 BUMPUSDA_RS01375 a7b7e139b6357ba4a7597c8bc9204a16 196 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 196 46.737 T 23-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 BUMPUSDA_RS01375 a7b7e139b6357ba4a7597c8bc9204a16 196 PANTHER PTHR21327:SF14 1 196 7.8E-116 T 23-04-2016 BUMPUSDA_RS01375 a7b7e139b6357ba4a7597c8bc9204a16 196 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 7 194 6.0E-88 T 23-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 BUMPUSDA_RS00930 f2ba59a4e8793fbdc944f75f549bc58d 185 Hamap MF_01151 Protein GrpE [grpE]. 4 184 14.074 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 BUMPUSDA_RS00930 f2ba59a4e8793fbdc944f75f549bc58d 185 PANTHER PTHR21237 1 185 1.1E-12 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 BUMPUSDA_RS00930 f2ba59a4e8793fbdc944f75f549bc58d 185 Gene3D G3DSA:3.90.20.20 31 125 1.5E-12 T 23-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil BUMPUSDA_RS00930 f2ba59a4e8793fbdc944f75f549bc58d 185 Pfam PF01025 GrpE 30 184 6.2E-27 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 BUMPUSDA_RS00930 f2ba59a4e8793fbdc944f75f549bc58d 185 Gene3D G3DSA:2.30.22.10 128 185 2.1E-8 T 23-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 BUMPUSDA_RS00930 f2ba59a4e8793fbdc944f75f549bc58d 185 SUPERFAMILY SSF58014 36 128 2.35E-12 T 23-04-2016 BUMPUSDA_RS00930 f2ba59a4e8793fbdc944f75f549bc58d 185 PRINTS PR00773 GrpE protein signature 163 182 4.8E-9 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 BUMPUSDA_RS00930 f2ba59a4e8793fbdc944f75f549bc58d 185 PRINTS PR00773 GrpE protein signature 53 69 4.8E-9 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 BUMPUSDA_RS00930 f2ba59a4e8793fbdc944f75f549bc58d 185 PRINTS PR00773 GrpE protein signature 136 151 4.8E-9 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 BUMPUSDA_RS00930 f2ba59a4e8793fbdc944f75f549bc58d 185 PRINTS PR00773 GrpE protein signature 81 96 4.8E-9 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 BUMPUSDA_RS00930 f2ba59a4e8793fbdc944f75f549bc58d 185 SUPERFAMILY SSF51064 129 184 2.22E-9 T 23-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 BUMPUSDA_RS02010 1767b79c545473fde85dc02caad5c21c 115 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 23-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02010 1767b79c545473fde85dc02caad5c21c 115 PIRSF PIRSF002191 1 115 7.5E-45 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02010 1767b79c545473fde85dc02caad5c21c 115 Pfam PF01245 Ribosomal protein L19 3 113 1.0E-44 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02010 1767b79c545473fde85dc02caad5c21c 115 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 1.1E-45 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02010 1767b79c545473fde85dc02caad5c21c 115 PANTHER PTHR15680 1 114 2.4E-44 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02010 1767b79c545473fde85dc02caad5c21c 115 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 27.27 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02010 1767b79c545473fde85dc02caad5c21c 115 SUPERFAMILY SSF50104 2 114 4.11E-42 T 23-04-2016 IPR008991 Translation protein SH3-like domain BUMPUSDA_RS02010 1767b79c545473fde85dc02caad5c21c 115 PRINTS PR00061 Ribosomal protein L19 signature 88 113 7.3E-42 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02010 1767b79c545473fde85dc02caad5c21c 115 PRINTS PR00061 Ribosomal protein L19 signature 34 63 7.3E-42 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02010 1767b79c545473fde85dc02caad5c21c 115 PRINTS PR00061 Ribosomal protein L19 signature 4 33 7.3E-42 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS03085 d49f4f4415ac7d556a5a1f62e425f624 174 PANTHER PTHR14021:SF15 1 173 2.7E-25 T 23-04-2016 BUMPUSDA_RS03085 d49f4f4415ac7d556a5a1f62e425f624 174 Gene3D G3DSA:1.10.287.110 1 73 1.2E-20 T 23-04-2016 IPR001623 DnaJ domain BUMPUSDA_RS03085 d49f4f4415ac7d556a5a1f62e425f624 174 Gene3D G3DSA:1.20.1280.20 86 164 3.4E-6 T 23-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 BUMPUSDA_RS03085 d49f4f4415ac7d556a5a1f62e425f624 174 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 164 2.3E-24 T 23-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 BUMPUSDA_RS03085 d49f4f4415ac7d556a5a1f62e425f624 174 SUPERFAMILY SSF47144 78 164 1.57E-10 T 23-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 BUMPUSDA_RS03085 d49f4f4415ac7d556a5a1f62e425f624 174 SUPERFAMILY SSF46565 1 74 1.83E-16 T 23-04-2016 IPR001623 DnaJ domain BUMPUSDA_RS03085 d49f4f4415ac7d556a5a1f62e425f624 174 SMART SM00271 1 66 5.0E-6 T 23-04-2016 IPR001623 DnaJ domain BUMPUSDA_RS03085 d49f4f4415ac7d556a5a1f62e425f624 174 PANTHER PTHR14021 1 173 2.7E-25 T 23-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 BUMPUSDA_RS03085 d49f4f4415ac7d556a5a1f62e425f624 174 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 18.933 T 23-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 BUMPUSDA_RS00380 fcd0ff93648564bcd71ca84a0b3ab9c2 222 Pfam PF02108 Flagellar assembly protein FliH 90 214 2.5E-27 T 23-04-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE BUMPUSDA_RS00380 fcd0ff93648564bcd71ca84a0b3ab9c2 222 PRINTS PR01003 Flagellar assembly protein FliH signature 151 178 1.1E-12 T 23-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 BUMPUSDA_RS00380 fcd0ff93648564bcd71ca84a0b3ab9c2 222 PRINTS PR01003 Flagellar assembly protein FliH signature 128 150 1.1E-12 T 23-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 BUMPUSDA_RS00380 fcd0ff93648564bcd71ca84a0b3ab9c2 222 PRINTS PR01003 Flagellar assembly protein FliH signature 196 221 1.1E-12 T 23-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 BUMPUSDA_RS00380 fcd0ff93648564bcd71ca84a0b3ab9c2 222 PRINTS PR01003 Flagellar assembly protein FliH signature 110 127 1.1E-12 T 23-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 BUMPUSDA_RS01765 21c9aa3d8b75ca15d759183e1f8defe9 915 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 425 2.5E-158 T 23-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 BUMPUSDA_RS01765 21c9aa3d8b75ca15d759183e1f8defe9 915 Pfam PF00575 S1 RNA binding domain 36 118 3.4E-11 T 23-04-2016 IPR003029 S1 domain GO:0003676 BUMPUSDA_RS01765 21c9aa3d8b75ca15d759183e1f8defe9 915 Hamap MF_00970 Ribonuclease E [rne]. 1 901 28.953 T 23-04-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 BUMPUSDA_RS01765 21c9aa3d8b75ca15d759183e1f8defe9 915 Pfam PF10150 Ribonuclease E/G family 121 391 1.3E-85 T 23-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 BUMPUSDA_RS01765 21c9aa3d8b75ca15d759183e1f8defe9 915 PANTHER PTHR30001 1 533 2.4E-298 T 23-04-2016 BUMPUSDA_RS01765 21c9aa3d8b75ca15d759183e1f8defe9 915 SUPERFAMILY SSF50249 40 124 6.59E-18 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS01765 21c9aa3d8b75ca15d759183e1f8defe9 915 PANTHER PTHR30001:SF1 1 533 2.4E-298 T 23-04-2016 BUMPUSDA_RS01765 21c9aa3d8b75ca15d759183e1f8defe9 915 Gene3D G3DSA:2.40.50.140 32 124 4.8E-31 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS01765 21c9aa3d8b75ca15d759183e1f8defe9 915 SMART SM00316 37 119 1.2E-9 T 23-04-2016 IPR022967 RNA-binding domain, S1 BUMPUSDA_RS00705 d289d5cb72c4ad26aac6861c53a37cf6 430 SUPERFAMILY SSF54534 176 278 6.41E-12 T 23-04-2016 BUMPUSDA_RS00705 d289d5cb72c4ad26aac6861c53a37cf6 430 Pfam PF09312 SurA N-terminal domain 25 141 5.9E-17 T 23-04-2016 IPR015391 SurA N-terminal BUMPUSDA_RS00705 d289d5cb72c4ad26aac6861c53a37cf6 430 SUPERFAMILY SSF54534 284 387 4.25E-24 T 23-04-2016 BUMPUSDA_RS00705 d289d5cb72c4ad26aac6861c53a37cf6 430 Pfam PF13616 PPIC-type PPIASE domain 286 386 1.3E-19 T 23-04-2016 BUMPUSDA_RS00705 d289d5cb72c4ad26aac6861c53a37cf6 430 Pfam PF13616 PPIC-type PPIASE domain 165 276 3.1E-7 T 23-04-2016 BUMPUSDA_RS00705 d289d5cb72c4ad26aac6861c53a37cf6 430 Gene3D G3DSA:3.10.50.40 175 280 5.5E-14 T 23-04-2016 BUMPUSDA_RS00705 d289d5cb72c4ad26aac6861c53a37cf6 430 Gene3D G3DSA:3.10.50.40 282 389 8.3E-25 T 23-04-2016 BUMPUSDA_RS00705 d289d5cb72c4ad26aac6861c53a37cf6 430 PANTHER PTHR10657 1 428 2.6E-44 T 23-04-2016 BUMPUSDA_RS00705 d289d5cb72c4ad26aac6861c53a37cf6 430 SUPERFAMILY SSF109998 25 204 1.2E-25 T 23-04-2016 IPR027304 Trigger factor/SurA domain BUMPUSDA_RS00705 d289d5cb72c4ad26aac6861c53a37cf6 430 Hamap MF_01183 Chaperone SurA [surA]. 5 430 23.591 T 23-04-2016 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 BUMPUSDA_RS00705 d289d5cb72c4ad26aac6861c53a37cf6 430 PANTHER PTHR10657:SF15 1 428 2.6E-44 T 23-04-2016 BUMPUSDA_RS00190 859aa1a728a976885ef89d6df9c2653f 231 PANTHER PTHR23105 21 229 2.5E-70 T 23-04-2016 BUMPUSDA_RS00190 859aa1a728a976885ef89d6df9c2653f 231 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 23-04-2016 IPR023673 Ribosomal protein L1, conserved site BUMPUSDA_RS00190 859aa1a728a976885ef89d6df9c2653f 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 39.94 T 23-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 BUMPUSDA_RS00190 859aa1a728a976885ef89d6df9c2653f 231 PIRSF PIRSF002155 1 227 3.1E-74 T 23-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 BUMPUSDA_RS00190 859aa1a728a976885ef89d6df9c2653f 231 Gene3D G3DSA:3.30.190.20 161 226 3.2E-39 T 23-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 BUMPUSDA_RS00190 859aa1a728a976885ef89d6df9c2653f 231 Gene3D G3DSA:3.30.190.20 18 68 3.2E-39 T 23-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 BUMPUSDA_RS00190 859aa1a728a976885ef89d6df9c2653f 231 Pfam PF00687 Ribosomal protein L1p/L10e family 30 220 1.7E-47 T 23-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein BUMPUSDA_RS00190 859aa1a728a976885ef89d6df9c2653f 231 SUPERFAMILY SSF56808 6 225 7.06E-75 T 23-04-2016 IPR023674 Ribosomal protein L1-like BUMPUSDA_RS00190 859aa1a728a976885ef89d6df9c2653f 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 7.3E-99 T 23-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 BUMPUSDA_RS00190 859aa1a728a976885ef89d6df9c2653f 231 Gene3D G3DSA:3.40.50.790 69 159 3.5E-37 T 23-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich BUMPUSDA_RS00190 859aa1a728a976885ef89d6df9c2653f 231 PANTHER PTHR23105:SF5 21 229 2.5E-70 T 23-04-2016 BUMPUSDA_RS02495 608e8ed84afa607655d92cd97bc21337 69 PRINTS PR00050 Cold shock protein signature 42 60 6.7E-19 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BUMPUSDA_RS02495 608e8ed84afa607655d92cd97bc21337 69 PRINTS PR00050 Cold shock protein signature 27 36 6.7E-19 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BUMPUSDA_RS02495 608e8ed84afa607655d92cd97bc21337 69 PRINTS PR00050 Cold shock protein signature 6 21 6.7E-19 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BUMPUSDA_RS02495 608e8ed84afa607655d92cd97bc21337 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 1.9E-33 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BUMPUSDA_RS02495 608e8ed84afa607655d92cd97bc21337 69 SMART SM00357 5 69 6.5E-33 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 BUMPUSDA_RS02495 608e8ed84afa607655d92cd97bc21337 69 PANTHER PTHR11544 1 69 2.8E-42 T 23-04-2016 BUMPUSDA_RS02495 608e8ed84afa607655d92cd97bc21337 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 23-04-2016 IPR019844 Cold-shock conserved site BUMPUSDA_RS02495 608e8ed84afa607655d92cd97bc21337 69 PIRSF PIRSF002599 1 69 1.2E-26 T 23-04-2016 IPR012156 Cold shock, CspA GO:0003676 BUMPUSDA_RS02495 608e8ed84afa607655d92cd97bc21337 69 Gene3D G3DSA:2.40.50.140 4 67 1.8E-32 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS02495 608e8ed84afa607655d92cd97bc21337 69 SUPERFAMILY SSF50249 3 68 1.03E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS02435 cee058fa732e5e8f8e2d4c4bb3126ac0 230 SUPERFAMILY SSF52402 1 216 2.87E-56 T 23-04-2016 BUMPUSDA_RS02435 cee058fa732e5e8f8e2d4c4bb3126ac0 230 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 219 45.117 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 BUMPUSDA_RS02435 cee058fa732e5e8f8e2d4c4bb3126ac0 230 PIRSF PIRSF006293 1 225 5.4E-71 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 BUMPUSDA_RS02435 cee058fa732e5e8f8e2d4c4bb3126ac0 230 Gene3D G3DSA:3.40.50.620 1 215 1.1E-68 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BUMPUSDA_RS02435 cee058fa732e5e8f8e2d4c4bb3126ac0 230 PANTHER PTHR11587:SF3 1 210 1.5E-80 T 23-04-2016 BUMPUSDA_RS02435 cee058fa732e5e8f8e2d4c4bb3126ac0 230 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 206 3.5E-71 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 BUMPUSDA_RS02435 cee058fa732e5e8f8e2d4c4bb3126ac0 230 Pfam PF06508 Queuosine biosynthesis protein QueC 3 213 1.7E-72 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 BUMPUSDA_RS02435 cee058fa732e5e8f8e2d4c4bb3126ac0 230 PANTHER PTHR11587 1 210 1.5E-80 T 23-04-2016 BUMPUSDA_RS02390 088546d91e683b296ef15a641b7a5f2a 205 SUPERFAMILY SSF81452 20 203 2.22E-49 T 23-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 BUMPUSDA_RS02390 088546d91e683b296ef15a641b7a5f2a 205 Gene3D G3DSA:1.20.120.80 23 202 2.3E-42 T 23-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 BUMPUSDA_RS02390 088546d91e683b296ef15a641b7a5f2a 205 PANTHER PTHR11403:SF2 24 205 1.3E-63 T 23-04-2016 BUMPUSDA_RS02390 088546d91e683b296ef15a641b7a5f2a 205 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 26 205 4.7E-69 T 23-04-2016 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 BUMPUSDA_RS02390 088546d91e683b296ef15a641b7a5f2a 205 PANTHER PTHR11403 24 205 1.3E-63 T 23-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 BUMPUSDA_RS02390 088546d91e683b296ef15a641b7a5f2a 205 Pfam PF00510 Cytochrome c oxidase subunit III 26 203 8.4E-12 T 23-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 BUMPUSDA_RS00650 b523d46a006f13346aa61d1de895cfca 799 Pfam PF03483 B3/4 domain 214 383 1.2E-37 T 23-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 BUMPUSDA_RS00650 b523d46a006f13346aa61d1de895cfca 799 Gene3D G3DSA:3.30.70.380 707 798 3.9E-22 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 BUMPUSDA_RS00650 b523d46a006f13346aa61d1de895cfca 799 Gene3D G3DSA:3.30.56.20 404 476 2.7E-18 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 BUMPUSDA_RS00650 b523d46a006f13346aa61d1de895cfca 799 Pfam PF03147 Ferredoxin-fold anticodon binding domain 705 798 1.2E-21 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 BUMPUSDA_RS00650 b523d46a006f13346aa61d1de895cfca 799 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 798 3.5E-217 T 23-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 BUMPUSDA_RS00650 b523d46a006f13346aa61d1de895cfca 799 Pfam PF03484 tRNA synthetase B5 domain 407 473 1.0E-14 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 BUMPUSDA_RS00650 b523d46a006f13346aa61d1de895cfca 799 SMART SM00873 210 383 3.6E-31 T 23-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 BUMPUSDA_RS00650 b523d46a006f13346aa61d1de895cfca 799 Pfam PF01588 Putative tRNA binding domain 45 144 1.1E-18 T 23-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 BUMPUSDA_RS00650 b523d46a006f13346aa61d1de895cfca 799 Gene3D G3DSA:3.50.40.10 199 389 1.5E-39 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 BUMPUSDA_RS00650 b523d46a006f13346aa61d1de895cfca 799 SMART SM00896 705 798 6.5E-29 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 BUMPUSDA_RS00650 b523d46a006f13346aa61d1de895cfca 799 Gene3D G3DSA:3.30.930.10 496 694 4.8E-55 T 23-04-2016 BUMPUSDA_RS00650 b523d46a006f13346aa61d1de895cfca 799 SUPERFAMILY SSF50249 36 188 1.22E-33 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS00650 b523d46a006f13346aa61d1de895cfca 799 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 792 39.416 T 23-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 BUMPUSDA_RS00650 b523d46a006f13346aa61d1de895cfca 799 Gene3D G3DSA:2.40.50.140 42 150 2.8E-30 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS00650 b523d46a006f13346aa61d1de895cfca 799 SMART SM00874 404 473 3.2E-20 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 BUMPUSDA_RS00650 b523d46a006f13346aa61d1de895cfca 799 SUPERFAMILY SSF55681 469 693 2.98E-46 T 23-04-2016 BUMPUSDA_RS00650 b523d46a006f13346aa61d1de895cfca 799 SUPERFAMILY SSF46955 406 476 2.47E-15 T 23-04-2016 IPR009061 Putative DNA-binding domain BUMPUSDA_RS00650 b523d46a006f13346aa61d1de895cfca 799 PANTHER PTHR10947:SF0 2 798 7.1E-206 T 23-04-2016 BUMPUSDA_RS00650 b523d46a006f13346aa61d1de895cfca 799 Gene3D G3DSA:3.30.56.10 154 183 4.1E-21 T 23-04-2016 BUMPUSDA_RS00650 b523d46a006f13346aa61d1de895cfca 799 Gene3D G3DSA:3.30.56.10 1 38 4.1E-21 T 23-04-2016 BUMPUSDA_RS00650 b523d46a006f13346aa61d1de895cfca 799 SUPERFAMILY SSF56037 195 390 3.4E-44 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 BUMPUSDA_RS00650 b523d46a006f13346aa61d1de895cfca 799 SUPERFAMILY SSF54991 700 798 6.93E-27 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 BUMPUSDA_RS00650 b523d46a006f13346aa61d1de895cfca 799 PANTHER PTHR10947 2 798 7.1E-206 T 23-04-2016 BUMPUSDA_RS00825 b438709462d61270d4aa48284429080b 612 Pfam PF00361 Proton-conducting membrane transporter 133 425 3.0E-84 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 BUMPUSDA_RS00825 b438709462d61270d4aa48284429080b 612 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 2 609 2.6E-221 T 23-04-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 BUMPUSDA_RS00825 b438709462d61270d4aa48284429080b 612 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 315 327 7.9E-50 T 23-04-2016 BUMPUSDA_RS00825 b438709462d61270d4aa48284429080b 612 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 82 107 7.9E-50 T 23-04-2016 BUMPUSDA_RS00825 b438709462d61270d4aa48284429080b 612 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 110 130 7.9E-50 T 23-04-2016 BUMPUSDA_RS00825 b438709462d61270d4aa48284429080b 612 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 418 437 7.9E-50 T 23-04-2016 BUMPUSDA_RS00825 b438709462d61270d4aa48284429080b 612 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 247 273 7.9E-50 T 23-04-2016 BUMPUSDA_RS00825 b438709462d61270d4aa48284429080b 612 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 157 178 7.9E-50 T 23-04-2016 BUMPUSDA_RS00825 b438709462d61270d4aa48284429080b 612 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 225 246 7.9E-50 T 23-04-2016 BUMPUSDA_RS00825 b438709462d61270d4aa48284429080b 612 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 417 439 2.0E-14 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 BUMPUSDA_RS00825 b438709462d61270d4aa48284429080b 612 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 265 287 2.0E-14 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 BUMPUSDA_RS00825 b438709462d61270d4aa48284429080b 612 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 58 82 2.0E-14 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 BUMPUSDA_RS00825 b438709462d61270d4aa48284429080b 612 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 84 104 2.0E-14 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 BUMPUSDA_RS00825 b438709462d61270d4aa48284429080b 612 PANTHER PTHR22773:SF50 1 567 4.7E-194 T 23-04-2016 BUMPUSDA_RS00825 b438709462d61270d4aa48284429080b 612 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 121 2.3E-22 T 23-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal BUMPUSDA_RS00825 b438709462d61270d4aa48284429080b 612 PANTHER PTHR22773 1 567 4.7E-194 T 23-04-2016 BUMPUSDA_RS01595 24a8fe2ae8d427298a6b24bd9dad0c57 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 200 216 2.8E-73 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BUMPUSDA_RS01595 24a8fe2ae8d427298a6b24bd9dad0c57 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 42 57 2.8E-73 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BUMPUSDA_RS01595 24a8fe2ae8d427298a6b24bd9dad0c57 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 63 73 2.8E-73 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BUMPUSDA_RS01595 24a8fe2ae8d427298a6b24bd9dad0c57 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 108 116 2.8E-73 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BUMPUSDA_RS01595 24a8fe2ae8d427298a6b24bd9dad0c57 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 279 297 2.8E-73 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BUMPUSDA_RS01595 24a8fe2ae8d427298a6b24bd9dad0c57 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 145 169 2.8E-73 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BUMPUSDA_RS01595 24a8fe2ae8d427298a6b24bd9dad0c57 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 130 142 2.8E-73 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BUMPUSDA_RS01595 24a8fe2ae8d427298a6b24bd9dad0c57 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 9 31 2.8E-73 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BUMPUSDA_RS01595 24a8fe2ae8d427298a6b24bd9dad0c57 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 241 262 2.8E-73 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BUMPUSDA_RS01595 24a8fe2ae8d427298a6b24bd9dad0c57 320 SUPERFAMILY SSF51905 6 310 5.53E-46 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BUMPUSDA_RS01595 24a8fe2ae8d427298a6b24bd9dad0c57 320 PANTHER PTHR22912 6 318 1.7E-135 T 23-04-2016 BUMPUSDA_RS01595 24a8fe2ae8d427298a6b24bd9dad0c57 320 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 137 157 - T 23-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 BUMPUSDA_RS01595 24a8fe2ae8d427298a6b24bd9dad0c57 320 Gene3D G3DSA:3.50.50.60 7 111 3.5E-30 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BUMPUSDA_RS01595 24a8fe2ae8d427298a6b24bd9dad0c57 320 PANTHER PTHR22912:SF48 6 318 1.7E-135 T 23-04-2016 BUMPUSDA_RS01595 24a8fe2ae8d427298a6b24bd9dad0c57 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 239 255 3.9E-39 T 23-04-2016 BUMPUSDA_RS01595 24a8fe2ae8d427298a6b24bd9dad0c57 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 3.9E-39 T 23-04-2016 BUMPUSDA_RS01595 24a8fe2ae8d427298a6b24bd9dad0c57 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 269 291 3.9E-39 T 23-04-2016 BUMPUSDA_RS01595 24a8fe2ae8d427298a6b24bd9dad0c57 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 3.9E-39 T 23-04-2016 BUMPUSDA_RS01595 24a8fe2ae8d427298a6b24bd9dad0c57 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 3.9E-39 T 23-04-2016 BUMPUSDA_RS01595 24a8fe2ae8d427298a6b24bd9dad0c57 320 Gene3D G3DSA:3.50.50.60 112 309 6.3E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BUMPUSDA_RS01595 24a8fe2ae8d427298a6b24bd9dad0c57 320 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 9 316 7.4E-112 T 23-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 BUMPUSDA_RS01595 24a8fe2ae8d427298a6b24bd9dad0c57 320 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 305 1.8E-48 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BUMPUSDA_RS02775 91645eca350dd7d6f9717183cb6e19c7 196 SUPERFAMILY SSF117916 108 190 5.45E-21 T 23-04-2016 BUMPUSDA_RS02775 91645eca350dd7d6f9717183cb6e19c7 196 SUPERFAMILY SSF89360 1 94 1.55E-16 T 23-04-2016 IPR000361 FeS cluster biogenesis BUMPUSDA_RS02775 91645eca350dd7d6f9717183cb6e19c7 196 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 123 182 3.0E-14 T 23-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 BUMPUSDA_RS02775 91645eca350dd7d6f9717183cb6e19c7 196 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 196 41.101 T 23-04-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 BUMPUSDA_RS02775 91645eca350dd7d6f9717183cb6e19c7 196 Pfam PF01106 NifU-like domain 116 182 6.5E-19 T 23-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 BUMPUSDA_RS02775 91645eca350dd7d6f9717183cb6e19c7 196 PANTHER PTHR10072:SF37 1 97 5.8E-57 T 23-04-2016 BUMPUSDA_RS02775 91645eca350dd7d6f9717183cb6e19c7 196 PANTHER PTHR10072:SF37 152 193 5.8E-57 T 23-04-2016 BUMPUSDA_RS02775 91645eca350dd7d6f9717183cb6e19c7 196 PANTHER PTHR10072 1 97 5.8E-57 T 23-04-2016 BUMPUSDA_RS02775 91645eca350dd7d6f9717183cb6e19c7 196 PANTHER PTHR10072 152 193 5.8E-57 T 23-04-2016 BUMPUSDA_RS02775 91645eca350dd7d6f9717183cb6e19c7 196 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 100 9.5E-9 T 23-04-2016 IPR000361 FeS cluster biogenesis BUMPUSDA_RS02775 91645eca350dd7d6f9717183cb6e19c7 196 Gene3D G3DSA:2.60.300.12 1 97 2.2E-13 T 23-04-2016 IPR000361 FeS cluster biogenesis BUMPUSDA_RS01080 d7501a384eaa4f1b39c109f2f796520a 305 Gene3D G3DSA:3.40.50.20 2 84 9.3E-28 T 23-04-2016 IPR016185 Pre-ATP-grasp domain BUMPUSDA_RS01080 d7501a384eaa4f1b39c109f2f796520a 305 Gene3D G3DSA:3.30.470.20 180 301 5.0E-46 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 BUMPUSDA_RS01080 d7501a384eaa4f1b39c109f2f796520a 305 Gene3D G3DSA:3.30.470.20 85 103 5.0E-46 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 BUMPUSDA_RS01080 d7501a384eaa4f1b39c109f2f796520a 305 SUPERFAMILY SSF52440 2 96 1.25E-27 T 23-04-2016 IPR016185 Pre-ATP-grasp domain BUMPUSDA_RS01080 d7501a384eaa4f1b39c109f2f796520a 305 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 63 74 - T 23-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 BUMPUSDA_RS01080 d7501a384eaa4f1b39c109f2f796520a 305 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 247 275 - T 23-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 BUMPUSDA_RS01080 d7501a384eaa4f1b39c109f2f796520a 305 Pfam PF01820 D-ala D-ala ligase N-terminus 4 86 2.2E-21 T 23-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 BUMPUSDA_RS01080 d7501a384eaa4f1b39c109f2f796520a 305 PIRSF PIRSF039102 44 305 7.5E-88 T 23-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 BUMPUSDA_RS01080 d7501a384eaa4f1b39c109f2f796520a 305 PANTHER PTHR23132 1 304 1.7E-80 T 23-04-2016 BUMPUSDA_RS01080 d7501a384eaa4f1b39c109f2f796520a 305 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 4 303 9.5E-100 T 23-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 BUMPUSDA_RS01080 d7501a384eaa4f1b39c109f2f796520a 305 Gene3D G3DSA:3.30.1490.20 109 179 5.9E-20 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 BUMPUSDA_RS01080 d7501a384eaa4f1b39c109f2f796520a 305 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 305 35.286 T 23-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 BUMPUSDA_RS01080 d7501a384eaa4f1b39c109f2f796520a 305 SUPERFAMILY SSF56059 96 301 8.42E-52 T 23-04-2016 BUMPUSDA_RS01080 d7501a384eaa4f1b39c109f2f796520a 305 Pfam PF07478 D-ala D-ala ligase C-terminus 103 301 6.1E-59 T 23-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 BUMPUSDA_RS01910 8453e73c48ee1f31cc458817c1cf04a4 127 ProSitePatterns PS01319 Ribosome-binding factor A signature. 79 100 - T 23-04-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 BUMPUSDA_RS01910 8453e73c48ee1f31cc458817c1cf04a4 127 Gene3D G3DSA:3.30.300.20 4 121 1.2E-32 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta BUMPUSDA_RS01910 8453e73c48ee1f31cc458817c1cf04a4 127 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 120 20.961 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 BUMPUSDA_RS01910 8453e73c48ee1f31cc458817c1cf04a4 127 Pfam PF02033 Ribosome-binding factor A 7 113 2.3E-28 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 BUMPUSDA_RS01910 8453e73c48ee1f31cc458817c1cf04a4 127 SUPERFAMILY SSF89919 3 107 7.85E-30 T 23-04-2016 IPR023799 Ribosome-binding factor A domain BUMPUSDA_RS01910 8453e73c48ee1f31cc458817c1cf04a4 127 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 10 100 1.0E-32 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 BUMPUSDA_RS01910 8453e73c48ee1f31cc458817c1cf04a4 127 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 118 3.3E-30 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 BUMPUSDA_RS01910 8453e73c48ee1f31cc458817c1cf04a4 127 PANTHER PTHR33515 1 121 7.6E-31 T 23-04-2016 BUMPUSDA_RS02610 1bf1f01fdd272a5cceed51f1fa6a40d0 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 42.589 T 23-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02610 1bf1f01fdd272a5cceed51f1fa6a40d0 179 PIRSF PIRSF002161 1 179 3.7E-62 T 23-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS02610 1bf1f01fdd272a5cceed51f1fa6a40d0 179 PANTHER PTHR11994 1 178 5.9E-89 T 23-04-2016 BUMPUSDA_RS02610 1bf1f01fdd272a5cceed51f1fa6a40d0 179 SUPERFAMILY SSF55282 4 179 2.59E-74 T 23-04-2016 IPR022803 Ribosomal protein L5 domain BUMPUSDA_RS02610 1bf1f01fdd272a5cceed51f1fa6a40d0 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 23-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02610 1bf1f01fdd272a5cceed51f1fa6a40d0 179 Gene3D G3DSA:3.30.1440.10 3 179 7.5E-74 T 23-04-2016 IPR022803 Ribosomal protein L5 domain BUMPUSDA_RS02610 1bf1f01fdd272a5cceed51f1fa6a40d0 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 4.8E-38 T 23-04-2016 IPR031309 Ribosomal protein L5, C-terminal BUMPUSDA_RS02610 1bf1f01fdd272a5cceed51f1fa6a40d0 179 Pfam PF00281 Ribosomal protein L5 25 80 2.8E-27 T 23-04-2016 IPR031310 Ribosomal protein L5, N-terminal BUMPUSDA_RS00695 23353d7c60aae53bafedfaca324ba9dd 94 Gene3D G3DSA:2.40.240.10 2 93 7.5E-26 T 23-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 BUMPUSDA_RS00695 23353d7c60aae53bafedfaca324ba9dd 94 Pfam PF01386 Ribosomal L25p family 4 91 2.4E-18 T 23-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 BUMPUSDA_RS00695 23353d7c60aae53bafedfaca324ba9dd 94 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 2 94 25.617 T 23-04-2016 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 BUMPUSDA_RS00695 23353d7c60aae53bafedfaca324ba9dd 94 SUPERFAMILY SSF50715 1 93 1.08E-25 T 23-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 BUMPUSDA_RS00695 23353d7c60aae53bafedfaca324ba9dd 94 PANTHER PTHR33284 1 92 3.8E-26 T 23-04-2016 BUMPUSDA_RS00695 23353d7c60aae53bafedfaca324ba9dd 94 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 2 91 6.0E-32 T 23-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 BUMPUSDA_RS01950 63748af4ade5fbfed4d53c239808fc3a 88 Gene3D G3DSA:3.30.300.90 1 80 3.8E-19 T 23-04-2016 IPR002634 BolA protein BUMPUSDA_RS01950 63748af4ade5fbfed4d53c239808fc3a 88 PANTHER PTHR12735 25 78 1.4E-12 T 23-04-2016 BUMPUSDA_RS01950 63748af4ade5fbfed4d53c239808fc3a 88 PIRSF PIRSF003113 1 88 4.4E-17 T 23-04-2016 IPR002634 BolA protein BUMPUSDA_RS01950 63748af4ade5fbfed4d53c239808fc3a 88 Pfam PF01722 BolA-like protein 22 74 1.0E-8 T 23-04-2016 IPR002634 BolA protein BUMPUSDA_RS01950 63748af4ade5fbfed4d53c239808fc3a 88 SUPERFAMILY SSF82657 2 81 4.84E-22 T 23-04-2016 IPR002634 BolA protein BUMPUSDA_RS01950 63748af4ade5fbfed4d53c239808fc3a 88 PANTHER PTHR12735:SF24 25 78 1.4E-12 T 23-04-2016 BUMPUSDA_RS01155 442ad4e831435a4a30d3531419fb1c70 274 Gene3D G3DSA:2.160.10.10 92 255 1.7E-57 T 23-04-2016 BUMPUSDA_RS01155 442ad4e831435a4a30d3531419fb1c70 274 Gene3D G3DSA:1.10.166.10 1 69 1.2E-22 T 23-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 BUMPUSDA_RS01155 442ad4e831435a4a30d3531419fb1c70 274 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 55.143 T 23-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 BUMPUSDA_RS01155 442ad4e831435a4a30d3531419fb1c70 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 BUMPUSDA_RS01155 442ad4e831435a4a30d3531419fb1c70 274 PANTHER PTHR19136:SF52 13 274 3.9E-120 T 23-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 BUMPUSDA_RS01155 442ad4e831435a4a30d3531419fb1c70 274 SUPERFAMILY SSF51161 4 256 2.77E-70 T 23-04-2016 IPR011004 Trimeric LpxA-like BUMPUSDA_RS01155 442ad4e831435a4a30d3531419fb1c70 274 PANTHER PTHR19136 13 274 3.9E-120 T 23-04-2016 BUMPUSDA_RS01155 442ad4e831435a4a30d3531419fb1c70 274 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 1.1E-12 T 23-04-2016 IPR001451 Hexapeptide repeat BUMPUSDA_RS01155 442ad4e831435a4a30d3531419fb1c70 274 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 273 8.4E-134 T 23-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 BUMPUSDA_RS01155 442ad4e831435a4a30d3531419fb1c70 274 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 4 68 5.9E-19 T 23-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 BUMPUSDA_RS01670 055011194daca8622bdcc59d8245ddf9 237 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 6 236 4.8E-80 T 23-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 BUMPUSDA_RS01670 055011194daca8622bdcc59d8245ddf9 237 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 103 1.3E-35 T 23-04-2016 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 BUMPUSDA_RS01670 055011194daca8622bdcc59d8245ddf9 237 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 5 237 28.327 T 23-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 BUMPUSDA_RS01670 055011194daca8622bdcc59d8245ddf9 237 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 134 233 2.9E-28 T 23-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 BUMPUSDA_RS01670 055011194daca8622bdcc59d8245ddf9 237 PANTHER PTHR34108 1 237 1.4E-51 T 23-04-2016 BUMPUSDA_RS01670 055011194daca8622bdcc59d8245ddf9 237 PANTHER PTHR34108:SF1 1 237 1.4E-51 T 23-04-2016 BUMPUSDA_RS01670 055011194daca8622bdcc59d8245ddf9 237 Gene3D G3DSA:2.160.20.70 125 236 3.8E-34 T 23-04-2016 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 BUMPUSDA_RS01670 055011194daca8622bdcc59d8245ddf9 237 SUPERFAMILY SSF63848 130 236 8.76E-30 T 23-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 BUMPUSDA_RS01725 65424df808b21d3e55b8d0805acc4281 220 Pfam PF13861 FlgD Tudor-like domain 87 216 9.1E-12 T 23-04-2016 IPR025963 FlgD Tudor-like domain BUMPUSDA_RS01725 65424df808b21d3e55b8d0805acc4281 220 PANTHER PTHR30435 3 219 3.1E-28 T 23-04-2016 BUMPUSDA_RS01725 65424df808b21d3e55b8d0805acc4281 220 Pfam PF03963 Flagellar hook capping protein - N-terminal region 30 77 2.5E-16 T 23-04-2016 IPR005648 Flagellar hook capping protein BUMPUSDA_RS01725 65424df808b21d3e55b8d0805acc4281 220 Pfam PF13860 FlgD Ig-like domain 109 176 3.0E-8 T 23-04-2016 IPR025965 FlgD Ig-like domain BUMPUSDA_RS01725 65424df808b21d3e55b8d0805acc4281 220 PANTHER PTHR30435:SF15 3 219 3.1E-28 T 23-04-2016 BUMPUSDA_RS01960 d5ec8948861e51e06e0cbc80b0a55c90 114 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 104 23.756 T 23-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS01960 d5ec8948861e51e06e0cbc80b0a55c90 114 SUPERFAMILY SSF141091 1 103 7.72E-29 T 23-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 BUMPUSDA_RS01960 d5ec8948861e51e06e0cbc80b0a55c90 114 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 102 8.3E-34 T 23-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS01960 d5ec8948861e51e06e0cbc80b0a55c90 114 ProSitePatterns PS01169 Ribosomal protein L21 signature. 73 95 - T 23-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS01960 d5ec8948861e51e06e0cbc80b0a55c90 114 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 102 8.3E-31 T 23-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 BUMPUSDA_RS01960 d5ec8948861e51e06e0cbc80b0a55c90 114 PANTHER PTHR21349 1 102 6.5E-26 T 23-04-2016 BUMPUSDA_RS02835 b9c34275cad1902a1467728708e46fe0 102 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 8 102 24.869 T 23-04-2016 IPR007458 Protein of unknown function DUF496 BUMPUSDA_RS02835 b9c34275cad1902a1467728708e46fe0 102 PANTHER PTHR39591 1 98 4.8E-46 T 23-04-2016 BUMPUSDA_RS02835 b9c34275cad1902a1467728708e46fe0 102 Pfam PF04363 Protein of unknown function (DUF496) 8 98 4.9E-43 T 23-04-2016 IPR007458 Protein of unknown function DUF496 BUMPUSDA_RS02835 b9c34275cad1902a1467728708e46fe0 102 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 10 98 3.0E-40 T 23-04-2016 IPR007458 Protein of unknown function DUF496 BUMPUSDA_RS02835 b9c34275cad1902a1467728708e46fe0 102 PIRSF PIRSF028773 1 102 7.2E-49 T 23-04-2016 IPR007458 Protein of unknown function DUF496 BUMPUSDA_RS01475 0ef51ff9db83d6e5ebe91698c71b53a9 428 Gene3D G3DSA:3.40.640.10 62 329 3.8E-85 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 BUMPUSDA_RS01475 0ef51ff9db83d6e5ebe91698c71b53a9 428 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 424 49.414 T 23-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 BUMPUSDA_RS01475 0ef51ff9db83d6e5ebe91698c71b53a9 428 Gene3D G3DSA:3.90.1150.10 332 423 2.2E-53 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 BUMPUSDA_RS01475 0ef51ff9db83d6e5ebe91698c71b53a9 428 Gene3D G3DSA:3.90.1150.10 3 61 2.2E-53 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 BUMPUSDA_RS01475 0ef51ff9db83d6e5ebe91698c71b53a9 428 SUPERFAMILY SSF53383 1 423 1.33E-120 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase BUMPUSDA_RS01475 0ef51ff9db83d6e5ebe91698c71b53a9 428 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 242 279 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BUMPUSDA_RS01475 0ef51ff9db83d6e5ebe91698c71b53a9 428 PANTHER PTHR11986:SF8 2 428 4.0E-190 T 23-04-2016 BUMPUSDA_RS01475 0ef51ff9db83d6e5ebe91698c71b53a9 428 PANTHER PTHR11986 2 428 4.0E-190 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BUMPUSDA_RS01475 0ef51ff9db83d6e5ebe91698c71b53a9 428 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 13 421 2.7E-170 T 23-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 BUMPUSDA_RS01475 0ef51ff9db83d6e5ebe91698c71b53a9 428 Pfam PF00202 Aminotransferase class-III 27 421 8.1E-117 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BUMPUSDA_RS00370 f3ec690e65e18732cbe156150c6f9e34 551 PRINTS PR01009 Flagellar M-ring protein signature 157 171 6.7E-39 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BUMPUSDA_RS00370 f3ec690e65e18732cbe156150c6f9e34 551 PRINTS PR01009 Flagellar M-ring protein signature 200 218 6.7E-39 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BUMPUSDA_RS00370 f3ec690e65e18732cbe156150c6f9e34 551 PRINTS PR01009 Flagellar M-ring protein signature 269 287 6.7E-39 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BUMPUSDA_RS00370 f3ec690e65e18732cbe156150c6f9e34 551 PRINTS PR01009 Flagellar M-ring protein signature 125 143 6.7E-39 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BUMPUSDA_RS00370 f3ec690e65e18732cbe156150c6f9e34 551 PRINTS PR01009 Flagellar M-ring protein signature 364 388 6.7E-39 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BUMPUSDA_RS00370 f3ec690e65e18732cbe156150c6f9e34 551 Pfam PF01514 Secretory protein of YscJ/FliF family 36 224 3.6E-69 T 23-04-2016 IPR006182 Secretory protein YscJ/FliF BUMPUSDA_RS00370 f3ec690e65e18732cbe156150c6f9e34 551 PIRSF PIRSF004862 7 551 3.0E-128 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BUMPUSDA_RS00370 f3ec690e65e18732cbe156150c6f9e34 551 PANTHER PTHR30046 5 327 6.1E-130 T 23-04-2016 BUMPUSDA_RS00370 f3ec690e65e18732cbe156150c6f9e34 551 PANTHER PTHR30046 347 550 6.1E-130 T 23-04-2016 BUMPUSDA_RS00370 f3ec690e65e18732cbe156150c6f9e34 551 PANTHER PTHR30046:SF0 5 327 6.1E-130 T 23-04-2016 BUMPUSDA_RS00370 f3ec690e65e18732cbe156150c6f9e34 551 PANTHER PTHR30046:SF0 347 550 6.1E-130 T 23-04-2016 BUMPUSDA_RS00370 f3ec690e65e18732cbe156150c6f9e34 551 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 9 549 3.0E-110 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BUMPUSDA_RS00370 f3ec690e65e18732cbe156150c6f9e34 551 Pfam PF08345 Flagellar M-ring protein C-terminal 256 436 5.4E-37 T 23-04-2016 IPR013556 Flagellar M-ring C-terminal BUMPUSDA_RS00840 21876da434ee4516b096e37ef461160b 318 PANTHER PTHR30238 5 312 2.2E-80 T 23-04-2016 BUMPUSDA_RS00840 21876da434ee4516b096e37ef461160b 318 PANTHER PTHR30238:SF0 5 312 2.2E-80 T 23-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 BUMPUSDA_RS00840 21876da434ee4516b096e37ef461160b 318 Pfam PF03741 Integral membrane protein TerC family 81 284 4.9E-46 T 23-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 BUMPUSDA_RS00840 21876da434ee4516b096e37ef461160b 318 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 8 309 4.5E-76 T 23-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 BUMPUSDA_RS00885 505bc8a1b5003bb2235960170d2bab36 401 TIGRFAM TIGR00016 ackA: acetate kinase 3 398 6.6E-155 T 23-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 BUMPUSDA_RS00885 505bc8a1b5003bb2235960170d2bab36 401 Hamap MF_00020 Acetate kinase [ackA]. 1 401 162.342 T 23-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 BUMPUSDA_RS00885 505bc8a1b5003bb2235960170d2bab36 401 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 205 222 - T 23-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 BUMPUSDA_RS00885 505bc8a1b5003bb2235960170d2bab36 401 Pfam PF00871 Acetokinase family 5 392 4.0E-149 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 BUMPUSDA_RS00885 505bc8a1b5003bb2235960170d2bab36 401 SUPERFAMILY SSF53067 160 398 3.7E-82 T 23-04-2016 BUMPUSDA_RS00885 505bc8a1b5003bb2235960170d2bab36 401 PIRSF PIRSF000722 1 401 2.9E-135 T 23-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 BUMPUSDA_RS00885 505bc8a1b5003bb2235960170d2bab36 401 SUPERFAMILY SSF53067 4 197 9.71E-57 T 23-04-2016 BUMPUSDA_RS00885 505bc8a1b5003bb2235960170d2bab36 401 PANTHER PTHR21060:SF15 1 399 1.6E-199 T 23-04-2016 BUMPUSDA_RS00885 505bc8a1b5003bb2235960170d2bab36 401 PRINTS PR00471 Acetate kinase family signature 324 340 4.2E-41 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 BUMPUSDA_RS00885 505bc8a1b5003bb2235960170d2bab36 401 PRINTS PR00471 Acetate kinase family signature 205 226 4.2E-41 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 BUMPUSDA_RS00885 505bc8a1b5003bb2235960170d2bab36 401 PRINTS PR00471 Acetate kinase family signature 301 314 4.2E-41 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 BUMPUSDA_RS00885 505bc8a1b5003bb2235960170d2bab36 401 PRINTS PR00471 Acetate kinase family signature 5 16 4.2E-41 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 BUMPUSDA_RS00885 505bc8a1b5003bb2235960170d2bab36 401 PRINTS PR00471 Acetate kinase family signature 379 391 4.2E-41 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 BUMPUSDA_RS00885 505bc8a1b5003bb2235960170d2bab36 401 PRINTS PR00471 Acetate kinase family signature 175 188 4.2E-41 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 BUMPUSDA_RS00885 505bc8a1b5003bb2235960170d2bab36 401 PANTHER PTHR21060 1 399 1.6E-199 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 BUMPUSDA_RS00885 505bc8a1b5003bb2235960170d2bab36 401 Gene3D G3DSA:3.30.420.40 53 206 5.6E-7 T 23-04-2016 BUMPUSDA_RS00885 505bc8a1b5003bb2235960170d2bab36 401 Gene3D G3DSA:3.30.420.40 207 397 7.8E-69 T 23-04-2016 BUMPUSDA_RS01570 46102365063cc1ddbdd7456ffcd3869a 95 SUPERFAMILY SSF52540 1 88 1.82E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01570 46102365063cc1ddbdd7456ffcd3869a 95 Pfam PF02224 Cytidylate kinase 1 87 1.9E-24 T 23-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 BUMPUSDA_RS01570 46102365063cc1ddbdd7456ffcd3869a 95 PANTHER PTHR21299 1 81 2.2E-20 T 23-04-2016 BUMPUSDA_RS01570 46102365063cc1ddbdd7456ffcd3869a 95 Gene3D G3DSA:3.40.50.300 1 86 2.8E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS00090 e2ef39df08df4fc6bb5374eb6560df33 96 PANTHER PTHR10772 1 96 2.5E-39 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BUMPUSDA_RS00090 e2ef39df08df4fc6bb5374eb6560df33 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 23-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 BUMPUSDA_RS00090 e2ef39df08df4fc6bb5374eb6560df33 96 SUPERFAMILY SSF50129 1 96 1.06E-30 T 23-04-2016 IPR011032 GroES-like BUMPUSDA_RS00090 e2ef39df08df4fc6bb5374eb6560df33 96 PRINTS PR00297 10kDa chaperonin signature 82 95 1.3E-26 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BUMPUSDA_RS00090 e2ef39df08df4fc6bb5374eb6560df33 96 PRINTS PR00297 10kDa chaperonin signature 25 46 1.3E-26 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BUMPUSDA_RS00090 e2ef39df08df4fc6bb5374eb6560df33 96 PRINTS PR00297 10kDa chaperonin signature 3 18 1.3E-26 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BUMPUSDA_RS00090 e2ef39df08df4fc6bb5374eb6560df33 96 PRINTS PR00297 10kDa chaperonin signature 60 72 1.3E-26 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BUMPUSDA_RS00090 e2ef39df08df4fc6bb5374eb6560df33 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 23.468 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BUMPUSDA_RS00090 e2ef39df08df4fc6bb5374eb6560df33 96 Gene3D G3DSA:2.30.33.40 1 96 3.7E-32 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BUMPUSDA_RS00090 e2ef39df08df4fc6bb5374eb6560df33 96 SMART SM00883 2 95 8.6E-48 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BUMPUSDA_RS00090 e2ef39df08df4fc6bb5374eb6560df33 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 4.5E-30 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BUMPUSDA_RS01025 0981ade2ef3318e5fb945793f812ab65 217 SUPERFAMILY SSF52540 1 187 3.24E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01025 0981ade2ef3318e5fb945793f812ab65 217 Pfam PF01121 Dephospho-CoA kinase 3 180 1.9E-54 T 23-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 BUMPUSDA_RS01025 0981ade2ef3318e5fb945793f812ab65 217 Gene3D G3DSA:3.40.50.300 1 184 3.3E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01025 0981ade2ef3318e5fb945793f812ab65 217 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 184 9.5E-48 T 23-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 BUMPUSDA_RS01025 0981ade2ef3318e5fb945793f812ab65 217 PANTHER PTHR10695 1 175 3.2E-49 T 23-04-2016 BUMPUSDA_RS01025 0981ade2ef3318e5fb945793f812ab65 217 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 192 22.44 T 23-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 BUMPUSDA_RS00770 2107ad6a15c691765b74a5927ed43bfa 637 Gene3D G3DSA:3.30.420.40 197 229 5.8E-34 T 23-04-2016 BUMPUSDA_RS00770 2107ad6a15c691765b74a5927ed43bfa 637 Gene3D G3DSA:3.30.420.40 319 361 5.8E-34 T 23-04-2016 BUMPUSDA_RS00770 2107ad6a15c691765b74a5927ed43bfa 637 PANTHER PTHR19375:SF173 2 634 0.0 T 23-04-2016 BUMPUSDA_RS00770 2107ad6a15c691765b74a5927ed43bfa 637 SUPERFAMILY SSF53067 187 382 8.19E-66 T 23-04-2016 BUMPUSDA_RS00770 2107ad6a15c691765b74a5927ed43bfa 637 Gene3D G3DSA:3.30.420.40 4 52 2.4E-64 T 23-04-2016 BUMPUSDA_RS00770 2107ad6a15c691765b74a5927ed43bfa 637 Gene3D G3DSA:3.30.420.40 119 196 2.4E-64 T 23-04-2016 BUMPUSDA_RS00770 2107ad6a15c691765b74a5927ed43bfa 637 PRINTS PR00301 70kDa heat shock protein signature 138 158 4.8E-79 T 23-04-2016 IPR013126 Heat shock protein 70 family BUMPUSDA_RS00770 2107ad6a15c691765b74a5927ed43bfa 637 PRINTS PR00301 70kDa heat shock protein signature 31 43 4.8E-79 T 23-04-2016 IPR013126 Heat shock protein 70 family BUMPUSDA_RS00770 2107ad6a15c691765b74a5927ed43bfa 637 PRINTS PR00301 70kDa heat shock protein signature 198 208 4.8E-79 T 23-04-2016 IPR013126 Heat shock protein 70 family BUMPUSDA_RS00770 2107ad6a15c691765b74a5927ed43bfa 637 PRINTS PR00301 70kDa heat shock protein signature 334 350 4.8E-79 T 23-04-2016 IPR013126 Heat shock protein 70 family BUMPUSDA_RS00770 2107ad6a15c691765b74a5927ed43bfa 637 PRINTS PR00301 70kDa heat shock protein signature 54 62 4.8E-79 T 23-04-2016 IPR013126 Heat shock protein 70 family BUMPUSDA_RS00770 2107ad6a15c691765b74a5927ed43bfa 637 PRINTS PR00301 70kDa heat shock protein signature 388 407 4.8E-79 T 23-04-2016 IPR013126 Heat shock protein 70 family BUMPUSDA_RS00770 2107ad6a15c691765b74a5927ed43bfa 637 PRINTS PR00301 70kDa heat shock protein signature 365 385 4.8E-79 T 23-04-2016 IPR013126 Heat shock protein 70 family BUMPUSDA_RS00770 2107ad6a15c691765b74a5927ed43bfa 637 PRINTS PR00301 70kDa heat shock protein signature 3 16 4.8E-79 T 23-04-2016 IPR013126 Heat shock protein 70 family BUMPUSDA_RS00770 2107ad6a15c691765b74a5927ed43bfa 637 PRINTS PR00301 70kDa heat shock protein signature 469 485 4.8E-79 T 23-04-2016 IPR013126 Heat shock protein 70 family BUMPUSDA_RS00770 2107ad6a15c691765b74a5927ed43bfa 637 SUPERFAMILY SSF100920 384 539 6.15E-60 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain BUMPUSDA_RS00770 2107ad6a15c691765b74a5927ed43bfa 637 Gene3D G3DSA:3.30.30.30 53 107 8.0E-28 T 23-04-2016 BUMPUSDA_RS00770 2107ad6a15c691765b74a5927ed43bfa 637 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 601 1.5E-286 T 23-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 BUMPUSDA_RS00770 2107ad6a15c691765b74a5927ed43bfa 637 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site BUMPUSDA_RS00770 2107ad6a15c691765b74a5927ed43bfa 637 Gene3D G3DSA:1.20.1270.10 532 599 5.1E-19 T 23-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain BUMPUSDA_RS00770 2107ad6a15c691765b74a5927ed43bfa 637 Gene3D G3DSA:3.90.640.10 230 313 5.6E-30 T 23-04-2016 BUMPUSDA_RS00770 2107ad6a15c691765b74a5927ed43bfa 637 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site BUMPUSDA_RS00770 2107ad6a15c691765b74a5927ed43bfa 637 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site BUMPUSDA_RS00770 2107ad6a15c691765b74a5927ed43bfa 637 Pfam PF00012 Hsp70 protein 4 600 5.8E-262 T 23-04-2016 IPR013126 Heat shock protein 70 family BUMPUSDA_RS00770 2107ad6a15c691765b74a5927ed43bfa 637 SUPERFAMILY SSF100934 507 601 5.62E-18 T 23-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain BUMPUSDA_RS00770 2107ad6a15c691765b74a5927ed43bfa 637 SUPERFAMILY SSF53067 4 184 1.38E-66 T 23-04-2016 BUMPUSDA_RS00770 2107ad6a15c691765b74a5927ed43bfa 637 Gene3D G3DSA:2.60.34.10 390 531 3.4E-68 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain BUMPUSDA_RS00770 2107ad6a15c691765b74a5927ed43bfa 637 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 632 36.228 T 23-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 BUMPUSDA_RS00770 2107ad6a15c691765b74a5927ed43bfa 637 PANTHER PTHR19375 2 634 0.0 T 23-04-2016 BUMPUSDA_RS00025 04f4290cb25b65a45463269121b40265 177 PANTHER PTHR11910:SF1 8 176 2.2E-33 T 23-04-2016 BUMPUSDA_RS00025 04f4290cb25b65a45463269121b40265 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 1.1E-47 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 BUMPUSDA_RS00025 04f4290cb25b65a45463269121b40265 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 9.6E-40 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 BUMPUSDA_RS00025 04f4290cb25b65a45463269121b40265 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 17.078 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 BUMPUSDA_RS00025 04f4290cb25b65a45463269121b40265 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 4.1E-24 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 BUMPUSDA_RS00025 04f4290cb25b65a45463269121b40265 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 4.1E-24 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 BUMPUSDA_RS00025 04f4290cb25b65a45463269121b40265 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 4.1E-24 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 BUMPUSDA_RS00025 04f4290cb25b65a45463269121b40265 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 4.1E-24 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 BUMPUSDA_RS00025 04f4290cb25b65a45463269121b40265 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 4.1E-24 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 BUMPUSDA_RS00025 04f4290cb25b65a45463269121b40265 177 PANTHER PTHR11910 8 176 2.2E-33 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 BUMPUSDA_RS00025 04f4290cb25b65a45463269121b40265 177 SUPERFAMILY SSF47928 5 105 8.76E-23 T 23-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain BUMPUSDA_RS00025 04f4290cb25b65a45463269121b40265 177 Gene3D G3DSA:1.10.520.20 6 105 4.3E-25 T 23-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain BUMPUSDA_RS01430 ae6570d6700b538e8e5990927ccaba23 345 Pfam PF01343 Peptidase family S49 159 306 2.0E-43 T 23-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 BUMPUSDA_RS01430 ae6570d6700b538e8e5990927ccaba23 345 PANTHER PTHR33209 2 338 1.5E-158 T 23-04-2016 BUMPUSDA_RS01430 ae6570d6700b538e8e5990927ccaba23 345 Gene3D G3DSA:3.90.226.10 269 305 3.1E-30 T 23-04-2016 IPR029045 ClpP/crotonase-like domain BUMPUSDA_RS01430 ae6570d6700b538e8e5990927ccaba23 345 Gene3D G3DSA:3.90.226.10 98 203 3.1E-30 T 23-04-2016 IPR029045 ClpP/crotonase-like domain BUMPUSDA_RS01430 ae6570d6700b538e8e5990927ccaba23 345 SUPERFAMILY SSF52096 102 207 4.97E-25 T 23-04-2016 IPR029045 ClpP/crotonase-like domain BUMPUSDA_RS01430 ae6570d6700b538e8e5990927ccaba23 345 SUPERFAMILY SSF52096 238 297 4.97E-25 T 23-04-2016 IPR029045 ClpP/crotonase-like domain BUMPUSDA_RS01430 ae6570d6700b538e8e5990927ccaba23 345 PANTHER PTHR33209:SF2 2 338 1.5E-158 T 23-04-2016 BUMPUSDA_RS01430 ae6570d6700b538e8e5990927ccaba23 345 Pfam PF08496 Peptidase family S49 N-terminal 3 156 2.6E-50 T 23-04-2016 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 BUMPUSDA_RS01445 08f22e8da1a2764a021ac24b323b0910 361 Gene3D G3DSA:3.20.20.70 109 307 1.1E-15 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 BUMPUSDA_RS01445 08f22e8da1a2764a021ac24b323b0910 361 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 11 358 7.7E-133 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 BUMPUSDA_RS01445 08f22e8da1a2764a021ac24b323b0910 361 SUPERFAMILY SSF102114 110 307 2.35E-15 T 23-04-2016 BUMPUSDA_RS01445 08f22e8da1a2764a021ac24b323b0910 361 PIRSF PIRSF006004 8 361 7.3E-137 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 BUMPUSDA_RS01445 08f22e8da1a2764a021ac24b323b0910 361 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 13 358 67.578 T 23-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 BUMPUSDA_RS01445 08f22e8da1a2764a021ac24b323b0910 361 PANTHER PTHR30544 1 361 3.0E-156 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 BUMPUSDA_RS01445 08f22e8da1a2764a021ac24b323b0910 361 Pfam PF04055 Radical SAM superfamily 116 283 7.3E-16 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 BUMPUSDA_RS01445 08f22e8da1a2764a021ac24b323b0910 361 Pfam PF13394 4Fe-4S single cluster domain 120 211 3.4E-6 T 23-04-2016 BUMPUSDA_RS01445 08f22e8da1a2764a021ac24b323b0910 361 PANTHER PTHR30544:SF5 1 361 3.0E-156 T 23-04-2016 BUMPUSDA_RS00305 8f60eadcc1f8e3e013f40785d724c768 315 SUPERFAMILY SSF53613 13 308 7.17E-51 T 23-04-2016 IPR029056 Ribokinase-like BUMPUSDA_RS00305 8f60eadcc1f8e3e013f40785d724c768 315 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 23-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 BUMPUSDA_RS00305 8f60eadcc1f8e3e013f40785d724c768 315 PANTHER PTHR10584:SF159 1 309 1.6E-100 T 23-04-2016 BUMPUSDA_RS00305 8f60eadcc1f8e3e013f40785d724c768 315 Pfam PF00294 pfkB family carbohydrate kinase 12 302 5.1E-44 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB BUMPUSDA_RS00305 8f60eadcc1f8e3e013f40785d724c768 315 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 6 309 2.5E-116 T 23-04-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 BUMPUSDA_RS00305 8f60eadcc1f8e3e013f40785d724c768 315 Gene3D G3DSA:3.40.1190.20 13 309 7.0E-53 T 23-04-2016 IPR029056 Ribokinase-like BUMPUSDA_RS00305 8f60eadcc1f8e3e013f40785d724c768 315 PANTHER PTHR10584 1 309 1.6E-100 T 23-04-2016 BUMPUSDA_RS00570 fd58856793bd388ca085ca83e25c8375 165 Pfam PF14697 4Fe-4S dicluster domain 108 159 8.8E-13 T 23-04-2016 BUMPUSDA_RS00570 fd58856793bd388ca085ca83e25c8375 165 SUPERFAMILY SSF54862 33 163 8.79E-26 T 23-04-2016 BUMPUSDA_RS00570 fd58856793bd388ca085ca83e25c8375 165 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 3 162 7.9E-67 T 23-04-2016 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 BUMPUSDA_RS00570 fd58856793bd388ca085ca83e25c8375 165 Pfam PF04060 Putative Fe-S cluster 40 72 1.0E-11 T 23-04-2016 IPR007202 4Fe-4S domain GO:0051536 BUMPUSDA_RS00570 fd58856793bd388ca085ca83e25c8375 165 PIRSF PIRSF005784 1 164 1.9E-67 T 23-04-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 BUMPUSDA_RS00570 fd58856793bd388ca085ca83e25c8375 165 Hamap MF_00463 Electron transport complex subunit RsxB [rsxB]. 1 164 30.428 T 23-04-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 BUMPUSDA_RS00570 fd58856793bd388ca085ca83e25c8375 165 PANTHER PTHR11938:SF64 4 161 1.6E-45 T 23-04-2016 BUMPUSDA_RS00570 fd58856793bd388ca085ca83e25c8375 165 PANTHER PTHR11938 4 161 1.6E-45 T 23-04-2016 BUMPUSDA_RS00570 fd58856793bd388ca085ca83e25c8375 165 Gene3D G3DSA:3.30.70.20 97 163 1.1E-13 T 23-04-2016 BUMPUSDA_RS00570 fd58856793bd388ca085ca83e25c8375 165 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 113 124 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BUMPUSDA_RS00570 fd58856793bd388ca085ca83e25c8375 165 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 143 154 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BUMPUSDA_RS00570 fd58856793bd388ca085ca83e25c8375 165 Gene3D G3DSA:3.30.70.20 42 66 1.5E-5 T 23-04-2016 BUMPUSDA_RS00005 cf6f22f60ba1aab9ee42743efeff2c50 628 Pfam PF13932 GidA associated domain 402 616 4.4E-67 T 23-04-2016 IPR026904 GidA associated domain 3 BUMPUSDA_RS00005 cf6f22f60ba1aab9ee42743efeff2c50 628 SUPERFAMILY SSF51905 97 261 2.4E-45 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BUMPUSDA_RS00005 cf6f22f60ba1aab9ee42743efeff2c50 628 SUPERFAMILY SSF51905 6 66 2.4E-45 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BUMPUSDA_RS00005 cf6f22f60ba1aab9ee42743efeff2c50 628 Gene3D G3DSA:3.50.50.60 7 231 6.1E-40 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BUMPUSDA_RS00005 cf6f22f60ba1aab9ee42743efeff2c50 628 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 7.5E-268 T 23-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 BUMPUSDA_RS00005 cf6f22f60ba1aab9ee42743efeff2c50 628 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 23-04-2016 IPR020595 MnmG-related, conserved site BUMPUSDA_RS00005 cf6f22f60ba1aab9ee42743efeff2c50 628 PANTHER PTHR11806 5 626 0.0 T 23-04-2016 BUMPUSDA_RS00005 cf6f22f60ba1aab9ee42743efeff2c50 628 PANTHER PTHR11806:SF0 5 626 0.0 T 23-04-2016 BUMPUSDA_RS00005 cf6f22f60ba1aab9ee42743efeff2c50 628 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 40.664 T 23-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 BUMPUSDA_RS00005 cf6f22f60ba1aab9ee42743efeff2c50 628 SMART SM01228 546 617 8.8E-34 T 23-04-2016 BUMPUSDA_RS00005 cf6f22f60ba1aab9ee42743efeff2c50 628 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 23-04-2016 IPR020595 MnmG-related, conserved site BUMPUSDA_RS00005 cf6f22f60ba1aab9ee42743efeff2c50 628 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.1E-5 T 23-04-2016 BUMPUSDA_RS00005 cf6f22f60ba1aab9ee42743efeff2c50 628 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 151 160 1.1E-5 T 23-04-2016 BUMPUSDA_RS00005 cf6f22f60ba1aab9ee42743efeff2c50 628 Pfam PF01134 Glucose inhibited division protein A 8 398 8.0E-161 T 23-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 BUMPUSDA_RS01070 440407b534d5b8764a91766275a687c3 386 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 326 9.0E-137 T 23-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 BUMPUSDA_RS01070 440407b534d5b8764a91766275a687c3 386 PRINTS PR00423 Cell division protein FtsZ signature 125 146 4.12E-51 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 BUMPUSDA_RS01070 440407b534d5b8764a91766275a687c3 386 PRINTS PR00423 Cell division protein FtsZ signature 97 117 4.12E-51 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 BUMPUSDA_RS01070 440407b534d5b8764a91766275a687c3 386 PRINTS PR00423 Cell division protein FtsZ signature 188 210 4.12E-51 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 BUMPUSDA_RS01070 440407b534d5b8764a91766275a687c3 386 PRINTS PR00423 Cell division protein FtsZ signature 211 232 4.12E-51 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 BUMPUSDA_RS01070 440407b534d5b8764a91766275a687c3 386 SUPERFAMILY SSF52490 13 207 1.96E-69 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 BUMPUSDA_RS01070 440407b534d5b8764a91766275a687c3 386 SMART SM00865 206 324 9.1E-55 T 23-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain BUMPUSDA_RS01070 440407b534d5b8764a91766275a687c3 386 PANTHER PTHR30314 1 384 4.4E-194 T 23-04-2016 BUMPUSDA_RS01070 440407b534d5b8764a91766275a687c3 386 ProSitePatterns PS01134 FtsZ protein signature 1. 43 77 - T 23-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 BUMPUSDA_RS01070 440407b534d5b8764a91766275a687c3 386 SUPERFAMILY SSF55307 203 318 1.74E-40 T 23-04-2016 IPR008280 Tubulin/FtsZ, C-terminal BUMPUSDA_RS01070 440407b534d5b8764a91766275a687c3 386 Gene3D G3DSA:3.40.50.1440 13 213 7.9E-93 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 BUMPUSDA_RS01070 440407b534d5b8764a91766275a687c3 386 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 8 376 37.838 T 23-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 BUMPUSDA_RS01070 440407b534d5b8764a91766275a687c3 386 Pfam PF12327 FtsZ family, C-terminal domain 221 315 6.2E-37 T 23-04-2016 IPR024757 Cell division protein FtsZ, C-terminal BUMPUSDA_RS01070 440407b534d5b8764a91766275a687c3 386 PANTHER PTHR30314:SF3 1 384 4.4E-194 T 23-04-2016 BUMPUSDA_RS01070 440407b534d5b8764a91766275a687c3 386 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 13 172 1.9E-41 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 BUMPUSDA_RS01070 440407b534d5b8764a91766275a687c3 386 Gene3D G3DSA:3.30.1330.20 214 318 8.9E-44 T 23-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain BUMPUSDA_RS01070 440407b534d5b8764a91766275a687c3 386 ProSitePatterns PS01135 FtsZ protein signature 2. 96 117 - T 23-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 BUMPUSDA_RS01070 440407b534d5b8764a91766275a687c3 386 SMART SM00864 12 204 1.5E-112 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 BUMPUSDA_RS00805 75a57dd6f31413291c71eaa16f628125 322 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 211 224 - T 23-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 BUMPUSDA_RS00805 75a57dd6f31413291c71eaa16f628125 322 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 56 71 - T 23-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 BUMPUSDA_RS00805 75a57dd6f31413291c71eaa16f628125 322 PANTHER PTHR11432 1 322 1.0E-180 T 23-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 BUMPUSDA_RS00805 75a57dd6f31413291c71eaa16f628125 322 PANTHER PTHR11432:SF8 1 322 1.0E-180 T 23-04-2016 BUMPUSDA_RS00805 75a57dd6f31413291c71eaa16f628125 322 Pfam PF00146 NADH dehydrogenase 18 317 2.5E-116 T 23-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 BUMPUSDA_RS00805 75a57dd6f31413291c71eaa16f628125 322 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 10 322 22.957 T 23-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 BUMPUSDA_RS01630 3e899c172a887dc2ea5de02d0b56d474 401 Gene3D G3DSA:2.70.70.10 263 381 1.2E-40 T 23-04-2016 BUMPUSDA_RS01630 3e899c172a887dc2ea5de02d0b56d474 401 PANTHER PTHR21666 97 382 1.4E-72 T 23-04-2016 BUMPUSDA_RS01630 3e899c172a887dc2ea5de02d0b56d474 401 Pfam PF01551 Peptidase family M23 284 378 1.9E-29 T 23-04-2016 IPR016047 Peptidase M23 BUMPUSDA_RS01630 3e899c172a887dc2ea5de02d0b56d474 401 PANTHER PTHR21666:SF207 97 382 1.4E-72 T 23-04-2016 BUMPUSDA_RS01630 3e899c172a887dc2ea5de02d0b56d474 401 SUPERFAMILY SSF51261 160 381 1.26E-53 T 23-04-2016 IPR011055 Duplicated hybrid motif BUMPUSDA_RS00255 be178965de70b229e9d17e836bfc3519 403 Gene3D G3DSA:3.40.50.620 7 175 7.5E-57 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BUMPUSDA_RS00255 be178965de70b229e9d17e836bfc3519 403 Gene3D G3DSA:3.90.1260.10 179 401 5.9E-88 T 23-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 BUMPUSDA_RS00255 be178965de70b229e9d17e836bfc3519 403 Hamap MF_00005 Argininosuccinate synthase [argG]. 6 402 50.776 T 23-04-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 BUMPUSDA_RS00255 be178965de70b229e9d17e836bfc3519 403 SUPERFAMILY SSF69864 176 401 2.49E-86 T 23-04-2016 BUMPUSDA_RS00255 be178965de70b229e9d17e836bfc3519 403 PANTHER PTHR11587 6 403 1.9E-245 T 23-04-2016 BUMPUSDA_RS00255 be178965de70b229e9d17e836bfc3519 403 Pfam PF00764 Arginosuccinate synthase 10 396 2.8E-140 T 23-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 BUMPUSDA_RS00255 be178965de70b229e9d17e836bfc3519 403 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 12 20 - T 23-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 BUMPUSDA_RS00255 be178965de70b229e9d17e836bfc3519 403 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 23-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 BUMPUSDA_RS00255 be178965de70b229e9d17e836bfc3519 403 PANTHER PTHR11587:SF6 6 403 1.9E-245 T 23-04-2016 BUMPUSDA_RS00255 be178965de70b229e9d17e836bfc3519 403 TIGRFAM TIGR00032 argG: argininosuccinate synthase 8 396 7.4E-134 T 23-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 BUMPUSDA_RS00255 be178965de70b229e9d17e836bfc3519 403 SUPERFAMILY SSF52402 7 170 3.53E-43 T 23-04-2016 BUMPUSDA_RS02790 b4b587a66c79075ae5dfec7cf8e5ed37 319 TIGRFAM TIGR01380 glut_syn: glutathione synthase 7 317 1.2E-138 T 23-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 BUMPUSDA_RS02790 b4b587a66c79075ae5dfec7cf8e5ed37 319 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 129 302 2.9E-76 T 23-04-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 BUMPUSDA_RS02790 b4b587a66c79075ae5dfec7cf8e5ed37 319 Gene3D G3DSA:3.30.470.20 197 304 5.4E-45 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 BUMPUSDA_RS02790 b4b587a66c79075ae5dfec7cf8e5ed37 319 Gene3D G3DSA:3.30.1490.20 142 196 3.7E-28 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 BUMPUSDA_RS02790 b4b587a66c79075ae5dfec7cf8e5ed37 319 Gene3D G3DSA:3.40.50.20 7 133 4.1E-49 T 23-04-2016 IPR016185 Pre-ATP-grasp domain BUMPUSDA_RS02790 b4b587a66c79075ae5dfec7cf8e5ed37 319 Hamap MF_00162 Glutathione synthetase [gshB]. 1 319 148.6 T 23-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 BUMPUSDA_RS02790 b4b587a66c79075ae5dfec7cf8e5ed37 319 PANTHER PTHR21621 1 319 2.9E-134 T 23-04-2016 BUMPUSDA_RS02790 b4b587a66c79075ae5dfec7cf8e5ed37 319 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 7 125 1.3E-41 T 23-04-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 BUMPUSDA_RS02790 b4b587a66c79075ae5dfec7cf8e5ed37 319 PANTHER PTHR21621:SF4 1 319 2.9E-134 T 23-04-2016 BUMPUSDA_RS02790 b4b587a66c79075ae5dfec7cf8e5ed37 319 SUPERFAMILY SSF56059 128 316 6.01E-52 T 23-04-2016 BUMPUSDA_RS02790 b4b587a66c79075ae5dfec7cf8e5ed37 319 SUPERFAMILY SSF52440 7 127 5.47E-41 T 23-04-2016 IPR016185 Pre-ATP-grasp domain BUMPUSDA_RS01500 c1030101002359d005ac08812b05a87c 410 PANTHER PTHR30489 8 410 3.2E-35 T 23-04-2016 BUMPUSDA_RS01500 c1030101002359d005ac08812b05a87c 410 Pfam PF02687 FtsX-like permease family 270 403 1.4E-12 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 BUMPUSDA_RS02120 c70903f459e87035a5c2929e442bde36 219 PANTHER PTHR11228:SF6 1 56 1.1E-42 T 23-04-2016 BUMPUSDA_RS02120 c70903f459e87035a5c2929e442bde36 219 PANTHER PTHR11228:SF6 72 218 1.1E-42 T 23-04-2016 BUMPUSDA_RS02120 c70903f459e87035a5c2929e442bde36 219 PIRSF PIRSF000370 1 219 3.5E-60 T 23-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 BUMPUSDA_RS02120 c70903f459e87035a5c2929e442bde36 219 Gene3D G3DSA:3.20.20.70 24 124 2.7E-8 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 BUMPUSDA_RS02120 c70903f459e87035a5c2929e442bde36 219 PANTHER PTHR11228 1 56 1.1E-42 T 23-04-2016 BUMPUSDA_RS02120 c70903f459e87035a5c2929e442bde36 219 PANTHER PTHR11228 72 218 1.1E-42 T 23-04-2016 BUMPUSDA_RS02120 c70903f459e87035a5c2929e442bde36 219 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 9 218 7.5E-87 T 23-04-2016 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 BUMPUSDA_RS02120 c70903f459e87035a5c2929e442bde36 219 Pfam PF04055 Radical SAM superfamily 27 123 3.3E-9 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 BUMPUSDA_RS02120 c70903f459e87035a5c2929e442bde36 219 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 219 33.609 T 23-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 BUMPUSDA_RS02120 c70903f459e87035a5c2929e442bde36 219 Pfam PF13394 4Fe-4S single cluster domain 24 128 6.5E-12 T 23-04-2016 BUMPUSDA_RS02120 c70903f459e87035a5c2929e442bde36 219 SUPERFAMILY SSF102114 23 118 1.57E-6 T 23-04-2016 BUMPUSDA_RS01135 771133d1e79138fe9ffa5b733f214b5f 158 PANTHER PTHR30239 1 158 1.2E-75 T 23-04-2016 BUMPUSDA_RS01135 771133d1e79138fe9ffa5b733f214b5f 158 Pfam PF10369 Small subunit of acetolactate synthase 84 158 5.0E-22 T 23-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 BUMPUSDA_RS01135 771133d1e79138fe9ffa5b733f214b5f 158 Gene3D G3DSA:3.30.70.1150 83 158 3.0E-24 T 23-04-2016 BUMPUSDA_RS01135 771133d1e79138fe9ffa5b733f214b5f 158 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 158 4.7E-61 T 23-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 BUMPUSDA_RS01135 771133d1e79138fe9ffa5b733f214b5f 158 Pfam PF13710 ACT domain 12 73 3.6E-16 T 23-04-2016 BUMPUSDA_RS01135 771133d1e79138fe9ffa5b733f214b5f 158 SUPERFAMILY SSF55021 2 76 1.4E-21 T 23-04-2016 BUMPUSDA_RS01135 771133d1e79138fe9ffa5b733f214b5f 158 SUPERFAMILY SSF55021 79 158 1.42E-22 T 23-04-2016 BUMPUSDA_RS01135 771133d1e79138fe9ffa5b733f214b5f 158 Gene3D G3DSA:3.30.70.260 1 78 2.4E-34 T 23-04-2016 BUMPUSDA_RS01135 771133d1e79138fe9ffa5b733f214b5f 158 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 2.0E-35 T 23-04-2016 BUMPUSDA_RS02290 82d8d9edbdf47b78f457cede79cbb637 392 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 23-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 BUMPUSDA_RS02290 82d8d9edbdf47b78f457cede79cbb637 392 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 4.5E-75 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 BUMPUSDA_RS02290 82d8d9edbdf47b78f457cede79cbb637 392 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 4.5E-75 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 BUMPUSDA_RS02290 82d8d9edbdf47b78f457cede79cbb637 392 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 4.5E-75 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 BUMPUSDA_RS02290 82d8d9edbdf47b78f457cede79cbb637 392 PRINTS PR00477 Phosphoglycerate kinase family signature 105 120 4.5E-75 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 BUMPUSDA_RS02290 82d8d9edbdf47b78f457cede79cbb637 392 PRINTS PR00477 Phosphoglycerate kinase family signature 187 206 4.5E-75 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 BUMPUSDA_RS02290 82d8d9edbdf47b78f457cede79cbb637 392 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 4.5E-75 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 BUMPUSDA_RS02290 82d8d9edbdf47b78f457cede79cbb637 392 PRINTS PR00477 Phosphoglycerate kinase family signature 164 186 4.5E-75 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 BUMPUSDA_RS02290 82d8d9edbdf47b78f457cede79cbb637 392 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 4.5E-75 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 BUMPUSDA_RS02290 82d8d9edbdf47b78f457cede79cbb637 392 PRINTS PR00477 Phosphoglycerate kinase family signature 133 155 4.5E-75 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 BUMPUSDA_RS02290 82d8d9edbdf47b78f457cede79cbb637 392 Pfam PF00162 Phosphoglycerate kinase 7 373 2.0E-124 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 BUMPUSDA_RS02290 82d8d9edbdf47b78f457cede79cbb637 392 Gene3D G3DSA:3.40.50.1270 176 371 1.1E-69 T 23-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 BUMPUSDA_RS02290 82d8d9edbdf47b78f457cede79cbb637 392 SUPERFAMILY SSF53748 3 383 1.65E-130 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 BUMPUSDA_RS02290 82d8d9edbdf47b78f457cede79cbb637 392 PANTHER PTHR11406 1 387 2.7E-162 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 BUMPUSDA_RS02290 82d8d9edbdf47b78f457cede79cbb637 392 PIRSF PIRSF000724 1 389 2.4E-124 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 BUMPUSDA_RS02290 82d8d9edbdf47b78f457cede79cbb637 392 PANTHER PTHR11406:SF0 1 387 2.7E-162 T 23-04-2016 BUMPUSDA_RS02290 82d8d9edbdf47b78f457cede79cbb637 392 Gene3D G3DSA:3.40.50.1260 5 175 1.4E-58 T 23-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 BUMPUSDA_RS02290 82d8d9edbdf47b78f457cede79cbb637 392 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 36.183 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 BUMPUSDA_RS00290 63d7113cba67d00784697c9335f609da 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.74 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS00290 63d7113cba67d00784697c9335f609da 71 PANTHER PTHR21109 1 71 5.0E-26 T 23-04-2016 BUMPUSDA_RS00290 63d7113cba67d00784697c9335f609da 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.6E-17 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS00290 63d7113cba67d00784697c9335f609da 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.6E-17 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS00290 63d7113cba67d00784697c9335f609da 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.6E-17 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS00290 63d7113cba67d00784697c9335f609da 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.6E-17 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS00290 63d7113cba67d00784697c9335f609da 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 55 3.0E-15 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS00290 63d7113cba67d00784697c9335f609da 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 23-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS00290 63d7113cba67d00784697c9335f609da 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 1.4E-24 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS00290 63d7113cba67d00784697c9335f609da 71 Pfam PF01165 Ribosomal protein S21 4 56 4.1E-22 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS00950 c10e27a6f8a510f104124df0d2893b3c 224 Gene3D G3DSA:3.30.420.10 10 210 4.8E-55 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 BUMPUSDA_RS00950 c10e27a6f8a510f104124df0d2893b3c 224 SUPERFAMILY SSF53098 8 207 2.48E-55 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 BUMPUSDA_RS00950 c10e27a6f8a510f104124df0d2893b3c 224 Pfam PF00929 Exonuclease 20 194 6.2E-35 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III BUMPUSDA_RS00950 c10e27a6f8a510f104124df0d2893b3c 224 Hamap MF_00157 Ribonuclease T [rnt]. 1 224 103.116 T 23-04-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 BUMPUSDA_RS00950 c10e27a6f8a510f104124df0d2893b3c 224 PANTHER PTHR30231:SF2 5 224 3.9E-99 T 23-04-2016 BUMPUSDA_RS00950 c10e27a6f8a510f104124df0d2893b3c 224 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 208 5.6E-94 T 23-04-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 BUMPUSDA_RS00950 c10e27a6f8a510f104124df0d2893b3c 224 SMART SM00479 18 203 6.5E-36 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III BUMPUSDA_RS00950 c10e27a6f8a510f104124df0d2893b3c 224 PANTHER PTHR30231 5 224 3.9E-99 T 23-04-2016 BUMPUSDA_RS01730 4df719b1775237e99fe876ef2c44ea8e 413 Pfam PF07559 Flagellar basal body protein FlaE 184 294 5.0E-9 T 23-04-2016 IPR011491 Flagellar hook protein FlgE BUMPUSDA_RS01730 4df719b1775237e99fe876ef2c44ea8e 413 SUPERFAMILY SSF117143 77 374 4.45E-60 T 23-04-2016 BUMPUSDA_RS01730 4df719b1775237e99fe876ef2c44ea8e 413 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 336 412 5.0E-16 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BUMPUSDA_RS01730 4df719b1775237e99fe876ef2c44ea8e 413 PANTHER PTHR30435:SF1 1 122 4.3E-73 T 23-04-2016 BUMPUSDA_RS01730 4df719b1775237e99fe876ef2c44ea8e 413 PANTHER PTHR30435:SF1 291 413 4.3E-73 T 23-04-2016 BUMPUSDA_RS01730 4df719b1775237e99fe876ef2c44ea8e 413 PANTHER PTHR30435 1 122 4.3E-73 T 23-04-2016 BUMPUSDA_RS01730 4df719b1775237e99fe876ef2c44ea8e 413 PANTHER PTHR30435 291 413 4.3E-73 T 23-04-2016 BUMPUSDA_RS01730 4df719b1775237e99fe876ef2c44ea8e 413 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 23-04-2016 IPR019776 Flagellar basal body rod protein, conserved site BUMPUSDA_RS01730 4df719b1775237e99fe876ef2c44ea8e 413 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 395 4.6E-78 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G BUMPUSDA_RS01730 4df719b1775237e99fe876ef2c44ea8e 413 Pfam PF00460 Flagella basal body rod protein 5 33 3.4E-5 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BUMPUSDA_RS01335 a8adeee32f504586387bdbfa62bc9dc8 456 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 23-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 BUMPUSDA_RS01335 a8adeee32f504586387bdbfa62bc9dc8 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 454 1.5E-125 T 23-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 BUMPUSDA_RS01335 a8adeee32f504586387bdbfa62bc9dc8 456 SUPERFAMILY SSF48557 4 448 3.61E-94 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 BUMPUSDA_RS01335 a8adeee32f504586387bdbfa62bc9dc8 456 PANTHER PTHR11444:SF17 5 456 2.9E-250 T 23-04-2016 BUMPUSDA_RS01335 a8adeee32f504586387bdbfa62bc9dc8 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 1.0E-47 T 23-04-2016 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 BUMPUSDA_RS01335 a8adeee32f504586387bdbfa62bc9dc8 456 PANTHER PTHR11444 5 456 2.9E-250 T 23-04-2016 IPR000362 Fumarate lyase family BUMPUSDA_RS01335 a8adeee32f504586387bdbfa62bc9dc8 456 Gene3D G3DSA:1.10.40.30 390 445 6.7E-28 T 23-04-2016 BUMPUSDA_RS01335 a8adeee32f504586387bdbfa62bc9dc8 456 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 7.4E-18 T 23-04-2016 IPR000362 Fumarate lyase family BUMPUSDA_RS01335 a8adeee32f504586387bdbfa62bc9dc8 456 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 7.4E-18 T 23-04-2016 IPR000362 Fumarate lyase family BUMPUSDA_RS01335 a8adeee32f504586387bdbfa62bc9dc8 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 7.4E-18 T 23-04-2016 IPR000362 Fumarate lyase family BUMPUSDA_RS01335 a8adeee32f504586387bdbfa62bc9dc8 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 7.4E-18 T 23-04-2016 IPR000362 Fumarate lyase family BUMPUSDA_RS01335 a8adeee32f504586387bdbfa62bc9dc8 456 Gene3D G3DSA:1.10.275.10 1 119 2.3E-38 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal BUMPUSDA_RS01335 a8adeee32f504586387bdbfa62bc9dc8 456 Gene3D G3DSA:1.20.200.10 120 389 1.0E-77 T 23-04-2016 BUMPUSDA_RS01335 a8adeee32f504586387bdbfa62bc9dc8 456 Pfam PF00206 Lyase 14 312 1.3E-56 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal BUMPUSDA_RS01060 c6f196314b65a2f452ba95ca535eeb8c 233 SUPERFAMILY SSF53167 1 227 2.23E-61 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 BUMPUSDA_RS01060 c6f196314b65a2f452ba95ca535eeb8c 233 PANTHER PTHR21234 1 230 1.2E-42 T 23-04-2016 IPR018017 Nucleoside phosphorylase BUMPUSDA_RS01060 c6f196314b65a2f452ba95ca535eeb8c 233 Gene3D G3DSA:3.40.50.1580 1 229 5.1E-63 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 BUMPUSDA_RS01060 c6f196314b65a2f452ba95ca535eeb8c 233 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 229 4.4E-62 T 23-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 BUMPUSDA_RS01060 c6f196314b65a2f452ba95ca535eeb8c 233 PANTHER PTHR21234:SF16 1 230 1.2E-42 T 23-04-2016 BUMPUSDA_RS01060 c6f196314b65a2f452ba95ca535eeb8c 233 Pfam PF01048 Phosphorylase superfamily 2 226 7.6E-38 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 BUMPUSDA_RS00630 7b985ce03b8e3118a19292035e9cb531 179 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 91 177 8.6E-37 T 23-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 BUMPUSDA_RS00630 7b985ce03b8e3118a19292035e9cb531 179 PANTHER PTHR10938 13 179 4.4E-66 T 23-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 BUMPUSDA_RS00630 7b985ce03b8e3118a19292035e9cb531 179 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 15 179 2.3E-72 T 23-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 BUMPUSDA_RS00630 7b985ce03b8e3118a19292035e9cb531 179 SUPERFAMILY SSF55200 90 179 3.92E-34 T 23-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 BUMPUSDA_RS00630 7b985ce03b8e3118a19292035e9cb531 179 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 15 84 5.4E-30 T 23-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 BUMPUSDA_RS00630 7b985ce03b8e3118a19292035e9cb531 179 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 9 179 29.961 T 23-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 BUMPUSDA_RS00630 7b985ce03b8e3118a19292035e9cb531 179 ProSitePatterns PS00938 Initiation factor 3 signature. 66 79 - T 23-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 BUMPUSDA_RS00630 7b985ce03b8e3118a19292035e9cb531 179 SUPERFAMILY SSF54364 13 86 5.1E-27 T 23-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 BUMPUSDA_RS00630 7b985ce03b8e3118a19292035e9cb531 179 Gene3D G3DSA:3.30.110.10 87 179 2.0E-39 T 23-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 BUMPUSDA_RS00630 7b985ce03b8e3118a19292035e9cb531 179 Gene3D G3DSA:3.10.20.80 13 86 1.3E-32 T 23-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 BUMPUSDA_RS01865 1fd66d74e92a4826828de8934c2bbb1c 499 PANTHER PTHR11963 12 498 1.5E-193 T 23-04-2016 BUMPUSDA_RS01865 1fd66d74e92a4826828de8934c2bbb1c 499 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 187 488 1.2E-112 T 23-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 BUMPUSDA_RS01865 1fd66d74e92a4826828de8934c2bbb1c 499 SUPERFAMILY SSF53187 183 495 1.04E-116 T 23-04-2016 BUMPUSDA_RS01865 1fd66d74e92a4826828de8934c2bbb1c 499 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 497 38.102 T 23-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 BUMPUSDA_RS01865 1fd66d74e92a4826828de8934c2bbb1c 499 PANTHER PTHR11963:SF13 12 498 1.5E-193 T 23-04-2016 BUMPUSDA_RS01865 1fd66d74e92a4826828de8934c2bbb1c 499 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 350 357 - T 23-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 BUMPUSDA_RS01865 1fd66d74e92a4826828de8934c2bbb1c 499 SUPERFAMILY SSF52949 1 183 1.47E-33 T 23-04-2016 BUMPUSDA_RS01865 1fd66d74e92a4826828de8934c2bbb1c 499 Gene3D G3DSA:3.40.220.10 1 158 8.3E-35 T 23-04-2016 BUMPUSDA_RS01865 1fd66d74e92a4826828de8934c2bbb1c 499 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 142 1.2E-21 T 23-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 BUMPUSDA_RS01865 1fd66d74e92a4826828de8934c2bbb1c 499 Gene3D G3DSA:3.40.630.10 171 496 1.7E-126 T 23-04-2016 BUMPUSDA_RS01865 1fd66d74e92a4826828de8934c2bbb1c 499 PRINTS PR00481 Cytosol aminopeptidase signature 265 282 5.6E-52 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BUMPUSDA_RS01865 1fd66d74e92a4826828de8934c2bbb1c 499 PRINTS PR00481 Cytosol aminopeptidase signature 346 366 5.6E-52 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BUMPUSDA_RS01865 1fd66d74e92a4826828de8934c2bbb1c 499 PRINTS PR00481 Cytosol aminopeptidase signature 374 389 5.6E-52 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BUMPUSDA_RS01865 1fd66d74e92a4826828de8934c2bbb1c 499 PRINTS PR00481 Cytosol aminopeptidase signature 324 345 5.6E-52 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BUMPUSDA_RS01865 1fd66d74e92a4826828de8934c2bbb1c 499 PRINTS PR00481 Cytosol aminopeptidase signature 287 308 5.6E-52 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BUMPUSDA_RS02065 8615e21c052422d87978df36991f265f 379 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 378 4.7E-194 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 BUMPUSDA_RS02065 8615e21c052422d87978df36991f265f 379 Gene3D G3DSA:3.30.300.10 244 377 2.0E-69 T 23-04-2016 BUMPUSDA_RS02065 8615e21c052422d87978df36991f265f 379 SUPERFAMILY SSF55973 3 109 5.49E-45 T 23-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 BUMPUSDA_RS02065 8615e21c052422d87978df36991f265f 379 PIRSF PIRSF000497 1 379 1.0E-172 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 BUMPUSDA_RS02065 8615e21c052422d87978df36991f265f 379 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 370 2.6E-69 T 23-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 BUMPUSDA_RS02065 8615e21c052422d87978df36991f265f 379 SUPERFAMILY SSF55973 233 377 2.67E-70 T 23-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 BUMPUSDA_RS02065 8615e21c052422d87978df36991f265f 379 SUPERFAMILY SSF55973 111 232 1.22E-50 T 23-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 BUMPUSDA_RS02065 8615e21c052422d87978df36991f265f 379 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 3 101 2.2E-41 T 23-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 BUMPUSDA_RS02065 8615e21c052422d87978df36991f265f 379 PANTHER PTHR11964 1 376 7.0E-268 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 BUMPUSDA_RS02065 8615e21c052422d87978df36991f265f 379 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 23-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 BUMPUSDA_RS02065 8615e21c052422d87978df36991f265f 379 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 3.4E-44 T 23-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 BUMPUSDA_RS02065 8615e21c052422d87978df36991f265f 379 Gene3D G3DSA:3.30.300.10 136 233 2.7E-42 T 23-04-2016 BUMPUSDA_RS02065 8615e21c052422d87978df36991f265f 379 Gene3D G3DSA:3.30.300.10 11 135 7.4E-47 T 23-04-2016 BUMPUSDA_RS02065 8615e21c052422d87978df36991f265f 379 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 379 56.871 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 BUMPUSDA_RS02065 8615e21c052422d87978df36991f265f 379 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 23-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 BUMPUSDA_RS02520 7d1f05705ac2cfb7dcef919259e7483b 190 Pfam PF01300 Telomere recombination 16 186 1.3E-37 T 23-04-2016 IPR006070 YrdC-like domain GO:0003725 BUMPUSDA_RS02520 7d1f05705ac2cfb7dcef919259e7483b 190 PANTHER PTHR17490:SF8 14 185 1.3E-75 T 23-04-2016 BUMPUSDA_RS02520 7d1f05705ac2cfb7dcef919259e7483b 190 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 7 188 36.067 T 23-04-2016 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 BUMPUSDA_RS02520 7d1f05705ac2cfb7dcef919259e7483b 190 SUPERFAMILY SSF55821 5 187 1.92E-49 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain BUMPUSDA_RS02520 7d1f05705ac2cfb7dcef919259e7483b 190 PANTHER PTHR17490 14 185 1.3E-75 T 23-04-2016 BUMPUSDA_RS02520 7d1f05705ac2cfb7dcef919259e7483b 190 Gene3D G3DSA:3.90.870.10 13 186 1.1E-44 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain BUMPUSDA_RS00100 fbd5a3c9ae2f49fc34aac6deacaa4ba6 337 Pfam PF13394 4Fe-4S single cluster domain 116 196 5.3E-7 T 23-04-2016 BUMPUSDA_RS00100 fbd5a3c9ae2f49fc34aac6deacaa4ba6 337 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 16 336 2.6E-133 T 23-04-2016 IPR022462 Lysine-2,3-aminomutase-like BUMPUSDA_RS00100 fbd5a3c9ae2f49fc34aac6deacaa4ba6 337 SUPERFAMILY SSF102114 103 324 3.01E-25 T 23-04-2016 BUMPUSDA_RS00100 fbd5a3c9ae2f49fc34aac6deacaa4ba6 337 PANTHER PTHR30538:SF1 16 333 4.9E-115 T 23-04-2016 BUMPUSDA_RS00100 fbd5a3c9ae2f49fc34aac6deacaa4ba6 337 Gene3D G3DSA:3.20.20.70 104 315 1.3E-16 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 BUMPUSDA_RS00100 fbd5a3c9ae2f49fc34aac6deacaa4ba6 337 TIGRFAM TIGR00238 TIGR00238: KamA family protein 7 327 1.9E-108 T 23-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase BUMPUSDA_RS00100 fbd5a3c9ae2f49fc34aac6deacaa4ba6 337 PANTHER PTHR30538 16 333 4.9E-115 T 23-04-2016 BUMPUSDA_RS00100 fbd5a3c9ae2f49fc34aac6deacaa4ba6 337 PIRSF PIRSF004911 3 337 6.4E-111 T 23-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase BUMPUSDA_RS00830 443d8785edff8828ab49bec84d4ca978 505 PANTHER PTHR22773:SF40 1 500 6.6E-133 T 23-04-2016 BUMPUSDA_RS00830 443d8785edff8828ab49bec84d4ca978 505 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 336 355 8.2E-25 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 BUMPUSDA_RS00830 443d8785edff8828ab49bec84d4ca978 505 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 388 414 8.2E-25 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 BUMPUSDA_RS00830 443d8785edff8828ab49bec84d4ca978 505 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 248 272 8.2E-25 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 BUMPUSDA_RS00830 443d8785edff8828ab49bec84d4ca978 505 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 139 158 8.2E-25 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 BUMPUSDA_RS00830 443d8785edff8828ab49bec84d4ca978 505 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 173 197 8.2E-25 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 BUMPUSDA_RS00830 443d8785edff8828ab49bec84d4ca978 505 PANTHER PTHR22773 1 500 6.6E-133 T 23-04-2016 BUMPUSDA_RS00830 443d8785edff8828ab49bec84d4ca978 505 Pfam PF00361 Proton-conducting membrane transporter 133 431 1.2E-59 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 BUMPUSDA_RS00830 443d8785edff8828ab49bec84d4ca978 505 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 3 495 7.1E-158 T 23-04-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 BUMPUSDA_RS00185 03de0fd87836345f743e3b54f239ab8e 165 SUPERFAMILY SSF160369 4 161 9.55E-35 T 23-04-2016 BUMPUSDA_RS00185 03de0fd87836345f743e3b54f239ab8e 165 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 162 23.095 T 23-04-2016 IPR022973 Ribosomal protein L10 BUMPUSDA_RS00185 03de0fd87836345f743e3b54f239ab8e 165 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 23-04-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS00185 03de0fd87836345f743e3b54f239ab8e 165 Pfam PF00466 Ribosomal protein L10 6 101 3.1E-17 T 23-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 BUMPUSDA_RS00185 03de0fd87836345f743e3b54f239ab8e 165 PANTHER PTHR11560 1 163 5.5E-36 T 23-04-2016 BUMPUSDA_RS01105 d668c24a05241572045aaf16dc695a78 357 Pfam PF00953 Glycosyl transferase family 4 95 281 5.1E-35 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 BUMPUSDA_RS01105 d668c24a05241572045aaf16dc695a78 357 PANTHER PTHR22926 1 356 2.3E-137 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 BUMPUSDA_RS01105 d668c24a05241572045aaf16dc695a78 357 PANTHER PTHR22926:SF5 1 356 2.3E-137 T 23-04-2016 BUMPUSDA_RS01105 d668c24a05241572045aaf16dc695a78 357 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 34 356 3.0E-119 T 23-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 BUMPUSDA_RS01105 d668c24a05241572045aaf16dc695a78 357 ProSitePatterns PS01348 MraY family signature 2. 186 197 - T 23-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 BUMPUSDA_RS01105 d668c24a05241572045aaf16dc695a78 357 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 21 355 22.569 T 23-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 BUMPUSDA_RS01530 26f07f345b5992c295f2df9f69b62e1a 908 Gene3D G3DSA:3.40.50.970 143 495 1.8E-61 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold BUMPUSDA_RS01530 26f07f345b5992c295f2df9f69b62e1a 908 SMART SM00861 567 760 2.6E-49 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain BUMPUSDA_RS01530 26f07f345b5992c295f2df9f69b62e1a 908 PANTHER PTHR23152 1 908 0.0 T 23-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 BUMPUSDA_RS01530 26f07f345b5992c295f2df9f69b62e1a 908 PIRSF PIRSF000157 1 907 0.0 T 23-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 BUMPUSDA_RS01530 26f07f345b5992c295f2df9f69b62e1a 908 SUPERFAMILY SSF52518 144 504 2.35E-73 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold BUMPUSDA_RS01530 26f07f345b5992c295f2df9f69b62e1a 908 Gene3D G3DSA:3.40.50.970 568 763 9.3E-22 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold BUMPUSDA_RS01530 26f07f345b5992c295f2df9f69b62e1a 908 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 765 905 2.6E-45 T 23-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 BUMPUSDA_RS01530 26f07f345b5992c295f2df9f69b62e1a 908 Pfam PF02779 Transketolase, pyrimidine binding domain 567 760 9.4E-56 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain BUMPUSDA_RS01530 26f07f345b5992c295f2df9f69b62e1a 908 Pfam PF00676 Dehydrogenase E1 component 213 493 4.3E-45 T 23-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 BUMPUSDA_RS01530 26f07f345b5992c295f2df9f69b62e1a 908 SUPERFAMILY SSF52518 549 767 2.55E-46 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold BUMPUSDA_RS01530 26f07f345b5992c295f2df9f69b62e1a 908 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 903 0.0 T 23-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 BUMPUSDA_RS01530 26f07f345b5992c295f2df9f69b62e1a 908 PANTHER PTHR23152:SF4 1 908 0.0 T 23-04-2016 BUMPUSDA_RS01530 26f07f345b5992c295f2df9f69b62e1a 908 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 46 8.1E-13 T 23-04-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 BUMPUSDA_RS01980 20a63167c5a6ace8ebb650d5e20e33eb 142 SUPERFAMILY SSF52161 1 138 1.1E-54 T 23-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS01980 20a63167c5a6ace8ebb650d5e20e33eb 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 23-04-2016 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS01980 20a63167c5a6ace8ebb650d5e20e33eb 142 PANTHER PTHR11545 1 142 4.4E-63 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS01980 20a63167c5a6ace8ebb650d5e20e33eb 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 25.598 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS01980 20a63167c5a6ace8ebb650d5e20e33eb 142 Gene3D G3DSA:3.90.1180.10 3 140 8.8E-57 T 23-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS01980 20a63167c5a6ace8ebb650d5e20e33eb 142 Pfam PF00572 Ribosomal protein L13 14 137 3.5E-51 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS01980 20a63167c5a6ace8ebb650d5e20e33eb 142 PIRSF PIRSF002181 1 142 4.6E-47 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS01980 20a63167c5a6ace8ebb650d5e20e33eb 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 7 141 3.3E-61 T 23-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS01620 9b5d092c94ed13f3246bec395e8b1b1c 107 SUPERFAMILY SSF53807 21 98 2.01E-16 T 23-04-2016 BUMPUSDA_RS01620 9b5d092c94ed13f3246bec395e8b1b1c 107 Gene3D G3DSA:3.40.50.1980 16 104 1.4E-17 T 23-04-2016 BUMPUSDA_RS01620 9b5d092c94ed13f3246bec395e8b1b1c 107 Pfam PF01297 Zinc-uptake complex component A periplasmic 32 99 9.2E-12 T 23-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 BUMPUSDA_RS01620 9b5d092c94ed13f3246bec395e8b1b1c 107 PANTHER PTHR30477:SF1 8 92 1.0E-16 T 23-04-2016 BUMPUSDA_RS01620 9b5d092c94ed13f3246bec395e8b1b1c 107 PANTHER PTHR30477 8 92 1.0E-16 T 23-04-2016 BUMPUSDA_RS02570 6322ce1b934b6c66f8440f77ffeac4fa 439 Hamap MF_01465 Protein translocase subunit SecY [secY]. 10 433 28.123 T 23-04-2016 IPR026593 Protein translocase subunit SecY BUMPUSDA_RS02570 6322ce1b934b6c66f8440f77ffeac4fa 439 SUPERFAMILY SSF103491 15 423 7.06E-127 T 23-04-2016 IPR023201 SecY subunit domain BUMPUSDA_RS02570 6322ce1b934b6c66f8440f77ffeac4fa 439 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 429 3.6E-132 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 BUMPUSDA_RS02570 6322ce1b934b6c66f8440f77ffeac4fa 439 Pfam PF00344 SecY translocase 76 416 2.0E-113 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 BUMPUSDA_RS02570 6322ce1b934b6c66f8440f77ffeac4fa 439 ProSitePatterns PS00756 Protein secY signature 2. 173 190 - T 23-04-2016 IPR030659 SecY conserved site BUMPUSDA_RS02570 6322ce1b934b6c66f8440f77ffeac4fa 439 PIRSF PIRSF004557 4 439 1.0E-120 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 BUMPUSDA_RS02570 6322ce1b934b6c66f8440f77ffeac4fa 439 PANTHER PTHR10906 15 438 1.0E-201 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 BUMPUSDA_RS02570 6322ce1b934b6c66f8440f77ffeac4fa 439 Gene3D G3DSA:1.10.3370.10 15 437 6.7E-158 T 23-04-2016 IPR023201 SecY subunit domain BUMPUSDA_RS02570 6322ce1b934b6c66f8440f77ffeac4fa 439 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 23-04-2016 IPR030659 SecY conserved site BUMPUSDA_RS02570 6322ce1b934b6c66f8440f77ffeac4fa 439 PANTHER PTHR10906:SF2 15 438 1.0E-201 T 23-04-2016 BUMPUSDA_RS02570 6322ce1b934b6c66f8440f77ffeac4fa 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 180 203 9.5E-94 T 23-04-2016 BUMPUSDA_RS02570 6322ce1b934b6c66f8440f77ffeac4fa 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 370 388 9.5E-94 T 23-04-2016 BUMPUSDA_RS02570 6322ce1b934b6c66f8440f77ffeac4fa 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 402 420 9.5E-94 T 23-04-2016 BUMPUSDA_RS02570 6322ce1b934b6c66f8440f77ffeac4fa 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 9.5E-94 T 23-04-2016 BUMPUSDA_RS02570 6322ce1b934b6c66f8440f77ffeac4fa 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 315 337 9.5E-94 T 23-04-2016 BUMPUSDA_RS02570 6322ce1b934b6c66f8440f77ffeac4fa 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 272 291 9.5E-94 T 23-04-2016 BUMPUSDA_RS02570 6322ce1b934b6c66f8440f77ffeac4fa 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 9.5E-94 T 23-04-2016 BUMPUSDA_RS02570 6322ce1b934b6c66f8440f77ffeac4fa 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 9.5E-94 T 23-04-2016 BUMPUSDA_RS02570 6322ce1b934b6c66f8440f77ffeac4fa 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 154 179 9.5E-94 T 23-04-2016 BUMPUSDA_RS00385 fff7aaa4d767c2d98b6fd9b8ad196759 453 Gene3D G3DSA:3.40.50.300 147 407 4.5E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS00385 fff7aaa4d767c2d98b6fd9b8ad196759 453 SUPERFAMILY SSF52540 108 377 9.94E-87 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS00385 fff7aaa4d767c2d98b6fd9b8ad196759 453 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 8 452 3.9E-165 T 23-04-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BUMPUSDA_RS00385 fff7aaa4d767c2d98b6fd9b8ad196759 453 PANTHER PTHR15184 5 453 5.0E-199 T 23-04-2016 BUMPUSDA_RS00385 fff7aaa4d767c2d98b6fd9b8ad196759 453 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 162 372 4.0E-69 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BUMPUSDA_RS00385 fff7aaa4d767c2d98b6fd9b8ad196759 453 SMART SM00382 174 352 4.0E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain BUMPUSDA_RS00385 fff7aaa4d767c2d98b6fd9b8ad196759 453 PANTHER PTHR15184:SF9 5 453 5.0E-199 T 23-04-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 BUMPUSDA_RS00810 bebd05452b86da86b2bc192ca6e9c81c 180 PANTHER PTHR10849:SF13 8 180 7.8E-71 T 23-04-2016 BUMPUSDA_RS00810 bebd05452b86da86b2bc192ca6e9c81c 180 PANTHER PTHR10849 8 180 7.8E-71 T 23-04-2016 BUMPUSDA_RS00810 bebd05452b86da86b2bc192ca6e9c81c 180 Gene3D G3DSA:3.30.70.20 26 117 1.7E-18 T 23-04-2016 BUMPUSDA_RS00810 bebd05452b86da86b2bc192ca6e9c81c 180 SUPERFAMILY SSF54862 33 157 7.11E-28 T 23-04-2016 BUMPUSDA_RS00810 bebd05452b86da86b2bc192ca6e9c81c 180 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 7 150 26.618 T 23-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 BUMPUSDA_RS00810 bebd05452b86da86b2bc192ca6e9c81c 180 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 16 137 2.0E-48 T 23-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 BUMPUSDA_RS00810 bebd05452b86da86b2bc192ca6e9c81c 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 60 71 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BUMPUSDA_RS00810 bebd05452b86da86b2bc192ca6e9c81c 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BUMPUSDA_RS00810 bebd05452b86da86b2bc192ca6e9c81c 180 Pfam PF12838 4Fe-4S dicluster domain 59 113 3.7E-11 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BUMPUSDA_RS00915 11db0878fe5df8140ce40889da0922a1 247 Pfam PF09849 Uncharacterized protein conserved in bacteria (DUF2076) 1 244 8.0E-49 T 23-04-2016 IPR018648 Protein of unknown function DUF2076 BUMPUSDA_RS02690 42b2fa95f5f4932fe03b68cfbef27e9b 156 SUPERFAMILY SSF47973 12 156 1.44E-57 T 23-04-2016 IPR023798 Ribosomal protein S7 domain BUMPUSDA_RS02690 42b2fa95f5f4932fe03b68cfbef27e9b 156 PIRSF PIRSF002122 2 156 3.8E-62 T 23-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 BUMPUSDA_RS02690 42b2fa95f5f4932fe03b68cfbef27e9b 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 23-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 BUMPUSDA_RS02690 42b2fa95f5f4932fe03b68cfbef27e9b 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 7.4E-69 T 23-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 BUMPUSDA_RS02690 42b2fa95f5f4932fe03b68cfbef27e9b 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 1.2E-61 T 23-04-2016 IPR023798 Ribosomal protein S7 domain BUMPUSDA_RS02690 42b2fa95f5f4932fe03b68cfbef27e9b 156 Gene3D G3DSA:1.10.455.10 9 156 2.2E-64 T 23-04-2016 IPR023798 Ribosomal protein S7 domain BUMPUSDA_RS02690 42b2fa95f5f4932fe03b68cfbef27e9b 156 PANTHER PTHR11205 1 156 4.1E-78 T 23-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 BUMPUSDA_RS02690 42b2fa95f5f4932fe03b68cfbef27e9b 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 34.737 T 23-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 BUMPUSDA_RS01805 7bc90857ea307680a3e9f11c16e425ba 264 PIRSF PIRSF005902 1 264 6.2E-77 T 23-04-2016 IPR001130 TatD family GO:0016788 BUMPUSDA_RS01805 7bc90857ea307680a3e9f11c16e425ba 264 PANTHER PTHR10060:SF20 1 264 4.7E-107 T 23-04-2016 BUMPUSDA_RS01805 7bc90857ea307680a3e9f11c16e425ba 264 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 23-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 BUMPUSDA_RS01805 7bc90857ea307680a3e9f11c16e425ba 264 Gene3D G3DSA:3.20.20.140 2 264 2.0E-80 T 23-04-2016 BUMPUSDA_RS01805 7bc90857ea307680a3e9f11c16e425ba 264 PANTHER PTHR10060 1 264 4.7E-107 T 23-04-2016 IPR001130 TatD family GO:0016788 BUMPUSDA_RS01805 7bc90857ea307680a3e9f11c16e425ba 264 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 134 144 - T 23-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 BUMPUSDA_RS01805 7bc90857ea307680a3e9f11c16e425ba 264 SUPERFAMILY SSF51556 1 264 1.99E-81 T 23-04-2016 IPR032466 Metal-dependent hydrolase BUMPUSDA_RS01805 7bc90857ea307680a3e9f11c16e425ba 264 Pfam PF01026 TatD related DNase 4 263 2.5E-73 T 23-04-2016 IPR001130 TatD family GO:0016788 BUMPUSDA_RS01805 7bc90857ea307680a3e9f11c16e425ba 264 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 263 6.3E-82 T 23-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 BUMPUSDA_RS01780 23b1e1c2fffa676581499771b99b6428 316 SUPERFAMILY SSF55048 132 193 1.16E-10 T 23-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 BUMPUSDA_RS01780 23b1e1c2fffa676581499771b99b6428 316 Gene3D G3DSA:3.40.366.10 5 123 1.6E-58 T 23-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 BUMPUSDA_RS01780 23b1e1c2fffa676581499771b99b6428 316 Gene3D G3DSA:3.40.366.10 198 291 1.6E-58 T 23-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 BUMPUSDA_RS01780 23b1e1c2fffa676581499771b99b6428 316 Pfam PF00698 Acyl transferase domain 7 287 8.1E-29 T 23-04-2016 IPR014043 Acyl transferase BUMPUSDA_RS01780 23b1e1c2fffa676581499771b99b6428 316 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 4 290 6.6E-86 T 23-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 BUMPUSDA_RS01780 23b1e1c2fffa676581499771b99b6428 316 PIRSF PIRSF000446 1 311 6.7E-119 T 23-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 BUMPUSDA_RS01780 23b1e1c2fffa676581499771b99b6428 316 SUPERFAMILY SSF52151 4 123 3.92E-57 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 BUMPUSDA_RS01780 23b1e1c2fffa676581499771b99b6428 316 SUPERFAMILY SSF52151 191 290 3.92E-57 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 BUMPUSDA_RS01780 23b1e1c2fffa676581499771b99b6428 316 Gene3D G3DSA:3.30.70.250 129 197 7.8E-17 T 23-04-2016 BUMPUSDA_RS01780 23b1e1c2fffa676581499771b99b6428 316 PANTHER PTHR10982 1 288 2.0E-94 T 23-04-2016 BUMPUSDA_RS01780 23b1e1c2fffa676581499771b99b6428 316 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 299 1.6E-13 T 23-04-2016 IPR020801 Polyketide synthase, acyl transferase domain BUMPUSDA_RS02190 c056377da3ba3a648e5d5a8eb627c7fb 212 Gene3D G3DSA:3.40.30.10 29 211 1.5E-38 T 23-04-2016 IPR012336 Thioredoxin-like fold BUMPUSDA_RS02190 c056377da3ba3a648e5d5a8eb627c7fb 212 PIRSF PIRSF001488 1 212 7.7E-62 T 23-04-2016 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL BUMPUSDA_RS02190 c056377da3ba3a648e5d5a8eb627c7fb 212 SUPERFAMILY SSF52833 29 210 3.64E-33 T 23-04-2016 IPR012336 Thioredoxin-like fold BUMPUSDA_RS02190 c056377da3ba3a648e5d5a8eb627c7fb 212 Pfam PF01323 DSBA-like thioredoxin domain 44 185 6.7E-12 T 23-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 BUMPUSDA_RS02190 c056377da3ba3a648e5d5a8eb627c7fb 212 PANTHER PTHR35891 1 212 2.2E-42 T 23-04-2016 BUMPUSDA_RS02190 c056377da3ba3a648e5d5a8eb627c7fb 212 ProSitePatterns PS00194 Thioredoxin family active site. 44 62 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 BUMPUSDA_RS02190 c056377da3ba3a648e5d5a8eb627c7fb 212 PANTHER PTHR35891:SF2 1 212 2.2E-42 T 23-04-2016 BUMPUSDA_RS02915 a9071379eda4dbe839f5f359adbe0c3c 635 Gene3D G3DSA:3.40.930.10 493 631 8.2E-40 T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- BUMPUSDA_RS02915 a9071379eda4dbe839f5f359adbe0c3c 635 PANTHER PTHR30181:SF2 5 607 1.4E-289 T 23-04-2016 BUMPUSDA_RS02915 a9071379eda4dbe839f5f359adbe0c3c 635 Gene3D G3DSA:3.40.50.10370 374 466 3.9E-39 T 23-04-2016 IPR029503 Phosphotransferase system EIIB component, mannitol-specific GO:0009401|GO:0022872 BUMPUSDA_RS02915 a9071379eda4dbe839f5f359adbe0c3c 635 Pfam PF02378 Phosphotransferase system, EIIC 17 277 9.4E-20 T 23-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BUMPUSDA_RS02915 a9071379eda4dbe839f5f359adbe0c3c 635 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 536 552 - T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- BUMPUSDA_RS02915 a9071379eda4dbe839f5f359adbe0c3c 635 PANTHER PTHR30181 5 607 1.4E-289 T 23-04-2016 BUMPUSDA_RS02915 a9071379eda4dbe839f5f359adbe0c3c 635 SUPERFAMILY SSF52794 375 467 2.25E-23 T 23-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 BUMPUSDA_RS02915 a9071379eda4dbe839f5f359adbe0c3c 635 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 493 631 2.4E-32 T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- BUMPUSDA_RS02915 a9071379eda4dbe839f5f359adbe0c3c 635 SUPERFAMILY SSF55804 492 630 2.75E-38 T 23-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 BUMPUSDA_RS02915 a9071379eda4dbe839f5f359adbe0c3c 635 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 8 337 7.7E-142 T 23-04-2016 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 BUMPUSDA_RS02915 a9071379eda4dbe839f5f359adbe0c3c 635 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 379 462 1.1E-9 T 23-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 BUMPUSDA_RS02870 bcd03fa8159e65d14603b2a124a3f75e 75 PANTHER PTHR13479 2 74 6.8E-34 T 23-04-2016 BUMPUSDA_RS02870 bcd03fa8159e65d14603b2a124a3f75e 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 4.0E-38 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02870 bcd03fa8159e65d14603b2a124a3f75e 75 Pfam PF01084 Ribosomal protein S18 18 68 9.9E-26 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02870 bcd03fa8159e65d14603b2a124a3f75e 75 Gene3D G3DSA:4.10.640.10 8 74 2.7E-33 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02870 bcd03fa8159e65d14603b2a124a3f75e 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 23-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02870 bcd03fa8159e65d14603b2a124a3f75e 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.622 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02870 bcd03fa8159e65d14603b2a124a3f75e 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.0E-18 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02870 bcd03fa8159e65d14603b2a124a3f75e 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.0E-18 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02870 bcd03fa8159e65d14603b2a124a3f75e 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.0E-18 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02870 bcd03fa8159e65d14603b2a124a3f75e 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.0E-18 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02870 bcd03fa8159e65d14603b2a124a3f75e 75 SUPERFAMILY SSF46911 3 74 1.14E-29 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02870 bcd03fa8159e65d14603b2a124a3f75e 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 73 1.0E-23 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS00110 691ed023e9c049182fbb5423a9ee6372 246 SUPERFAMILY SSF52540 64 224 1.97E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS00110 691ed023e9c049182fbb5423a9ee6372 246 Pfam PF01695 IstB-like ATP binding protein 89 217 2.0E-17 T 23-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 BUMPUSDA_RS00110 691ed023e9c049182fbb5423a9ee6372 246 Gene3D G3DSA:3.40.50.300 51 223 1.5E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS00110 691ed023e9c049182fbb5423a9ee6372 246 PANTHER PTHR30050:SF9 10 241 1.3E-118 T 23-04-2016 BUMPUSDA_RS00110 691ed023e9c049182fbb5423a9ee6372 246 PIRSF PIRSF003073 6 245 1.5E-29 T 23-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein BUMPUSDA_RS00110 691ed023e9c049182fbb5423a9ee6372 246 PANTHER PTHR30050 10 241 1.3E-118 T 23-04-2016 BUMPUSDA_RS01770 257b7d96ed2e09fd40dc9f35f36ef109 314 PANTHER PTHR11079 8 313 2.0E-115 T 23-04-2016 BUMPUSDA_RS01770 257b7d96ed2e09fd40dc9f35f36ef109 314 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 312 3.0E-84 T 23-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 BUMPUSDA_RS01770 257b7d96ed2e09fd40dc9f35f36ef109 314 Gene3D G3DSA:3.10.290.10 20 68 1.6E-4 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 BUMPUSDA_RS01770 257b7d96ed2e09fd40dc9f35f36ef109 314 SMART SM00363 20 82 1.2E-7 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 BUMPUSDA_RS01770 257b7d96ed2e09fd40dc9f35f36ef109 314 Pfam PF00849 RNA pseudouridylate synthase 100 249 1.5E-29 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BUMPUSDA_RS01770 257b7d96ed2e09fd40dc9f35f36ef109 314 PANTHER PTHR11079:SF84 8 313 2.0E-115 T 23-04-2016 BUMPUSDA_RS01770 257b7d96ed2e09fd40dc9f35f36ef109 314 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 139 153 - T 23-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 BUMPUSDA_RS01770 257b7d96ed2e09fd40dc9f35f36ef109 314 SUPERFAMILY SSF55120 93 311 3.52E-61 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 BUMPUSDA_RS01770 257b7d96ed2e09fd40dc9f35f36ef109 314 SUPERFAMILY SSF55174 19 71 1.43E-7 T 23-04-2016 BUMPUSDA_RS01770 257b7d96ed2e09fd40dc9f35f36ef109 314 Pfam PF01479 S4 domain 20 65 5.2E-8 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 BUMPUSDA_RS02625 809c24076b72734f30ae289cb68c37e5 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 23-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02625 809c24076b72734f30ae289cb68c37e5 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 1.4E-11 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02625 809c24076b72734f30ae289cb68c37e5 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 1.4E-11 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02625 809c24076b72734f30ae289cb68c37e5 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 1.4E-11 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02625 809c24076b72734f30ae289cb68c37e5 84 Pfam PF00366 Ribosomal protein S17 10 76 4.2E-30 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02625 809c24076b72734f30ae289cb68c37e5 84 PANTHER PTHR10744 4 82 4.2E-36 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02625 809c24076b72734f30ae289cb68c37e5 84 SUPERFAMILY SSF50249 5 81 5.14E-30 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS02625 809c24076b72734f30ae289cb68c37e5 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 1.1E-34 T 23-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02625 809c24076b72734f30ae289cb68c37e5 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 3 81 24.415 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02625 809c24076b72734f30ae289cb68c37e5 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 6 76 2.0E-32 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02625 809c24076b72734f30ae289cb68c37e5 84 Gene3D G3DSA:2.40.50.140 6 81 1.4E-32 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS01935 ad21333baa69aa64ba55233470a4c594 611 SMART SM00382 184 323 2.1E-24 T 23-04-2016 IPR003593 AAA+ ATPase domain BUMPUSDA_RS01935 ad21333baa69aa64ba55233470a4c594 611 Gene3D G3DSA:1.10.8.60 332 405 3.6E-28 T 23-04-2016 BUMPUSDA_RS01935 ad21333baa69aa64ba55233470a4c594 611 PANTHER PTHR23076 5 596 0.0 T 23-04-2016 BUMPUSDA_RS01935 ad21333baa69aa64ba55233470a4c594 611 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 596 36.626 T 23-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 BUMPUSDA_RS01935 ad21333baa69aa64ba55233470a4c594 611 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 100 593 1.8E-241 T 23-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 BUMPUSDA_RS01935 ad21333baa69aa64ba55233470a4c594 611 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 188 319 4.3E-44 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 BUMPUSDA_RS01935 ad21333baa69aa64ba55233470a4c594 611 SUPERFAMILY SSF52540 143 391 7.64E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01935 ad21333baa69aa64ba55233470a4c594 611 SUPERFAMILY SSF140990 402 603 1.31E-70 T 23-04-2016 BUMPUSDA_RS01935 ad21333baa69aa64ba55233470a4c594 611 Pfam PF06480 FtsH Extracellular 5 90 7.3E-12 T 23-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 BUMPUSDA_RS01935 ad21333baa69aa64ba55233470a4c594 611 Pfam PF01434 Peptidase family M41 382 591 1.4E-78 T 23-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 BUMPUSDA_RS01935 ad21333baa69aa64ba55233470a4c594 611 ProSitePatterns PS00674 AAA-protein family signature. 291 309 - T 23-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 BUMPUSDA_RS01935 ad21333baa69aa64ba55233470a4c594 611 Gene3D G3DSA:3.40.50.300 147 331 1.0E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02855 eadd6981fb9734338c89ce9f223c37a7 152 SUPERFAMILY SSF51283 1 151 3.14E-47 T 23-04-2016 IPR029054 dUTPase-like BUMPUSDA_RS02855 eadd6981fb9734338c89ce9f223c37a7 152 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 5 151 30.399 T 23-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 BUMPUSDA_RS02855 eadd6981fb9734338c89ce9f223c37a7 152 Pfam PF00692 dUTPase 17 150 1.3E-36 T 23-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 BUMPUSDA_RS02855 eadd6981fb9734338c89ce9f223c37a7 152 PANTHER PTHR11241 1 152 1.6E-43 T 23-04-2016 BUMPUSDA_RS02855 eadd6981fb9734338c89ce9f223c37a7 152 Gene3D G3DSA:2.70.40.10 2 151 7.3E-48 T 23-04-2016 IPR029054 dUTPase-like BUMPUSDA_RS02855 eadd6981fb9734338c89ce9f223c37a7 152 TIGRFAM TIGR00576 dut: dUTP diphosphatase 14 150 3.7E-44 T 23-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 BUMPUSDA_RS00780 e3b8d2298b579a92e0945a6b59ba7660 225 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 148 164 - T 23-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 BUMPUSDA_RS00780 e3b8d2298b579a92e0945a6b59ba7660 225 Gene3D G3DSA:3.40.50.700 51 185 1.2E-30 T 23-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 BUMPUSDA_RS00780 e3b8d2298b579a92e0945a6b59ba7660 225 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 67 174 2.8E-21 T 23-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 BUMPUSDA_RS00780 e3b8d2298b579a92e0945a6b59ba7660 225 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 27 181 41.93 T 23-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 BUMPUSDA_RS00780 e3b8d2298b579a92e0945a6b59ba7660 225 SUPERFAMILY SSF56770 40 189 7.59E-64 T 23-04-2016 BUMPUSDA_RS00780 e3b8d2298b579a92e0945a6b59ba7660 225 PANTHER PTHR11995 2 220 7.9E-126 T 23-04-2016 BUMPUSDA_RS00780 e3b8d2298b579a92e0945a6b59ba7660 225 PANTHER PTHR11995:SF14 2 220 7.9E-126 T 23-04-2016 BUMPUSDA_RS00780 e3b8d2298b579a92e0945a6b59ba7660 225 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 45 183 1.9E-70 T 23-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 BUMPUSDA_RS03075 2844199c7443f1db5824570431cce95f 404 Gene3D G3DSA:3.90.1150.10 254 374 7.7E-47 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 BUMPUSDA_RS03075 2844199c7443f1db5824570431cce95f 404 PANTHER PTHR11601 1 403 2.5E-217 T 23-04-2016 BUMPUSDA_RS03075 2844199c7443f1db5824570431cce95f 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 23-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BUMPUSDA_RS03075 2844199c7443f1db5824570431cce95f 404 Gene3D G3DSA:3.40.640.10 18 253 4.2E-90 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 BUMPUSDA_RS03075 2844199c7443f1db5824570431cce95f 404 PANTHER PTHR11601:SF45 1 403 2.5E-217 T 23-04-2016 BUMPUSDA_RS03075 2844199c7443f1db5824570431cce95f 404 SUPERFAMILY SSF53383 3 390 3.46E-103 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase BUMPUSDA_RS03075 2844199c7443f1db5824570431cce95f 404 Pfam PF00266 Aminotransferase class-V 5 367 5.9E-84 T 23-04-2016 IPR000192 Aminotransferase class V domain BUMPUSDA_RS03075 2844199c7443f1db5824570431cce95f 404 PIRSF PIRSF005572 2 384 2.8E-133 T 23-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 BUMPUSDA_RS03075 2844199c7443f1db5824570431cce95f 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 403 1.5E-224 T 23-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 BUMPUSDA_RS03075 2844199c7443f1db5824570431cce95f 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 51.694 T 23-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 BUMPUSDA_RS01645 265990dcb89e357a294a478038db2ef1 293 Pfam PF01435 Peptidase family M48 75 290 3.6E-37 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 BUMPUSDA_RS01645 265990dcb89e357a294a478038db2ef1 293 PANTHER PTHR10120:SF19 1 287 1.7E-90 T 23-04-2016 BUMPUSDA_RS01645 265990dcb89e357a294a478038db2ef1 293 PANTHER PTHR10120 1 287 1.7E-90 T 23-04-2016 BUMPUSDA_RS01645 265990dcb89e357a294a478038db2ef1 293 Gene3D G3DSA:3.30.2010.10 70 156 3.5E-28 T 23-04-2016 BUMPUSDA_RS01645 265990dcb89e357a294a478038db2ef1 293 Hamap MF_00188 Protease HtpX [htpX]. 1 290 24.26 T 23-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 BUMPUSDA_RS03005 b0f34a51c2b11bc3947d05e4fcd4cd0f 404 PANTHER PTHR23501 6 404 3.7E-155 T 23-04-2016 BUMPUSDA_RS03005 b0f34a51c2b11bc3947d05e4fcd4cd0f 404 SUPERFAMILY SSF103473 18 403 3.92E-55 T 23-04-2016 IPR020846 Major facilitator superfamily domain BUMPUSDA_RS03005 b0f34a51c2b11bc3947d05e4fcd4cd0f 404 Gene3D G3DSA:1.20.1250.20 23 205 5.0E-31 T 23-04-2016 BUMPUSDA_RS03005 b0f34a51c2b11bc3947d05e4fcd4cd0f 404 Gene3D G3DSA:1.20.1250.20 226 403 8.5E-13 T 23-04-2016 BUMPUSDA_RS03005 b0f34a51c2b11bc3947d05e4fcd4cd0f 404 ProSitePatterns PS00216 Sugar transport proteins signature 1. 81 97 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BUMPUSDA_RS03005 b0f34a51c2b11bc3947d05e4fcd4cd0f 404 Pfam PF07690 Major Facilitator Superfamily 31 248 1.0E-23 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BUMPUSDA_RS03005 b0f34a51c2b11bc3947d05e4fcd4cd0f 404 PANTHER PTHR23501:SF11 6 404 3.7E-155 T 23-04-2016 BUMPUSDA_RS02825 4ef71631857a63125ae5ac7dd16c4e56 262 SUPERFAMILY SSF53681 1 101 3.27E-29 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 BUMPUSDA_RS02825 4ef71631857a63125ae5ac7dd16c4e56 262 SUPERFAMILY SSF53681 104 256 9.16E-29 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 BUMPUSDA_RS02825 4ef71631857a63125ae5ac7dd16c4e56 262 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 66 74 - T 23-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 BUMPUSDA_RS02825 4ef71631857a63125ae5ac7dd16c4e56 262 Hamap MF_00258 Glutamate racemase [murI]. 1 250 28.364 T 23-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 BUMPUSDA_RS02825 4ef71631857a63125ae5ac7dd16c4e56 262 TIGRFAM TIGR00067 glut_race: glutamate racemase 1 240 7.9E-63 T 23-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 BUMPUSDA_RS02825 4ef71631857a63125ae5ac7dd16c4e56 262 PANTHER PTHR21198 1 256 1.6E-60 T 23-04-2016 BUMPUSDA_RS02825 4ef71631857a63125ae5ac7dd16c4e56 262 PANTHER PTHR21198:SF2 1 256 1.6E-60 T 23-04-2016 BUMPUSDA_RS02825 4ef71631857a63125ae5ac7dd16c4e56 262 Gene3D G3DSA:3.40.50.1860 1 166 7.1E-42 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 BUMPUSDA_RS02825 4ef71631857a63125ae5ac7dd16c4e56 262 Pfam PF01177 Asp/Glu/Hydantoin racemase 4 211 4.1E-21 T 23-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 BUMPUSDA_RS00115 0036d5165557155c52b53ed50ea45acc 165 Hamap MF_01061 Primosomal protein 1 [dnaT]. 1 165 41.03 T 23-04-2016 IPR020917 Primosomal protein 1 GO:0006260 BUMPUSDA_RS00820 450825b4dbbf31076ec8412e243906a5 100 PANTHER PTHR11434 4 100 3.6E-47 T 23-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 BUMPUSDA_RS00820 450825b4dbbf31076ec8412e243906a5 100 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 94 2.6E-20 T 23-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 BUMPUSDA_RS00820 450825b4dbbf31076ec8412e243906a5 100 PANTHER PTHR11434:SF4 4 100 3.6E-47 T 23-04-2016 BUMPUSDA_RS00820 450825b4dbbf31076ec8412e243906a5 100 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 100 17.871 T 23-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 BUMPUSDA_RS01760 c87c8cd70103a5f1d9e6fb3511838723 533 SUPERFAMILY SSF64518 195 525 4.71E-13 T 23-04-2016 BUMPUSDA_RS01760 c87c8cd70103a5f1d9e6fb3511838723 533 PRINTS PR01005 Flagellar hook-associated protein signature 255 277 2.7E-16 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BUMPUSDA_RS01760 c87c8cd70103a5f1d9e6fb3511838723 533 PRINTS PR01005 Flagellar hook-associated protein signature 11 34 2.7E-16 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BUMPUSDA_RS01760 c87c8cd70103a5f1d9e6fb3511838723 533 PRINTS PR01005 Flagellar hook-associated protein signature 152 176 2.7E-16 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BUMPUSDA_RS01760 c87c8cd70103a5f1d9e6fb3511838723 533 PRINTS PR01005 Flagellar hook-associated protein signature 355 377 2.7E-16 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BUMPUSDA_RS01760 c87c8cd70103a5f1d9e6fb3511838723 533 PRINTS PR01005 Flagellar hook-associated protein signature 498 522 2.7E-16 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BUMPUSDA_RS01760 c87c8cd70103a5f1d9e6fb3511838723 533 PRINTS PR01005 Flagellar hook-associated protein signature 452 473 2.7E-16 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BUMPUSDA_RS01760 c87c8cd70103a5f1d9e6fb3511838723 533 PANTHER PTHR30033 1 439 1.5E-19 T 23-04-2016 BUMPUSDA_RS01760 c87c8cd70103a5f1d9e6fb3511838723 533 PANTHER PTHR30033:SF1 1 439 1.5E-19 T 23-04-2016 BUMPUSDA_RS02255 5463cc6e914f61eaada0e546d3897f37 292 SMART SM01091 204 282 7.5E-23 T 23-04-2016 IPR005170 Transporter-associated domain BUMPUSDA_RS02255 5463cc6e914f61eaada0e546d3897f37 292 PANTHER PTHR22777:SF17 17 291 9.9E-107 T 23-04-2016 BUMPUSDA_RS02255 5463cc6e914f61eaada0e546d3897f37 292 SUPERFAMILY SSF56176 203 284 2.26E-19 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 BUMPUSDA_RS02255 5463cc6e914f61eaada0e546d3897f37 292 Gene3D G3DSA:3.30.465.10 197 282 5.7E-27 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 BUMPUSDA_RS02255 5463cc6e914f61eaada0e546d3897f37 292 Pfam PF03471 Transporter associated domain 209 280 1.5E-18 T 23-04-2016 IPR005170 Transporter-associated domain BUMPUSDA_RS02255 5463cc6e914f61eaada0e546d3897f37 292 Pfam PF00571 CBS domain 70 126 8.1E-4 T 23-04-2016 IPR000644 CBS domain BUMPUSDA_RS02255 5463cc6e914f61eaada0e546d3897f37 292 Pfam PF00571 CBS domain 139 188 1.8E-5 T 23-04-2016 IPR000644 CBS domain BUMPUSDA_RS02255 5463cc6e914f61eaada0e546d3897f37 292 PANTHER PTHR22777 17 291 9.9E-107 T 23-04-2016 BUMPUSDA_RS02255 5463cc6e914f61eaada0e546d3897f37 292 Gene3D G3DSA:3.10.580.10 56 196 3.5E-18 T 23-04-2016 BUMPUSDA_RS02255 5463cc6e914f61eaada0e546d3897f37 292 SUPERFAMILY SSF54631 58 199 5.81E-28 T 23-04-2016 BUMPUSDA_RS02630 a7ec1ff4d9843d27f11d96def5760711 65 Pfam PF00831 Ribosomal L29 protein 8 61 4.1E-16 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02630 a7ec1ff4d9843d27f11d96def5760711 65 Gene3D G3DSA:1.10.287.310 7 62 2.1E-18 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02630 a7ec1ff4d9843d27f11d96def5760711 65 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 61 15.078 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02630 a7ec1ff4d9843d27f11d96def5760711 65 PANTHER PTHR10916 15 65 2.1E-14 T 23-04-2016 BUMPUSDA_RS02630 a7ec1ff4d9843d27f11d96def5760711 65 ProSitePatterns PS00579 Ribosomal protein L29 signature. 40 54 - T 23-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02630 a7ec1ff4d9843d27f11d96def5760711 65 TIGRFAM TIGR00012 L29: ribosomal protein uL29 7 61 8.1E-17 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02630 a7ec1ff4d9843d27f11d96def5760711 65 SUPERFAMILY SSF46561 7 62 7.59E-15 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS01885 311c04e2cb344bed8873ba40ce7d155c 128 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 103 121 - T 23-04-2016 IPR019897 RidA, conserved site BUMPUSDA_RS01885 311c04e2cb344bed8873ba40ce7d155c 128 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 2 126 4.9E-45 T 23-04-2016 IPR006056 RidA family BUMPUSDA_RS01885 311c04e2cb344bed8873ba40ce7d155c 128 PANTHER PTHR11803 1 127 7.3E-43 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family BUMPUSDA_RS01885 311c04e2cb344bed8873ba40ce7d155c 128 SUPERFAMILY SSF55298 2 127 1.05E-38 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like BUMPUSDA_RS01885 311c04e2cb344bed8873ba40ce7d155c 128 Gene3D G3DSA:3.30.1330.40 2 126 8.7E-43 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like BUMPUSDA_RS01885 311c04e2cb344bed8873ba40ce7d155c 128 Pfam PF01042 Endoribonuclease L-PSP 7 126 2.2E-38 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family BUMPUSDA_RS01540 b483ff7e0b2efe480b70e700062d7c94 231 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 3 230 42.903 T 23-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 BUMPUSDA_RS01540 b483ff7e0b2efe480b70e700062d7c94 231 SMART SM00855 5 191 7.5E-24 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 BUMPUSDA_RS01540 b483ff7e0b2efe480b70e700062d7c94 231 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 8 17 - T 23-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 BUMPUSDA_RS01540 b483ff7e0b2efe480b70e700062d7c94 231 Gene3D G3DSA:3.40.50.1240 3 228 4.7E-83 T 23-04-2016 IPR029033 Histidine phosphatase superfamily BUMPUSDA_RS01540 b483ff7e0b2efe480b70e700062d7c94 231 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 5 230 2.0E-109 T 23-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 BUMPUSDA_RS01540 b483ff7e0b2efe480b70e700062d7c94 231 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 125 3.3E-28 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 BUMPUSDA_RS01540 b483ff7e0b2efe480b70e700062d7c94 231 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 137 221 8.4E-8 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 BUMPUSDA_RS01540 b483ff7e0b2efe480b70e700062d7c94 231 SUPERFAMILY SSF53254 4 229 4.08E-70 T 23-04-2016 IPR029033 Histidine phosphatase superfamily BUMPUSDA_RS01540 b483ff7e0b2efe480b70e700062d7c94 231 PANTHER PTHR11931 1 230 3.5E-116 T 23-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 BUMPUSDA_RS01925 d220b6e1577a649a60f3110e2c6dfc08 109 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 1.4E-7 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BUMPUSDA_RS01925 d220b6e1577a649a60f3110e2c6dfc08 109 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 1.4E-7 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BUMPUSDA_RS01925 d220b6e1577a649a60f3110e2c6dfc08 109 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 1.4E-7 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BUMPUSDA_RS01925 d220b6e1577a649a60f3110e2c6dfc08 109 Pfam PF03840 Preprotein translocase SecG subunit 4 72 9.8E-10 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BUMPUSDA_RS01925 d220b6e1577a649a60f3110e2c6dfc08 109 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 2 74 4.3E-13 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BUMPUSDA_RS01165 4d65a564e6ea72acbbce0860df0c26e6 239 PRINTS PR00395 Ribosomal protein S2 signature 196 210 1.2E-37 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS01165 4d65a564e6ea72acbbce0860df0c26e6 239 PRINTS PR00395 Ribosomal protein S2 signature 175 186 1.2E-37 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS01165 4d65a564e6ea72acbbce0860df0c26e6 239 PRINTS PR00395 Ribosomal protein S2 signature 6 24 1.2E-37 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS01165 4d65a564e6ea72acbbce0860df0c26e6 239 PRINTS PR00395 Ribosomal protein S2 signature 158 175 1.2E-37 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS01165 4d65a564e6ea72acbbce0860df0c26e6 239 PRINTS PR00395 Ribosomal protein S2 signature 37 46 1.2E-37 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS01165 4d65a564e6ea72acbbce0860df0c26e6 239 PRINTS PR00395 Ribosomal protein S2 signature 87 104 1.2E-37 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS01165 4d65a564e6ea72acbbce0860df0c26e6 239 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 226 39.905 T 23-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 BUMPUSDA_RS01165 4d65a564e6ea72acbbce0860df0c26e6 239 Gene3D G3DSA:1.10.287.610 100 152 2.0E-26 T 23-04-2016 BUMPUSDA_RS01165 4d65a564e6ea72acbbce0860df0c26e6 239 SUPERFAMILY SSF52313 6 221 2.35E-93 T 23-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain BUMPUSDA_RS01165 4d65a564e6ea72acbbce0860df0c26e6 239 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 23-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS01165 4d65a564e6ea72acbbce0860df0c26e6 239 PANTHER PTHR12534 1 221 1.2E-119 T 23-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 BUMPUSDA_RS01165 4d65a564e6ea72acbbce0860df0c26e6 239 Pfam PF00318 Ribosomal protein S2 9 220 3.2E-90 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS01165 4d65a564e6ea72acbbce0860df0c26e6 239 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 23-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 BUMPUSDA_RS01165 4d65a564e6ea72acbbce0860df0c26e6 239 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 221 7.1E-103 T 23-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 BUMPUSDA_RS01165 4d65a564e6ea72acbbce0860df0c26e6 239 Gene3D G3DSA:3.40.50.10490 23 99 6.5E-63 T 23-04-2016 BUMPUSDA_RS01165 4d65a564e6ea72acbbce0860df0c26e6 239 Gene3D G3DSA:3.40.50.10490 158 223 6.5E-63 T 23-04-2016 BUMPUSDA_RS01175 63d90e3ba4701301773a32e3d4da1bf2 242 PIRSF PIRSF005650 4 242 8.1E-82 T 23-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 BUMPUSDA_RS01175 63d90e3ba4701301773a32e3d4da1bf2 242 SUPERFAMILY SSF53633 7 241 7.85E-61 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 BUMPUSDA_RS01175 63d90e3ba4701301773a32e3d4da1bf2 242 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 241 41.375 T 23-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 BUMPUSDA_RS01175 63d90e3ba4701301773a32e3d4da1bf2 242 Pfam PF00696 Amino acid kinase family 11 220 8.3E-21 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 BUMPUSDA_RS01175 63d90e3ba4701301773a32e3d4da1bf2 242 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 241 3.1E-96 T 23-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 BUMPUSDA_RS01175 63d90e3ba4701301773a32e3d4da1bf2 242 PANTHER PTHR21499:SF23 2 242 1.1E-93 T 23-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 BUMPUSDA_RS01175 63d90e3ba4701301773a32e3d4da1bf2 242 Gene3D G3DSA:3.40.1160.10 4 241 4.5E-71 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 BUMPUSDA_RS01175 63d90e3ba4701301773a32e3d4da1bf2 242 PANTHER PTHR21499 2 242 1.1E-93 T 23-04-2016 BUMPUSDA_RS00325 c240d399ff148eb762a48f1c63b6cf03 568 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 4.8E-30 T 23-04-2016 BUMPUSDA_RS00325 c240d399ff148eb762a48f1c63b6cf03 568 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 4.8E-30 T 23-04-2016 BUMPUSDA_RS00325 c240d399ff148eb762a48f1c63b6cf03 568 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 4.8E-30 T 23-04-2016 BUMPUSDA_RS00325 c240d399ff148eb762a48f1c63b6cf03 568 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 4.8E-30 T 23-04-2016 BUMPUSDA_RS00325 c240d399ff148eb762a48f1c63b6cf03 568 PIRSF PIRSF000732 1 568 1.4E-208 T 23-04-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 BUMPUSDA_RS00325 c240d399ff148eb762a48f1c63b6cf03 568 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 254 540 3.6E-116 T 23-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 BUMPUSDA_RS00325 c240d399ff148eb762a48f1c63b6cf03 568 Gene3D G3DSA:3.50.30.10 133 256 6.0E-36 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 BUMPUSDA_RS00325 c240d399ff148eb762a48f1c63b6cf03 568 Pfam PF00391 PEP-utilising enzyme, mobile domain 153 222 4.6E-21 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 BUMPUSDA_RS00325 c240d399ff148eb762a48f1c63b6cf03 568 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 566 1.6E-233 T 23-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 BUMPUSDA_RS00325 c240d399ff148eb762a48f1c63b6cf03 568 SUPERFAMILY SSF47831 24 143 8.24E-29 T 23-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 BUMPUSDA_RS00325 c240d399ff148eb762a48f1c63b6cf03 568 Gene3D G3DSA:1.10.274.10 25 132 4.4E-31 T 23-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 BUMPUSDA_RS00325 c240d399ff148eb762a48f1c63b6cf03 568 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 23-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 BUMPUSDA_RS00325 c240d399ff148eb762a48f1c63b6cf03 568 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 23-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 BUMPUSDA_RS00325 c240d399ff148eb762a48f1c63b6cf03 568 SUPERFAMILY SSF52009 126 245 4.06E-35 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 BUMPUSDA_RS00325 c240d399ff148eb762a48f1c63b6cf03 568 Gene3D G3DSA:3.20.20.60 257 567 3.9E-110 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 BUMPUSDA_RS00325 c240d399ff148eb762a48f1c63b6cf03 568 SUPERFAMILY SSF51621 251 549 3.4E-105 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 BUMPUSDA_RS00325 c240d399ff148eb762a48f1c63b6cf03 568 PANTHER PTHR22931 66 550 1.4E-189 T 23-04-2016 BUMPUSDA_RS00325 c240d399ff148eb762a48f1c63b6cf03 568 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 2.3E-24 T 23-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 BUMPUSDA_RS01280 8344436a0ab01299edc2b77be922048e 94 Pfam PF03658 RnfH family Ubiquitin 4 86 3.7E-28 T 23-04-2016 IPR005346 RnfH protein BUMPUSDA_RS01280 8344436a0ab01299edc2b77be922048e 94 SUPERFAMILY SSF54285 3 77 2.18E-22 T 23-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp BUMPUSDA_RS01280 8344436a0ab01299edc2b77be922048e 94 Hamap MF_00460 Protein RnfH [rnfH]. 4 94 20.506 T 23-04-2016 IPR005346 RnfH protein BUMPUSDA_RS01280 8344436a0ab01299edc2b77be922048e 94 Gene3D G3DSA:3.10.20.280 2 88 1.1E-29 T 23-04-2016 IPR005346 RnfH protein BUMPUSDA_RS01280 8344436a0ab01299edc2b77be922048e 94 PANTHER PTHR37483:SF1 1 87 1.6E-24 T 23-04-2016 BUMPUSDA_RS01280 8344436a0ab01299edc2b77be922048e 94 PANTHER PTHR37483 1 87 1.6E-24 T 23-04-2016 BUMPUSDA_RS00205 132a3281cd4bc49d734bea5e84bd005b 127 Hamap MF_00422 Protein translocase subunit SecE [secE]. 66 121 12.597 T 23-04-2016 IPR022943 Preprotein translocase subunit SecE BUMPUSDA_RS00205 132a3281cd4bc49d734bea5e84bd005b 127 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 70 122 2.9E-16 T 23-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 BUMPUSDA_RS00205 132a3281cd4bc49d734bea5e84bd005b 127 PRINTS PR01650 Bacterial translocase SecE signature 89 109 7.6E-26 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 BUMPUSDA_RS00205 132a3281cd4bc49d734bea5e84bd005b 127 PRINTS PR01650 Bacterial translocase SecE signature 65 85 7.6E-26 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 BUMPUSDA_RS00205 132a3281cd4bc49d734bea5e84bd005b 127 PRINTS PR01650 Bacterial translocase SecE signature 109 125 7.6E-26 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 BUMPUSDA_RS00205 132a3281cd4bc49d734bea5e84bd005b 127 PRINTS PR01650 Bacterial translocase SecE signature 44 65 7.6E-26 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 BUMPUSDA_RS00205 132a3281cd4bc49d734bea5e84bd005b 127 PANTHER PTHR33910:SF1 1 126 2.3E-21 T 23-04-2016 BUMPUSDA_RS00205 132a3281cd4bc49d734bea5e84bd005b 127 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 68 123 6.6E-18 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 BUMPUSDA_RS00205 132a3281cd4bc49d734bea5e84bd005b 127 Gene3D G3DSA:1.20.5.1030 64 123 1.4E-19 T 23-04-2016 BUMPUSDA_RS00205 132a3281cd4bc49d734bea5e84bd005b 127 PANTHER PTHR33910 1 126 2.3E-21 T 23-04-2016 BUMPUSDA_RS02700 985b1658e9d7a7750cc134e04531f2f6 95 SUPERFAMILY SSF75169 1 95 1.04E-26 T 23-04-2016 IPR027396 DsrEFH-like BUMPUSDA_RS02700 985b1658e9d7a7750cc134e04531f2f6 95 Hamap MF_01564 Protein TusB [tusB]. 1 95 26.749 T 23-04-2016 IPR023526 Sulphur relay, TusB GO:0002143|GO:0005737 BUMPUSDA_RS02700 985b1658e9d7a7750cc134e04531f2f6 95 Pfam PF04077 DsrH like protein 7 92 3.2E-23 T 23-04-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 BUMPUSDA_RS02700 985b1658e9d7a7750cc134e04531f2f6 95 PANTHER PTHR37526 1 95 8.0E-24 T 23-04-2016 BUMPUSDA_RS02700 985b1658e9d7a7750cc134e04531f2f6 95 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 95 4.5E-27 T 23-04-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 BUMPUSDA_RS02700 985b1658e9d7a7750cc134e04531f2f6 95 Gene3D G3DSA:3.40.1260.10 1 94 4.1E-26 T 23-04-2016 IPR027396 DsrEFH-like BUMPUSDA_RS00300 a6feea0aae22302542d3fdcb8ae72f3d 212 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 11 212 37.664 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 BUMPUSDA_RS00300 a6feea0aae22302542d3fdcb8ae72f3d 212 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 18 208 1.9E-76 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 BUMPUSDA_RS00300 a6feea0aae22302542d3fdcb8ae72f3d 212 SUPERFAMILY SSF55821 8 210 6.18E-79 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain BUMPUSDA_RS00300 a6feea0aae22302542d3fdcb8ae72f3d 212 PANTHER PTHR21327:SF15 1 212 1.8E-133 T 23-04-2016 BUMPUSDA_RS00300 a6feea0aae22302542d3fdcb8ae72f3d 212 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 13 208 1.6E-75 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 BUMPUSDA_RS00300 a6feea0aae22302542d3fdcb8ae72f3d 212 Gene3D G3DSA:3.90.870.10 11 211 7.3E-85 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain BUMPUSDA_RS00300 a6feea0aae22302542d3fdcb8ae72f3d 212 PANTHER PTHR21327 1 212 1.8E-133 T 23-04-2016 BUMPUSDA_RS02395 cadf575e5c55d1be44481d8fd125071f 665 PANTHER PTHR10422:SF26 33 619 0.0 T 23-04-2016 BUMPUSDA_RS02395 cadf575e5c55d1be44481d8fd125071f 665 Gene3D G3DSA:1.20.210.10 39 577 1.1E-186 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 BUMPUSDA_RS02395 cadf575e5c55d1be44481d8fd125071f 665 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 23-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 BUMPUSDA_RS02395 cadf575e5c55d1be44481d8fd125071f 665 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 652 0.0 T 23-04-2016 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 BUMPUSDA_RS02395 cadf575e5c55d1be44481d8fd125071f 665 SUPERFAMILY SSF81442 43 559 2.09E-178 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 BUMPUSDA_RS02395 cadf575e5c55d1be44481d8fd125071f 665 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 503 5.4E-135 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 BUMPUSDA_RS02395 cadf575e5c55d1be44481d8fd125071f 665 PANTHER PTHR10422 33 619 0.0 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 BUMPUSDA_RS02395 cadf575e5c55d1be44481d8fd125071f 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 1.8E-96 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 BUMPUSDA_RS02395 cadf575e5c55d1be44481d8fd125071f 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 1.8E-96 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 BUMPUSDA_RS02395 cadf575e5c55d1be44481d8fd125071f 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 1.8E-96 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 BUMPUSDA_RS02395 cadf575e5c55d1be44481d8fd125071f 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 1.8E-96 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 BUMPUSDA_RS02395 cadf575e5c55d1be44481d8fd125071f 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 1.8E-96 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 BUMPUSDA_RS02395 cadf575e5c55d1be44481d8fd125071f 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 1.8E-96 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 BUMPUSDA_RS02395 cadf575e5c55d1be44481d8fd125071f 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 1.8E-96 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 BUMPUSDA_RS02395 cadf575e5c55d1be44481d8fd125071f 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 1.8E-96 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 BUMPUSDA_RS02395 cadf575e5c55d1be44481d8fd125071f 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 1.8E-96 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 BUMPUSDA_RS02395 cadf575e5c55d1be44481d8fd125071f 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 1.8E-96 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 BUMPUSDA_RS02395 cadf575e5c55d1be44481d8fd125071f 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 1.8E-96 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 BUMPUSDA_RS02395 cadf575e5c55d1be44481d8fd125071f 665 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 1.8E-96 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 BUMPUSDA_RS01965 5f8c58d2a6e5e69ba1122923fb19c5d6 84 PRINTS PR00063 Ribosomal protein L27 signature 54 78 5.7E-38 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS01965 5f8c58d2a6e5e69ba1122923fb19c5d6 84 PRINTS PR00063 Ribosomal protein L27 signature 29 53 5.7E-38 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS01965 5f8c58d2a6e5e69ba1122923fb19c5d6 84 PRINTS PR00063 Ribosomal protein L27 signature 4 28 5.7E-38 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS01965 5f8c58d2a6e5e69ba1122923fb19c5d6 84 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 83 27.35 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS01965 5f8c58d2a6e5e69ba1122923fb19c5d6 84 SUPERFAMILY SSF110324 2 81 6.98E-34 T 23-04-2016 BUMPUSDA_RS01965 5f8c58d2a6e5e69ba1122923fb19c5d6 84 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 2.2E-40 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS01965 5f8c58d2a6e5e69ba1122923fb19c5d6 84 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 62 1.0E-12 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS01965 5f8c58d2a6e5e69ba1122923fb19c5d6 84 PANTHER PTHR15893 1 83 1.7E-43 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS01965 5f8c58d2a6e5e69ba1122923fb19c5d6 84 Gene3D G3DSA:2.40.50.100 20 82 1.2E-30 T 23-04-2016 BUMPUSDA_RS01965 5f8c58d2a6e5e69ba1122923fb19c5d6 84 Pfam PF01016 Ribosomal L27 protein 2 82 4.0E-38 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02695 0590e7c0cb4ca3cd4e15229b6c8760eb 124 Pfam PF00164 Ribosomal protein S12/S23 11 123 4.8E-43 T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02695 0590e7c0cb4ca3cd4e15229b6c8760eb 124 SUPERFAMILY SSF50249 3 123 2.14E-52 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS02695 0590e7c0cb4ca3cd4e15229b6c8760eb 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 1.3E-59 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 BUMPUSDA_RS02695 0590e7c0cb4ca3cd4e15229b6c8760eb 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 1.3E-59 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 BUMPUSDA_RS02695 0590e7c0cb4ca3cd4e15229b6c8760eb 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 1.3E-59 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 BUMPUSDA_RS02695 0590e7c0cb4ca3cd4e15229b6c8760eb 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 1.3E-59 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 BUMPUSDA_RS02695 0590e7c0cb4ca3cd4e15229b6c8760eb 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 1.3E-59 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 BUMPUSDA_RS02695 0590e7c0cb4ca3cd4e15229b6c8760eb 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 1.3E-59 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 BUMPUSDA_RS02695 0590e7c0cb4ca3cd4e15229b6c8760eb 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02695 0590e7c0cb4ca3cd4e15229b6c8760eb 124 Gene3D G3DSA:2.40.50.140 1 123 9.7E-65 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold BUMPUSDA_RS02695 0590e7c0cb4ca3cd4e15229b6c8760eb 124 PIRSF PIRSF002133 1 124 1.1E-54 T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02695 0590e7c0cb4ca3cd4e15229b6c8760eb 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.74 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 BUMPUSDA_RS02695 0590e7c0cb4ca3cd4e15229b6c8760eb 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 5.8E-69 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 BUMPUSDA_RS02695 0590e7c0cb4ca3cd4e15229b6c8760eb 124 PANTHER PTHR11652 1 116 2.2E-75 T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BUMPUSDA_RS02335 8f836c7060d73a36efd692a0bc43a56d 158 PANTHER PTHR21058 1 158 1.3E-60 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 BUMPUSDA_RS02335 8f836c7060d73a36efd692a0bc43a56d 158 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 15 151 2.8E-46 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 BUMPUSDA_RS02335 8f836c7060d73a36efd692a0bc43a56d 158 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 14 152 2.3E-45 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 BUMPUSDA_RS02335 8f836c7060d73a36efd692a0bc43a56d 158 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 27.23 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 BUMPUSDA_RS02335 8f836c7060d73a36efd692a0bc43a56d 158 Gene3D G3DSA:3.40.50.960 2 152 1.3E-51 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 BUMPUSDA_RS02335 8f836c7060d73a36efd692a0bc43a56d 158 SUPERFAMILY SSF52121 4 154 3.66E-50 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 BUMPUSDA_RS01405 29675da96b252882628259d21f11836f 399 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 389 48.096 T 23-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 BUMPUSDA_RS01405 29675da96b252882628259d21f11836f 399 SUPERFAMILY SSF53686 4 388 2.1E-140 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme BUMPUSDA_RS01405 29675da96b252882628259d21f11836f 399 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 23-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 BUMPUSDA_RS01405 29675da96b252882628259d21f11836f 399 Gene3D G3DSA:3.40.50.1100 99 174 6.3E-21 T 23-04-2016 BUMPUSDA_RS01405 29675da96b252882628259d21f11836f 399 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 372 4.9E-50 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme BUMPUSDA_RS01405 29675da96b252882628259d21f11836f 399 PANTHER PTHR10314 6 397 2.0E-219 T 23-04-2016 BUMPUSDA_RS01405 29675da96b252882628259d21f11836f 399 PIRSF PIRSF001413 1 395 1.4E-164 T 23-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 BUMPUSDA_RS01405 29675da96b252882628259d21f11836f 399 PANTHER PTHR10314:SF3 6 397 2.0E-219 T 23-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 BUMPUSDA_RS01405 29675da96b252882628259d21f11836f 399 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 7 387 2.4E-186 T 23-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 BUMPUSDA_RS01405 29675da96b252882628259d21f11836f 399 Gene3D G3DSA:3.40.50.1100 175 391 5.8E-91 T 23-04-2016 BUMPUSDA_RS02070 e78c2cc6351a1d31d1b873b98629600e 226 Pfam PF04231 Endonuclease I 10 220 7.1E-36 T 23-04-2016 IPR007346 Endonuclease I GO:0004518 BUMPUSDA_RS02070 e78c2cc6351a1d31d1b873b98629600e 226 PANTHER PTHR33607 15 220 1.6E-38 T 23-04-2016 BUMPUSDA_RS02070 e78c2cc6351a1d31d1b873b98629600e 226 SUPERFAMILY SSF54060 18 223 6.71E-80 T 23-04-2016 BUMPUSDA_RS00565 72f750fb19d5edd635b3f2a49cb1e587 193 PANTHER PTHR30335 2 193 5.5E-90 T 23-04-2016 BUMPUSDA_RS00565 72f750fb19d5edd635b3f2a49cb1e587 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 1.5E-80 T 23-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 BUMPUSDA_RS00565 72f750fb19d5edd635b3f2a49cb1e587 193 PIRSF PIRSF006102 1 193 7.5E-48 T 23-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 BUMPUSDA_RS00565 72f750fb19d5edd635b3f2a49cb1e587 193 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 2 191 23.667 T 23-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 BUMPUSDA_RS00565 72f750fb19d5edd635b3f2a49cb1e587 193 PANTHER PTHR30335:SF0 2 193 5.5E-90 T 23-04-2016 BUMPUSDA_RS00565 72f750fb19d5edd635b3f2a49cb1e587 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 1.2E-50 T 23-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 BUMPUSDA_RS01625 df3e1d86f40edf30e3855f913178b3ac 186 SUPERFAMILY SSF53807 8 179 8.83E-38 T 23-04-2016 BUMPUSDA_RS01625 df3e1d86f40edf30e3855f913178b3ac 186 PANTHER PTHR30477 12 164 8.5E-34 T 23-04-2016 BUMPUSDA_RS01625 df3e1d86f40edf30e3855f913178b3ac 186 PANTHER PTHR30477:SF1 12 164 8.5E-34 T 23-04-2016 BUMPUSDA_RS01625 df3e1d86f40edf30e3855f913178b3ac 186 Gene3D G3DSA:3.40.50.1980 70 180 4.2E-23 T 23-04-2016 BUMPUSDA_RS01625 df3e1d86f40edf30e3855f913178b3ac 186 Gene3D G3DSA:3.40.50.1980 10 67 3.3E-9 T 23-04-2016 BUMPUSDA_RS01625 df3e1d86f40edf30e3855f913178b3ac 186 Pfam PF01297 Zinc-uptake complex component A periplasmic 13 171 2.0E-27 T 23-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 BUMPUSDA_RS02490 a325be77c6c5f98536de8b9e7525f0a2 87 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 1 87 24.95 T 23-04-2016 IPR007454 Uncharacterised protein family UPF0250 BUMPUSDA_RS02490 a325be77c6c5f98536de8b9e7525f0a2 87 PANTHER PTHR38036 1 87 2.0E-30 T 23-04-2016 BUMPUSDA_RS02490 a325be77c6c5f98536de8b9e7525f0a2 87 Gene3D G3DSA:3.30.70.1460 1 87 1.9E-28 T 23-04-2016 IPR027471 YbeD-like domain BUMPUSDA_RS02490 a325be77c6c5f98536de8b9e7525f0a2 87 SUPERFAMILY SSF117991 1 87 1.15E-26 T 23-04-2016 IPR027471 YbeD-like domain BUMPUSDA_RS02490 a325be77c6c5f98536de8b9e7525f0a2 87 Pfam PF04359 Protein of unknown function (DUF493) 7 87 2.0E-22 T 23-04-2016 IPR007454 Uncharacterised protein family UPF0250 BUMPUSDA_RS02490 a325be77c6c5f98536de8b9e7525f0a2 87 PANTHER PTHR38036:SF1 1 87 2.0E-30 T 23-04-2016 BUMPUSDA_RS01775 c10fda2e8d3fc1a335852a17f7745b82 54 SUPERFAMILY SSF57829 2 54 2.26E-17 T 23-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 BUMPUSDA_RS01775 c10fda2e8d3fc1a335852a17f7745b82 54 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 16.945 T 23-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 BUMPUSDA_RS01775 c10fda2e8d3fc1a335852a17f7745b82 54 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 9.5E-19 T 23-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 BUMPUSDA_RS01775 c10fda2e8d3fc1a335852a17f7745b82 54 PANTHER PTHR35534 1 54 4.8E-25 T 23-04-2016 BUMPUSDA_RS01775 c10fda2e8d3fc1a335852a17f7745b82 54 Pfam PF01783 Ribosomal L32p protein family 2 54 5.2E-17 T 23-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 BUMPUSDA_RS01355 35be38fd1c8d5ee4269f4ee7768421ae 215 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 8 206 3.5E-66 T 23-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 BUMPUSDA_RS01355 35be38fd1c8d5ee4269f4ee7768421ae 215 PANTHER PTHR33508:SF1 4 215 1.9E-84 T 23-04-2016 BUMPUSDA_RS01355 35be38fd1c8d5ee4269f4ee7768421ae 215 PANTHER PTHR33508 4 215 1.9E-84 T 23-04-2016 BUMPUSDA_RS01355 35be38fd1c8d5ee4269f4ee7768421ae 215 Pfam PF01914 MarC family integral membrane protein 9 210 8.3E-64 T 23-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 BUMPUSDA_RS00645 0493e57f9e575abfce329ce36dd33b3c 329 SUPERFAMILY SSF55681 91 327 6.06E-74 T 23-04-2016 BUMPUSDA_RS00645 0493e57f9e575abfce329ce36dd33b3c 329 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 40 327 1.5E-98 T 23-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 BUMPUSDA_RS00645 0493e57f9e575abfce329ce36dd33b3c 329 Gene3D G3DSA:3.30.930.10 11 327 7.4E-116 T 23-04-2016 BUMPUSDA_RS00645 0493e57f9e575abfce329ce36dd33b3c 329 Pfam PF01409 tRNA synthetases class II core domain (F) 91 326 2.5E-98 T 23-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 BUMPUSDA_RS00645 0493e57f9e575abfce329ce36dd33b3c 329 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 86 2.6E-15 T 23-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 BUMPUSDA_RS00645 0493e57f9e575abfce329ce36dd33b3c 329 SUPERFAMILY SSF46589 14 99 1.31E-16 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 BUMPUSDA_RS00645 0493e57f9e575abfce329ce36dd33b3c 329 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 43.977 T 23-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 BUMPUSDA_RS00645 0493e57f9e575abfce329ce36dd33b3c 329 PANTHER PTHR11538 90 329 5.6E-88 T 23-04-2016 BUMPUSDA_RS01880 b58cbbf7460a046ed6d63759e3e41e13 153 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 4 151 4.7E-57 T 23-04-2016 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 BUMPUSDA_RS01880 b58cbbf7460a046ed6d63759e3e41e13 153 Gene3D G3DSA:3.30.70.140 3 94 5.3E-33 T 23-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal BUMPUSDA_RS01880 b58cbbf7460a046ed6d63759e3e41e13 153 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 3 152 30.62 T 23-04-2016 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 BUMPUSDA_RS01880 b58cbbf7460a046ed6d63759e3e41e13 153 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 6 94 1.3E-27 T 23-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal BUMPUSDA_RS01880 b58cbbf7460a046ed6d63759e3e41e13 153 PANTHER PTHR35805 1 153 1.2E-56 T 23-04-2016 BUMPUSDA_RS01880 b58cbbf7460a046ed6d63759e3e41e13 153 PANTHER PTHR35805:SF1 1 153 1.2E-56 T 23-04-2016 BUMPUSDA_RS01880 b58cbbf7460a046ed6d63759e3e41e13 153 SUPERFAMILY SSF57825 101 151 2.09E-12 T 23-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal BUMPUSDA_RS01880 b58cbbf7460a046ed6d63759e3e41e13 153 SUPERFAMILY SSF54893 3 99 3.27E-32 T 23-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal BUMPUSDA_RS01880 b58cbbf7460a046ed6d63759e3e41e13 153 Gene3D G3DSA:2.30.30.20 100 151 9.4E-17 T 23-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal BUMPUSDA_RS01880 b58cbbf7460a046ed6d63759e3e41e13 153 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 8 98 8.0E-41 T 23-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal BUMPUSDA_RS01880 b58cbbf7460a046ed6d63759e3e41e13 153 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 101 149 1.2E-13 T 23-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal BUMPUSDA_RS00620 11e1f1258701037e98cab1ec296b78b9 348 PANTHER PTHR21225 1 348 3.5E-230 T 23-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 BUMPUSDA_RS00620 11e1f1258701037e98cab1ec296b78b9 348 PANTHER PTHR21225:SF6 1 348 3.5E-230 T 23-04-2016 BUMPUSDA_RS00620 11e1f1258701037e98cab1ec296b78b9 348 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 348 2.5E-173 T 23-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 BUMPUSDA_RS00620 11e1f1258701037e98cab1ec296b78b9 348 Pfam PF00793 DAHP synthetase I family 40 336 7.0E-106 T 23-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 BUMPUSDA_RS00620 11e1f1258701037e98cab1ec296b78b9 348 PIRSF PIRSF001361 1 348 3.6E-151 T 23-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 BUMPUSDA_RS00620 11e1f1258701037e98cab1ec296b78b9 348 Gene3D G3DSA:3.20.20.70 9 347 6.0E-138 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 BUMPUSDA_RS00620 11e1f1258701037e98cab1ec296b78b9 348 SUPERFAMILY SSF51569 7 347 2.72E-126 T 23-04-2016 BUMPUSDA_RS01985 e03ecd0978982f78f1bb8251ddc6cd46 385 SMART SM00830 11 91 2.7E-24 T 23-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 BUMPUSDA_RS01985 e03ecd0978982f78f1bb8251ddc6cd46 385 PANTHER PTHR21022:SF0 5 379 9.9E-123 T 23-04-2016 BUMPUSDA_RS01985 e03ecd0978982f78f1bb8251ddc6cd46 385 Gene3D G3DSA:3.40.190.10 194 273 2.3E-27 T 23-04-2016 BUMPUSDA_RS01985 e03ecd0978982f78f1bb8251ddc6cd46 385 Pfam PF00800 Prephenate dehydratase 107 287 2.7E-57 T 23-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 BUMPUSDA_RS01985 e03ecd0978982f78f1bb8251ddc6cd46 385 Gene3D G3DSA:1.20.59.10 2 107 6.9E-33 T 23-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 BUMPUSDA_RS01985 e03ecd0978982f78f1bb8251ddc6cd46 385 Pfam PF01817 Chorismate mutase type II 11 88 1.0E-17 T 23-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 BUMPUSDA_RS01985 e03ecd0978982f78f1bb8251ddc6cd46 385 PIRSF PIRSF001500 1 380 8.0E-135 T 23-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 BUMPUSDA_RS01985 e03ecd0978982f78f1bb8251ddc6cd46 385 SUPERFAMILY SSF53850 107 291 1.63E-54 T 23-04-2016 BUMPUSDA_RS01985 e03ecd0978982f78f1bb8251ddc6cd46 385 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 7 88 5.5E-33 T 23-04-2016 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00121 BUMPUSDA_RS01985 e03ecd0978982f78f1bb8251ddc6cd46 385 Gene3D G3DSA:3.30.70.260 295 378 1.6E-21 T 23-04-2016 BUMPUSDA_RS01985 e03ecd0978982f78f1bb8251ddc6cd46 385 PANTHER PTHR21022 5 379 9.9E-123 T 23-04-2016 BUMPUSDA_RS01985 e03ecd0978982f78f1bb8251ddc6cd46 385 Gene3D G3DSA:3.40.190.10 108 193 1.3E-26 T 23-04-2016 BUMPUSDA_RS01985 e03ecd0978982f78f1bb8251ddc6cd46 385 SUPERFAMILY SSF55021 280 377 8.5E-21 T 23-04-2016 BUMPUSDA_RS01985 e03ecd0978982f78f1bb8251ddc6cd46 385 SUPERFAMILY SSF48600 6 94 1.52E-21 T 23-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 BUMPUSDA_RS01985 e03ecd0978982f78f1bb8251ddc6cd46 385 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 261 283 - T 23-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 BUMPUSDA_RS00420 591f6a1da182059bbc0c3b6cdd9bafd1 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 6.7E-32 T 23-04-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 BUMPUSDA_RS00420 591f6a1da182059bbc0c3b6cdd9bafd1 89 PANTHER PTHR34040:SF2 1 89 1.6E-34 T 23-04-2016 BUMPUSDA_RS00420 591f6a1da182059bbc0c3b6cdd9bafd1 89 PANTHER PTHR34040 1 89 1.6E-34 T 23-04-2016 BUMPUSDA_RS00420 591f6a1da182059bbc0c3b6cdd9bafd1 89 PIRSF PIRSF004669 1 89 1.0E-30 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BUMPUSDA_RS00420 591f6a1da182059bbc0c3b6cdd9bafd1 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 3.5E-22 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BUMPUSDA_RS00420 591f6a1da182059bbc0c3b6cdd9bafd1 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 3.5E-22 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BUMPUSDA_RS00420 591f6a1da182059bbc0c3b6cdd9bafd1 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 3.5E-22 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BUMPUSDA_RS00420 591f6a1da182059bbc0c3b6cdd9bafd1 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 3.9E-29 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BUMPUSDA_RS01270 c9943c5311a2d0cc4e2c065446460fee 153 PANTHER PTHR39563 2 153 3.8E-84 T 23-04-2016 BUMPUSDA_RS01270 c9943c5311a2d0cc4e2c065446460fee 153 Pfam PF00156 Phosphoribosyl transferase domain 12 144 2.8E-15 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 BUMPUSDA_RS01270 c9943c5311a2d0cc4e2c065446460fee 153 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 153 38.737 T 23-04-2016 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 BUMPUSDA_RS01270 c9943c5311a2d0cc4e2c065446460fee 153 Gene3D G3DSA:3.40.50.2020 1 146 1.9E-40 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like BUMPUSDA_RS01270 c9943c5311a2d0cc4e2c065446460fee 153 SUPERFAMILY SSF53271 4 142 2.15E-31 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like BUMPUSDA_RS02795 bd9edf988911acfa25e42805a7453124 139 SUPERFAMILY SSF53098 1 134 7.13E-35 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 BUMPUSDA_RS02795 bd9edf988911acfa25e42805a7453124 139 PANTHER PTHR33317 1 133 3.4E-35 T 23-04-2016 BUMPUSDA_RS02795 bd9edf988911acfa25e42805a7453124 139 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 4 133 3.1E-39 T 23-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 BUMPUSDA_RS02795 bd9edf988911acfa25e42805a7453124 139 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 1 136 22.541 T 23-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 BUMPUSDA_RS02795 bd9edf988911acfa25e42805a7453124 139 Gene3D G3DSA:3.30.420.140 2 135 5.3E-37 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 BUMPUSDA_RS02795 bd9edf988911acfa25e42805a7453124 139 SMART SM00732 1 101 2.4E-30 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 BUMPUSDA_RS02795 bd9edf988911acfa25e42805a7453124 139 Pfam PF03652 Holliday junction resolvase 1 134 8.9E-36 T 23-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 BUMPUSDA_RS02745 95fdf008c9f98dc9f0744047e1b92b97 173 Pfam PF01202 Shikimate kinase 13 170 9.9E-54 T 23-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 BUMPUSDA_RS02745 95fdf008c9f98dc9f0744047e1b92b97 173 Gene3D G3DSA:3.40.50.300 2 171 1.4E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02745 95fdf008c9f98dc9f0744047e1b92b97 173 SUPERFAMILY SSF52540 4 170 2.1E-28 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS02745 95fdf008c9f98dc9f0744047e1b92b97 173 Hamap MF_00109 Shikimate kinase [aroK]. 4 171 27.983 T 23-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 BUMPUSDA_RS02745 95fdf008c9f98dc9f0744047e1b92b97 173 PRINTS PR01100 Shikimate kinase family signature 31 44 5.0E-28 T 23-04-2016 BUMPUSDA_RS02745 95fdf008c9f98dc9f0744047e1b92b97 173 PRINTS PR01100 Shikimate kinase family signature 59 67 5.0E-28 T 23-04-2016 BUMPUSDA_RS02745 95fdf008c9f98dc9f0744047e1b92b97 173 PRINTS PR01100 Shikimate kinase family signature 98 115 5.0E-28 T 23-04-2016 BUMPUSDA_RS02745 95fdf008c9f98dc9f0744047e1b92b97 173 PRINTS PR01100 Shikimate kinase family signature 77 86 5.0E-28 T 23-04-2016 BUMPUSDA_RS02745 95fdf008c9f98dc9f0744047e1b92b97 173 PRINTS PR01100 Shikimate kinase family signature 7 22 5.0E-28 T 23-04-2016 BUMPUSDA_RS02745 95fdf008c9f98dc9f0744047e1b92b97 173 PANTHER PTHR21087 1 170 3.3E-62 T 23-04-2016 BUMPUSDA_RS02745 95fdf008c9f98dc9f0744047e1b92b97 173 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 23-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 BUMPUSDA_RS00070 145da60d26afad7b785448dc47d1123a 114 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 111 13.688 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 BUMPUSDA_RS00070 145da60d26afad7b785448dc47d1123a 114 PANTHER PTHR33992 2 114 2.0E-22 T 23-04-2016 BUMPUSDA_RS00070 145da60d26afad7b785448dc47d1123a 114 SUPERFAMILY SSF54211 4 112 2.1E-22 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold BUMPUSDA_RS00070 145da60d26afad7b785448dc47d1123a 114 Gene3D G3DSA:3.30.230.10 5 110 1.3E-23 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BUMPUSDA_RS00070 145da60d26afad7b785448dc47d1123a 114 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 15 90 1.0E-26 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 BUMPUSDA_RS00070 145da60d26afad7b785448dc47d1123a 114 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 23-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 BUMPUSDA_RS00070 145da60d26afad7b785448dc47d1123a 114 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 7 111 2.6E-23 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 BUMPUSDA_RS00070 145da60d26afad7b785448dc47d1123a 114 Pfam PF00825 Ribonuclease P 6 111 2.3E-24 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 BUMPUSDA_RS00790 ee6126f99392418e47635267240ce1bc 159 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 14 159 6.4E-55 T 23-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 BUMPUSDA_RS00790 ee6126f99392418e47635267240ce1bc 159 PANTHER PTHR10371:SF7 5 159 8.0E-86 T 23-04-2016 BUMPUSDA_RS00790 ee6126f99392418e47635267240ce1bc 159 PIRSF PIRSF000216 2 159 4.4E-51 T 23-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 BUMPUSDA_RS00790 ee6126f99392418e47635267240ce1bc 159 PANTHER PTHR10371 5 159 8.0E-86 T 23-04-2016 BUMPUSDA_RS00790 ee6126f99392418e47635267240ce1bc 159 SUPERFAMILY SSF52833 8 158 8.39E-45 T 23-04-2016 IPR012336 Thioredoxin-like fold BUMPUSDA_RS00790 ee6126f99392418e47635267240ce1bc 159 Gene3D G3DSA:3.40.30.10 80 157 3.8E-6 T 23-04-2016 IPR012336 Thioredoxin-like fold BUMPUSDA_RS00790 ee6126f99392418e47635267240ce1bc 159 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 17 159 1.1E-48 T 23-04-2016 BUMPUSDA_RS02235 e7e75612b5d3484b0890bf248c5239d1 298 PANTHER PTHR30589:SF0 1 287 4.4E-100 T 23-04-2016 BUMPUSDA_RS02235 e7e75612b5d3484b0890bf248c5239d1 298 PANTHER PTHR30589 1 287 4.4E-100 T 23-04-2016 BUMPUSDA_RS02235 e7e75612b5d3484b0890bf248c5239d1 298 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 3 282 2.0E-83 T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 BUMPUSDA_RS02235 e7e75612b5d3484b0890bf248c5239d1 298 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 139 151 - T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 BUMPUSDA_RS02235 e7e75612b5d3484b0890bf248c5239d1 298 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 7 281 18.929 T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 BUMPUSDA_RS02235 e7e75612b5d3484b0890bf248c5239d1 298 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 10 275 1.5E-70 T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 BUMPUSDA_RS01200 38728836940d49e9d643281b4295dc7a 151 Pfam PF07977 FabA-like domain 17 140 1.7E-31 T 23-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 BUMPUSDA_RS01200 38728836940d49e9d643281b4295dc7a 151 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 32.798 T 23-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 BUMPUSDA_RS01200 38728836940d49e9d643281b4295dc7a 151 Gene3D G3DSA:3.10.129.10 2 146 4.9E-48 T 23-04-2016 IPR029069 HotDog domain BUMPUSDA_RS01200 38728836940d49e9d643281b4295dc7a 151 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 3.9E-51 T 23-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 BUMPUSDA_RS01200 38728836940d49e9d643281b4295dc7a 151 PANTHER PTHR30272 4 151 8.6E-64 T 23-04-2016 BUMPUSDA_RS01200 38728836940d49e9d643281b4295dc7a 151 SUPERFAMILY SSF54637 7 146 2.96E-40 T 23-04-2016 IPR029069 HotDog domain BUMPUSDA_RS02370 f165ad81a110fae8d5a55a2e49f88edf 393 SUPERFAMILY SSF103473 10 385 6.02E-49 T 23-04-2016 IPR020846 Major facilitator superfamily domain BUMPUSDA_RS02370 f165ad81a110fae8d5a55a2e49f88edf 393 PANTHER PTHR23510 2 380 3.9E-93 T 23-04-2016 BUMPUSDA_RS02370 f165ad81a110fae8d5a55a2e49f88edf 393 Gene3D G3DSA:1.20.1250.20 206 385 3.0E-9 T 23-04-2016 BUMPUSDA_RS02370 f165ad81a110fae8d5a55a2e49f88edf 393 Gene3D G3DSA:1.20.1250.20 10 189 1.4E-31 T 23-04-2016 BUMPUSDA_RS02370 f165ad81a110fae8d5a55a2e49f88edf 393 Pfam PF07690 Major Facilitator Superfamily 13 340 3.3E-31 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BUMPUSDA_RS02370 f165ad81a110fae8d5a55a2e49f88edf 393 PANTHER PTHR23510:SF6 2 380 3.9E-93 T 23-04-2016 BUMPUSDA_RS02805 afb50dd687d38de1e24197386080d2eb 376 SMART SM00729 6 222 7.5E-50 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 BUMPUSDA_RS02805 afb50dd687d38de1e24197386080d2eb 376 PANTHER PTHR13932 6 375 5.1E-150 T 23-04-2016 BUMPUSDA_RS02805 afb50dd687d38de1e24197386080d2eb 376 PANTHER PTHR13932:SF7 6 375 5.1E-150 T 23-04-2016 BUMPUSDA_RS02805 afb50dd687d38de1e24197386080d2eb 376 Pfam PF04055 Radical SAM superfamily 11 174 3.6E-15 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 BUMPUSDA_RS02805 afb50dd687d38de1e24197386080d2eb 376 Gene3D G3DSA:3.80.30.20 7 238 1.5E-35 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe BUMPUSDA_RS02805 afb50dd687d38de1e24197386080d2eb 376 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 8 367 2.5E-113 T 23-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- BUMPUSDA_RS02805 afb50dd687d38de1e24197386080d2eb 376 SUPERFAMILY SSF102114 6 375 6.54E-95 T 23-04-2016 BUMPUSDA_RS01660 363dfb420f1ce54aaaed378971908357 88 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 88 7.7E-29 T 23-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 BUMPUSDA_RS01660 363dfb420f1ce54aaaed378971908357 88 Gene3D G3DSA:3.30.1070.10 38 88 2.2E-20 T 23-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 BUMPUSDA_RS01660 363dfb420f1ce54aaaed378971908357 88 SUPERFAMILY SSF55229 38 87 2.35E-15 T 23-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 BUMPUSDA_RS01660 363dfb420f1ce54aaaed378971908357 88 Pfam PF03776 Septum formation topological specificity factor MinE 20 87 8.5E-23 T 23-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 BUMPUSDA_RS01660 363dfb420f1ce54aaaed378971908357 88 PANTHER PTHR33404 1 88 5.5E-25 T 23-04-2016 BUMPUSDA_RS01660 363dfb420f1ce54aaaed378971908357 88 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 88 17.788 T 23-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 BUMPUSDA_RS00835 43f72bf524bb90bfe2c24ed64700b3d0 490 PANTHER PTHR22773 1 483 1.1E-113 T 23-04-2016 BUMPUSDA_RS00835 43f72bf524bb90bfe2c24ed64700b3d0 490 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 479 15.777 T 23-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 BUMPUSDA_RS00835 43f72bf524bb90bfe2c24ed64700b3d0 490 PANTHER PTHR22773:SF41 1 483 1.1E-113 T 23-04-2016 BUMPUSDA_RS00835 43f72bf524bb90bfe2c24ed64700b3d0 490 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 9 479 1.0E-103 T 23-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 BUMPUSDA_RS00835 43f72bf524bb90bfe2c24ed64700b3d0 490 Pfam PF00361 Proton-conducting membrane transporter 122 422 3.6E-60 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 BUMPUSDA_RS00775 1c41f6c191d037fc5de0356bdc47b51e 125 PANTHER PTHR11058:SF5 1 123 2.3E-45 T 23-04-2016 BUMPUSDA_RS00775 1c41f6c191d037fc5de0356bdc47b51e 125 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 26 123 2.5E-27 T 23-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 BUMPUSDA_RS00775 1c41f6c191d037fc5de0356bdc47b51e 125 PANTHER PTHR11058 1 123 2.3E-45 T 23-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 BUMPUSDA_RS00775 1c41f6c191d037fc5de0356bdc47b51e 125 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 7 124 17.57 T 23-04-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 BUMPUSDA_RS00880 e2e08d7aed6002c63475e25536809076 268 PANTHER PTHR23090 1 267 3.8E-121 T 23-04-2016 BUMPUSDA_RS00880 e2e08d7aed6002c63475e25536809076 268 Gene3D G3DSA:3.40.50.620 4 266 4.4E-62 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BUMPUSDA_RS00880 e2e08d7aed6002c63475e25536809076 268 TIGRFAM TIGR00552 nadE: NAD+ synthetase 22 266 1.1E-68 T 23-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 BUMPUSDA_RS00880 e2e08d7aed6002c63475e25536809076 268 PANTHER PTHR23090:SF7 1 267 3.8E-121 T 23-04-2016 BUMPUSDA_RS00880 e2e08d7aed6002c63475e25536809076 268 SUPERFAMILY SSF52402 3 267 1.2E-74 T 23-04-2016 BUMPUSDA_RS00880 e2e08d7aed6002c63475e25536809076 268 Pfam PF02540 NAD synthase 23 265 5.4E-65 T 23-04-2016 IPR022310 NAD/GMP synthase BUMPUSDA_RS00880 e2e08d7aed6002c63475e25536809076 268 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 17 268 29.1 T 23-04-2016 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 BUMPUSDA_RS02015 8eccb181a13997063ff882ecfd379153 484 PIRSF PIRSF004919 14 483 3.5E-137 T 23-04-2016 IPR025502 TldD KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- BUMPUSDA_RS02015 8eccb181a13997063ff882ecfd379153 484 PANTHER PTHR30624:SF4 9 484 1.8E-222 T 23-04-2016 BUMPUSDA_RS02015 8eccb181a13997063ff882ecfd379153 484 PANTHER PTHR30624 9 484 1.8E-222 T 23-04-2016 BUMPUSDA_RS02015 8eccb181a13997063ff882ecfd379153 484 Pfam PF01523 Putative modulator of DNA gyrase 35 334 1.0E-60 T 23-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- BUMPUSDA_RS02015 8eccb181a13997063ff882ecfd379153 484 SUPERFAMILY SSF111283 24 482 2.75E-124 T 23-04-2016 BUMPUSDA_RS00590 03c001d37d8611dde2ddf3561a82b5cb 235 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 199 7.2E-57 T 23-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 BUMPUSDA_RS00590 03c001d37d8611dde2ddf3561a82b5cb 235 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 3 209 25.675 T 23-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 BUMPUSDA_RS00590 03c001d37d8611dde2ddf3561a82b5cb 235 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 6 207 1.6E-82 T 23-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 BUMPUSDA_RS00590 03c001d37d8611dde2ddf3561a82b5cb 235 PIRSF PIRSF006102 1 217 6.7E-75 T 23-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 BUMPUSDA_RS00590 03c001d37d8611dde2ddf3561a82b5cb 235 PANTHER PTHR30586 1 219 5.0E-95 T 23-04-2016 BUMPUSDA_RS00590 03c001d37d8611dde2ddf3561a82b5cb 235 PANTHER PTHR30586:SF0 1 219 5.0E-95 T 23-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 BUMPUSDA_RS02515 1077682cb32785bcec23f614193239ef 277 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 6 274 28.625 T 23-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 BUMPUSDA_RS02515 1077682cb32785bcec23f614193239ef 277 SUPERFAMILY SSF51735 107 273 6.4E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain BUMPUSDA_RS02515 1077682cb32785bcec23f614193239ef 277 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 11 93 1.7E-19 T 23-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 BUMPUSDA_RS02515 1077682cb32785bcec23f614193239ef 277 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 124 195 2.1E-9 T 23-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase BUMPUSDA_RS02515 1077682cb32785bcec23f614193239ef 277 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 9 274 3.0E-78 T 23-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 BUMPUSDA_RS02515 1077682cb32785bcec23f614193239ef 277 PANTHER PTHR21089 9 277 1.9E-102 T 23-04-2016 BUMPUSDA_RS02515 1077682cb32785bcec23f614193239ef 277 PANTHER PTHR21089:SF2 9 277 1.9E-102 T 23-04-2016 BUMPUSDA_RS02515 1077682cb32785bcec23f614193239ef 277 Gene3D G3DSA:3.40.192.10 3 112 1.9E-30 T 23-04-2016 BUMPUSDA_RS02515 1077682cb32785bcec23f614193239ef 277 SUPERFAMILY SSF53223 2 106 1.21E-27 T 23-04-2016 BUMPUSDA_RS02515 1077682cb32785bcec23f614193239ef 277 Gene3D G3DSA:3.40.50.720 113 249 8.9E-39 T 23-04-2016 IPR016040 NAD(P)-binding domain BUMPUSDA_RS02455 30714152840f149844218e1830c66fbe 208 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 72 201 3.6E-17 T 23-04-2016 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BUMPUSDA_RS00445 0cbe2cad59ab971636f52a1e6a102e49 179 Gene3D G3DSA:3.90.80.10 4 175 3.8E-56 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 BUMPUSDA_RS00445 0cbe2cad59ab971636f52a1e6a102e49 179 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 BUMPUSDA_RS00445 0cbe2cad59ab971636f52a1e6a102e49 179 PANTHER PTHR10286 9 175 6.9E-63 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 BUMPUSDA_RS00445 0cbe2cad59ab971636f52a1e6a102e49 179 Pfam PF00719 Inorganic pyrophosphatase 18 173 4.9E-51 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 BUMPUSDA_RS00445 0cbe2cad59ab971636f52a1e6a102e49 179 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 33.293 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 BUMPUSDA_RS00445 0cbe2cad59ab971636f52a1e6a102e49 179 SUPERFAMILY SSF50324 4 175 1.7E-61 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 BUMPUSDA_RS01390 79ad8a0c24057eaf0d9db567426979cf 177 Pfam PF04279 Intracellular septation protein A 1 171 2.3E-52 T 23-04-2016 IPR006008 Intracellular septation protein A GO:0016021 BUMPUSDA_RS01390 79ad8a0c24057eaf0d9db567426979cf 177 PANTHER PTHR36917 1 171 9.3E-50 T 23-04-2016 BUMPUSDA_RS01390 79ad8a0c24057eaf0d9db567426979cf 177 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 176 16.122 T 23-04-2016 IPR006008 Intracellular septation protein A GO:0016021 BUMPUSDA_RS01390 79ad8a0c24057eaf0d9db567426979cf 177 PANTHER PTHR36917:SF1 1 171 9.3E-50 T 23-04-2016 BUMPUSDA_RS01390 79ad8a0c24057eaf0d9db567426979cf 177 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 176 1.5E-57 T 23-04-2016 IPR006008 Intracellular septation protein A GO:0016021 BUMPUSDA_RS01180 25447895bbfd83b0a3516493f38b8151 173 Gene3D G3DSA:1.10.132.20 55 172 2.1E-36 T 23-04-2016 IPR023584 Ribosome recycling factor domain BUMPUSDA_RS01180 25447895bbfd83b0a3516493f38b8151 173 Hamap MF_00040 Ribosome-recycling factor [frr]. 1 173 21.59 T 23-04-2016 IPR002661 Ribosome recycling factor GO:0006412 BUMPUSDA_RS01180 25447895bbfd83b0a3516493f38b8151 173 Pfam PF01765 Ribosome recycling factor 8 171 6.1E-50 T 23-04-2016 IPR023584 Ribosome recycling factor domain BUMPUSDA_RS01180 25447895bbfd83b0a3516493f38b8151 173 PANTHER PTHR20982 1 173 8.7E-57 T 23-04-2016 IPR002661 Ribosome recycling factor GO:0006412 BUMPUSDA_RS01180 25447895bbfd83b0a3516493f38b8151 173 TIGRFAM TIGR00496 frr: ribosome recycling factor 1 173 2.8E-57 T 23-04-2016 IPR002661 Ribosome recycling factor GO:0006412 BUMPUSDA_RS01180 25447895bbfd83b0a3516493f38b8151 173 SUPERFAMILY SSF55194 1 172 3.4E-55 T 23-04-2016 IPR023584 Ribosome recycling factor domain BUMPUSDA_RS01745 00876dd93b1f48d1ef4f42c36fcfec4a 238 PRINTS PR01008 Flagellar L-ring protein signature 75 87 5.1E-30 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BUMPUSDA_RS01745 00876dd93b1f48d1ef4f42c36fcfec4a 238 PRINTS PR01008 Flagellar L-ring protein signature 178 194 5.1E-30 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BUMPUSDA_RS01745 00876dd93b1f48d1ef4f42c36fcfec4a 238 PRINTS PR01008 Flagellar L-ring protein signature 199 213 5.1E-30 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BUMPUSDA_RS01745 00876dd93b1f48d1ef4f42c36fcfec4a 238 PRINTS PR01008 Flagellar L-ring protein signature 215 229 5.1E-30 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BUMPUSDA_RS01745 00876dd93b1f48d1ef4f42c36fcfec4a 238 PRINTS PR01008 Flagellar L-ring protein signature 152 167 5.1E-30 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BUMPUSDA_RS01745 00876dd93b1f48d1ef4f42c36fcfec4a 238 Pfam PF02107 Flagellar L-ring protein 50 237 2.6E-55 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BUMPUSDA_RS01745 00876dd93b1f48d1ef4f42c36fcfec4a 238 PANTHER PTHR34933 16 238 3.6E-54 T 23-04-2016 BUMPUSDA_RS01745 00876dd93b1f48d1ef4f42c36fcfec4a 238 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 236 26.204 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 BUMPUSDA_RS01745 00876dd93b1f48d1ef4f42c36fcfec4a 238 PANTHER PTHR34933:SF1 16 238 3.6E-54 T 23-04-2016 BUMPUSDA_RS00815 45e6c9bb4b85730d474541a1c95fa681 167 PANTHER PTHR33269:SF2 1 164 5.7E-58 T 23-04-2016 BUMPUSDA_RS00815 45e6c9bb4b85730d474541a1c95fa681 167 PANTHER PTHR33269 1 164 5.7E-58 T 23-04-2016 BUMPUSDA_RS00815 45e6c9bb4b85730d474541a1c95fa681 167 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 16 158 8.9E-29 T 23-04-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 BUMPUSDA_RS01480 ed519fe659407ab9d9b69540f2a258ae 334 Pfam PF10282 Lactonase, 7-bladed beta-propeller 9 329 2.3E-56 T 23-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 BUMPUSDA_RS01480 ed519fe659407ab9d9b69540f2a258ae 334 SUPERFAMILY SSF50974 4 294 8.63E-33 T 23-04-2016 IPR011045 Nitrous oxide reductase, N-terminal BUMPUSDA_RS01480 ed519fe659407ab9d9b69540f2a258ae 334 PANTHER PTHR30344:SF1 6 334 7.9E-52 T 23-04-2016 BUMPUSDA_RS01480 ed519fe659407ab9d9b69540f2a258ae 334 Gene3D G3DSA:2.130.10.10 2 329 1.5E-51 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 BUMPUSDA_RS01480 ed519fe659407ab9d9b69540f2a258ae 334 PANTHER PTHR30344 6 334 7.9E-52 T 23-04-2016 BUMPUSDA_RS00615 2685600d7afd81a56dc60afde079c1b5 360 Pfam PF01594 Domain of unknown function DUF20 15 343 2.6E-44 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like BUMPUSDA_RS00615 2685600d7afd81a56dc60afde079c1b5 360 PANTHER PTHR21716 2 345 5.7E-118 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like BUMPUSDA_RS00615 2685600d7afd81a56dc60afde079c1b5 360 PANTHER PTHR21716:SF20 2 345 5.7E-118 T 23-04-2016 BUMPUSDA_RS02330 350dece3c433ddf1bc6ceb998248a95f 356 Pfam PF03562 MltA specific insert domain 89 258 1.1E-35 T 23-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 BUMPUSDA_RS02330 350dece3c433ddf1bc6ceb998248a95f 356 SMART SM00925 123 258 1.1E-55 T 23-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 BUMPUSDA_RS02330 350dece3c433ddf1bc6ceb998248a95f 356 PANTHER PTHR30124 1 355 2.8E-99 T 23-04-2016 BUMPUSDA_RS02330 350dece3c433ddf1bc6ceb998248a95f 356 Pfam PF06725 3D domain 278 355 8.5E-24 T 23-04-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 BUMPUSDA_RS02330 350dece3c433ddf1bc6ceb998248a95f 356 SUPERFAMILY SSF50685 30 354 1.6E-95 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain BUMPUSDA_RS02330 350dece3c433ddf1bc6ceb998248a95f 356 Gene3D G3DSA:2.40.40.10 76 160 1.2E-11 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain BUMPUSDA_RS02330 350dece3c433ddf1bc6ceb998248a95f 356 Gene3D G3DSA:2.40.40.10 167 354 2.3E-41 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain BUMPUSDA_RS02330 350dece3c433ddf1bc6ceb998248a95f 356 PANTHER PTHR30124:SF0 1 355 2.8E-99 T 23-04-2016 BUMPUSDA_RS02380 50a8b14292fa4f06616cf4f27976b548 284 PANTHER PTHR11048 1 283 2.7E-83 T 23-04-2016 BUMPUSDA_RS02380 50a8b14292fa4f06616cf4f27976b548 284 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 4 281 5.9E-88 T 23-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 BUMPUSDA_RS02380 50a8b14292fa4f06616cf4f27976b548 284 PANTHER PTHR11048:SF20 1 283 2.7E-83 T 23-04-2016 BUMPUSDA_RS02380 50a8b14292fa4f06616cf4f27976b548 284 Pfam PF01040 UbiA prenyltransferase family 23 264 2.6E-49 T 23-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 BUMPUSDA_RS02380 50a8b14292fa4f06616cf4f27976b548 284 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 57 79 - T 23-04-2016 IPR030470 UbiA prenyltransferase conserved site BUMPUSDA_RS02380 50a8b14292fa4f06616cf4f27976b548 284 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 1 283 16.365 T 23-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 BUMPUSDA_RS00940 695a7e8a246d52fcfde245288616f6b7 101 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 1 101 18.495 T 23-04-2016 IPR026592 Outer membrane protein assembly factor BamE BUMPUSDA_RS00940 695a7e8a246d52fcfde245288616f6b7 101 Pfam PF04355 SmpA / OmlA family 34 96 1.2E-10 T 23-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 BUMPUSDA_RS01755 bc43ca5a40c290cc3ed1fe079c09fc49 103 PRINTS PR01002 Flagellar protein FlgJ signature 53 73 4.7E-7 T 23-04-2016 BUMPUSDA_RS01755 bc43ca5a40c290cc3ed1fe079c09fc49 103 PRINTS PR01002 Flagellar protein FlgJ signature 28 51 4.7E-7 T 23-04-2016 BUMPUSDA_RS01755 bc43ca5a40c290cc3ed1fe079c09fc49 103 Pfam PF10135 Rod binding protein 50 96 3.6E-12 T 23-04-2016 IPR019301 Flagellar protein FlgJ, N-terminal BUMPUSDA_RS01575 3e174207141e5022af1c95ed25316df5 75 Gene3D G3DSA:3.40.50.300 6 70 2.6E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS01575 3e174207141e5022af1c95ed25316df5 75 Pfam PF02224 Cytidylate kinase 8 74 2.8E-17 T 23-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 BUMPUSDA_RS01575 3e174207141e5022af1c95ed25316df5 75 SUPERFAMILY SSF52540 6 72 5.96E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase BUMPUSDA_RS00450 41c94851cdd4ef3f3f63fd10c0d0acf6 446 Pfam PF01523 Putative modulator of DNA gyrase 33 323 3.5E-46 T 23-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- BUMPUSDA_RS00450 41c94851cdd4ef3f3f63fd10c0d0acf6 446 SUPERFAMILY SSF111283 15 446 5.1E-115 T 23-04-2016 BUMPUSDA_RS00450 41c94851cdd4ef3f3f63fd10c0d0acf6 446 PANTHER PTHR30624 6 446 4.7E-135 T 23-04-2016 BUMPUSDA_RS00450 41c94851cdd4ef3f3f63fd10c0d0acf6 446 PANTHER PTHR30624:SF1 6 446 4.7E-135 T 23-04-2016 BUMPUSDA_RS00440 9830b6d330395c0b8d98136c0380dbbc 968 PANTHER PTHR36985 1 963 1.1E-20 T 23-04-2016 BUMPUSDA_RS01820 8fdd2fbbb6188aa5161620aef778938a 128 Pfam PF13036 Peptidoglycan-synthase activator LpoB 18 121 2.4E-8 T 23-04-2016 IPR014094 Penicillin-binding protein activator LpoB BUMPUSDA_RS00850 0868147ad5a9d30cf46f27d56bbe0873 72 Pfam PF02674 Colicin V production protein 4 72 3.6E-7 T 23-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020