locus-tag class description JOS54_RS00005 IPR010921 Trp repressor/replication initiator JOS54_RS00005 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS00005 IPR038454 DnaA, N-terminal domain superfamily JOS54_RS00005 IPR013317 Chromosomal replication initiator protein DnaA JOS54_RS00005 IPR018312 Chromosomal replication control, initiator DnaA, conserved site JOS54_RS00005 IPR020591 Chromosomal replication control, initiator DnaA-like JOS54_RS00005 IPR001957 Chromosomal replication control, initiator DnaA JOS54_RS00005 IPR003593 AAA+ ATPase domain JOS54_RS00005 IPR013159 Chromosomal replication initiator, DnaA C-terminal JOS54_RS00010 IPR001001 DNA polymerase III, beta sliding clamp JOS54_RS00010 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal JOS54_RS00010 IPR022637 DNA polymerase III, beta sliding clamp, central JOS54_RS00010 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal JOS54_RS00020 IPR003395 RecF/RecN/SMC, N-terminal JOS54_RS00020 IPR001238 DNA-binding, RecF JOS54_RS00020 IPR018078 DNA-binding, RecF, conserved site JOS54_RS00020 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS00020 IPR042174 DNA-binding RecF, domain 2 JOS54_RS00025 IPR013760 DNA topoisomerase, type IIA-like domain superfamily JOS54_RS00025 IPR001241 DNA topoisomerase, type IIA JOS54_RS00025 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JOS54_RS00025 IPR034160 DNA gyrase subunit B, TOPRIM domain JOS54_RS00025 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JOS54_RS00025 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal JOS54_RS00025 IPR020568 Ribosomal protein S5 domain 2-type fold JOS54_RS00025 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 JOS54_RS00025 IPR011557 DNA gyrase, subunit B JOS54_RS00025 IPR006171 TOPRIM domain JOS54_RS00025 IPR002288 DNA gyrase B subunit, C-terminal JOS54_RS00025 IPR003594 Histidine kinase/HSP90-like ATPase JOS54_RS00025 IPR018522 DNA topoisomerase, type IIA, conserved site JOS54_RS00030 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal JOS54_RS00030 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily JOS54_RS00030 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta JOS54_RS00030 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal JOS54_RS00030 IPR013760 DNA topoisomerase, type IIA-like domain superfamily JOS54_RS00030 IPR005743 DNA gyrase, subunit A JOS54_RS00030 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat JOS54_RS00035 IPR002068 Alpha crystallin/Hsp20 domain JOS54_RS00035 IPR031107 Small heat shock protein HSP20 JOS54_RS00035 IPR008978 HSP20-like chaperone JOS54_RS00040 IPR033729 Serine-tRNA ligase catalytic core domain JOS54_RS00040 IPR015866 Serine-tRNA synthetase, type1, N-terminal JOS54_RS00040 IPR002317 Serine-tRNA ligase, type1 JOS54_RS00040 IPR006195 Aminoacyl-tRNA synthetase, class II JOS54_RS00040 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) JOS54_RS00040 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily JOS54_RS00040 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm JOS54_RS00050 IPR028883 tRNA-specific adenosine deaminase JOS54_RS00050 IPR016193 Cytidine deaminase-like JOS54_RS00050 IPR002125 Cytidine and deoxycytidylate deaminase domain JOS54_RS00050 IPR016192 APOBEC/CMP deaminase, zinc-binding JOS54_RS00055 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS00055 IPR012763 DNA polymerase III, subunit gamma/ tau JOS54_RS00055 IPR022754 DNA polymerase III, gamma subunit, domain III JOS54_RS00055 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal JOS54_RS00055 IPR001270 ClpA/B family JOS54_RS00055 IPR003593 AAA+ ATPase domain JOS54_RS00060 IPR015967 Recombination protein RecR, conserved site JOS54_RS00060 IPR023628 Recombination protein RecR, C4-type zinc finger JOS54_RS00060 IPR000093 DNA recombination protein RecR JOS54_RS00060 IPR006171 TOPRIM domain JOS54_RS00060 IPR034137 RecR, TOPRIM domain JOS54_RS00060 IPR023627 Recombination protein RecR JOS54_RS00065 IPR000559 Formate-tetrahydrofolate ligase, FTHFS JOS54_RS00065 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site JOS54_RS00065 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS00075 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related JOS54_RS00075 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG JOS54_RS00075 IPR026904 GidA associated domain 3 JOS54_RS00075 IPR036188 FAD/NAD(P)-binding domain superfamily JOS54_RS00075 IPR020595 MnmG-related, conserved site JOS54_RS00085 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JOS54_RS00085 IPR003682 rRNA small subunit methyltransferase G JOS54_RS00090 IPR036086 ParB/Sulfiredoxin superfamily JOS54_RS00090 IPR023705 Nucleoid occlusion protein JOS54_RS00090 IPR004437 ParB/RepB/Spo0J partition protein JOS54_RS00090 IPR041468 ParB/Spo0J, HTH domain JOS54_RS00090 IPR003115 ParB/Sulfiredoxin JOS54_RS00095 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS00095 IPR025669 AAA domain JOS54_RS00100 IPR041468 ParB/Spo0J, HTH domain JOS54_RS00100 IPR036086 ParB/Sulfiredoxin superfamily JOS54_RS00100 IPR003115 ParB/Sulfiredoxin JOS54_RS00100 IPR004437 ParB/RepB/Spo0J partition protein JOS54_RS00110 IPR000568 ATP synthase, F0 complex, subunit A JOS54_RS00110 IPR023011 ATP synthase, F0 complex, subunit A, active site JOS54_RS00110 IPR035908 ATP synthase, F0 complex, subunit A superfamily JOS54_RS00115 IPR000454 ATP synthase, F0 complex, subunit C JOS54_RS00115 IPR002379 V-ATPase proteolipid subunit C-like domain JOS54_RS00115 IPR035921 F/V-ATP synthase subunit C superfamily JOS54_RS00115 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast JOS54_RS00115 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site JOS54_RS00120 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast JOS54_RS00125 IPR020781 ATPase, OSCP/delta subunit, conserved site JOS54_RS00125 IPR000711 ATPase, OSCP/delta subunit JOS54_RS00125 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily JOS54_RS00130 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain JOS54_RS00130 IPR005294 ATP synthase, F1 complex, alpha subunit JOS54_RS00130 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain JOS54_RS00130 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily JOS54_RS00130 IPR000793 ATP synthase, alpha subunit, C-terminal JOS54_RS00130 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily JOS54_RS00130 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily JOS54_RS00130 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain JOS54_RS00130 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site JOS54_RS00130 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS00135 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily JOS54_RS00135 IPR000131 ATP synthase, F1 complex, gamma subunit JOS54_RS00135 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site JOS54_RS00140 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal JOS54_RS00140 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS00140 IPR003593 AAA+ ATPase domain JOS54_RS00140 IPR005722 ATP synthase, F1 complex, beta subunit JOS54_RS00140 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site JOS54_RS00140 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain JOS54_RS00140 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily JOS54_RS00140 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain JOS54_RS00145 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit JOS54_RS00145 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain JOS54_RS00145 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal JOS54_RS00145 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal JOS54_RS00145 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily JOS54_RS00155 IPR031168 TrmE-type guanine nucleotide-binding domain JOS54_RS00155 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS00155 IPR018948 GTP-binding protein TrmE, N-terminal JOS54_RS00155 IPR004520 tRNA modification GTPase MnmE JOS54_RS00155 IPR027368 tRNA modification GTPase MnmE domain 2 JOS54_RS00155 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 JOS54_RS00155 IPR025867 MnmE, helical domain JOS54_RS00155 IPR006073 GTP binding domain JOS54_RS00155 IPR005225 Small GTP-binding protein domain JOS54_RS00160 IPR015991 Uncharacterised hydrolase TatD-type JOS54_RS00160 IPR018228 Deoxyribonuclease, TatD-related, conserved site JOS54_RS00160 IPR001130 TatD family JOS54_RS00160 IPR032466 Metal-dependent hydrolase JOS54_RS00165 IPR014362 Glutamate dehydrogenase JOS54_RS00165 IPR036291 NAD(P)-binding domain superfamily JOS54_RS00165 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain JOS54_RS00165 IPR033922 NAD(P) binding domain of glutamate dehydrogenase JOS54_RS00165 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal JOS54_RS00165 IPR033524 Leu/Phe/Val dehydrogenases active site JOS54_RS00165 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase JOS54_RS00170 IPR006171 TOPRIM domain JOS54_RS00170 IPR034141 Ribonuclease M5-like, TOPRIM domain JOS54_RS00170 IPR004466 Ribonuclease M5 JOS54_RS00170 IPR025156 Ribonuclease M5, C-terminal domain JOS54_RS00175 IPR023165 rRNA adenine dimethylase-like JOS54_RS00175 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal JOS54_RS00175 IPR011530 Ribosomal RNA adenine dimethylase JOS54_RS00175 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JOS54_RS00175 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm JOS54_RS00175 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site JOS54_RS00180 IPR013750 GHMP kinase, C-terminal domain JOS54_RS00180 IPR036554 GHMP kinase, C-terminal domain superfamily JOS54_RS00180 IPR006204 GHMP kinase N-terminal domain JOS54_RS00180 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase JOS54_RS00180 IPR020568 Ribosomal protein S5 domain 2-type fold JOS54_RS00180 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JOS54_RS00185 IPR029044 Nucleotide-diphospho-sugar transferases JOS54_RS00185 IPR011004 Trimeric LpxA-like superfamily JOS54_RS00185 IPR038009 GlmU, C-terminal LbH domain JOS54_RS00185 IPR001451 Hexapeptide repeat JOS54_RS00185 IPR005835 Nucleotidyl transferase domain JOS54_RS00185 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase JOS54_RS00185 IPR018357 Hexapeptide transferase, conserved site JOS54_RS00190 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type JOS54_RS00190 IPR005946 Ribose-phosphate pyrophosphokinase JOS54_RS00190 IPR029057 Phosphoribosyltransferase-like JOS54_RS00190 IPR000836 Phosphoribosyltransferase domain JOS54_RS00190 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain JOS54_RS00190 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site JOS54_RS00195 IPR011129 Cold shock domain JOS54_RS00195 IPR019844 Cold-shock (CSD) domain JOS54_RS00195 IPR002059 Cold-shock protein, DNA-binding JOS54_RS00195 IPR012340 Nucleic acid-binding, OB-fold JOS54_RS00195 IPR012156 Cold shock, CspA JOS54_RS00200 IPR015413 Methionyl/Leucyl tRNA synthetase JOS54_RS00200 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding JOS54_RS00200 IPR002547 tRNA-binding domain JOS54_RS00200 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JOS54_RS00200 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JOS54_RS00200 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain JOS54_RS00200 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal JOS54_RS00200 IPR012340 Nucleic acid-binding, OB-fold JOS54_RS00200 IPR014758 Methionyl-tRNA synthetase JOS54_RS00200 IPR023457 Methionine-tRNA synthetase, type 2 JOS54_RS00200 IPR033911 Methioninyl-tRNA synthetase core domain JOS54_RS00205 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal JOS54_RS00205 IPR002504 NAD kinase JOS54_RS00205 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal JOS54_RS00205 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily JOS54_RS00210 IPR036878 Glucose permease domain IIB JOS54_RS00210 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site JOS54_RS00210 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 JOS54_RS00210 IPR003352 Phosphotransferase system, EIIC JOS54_RS00210 IPR013013 Phosphotransferase system, EIIC component, type 1 JOS54_RS00210 IPR001996 Phosphotransferase system, IIB component, type 1 JOS54_RS00210 IPR011055 Duplicated hybrid motif JOS54_RS00210 IPR011299 PTS system glucose-specific IIBC component JOS54_RS00215 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS00215 IPR036678 MutS, connector domain superfamily JOS54_RS00215 IPR007860 DNA mismatch repair protein MutS, connector domain JOS54_RS00215 IPR036187 DNA mismatch repair protein MutS, core domain superfamily JOS54_RS00215 IPR016151 DNA mismatch repair protein MutS, N-terminal JOS54_RS00215 IPR007696 DNA mismatch repair protein MutS, core JOS54_RS00215 IPR007861 DNA mismatch repair protein MutS, clamp JOS54_RS00215 IPR000432 DNA mismatch repair protein MutS, C-terminal JOS54_RS00215 IPR017261 DNA mismatch repair protein MutS/MSH JOS54_RS00215 IPR007695 DNA mismatch repair protein MutS-like, N-terminal JOS54_RS00215 IPR005748 DNA mismatch repair protein MutS JOS54_RS00220 IPR041102 UvrA, interaction domain JOS54_RS00220 IPR041552 UvrA DNA-binding domain JOS54_RS00220 IPR004602 UvrABC system subunit A JOS54_RS00220 IPR003593 AAA+ ATPase domain JOS54_RS00220 IPR003439 ABC transporter-like JOS54_RS00220 IPR017871 ABC transporter, conserved site JOS54_RS00220 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS00225 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal JOS54_RS00225 IPR011104 HPr kinase/phosphorylase, C-terminal JOS54_RS00225 IPR003755 HPr(Ser) kinase/phosphorylase JOS54_RS00225 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily JOS54_RS00230 IPR023214 HAD superfamily JOS54_RS00230 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic JOS54_RS00230 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JOS54_RS00230 IPR041492 Haloacid dehalogenase-like hydrolase JOS54_RS00230 IPR037512 Phosphoglycolate phosphatase, prokaryotic JOS54_RS00230 IPR036412 HAD-like superfamily JOS54_RS00230 IPR006439 HAD hydrolase, subfamily IA JOS54_RS00235 IPR005337 RapZ-like family JOS54_RS00235 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS00240 IPR038136 Gluconeogenesis factor superfamily JOS54_RS00240 IPR010119 Gluconeogenesis factor JOS54_RS00240 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 JOS54_RS00245 IPR027434 Homing endonuclease JOS54_RS00245 IPR039518 WhiA, LAGLIDADG-like domain JOS54_RS00245 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain JOS54_RS00245 IPR003802 Sporulation regulator WhiA JOS54_RS00245 IPR023054 Sporulation regulator WhiA, C-terminal JOS54_RS00245 IPR036388 Winged helix-like DNA-binding domain superfamily JOS54_RS00250 IPR016732 Uncharacterised conserved protein UCP018688 JOS54_RS00250 IPR016181 Acyl-CoA N-acyltransferase JOS54_RS00260 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site JOS54_RS00260 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family JOS54_RS00260 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain JOS54_RS00260 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain JOS54_RS00260 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I JOS54_RS00260 IPR036291 NAD(P)-binding domain superfamily JOS54_RS00275 IPR032678 tRNA synthetases class I, catalytic domain JOS54_RS00275 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JOS54_RS00275 IPR015803 Cysteine-tRNA ligase JOS54_RS00275 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding JOS54_RS00275 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR JOS54_RS00275 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase JOS54_RS00280 IPR008226 Mini-ribonuclease 3 family JOS54_RS00280 IPR036389 Ribonuclease III, endonuclease domain superfamily JOS54_RS00280 IPR000999 Ribonuclease III domain JOS54_RS00285 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JOS54_RS00285 IPR001537 tRNA/rRNA methyltransferase, SpoU type JOS54_RS00285 IPR004441 RNA methyltransferase TrmH family JOS54_RS00285 IPR029064 50S ribosomal protein L30e-like JOS54_RS00285 IPR029028 Alpha/beta knot methyltransferases JOS54_RS00285 IPR013123 RNA 2-O ribose methyltransferase, substrate binding JOS54_RS00295 IPR011332 Zinc-binding ribosomal protein JOS54_RS00295 IPR001705 Ribosomal protein L33 JOS54_RS00295 IPR038584 Ribosomal protein L33 superfamily JOS54_RS00305 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site JOS54_RS00305 IPR006645 NusG, N-terminal JOS54_RS00305 IPR014722 Ribosomal protein L2, domain 2 JOS54_RS00305 IPR005824 KOW JOS54_RS00305 IPR036735 NusG, N-terminal domain superfamily JOS54_RS00305 IPR008991 Translation protein SH3-like domain superfamily JOS54_RS00305 IPR001062 Transcription antitermination protein, NusG JOS54_RS00325 IPR020783 Ribosomal protein L11, C-terminal JOS54_RS00325 IPR020785 Ribosomal protein L11, conserved site JOS54_RS00325 IPR000911 Ribosomal protein L11/L12 JOS54_RS00325 IPR006519 Ribosomal protein L11, bacterial-type JOS54_RS00325 IPR036769 Ribosomal protein L11, C-terminal domain superfamily JOS54_RS00325 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily JOS54_RS00325 IPR020784 Ribosomal protein L11, N-terminal JOS54_RS00330 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein JOS54_RS00330 IPR023674 Ribosomal protein L1-like JOS54_RS00330 IPR002143 Ribosomal protein L1 JOS54_RS00330 IPR005878 Ribosomal protein L1, bacterial-type JOS54_RS00330 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich JOS54_RS00330 IPR023673 Ribosomal protein L1, conserved site JOS54_RS00340 IPR002363 Ribosomal protein L10, eubacterial, conserved site JOS54_RS00340 IPR001790 Ribosomal protein L10P JOS54_RS00340 IPR022973 Ribosomal protein L10 JOS54_RS00345 IPR008932 Ribosomal protein L7/L12, oligomerisation JOS54_RS00345 IPR000206 Ribosomal protein L7/L12 JOS54_RS00345 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like JOS54_RS00345 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily JOS54_RS00345 IPR013823 Ribosomal protein L7/L12, C-terminal JOS54_RS00350 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JOS54_RS00350 IPR007848 Methyltransferase small domain JOS54_RS00370 IPR017871 ABC transporter, conserved site JOS54_RS00370 IPR003439 ABC transporter-like JOS54_RS00370 IPR003593 AAA+ ATPase domain JOS54_RS00370 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS00375 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain JOS54_RS00375 IPR015712 DNA-directed RNA polymerase, subunit 2 JOS54_RS00375 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain JOS54_RS00375 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily JOS54_RS00375 IPR014724 RNA polymerase Rpb2, OB-fold JOS54_RS00375 IPR007641 RNA polymerase Rpb2, domain 7 JOS54_RS00375 IPR037034 RNA polymerase Rpb2, domain 2 superfamily JOS54_RS00375 IPR007642 RNA polymerase Rpb2, domain 2 JOS54_RS00375 IPR007644 RNA polymerase, beta subunit, protrusion JOS54_RS00375 IPR007121 RNA polymerase, beta subunit, conserved site JOS54_RS00375 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type JOS54_RS00375 IPR007645 RNA polymerase Rpb2, domain 3 JOS54_RS00380 IPR000722 RNA polymerase, alpha subunit JOS54_RS00380 IPR007066 RNA polymerase Rpb1, domain 3 JOS54_RS00380 IPR007081 RNA polymerase Rpb1, domain 5 JOS54_RS00380 IPR007083 RNA polymerase Rpb1, domain 4 JOS54_RS00380 IPR042102 RNA polymerase Rpb1, domain 3 superfamily JOS54_RS00380 IPR007080 RNA polymerase Rpb1, domain 1 JOS54_RS00380 IPR006592 RNA polymerase, N-terminal JOS54_RS00380 IPR012754 DNA-directed RNA polymerase, subunit beta-prime JOS54_RS00380 IPR038120 RNA polymerase Rpb1, funnel domain superfamily JOS54_RS00405 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE JOS54_RS00405 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS00410 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB JOS54_RS00410 IPR000905 Gcp-like domain JOS54_RS00415 IPR006464 N-acetyltransferase RimI/Ard1 JOS54_RS00415 IPR000182 GNAT domain JOS54_RS00415 IPR016181 Acyl-CoA N-acyltransferase JOS54_RS00420 IPR017861 Kae1/TsaD family JOS54_RS00420 IPR017860 Peptidase M22, conserved site JOS54_RS00420 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD JOS54_RS00420 IPR000905 Gcp-like domain JOS54_RS00425 IPR036291 NAD(P)-binding domain superfamily JOS54_RS00425 IPR036388 Winged helix-like DNA-binding domain superfamily JOS54_RS00425 IPR022876 Redox-sensing transcriptional repressor Rex JOS54_RS00425 IPR003781 CoA-binding JOS54_RS00425 IPR009718 Rex DNA-binding, C-terminal domain JOS54_RS00425 IPR036390 Winged helix DNA-binding domain superfamily JOS54_RS00430 IPR012340 Nucleic acid-binding, OB-fold JOS54_RS00430 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) JOS54_RS00430 IPR006195 Aminoacyl-tRNA synthetase, class II JOS54_RS00430 IPR004522 Asparagine-tRNA ligase JOS54_RS00430 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb JOS54_RS00435 IPR032781 ABC-transporter extension domain JOS54_RS00435 IPR003439 ABC transporter-like JOS54_RS00435 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily JOS54_RS00435 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS00435 IPR017871 ABC transporter, conserved site JOS54_RS00435 IPR003593 AAA+ ATPase domain JOS54_RS00435 IPR032524 ABC transporter Uup, C-terminal JOS54_RS00440 IPR022953 ATP-dependent 6-phosphofructokinase JOS54_RS00440 IPR011183 Pyrophosphate-dependent phosphofructokinase PfpB JOS54_RS00440 IPR035966 Phosphofructokinase superfamily JOS54_RS00440 IPR000023 Phosphofructokinase domain JOS54_RS00450 IPR025758 Fic/DOC N-terminal JOS54_RS00450 IPR003812 Fido domain JOS54_RS00450 IPR040198 Fido domain-containing protein JOS54_RS00450 IPR026287 Protein adenylyltransferase SoFic-like JOS54_RS00450 IPR036597 Fido-like domain superfamily JOS54_RS00505 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site JOS54_RS00505 IPR036878 Glucose permease domain IIB JOS54_RS00505 IPR001996 Phosphotransferase system, IIB component, type 1 JOS54_RS00505 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component JOS54_RS00505 IPR011055 Duplicated hybrid motif JOS54_RS00505 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 JOS54_RS00505 IPR003352 Phosphotransferase system, EIIC JOS54_RS00505 IPR013013 Phosphotransferase system, EIIC component, type 1 JOS54_RS00510 IPR018120 Glycoside hydrolase family 1, active site JOS54_RS00510 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site JOS54_RS00510 IPR017853 Glycoside hydrolase superfamily JOS54_RS00510 IPR001360 Glycoside hydrolase family 1 JOS54_RS00530 IPR031157 Tr-type G domain, conserved site JOS54_RS00530 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS00530 IPR000640 Elongation factor EFG, domain V-like JOS54_RS00530 IPR035649 EFG, domain V JOS54_RS00530 IPR035647 EF-G domain III/V-like JOS54_RS00530 IPR009022 Elongation factor G, domain III JOS54_RS00530 IPR004161 Translation elongation factor EFTu-like, domain 2 JOS54_RS00530 IPR041095 Elongation Factor G, domain II JOS54_RS00530 IPR000795 Transcription factor, GTP-binding domain JOS54_RS00530 IPR020568 Ribosomal protein S5 domain 2-type fold JOS54_RS00530 IPR005517 Translation elongation factor EFG/EF2, domain IV JOS54_RS00530 IPR004540 Translation elongation factor EFG/EF2 JOS54_RS00530 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JOS54_RS00530 IPR009000 Translation protein, beta-barrel domain superfamily JOS54_RS00530 IPR005225 Small GTP-binding protein domain JOS54_RS00540 IPR005115 Uncharacterised domain UPF0126 JOS54_RS00550 IPR019986 DAK2 domain-containing protein YloV JOS54_RS00550 IPR004007 DhaL domain JOS54_RS00550 IPR036117 DhaL domain superfamily JOS54_RS00550 IPR033470 Uncharacterised protein, DhaK domain JOS54_RS00560 IPR006153 Cation/H+ exchanger JOS54_RS00560 IPR004771 K+/H+ exchanger JOS54_RS00560 IPR038770 Sodium/solute symporter superfamily JOS54_RS00580 IPR035985 Ubiquitin-activating enzyme JOS54_RS00580 IPR000594 THIF-type NAD/FAD binding fold JOS54_RS00585 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain JOS54_RS00585 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily JOS54_RS00585 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC JOS54_RS00590 IPR011055 Duplicated hybrid motif JOS54_RS00590 IPR016047 Peptidase M23 JOS54_RS00600 IPR019264 Domain of unknown function DUF2179 JOS54_RS00600 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal JOS54_RS00600 IPR003740 Uncharacterised membrane protein YitT JOS54_RS00605 IPR003439 ABC transporter-like JOS54_RS00605 IPR005286 Cell division protein FtsE, ATP-binding JOS54_RS00605 IPR017871 ABC transporter, conserved site JOS54_RS00605 IPR003593 AAA+ ATPase domain JOS54_RS00605 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS00610 IPR040690 FtsX, extracellular domain JOS54_RS00610 IPR003838 ABC transporter permease protein domain JOS54_RS00610 IPR004513 Cell division protein FtsX JOS54_RS00615 IPR041489 PDZ domain 6 JOS54_RS00615 IPR036034 PDZ superfamily JOS54_RS00615 IPR005151 Tail specific protease JOS54_RS00615 IPR036366 PGBD superfamily JOS54_RS00615 IPR002477 Peptidoglycan binding-like JOS54_RS00615 IPR029045 ClpP/crotonase-like domain superfamily JOS54_RS00615 IPR004447 C-terminal-processing peptidase S41A JOS54_RS00615 IPR001478 PDZ domain JOS54_RS00615 IPR036365 PGBD-like superfamily JOS54_RS00620 IPR004807 UvrABC system, subunit B JOS54_RS00620 IPR036876 UVR domain superfamily JOS54_RS00620 IPR001943 UVR domain JOS54_RS00620 IPR024759 UvrB, YAD/RRR-motif-containing domain JOS54_RS00620 IPR006935 Helicase/UvrB, N-terminal JOS54_RS00620 IPR041471 UvrB, interaction domain JOS54_RS00620 IPR014001 Helicase superfamily 1/2, ATP-binding domain JOS54_RS00620 IPR001650 Helicase, C-terminal JOS54_RS00620 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS00625 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 JOS54_RS00625 IPR000529 Ribosomal protein S6 JOS54_RS00625 IPR020815 Ribosomal protein S6, conserved site JOS54_RS00625 IPR020814 Ribosomal protein S6, plastid/chloroplast JOS54_RS00625 IPR035980 Ribosomal protein S6 superfamily JOS54_RS00630 IPR012340 Nucleic acid-binding, OB-fold JOS54_RS00630 IPR000424 Primosome PriB/single-strand DNA-binding JOS54_RS00630 IPR011344 Single-stranded DNA-binding protein JOS54_RS00635 IPR001648 Ribosomal protein S18 JOS54_RS00635 IPR036870 Ribosomal protein S18 superfamily JOS54_RS00635 IPR018275 Ribosomal protein S18, conserved site JOS54_RS00640 IPR010964 Peptidase M20A, peptidase V-related JOS54_RS00640 IPR036264 Bacterial exopeptidase dimerisation domain JOS54_RS00640 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site JOS54_RS00640 IPR002933 Peptidase M20 JOS54_RS00645 IPR006129 Adhesin B JOS54_RS00645 IPR006128 Adhesion lipoprotein JOS54_RS00645 IPR006127 Periplasmic solute binding protein, ZnuA-like JOS54_RS00650 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS00650 IPR017871 ABC transporter, conserved site JOS54_RS00650 IPR003439 ABC transporter-like JOS54_RS00650 IPR003593 AAA+ ATPase domain JOS54_RS00655 IPR036390 Winged helix DNA-binding domain superfamily JOS54_RS00655 IPR001626 ABC transporter, TroCD-like JOS54_RS00655 IPR036388 Winged helix-like DNA-binding domain superfamily JOS54_RS00655 IPR037294 ABC transporter, BtuC-like JOS54_RS00660 IPR037294 ABC transporter, BtuC-like JOS54_RS00660 IPR001626 ABC transporter, TroCD-like JOS54_RS00670 IPR011006 CheY-like superfamily JOS54_RS00670 IPR039420 Transcriptional regulatory protein WalR-like JOS54_RS00670 IPR001789 Signal transduction response regulator, receiver domain JOS54_RS00670 IPR001867 OmpR/PhoB-type DNA-binding domain JOS54_RS00670 IPR036388 Winged helix-like DNA-binding domain superfamily JOS54_RS00675 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JOS54_RS00675 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JOS54_RS00675 IPR005467 Histidine kinase domain JOS54_RS00675 IPR003660 HAMP domain JOS54_RS00675 IPR003594 Histidine kinase/HSP90-like ATPase JOS54_RS00675 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JOS54_RS00685 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS00685 IPR003439 ABC transporter-like JOS54_RS00685 IPR003593 AAA+ ATPase domain JOS54_RS00690 IPR006043 Xanthine/uracil/vitamin C permease JOS54_RS00690 IPR026033 Azaguanine-like transporters JOS54_RS00695 IPR029033 Histidine phosphatase superfamily JOS54_RS00695 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site JOS54_RS00695 IPR013078 Histidine phosphatase superfamily, clade-1 JOS54_RS00695 IPR005952 Phosphoglycerate mutase 1 JOS54_RS00715 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 JOS54_RS00715 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS00715 IPR015856 ABC transporter, CbiO/EcfA subunit JOS54_RS00715 IPR017871 ABC transporter, conserved site JOS54_RS00715 IPR003439 ABC transporter-like JOS54_RS00715 IPR003593 AAA+ ATPase domain JOS54_RS00720 IPR003439 ABC transporter-like JOS54_RS00720 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS00720 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 JOS54_RS00720 IPR017871 ABC transporter, conserved site JOS54_RS00720 IPR015856 ABC transporter, CbiO/EcfA subunit JOS54_RS00720 IPR003593 AAA+ ATPase domain JOS54_RS00725 IPR003339 ABC/ECF transporter, transmembrane component JOS54_RS00725 IPR024919 ECF transporter transmembrane protein EcfT JOS54_RS00730 IPR020103 Pseudouridine synthase, catalytic domain superfamily JOS54_RS00730 IPR001406 Pseudouridine synthase I, TruA JOS54_RS00730 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain JOS54_RS00730 IPR020095 Pseudouridine synthase I, TruA, C-terminal JOS54_RS00735 IPR013785 Aldolase-type TIM barrel JOS54_RS00735 IPR023955 D-tagatose-bisphosphate aldolase, class II, subunit GatY JOS54_RS00735 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY JOS54_RS00735 IPR000771 Fructose-bisphosphate aldolase, class-II JOS54_RS00740 IPR003352 Phosphotransferase system, EIIC JOS54_RS00740 IPR013014 Phosphotransferase system, EIIC component, type 2 JOS54_RS00745 IPR013011 Phosphotransferase system, EIIB component, type 2 JOS54_RS00745 IPR003501 Phosphotransferase system, EIIB component, type 2/3 JOS54_RS00745 IPR003353 Phosphotransferase system, fructose-specific IIB subunit JOS54_RS00745 IPR036095 PTS system IIB component-like superfamily JOS54_RS00750 IPR004715 Phosphotransferase system, IIA component fructose subfamily JOS54_RS00750 IPR013014 Phosphotransferase system, EIIC component, type 2 JOS54_RS00750 IPR003353 Phosphotransferase system, fructose-specific IIB subunit JOS54_RS00750 IPR006327 Phosphotransferase system, fructose IIC component JOS54_RS00750 IPR002178 PTS EIIA type-2 domain JOS54_RS00750 IPR016152 Phosphotransferase/anion transporter JOS54_RS00750 IPR036095 PTS system IIB component-like superfamily JOS54_RS00750 IPR003501 Phosphotransferase system, EIIB component, type 2/3 JOS54_RS00750 IPR013011 Phosphotransferase system, EIIB component, type 2 JOS54_RS00755 IPR013196 Helix-turn-helix, type 11 JOS54_RS00755 IPR007737 Mga helix-turn-helix domain JOS54_RS00755 IPR011608 PRD domain JOS54_RS00755 IPR036634 PRD domain superfamily JOS54_RS00755 IPR036390 Winged helix DNA-binding domain superfamily JOS54_RS00755 IPR036388 Winged helix-like DNA-binding domain superfamily JOS54_RS00755 IPR013011 Phosphotransferase system, EIIB component, type 2 JOS54_RS00755 IPR016152 Phosphotransferase/anion transporter JOS54_RS00755 IPR002178 PTS EIIA type-2 domain JOS54_RS00755 IPR036095 PTS system IIB component-like superfamily JOS54_RS00760 IPR005822 Ribosomal protein L13 JOS54_RS00760 IPR023563 Ribosomal protein L13, conserved site JOS54_RS00760 IPR036899 Ribosomal protein L13 superfamily JOS54_RS00760 IPR005823 Ribosomal protein L13, bacterial-type JOS54_RS00765 IPR020568 Ribosomal protein S5 domain 2-type fold JOS54_RS00765 IPR000754 Ribosomal protein S9 JOS54_RS00765 IPR023035 Ribosomal protein S9, bacterial/plastid JOS54_RS00765 IPR020574 Ribosomal protein S9, conserved site JOS54_RS00765 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JOS54_RS00780 IPR023536 Coenzyme A disulphide reductase, staphyolococci JOS54_RS00780 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily JOS54_RS00780 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JOS54_RS00780 IPR023753 FAD/NAD(P)-binding domain JOS54_RS00780 IPR036188 FAD/NAD(P)-binding domain superfamily JOS54_RS00780 IPR017758 Coenzyme A disulphide reductase JOS54_RS00795 IPR014528 Cyclic-di-AMP phosphodiesterase GdpP/PdeA JOS54_RS00795 IPR003156 DHHA1 domain JOS54_RS00795 IPR001667 DDH domain JOS54_RS00795 IPR000160 GGDEF domain JOS54_RS00795 IPR038763 DHH phosphoesterase superfamily JOS54_RS00800 IPR009027 Ribosomal protein L9/RNase H1, N-terminal JOS54_RS00800 IPR000244 Ribosomal protein L9 JOS54_RS00800 IPR020594 Ribosomal protein L9, bacteria/chloroplast JOS54_RS00800 IPR020069 Ribosomal protein L9, C-terminal JOS54_RS00800 IPR036791 Ribosomal protein L9, C-terminal domain superfamily JOS54_RS00800 IPR020070 Ribosomal protein L9, N-terminal JOS54_RS00800 IPR036935 Ribosomal protein L9, N-terminal domain superfamily JOS54_RS00805 IPR003593 AAA+ ATPase domain JOS54_RS00805 IPR007692 DNA helicase, DnaB type JOS54_RS00805 IPR007694 DNA helicase, DnaB-like, C-terminal JOS54_RS00805 IPR007693 DNA helicase, DnaB-like, N-terminal JOS54_RS00805 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal JOS54_RS00805 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS00805 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily JOS54_RS00815 IPR001279 Metallo-beta-lactamase JOS54_RS00815 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JOS54_RS00825 IPR029028 Alpha/beta knot methyltransferases JOS54_RS00825 IPR003742 RNA methyltransferase RlmH JOS54_RS00825 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JOS54_RS00830 IPR009040 Ferritin-like diiron domain JOS54_RS00830 IPR008331 Ferritin/DPS protein domain JOS54_RS00830 IPR041719 Ferritin, prokaryotic-type JOS54_RS00830 IPR001519 Ferritin JOS54_RS00830 IPR009078 Ferritin-like superfamily JOS54_RS00830 IPR012347 Ferritin-like JOS54_RS00835 IPR035895 HPr-like superfamily JOS54_RS00835 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site JOS54_RS00835 IPR000032 Phosphocarrier protein HPr-like JOS54_RS00835 IPR002114 Phosphotransferase system, HPr serine phosphorylation site JOS54_RS00840 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III JOS54_RS00840 IPR005843 Alpha-D-phosphohexomutase, C-terminal JOS54_RS00840 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily JOS54_RS00840 IPR016066 Alpha-D-phosphohexomutase, conserved site JOS54_RS00840 IPR005841 Alpha-D-phosphohexomutase superfamily JOS54_RS00840 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III JOS54_RS00840 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II JOS54_RS00840 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I JOS54_RS00850 IPR002043 Uracil-DNA glycosylase family 1 JOS54_RS00850 IPR036895 Uracil-DNA glycosylase-like domain superfamily JOS54_RS00850 IPR018085 Uracil-DNA glycosylase, active site JOS54_RS00850 IPR005122 Uracil-DNA glycosylase-like JOS54_RS00855 IPR001576 Phosphoglycerate kinase JOS54_RS00855 IPR015911 Phosphoglycerate kinase, conserved site JOS54_RS00855 IPR015824 Phosphoglycerate kinase, N-terminal JOS54_RS00855 IPR036043 Phosphoglycerate kinase superfamily JOS54_RS00860 IPR020861 Triosephosphate isomerase, active site JOS54_RS00860 IPR000652 Triosephosphate isomerase JOS54_RS00860 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic JOS54_RS00860 IPR035990 Triosephosphate isomerase superfamily JOS54_RS00860 IPR013785 Aldolase-type TIM barrel JOS54_RS00865 IPR036849 Enolase-like, C-terminal domain superfamily JOS54_RS00865 IPR029017 Enolase-like, N-terminal JOS54_RS00865 IPR020810 Enolase, C-terminal TIM barrel domain JOS54_RS00865 IPR020809 Enolase, conserved site JOS54_RS00865 IPR020811 Enolase, N-terminal JOS54_RS00865 IPR000941 Enolase JOS54_RS00875 IPR004692 Preprotein translocase SecG subunit JOS54_RS00880 IPR013223 Ribonuclease B, N-terminal OB domain JOS54_RS00880 IPR004476 Ribonuclease II/ribonuclease R JOS54_RS00880 IPR022966 Ribonuclease II/R, conserved site JOS54_RS00880 IPR003029 S1 domain JOS54_RS00880 IPR011805 Ribonuclease R JOS54_RS00880 IPR040476 RNase II/RNase R, cold shock domain JOS54_RS00880 IPR012340 Nucleic acid-binding, OB-fold JOS54_RS00880 IPR022967 RNA-binding domain, S1 JOS54_RS00880 IPR001900 Ribonuclease II/R JOS54_RS00885 IPR020081 SsrA-binding protein, conserved site JOS54_RS00885 IPR023620 Small protein B JOS54_RS00885 IPR000037 SsrA-binding protein JOS54_RS00910 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt JOS54_RS00915 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily JOS54_RS00915 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family JOS54_RS00915 IPR004785 Ribose 5-phosphate isomerase B JOS54_RS00920 IPR036188 FAD/NAD(P)-binding domain superfamily JOS54_RS00920 IPR010960 Flavocytochrome c JOS54_RS00920 IPR011031 Multihaem cytochrome JOS54_RS00920 IPR036280 Multiheme cytochrome superfamily JOS54_RS00920 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily JOS54_RS00920 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain JOS54_RS00920 IPR012286 Tetrahaem cytochrome domain JOS54_RS00930 IPR037219 Peptidase M41-like JOS54_RS00930 IPR000642 Peptidase M41 JOS54_RS00930 IPR011546 Peptidase M41, FtsH extracellular JOS54_RS00930 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS00930 IPR005936 Peptidase, FtsH JOS54_RS00930 IPR003960 ATPase, AAA-type, conserved site JOS54_RS00930 IPR003959 ATPase, AAA-type, core JOS54_RS00930 IPR041569 AAA ATPase, AAA+ lid domain JOS54_RS00930 IPR003593 AAA+ ATPase domain JOS54_RS00940 IPR012340 Nucleic acid-binding, OB-fold JOS54_RS00940 IPR015365 Elongation factor P, C-terminal JOS54_RS00940 IPR008991 Translation protein SH3-like domain superfamily JOS54_RS00940 IPR014722 Ribosomal protein L2, domain 2 JOS54_RS00940 IPR020599 Translation elongation factor P/YeiP JOS54_RS00940 IPR013185 Translation elongation factor, KOW-like JOS54_RS00940 IPR001059 Translation elongation factor P/YeiP, central JOS54_RS00940 IPR011768 Translation elongation factor P JOS54_RS00940 IPR013852 Translation elongation factor P/YeiP, conserved site JOS54_RS00945 IPR002347 Short-chain dehydrogenase/reductase SDR JOS54_RS00945 IPR020904 Short-chain dehydrogenase/reductase, conserved site JOS54_RS00945 IPR036291 NAD(P)-binding domain superfamily JOS54_RS00950 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JOS54_RS00950 IPR009651 Putative methionine gamma-lyase JOS54_RS00950 IPR015424 Pyridoxal phosphate-dependent transferase JOS54_RS00955 IPR029052 Metallo-dependent phosphatase-like JOS54_RS00955 IPR019079 Capsule synthesis protein, CapA JOS54_RS00970 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS00970 IPR025669 AAA domain JOS54_RS00995 IPR016368 Virulence-associated protein D JOS54_RS00995 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 JOS54_RS01095 IPR025246 Transposase IS30-like HTH domain JOS54_RS01095 IPR001598 Transposase, IS30, conserved site JOS54_RS01095 IPR001584 Integrase, catalytic core JOS54_RS01095 IPR012337 Ribonuclease H-like superfamily JOS54_RS01095 IPR036397 Ribonuclease H superfamily JOS54_RS01150 IPR002178 PTS EIIA type-2 domain JOS54_RS01150 IPR016152 Phosphotransferase/anion transporter JOS54_RS01155 IPR036095 PTS system IIB component-like superfamily JOS54_RS01155 IPR013011 Phosphotransferase system, EIIB component, type 2 JOS54_RS01155 IPR003501 Phosphotransferase system, EIIB component, type 2/3 JOS54_RS01160 IPR004703 Phosphotransferase system, sugar-specific permease component JOS54_RS01165 IPR023593 2-keto-3-deoxy-L-rhamnonate aldolase JOS54_RS01165 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily JOS54_RS01165 IPR040442 Pyruvate kinase-like domain superfamily JOS54_RS01165 IPR005000 HpcH/HpaI aldolase/citrate lyase domain JOS54_RS01175 IPR000644 CBS domain JOS54_RS01175 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type JOS54_RS01175 IPR001347 Sugar isomerase (SIS) JOS54_RS01175 IPR035474 KpsF-like, SIS domain JOS54_RS01190 IPR029056 Ribokinase-like JOS54_RS01190 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site JOS54_RS01190 IPR011611 Carbohydrate kinase PfkB JOS54_RS01195 IPR007342 Pseudouridine-5'-phosphate glycosidase JOS54_RS01195 IPR022830 Indigoidine synthase A-like JOS54_RS01200 IPR003679 Aminoglycoside N(3)-acetyltransferase JOS54_RS01200 IPR028345 Aminoglycoside 3-N-acetyltransferase-like JOS54_RS01205 IPR003018 GAF domain JOS54_RS01205 IPR000614 Free Met sulfoxide reductase conserved site JOS54_RS01205 IPR029016 GAF-like domain superfamily JOS54_RS01210 IPR016882 Uncharacterised protein family UPF0374 JOS54_RS01210 IPR035930 FomD-like superfamily JOS54_RS01210 IPR007295 Domain of unknown function DUF402 JOS54_RS01230 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily JOS54_RS01230 IPR003709 Peptidase M15B JOS54_RS01235 IPR013012 Phosphotransferase system, EIIB component, type 3 JOS54_RS01235 IPR003501 Phosphotransferase system, EIIB component, type 2/3 JOS54_RS01235 IPR036095 PTS system IIB component-like superfamily JOS54_RS01245 IPR039421 Type I protein exporter JOS54_RS01245 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS01245 IPR003593 AAA+ ATPase domain JOS54_RS01245 IPR011527 ABC transporter type 1, transmembrane domain JOS54_RS01245 IPR036640 ABC transporter type 1, transmembrane domain superfamily JOS54_RS01245 IPR017871 ABC transporter, conserved site JOS54_RS01245 IPR003439 ABC transporter-like JOS54_RS01250 IPR036640 ABC transporter type 1, transmembrane domain superfamily JOS54_RS01250 IPR003593 AAA+ ATPase domain JOS54_RS01250 IPR011527 ABC transporter type 1, transmembrane domain JOS54_RS01250 IPR039421 Type I protein exporter JOS54_RS01250 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS01250 IPR003439 ABC transporter-like JOS54_RS01255 IPR023298 P-type ATPase, transmembrane domain superfamily JOS54_RS01255 IPR023299 P-type ATPase, cytoplasmic domain N JOS54_RS01255 IPR018303 P-type ATPase, phosphorylation site JOS54_RS01255 IPR001757 P-type ATPase JOS54_RS01255 IPR027256 P-type ATPase, subfamily IB JOS54_RS01255 IPR036163 Heavy metal-associated domain superfamily JOS54_RS01255 IPR008250 P-type ATPase, A domain superfamily JOS54_RS01255 IPR036412 HAD-like superfamily JOS54_RS01255 IPR023214 HAD superfamily JOS54_RS01255 IPR017969 Heavy-metal-associated, conserved site JOS54_RS01255 IPR006121 Heavy metal-associated domain, HMA JOS54_RS01260 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV JOS54_RS01275 IPR016152 Phosphotransferase/anion transporter JOS54_RS01275 IPR002178 PTS EIIA type-2 domain JOS54_RS01280 IPR002178 PTS EIIA type-2 domain JOS54_RS01280 IPR016152 Phosphotransferase/anion transporter JOS54_RS01285 IPR003501 Phosphotransferase system, EIIB component, type 2/3 JOS54_RS01285 IPR013011 Phosphotransferase system, EIIB component, type 2 JOS54_RS01285 IPR036095 PTS system IIB component-like superfamily JOS54_RS01290 IPR004703 Phosphotransferase system, sugar-specific permease component JOS54_RS01295 IPR022951 Uncharacterised protein family UPF0309 JOS54_RS01295 IPR001347 Sugar isomerase (SIS) JOS54_RS01295 IPR035472 RpiR-like, SIS domain JOS54_RS01315 IPR003732 D-aminoacyl-tRNA deacylase DTD JOS54_RS01315 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily JOS54_RS01320 IPR036291 NAD(P)-binding domain superfamily JOS54_RS01320 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JOS54_RS01320 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase JOS54_RS01320 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site JOS54_RS01320 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JOS54_RS01325 IPR009296 Protein of unknown function DUF951 JOS54_RS01330 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 JOS54_RS01330 IPR031167 OBG-type guanine nucleotide-binding (G) domain JOS54_RS01330 IPR012675 Beta-grasp domain superfamily JOS54_RS01330 IPR012676 TGS-like JOS54_RS01330 IPR041706 YchF, N-terminal JOS54_RS01330 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS01330 IPR023192 TGS-like domain superfamily JOS54_RS01330 IPR013029 YchF, C-terminal domain JOS54_RS01330 IPR006073 GTP binding domain JOS54_RS01330 IPR004095 TGS JOS54_RS01335 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal JOS54_RS01335 IPR010375 Cyclic-di-AMP receptor JOS54_RS01335 IPR011322 Nitrogen regulatory PII-like, alpha/beta JOS54_RS01340 IPR032810 CCA-adding enzyme, C-terminal JOS54_RS01340 IPR023068 CCA-adding enzyme, firmicutes JOS54_RS01340 IPR002646 Poly A polymerase, head domain JOS54_RS01340 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain JOS54_RS01345 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily JOS54_RS01345 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site JOS54_RS01345 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase JOS54_RS01350 IPR006674 HD domain JOS54_RS01350 IPR003607 HD/PDEase domain JOS54_RS01365 IPR013785 Aldolase-type TIM barrel JOS54_RS01365 IPR000771 Fructose-bisphosphate aldolase, class-II JOS54_RS01365 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 JOS54_RS01365 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype JOS54_RS01370 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JOS54_RS01370 IPR023214 HAD superfamily JOS54_RS01370 IPR041492 Haloacid dehalogenase-like hydrolase JOS54_RS01370 IPR006439 HAD hydrolase, subfamily IA JOS54_RS01370 IPR036412 HAD-like superfamily JOS54_RS01375 IPR001986 Enolpyruvate transferase domain JOS54_RS01375 IPR036968 Enolpyruvate transferase domain superfamily JOS54_RS01375 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta JOS54_RS01375 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase JOS54_RS01380 IPR034704 L28p-like JOS54_RS01380 IPR002150 Ribosomal protein L31 JOS54_RS01380 IPR027491 Ribosomal protein L31 type A JOS54_RS01380 IPR042105 Ribosomal protein L31 superfamily JOS54_RS01385 IPR005139 Peptide chain release factor JOS54_RS01385 IPR000352 Peptide chain release factor class I JOS54_RS01385 IPR004373 Peptide chain release factor 1 JOS54_RS01390 IPR004556 Methyltransferase HemK-like JOS54_RS01390 IPR040758 Release factor glutamine methyltransferase, N-terminal domain JOS54_RS01390 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific JOS54_RS01390 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JOS54_RS01390 IPR025714 Methyltransferase domain JOS54_RS01390 IPR002052 DNA methylase, N-6 adenine-specific, conserved site JOS54_RS01395 IPR000917 Sulfatase, N-terminal JOS54_RS01395 IPR012160 Lipoteichoic acid synthase-like JOS54_RS01395 IPR017850 Alkaline-phosphatase-like, core domain superfamily JOS54_RS01400 IPR009835 Sortase B family JOS54_RS01400 IPR023365 Sortase domain superfamily JOS54_RS01400 IPR005754 Sortase family JOS54_RS01400 IPR015986 Sortase B, Firmicutes JOS54_RS01405 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase JOS54_RS01405 IPR038009 GlmU, C-terminal LbH domain JOS54_RS01405 IPR025877 MobA-like NTP transferase JOS54_RS01405 IPR011004 Trimeric LpxA-like superfamily JOS54_RS01405 IPR029044 Nucleotide-diphospho-sugar transferases JOS54_RS01405 IPR001451 Hexapeptide repeat JOS54_RS01415 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily JOS54_RS01415 IPR023535 Threonylcarbamoyl-AMP synthase JOS54_RS01415 IPR006070 YrdC-like domain JOS54_RS01425 IPR034332 Uracil phosphoribosyltransferase, bacterial-type JOS54_RS01425 IPR000836 Phosphoribosyltransferase domain JOS54_RS01425 IPR005765 Uracil phosphoribosyl transferase JOS54_RS01425 IPR029057 Phosphoribosyltransferase-like JOS54_RS01440 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JOS54_RS01440 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal JOS54_RS01440 IPR012094 tRNA(Ile)-lysidine synthase JOS54_RS01440 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal JOS54_RS01445 IPR029057 Phosphoribosyltransferase-like JOS54_RS01445 IPR000836 Phosphoribosyltransferase domain JOS54_RS01445 IPR005904 Hypoxanthine phosphoribosyl transferase JOS54_RS01450 IPR003960 ATPase, AAA-type, conserved site JOS54_RS01450 IPR003593 AAA+ ATPase domain JOS54_RS01450 IPR041569 AAA ATPase, AAA+ lid domain JOS54_RS01450 IPR003959 ATPase, AAA-type, core JOS54_RS01450 IPR005936 Peptidase, FtsH JOS54_RS01450 IPR037219 Peptidase M41-like JOS54_RS01450 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS01450 IPR000642 Peptidase M41 JOS54_RS01450 IPR011546 Peptidase M41, FtsH extracellular JOS54_RS01465 IPR005084 Carbohydrate binding module family 6 JOS54_RS01465 IPR023232 Glycoside hydrolase, family 2, active site JOS54_RS01465 IPR006103 Glycoside hydrolase family 2, catalytic domain JOS54_RS01465 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich JOS54_RS01465 IPR006104 Glycosyl hydrolases family 2, sugar binding domain JOS54_RS01465 IPR017853 Glycoside hydrolase superfamily JOS54_RS01465 IPR013783 Immunoglobulin-like fold JOS54_RS01465 IPR008979 Galactose-binding-like domain superfamily JOS54_RS01465 IPR026876 Fn3 associated repeat JOS54_RS01465 IPR032311 Domain of unknown function DUF4982 JOS54_RS01465 IPR006101 Glycoside hydrolase, family 2 JOS54_RS01465 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily JOS54_RS01470 IPR000397 Heat shock protein Hsp33 JOS54_RS01470 IPR016154 Heat shock protein Hsp33, C-terminal JOS54_RS01470 IPR016153 Heat shock protein Hsp33, N-terminal JOS54_RS01475 IPR018517 tRNA-dihydrouridine synthase, conserved site JOS54_RS01475 IPR001269 tRNA-dihydrouridine synthase JOS54_RS01475 IPR013785 Aldolase-type TIM barrel JOS54_RS01475 IPR035587 DUS-like, FMN-binding domain JOS54_RS01475 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal JOS54_RS01475 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 JOS54_RS01480 IPR005583 Peroxide stress protein YaaA JOS54_RS01485 IPR005583 Peroxide stress protein YaaA JOS54_RS01505 IPR003735 Metal-sensitive transcriptional repressor JOS54_RS01505 IPR038390 Metal-sensitive transcriptional repressor superfamily JOS54_RS01510 IPR027256 P-type ATPase, subfamily IB JOS54_RS01510 IPR018303 P-type ATPase, phosphorylation site JOS54_RS01510 IPR023298 P-type ATPase, transmembrane domain superfamily JOS54_RS01510 IPR036163 Heavy metal-associated domain superfamily JOS54_RS01510 IPR008250 P-type ATPase, A domain superfamily JOS54_RS01510 IPR036412 HAD-like superfamily JOS54_RS01510 IPR001757 P-type ATPase JOS54_RS01510 IPR023214 HAD superfamily JOS54_RS01510 IPR006121 Heavy metal-associated domain, HMA JOS54_RS01510 IPR017969 Heavy-metal-associated, conserved site JOS54_RS01510 IPR023299 P-type ATPase, cytoplasmic domain N JOS54_RS01515 IPR036188 FAD/NAD(P)-binding domain superfamily JOS54_RS01515 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JOS54_RS01515 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I JOS54_RS01515 IPR023753 FAD/NAD(P)-binding domain JOS54_RS01515 IPR036163 Heavy metal-associated domain superfamily JOS54_RS01515 IPR017969 Heavy-metal-associated, conserved site JOS54_RS01515 IPR021179 Mercury(II) reductase JOS54_RS01515 IPR006121 Heavy metal-associated domain, HMA JOS54_RS01515 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily JOS54_RS01515 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site JOS54_RS01520 IPR018170 Aldo/keto reductase, conserved site JOS54_RS01520 IPR020471 Aldo/keto reductase JOS54_RS01520 IPR023210 NADP-dependent oxidoreductase domain JOS54_RS01520 IPR036812 NADP-dependent oxidoreductase domain superfamily JOS54_RS01540 IPR000836 Phosphoribosyltransferase domain JOS54_RS01540 IPR029057 Phosphoribosyltransferase-like JOS54_RS01540 IPR023050 Bifunctional protein PyrR JOS54_RS01550 IPR002318 Alanine-tRNA ligase, class IIc JOS54_RS01550 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain JOS54_RS01550 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily JOS54_RS01550 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria JOS54_RS01550 IPR003156 DHHA1 domain JOS54_RS01550 IPR009000 Translation protein, beta-barrel domain superfamily JOS54_RS01550 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily JOS54_RS01550 IPR012947 Threonyl/alanyl tRNA synthetase, SAD JOS54_RS01550 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal JOS54_RS01565 IPR009051 Alpha-helical ferredoxin JOS54_RS01565 IPR036188 FAD/NAD(P)-binding domain superfamily JOS54_RS01565 IPR023753 FAD/NAD(P)-binding domain JOS54_RS01565 IPR028261 Dihydroprymidine dehydrogenase domain II JOS54_RS01645 IPR007563 Protein of unknown function DUF554 JOS54_RS01650 IPR019079 Capsule synthesis protein, CapA JOS54_RS01650 IPR029052 Metallo-dependent phosphatase-like JOS54_RS01670 IPR017871 ABC transporter, conserved site JOS54_RS01670 IPR003439 ABC transporter-like JOS54_RS01670 IPR003593 AAA+ ATPase domain JOS54_RS01670 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS01685 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily JOS54_RS01685 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase JOS54_RS01690 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant JOS54_RS01690 IPR024706 Peroxiredoxin, AhpC-type JOS54_RS01690 IPR036249 Thioredoxin-like superfamily JOS54_RS01690 IPR013766 Thioredoxin domain JOS54_RS01695 IPR019777 Formate C-acetyltransferase glycine radical, conserved site JOS54_RS01695 IPR001150 Glycine radical domain JOS54_RS01695 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic JOS54_RS01695 IPR005144 ATP-cone domain JOS54_RS01700 IPR001989 Radical-activating enzyme, conserved site JOS54_RS01700 IPR013785 Aldolase-type TIM barrel JOS54_RS01700 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic JOS54_RS01700 IPR034457 Organic radical-activating enzymes JOS54_RS01705 IPR008254 Flavodoxin/nitric oxide synthase JOS54_RS01705 IPR001226 Flavodoxin, conserved site JOS54_RS01705 IPR029039 Flavoprotein-like superfamily JOS54_RS01705 IPR010087 Flavodoxin, short chain JOS54_RS01710 IPR001667 DDH domain JOS54_RS01710 IPR038763 DHH phosphoesterase superfamily JOS54_RS01710 IPR004097 DHHA2 domain JOS54_RS01710 IPR038222 DHHA2 domain superfamily JOS54_RS01710 IPR010766 DRTGG JOS54_RS01710 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily JOS54_RS01710 IPR000644 CBS domain JOS54_RS01735 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal JOS54_RS01735 IPR001647 DNA-binding HTH domain, TetR-type JOS54_RS01735 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JOS54_RS01735 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JOS54_RS01735 IPR009057 Homeobox-like domain superfamily JOS54_RS01740 IPR039421 Type I protein exporter JOS54_RS01740 IPR011527 ABC transporter type 1, transmembrane domain JOS54_RS01740 IPR003593 AAA+ ATPase domain JOS54_RS01740 IPR003439 ABC transporter-like JOS54_RS01740 IPR036640 ABC transporter type 1, transmembrane domain superfamily JOS54_RS01740 IPR017871 ABC transporter, conserved site JOS54_RS01740 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS01745 IPR003593 AAA+ ATPase domain JOS54_RS01745 IPR039421 Type I protein exporter JOS54_RS01745 IPR011527 ABC transporter type 1, transmembrane domain JOS54_RS01745 IPR036640 ABC transporter type 1, transmembrane domain superfamily JOS54_RS01745 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS01745 IPR003439 ABC transporter-like JOS54_RS01750 IPR003439 ABC transporter-like JOS54_RS01750 IPR017871 ABC transporter, conserved site JOS54_RS01750 IPR003593 AAA+ ATPase domain JOS54_RS01750 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS01820 IPR001093 IMP dehydrogenase/GMP reductase JOS54_RS01820 IPR015875 IMP dehydrogenase / GMP reductase, conserved site JOS54_RS01820 IPR005994 Guanosine monophosphate reductase, type2 JOS54_RS01820 IPR013785 Aldolase-type TIM barrel JOS54_RS01830 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JOS54_RS01830 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding JOS54_RS01830 IPR001278 Arginine-tRNA ligase JOS54_RS01830 IPR008909 DALR anticodon binding JOS54_RS01830 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JOS54_RS01830 IPR005148 Arginyl tRNA synthetase N-terminal domain JOS54_RS01830 IPR035684 Arginyl-tRNA synthetase, catalytic core domain JOS54_RS01830 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily JOS54_RS01835 IPR003876 Arginine deiminase JOS54_RS01840 IPR024904 Ornithine carbamoyltransferase JOS54_RS01840 IPR006130 Aspartate/ornithine carbamoyltransferase JOS54_RS01840 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily JOS54_RS01840 IPR002292 Ornithine/putrescine carbamoyltransferase JOS54_RS01840 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain JOS54_RS01840 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding JOS54_RS01845 IPR003964 Carbamate kinase JOS54_RS01845 IPR036393 Acetylglutamate kinase-like superfamily JOS54_RS01845 IPR001048 Aspartate/glutamate/uridylate kinase JOS54_RS01850 IPR018385 C4-dicarboxylate anaerobic carrier-like JOS54_RS01855 IPR018060 DNA binding HTH domain, AraC-type JOS54_RS01855 IPR018062 HTH domain AraC-type, conserved site JOS54_RS01855 IPR009057 Homeobox-like domain superfamily JOS54_RS01855 IPR037923 Transcription regulator HTH-like JOS54_RS01855 IPR014710 RmlC-like jelly roll fold JOS54_RS01855 IPR020449 Transcription regulator HTH, AraC- type JOS54_RS01855 IPR003313 AraC-type arabinose-binding/dimerisation domain JOS54_RS01865 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site JOS54_RS01865 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB JOS54_RS01865 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA JOS54_RS01870 IPR011782 Peptidase S1C, Do JOS54_RS01870 IPR001940 Peptidase S1C JOS54_RS01870 IPR001478 PDZ domain JOS54_RS01870 IPR036034 PDZ superfamily JOS54_RS01870 IPR009003 Peptidase S1, PA clan JOS54_RS01875 IPR009057 Homeobox-like domain superfamily JOS54_RS01875 IPR038965 Transposase InsF-like JOS54_RS01875 IPR001584 Integrase, catalytic core JOS54_RS01875 IPR012337 Ribonuclease H-like superfamily JOS54_RS01875 IPR036397 Ribonuclease H superfamily JOS54_RS01905 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS01905 IPR025121 GTPase HflX, N-terminal JOS54_RS01905 IPR030394 HflX-type guanine nucleotide-binding (G) domain JOS54_RS01905 IPR032305 GTP-binding protein, middle domain JOS54_RS01905 IPR006073 GTP binding domain JOS54_RS01905 IPR042108 GTPase HflX, N-terminal domain superfamily JOS54_RS01905 IPR016496 GTPase HflX JOS54_RS01910 IPR001948 Peptidase M18 JOS54_RS01910 IPR023358 Peptidase M18, domain 2 JOS54_RS01910 IPR022983 M18 family aminopeptidase 1, putative JOS54_RS01915 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site JOS54_RS01915 IPR023086 Phosphoglycerate mutase, GpmB, probable JOS54_RS01915 IPR013078 Histidine phosphatase superfamily, clade-1 JOS54_RS01915 IPR029033 Histidine phosphatase superfamily JOS54_RS01925 IPR012286 Tetrahaem cytochrome domain JOS54_RS01925 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily JOS54_RS01925 IPR036280 Multiheme cytochrome superfamily JOS54_RS01925 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain JOS54_RS01925 IPR010960 Flavocytochrome c JOS54_RS01925 IPR036188 FAD/NAD(P)-binding domain superfamily JOS54_RS01925 IPR011031 Multihaem cytochrome JOS54_RS01930 IPR003352 Phosphotransferase system, EIIC JOS54_RS01930 IPR004796 Phosphotransferase system, cellobiose-type IIC component JOS54_RS01930 IPR004501 Phosphotransferase system, EIIC component, type 3 JOS54_RS01935 IPR006104 Glycosyl hydrolases family 2, sugar binding domain JOS54_RS01935 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich JOS54_RS01935 IPR023230 Glycoside hydrolase, family 2, conserved site JOS54_RS01935 IPR006103 Glycoside hydrolase family 2, catalytic domain JOS54_RS01935 IPR023232 Glycoside hydrolase, family 2, active site JOS54_RS01935 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily JOS54_RS01935 IPR006101 Glycoside hydrolase, family 2 JOS54_RS01935 IPR013783 Immunoglobulin-like fold JOS54_RS01935 IPR008979 Galactose-binding-like domain superfamily JOS54_RS01935 IPR017853 Glycoside hydrolase superfamily JOS54_RS01940 IPR018060 DNA binding HTH domain, AraC-type JOS54_RS01940 IPR018062 HTH domain AraC-type, conserved site JOS54_RS01940 IPR014710 RmlC-like jelly roll fold JOS54_RS01940 IPR020449 Transcription regulator HTH, AraC- type JOS54_RS01940 IPR009057 Homeobox-like domain superfamily JOS54_RS01940 IPR011051 RmlC-like cupin domain superfamily JOS54_RS01945 IPR036237 Xylose isomerase-like superfamily JOS54_RS01945 IPR004628 Mannonate dehydratase JOS54_RS01950 IPR036291 NAD(P)-binding domain superfamily JOS54_RS01950 IPR013131 Mannitol dehydrogenase, N-terminal JOS54_RS01950 IPR013118 Mannitol dehydrogenase, C-terminal JOS54_RS01950 IPR013328 6-phosphogluconate dehydrogenase, domain 2 JOS54_RS01950 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily JOS54_RS01960 IPR003766 Uronate isomerase JOS54_RS01960 IPR032466 Metal-dependent hydrolase JOS54_RS01980 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY JOS54_RS01985 IPR002288 DNA gyrase B subunit, C-terminal JOS54_RS01985 IPR006171 TOPRIM domain JOS54_RS01985 IPR018522 DNA topoisomerase, type IIA, conserved site JOS54_RS01985 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 JOS54_RS01985 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JOS54_RS01985 IPR003594 Histidine kinase/HSP90-like ATPase JOS54_RS01985 IPR001241 DNA topoisomerase, type IIA JOS54_RS01985 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes JOS54_RS01985 IPR020568 Ribosomal protein S5 domain 2-type fold JOS54_RS01985 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JOS54_RS01985 IPR013760 DNA topoisomerase, type IIA-like domain superfamily JOS54_RS01985 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal JOS54_RS01990 IPR005741 DNA topoisomerase IV subunit A, Gram-positive JOS54_RS01990 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily JOS54_RS01990 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta JOS54_RS01990 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal JOS54_RS01990 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat JOS54_RS01990 IPR013760 DNA topoisomerase, type IIA-like domain superfamily JOS54_RS01990 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal JOS54_RS01995 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS01995 IPR019988 GTP-binding protein, riobosome biogenesis, YqeH JOS54_RS01995 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain JOS54_RS01995 IPR006073 GTP binding domain JOS54_RS02005 IPR004821 Cytidyltransferase-like domain JOS54_RS02005 IPR006674 HD domain JOS54_RS02005 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase JOS54_RS02005 IPR005249 Conserved hypothetical protein CHP00488 JOS54_RS02005 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JOS54_RS02005 IPR003607 HD/PDEase domain JOS54_RS02015 IPR036388 Winged helix-like DNA-binding domain superfamily JOS54_RS02015 IPR006343 DnaD domain JOS54_RS02015 IPR034829 DnaD-like domain superfamily JOS54_RS02020 IPR004035 Endonuclease III, iron-sulphur binding site JOS54_RS02020 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif JOS54_RS02020 IPR004036 Endonuclease III-like, conserved site-2 JOS54_RS02020 IPR011257 DNA glycosylase JOS54_RS02020 IPR003265 HhH-GPD domain JOS54_RS02020 IPR000445 Helix-hairpin-helix motif JOS54_RS02020 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal JOS54_RS02020 IPR005759 Endonuclease III JOS54_RS02025 IPR003797 DegV JOS54_RS02040 IPR012338 Beta-lactamase/transpeptidase-like JOS54_RS02040 IPR003961 Fibronectin type III JOS54_RS02040 IPR001460 Penicillin-binding protein, transpeptidase JOS54_RS02040 IPR036950 Penicillin binding protein transglycosylase domain JOS54_RS02040 IPR013783 Immunoglobulin-like fold JOS54_RS02040 IPR001264 Glycosyl transferase, family 51 JOS54_RS02040 IPR036116 Fibronectin type III superfamily JOS54_RS02040 IPR023346 Lysozyme-like domain superfamily JOS54_RS02045 IPR011335 Restriction endonuclease type II-like JOS54_RS02045 IPR011856 tRNA endonuclease-like domain superfamily JOS54_RS02045 IPR004612 Holliday junction resolvase RecU JOS54_RS02050 IPR011229 Cell cycle protein GpsB JOS54_RS02050 IPR019933 DivIVA domain JOS54_RS02050 IPR007793 DivIVA family JOS54_RS02060 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase JOS54_RS02060 IPR000462 CDP-alcohol phosphatidyltransferase JOS54_RS02065 IPR023400 DNA recombination and repair protein RecA, C-terminal JOS54_RS02065 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain JOS54_RS02065 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS02065 IPR020584 DNA recombination/repair protein RecA, conserved site JOS54_RS02065 IPR013765 DNA recombination and repair protein RecA JOS54_RS02065 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface JOS54_RS02065 IPR003593 AAA+ ATPase domain JOS54_RS02070 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase JOS54_RS02070 IPR000713 Mur ligase, N-terminal catalytic domain JOS54_RS02070 IPR013221 Mur ligase, central JOS54_RS02070 IPR036615 Mur ligase, C-terminal domain superfamily JOS54_RS02070 IPR035911 MurE/MurF, N-terminal JOS54_RS02070 IPR004101 Mur ligase, C-terminal JOS54_RS02070 IPR036565 Mur-like, catalytic domain superfamily JOS54_RS02070 IPR018109 Folylpolyglutamate synthetase, conserved site JOS54_RS02080 IPR022711 Ribonuclease Y, N-terminal JOS54_RS02080 IPR006674 HD domain JOS54_RS02080 IPR006675 HDIG domain JOS54_RS02080 IPR004087 K Homology domain JOS54_RS02080 IPR004088 K Homology domain, type 1 JOS54_RS02080 IPR036612 K Homology domain, type 1 superfamily JOS54_RS02080 IPR017705 Ribonuclease Y JOS54_RS02080 IPR003607 HD/PDEase domain JOS54_RS02085 IPR005839 Methylthiotransferase JOS54_RS02085 IPR006638 Elp3/MiaB/NifB JOS54_RS02085 IPR023404 Radical SAM, alpha/beta horseshoe JOS54_RS02085 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB JOS54_RS02085 IPR038135 Methylthiotransferase, N-terminal domain superfamily JOS54_RS02085 IPR013848 Methylthiotransferase, N-terminal JOS54_RS02085 IPR020612 Methylthiotransferase, conserved site JOS54_RS02085 IPR007197 Radical SAM JOS54_RS02085 IPR002792 TRAM domain JOS54_RS02090 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JOS54_RS02090 IPR001279 Metallo-beta-lactamase JOS54_RS02090 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain JOS54_RS02090 IPR041636 Ribonuclease J, C-terminal JOS54_RS02090 IPR030854 Ribonuclease J, bacteria JOS54_RS02090 IPR042173 Ribonuclease J, domain 2 JOS54_RS02090 IPR004613 Ribonuclease J JOS54_RS02095 IPR041027 FtsK alpha domain JOS54_RS02095 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS02095 IPR036388 Winged helix-like DNA-binding domain superfamily JOS54_RS02095 IPR003593 AAA+ ATPase domain JOS54_RS02095 IPR018541 FtsK gamma domain JOS54_RS02095 IPR002543 FtsK domain JOS54_RS02095 IPR036390 Winged helix DNA-binding domain superfamily JOS54_RS02110 IPR013822 Signal recognition particle SRP54, helical bundle JOS54_RS02110 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily JOS54_RS02110 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS02110 IPR003593 AAA+ ATPase domain JOS54_RS02110 IPR004125 Signal recognition particle, SRP54 subunit, M-domain JOS54_RS02110 IPR004780 Signal recognition particle protein JOS54_RS02110 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain JOS54_RS02110 IPR022941 Signal recognition particle, SRP54 subunit JOS54_RS02110 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily JOS54_RS02115 IPR023803 Ribosomal protein S16 domain superfamily JOS54_RS02115 IPR020592 Ribosomal protein S16, conserved site JOS54_RS02115 IPR000307 Ribosomal protein S16 JOS54_RS02125 IPR002676 RimM, N-terminal JOS54_RS02125 IPR011033 PRC-barrel-like superfamily JOS54_RS02125 IPR027275 PRC-barrel domain JOS54_RS02125 IPR011961 16S rRNA processing protein RimM JOS54_RS02125 IPR009000 Translation protein, beta-barrel domain superfamily JOS54_RS02125 IPR036976 RimM, N-terminal domain superfamily JOS54_RS02130 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain JOS54_RS02130 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JOS54_RS02130 IPR029028 Alpha/beta knot methyltransferases JOS54_RS02130 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria JOS54_RS02130 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal JOS54_RS02140 IPR005744 Hly-III JOS54_RS02140 IPR004254 AdipoR/Haemolysin-III-related JOS54_RS02155 IPR036702 ComB-like superfamily JOS54_RS02155 IPR005238 ComB-like JOS54_RS02165 IPR001857 Ribosomal protein L19 JOS54_RS02165 IPR018257 Ribosomal protein L19, conserved site JOS54_RS02165 IPR008991 Translation protein SH3-like domain superfamily JOS54_RS02165 IPR038657 Ribosomal protein L19 superfamily JOS54_RS02170 IPR019533 Peptidase S26 JOS54_RS02170 IPR036286 LexA/Signal peptidase-like superfamily JOS54_RS02170 IPR019757 Peptidase S26A, signal peptidase I, lysine active site JOS54_RS02170 IPR019758 Peptidase S26A, signal peptidase I, conserved site JOS54_RS02170 IPR000223 Peptidase S26A, signal peptidase I JOS54_RS02170 IPR019756 Peptidase S26A, signal peptidase I, serine active site JOS54_RS02175 IPR006073 GTP binding domain JOS54_RS02175 IPR016478 GTPase, MTG1 JOS54_RS02175 IPR019991 GTP-binding protein, ribosome biogenesis JOS54_RS02175 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS02175 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily JOS54_RS02175 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain JOS54_RS02180 IPR022898 Ribonuclease HII JOS54_RS02180 IPR012337 Ribonuclease H-like superfamily JOS54_RS02180 IPR024567 Ribonuclease HII/HIII domain JOS54_RS02180 IPR036397 Ribonuclease H superfamily JOS54_RS02180 IPR001352 Ribonuclease HII/HIII JOS54_RS02185 IPR041104 DNA processing protein A, sterile alpha motif domain JOS54_RS02185 IPR003488 DNA recombination-mediator protein A JOS54_RS02190 IPR006171 TOPRIM domain JOS54_RS02190 IPR028612 DNA topoisomerase I, type IA JOS54_RS02190 IPR003601 DNA topoisomerase, type IA, domain 2 JOS54_RS02190 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 JOS54_RS02190 IPR013497 DNA topoisomerase, type IA, central JOS54_RS02190 IPR023406 DNA topoisomerase, type IA, active site JOS54_RS02190 IPR000380 DNA topoisomerase, type IA JOS54_RS02190 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 JOS54_RS02190 IPR005733 DNA topoisomerase I, bacterial-type JOS54_RS02190 IPR013498 DNA topoisomerase, type IA, zn finger JOS54_RS02190 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 JOS54_RS02190 IPR034149 DNA topoisomerase 1, TOPRIM domain JOS54_RS02190 IPR003602 DNA topoisomerase, type IA, DNA-binding domain JOS54_RS02190 IPR023405 DNA topoisomerase, type IA, core domain JOS54_RS02195 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO JOS54_RS02195 IPR036188 FAD/NAD(P)-binding domain superfamily JOS54_RS02195 IPR020595 MnmG-related, conserved site JOS54_RS02195 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related JOS54_RS02200 IPR023009 Tyrosine recombinase XerC/XerD JOS54_RS02200 IPR004107 Integrase, SAM-like, N-terminal JOS54_RS02200 IPR010998 Integrase/recombinase, N-terminal JOS54_RS02200 IPR002104 Integrase, catalytic domain JOS54_RS02200 IPR013762 Integrase-like, catalytic domain superfamily JOS54_RS02200 IPR011010 DNA breaking-rejoining enzyme, catalytic core JOS54_RS02200 IPR011931 Tyrosine recombinase XerC JOS54_RS02225 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid JOS54_RS02225 IPR018130 Ribosomal protein S2, conserved site JOS54_RS02225 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily JOS54_RS02225 IPR001865 Ribosomal protein S2 JOS54_RS02230 IPR009060 UBA-like superfamily JOS54_RS02230 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation JOS54_RS02230 IPR001816 Translation elongation factor EFTs/EF1B JOS54_RS02230 IPR036402 Elongation factor Ts, dimerisation domain superfamily JOS54_RS02230 IPR018101 Translation elongation factor Ts, conserved site JOS54_RS02240 IPR036393 Acetylglutamate kinase-like superfamily JOS54_RS02240 IPR001048 Aspartate/glutamate/uridylate kinase JOS54_RS02240 IPR015963 Uridylate kinase, bacteria JOS54_RS02240 IPR011817 Uridylate kinase JOS54_RS02245 IPR036191 RRF superfamily JOS54_RS02245 IPR023584 Ribosome recycling factor domain JOS54_RS02245 IPR002661 Ribosome recycling factor JOS54_RS02250 IPR001441 Decaprenyl diphosphate synthase-like JOS54_RS02250 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site JOS54_RS02250 IPR036424 Decaprenyl diphosphate synthase-like superfamily JOS54_RS02255 IPR000374 Phosphatidate cytidylyltransferase JOS54_RS02260 IPR036291 NAD(P)-binding domain superfamily JOS54_RS02260 IPR036169 DXP reductoisomerase, C-terminal domain superfamily JOS54_RS02260 IPR026877 DXP reductoisomerase C-terminal domain JOS54_RS02260 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal JOS54_RS02260 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal JOS54_RS02260 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase JOS54_RS02265 IPR001478 PDZ domain JOS54_RS02265 IPR041489 PDZ domain 6 JOS54_RS02265 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase JOS54_RS02265 IPR008915 Peptidase M50 JOS54_RS02265 IPR036034 PDZ superfamily JOS54_RS02280 IPR005945 Proline-specific peptidase JOS54_RS02280 IPR002410 Peptidase S33 JOS54_RS02280 IPR000073 Alpha/beta hydrolase fold-1 JOS54_RS02280 IPR029058 Alpha/Beta hydrolase fold JOS54_RS02285 IPR020891 Uncharacterised protein family UPF0758, conserved site JOS54_RS02285 IPR001405 Uncharacterised protein family UPF0758 JOS54_RS02285 IPR010994 RuvA domain 2-like JOS54_RS02285 IPR037518 MPN domain JOS54_RS02285 IPR025657 RadC-like JAB domain JOS54_RS02290 IPR002549 Transmembrane protein TqsA-like JOS54_RS02300 IPR018320 DNA polymerase 1 JOS54_RS02300 IPR001098 DNA-directed DNA polymerase, family A, palm domain JOS54_RS02300 IPR020045 DNA polymerase I-like, H3TH domain JOS54_RS02300 IPR002298 DNA polymerase A JOS54_RS02300 IPR036397 Ribonuclease H superfamily JOS54_RS02300 IPR029060 PIN-like domain superfamily JOS54_RS02300 IPR012337 Ribonuclease H-like superfamily JOS54_RS02300 IPR019760 DNA-directed DNA polymerase, family A, conserved site JOS54_RS02300 IPR002421 5'-3' exonuclease, N-terminal JOS54_RS02300 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal JOS54_RS02300 IPR002562 3'-5' exonuclease domain JOS54_RS02300 IPR008918 Helix-hairpin-helix motif, class 2 JOS54_RS02300 IPR036279 5'-3' exonuclease, C-terminal domain superfamily JOS54_RS02305 IPR010663 Zinc finger, FPG/IleRS-type JOS54_RS02305 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site JOS54_RS02305 IPR020629 Formamidopyrimidine-DNA glycosylase JOS54_RS02305 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain JOS54_RS02305 IPR035937 MutM-like, N-terminal JOS54_RS02305 IPR010979 Ribosomal protein S13-like, H2TH JOS54_RS02305 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type JOS54_RS02305 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding JOS54_RS02310 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS02310 IPR001977 Dephospho-CoA kinase JOS54_RS02325 IPR015912 Phosphofructokinase, conserved site JOS54_RS02325 IPR000023 Phosphofructokinase domain JOS54_RS02325 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type JOS54_RS02325 IPR022953 ATP-dependent 6-phosphofructokinase JOS54_RS02325 IPR035966 Phosphofructokinase superfamily JOS54_RS02325 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic JOS54_RS02330 IPR015795 Pyruvate kinase, C-terminal JOS54_RS02330 IPR001697 Pyruvate kinase JOS54_RS02330 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily JOS54_RS02330 IPR040442 Pyruvate kinase-like domain superfamily JOS54_RS02330 IPR011037 Pyruvate kinase-like, insert domain superfamily JOS54_RS02330 IPR018209 Pyruvate kinase, active site JOS54_RS02330 IPR015793 Pyruvate kinase, barrel JOS54_RS02330 IPR036918 Pyruvate kinase, C-terminal domain superfamily JOS54_RS02330 IPR015806 Pyruvate kinase, insert domain superfamily JOS54_RS02330 IPR036637 Phosphohistidine domain superfamily JOS54_RS02330 IPR008279 PEP-utilising enzyme, mobile domain JOS54_RS02340 IPR038750 Uncharacterized protein YczE/YyaS-like JOS54_RS02355 IPR020568 Ribosomal protein S5 domain 2-type fold JOS54_RS02355 IPR020575 Heat shock protein Hsp90, N-terminal JOS54_RS02355 IPR001404 Heat shock protein Hsp90 family JOS54_RS02355 IPR037196 HSP90, C-terminal domain JOS54_RS02355 IPR019805 Heat shock protein Hsp90, conserved site JOS54_RS02355 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JOS54_RS02375 IPR033199 Dimethylarginine dimethylaminohydrolase JOS54_RS02380 IPR022461 Arginine/ornithine antiporter JOS54_RS02380 IPR002293 Amino acid/polyamine transporter I JOS54_RS02380 IPR004754 Amino acid antiporter JOS54_RS02385 IPR001608 Alanine racemase, N-terminal JOS54_RS02385 IPR029066 PLP-binding barrel JOS54_RS02390 IPR033199 Dimethylarginine dimethylaminohydrolase JOS54_RS02395 IPR017853 Glycoside hydrolase superfamily JOS54_RS02395 IPR019948 Gram-positive LPXTG cell wall anchor JOS54_RS02395 IPR019931 LPXTG cell wall anchor domain JOS54_RS02395 IPR005877 YSIRK Gram-positive signal peptide JOS54_RS02395 IPR011098 G5 domain JOS54_RS02395 IPR015883 Glycoside hydrolase family 20, catalytic domain JOS54_RS02415 IPR009061 Putative DNA-binding domain superfamily JOS54_RS02415 IPR011789 Cu(I)-responsive transcriptional regulator JOS54_RS02415 IPR000551 MerR-type HTH domain JOS54_RS02420 IPR030390 RNA methyltransferase TrmA, active site JOS54_RS02420 IPR010280 (Uracil-5)-methyltransferase family JOS54_RS02420 IPR002792 TRAM domain JOS54_RS02420 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JOS54_RS02420 IPR012340 Nucleic acid-binding, OB-fold JOS54_RS02430 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS02430 IPR017871 ABC transporter, conserved site JOS54_RS02430 IPR003439 ABC transporter-like JOS54_RS02430 IPR003593 AAA+ ATPase domain JOS54_RS02435 IPR002229 Blood group Rhesus C/E/D polypeptide JOS54_RS02435 IPR001851 ABC transporter, permease JOS54_RS02440 IPR001851 ABC transporter, permease JOS54_RS02460 IPR001333 Peptidase M32, carboxypeptidase Taq JOS54_RS02465 IPR002052 DNA methylase, N-6 adenine-specific, conserved site JOS54_RS02465 IPR012327 D12 class N6 adenine-specific DNA methyltransferase JOS54_RS02465 IPR012186 Adenine modification methylase, M.StsI-type JOS54_RS02465 IPR023095 Adenine-specific methyltransferase, domain 2 JOS54_RS02465 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JOS54_RS02505 IPR017853 Glycoside hydrolase superfamily JOS54_RS02505 IPR013783 Immunoglobulin-like fold JOS54_RS02505 IPR014756 Immunoglobulin E-set JOS54_RS02505 IPR013780 Glycosyl hydrolase, all-beta JOS54_RS02505 IPR004193 Glycoside hydrolase, family 13, N-terminal JOS54_RS02505 IPR006047 Glycosyl hydrolase, family 13, catalytic domain JOS54_RS02505 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta JOS54_RS02505 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB JOS54_RS02505 IPR037439 1,4-alpha-glucan-branching enzyme JOS54_RS02510 IPR000811 Glycosyl transferase, family 35 JOS54_RS02510 IPR011833 Glycogen/starch/alpha-glucan phosphorylase JOS54_RS02510 IPR035090 Phosphorylase pyridoxal-phosphate attachment site JOS54_RS02515 IPR011004 Trimeric LpxA-like superfamily JOS54_RS02515 IPR011831 Glucose-1-phosphate adenylyltransferase JOS54_RS02515 IPR029044 Nucleotide-diphospho-sugar transferases JOS54_RS02515 IPR005836 ADP-glucose pyrophosphorylase, conserved site JOS54_RS02515 IPR005835 Nucleotidyl transferase domain JOS54_RS02515 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial JOS54_RS02520 IPR029044 Nucleotide-diphospho-sugar transferases JOS54_RS02520 IPR005835 Nucleotidyl transferase domain JOS54_RS02520 IPR011832 Glucose-1-phosphate adenylyltransferase, GlgD subunit JOS54_RS02520 IPR011004 Trimeric LpxA-like superfamily JOS54_RS02525 IPR001296 Glycosyl transferase, family 1 JOS54_RS02525 IPR011835 Bacterial/plant glycogen synthase JOS54_RS02525 IPR013534 Starch synthase, catalytic domain JOS54_RS02530 IPR017853 Glycoside hydrolase superfamily JOS54_RS02530 IPR031319 Alpha-amylase, C-terminal domain JOS54_RS02530 IPR013784 Carbohydrate-binding-like fold JOS54_RS02530 IPR013783 Immunoglobulin-like fold JOS54_RS02530 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain JOS54_RS02530 IPR003961 Fibronectin type III JOS54_RS02530 IPR036116 Fibronectin type III superfamily JOS54_RS02530 IPR014756 Immunoglobulin E-set JOS54_RS02530 IPR006047 Glycosyl hydrolase, family 13, catalytic domain JOS54_RS02530 IPR013780 Glycosyl hydrolase, all-beta JOS54_RS02530 IPR002044 Carbohydrate binding module family 20 JOS54_RS02535 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily JOS54_RS02535 IPR030395 Glycerophosphodiester phosphodiesterase domain JOS54_RS02540 IPR003797 DegV JOS54_RS02555 IPR011640 Ferrous iron transport protein B, C-terminal JOS54_RS02555 IPR007167 Ferrous iron transporter FeoA domain JOS54_RS02555 IPR038157 Ferrous iron transporter, core domain JOS54_RS02555 IPR006073 GTP binding domain JOS54_RS02555 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS02555 IPR041069 FeoB, cytosolic helical domain JOS54_RS02555 IPR005225 Small GTP-binding protein domain JOS54_RS02555 IPR008988 Transcriptional repressor, C-terminal JOS54_RS02555 IPR003373 Ferrous iron transport protein B JOS54_RS02555 IPR030389 FeoB-type guanine nucleotide-binding (G) domain JOS54_RS02555 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain JOS54_RS02560 IPR030854 Ribonuclease J, bacteria JOS54_RS02560 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JOS54_RS02560 IPR004613 Ribonuclease J JOS54_RS02560 IPR001279 Metallo-beta-lactamase JOS54_RS02560 IPR041636 Ribonuclease J, C-terminal JOS54_RS02560 IPR042173 Ribonuclease J, domain 2 JOS54_RS02560 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain JOS54_RS02560 IPR001587 Ribonuclease J, conserved site JOS54_RS02565 IPR023635 Peptide deformylase JOS54_RS02565 IPR036821 Peptide deformylase superfamily JOS54_RS02570 IPR013438 Sporulation stage V, protein E JOS54_RS02570 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site JOS54_RS02570 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA JOS54_RS02570 IPR013437 Probable peptidoglycan glycosyltransferase FtsW JOS54_RS02575 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JOS54_RS02575 IPR004398 RNA methyltransferase, RsmD JOS54_RS02580 IPR004821 Cytidyltransferase-like domain JOS54_RS02580 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JOS54_RS02580 IPR001980 Phosphopantetheine adenylyltransferase JOS54_RS02585 IPR036291 NAD(P)-binding domain superfamily JOS54_RS02585 IPR004104 Oxidoreductase, C-terminal JOS54_RS02585 IPR000683 Oxidoreductase, N-terminal JOS54_RS02600 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS02600 IPR017871 ABC transporter, conserved site JOS54_RS02600 IPR003439 ABC transporter-like JOS54_RS02600 IPR003593 AAA+ ATPase domain JOS54_RS02605 IPR013785 Aldolase-type TIM barrel JOS54_RS02605 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site JOS54_RS02605 IPR013483 Molybdenum cofactor biosynthesis protein A JOS54_RS02605 IPR006638 Elp3/MiaB/NifB JOS54_RS02605 IPR007197 Radical SAM JOS54_RS02605 IPR010505 Molybdenum cofactor synthesis C-terminal JOS54_RS02625 IPR029016 GAF-like domain superfamily JOS54_RS02625 IPR002571 Heat-inducible transcription repressor HrcA JOS54_RS02625 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal JOS54_RS02625 IPR036388 Winged helix-like DNA-binding domain superfamily JOS54_RS02625 IPR036390 Winged helix DNA-binding domain superfamily JOS54_RS02625 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily JOS54_RS02630 IPR013805 GrpE nucleotide exchange factor, coiled-coil JOS54_RS02630 IPR009012 GrpE nucleotide exchange factor, head JOS54_RS02630 IPR000740 GrpE nucleotide exchange factor JOS54_RS02635 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily JOS54_RS02635 IPR012725 Chaperone DnaK JOS54_RS02635 IPR018181 Heat shock protein 70, conserved site JOS54_RS02635 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily JOS54_RS02635 IPR013126 Heat shock protein 70 family JOS54_RS02640 IPR001305 Heat shock protein DnaJ, cysteine-rich domain JOS54_RS02640 IPR036869 Chaperone J-domain superfamily JOS54_RS02640 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily JOS54_RS02640 IPR012724 Chaperone DnaJ JOS54_RS02640 IPR002939 Chaperone DnaJ, C-terminal JOS54_RS02640 IPR018253 DnaJ domain, conserved site JOS54_RS02640 IPR008971 HSP40/DnaJ peptide-binding JOS54_RS02640 IPR001623 DnaJ domain JOS54_RS02645 IPR018368 ClpA/B, conserved site 1 JOS54_RS02645 IPR028299 ClpA/B, conserved site 2 JOS54_RS02645 IPR004176 Clp, N-terminal JOS54_RS02645 IPR036628 Clp, N-terminal domain superfamily JOS54_RS02645 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS02645 IPR041546 ClpA/ClpB, AAA lid domain JOS54_RS02645 IPR019489 Clp ATPase, C-terminal JOS54_RS02645 IPR017730 Chaperonin ClpB JOS54_RS02645 IPR001270 ClpA/B family JOS54_RS02645 IPR003593 AAA+ ATPase domain JOS54_RS02645 IPR003959 ATPase, AAA-type, core JOS54_RS02665 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase JOS54_RS02665 IPR013785 Aldolase-type TIM barrel JOS54_RS02665 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal JOS54_RS02665 IPR041619 Nicotinate phosphoribosyltransferase C-terminal domain JOS54_RS02665 IPR007229 Nicotinate phosphoribosyltransferase family JOS54_RS02665 IPR006405 Nicotinate phosphoribosyltransferase pncB-type JOS54_RS02665 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain JOS54_RS02675 IPR003010 Carbon-nitrogen hydrolase JOS54_RS02675 IPR036526 Carbon-nitrogen hydrolase superfamily JOS54_RS02675 IPR014445 Glutamine-dependent NAD(+) synthetase JOS54_RS02675 IPR041856 Glutamine-dependent NAD+ synthetase, C-terminal JOS54_RS02675 IPR003694 NAD(+) synthetase JOS54_RS02675 IPR022310 NAD/GMP synthase JOS54_RS02675 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JOS54_RS02680 IPR006043 Xanthine/uracil/vitamin C permease JOS54_RS02680 IPR006042 Xanthine/uracil permease JOS54_RS02680 IPR029935 Uracil permease JOS54_RS02690 IPR003593 AAA+ ATPase domain JOS54_RS02690 IPR011527 ABC transporter type 1, transmembrane domain JOS54_RS02690 IPR036640 ABC transporter type 1, transmembrane domain superfamily JOS54_RS02690 IPR003439 ABC transporter-like JOS54_RS02690 IPR017871 ABC transporter, conserved site JOS54_RS02690 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS02690 IPR005897 Peptidase C39, ABC-type bacteriocin transporter JOS54_RS02690 IPR039421 Type I protein exporter JOS54_RS02690 IPR005074 Peptidase C39, bacteriocin processing JOS54_RS02720 IPR003593 AAA+ ATPase domain JOS54_RS02720 IPR003439 ABC transporter-like JOS54_RS02720 IPR017871 ABC transporter, conserved site JOS54_RS02720 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS02740 IPR036640 ABC transporter type 1, transmembrane domain superfamily JOS54_RS02740 IPR013113 FAD-binding 9, siderophore-interacting JOS54_RS02740 IPR003439 ABC transporter-like JOS54_RS02740 IPR003593 AAA+ ATPase domain JOS54_RS02740 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JOS54_RS02740 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS02740 IPR017938 Riboflavin synthase-like beta-barrel JOS54_RS02740 IPR007037 Siderophore-interacting protein, C-terminal domain JOS54_RS02740 IPR017927 FAD-binding domain, ferredoxin reductase-type JOS54_RS02740 IPR011527 ABC transporter type 1, transmembrane domain JOS54_RS02740 IPR017871 ABC transporter, conserved site JOS54_RS02745 IPR039421 Type I protein exporter JOS54_RS02745 IPR003593 AAA+ ATPase domain JOS54_RS02745 IPR011527 ABC transporter type 1, transmembrane domain JOS54_RS02745 IPR036640 ABC transporter type 1, transmembrane domain superfamily JOS54_RS02745 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS02745 IPR011917 ABC transporter, lipid A export, MsbA JOS54_RS02745 IPR003439 ABC transporter-like JOS54_RS02745 IPR017871 ABC transporter, conserved site JOS54_RS02755 IPR007197 Radical SAM JOS54_RS02755 IPR032432 Radical SAM, C-terminal extension JOS54_RS02755 IPR006638 Elp3/MiaB/NifB JOS54_RS02755 IPR039661 ELP3/YhcC JOS54_RS02755 IPR023404 Radical SAM, alpha/beta horseshoe JOS54_RS02755 IPR005911 Protein YhcC-like JOS54_RS02760 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA JOS54_RS02760 IPR018211 Alcohol dehydrogenase, iron-type, conserved site JOS54_RS02760 IPR039697 Iron-type alcohol dehydrogenase-like JOS54_RS02765 IPR013785 Aldolase-type TIM barrel JOS54_RS02765 IPR000741 Fructose-bisphosphate aldolase, class-I JOS54_RS02765 IPR023014 Fructose-bisphosphate aldolase class I, Gram positive bacteria-type JOS54_RS02770 IPR036565 Mur-like, catalytic domain superfamily JOS54_RS02770 IPR004101 Mur ligase, C-terminal JOS54_RS02770 IPR013221 Mur ligase, central JOS54_RS02770 IPR036615 Mur ligase, C-terminal domain superfamily JOS54_RS02770 IPR000713 Mur ligase, N-terminal catalytic domain JOS54_RS02770 IPR005758 UDP-N-acetylmuramate--L-alanine ligase JOS54_RS02785 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS02785 IPR017871 ABC transporter, conserved site JOS54_RS02785 IPR003439 ABC transporter-like JOS54_RS02785 IPR003593 AAA+ ATPase domain JOS54_RS02790 IPR026898 Intramembrane metalloprotease PrsW JOS54_RS02790 IPR023596 Peptidase PrsW, archaeal/bacterial JOS54_RS02795 IPR015424 Pyridoxal phosphate-dependent transferase JOS54_RS02795 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JOS54_RS02795 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JOS54_RS02795 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB JOS54_RS02795 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase JOS54_RS02800 IPR003362 Bacterial sugar transferase JOS54_RS02800 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase JOS54_RS02800 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ JOS54_RS02805 IPR036291 NAD(P)-binding domain superfamily JOS54_RS02805 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JOS54_RS02805 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain JOS54_RS02810 IPR007074 LicD family JOS54_RS02815 IPR007074 LicD family JOS54_RS02820 IPR031356 Stealth protein CR4, conserved region 4 JOS54_RS02820 IPR021520 Stealth protein CR2, conserved region 2 JOS54_RS02820 IPR031358 Stealth protein CR1, conserved region 1 JOS54_RS02840 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase JOS54_RS02840 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JOS54_RS02840 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JOS54_RS02840 IPR015424 Pyridoxal phosphate-dependent transferase JOS54_RS02840 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site JOS54_RS02840 IPR000192 Aminotransferase class V domain JOS54_RS02845 IPR004821 Cytidyltransferase-like domain JOS54_RS02845 IPR006409 Glycerol-3-phosphate cytidylyltransferase JOS54_RS02845 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JOS54_RS02855 IPR004474 Cell envelope-related transcriptional attenuator domain JOS54_RS02855 IPR023734 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU JOS54_RS02870 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA JOS54_RS02870 IPR018211 Alcohol dehydrogenase, iron-type, conserved site JOS54_RS02875 IPR020633 Thymidine kinase, conserved site JOS54_RS02875 IPR001267 Thymidine kinase JOS54_RS02875 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS02880 IPR002528 Multi antimicrobial extrusion protein JOS54_RS02885 IPR014999 Uncharacterised protein family UPF0371 JOS54_RS02890 IPR001567 Peptidase M3A/M3B catalytic domain JOS54_RS02890 IPR004438 Peptidase M3B, oligoendopeptidase F JOS54_RS02890 IPR042088 Oligoendopeptidase F, C-terminal domain JOS54_RS02890 IPR013647 Oligopeptidase F, N-terminal domain JOS54_RS02895 IPR002549 Transmembrane protein TqsA-like JOS54_RS02900 IPR000889 Glutathione peroxidase JOS54_RS02900 IPR029759 Glutathione peroxidase active site JOS54_RS02900 IPR029760 Glutathione peroxidase conserved site JOS54_RS02900 IPR036249 Thioredoxin-like superfamily JOS54_RS02910 IPR036986 RNA-binding S4 domain superfamily JOS54_RS02910 IPR002942 RNA-binding S4 domain JOS54_RS02910 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site JOS54_RS02910 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F JOS54_RS02910 IPR006145 Pseudouridine synthase, RsuA/RluA JOS54_RS02910 IPR020103 Pseudouridine synthase, catalytic domain superfamily JOS54_RS02910 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain JOS54_RS02915 IPR008532 NFACT, RNA-binding domain JOS54_RS02920 IPR017911 ABC transporter, macrolide export, ATP-binding domain JOS54_RS02920 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS02920 IPR017871 ABC transporter, conserved site JOS54_RS02920 IPR025857 MacB-like periplasmic core domain JOS54_RS02920 IPR003838 ABC transporter permease protein domain JOS54_RS02920 IPR003593 AAA+ ATPase domain JOS54_RS02920 IPR003439 ABC transporter-like JOS54_RS02925 IPR008145 Guanylate kinase/L-type calcium channel beta subunit JOS54_RS02925 IPR008144 Guanylate kinase-like domain JOS54_RS02925 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS02925 IPR020590 Guanylate kinase, conserved site JOS54_RS02925 IPR017665 Guanylate kinase JOS54_RS02930 IPR021144 Uncharacterised protein family UPF0597 JOS54_RS02930 IPR005130 Serine dehydratase-like, alpha subunit JOS54_RS02935 IPR005709 Ribosomal protein S4, bacterial-type JOS54_RS02935 IPR018079 Ribosomal protein S4, conserved site JOS54_RS02935 IPR002942 RNA-binding S4 domain JOS54_RS02935 IPR036986 RNA-binding S4 domain superfamily JOS54_RS02935 IPR001912 Ribosomal protein S4/S9, N-terminal JOS54_RS02935 IPR022801 Ribosomal protein S4/S9 JOS54_RS02940 IPR010379 Septation ring formation regulator EzrA JOS54_RS02945 IPR015424 Pyridoxal phosphate-dependent transferase JOS54_RS02945 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JOS54_RS02945 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JOS54_RS02945 IPR016454 Cysteine desulfurase JOS54_RS02945 IPR000192 Aminotransferase class V domain JOS54_RS02950 IPR004114 THUMP domain JOS54_RS02950 IPR020536 Thil, AANH domain JOS54_RS02950 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JOS54_RS02950 IPR003720 tRNA sulfurtransferase ThiI JOS54_RS02960 IPR005982 Thioredoxin reductase JOS54_RS02960 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site JOS54_RS02960 IPR036188 FAD/NAD(P)-binding domain superfamily JOS54_RS02960 IPR023753 FAD/NAD(P)-binding domain JOS54_RS02965 IPR036164 L21-like superfamily JOS54_RS02965 IPR001787 Ribosomal protein L21 JOS54_RS02965 IPR018258 Ribosomal protein L21, conserved site JOS54_RS02965 IPR028909 Ribosomal protein L21-like JOS54_RS02970 IPR036764 Cysteine protease Prp superfamily JOS54_RS02970 IPR007422 Cysteine protease Prp JOS54_RS02975 IPR018261 Ribosomal protein L27, conserved site JOS54_RS02975 IPR001684 Ribosomal protein L27 JOS54_RS02980 IPR006074 GTP1/OBG, conserved site JOS54_RS02980 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily JOS54_RS02980 IPR006169 GTP1/OBG domain JOS54_RS02980 IPR036726 GTP1/OBG domain superfamily JOS54_RS02980 IPR014100 GTP-binding protein Obg/CgtA JOS54_RS02980 IPR035101 GTP-binding protein, Obg-type JOS54_RS02980 IPR031167 OBG-type guanine nucleotide-binding (G) domain JOS54_RS02980 IPR015349 GTP-binding protein OBG, C-terminal JOS54_RS02980 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS02980 IPR006073 GTP binding domain JOS54_RS02980 IPR005225 Small GTP-binding protein domain JOS54_RS02985 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial JOS54_RS02985 IPR036267 RuvA, C-terminal domain superfamily JOS54_RS02985 IPR011114 Holliday junction DNA helicase RuvA, C-terminal JOS54_RS02985 IPR010994 RuvA domain 2-like JOS54_RS02985 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 JOS54_RS02985 IPR012340 Nucleic acid-binding, OB-fold JOS54_RS02985 IPR000085 Bacterial DNA recombination protein RuvA JOS54_RS02990 IPR036390 Winged helix DNA-binding domain superfamily JOS54_RS02990 IPR036388 Winged helix-like DNA-binding domain superfamily JOS54_RS02990 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS02990 IPR008823 RuvB C-terminal winged helix domain JOS54_RS02990 IPR008824 RuvB-like P-loop domain JOS54_RS02990 IPR004605 DNA helicase, Holliday junction RuvB-type JOS54_RS02990 IPR041445 RuvB, AAA lid domain JOS54_RS02990 IPR003593 AAA+ ATPase domain JOS54_RS03005 IPR003439 ABC transporter-like JOS54_RS03005 IPR017871 ABC transporter, conserved site JOS54_RS03005 IPR011917 ABC transporter, lipid A export, MsbA JOS54_RS03005 IPR039421 Type I protein exporter JOS54_RS03005 IPR003593 AAA+ ATPase domain JOS54_RS03005 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS03005 IPR036640 ABC transporter type 1, transmembrane domain superfamily JOS54_RS03005 IPR011527 ABC transporter type 1, transmembrane domain JOS54_RS03010 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JOS54_RS03010 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JOS54_RS03010 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm JOS54_RS03010 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding JOS54_RS03010 IPR002300 Aminoacyl-tRNA synthetase, class Ia JOS54_RS03010 IPR033705 Valyl tRNA synthetase, anticodon-binding domain JOS54_RS03010 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily JOS54_RS03010 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm JOS54_RS03010 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain JOS54_RS03010 IPR002303 Valine-tRNA ligase JOS54_RS03010 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding JOS54_RS03015 IPR013815 ATP-grasp fold, subdomain 1 JOS54_RS03015 IPR008279 PEP-utilising enzyme, mobile domain JOS54_RS03015 IPR018274 PEP-utilising enzyme, active site JOS54_RS03015 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding JOS54_RS03015 IPR023151 PEP-utilising enzyme, conserved site JOS54_RS03015 IPR036637 Phosphohistidine domain superfamily JOS54_RS03015 IPR010121 Pyruvate, phosphate dikinase JOS54_RS03015 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily JOS54_RS03015 IPR000121 PEP-utilising enzyme, C-terminal JOS54_RS03015 IPR040442 Pyruvate kinase-like domain superfamily JOS54_RS03020 IPR002583 Ribosomal protein S20 JOS54_RS03020 IPR036510 Ribosomal protein S20 superfamily JOS54_RS03025 IPR005794 Methionyl-tRNA formyltransferase JOS54_RS03025 IPR005793 Formyl transferase, C-terminal JOS54_RS03025 IPR011034 Formyl transferase-like, C-terminal domain superfamily JOS54_RS03025 IPR036477 Formyl transferase, N-terminal domain superfamily JOS54_RS03025 IPR001555 Phosphoribosylglycinamide formyltransferase, active site JOS54_RS03025 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain JOS54_RS03025 IPR002376 Formyl transferase, N-terminal JOS54_RS03025 IPR037022 Formyl transferase, C-terminal domain superfamily JOS54_RS03030 IPR000795 Transcription factor, GTP-binding domain JOS54_RS03030 IPR006297 Elongation factor 4 JOS54_RS03030 IPR035647 EF-G domain III/V-like JOS54_RS03030 IPR000640 Elongation factor EFG, domain V-like JOS54_RS03030 IPR009000 Translation protein, beta-barrel domain superfamily JOS54_RS03030 IPR005225 Small GTP-binding protein domain JOS54_RS03030 IPR031157 Tr-type G domain, conserved site JOS54_RS03030 IPR038363 LepA, C-terminal domain superfamily JOS54_RS03030 IPR013842 GTP-binding protein LepA, C-terminal JOS54_RS03030 IPR035654 Elongation factor 4, domain IV JOS54_RS03030 IPR004161 Translation elongation factor EFTu-like, domain 2 JOS54_RS03030 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS03035 IPR034505 Anaerobic coproporphyrinogen-III oxidase JOS54_RS03035 IPR023404 Radical SAM, alpha/beta horseshoe JOS54_RS03035 IPR004559 Heme chaperone HemW-like JOS54_RS03035 IPR010723 HemN, C-terminal JOS54_RS03035 IPR006638 Elp3/MiaB/NifB JOS54_RS03035 IPR007197 Radical SAM JOS54_RS03040 IPR009068 S15/NS1, RNA-binding JOS54_RS03040 IPR005290 Ribosomal protein S15, bacterial-type JOS54_RS03040 IPR000589 Ribosomal protein S15 JOS54_RS03045 IPR003593 AAA+ ATPase domain JOS54_RS03045 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS03045 IPR017871 ABC transporter, conserved site JOS54_RS03045 IPR003439 ABC transporter-like JOS54_RS03065 IPR003029 S1 domain JOS54_RS03065 IPR022967 RNA-binding domain, S1 JOS54_RS03065 IPR004088 K Homology domain, type 1 JOS54_RS03065 IPR001247 Exoribonuclease, phosphorolytic domain 1 JOS54_RS03065 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily JOS54_RS03065 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain JOS54_RS03065 IPR012162 Polyribonucleotide nucleotidyltransferase JOS54_RS03065 IPR004087 K Homology domain JOS54_RS03065 IPR027408 PNPase/RNase PH domain superfamily JOS54_RS03065 IPR012340 Nucleic acid-binding, OB-fold JOS54_RS03065 IPR020568 Ribosomal protein S5 domain 2-type fold JOS54_RS03065 IPR036612 K Homology domain, type 1 superfamily JOS54_RS03065 IPR036345 Exoribonuclease, PH domain 2 superfamily JOS54_RS03065 IPR015847 Exoribonuclease, phosphorolytic domain 2 JOS54_RS03070 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type JOS54_RS03070 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JOS54_RS03095 IPR000843 LacI-type HTH domain JOS54_RS03095 IPR028082 Periplasmic binding protein-like I JOS54_RS03095 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JOS54_RS03095 IPR006377 Catabolite control protein A JOS54_RS03100 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JOS54_RS03100 IPR024088 Tyrosine-tRNA ligase, bacterial-type JOS54_RS03100 IPR002305 Aminoacyl-tRNA synthetase, class Ic JOS54_RS03100 IPR036986 RNA-binding S4 domain superfamily JOS54_RS03100 IPR002942 RNA-binding S4 domain JOS54_RS03100 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 JOS54_RS03100 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JOS54_RS03100 IPR002307 Tyrosine-tRNA ligase JOS54_RS03110 IPR035956 RimP, N-terminal domain superfamily JOS54_RS03110 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily JOS54_RS03110 IPR028998 Ribosome maturation factor RimP, C-terminal JOS54_RS03110 IPR003728 Ribosome maturation factor RimP JOS54_RS03110 IPR028989 Ribosome maturation factor RimP, N-terminal JOS54_RS03115 IPR004087 K Homology domain JOS54_RS03115 IPR036555 NusA, N-terminal domain superfamily JOS54_RS03115 IPR025249 KH domain, NusA-like JOS54_RS03115 IPR009019 K homology domain superfamily, prokaryotic type JOS54_RS03115 IPR012340 Nucleic acid-binding, OB-fold JOS54_RS03115 IPR030842 Transcription termination/antitermination protein NusA, bacterial JOS54_RS03115 IPR022967 RNA-binding domain, S1 JOS54_RS03115 IPR015946 K homology domain-like, alpha/beta JOS54_RS03115 IPR003029 S1 domain JOS54_RS03115 IPR013735 Transcription factor NusA, N-terminal JOS54_RS03115 IPR010213 Transcription termination factor NusA JOS54_RS03120 IPR037465 Uncharacterized protein YlxR JOS54_RS03120 IPR007393 Domain of unknown function DUF448 JOS54_RS03120 IPR035931 YlxR-like superfamily JOS54_RS03125 IPR015760 Translation initiation factor IF- 2 JOS54_RS03125 IPR000178 Translation initiation factor aIF-2, bacterial-like JOS54_RS03125 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS03125 IPR005225 Small GTP-binding protein domain JOS54_RS03125 IPR000795 Transcription factor, GTP-binding domain JOS54_RS03125 IPR023115 Translation initiation factor IF- 2, domain 3 JOS54_RS03125 IPR006847 Translation initiation factor IF-2, N-terminal JOS54_RS03125 IPR009000 Translation protein, beta-barrel domain superfamily JOS54_RS03125 IPR036925 Translation initiation factor IF-2, domain 3 superfamily JOS54_RS03130 IPR000238 Ribosome-binding factor A JOS54_RS03130 IPR015946 K homology domain-like, alpha/beta JOS54_RS03130 IPR020053 Ribosome-binding factor A, conserved site JOS54_RS03130 IPR023799 Ribosome-binding factor A domain superfamily JOS54_RS03135 IPR008966 Adhesion domain superfamily JOS54_RS03135 IPR019931 LPXTG cell wall anchor domain JOS54_RS03135 IPR013783 Immunoglobulin-like fold JOS54_RS03135 IPR008454 Collagen-binding surface protein Cna-like, B-type domain JOS54_RS03135 IPR008456 Collagen binding domain JOS54_RS03135 IPR041033 Prealbumin-like fold domain JOS54_RS03135 IPR011252 Fibrogen-binding domain 1 JOS54_RS03160 IPR023839 Firmicutes EssC, C-terminal JOS54_RS03160 IPR022206 Firmicutes EssC, N-terminal JOS54_RS03160 IPR002543 FtsK domain JOS54_RS03160 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS03160 IPR008984 SMAD/FHA domain superfamily JOS54_RS03170 IPR032819 tRNA pseudouridylate synthase B, C-terminal JOS54_RS03170 IPR014780 tRNA pseudouridine synthase II, TruB JOS54_RS03170 IPR002501 Pseudouridine synthase II, N-terminal JOS54_RS03170 IPR020103 Pseudouridine synthase, catalytic domain superfamily JOS54_RS03175 IPR004821 Cytidyltransferase-like domain JOS54_RS03175 IPR015864 FAD synthetase JOS54_RS03175 IPR023468 Riboflavin kinase JOS54_RS03175 IPR002606 Riboflavin kinase, bacterial JOS54_RS03175 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic JOS54_RS03175 IPR023465 Riboflavin kinase domain superfamily JOS54_RS03175 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JOS54_RS03180 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain JOS54_RS03180 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal JOS54_RS03180 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site JOS54_RS03180 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JOS54_RS03180 IPR023545 rRNA small subunit methyltransferase F JOS54_RS03180 IPR023267 RNA (C5-cytosine) methyltransferase JOS54_RS03180 IPR011023 Nop2p JOS54_RS03180 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type JOS54_RS03195 IPR019815 Translation initiation factor 3, C-terminal JOS54_RS03195 IPR019814 Translation initiation factor 3, N-terminal JOS54_RS03195 IPR001288 Translation initiation factor 3 JOS54_RS03195 IPR019813 Translation initiation factor 3, conserved site JOS54_RS03195 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily JOS54_RS03195 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily JOS54_RS03200 IPR021137 Ribosomal protein L35 JOS54_RS03200 IPR001706 Ribosomal protein L35, non-mitochondrial JOS54_RS03200 IPR018265 Ribosomal protein L35, conserved site JOS54_RS03200 IPR037229 Ribosomal protein L35 superfamily JOS54_RS03205 IPR005813 Ribosomal protein L20 JOS54_RS03205 IPR035566 Ribosomal protein L20, C-terminal JOS54_RS03225 IPR005322 Peptidase C69, dipeptidase A JOS54_RS03230 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS03230 IPR031314 Deoxynucleoside kinase domain JOS54_RS03230 IPR002624 Deoxynucleoside kinase JOS54_RS03235 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JOS54_RS03235 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain JOS54_RS03235 IPR033910 Glutamyl-tRNA synthetase JOS54_RS03235 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JOS54_RS03235 IPR000924 Glutamyl/glutaminyl-tRNA synthetase JOS54_RS03235 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial JOS54_RS03235 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 JOS54_RS03235 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding JOS54_RS03245 IPR029001 Inosine triphosphate pyrophosphatase-like JOS54_RS03245 IPR002637 Ham1-like protein JOS54_RS03245 IPR020922 dITP/XTP pyrophosphatase JOS54_RS03255 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase JOS54_RS03255 IPR001537 tRNA/rRNA methyltransferase, SpoU type JOS54_RS03255 IPR029028 Alpha/beta knot methyltransferases JOS54_RS03255 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JOS54_RS03270 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JOS54_RS03270 IPR024109 Tryptophan-tRNA ligase, bacterial-type JOS54_RS03270 IPR002306 Tryptophan-tRNA ligase JOS54_RS03270 IPR002305 Aminoacyl-tRNA synthetase, class Ic JOS54_RS03270 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JOS54_RS03275 IPR006504 Transcriptional regulator Spx/MgsR JOS54_RS03275 IPR023731 Regulatory protein Spx JOS54_RS03275 IPR006660 Arsenate reductase-like JOS54_RS03275 IPR036249 Thioredoxin-like superfamily JOS54_RS03280 IPR004506 tRNA-specific 2-thiouridylase JOS54_RS03280 IPR023382 Adenine nucleotide alpha hydrolase-like domains JOS54_RS03280 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JOS54_RS03285 IPR003593 AAA+ ATPase domain JOS54_RS03285 IPR027785 UvrD-like helicase C-terminal domain JOS54_RS03285 IPR029493 RecD helicase-like helix-hairpin-helix domain JOS54_RS03285 IPR006345 RecD-like DNA helicase JOS54_RS03285 IPR041451 RecD-like DNA helicase, SH3 domain JOS54_RS03285 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS03290 IPR012947 Threonyl/alanyl tRNA synthetase, SAD JOS54_RS03290 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily JOS54_RS03290 IPR009000 Translation protein, beta-barrel domain superfamily JOS54_RS03290 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily JOS54_RS03290 IPR003156 DHHA1 domain JOS54_RS03290 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria JOS54_RS03290 IPR002318 Alanine-tRNA ligase, class IIc JOS54_RS03290 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain JOS54_RS03290 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal JOS54_RS03295 IPR009309 IreB regulatory phosphoprotein JOS54_RS03300 IPR006641 YqgF/RNase H-like domain JOS54_RS03300 IPR005227 Putative pre-16S rRNA nuclease JOS54_RS03300 IPR012337 Ribonuclease H-like superfamily JOS54_RS03300 IPR037027 YqgF/RNase H-like domain superfamily JOS54_RS03310 IPR003770 Endolytic murein transglycosylase JOS54_RS03315 IPR015797 NUDIX hydrolase-like domain superfamily JOS54_RS03315 IPR020476 NUDIX hydrolase JOS54_RS03315 IPR020084 NUDIX hydrolase, conserved site JOS54_RS03315 IPR000086 NUDIX hydrolase domain JOS54_RS03315 IPR003562 Mutator MutX protein JOS54_RS03320 IPR000764 Uridine kinase-like JOS54_RS03320 IPR026008 Uridine kinase JOS54_RS03320 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS03320 IPR006083 Phosphoribulokinase/uridine kinase JOS54_RS03325 IPR006359 Transcription elongation factor GreA JOS54_RS03325 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily JOS54_RS03325 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal JOS54_RS03325 IPR018151 Transcription elongation factor, GreA/GreB, conserved site JOS54_RS03325 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily JOS54_RS03325 IPR023459 Transcription elongation factor GreA/GreB family JOS54_RS03325 IPR028624 Transcription elongation factor GreA/GreB JOS54_RS03325 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal JOS54_RS03345 IPR005131 Serine dehydratase beta chain JOS54_RS03345 IPR005130 Serine dehydratase-like, alpha subunit JOS54_RS03345 IPR029009 Allosteric substrate binding domain superfamily JOS54_RS03345 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form JOS54_RS03350 IPR001539 Peptidase U32 JOS54_RS03350 IPR032525 Peptidase family U32, C-terminal JOS54_RS03355 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L JOS54_RS03355 IPR001185 Large-conductance mechanosensitive channel JOS54_RS03355 IPR019823 Large-conductance mechanosensitive channel, conserved site JOS54_RS03355 IPR036019 Gated mechanosensitive channel JOS54_RS03395 IPR003395 RecF/RecN/SMC, N-terminal JOS54_RS03395 IPR036277 SMCs flexible hinge superfamily JOS54_RS03395 IPR010935 SMCs flexible hinge JOS54_RS03395 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS03395 IPR011890 Structural maintenance of chromosomes protein, prokaryotic JOS54_RS03395 IPR024704 Structural maintenance of chromosomes protein JOS54_RS03400 IPR036225 SRP/SRP receptor, N-terminal JOS54_RS03400 IPR004390 Signal-recognition particle receptor FtsY JOS54_RS03400 IPR013822 Signal recognition particle SRP54, helical bundle JOS54_RS03400 IPR003593 AAA+ ATPase domain JOS54_RS03400 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS03400 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain JOS54_RS03400 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily JOS54_RS03405 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like JOS54_RS03405 IPR013324 RNA polymerase sigma factor, region 3/4-like JOS54_RS03405 IPR036388 Winged helix-like DNA-binding domain superfamily JOS54_RS03410 IPR000890 Aliphatic acid kinase, short-chain JOS54_RS03410 IPR023865 Aliphatic acid kinase, short-chain, conserved site JOS54_RS03410 IPR004372 Acetate/propionate kinase JOS54_RS03415 IPR001667 DDH domain JOS54_RS03415 IPR003156 DHHA1 domain JOS54_RS03415 IPR038763 DHH phosphoesterase superfamily JOS54_RS03420 IPR003593 AAA+ ATPase domain JOS54_RS03420 IPR003439 ABC transporter-like JOS54_RS03420 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS03430 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS03430 IPR014001 Helicase superfamily 1/2, ATP-binding domain JOS54_RS03430 IPR014014 RNA helicase, DEAD-box type, Q motif JOS54_RS03430 IPR028622 ATP-dependent RNA helicase RhlE JOS54_RS03430 IPR001650 Helicase, C-terminal JOS54_RS03430 IPR011545 DEAD/DEAH box helicase domain JOS54_RS03430 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site JOS54_RS03435 IPR000795 Transcription factor, GTP-binding domain JOS54_RS03435 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS03435 IPR009000 Translation protein, beta-barrel domain superfamily JOS54_RS03435 IPR005517 Translation elongation factor EFG/EF2, domain IV JOS54_RS03435 IPR035647 EF-G domain III/V-like JOS54_RS03435 IPR000640 Elongation factor EFG, domain V-like JOS54_RS03435 IPR031157 Tr-type G domain, conserved site JOS54_RS03435 IPR035650 Tetracycline resistance protein, C-terminal JOS54_RS03435 IPR005225 Small GTP-binding protein domain JOS54_RS03435 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JOS54_RS03435 IPR041095 Elongation Factor G, domain II JOS54_RS03435 IPR020568 Ribosomal protein S5 domain 2-type fold JOS54_RS03455 IPR038200 GW domain superfamily JOS54_RS03455 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily JOS54_RS03455 IPR002502 N-acetylmuramoyl-L-alanine amidase domain JOS54_RS03455 IPR025987 GW domain JOS54_RS03455 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain JOS54_RS03470 IPR003797 DegV JOS54_RS03500 IPR011010 DNA breaking-rejoining enzyme, catalytic core JOS54_RS03500 IPR023009 Tyrosine recombinase XerC/XerD JOS54_RS03500 IPR013762 Integrase-like, catalytic domain superfamily JOS54_RS03500 IPR004107 Integrase, SAM-like, N-terminal JOS54_RS03500 IPR010998 Integrase/recombinase, N-terminal JOS54_RS03500 IPR002104 Integrase, catalytic domain JOS54_RS03500 IPR011932 Tyrosine recombinase XerD JOS54_RS03505 IPR001126 UmuC domain JOS54_RS03505 IPR024728 DNA polymerase type-Y, HhH motif JOS54_RS03505 IPR022880 DNA polymerase IV JOS54_RS03505 IPR017961 DNA polymerase, Y-family, little finger domain JOS54_RS03505 IPR036775 DNA polymerase, Y-family, little finger domain superfamily JOS54_RS03510 IPR004604 DNA recombination/repair protein RecN JOS54_RS03510 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS03510 IPR038729 Rad50/SbcC-type AAA domain JOS54_RS03515 IPR005474 Transketolase, N-terminal JOS54_RS03515 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II JOS54_RS03515 IPR029061 Thiamin diphosphate-binding fold JOS54_RS03515 IPR005477 Deoxyxylulose-5-phosphate synthase JOS54_RS03515 IPR033248 Transketolase, C-terminal domain JOS54_RS03515 IPR020826 Transketolase binding site JOS54_RS03515 IPR005475 Transketolase-like, pyrimidine-binding domain JOS54_RS03520 IPR008949 Isoprenoid synthase domain superfamily JOS54_RS03520 IPR033749 Polyprenyl synthetase, conserved site JOS54_RS03520 IPR000092 Polyprenyl synthetase JOS54_RS03530 IPR025824 OB-fold nucleic acid binding domain JOS54_RS03530 IPR003753 Exonuclease VII, large subunit JOS54_RS03530 IPR020579 Exonuclease VII, large subunit, C-terminal JOS54_RS03535 IPR006027 NusB/RsmB/TIM44 JOS54_RS03535 IPR011605 NusB antitermination factor JOS54_RS03535 IPR035926 NusB-like superfamily JOS54_RS03540 IPR001093 IMP dehydrogenase/GMP reductase JOS54_RS03540 IPR015875 IMP dehydrogenase / GMP reductase, conserved site JOS54_RS03540 IPR013785 Aldolase-type TIM barrel JOS54_RS03540 IPR000644 CBS domain JOS54_RS03540 IPR005990 Inosine-5'-monophosphate dehydrogenase JOS54_RS03545 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 JOS54_RS03545 IPR004154 Anticodon-binding JOS54_RS03545 IPR006195 Aminoacyl-tRNA synthetase, class II JOS54_RS03545 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) JOS54_RS03545 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain JOS54_RS03545 IPR002316 Proline-tRNA ligase, class IIa JOS54_RS03545 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily JOS54_RS03545 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type JOS54_RS03545 IPR033730 Prokaryote proline-tRNA ligase core domain JOS54_RS03545 IPR036621 Anticodon-binding domain superfamily JOS54_RS03555 IPR004095 TGS JOS54_RS03555 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) JOS54_RS03555 IPR033728 Threonine-tRNA ligase catalytic core domain JOS54_RS03555 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily JOS54_RS03555 IPR006195 Aminoacyl-tRNA synthetase, class II JOS54_RS03555 IPR004154 Anticodon-binding JOS54_RS03555 IPR036621 Anticodon-binding domain superfamily JOS54_RS03555 IPR012675 Beta-grasp domain superfamily JOS54_RS03555 IPR002320 Threonine-tRNA ligase, class IIa JOS54_RS03555 IPR012947 Threonyl/alanyl tRNA synthetase, SAD JOS54_RS03555 IPR012676 TGS-like JOS54_RS03560 IPR012337 Ribonuclease H-like superfamily JOS54_RS03560 IPR036397 Ribonuclease H superfamily JOS54_RS03560 IPR003141 Polymerase/histidinol phosphatase, N-terminal JOS54_RS03560 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain JOS54_RS03560 IPR029460 DNA polymerase, helix-hairpin-helix motif JOS54_RS03560 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type JOS54_RS03560 IPR012340 Nucleic acid-binding, OB-fold JOS54_RS03560 IPR040982 DNA polymerase III alpha subunit finger domain JOS54_RS03560 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain JOS54_RS03560 IPR024754 DNA polymerase III polC-like, N-terminal domain II JOS54_RS03560 IPR004013 PHP domain JOS54_RS03560 IPR028112 DNA polymerase III polC-type, N-terminal domain I JOS54_RS03560 IPR013520 Exonuclease, RNase T/DNA polymerase III JOS54_RS03565 IPR033186 Helicase HerA-like C-terminal JOS54_RS03565 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS03570 IPR014720 Double-stranded RNA-binding domain JOS54_RS03570 IPR011907 Ribonuclease III JOS54_RS03570 IPR000999 Ribonuclease III domain JOS54_RS03570 IPR036389 Ribonuclease III, endonuclease domain superfamily JOS54_RS03575 IPR014001 Helicase superfamily 1/2, ATP-binding domain JOS54_RS03575 IPR004609 ATP-dependent DNA helicase RecG JOS54_RS03575 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS03575 IPR012340 Nucleic acid-binding, OB-fold JOS54_RS03575 IPR001650 Helicase, C-terminal JOS54_RS03575 IPR011545 DEAD/DEAH box helicase domain JOS54_RS03575 IPR033454 RecG, wedge domain JOS54_RS03580 IPR036117 DhaL domain superfamily JOS54_RS03580 IPR019986 DAK2 domain-containing protein YloV JOS54_RS03580 IPR004007 DhaL domain JOS54_RS03580 IPR033470 Uncharacterised protein, DhaK domain JOS54_RS03595 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily JOS54_RS03595 IPR016166 FAD-binding domain, PCMH-type JOS54_RS03595 IPR006094 FAD linked oxidase, N-terminal JOS54_RS03595 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase JOS54_RS03595 IPR016169 FAD-binding, type PCMH, subdomain 2 JOS54_RS03595 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal JOS54_RS03595 IPR016167 FAD-binding, type PCMH, subdomain 1 JOS54_RS03595 IPR036318 FAD-binding, type PCMH-like superfamily JOS54_RS03600 IPR004276 Glycosyltransferase family 28, N-terminal domain JOS54_RS03600 IPR007235 Glycosyl transferase, family 28, C-terminal JOS54_RS03600 IPR006009 N-acetylglucosaminyltransferase, MurG JOS54_RS03605 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC JOS54_RS03605 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS03605 IPR006073 GTP binding domain JOS54_RS03605 IPR030393 EngB-type guanine nucleotide-binding (G) domain JOS54_RS03610 IPR008268 Peptidase S16, active site JOS54_RS03610 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS03610 IPR003111 Lon, substrate-binding domain JOS54_RS03610 IPR020568 Ribosomal protein S5 domain 2-type fold JOS54_RS03610 IPR027065 Lon protease JOS54_RS03610 IPR015947 PUA-like superfamily JOS54_RS03610 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JOS54_RS03610 IPR004815 Lon protease, bacterial/eukaryotic-type JOS54_RS03610 IPR027543 Lon protease, bacterial JOS54_RS03610 IPR003959 ATPase, AAA-type, core JOS54_RS03610 IPR003593 AAA+ ATPase domain JOS54_RS03610 IPR008269 Peptidase S16, Lon proteolytic domain JOS54_RS03615 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain JOS54_RS03615 IPR005215 Trigger factor JOS54_RS03615 IPR008880 Trigger factor, C-terminal JOS54_RS03615 IPR027304 Trigger factor/SurA domain superfamily JOS54_RS03615 IPR037041 Trigger factor, C-terminal domain superfamily JOS54_RS03615 IPR008881 Trigger factor, ribosome-binding, bacterial JOS54_RS03615 IPR036611 Trigger factor ribosome-binding domain superfamily JOS54_RS03650 IPR001943 UVR domain JOS54_RS03650 IPR010994 RuvA domain 2-like JOS54_RS03650 IPR035901 GIY-YIG endonuclease superfamily JOS54_RS03650 IPR036876 UVR domain superfamily JOS54_RS03650 IPR000305 GIY-YIG endonuclease JOS54_RS03650 IPR004791 UvrABC system, subunit C JOS54_RS03650 IPR001162 UvrC family homology region JOS54_RS03650 IPR038476 UvrC homology region 2 superfamily JOS54_RS03655 IPR007696 DNA mismatch repair protein MutS, core JOS54_RS03655 IPR036187 DNA mismatch repair protein MutS, core domain superfamily JOS54_RS03655 IPR036063 Smr domain superfamily JOS54_RS03655 IPR002625 Smr domain JOS54_RS03655 IPR005747 Endonuclease MutS2 JOS54_RS03655 IPR000432 DNA mismatch repair protein MutS, C-terminal JOS54_RS03655 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS03665 IPR012337 Ribonuclease H-like superfamily JOS54_RS03665 IPR001352 Ribonuclease HII/HIII JOS54_RS03665 IPR024567 Ribonuclease HII/HIII domain JOS54_RS03665 IPR004641 Ribonuclease HIII JOS54_RS03665 IPR024568 Ribonuclease HIII, N-terminal JOS54_RS03665 IPR036397 Ribonuclease H superfamily JOS54_RS03665 IPR012295 TBP domain superfamily JOS54_RS03670 IPR002125 Cytidine and deoxycytidylate deaminase domain JOS54_RS03670 IPR016192 APOBEC/CMP deaminase, zinc-binding JOS54_RS03670 IPR035105 Deoxycytidylate deaminase domain JOS54_RS03670 IPR015517 Deoxycytidylate deaminase-related JOS54_RS03670 IPR016193 Cytidine deaminase-like JOS54_RS03670 IPR016473 Deoxycytidylate deaminase JOS54_RS03675 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site JOS54_RS03675 IPR036986 RNA-binding S4 domain superfamily JOS54_RS03675 IPR002942 RNA-binding S4 domain JOS54_RS03675 IPR006145 Pseudouridine synthase, RsuA/RluA JOS54_RS03675 IPR020103 Pseudouridine synthase, catalytic domain superfamily JOS54_RS03675 IPR006225 Pseudouridine synthase, RluC/RluD JOS54_RS03680 IPR001872 Peptidase A8, signal peptidase II JOS54_RS03695 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS03695 IPR003439 ABC transporter-like JOS54_RS03695 IPR003593 AAA+ ATPase domain JOS54_RS03700 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II JOS54_RS03700 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III JOS54_RS03700 IPR005843 Alpha-D-phosphohexomutase, C-terminal JOS54_RS03700 IPR005841 Alpha-D-phosphohexomutase superfamily JOS54_RS03700 IPR016066 Alpha-D-phosphohexomutase, conserved site JOS54_RS03700 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III JOS54_RS03700 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I JOS54_RS03700 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily JOS54_RS03705 IPR001610 PAC motif JOS54_RS03705 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JOS54_RS03705 IPR013656 PAS fold-4 JOS54_RS03705 IPR000014 PAS domain JOS54_RS03705 IPR001789 Signal transduction response regulator, receiver domain JOS54_RS03705 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JOS54_RS03705 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JOS54_RS03705 IPR035965 PAS domain superfamily JOS54_RS03705 IPR000700 PAS-associated, C-terminal JOS54_RS03705 IPR011006 CheY-like superfamily JOS54_RS03705 IPR003594 Histidine kinase/HSP90-like ATPase JOS54_RS03705 IPR005467 Histidine kinase domain JOS54_RS03705 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JOS54_RS03710 IPR001789 Signal transduction response regulator, receiver domain JOS54_RS03710 IPR001867 OmpR/PhoB-type DNA-binding domain JOS54_RS03710 IPR011006 CheY-like superfamily JOS54_RS03710 IPR036388 Winged helix-like DNA-binding domain superfamily JOS54_RS03710 IPR039420 Transcriptional regulatory protein WalR-like JOS54_RS03715 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 JOS54_RS03715 IPR000808 Mrp, conserved site JOS54_RS03715 IPR019591 Mrp/NBP35 ATP-binding protein JOS54_RS03715 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS03725 IPR036390 Winged helix DNA-binding domain superfamily JOS54_RS03725 IPR036388 Winged helix-like DNA-binding domain superfamily JOS54_RS03725 IPR005234 Chromosome segregation/condensation protein ScpB JOS54_RS03730 IPR003768 Segregation and condensation protein A JOS54_RS03730 IPR023093 ScpA-like, C-terminal JOS54_RS03735 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain JOS54_RS03735 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JOS54_RS03735 IPR002300 Aminoacyl-tRNA synthetase, class Ia JOS54_RS03735 IPR002302 Leucine-tRNA ligase JOS54_RS03735 IPR025709 Leucyl-tRNA synthetase, editing domain JOS54_RS03735 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding JOS54_RS03735 IPR015413 Methionyl/Leucyl tRNA synthetase JOS54_RS03735 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JOS54_RS03735 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding JOS54_RS03750 IPR004560 L-ribulose-5-phosphate 3-epimerase JOS54_RS03750 IPR023492 L-ribulose-5-phosphate 3-epimerase, Enterobacteriaceae JOS54_RS03750 IPR036237 Xylose isomerase-like superfamily JOS54_RS03750 IPR013022 Xylose isomerase-like, TIM barrel domain JOS54_RS03755 IPR004661 L-ribulose-5-phosphate 4-epimerase JOS54_RS03755 IPR001303 Class II aldolase/adducin N-terminal JOS54_RS03755 IPR036409 Class II aldolase/adducin N-terminal domain superfamily JOS54_RS03765 IPR013011 Phosphotransferase system, EIIB component, type 2 JOS54_RS03765 IPR003501 Phosphotransferase system, EIIB component, type 2/3 JOS54_RS03765 IPR036095 PTS system IIB component-like superfamily JOS54_RS03770 IPR004703 Phosphotransferase system, sugar-specific permease component JOS54_RS03780 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JOS54_RS03780 IPR023951 L-ascorbate-6-phosphate lactonase UlaG JOS54_RS03785 IPR037171 NagB/RpiA transferase-like JOS54_RS03785 IPR018356 Transcription regulator, HTH DeoR-type, conserved site JOS54_RS03785 IPR014036 DeoR C-terminal sensor domain JOS54_RS03785 IPR036388 Winged helix-like DNA-binding domain superfamily JOS54_RS03785 IPR036390 Winged helix DNA-binding domain superfamily JOS54_RS03785 IPR001034 DeoR-type HTH domain JOS54_RS03790 IPR039421 Type I protein exporter JOS54_RS03790 IPR003439 ABC transporter-like JOS54_RS03790 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS03790 IPR011917 ABC transporter, lipid A export, MsbA JOS54_RS03790 IPR017871 ABC transporter, conserved site JOS54_RS03790 IPR036640 ABC transporter type 1, transmembrane domain superfamily JOS54_RS03790 IPR011527 ABC transporter type 1, transmembrane domain JOS54_RS03790 IPR003593 AAA+ ATPase domain JOS54_RS03795 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JOS54_RS03795 IPR017871 ABC transporter, conserved site JOS54_RS03795 IPR003439 ABC transporter-like JOS54_RS03795 IPR036640 ABC transporter type 1, transmembrane domain superfamily JOS54_RS03795 IPR011527 ABC transporter type 1, transmembrane domain JOS54_RS03795 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS03795 IPR017938 Riboflavin synthase-like beta-barrel JOS54_RS03795 IPR003593 AAA+ ATPase domain JOS54_RS03795 IPR007037 Siderophore-interacting protein, C-terminal domain JOS54_RS03795 IPR017927 FAD-binding domain, ferredoxin reductase-type JOS54_RS03795 IPR013113 FAD-binding 9, siderophore-interacting JOS54_RS03805 IPR017871 ABC transporter, conserved site JOS54_RS03805 IPR003593 AAA+ ATPase domain JOS54_RS03805 IPR003439 ABC transporter-like JOS54_RS03805 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS03840 IPR002052 DNA methylase, N-6 adenine-specific, conserved site JOS54_RS03840 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase JOS54_RS03840 IPR007848 Methyltransferase small domain JOS54_RS03840 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JOS54_RS03845 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type JOS54_RS03845 IPR003141 Polymerase/histidinol phosphatase, N-terminal JOS54_RS03845 IPR004805 DNA polymerase III, alpha subunit JOS54_RS03845 IPR016195 Polymerase/histidinol phosphatase-like JOS54_RS03845 IPR004013 PHP domain JOS54_RS03845 IPR029460 DNA polymerase, helix-hairpin-helix motif JOS54_RS03845 IPR040982 DNA polymerase III alpha subunit finger domain JOS54_RS03845 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain JOS54_RS03845 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain JOS54_RS03850 IPR023346 Lysozyme-like domain superfamily JOS54_RS03850 IPR001264 Glycosyl transferase, family 51 JOS54_RS03850 IPR012338 Beta-lactamase/transpeptidase-like JOS54_RS03850 IPR036950 Penicillin binding protein transglycosylase domain JOS54_RS03850 IPR001460 Penicillin-binding protein, transpeptidase JOS54_RS03855 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal JOS54_RS03855 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily JOS54_RS03855 IPR013328 6-phosphogluconate dehydrogenase, domain 2 JOS54_RS03855 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent JOS54_RS03855 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal JOS54_RS03855 IPR036291 NAD(P)-binding domain superfamily JOS54_RS03860 IPR006073 GTP binding domain JOS54_RS03860 IPR016484 GTP-binding protein EngA JOS54_RS03860 IPR031166 EngA-type guanine nucleotide-binding (G) domain JOS54_RS03860 IPR015946 K homology domain-like, alpha/beta JOS54_RS03860 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS03860 IPR005225 Small GTP-binding protein domain JOS54_RS03860 IPR032859 GTPase Der, C-terminal KH-domain-like JOS54_RS03865 IPR011994 Cytidylate kinase domain JOS54_RS03865 IPR003136 Cytidylate kinase JOS54_RS03865 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS03875 IPR024529 ECF transporter, substrate-specific component JOS54_RS03875 IPR025720 ECF transporter, Riboflavin transporter RibU JOS54_RS03880 IPR012340 Nucleic acid-binding, OB-fold JOS54_RS03880 IPR015365 Elongation factor P, C-terminal JOS54_RS03880 IPR020599 Translation elongation factor P/YeiP JOS54_RS03880 IPR013185 Translation elongation factor, KOW-like JOS54_RS03880 IPR013852 Translation elongation factor P/YeiP, conserved site JOS54_RS03880 IPR011768 Translation elongation factor P JOS54_RS03880 IPR008991 Translation protein SH3-like domain superfamily JOS54_RS03880 IPR014722 Ribosomal protein L2, domain 2 JOS54_RS03880 IPR001059 Translation elongation factor P/YeiP, central JOS54_RS03900 IPR000983 Bacterial general secretion pathway protein G-type pilin JOS54_RS03900 IPR016940 ComG operon protein C JOS54_RS03900 IPR012902 Prokaryotic N-terminal methylation site JOS54_RS03910 IPR003593 AAA+ ATPase domain JOS54_RS03910 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS03910 IPR001482 Type II/IV secretion system protein JOS54_RS03915 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JOS54_RS03915 IPR001279 Metallo-beta-lactamase JOS54_RS03920 IPR038584 Ribosomal protein L33 superfamily JOS54_RS03920 IPR001705 Ribosomal protein L33 JOS54_RS03920 IPR018264 Ribosomal protein L33, conserved site JOS54_RS03920 IPR011332 Zinc-binding ribosomal protein JOS54_RS03925 IPR011005 Dihydropteroate synthase-like JOS54_RS03925 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial JOS54_RS03925 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type JOS54_RS03930 IPR014001 Helicase superfamily 1/2, ATP-binding domain JOS54_RS03930 IPR011545 DEAD/DEAH box helicase domain JOS54_RS03930 IPR030881 DEAD-box ATP-dependent RNA helicase CshB JOS54_RS03930 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS03930 IPR001650 Helicase, C-terminal JOS54_RS03930 IPR014014 RNA helicase, DEAD-box type, Q motif JOS54_RS03935 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase JOS54_RS03940 IPR036986 RNA-binding S4 domain superfamily JOS54_RS03940 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site JOS54_RS03940 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F JOS54_RS03940 IPR006145 Pseudouridine synthase, RsuA/RluA JOS54_RS03940 IPR020103 Pseudouridine synthase, catalytic domain superfamily JOS54_RS03940 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain JOS54_RS03940 IPR002942 RNA-binding S4 domain JOS54_RS03960 IPR013324 RNA polymerase sigma factor, region 3/4-like JOS54_RS03960 IPR009042 RNA polymerase sigma-70 region 1.2 JOS54_RS03960 IPR000943 RNA polymerase sigma-70 JOS54_RS03960 IPR014284 RNA polymerase sigma-70 like domain JOS54_RS03960 IPR042189 Sigma-70 factor, region 1.1 superfamily JOS54_RS03960 IPR013325 RNA polymerase sigma factor, region 2 JOS54_RS03960 IPR028630 RNA polymerase sigma factor RpoD JOS54_RS03960 IPR007127 RNA polymerase sigma factor 70, region 1.1 JOS54_RS03960 IPR007630 RNA polymerase sigma-70 region 4 JOS54_RS03960 IPR007624 RNA polymerase sigma-70 region 3 JOS54_RS03960 IPR007627 RNA polymerase sigma-70 region 2 JOS54_RS03960 IPR036388 Winged helix-like DNA-binding domain superfamily JOS54_RS03960 IPR012760 RNA polymerase sigma factor RpoD, C-terminal JOS54_RS03965 IPR002694 Zinc finger, CHC2-type JOS54_RS03965 IPR006171 TOPRIM domain JOS54_RS03965 IPR030846 DNA primase DnaG, bacteria JOS54_RS03965 IPR036977 DNA Primase, CHC2-type zinc finger JOS54_RS03965 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal JOS54_RS03965 IPR013264 DNA primase, catalytic core, N-terminal JOS54_RS03965 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily JOS54_RS03965 IPR034151 Bacterial DnaG primase, TOPRIM domain JOS54_RS03965 IPR006295 DNA primase, DnaG JOS54_RS03965 IPR019475 DNA primase, DnaB-helicase binding domain JOS54_RS03970 IPR006195 Aminoacyl-tRNA synthetase, class II JOS54_RS03970 IPR004154 Anticodon-binding JOS54_RS03970 IPR036621 Anticodon-binding domain superfamily JOS54_RS03970 IPR027031 Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 JOS54_RS03970 IPR022961 Glycine-tRNA ligase, bacterial JOS54_RS03970 IPR033731 Glycyl-tRNA synthetase-like core domain JOS54_RS03970 IPR002315 Glycyl-tRNA synthetase JOS54_RS03970 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) JOS54_RS03975 IPR012340 Nucleic acid-binding, OB-fold JOS54_RS03975 IPR003717 Recombination protein O, RecO JOS54_RS03975 IPR037278 ARFGAP/RecO-like zinc finger JOS54_RS03975 IPR022572 DNA replication/recombination mediator RecO, N-terminal JOS54_RS03980 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS03980 IPR005225 Small GTP-binding protein domain JOS54_RS03980 IPR015946 K homology domain-like, alpha/beta JOS54_RS03980 IPR006073 GTP binding domain JOS54_RS03980 IPR005662 GTP-binding protein Era JOS54_RS03980 IPR030388 Era-type guanine nucleotide-binding (G) domain JOS54_RS03980 IPR004044 K Homology domain, type 2 JOS54_RS03980 IPR009019 K homology domain superfamily, prokaryotic type JOS54_RS03985 IPR016192 APOBEC/CMP deaminase, zinc-binding JOS54_RS03985 IPR002125 Cytidine and deoxycytidylate deaminase domain JOS54_RS03985 IPR006262 Cytidine deaminase, homotetrameric JOS54_RS03985 IPR016193 Cytidine deaminase-like JOS54_RS03990 IPR020549 Endoribonuclease YbeY, conserved site JOS54_RS03990 IPR023091 Metalloprotease catalytic domain superfamily, predicted JOS54_RS03990 IPR002036 Endoribonuclease YbeY JOS54_RS03995 IPR012337 Ribonuclease H-like superfamily JOS54_RS03995 IPR001584 Integrase, catalytic core JOS54_RS03995 IPR036397 Ribonuclease H superfamily JOS54_RS03995 IPR009057 Homeobox-like domain superfamily JOS54_RS03995 IPR038965 Transposase InsF-like JOS54_RS04000 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS04000 IPR003714 PhoH-like protein JOS54_RS04010 IPR001911 Ribosomal protein S21 JOS54_RS04010 IPR038380 Ribosomal protein S21 superfamily JOS54_RS04010 IPR018278 Ribosomal protein S21, conserved site JOS54_RS04020 IPR023406 DNA topoisomerase, type IA, active site JOS54_RS04020 IPR013497 DNA topoisomerase, type IA, central JOS54_RS04020 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 JOS54_RS04020 IPR023405 DNA topoisomerase, type IA, core domain JOS54_RS04020 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 JOS54_RS04020 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 JOS54_RS04020 IPR005738 DNA topoisomerase III JOS54_RS04020 IPR003602 DNA topoisomerase, type IA, DNA-binding domain JOS54_RS04020 IPR006171 TOPRIM domain JOS54_RS04020 IPR034144 DNA topoisomerase 3-like, TOPRIM domain JOS54_RS04020 IPR003601 DNA topoisomerase, type IA, domain 2 JOS54_RS04020 IPR000380 DNA topoisomerase, type IA JOS54_RS04030 IPR025669 AAA domain JOS54_RS04030 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS04140 IPR000424 Primosome PriB/single-strand DNA-binding JOS54_RS04140 IPR011344 Single-stranded DNA-binding protein JOS54_RS04140 IPR012340 Nucleic acid-binding, OB-fold JOS54_RS04205 IPR034739 UvrD/AddA helicase, N-terminal JOS54_RS04205 IPR000212 DNA helicase, UvrD/REP type JOS54_RS04205 IPR013986 DExx box DNA helicase domain superfamily JOS54_RS04205 IPR005751 ATP-dependent DNA helicase PcrA JOS54_RS04205 IPR014017 UvrD-like DNA helicase, C-terminal JOS54_RS04205 IPR014016 UvrD-like helicase, ATP-binding domain JOS54_RS04205 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS04220 IPR009057 Homeobox-like domain superfamily JOS54_RS04220 IPR001584 Integrase, catalytic core JOS54_RS04220 IPR012337 Ribonuclease H-like superfamily JOS54_RS04220 IPR036397 Ribonuclease H superfamily JOS54_RS04220 IPR038965 Transposase InsF-like JOS54_RS04225 IPR002915 DeoC/FbaB/ lacD aldolase JOS54_RS04225 IPR028581 Deoxyribose-phosphate aldolase type I JOS54_RS04225 IPR011343 Deoxyribose-phosphate aldolase JOS54_RS04225 IPR013785 Aldolase-type TIM barrel JOS54_RS04230 IPR000713 Mur ligase, N-terminal catalytic domain JOS54_RS04230 IPR013221 Mur ligase, central JOS54_RS04230 IPR035911 MurE/MurF, N-terminal JOS54_RS04230 IPR036615 Mur ligase, C-terminal domain superfamily JOS54_RS04230 IPR036565 Mur-like, catalytic domain superfamily JOS54_RS04230 IPR004101 Mur ligase, C-terminal JOS54_RS04230 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase JOS54_RS04235 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JOS54_RS04235 IPR006700 Ribosomal RNA small subunit methyltransferase E JOS54_RS04235 IPR029028 Alpha/beta knot methyltransferases JOS54_RS04240 IPR016169 FAD-binding, type PCMH, subdomain 2 JOS54_RS04240 IPR005170 Transporter-associated domain JOS54_RS04240 IPR002550 CNNM, transmembrane domain JOS54_RS04240 IPR000644 CBS domain JOS54_RS04240 IPR036318 FAD-binding, type PCMH-like superfamily JOS54_RS04245 IPR000158 Cell division protein FtsZ JOS54_RS04245 IPR020805 Cell division protein FtsZ, conserved site JOS54_RS04245 IPR008280 Tubulin/FtsZ, C-terminal JOS54_RS04245 IPR024757 Cell division protein FtsZ, C-terminal JOS54_RS04245 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily JOS54_RS04245 IPR036525 Tubulin/FtsZ, GTPase domain superfamily JOS54_RS04245 IPR003008 Tubulin/FtsZ, GTPase domain JOS54_RS04245 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain JOS54_RS04255 IPR002528 Multi antimicrobial extrusion protein JOS54_RS04260 IPR026569 Ribosomal protein L28/L24 JOS54_RS04260 IPR037147 Ribosomal protein L28/L24 superfamily JOS54_RS04260 IPR034704 L28p-like JOS54_RS04260 IPR001383 Ribosomal protein L28 JOS54_RS04265 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily JOS54_RS04265 IPR006282 Thiamin pyrophosphokinase JOS54_RS04265 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain JOS54_RS04265 IPR007371 Thiamin pyrophosphokinase, catalytic domain JOS54_RS04265 IPR036371 Thiamin pyrophosphokinase, thiamin-binding domain superfamily JOS54_RS04270 IPR011060 Ribulose-phosphate binding barrel JOS54_RS04270 IPR000056 Ribulose-phosphate 3-epimerase-like JOS54_RS04270 IPR013785 Aldolase-type TIM barrel JOS54_RS04270 IPR026019 Ribulose-phosphate 3-epimerase JOS54_RS04275 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS04275 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal JOS54_RS04275 IPR012340 Nucleic acid-binding, OB-fold JOS54_RS04275 IPR010914 RsgA GTPase domain JOS54_RS04275 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain JOS54_RS04275 IPR004881 Ribosome biogenesis GTPase RsgA JOS54_RS04280 IPR008271 Serine/threonine-protein kinase, active site JOS54_RS04280 IPR017441 Protein kinase, ATP binding site JOS54_RS04280 IPR005543 PASTA domain JOS54_RS04280 IPR011009 Protein kinase-like domain superfamily JOS54_RS04280 IPR000719 Protein kinase domain JOS54_RS04285 IPR036457 PPM-type phosphatase domain superfamily JOS54_RS04285 IPR015655 Protein phosphatase 2C family JOS54_RS04285 IPR001932 PPM-type phosphatase domain JOS54_RS04290 IPR040072 Methyltransferase (Class A) JOS54_RS04290 IPR013785 Aldolase-type TIM barrel JOS54_RS04290 IPR027492 Dual-specificity RNA methyltransferase RlmN JOS54_RS04290 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr JOS54_RS04290 IPR007197 Radical SAM JOS54_RS04295 IPR011023 Nop2p JOS54_RS04295 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal JOS54_RS04295 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain JOS54_RS04295 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type JOS54_RS04295 IPR023267 RNA (C5-cytosine) methyltransferase JOS54_RS04295 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JOS54_RS04295 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site JOS54_RS04295 IPR023545 rRNA small subunit methyltransferase F JOS54_RS04300 IPR041236 Primosomal protein N, C-terminal domain JOS54_RS04300 IPR006935 Helicase/UvrB, N-terminal JOS54_RS04300 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily JOS54_RS04300 IPR005259 Primosomal protein N' JOS54_RS04300 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS04300 IPR001650 Helicase, C-terminal JOS54_RS04300 IPR014001 Helicase superfamily 1/2, ATP-binding domain JOS54_RS04300 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain JOS54_RS04300 IPR041222 Primosomal protein N', 3' DNA-binding domain JOS54_RS04305 IPR037171 NagB/RpiA transferase-like JOS54_RS04305 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily JOS54_RS04305 IPR002698 5-formyltetrahydrofolate cyclo-ligase JOS54_RS04310 IPR010231 SUF system FeS cluster assembly, SufB JOS54_RS04310 IPR000825 SUF system FeS cluster assembly, SufBD JOS54_RS04310 IPR037284 SUF system FeS cluster assembly, SufBD superfamily JOS54_RS04315 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal JOS54_RS04320 IPR010970 Cysteine desulfurase, SufS JOS54_RS04320 IPR016454 Cysteine desulfurase JOS54_RS04320 IPR000192 Aminotransferase class V domain JOS54_RS04320 IPR015424 Pyridoxal phosphate-dependent transferase JOS54_RS04320 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JOS54_RS04320 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JOS54_RS04320 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site JOS54_RS04325 IPR011542 SUF system FeS cluster assembly, SufD JOS54_RS04325 IPR037284 SUF system FeS cluster assembly, SufBD superfamily JOS54_RS04325 IPR000825 SUF system FeS cluster assembly, SufBD JOS54_RS04330 IPR003439 ABC transporter-like JOS54_RS04330 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS04330 IPR003593 AAA+ ATPase domain JOS54_RS04330 IPR017871 ABC transporter, conserved site JOS54_RS04330 IPR010230 FeS cluster assembly SUF system, ATPase SufC JOS54_RS04345 IPR011146 HIT-like domain JOS54_RS04345 IPR019808 Histidine triad, conserved site JOS54_RS04345 IPR001310 Histidine triad (HIT) protein JOS54_RS04345 IPR039384 HINT family JOS54_RS04345 IPR036265 HIT-like superfamily JOS54_RS04355 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain JOS54_RS04355 IPR029058 Alpha/Beta hydrolase fold JOS54_RS04360 IPR009061 Putative DNA-binding domain superfamily JOS54_RS04360 IPR000551 MerR-type HTH domain JOS54_RS04370 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily JOS54_RS04370 IPR006120 Resolvase, HTH domain JOS54_RS04370 IPR006119 Resolvase, N-terminal catalytic domain JOS54_RS04370 IPR006118 Recombinase, conserved site JOS54_RS04370 IPR009057 Homeobox-like domain superfamily JOS54_RS04410 IPR010093 SinI-like, DNA-binding domain JOS54_RS04410 IPR040198 Fido domain-containing protein JOS54_RS04410 IPR041657 Helix-turn-helix domain, group 17 JOS54_RS04410 IPR003812 Fido domain JOS54_RS04410 IPR036597 Fido-like domain superfamily JOS54_RS04420 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class JOS54_RS04420 IPR002052 DNA methylase, N-6 adenine-specific, conserved site JOS54_RS04420 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JOS54_RS04420 IPR001091 Restriction/modification DNA-methylase JOS54_RS04420 IPR002941 DNA methylase N-4/N-6 JOS54_RS04435 IPR012310 DNA ligase, ATP-dependent, central JOS54_RS04435 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JOS54_RS04435 IPR000843 LacI-type HTH domain JOS54_RS04435 IPR028082 Periplasmic binding protein-like I JOS54_RS04445 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component JOS54_RS04450 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit JOS54_RS04455 IPR004720 Phosphotransferase system, sorbose subfamily IIB component JOS54_RS04455 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily JOS54_RS04455 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup JOS54_RS04460 IPR010905 Glycosyl hydrolase, family 88 JOS54_RS04460 IPR012341 Six-hairpin glycosidase-like superfamily JOS54_RS04460 IPR008928 Six-hairpin glycosidase superfamily JOS54_RS04465 IPR031338 KDPG/KHG aldolase, active site 2 JOS54_RS04465 IPR031337 KDPG/KHG aldolase, active site 1 JOS54_RS04465 IPR013785 Aldolase-type TIM barrel JOS54_RS04465 IPR000887 KDPG/KHG aldolase JOS54_RS04470 IPR002139 Ribokinase/fructokinase JOS54_RS04470 IPR029056 Ribokinase-like JOS54_RS04470 IPR011611 Carbohydrate kinase PfkB JOS54_RS04470 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site JOS54_RS04475 IPR036291 NAD(P)-binding domain superfamily JOS54_RS04475 IPR002347 Short-chain dehydrogenase/reductase SDR JOS54_RS04475 IPR020904 Short-chain dehydrogenase/reductase, conserved site JOS54_RS04485 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 JOS54_RS04485 IPR011698 CobB/CobQ-like glutamine amidotransferase JOS54_RS04485 IPR029062 Class I glutamine amidotransferase-like JOS54_RS04485 IPR017929 CobB/CobQ glutamine amidotransferase JOS54_RS04490 IPR013564 Domain of unknown function DUF1727 JOS54_RS04490 IPR036565 Mur-like, catalytic domain superfamily JOS54_RS04490 IPR013221 Mur ligase, central JOS54_RS04495 IPR006674 HD domain JOS54_RS04495 IPR012340 Nucleic acid-binding, OB-fold JOS54_RS04495 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type JOS54_RS04495 IPR020873 3'-5' exoribonuclease YhaM JOS54_RS04495 IPR003607 HD/PDEase domain JOS54_RS04500 IPR001296 Glycosyl transferase, family 1 JOS54_RS04500 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain JOS54_RS04510 IPR001296 Glycosyl transferase, family 1 JOS54_RS04510 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain JOS54_RS04515 IPR002699 ATPase, V1 complex, subunit D JOS54_RS04520 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain JOS54_RS04520 IPR022879 V-type ATP synthase regulatory subunit B/beta JOS54_RS04520 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS04520 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain JOS54_RS04520 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site JOS54_RS04520 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily JOS54_RS04525 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain JOS54_RS04525 IPR031686 ATPsynthase alpha/beta subunit, N-terminal extension JOS54_RS04525 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site JOS54_RS04525 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain JOS54_RS04525 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily JOS54_RS04525 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal JOS54_RS04525 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS04525 IPR022878 V-type ATP synthase catalytic alpha chain JOS54_RS04525 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily JOS54_RS04545 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family JOS54_RS04560 IPR029061 Thiamin diphosphate-binding fold JOS54_RS04560 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain JOS54_RS04560 IPR011895 Pyruvate-flavodoxin oxidoreductase JOS54_RS04560 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal JOS54_RS04560 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II JOS54_RS04560 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain JOS54_RS04560 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain JOS54_RS04560 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JOS54_RS04560 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding JOS54_RS04560 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II JOS54_RS04560 IPR037112 Pyruvate-flavodoxin oxidoreductase, EKR domain superfamily JOS54_RS04560 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JOS54_RS04565 IPR029039 Flavoprotein-like superfamily JOS54_RS04565 IPR010960 Flavocytochrome c JOS54_RS04565 IPR036188 FAD/NAD(P)-binding domain superfamily JOS54_RS04565 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain JOS54_RS04565 IPR007329 FMN-binding JOS54_RS04565 IPR005025 NADPH-dependent FMN reductase-like JOS54_RS04565 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily JOS54_RS04570 IPR005359 Protein with unknown function UPF0154 JOS54_RS04585 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS04585 IPR018449 NIL domain JOS54_RS04585 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain JOS54_RS04585 IPR026253 Methionine import ATP-binding protein MetN JOS54_RS04585 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal JOS54_RS04585 IPR003593 AAA+ ATPase domain JOS54_RS04585 IPR003439 ABC transporter-like JOS54_RS04585 IPR017871 ABC transporter, conserved site JOS54_RS04590 IPR036388 Winged helix-like DNA-binding domain superfamily JOS54_RS04590 IPR036390 Winged helix DNA-binding domain superfamily JOS54_RS04590 IPR000524 Transcription regulator HTH, GntR JOS54_RS04595 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type JOS54_RS04595 IPR004524 Aspartate-tRNA ligase, type 1 JOS54_RS04595 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) JOS54_RS04595 IPR006195 Aminoacyl-tRNA synthetase, class II JOS54_RS04595 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb JOS54_RS04595 IPR004115 GAD-like domain superfamily JOS54_RS04595 IPR029351 GAD domain JOS54_RS04595 IPR012340 Nucleic acid-binding, OB-fold JOS54_RS04600 IPR036621 Anticodon-binding domain superfamily JOS54_RS04600 IPR015807 Histidine-tRNA ligase JOS54_RS04600 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain JOS54_RS04600 IPR033656 Histidyl-anticodon-binding JOS54_RS04600 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit JOS54_RS04600 IPR004154 Anticodon-binding JOS54_RS04600 IPR006195 Aminoacyl-tRNA synthetase, class II JOS54_RS04605 IPR033655 RelA, TGS domain JOS54_RS04605 IPR012676 TGS-like JOS54_RS04605 IPR004095 TGS JOS54_RS04605 IPR007685 RelA/SpoT JOS54_RS04605 IPR004811 RelA/SpoT family JOS54_RS04605 IPR003607 HD/PDEase domain JOS54_RS04605 IPR012675 Beta-grasp domain superfamily JOS54_RS04605 IPR002912 ACT domain JOS54_RS04610 IPR005764 Adenine phosphoribosyl transferase JOS54_RS04610 IPR000836 Phosphoribosyltransferase domain JOS54_RS04610 IPR029057 Phosphoribosyltransferase-like JOS54_RS04615 IPR001667 DDH domain JOS54_RS04615 IPR041122 RecJ, OB domain JOS54_RS04615 IPR018779 Single-stranded-DNA-specific exonuclease RecJ, C-terminal JOS54_RS04615 IPR004610 Bacterial RecJ exonuclease JOS54_RS04615 IPR003156 DHHA1 domain JOS54_RS04615 IPR038763 DHH phosphoesterase superfamily JOS54_RS04620 IPR036565 Mur-like, catalytic domain superfamily JOS54_RS04620 IPR036615 Mur ligase, C-terminal domain superfamily JOS54_RS04620 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase JOS54_RS04620 IPR013221 Mur ligase, central JOS54_RS04625 IPR023214 HAD superfamily JOS54_RS04625 IPR010976 Beta-phosphoglucomutase hydrolase JOS54_RS04625 IPR010972 Beta-phosphoglucomutase JOS54_RS04625 IPR036412 HAD-like superfamily JOS54_RS04625 IPR006439 HAD hydrolase, subfamily IA JOS54_RS04625 IPR041492 Haloacid dehalogenase-like hydrolase JOS54_RS04625 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JOS54_RS04635 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site JOS54_RS04635 IPR005791 Protein translocase subunit SecD JOS54_RS04635 IPR005665 Protein-export membrane protein SecF, bacterial JOS54_RS04635 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JOS54_RS04635 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial JOS54_RS04645 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site JOS54_RS04645 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase JOS54_RS04645 IPR000715 Glycosyl transferase, family 4 JOS54_RS04650 IPR012338 Beta-lactamase/transpeptidase-like JOS54_RS04650 IPR036138 Penicillin-binding protein, dimerisation domain superfamily JOS54_RS04650 IPR005311 Penicillin-binding protein, dimerisation domain JOS54_RS04650 IPR001460 Penicillin-binding protein, transpeptidase JOS54_RS04650 IPR005543 PASTA domain JOS54_RS04660 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JOS54_RS04660 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily JOS54_RS04660 IPR002903 Ribosomal RNA small subunit methyltransferase H JOS54_RS04665 IPR003444 Transcriptional regulator MraZ JOS54_RS04665 IPR037914 SpoVT-AbrB domain superfamily JOS54_RS04665 IPR007159 SpoVT-AbrB domain JOS54_RS04665 IPR038619 MraZ superfamily JOS54_RS04665 IPR035642 MraZ, N-terminal JOS54_RS04665 IPR020603 MraZ domain JOS54_RS04665 IPR035644 MraZ, C-terminal JOS54_RS04670 IPR011332 Zinc-binding ribosomal protein JOS54_RS04670 IPR002677 Ribosomal protein L32p JOS54_RS04680 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JOS54_RS04680 IPR008513 tRNA(Met) cytidine acetate ligase JOS54_RS04685 IPR017856 Integrase-like, N-terminal JOS54_RS04685 IPR002876 Transcriptional regulator TACO1-like JOS54_RS04685 IPR026564 Transcriptional regulator TACO1-like, domain 3 JOS54_RS04685 IPR029072 YebC-like JOS54_RS04690 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type JOS54_RS04690 IPR029052 Metallo-dependent phosphatase-like JOS54_RS04690 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) JOS54_RS04695 IPR008731 Phosphotransferase system, enzyme I N-terminal JOS54_RS04695 IPR018274 PEP-utilising enzyme, active site JOS54_RS04695 IPR008279 PEP-utilising enzyme, mobile domain JOS54_RS04695 IPR006318 Phosphotransferase system, enzyme I-like JOS54_RS04695 IPR036618 PtsI, HPr-binding domain superfamily JOS54_RS04695 IPR023151 PEP-utilising enzyme, conserved site JOS54_RS04695 IPR036637 Phosphohistidine domain superfamily JOS54_RS04695 IPR000121 PEP-utilising enzyme, C-terminal JOS54_RS04695 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily JOS54_RS04695 IPR024692 Phosphotransferase system, enzyme I JOS54_RS04695 IPR040442 Pyruvate kinase-like domain superfamily JOS54_RS04705 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily JOS54_RS04705 IPR034694 Ribosome hibernation promoting factor, long/plastid JOS54_RS04705 IPR003489 Ribosome hibernation promoting factor/RaiA JOS54_RS04705 IPR036567 Ribosome hibernation promotion factor-like JOS54_RS04705 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal JOS54_RS04710 IPR000600 ROK family JOS54_RS04710 IPR000835 MarR-type HTH domain JOS54_RS04710 IPR036390 Winged helix DNA-binding domain superfamily JOS54_RS04710 IPR036388 Winged helix-like DNA-binding domain superfamily JOS54_RS04715 IPR025660 Cysteine peptidase, histidine active site JOS54_RS04715 IPR000169 Cysteine peptidase, cysteine active site JOS54_RS04715 IPR038765 Papain-like cysteine peptidase superfamily JOS54_RS04715 IPR004134 Peptidase C1B, bleomycin hydrolase JOS54_RS04720 IPR020568 Ribosomal protein S5 domain 2-type fold JOS54_RS04720 IPR003593 AAA+ ATPase domain JOS54_RS04720 IPR003959 ATPase, AAA-type, core JOS54_RS04720 IPR008268 Peptidase S16, active site JOS54_RS04720 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JOS54_RS04720 IPR004815 Lon protease, bacterial/eukaryotic-type JOS54_RS04720 IPR008269 Peptidase S16, Lon proteolytic domain JOS54_RS04720 IPR027065 Lon protease JOS54_RS04720 IPR003111 Lon, substrate-binding domain JOS54_RS04720 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS04720 IPR027543 Lon protease, bacterial JOS54_RS04720 IPR015947 PUA-like superfamily JOS54_RS04725 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal JOS54_RS04725 IPR032423 AAA C-terminal domain JOS54_RS04725 IPR008824 RuvB-like P-loop domain JOS54_RS04725 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS04725 IPR003593 AAA+ ATPase domain JOS54_RS04725 IPR021886 MgsA AAA+ ATPase C-terminal JOS54_RS04740 IPR001757 P-type ATPase JOS54_RS04740 IPR023299 P-type ATPase, cytoplasmic domain N JOS54_RS04740 IPR023214 HAD superfamily JOS54_RS04740 IPR036412 HAD-like superfamily JOS54_RS04740 IPR008250 P-type ATPase, A domain superfamily JOS54_RS04740 IPR023298 P-type ATPase, transmembrane domain superfamily JOS54_RS04740 IPR018303 P-type ATPase, phosphorylation site JOS54_RS04785 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 JOS54_RS04785 IPR001996 Phosphotransferase system, IIB component, type 1 JOS54_RS04785 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site JOS54_RS04785 IPR011055 Duplicated hybrid motif JOS54_RS04785 IPR011299 PTS system glucose-specific IIBC component JOS54_RS04785 IPR036878 Glucose permease domain IIB JOS54_RS04785 IPR013013 Phosphotransferase system, EIIC component, type 1 JOS54_RS04785 IPR003352 Phosphotransferase system, EIIC JOS54_RS04785 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component JOS54_RS04790 IPR001550 Transcription antiterminator, conserved site JOS54_RS04790 IPR036634 PRD domain superfamily JOS54_RS04790 IPR011608 PRD domain JOS54_RS04790 IPR036650 CAT RNA-binding domain superfamily JOS54_RS04790 IPR004341 CAT RNA-binding domain JOS54_RS04795 IPR001996 Phosphotransferase system, IIB component, type 1 JOS54_RS04795 IPR011055 Duplicated hybrid motif JOS54_RS04795 IPR036878 Glucose permease domain IIB JOS54_RS04795 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site JOS54_RS04795 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 JOS54_RS04795 IPR010973 Phosphotransferase system, sucrose-specific IIBC component JOS54_RS04795 IPR013013 Phosphotransferase system, EIIC component, type 1 JOS54_RS04795 IPR003352 Phosphotransferase system, EIIC JOS54_RS04805 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein JOS54_RS04805 IPR006059 Bacterial extracellular solute-binding protein JOS54_RS04810 IPR035906 MetI-like superfamily JOS54_RS04810 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JOS54_RS04815 IPR035906 MetI-like superfamily JOS54_RS04815 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JOS54_RS04820 IPR013611 Transport-associated OB, type 2 JOS54_RS04820 IPR003593 AAA+ ATPase domain JOS54_RS04820 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS04820 IPR008995 Molybdate/tungstate binding, C-terminal JOS54_RS04820 IPR017871 ABC transporter, conserved site JOS54_RS04820 IPR003439 ABC transporter-like JOS54_RS04820 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA JOS54_RS04820 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit JOS54_RS04825 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JOS54_RS04825 IPR001387 Cro/C1-type helix-turn-helix domain JOS54_RS04830 IPR005746 Thioredoxin JOS54_RS04830 IPR036249 Thioredoxin-like superfamily JOS54_RS04830 IPR017937 Thioredoxin, conserved site JOS54_RS04830 IPR013766 Thioredoxin domain JOS54_RS04835 IPR018321 Glucosamine-6-phosphate isomerase, conserved site JOS54_RS04835 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase JOS54_RS04835 IPR037171 NagB/RpiA transferase-like JOS54_RS04835 IPR004547 Glucosamine-6-phosphate isomerase JOS54_RS04845 IPR002505 Phosphate acetyl/butaryl transferase JOS54_RS04845 IPR042112 Phosphate acetyltransferase, domain 2 JOS54_RS04845 IPR042113 Phosphate acetyltransferase, domain 1 JOS54_RS04845 IPR004614 Phosphate acetyltransferase JOS54_RS04845 IPR012147 Phosphate acetyl/butyryltransferase JOS54_RS04860 IPR025948 HTH-like domain JOS54_RS04860 IPR001584 Integrase, catalytic core JOS54_RS04860 IPR038965 Transposase InsF-like JOS54_RS04860 IPR036397 Ribonuclease H superfamily JOS54_RS04860 IPR012337 Ribonuclease H-like superfamily JOS54_RS04865 IPR027410 TCP-1-like chaperonin intermediate domain superfamily JOS54_RS04865 IPR001844 Chaperonin Cpn60 JOS54_RS04865 IPR002423 Chaperonin Cpn60/TCP-1 family JOS54_RS04865 IPR027409 GroEL-like apical domain superfamily JOS54_RS04865 IPR027413 GroEL-like equatorial domain superfamily JOS54_RS04870 IPR020818 GroES chaperonin family JOS54_RS04870 IPR037124 GroES chaperonin superfamily JOS54_RS04870 IPR018369 Chaperonin GroES, conserved site JOS54_RS04870 IPR011032 GroES-like superfamily JOS54_RS04875 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily JOS54_RS04875 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit JOS54_RS04875 IPR012340 Nucleic acid-binding, OB-fold JOS54_RS04875 IPR005147 tRNA synthetase, B5-domain JOS54_RS04875 IPR005146 B3/B4 tRNA-binding domain JOS54_RS04875 IPR009061 Putative DNA-binding domain superfamily JOS54_RS04875 IPR005121 Ferrodoxin-fold anticodon-binding domain JOS54_RS04875 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain JOS54_RS04875 IPR002547 tRNA-binding domain JOS54_RS04875 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 JOS54_RS04875 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain JOS54_RS04880 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit JOS54_RS04880 IPR006195 Aminoacyl-tRNA synthetase, class II JOS54_RS04880 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm JOS54_RS04880 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial JOS54_RS04880 IPR002319 Phenylalanyl-tRNA synthetase JOS54_RS04880 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal JOS54_RS04890 IPR017968 Acylphosphatase, conserved site JOS54_RS04890 IPR020456 Acylphosphatase JOS54_RS04890 IPR001792 Acylphosphatase-like domain JOS54_RS04890 IPR036046 Acylphosphatase-like domain superfamily JOS54_RS04900 IPR016163 Aldehyde dehydrogenase, C-terminal JOS54_RS04900 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase JOS54_RS04900 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA JOS54_RS04900 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain JOS54_RS04900 IPR015590 Aldehyde dehydrogenase domain JOS54_RS04900 IPR016162 Aldehyde dehydrogenase, N-terminal JOS54_RS04900 IPR018211 Alcohol dehydrogenase, iron-type, conserved site JOS54_RS04900 IPR039697 Iron-type alcohol dehydrogenase-like JOS54_RS04900 IPR016161 Aldehyde/histidinol dehydrogenase JOS54_RS04905 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JOS54_RS04905 IPR013123 RNA 2-O ribose methyltransferase, substrate binding JOS54_RS04905 IPR001537 tRNA/rRNA methyltransferase, SpoU type JOS54_RS04905 IPR029064 50S ribosomal protein L30e-like JOS54_RS04905 IPR029028 Alpha/beta knot methyltransferases JOS54_RS04910 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JOS54_RS04910 IPR004441 RNA methyltransferase TrmH family JOS54_RS04910 IPR013123 RNA 2-O ribose methyltransferase, substrate binding JOS54_RS04910 IPR029028 Alpha/beta knot methyltransferases JOS54_RS04910 IPR001537 tRNA/rRNA methyltransferase, SpoU type JOS54_RS04915 IPR001539 Peptidase U32 JOS54_RS04915 IPR032525 Peptidase family U32, C-terminal JOS54_RS04945 IPR036397 Ribonuclease H superfamily JOS54_RS04945 IPR012340 Nucleic acid-binding, OB-fold JOS54_RS04945 IPR013520 Exonuclease, RNase T/DNA polymerase III JOS54_RS04945 IPR004013 PHP domain JOS54_RS04945 IPR024754 DNA polymerase III polC-like, N-terminal domain II JOS54_RS04945 IPR040982 DNA polymerase III alpha subunit finger domain JOS54_RS04945 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain JOS54_RS04945 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain JOS54_RS04945 IPR012337 Ribonuclease H-like superfamily JOS54_RS04945 IPR029460 DNA polymerase, helix-hairpin-helix motif JOS54_RS04945 IPR003141 Polymerase/histidinol phosphatase, N-terminal JOS54_RS04945 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type JOS54_RS04950 IPR036388 Winged helix-like DNA-binding domain superfamily JOS54_RS04950 IPR036390 Winged helix DNA-binding domain superfamily JOS54_RS04950 IPR018334 ArsR-type transcription regulator, HTH motif JOS54_RS04950 IPR011991 ArsR-like helix-turn-helix domain JOS54_RS04950 IPR001845 HTH ArsR-type DNA-binding domain JOS54_RS04960 IPR002616 tRNA-guanine(15) transglycosylase-like JOS54_RS04960 IPR036511 Queuine tRNA-ribosyltransferase-like JOS54_RS04960 IPR004803 tRNA-guanine transglycosylase JOS54_RS04965 IPR042119 QueA, domain 2 JOS54_RS04965 IPR042118 QueA, domain 1 JOS54_RS04965 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA JOS54_RS04965 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily JOS54_RS04970 IPR003828 Epoxyqueuosine reductase QueH JOS54_RS04985 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily JOS54_RS04985 IPR001206 Diacylglycerol kinase, catalytic domain JOS54_RS04985 IPR005218 Diacylglycerol/lipid kinase JOS54_RS04985 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal JOS54_RS04990 IPR001279 Metallo-beta-lactamase JOS54_RS04990 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JOS54_RS04990 IPR013471 Ribonuclease Z/BN JOS54_RS04995 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily JOS54_RS04995 IPR000644 CBS domain JOS54_RS04995 IPR038222 DHHA2 domain superfamily JOS54_RS04995 IPR001667 DDH domain JOS54_RS04995 IPR038763 DHH phosphoesterase superfamily JOS54_RS04995 IPR010766 DRTGG JOS54_RS04995 IPR004097 DHHA2 domain JOS54_RS05000 IPR001714 Peptidase M24, methionine aminopeptidase JOS54_RS05000 IPR000994 Peptidase M24 JOS54_RS05000 IPR036005 Creatinase/aminopeptidase-like JOS54_RS05000 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 JOS54_RS05005 IPR036157 dUTPase-like superfamily JOS54_RS05005 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase JOS54_RS05005 IPR033704 dUTPase, trimeric JOS54_RS05005 IPR029054 dUTPase-like JOS54_RS05015 IPR016185 Pre-ATP-grasp domain superfamily JOS54_RS05015 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site JOS54_RS05015 IPR013815 ATP-grasp fold, subdomain 1 JOS54_RS05015 IPR011127 D-alanine--D-alanine ligase, N-terminal domain JOS54_RS05015 IPR011095 D-alanine--D-alanine ligase, C-terminal JOS54_RS05015 IPR005905 D-alanine--D-alanine ligase JOS54_RS05015 IPR011761 ATP-grasp fold JOS54_RS05020 IPR035994 Nucleoside phosphorylase superfamily JOS54_RS05020 IPR004402 Purine nucleoside phosphorylase DeoD-type JOS54_RS05020 IPR018016 Nucleoside phosphorylase, conserved site JOS54_RS05020 IPR000845 Nucleoside phosphorylase domain JOS54_RS05030 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type JOS54_RS05030 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) JOS54_RS05030 IPR006195 Aminoacyl-tRNA synthetase, class II JOS54_RS05030 IPR002313 Lysine-tRNA ligase, class II JOS54_RS05030 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal JOS54_RS05030 IPR012340 Nucleic acid-binding, OB-fold JOS54_RS05035 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site JOS54_RS05035 IPR001525 C-5 cytosine methyltransferase JOS54_RS05035 IPR018117 DNA methylase, C-5 cytosine-specific, active site JOS54_RS05035 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JOS54_RS05040 IPR019037 Restriction endonuclease, type II, Bsp6I JOS54_RS05045 IPR005322 Peptidase C69, dipeptidase A JOS54_RS05060 IPR003740 Uncharacterised membrane protein YitT JOS54_RS05060 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal JOS54_RS05060 IPR019264 Domain of unknown function DUF2179 JOS54_RS05065 IPR036291 NAD(P)-binding domain superfamily JOS54_RS05065 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site JOS54_RS05065 IPR001753 Enoyl-CoA hydratase/isomerase JOS54_RS05065 IPR029045 ClpP/crotonase-like domain superfamily JOS54_RS05065 IPR012802 Fatty oxidation complex, alpha subunit FadJ JOS54_RS05065 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal JOS54_RS05065 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding JOS54_RS05065 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site JOS54_RS05065 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily JOS54_RS05070 IPR004619 Type III pantothenate kinase JOS54_RS05075 IPR035929 CoaB-like superfamily JOS54_RS05075 IPR003382 Flavoprotein JOS54_RS05075 IPR036551 Flavin prenyltransferase-like JOS54_RS05075 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal JOS54_RS05075 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC JOS54_RS05080 IPR024654 Calcineurin-like phosphoesterase domain, lpxH-type JOS54_RS05080 IPR029052 Metallo-dependent phosphatase-like JOS54_RS05080 IPR041802 YfcE-like, metallophosphatase domain JOS54_RS05080 IPR000979 Phosphodiesterase MJ0936/Vps29 JOS54_RS05080 IPR020935 Phosphodiesterase YfcE, conserved site JOS54_RS05090 IPR036412 HAD-like superfamily JOS54_RS05090 IPR023214 HAD superfamily JOS54_RS05100 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain JOS54_RS05100 IPR023186 Inosine/uridine-preferring nucleoside hydrolase JOS54_RS05100 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA JOS54_RS05100 IPR036452 Ribonucleoside hydrolase-like JOS54_RS05100 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site JOS54_RS05105 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site JOS54_RS05105 IPR023186 Inosine/uridine-preferring nucleoside hydrolase JOS54_RS05105 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain JOS54_RS05105 IPR036452 Ribonucleoside hydrolase-like JOS54_RS05105 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA JOS54_RS05110 IPR001851 ABC transporter, permease JOS54_RS05115 IPR001851 ABC transporter, permease JOS54_RS05120 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS05120 IPR017871 ABC transporter, conserved site JOS54_RS05120 IPR003439 ABC transporter-like JOS54_RS05120 IPR003593 AAA+ ATPase domain JOS54_RS05125 IPR003760 ABC transporter substrate-binding protein PnrA-like JOS54_RS05125 IPR028082 Periplasmic binding protein-like I JOS54_RS05130 IPR006330 Adenosine/adenine deaminase JOS54_RS05130 IPR032466 Metal-dependent hydrolase JOS54_RS05130 IPR001365 Adenosine/AMP deaminase domain JOS54_RS05130 IPR028893 Adenosine deaminase JOS54_RS05135 IPR010058 Uridine phosphorylase JOS54_RS05135 IPR035994 Nucleoside phosphorylase superfamily JOS54_RS05135 IPR000845 Nucleoside phosphorylase domain JOS54_RS05135 IPR018016 Nucleoside phosphorylase, conserved site JOS54_RS05140 IPR029056 Ribokinase-like JOS54_RS05140 IPR011611 Carbohydrate kinase PfkB JOS54_RS05145 IPR011304 L-lactate dehydrogenase JOS54_RS05145 IPR001236 Lactate/malate dehydrogenase, N-terminal JOS54_RS05145 IPR022383 Lactate/malate dehydrogenase, C-terminal JOS54_RS05145 IPR018177 L-lactate dehydrogenase, active site JOS54_RS05145 IPR001557 L-lactate/malate dehydrogenase JOS54_RS05145 IPR036291 NAD(P)-binding domain superfamily JOS54_RS05145 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal JOS54_RS05150 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type JOS54_RS05150 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase JOS54_RS05150 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal JOS54_RS05150 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JOS54_RS05155 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein JOS54_RS05155 IPR003841 Sodium-dependent phosphate transport protein JOS54_RS05170 IPR003265 HhH-GPD domain JOS54_RS05170 IPR011257 DNA glycosylase JOS54_RS05170 IPR005760 A/G-specific adenine glycosylase MutY JOS54_RS05170 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal JOS54_RS05170 IPR029119 MutY, C-terminal JOS54_RS05170 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif JOS54_RS05170 IPR015797 NUDIX hydrolase-like domain superfamily JOS54_RS05175 IPR010058 Uridine phosphorylase JOS54_RS05175 IPR035994 Nucleoside phosphorylase superfamily JOS54_RS05175 IPR018016 Nucleoside phosphorylase, conserved site JOS54_RS05175 IPR000845 Nucleoside phosphorylase domain JOS54_RS05195 IPR011006 CheY-like superfamily JOS54_RS05195 IPR001789 Signal transduction response regulator, receiver domain JOS54_RS05195 IPR024187 Signal transduction response regulator, citrate/malate metabolism JOS54_RS05200 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JOS54_RS05200 IPR010559 Signal transduction histidine kinase, internal region JOS54_RS05200 IPR005467 Histidine kinase domain JOS54_RS05200 IPR003660 HAMP domain JOS54_RS05200 IPR003594 Histidine kinase/HSP90-like ATPase JOS54_RS05200 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JOS54_RS05200 IPR033479 Double Cache domain 1 JOS54_RS05205 IPR010960 Flavocytochrome c JOS54_RS05205 IPR036188 FAD/NAD(P)-binding domain superfamily JOS54_RS05205 IPR007329 FMN-binding JOS54_RS05205 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain JOS54_RS05205 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily JOS54_RS05210 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component JOS54_RS05210 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site JOS54_RS05210 IPR036878 Glucose permease domain IIB JOS54_RS05210 IPR011301 PTS system, maltose/glucose-specific IIBC component JOS54_RS05210 IPR003352 Phosphotransferase system, EIIC JOS54_RS05210 IPR001996 Phosphotransferase system, IIB component, type 1 JOS54_RS05210 IPR013013 Phosphotransferase system, EIIC component, type 1 JOS54_RS05215 IPR002933 Peptidase M20 JOS54_RS05215 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site JOS54_RS05215 IPR036264 Bacterial exopeptidase dimerisation domain JOS54_RS05215 IPR010964 Peptidase M20A, peptidase V-related JOS54_RS05220 IPR002178 PTS EIIA type-2 domain JOS54_RS05220 IPR016152 Phosphotransferase/anion transporter JOS54_RS05220 IPR036634 PRD domain superfamily JOS54_RS05220 IPR036095 PTS system IIB component-like superfamily JOS54_RS05220 IPR007737 Mga helix-turn-helix domain JOS54_RS05220 IPR013196 Helix-turn-helix, type 11 JOS54_RS05220 IPR036388 Winged helix-like DNA-binding domain superfamily JOS54_RS05220 IPR013011 Phosphotransferase system, EIIB component, type 2 JOS54_RS05220 IPR011608 PRD domain JOS54_RS05230 IPR011060 Ribulose-phosphate binding barrel JOS54_RS05230 IPR000056 Ribulose-phosphate 3-epimerase-like JOS54_RS05230 IPR026019 Ribulose-phosphate 3-epimerase JOS54_RS05230 IPR013785 Aldolase-type TIM barrel JOS54_RS05235 IPR023214 HAD superfamily JOS54_RS05235 IPR006379 HAD-superfamily hydrolase, subfamily IIB JOS54_RS05235 IPR000150 Cof family JOS54_RS05235 IPR036412 HAD-like superfamily JOS54_RS05240 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA JOS54_RS05240 IPR039697 Iron-type alcohol dehydrogenase-like JOS54_RS05240 IPR018211 Alcohol dehydrogenase, iron-type, conserved site JOS54_RS05255 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type JOS54_RS05265 IPR003593 AAA+ ATPase domain JOS54_RS05265 IPR003439 ABC transporter-like JOS54_RS05265 IPR017871 ABC transporter, conserved site JOS54_RS05265 IPR008995 Molybdate/tungstate binding, C-terminal JOS54_RS05265 IPR040582 MalK, OB fold domain JOS54_RS05265 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS05265 IPR005116 Transport-associated OB, type 1 JOS54_RS05270 IPR035906 MetI-like superfamily JOS54_RS05270 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JOS54_RS05285 IPR036291 NAD(P)-binding domain superfamily JOS54_RS05285 IPR022616 Glycosyl hydrolase, family 4, C-terminal JOS54_RS05285 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal JOS54_RS05285 IPR019802 Glycoside hydrolase, family 4, conserved site JOS54_RS05285 IPR001088 Glycoside hydrolase, family 4 JOS54_RS05290 IPR028082 Periplasmic binding protein-like I JOS54_RS05290 IPR000843 LacI-type HTH domain JOS54_RS05290 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JOS54_RS05295 IPR000802 Arsenical pump membrane protein, ArsB JOS54_RS05295 IPR004680 Citrate transporter-like domain JOS54_RS05305 IPR006669 Magnesium transporter MgtE JOS54_RS05305 IPR006668 Magnesium transporter, MgtE intracellular domain JOS54_RS05305 IPR038076 MgtE, N-terminal domain superfamily JOS54_RS05305 IPR006667 SLC41 divalent cation transporters, integral membrane domain JOS54_RS05305 IPR000644 CBS domain JOS54_RS05305 IPR038048 Magnesium transporter MgtE, transmembrane domain JOS54_RS05305 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily JOS54_RS05320 IPR005519 Acid phosphatase, class B-like JOS54_RS05320 IPR036412 HAD-like superfamily JOS54_RS05320 IPR023214 HAD superfamily JOS54_RS05320 IPR006423 5-nucleotidase lipoprotein e(P4) JOS54_RS05325 IPR036441 Dehydroquinase, class II superfamily JOS54_RS05325 IPR018509 Dehydroquinase, class II, conserved site JOS54_RS05325 IPR001874 Dehydroquinase, class II JOS54_RS05330 IPR001986 Enolpyruvate transferase domain JOS54_RS05330 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta JOS54_RS05330 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site JOS54_RS05330 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase JOS54_RS05330 IPR036968 Enolpyruvate transferase domain superfamily JOS54_RS05335 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 JOS54_RS05335 IPR013785 Aldolase-type TIM barrel JOS54_RS05335 IPR006218 DAHP synthetase I/KDSA JOS54_RS05335 IPR041071 DAHP synthase ferredoxin-like domain JOS54_RS05340 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal JOS54_RS05340 IPR022893 Shikimate dehydrogenase family JOS54_RS05340 IPR011342 Shikimate dehydrogenase JOS54_RS05340 IPR036291 NAD(P)-binding domain superfamily JOS54_RS05345 IPR020541 Chorismate synthase, conserved site JOS54_RS05345 IPR035904 Chorismate synthase AroC superfamily JOS54_RS05345 IPR000453 Chorismate synthase JOS54_RS05350 IPR030963 3-dehydroquinate synthase family JOS54_RS05350 IPR030960 3-dehydroquinate synthase domain JOS54_RS05350 IPR016037 3-dehydroquinate synthase AroB JOS54_RS05355 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JOS54_RS05355 IPR001080 3Fe-4S ferredoxin JOS54_RS05355 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JOS54_RS05360 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily JOS54_RS05360 IPR013752 Ketopantoate reductase, C-terminal domain JOS54_RS05360 IPR003710 Ketopantoate reductase ApbA/PanE JOS54_RS05360 IPR013328 6-phosphogluconate dehydrogenase, domain 2 JOS54_RS05360 IPR013332 Ketopantoate reductase, N-terminal domain JOS54_RS05360 IPR036291 NAD(P)-binding domain superfamily JOS54_RS05380 IPR001626 ABC transporter, TroCD-like JOS54_RS05380 IPR037294 ABC transporter, BtuC-like JOS54_RS05385 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS05385 IPR003439 ABC transporter-like JOS54_RS05385 IPR017871 ABC transporter, conserved site JOS54_RS05385 IPR003593 AAA+ ATPase domain JOS54_RS05390 IPR006127 Periplasmic solute binding protein, ZnuA-like JOS54_RS05390 IPR006129 Adhesin B JOS54_RS05390 IPR006128 Adhesion lipoprotein JOS54_RS05415 IPR029044 Nucleotide-diphospho-sugar transferases JOS54_RS05425 IPR029062 Class I glutamine amidotransferase-like JOS54_RS05425 IPR002818 DJ-1/PfpI JOS54_RS05435 IPR029039 Flavoprotein-like superfamily JOS54_RS05435 IPR007329 FMN-binding JOS54_RS05435 IPR005025 NADPH-dependent FMN reductase-like JOS54_RS05435 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily JOS54_RS05435 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain JOS54_RS05435 IPR036188 FAD/NAD(P)-binding domain superfamily JOS54_RS05435 IPR010960 Flavocytochrome c JOS54_RS05440 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JOS54_RS05440 IPR007202 4Fe-4S domain JOS54_RS05440 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB JOS54_RS05440 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria JOS54_RS05440 IPR011005 Dihydropteroate synthase-like JOS54_RS05440 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JOS54_RS05450 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA JOS54_RS05450 IPR003667 NqrDE/RnfAE JOS54_RS05455 IPR003667 NqrDE/RnfAE JOS54_RS05455 IPR010968 Ion-translocating oxidoreductase complex subunit E JOS54_RS05465 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD JOS54_RS05465 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D JOS54_RS05470 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC JOS54_RS05470 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JOS54_RS05470 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain JOS54_RS05470 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JOS54_RS05470 IPR009051 Alpha-helical ferredoxin JOS54_RS05470 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily JOS54_RS05470 IPR019554 Soluble ligand binding domain JOS54_RS05470 IPR026902 RnfC Barrel sandwich hybrid domain JOS54_RS05480 IPR036188 FAD/NAD(P)-binding domain superfamily JOS54_RS05480 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain JOS54_RS05480 IPR007329 FMN-binding JOS54_RS05480 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily JOS54_RS05485 IPR002528 Multi antimicrobial extrusion protein JOS54_RS05490 IPR001672 Phosphoglucose isomerase (PGI) JOS54_RS05490 IPR018189 Phosphoglucose isomerase, conserved site JOS54_RS05490 IPR035476 Phosphoglucose isomerase, SIS domain 1 JOS54_RS05490 IPR035482 Phosphoglucose isomerase, SIS domain 2 JOS54_RS05495 IPR012340 Nucleic acid-binding, OB-fold JOS54_RS05495 IPR022967 RNA-binding domain, S1 JOS54_RS05495 IPR003029 S1 domain JOS54_RS05500 IPR034904 Fe-S cluster assembly domain superfamily JOS54_RS05500 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal JOS54_RS05505 IPR002549 Transmembrane protein TqsA-like JOS54_RS05510 IPR022631 S-adenosylmethionine synthetase, conserved site JOS54_RS05510 IPR022630 S-adenosylmethionine synthetase, C-terminal JOS54_RS05510 IPR002133 S-adenosylmethionine synthetase JOS54_RS05510 IPR022636 S-adenosylmethionine synthetase superfamily JOS54_RS05510 IPR022629 S-adenosylmethionine synthetase, central domain JOS54_RS05510 IPR022628 S-adenosylmethionine synthetase, N-terminal JOS54_RS05515 IPR036280 Multiheme cytochrome superfamily JOS54_RS05515 IPR010960 Flavocytochrome c JOS54_RS05515 IPR011031 Multihaem cytochrome JOS54_RS05515 IPR036188 FAD/NAD(P)-binding domain superfamily JOS54_RS05515 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily JOS54_RS05515 IPR012286 Tetrahaem cytochrome domain JOS54_RS05515 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain JOS54_RS05520 IPR023585 Isoleucine-tRNA ligase, type 1 JOS54_RS05520 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding JOS54_RS05520 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JOS54_RS05520 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding JOS54_RS05520 IPR010663 Zinc finger, FPG/IleRS-type JOS54_RS05520 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain JOS54_RS05520 IPR002301 Isoleucine-tRNA ligase JOS54_RS05520 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain JOS54_RS05520 IPR002300 Aminoacyl-tRNA synthetase, class Ia JOS54_RS05520 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JOS54_RS05535 IPR023052 Cell division protein SepF JOS54_RS05535 IPR038594 SepF-like superfamily JOS54_RS05535 IPR007561 Cell division protein SepF/SepF-related JOS54_RS05545 IPR003439 ABC transporter-like JOS54_RS05545 IPR017871 ABC transporter, conserved site JOS54_RS05545 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal JOS54_RS05545 IPR003593 AAA+ ATPase domain JOS54_RS05545 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS05550 IPR003439 ABC transporter-like JOS54_RS05550 IPR003593 AAA+ ATPase domain JOS54_RS05550 IPR017871 ABC transporter, conserved site JOS54_RS05550 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS05550 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal JOS54_RS05555 IPR035906 MetI-like superfamily JOS54_RS05555 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JOS54_RS05555 IPR025966 Oligopeptide transport permease C-like, N-terminal domain JOS54_RS05560 IPR035906 MetI-like superfamily JOS54_RS05560 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JOS54_RS05565 IPR000914 Solute-binding protein family 5 domain JOS54_RS05565 IPR023765 Solute-binding protein family 5, conserved site JOS54_RS05565 IPR039424 Solute-binding protein family 5 JOS54_RS05565 IPR030678 Peptide/nickel binding protein, MppA-type JOS54_RS05695 IPR036286 LexA/Signal peptidase-like superfamily JOS54_RS05695 IPR015927 Peptidase S24/S26A/S26B/S26C JOS54_RS05695 IPR006197 Peptidase S24, LexA-like JOS54_RS05695 IPR036390 Winged helix DNA-binding domain superfamily JOS54_RS05695 IPR036388 Winged helix-like DNA-binding domain superfamily JOS54_RS05695 IPR039418 LexA-like JOS54_RS05695 IPR006200 Transcription regulator LexA JOS54_RS05695 IPR006199 LexA repressor, DNA-binding domain JOS54_RS05705 IPR011010 DNA breaking-rejoining enzyme, catalytic core JOS54_RS05705 IPR013762 Integrase-like, catalytic domain superfamily JOS54_RS05705 IPR011931 Tyrosine recombinase XerC JOS54_RS05705 IPR010998 Integrase/recombinase, N-terminal JOS54_RS05705 IPR023009 Tyrosine recombinase XerC/XerD JOS54_RS05705 IPR004107 Integrase, SAM-like, N-terminal JOS54_RS05705 IPR002104 Integrase, catalytic domain JOS54_RS05725 IPR004101 Mur ligase, C-terminal JOS54_RS05725 IPR036615 Mur ligase, C-terminal domain superfamily JOS54_RS05725 IPR013221 Mur ligase, central JOS54_RS05725 IPR036565 Mur-like, catalytic domain superfamily JOS54_RS05725 IPR000713 Mur ligase, N-terminal catalytic domain JOS54_RS05725 IPR035911 MurE/MurF, N-terminal JOS54_RS05725 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase JOS54_RS05730 IPR000073 Alpha/beta hydrolase fold-1 JOS54_RS05730 IPR029058 Alpha/Beta hydrolase fold JOS54_RS05730 IPR000639 Epoxide hydrolase-like JOS54_RS05730 IPR023791 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase JOS54_RS05735 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JOS54_RS05735 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JOS54_RS05735 IPR003594 Histidine kinase/HSP90-like ATPase JOS54_RS05735 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JOS54_RS05735 IPR005467 Histidine kinase domain JOS54_RS05735 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JOS54_RS05735 IPR003660 HAMP domain JOS54_RS05740 IPR001867 OmpR/PhoB-type DNA-binding domain JOS54_RS05740 IPR039420 Transcriptional regulatory protein WalR-like JOS54_RS05740 IPR036388 Winged helix-like DNA-binding domain superfamily JOS54_RS05740 IPR016032 Signal transduction response regulator, C-terminal effector JOS54_RS05740 IPR001789 Signal transduction response regulator, receiver domain JOS54_RS05740 IPR011006 CheY-like superfamily JOS54_RS05745 IPR006352 Phosphoglucosamine mutase, bacterial type JOS54_RS05745 IPR005841 Alpha-D-phosphohexomutase superfamily JOS54_RS05745 IPR005843 Alpha-D-phosphohexomutase, C-terminal JOS54_RS05745 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III JOS54_RS05745 IPR016066 Alpha-D-phosphohexomutase, conserved site JOS54_RS05745 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I JOS54_RS05745 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily JOS54_RS05745 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III JOS54_RS05745 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II JOS54_RS05755 IPR003390 DNA integrity scanning protein, DisA, N-terminal JOS54_RS05755 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily JOS54_RS05755 IPR034701 Diadenylate cyclase CdaA JOS54_RS05755 IPR014046 Diadenylate cyclase JOS54_RS05770 IPR006119 Resolvase, N-terminal catalytic domain JOS54_RS05770 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily JOS54_RS05770 IPR006118 Recombinase, conserved site JOS54_RS05770 IPR006120 Resolvase, HTH domain JOS54_RS05910 IPR002941 DNA methylase N-4/N-6 JOS54_RS05910 IPR001091 Restriction/modification DNA-methylase JOS54_RS05910 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JOS54_RS05985 IPR035569 Antitoxin epsilon/PezA domain superfamily JOS54_RS05985 IPR001387 Cro/C1-type helix-turn-helix domain JOS54_RS05985 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JOS54_RS05990 IPR006200 Transcription regulator LexA JOS54_RS05990 IPR039418 LexA-like JOS54_RS05990 IPR036286 LexA/Signal peptidase-like superfamily JOS54_RS05990 IPR006199 LexA repressor, DNA-binding domain JOS54_RS05990 IPR006197 Peptidase S24, LexA-like JOS54_RS05990 IPR015927 Peptidase S24/S26A/S26B/S26C JOS54_RS05990 IPR036388 Winged helix-like DNA-binding domain superfamily JOS54_RS05990 IPR036390 Winged helix DNA-binding domain superfamily JOS54_RS05995 IPR011010 DNA breaking-rejoining enzyme, catalytic core JOS54_RS05995 IPR013762 Integrase-like, catalytic domain superfamily JOS54_RS05995 IPR004107 Integrase, SAM-like, N-terminal JOS54_RS05995 IPR010998 Integrase/recombinase, N-terminal JOS54_RS05995 IPR002104 Integrase, catalytic domain JOS54_RS06005 IPR029001 Inosine triphosphate pyrophosphatase-like JOS54_RS06005 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein JOS54_RS06010 IPR011004 Trimeric LpxA-like superfamily JOS54_RS06010 IPR038009 GlmU, C-terminal LbH domain JOS54_RS06010 IPR001451 Hexapeptide repeat JOS54_RS06010 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase JOS54_RS06010 IPR029044 Nucleotide-diphospho-sugar transferases JOS54_RS06010 IPR005835 Nucleotidyl transferase domain JOS54_RS06015 IPR006116 2-5-oligoadenylate synthetase, N-terminal JOS54_RS06035 IPR030390 RNA methyltransferase TrmA, active site JOS54_RS06035 IPR012340 Nucleic acid-binding, OB-fold JOS54_RS06035 IPR002792 TRAM domain JOS54_RS06035 IPR010280 (Uracil-5)-methyltransferase family JOS54_RS06035 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JOS54_RS06045 IPR011109 DNA-binding recombinase domain JOS54_RS06045 IPR038109 DNA-binding recombinase domain superfamily JOS54_RS06045 IPR006119 Resolvase, N-terminal catalytic domain JOS54_RS06045 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily JOS54_RS06075 IPR001387 Cro/C1-type helix-turn-helix domain JOS54_RS06075 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JOS54_RS06095 IPR000477 Reverse transcriptase domain JOS54_RS06095 IPR024937 Domain X JOS54_RS06105 IPR000055 Restriction endonuclease, type I, HsdS JOS54_RS06115 IPR023009 Tyrosine recombinase XerC/XerD JOS54_RS06115 IPR011931 Tyrosine recombinase XerC JOS54_RS06115 IPR004107 Integrase, SAM-like, N-terminal JOS54_RS06115 IPR010998 Integrase/recombinase, N-terminal JOS54_RS06115 IPR002104 Integrase, catalytic domain JOS54_RS06115 IPR013762 Integrase-like, catalytic domain superfamily JOS54_RS06115 IPR011010 DNA breaking-rejoining enzyme, catalytic core JOS54_RS06140 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal JOS54_RS06140 IPR004473 Restriction endonuclease, type I, HsdR JOS54_RS06140 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS06140 IPR014001 Helicase superfamily 1/2, ATP-binding domain JOS54_RS06140 IPR040980 SWI2/SNF2 ATPase JOS54_RS06140 IPR022625 Type-1 restriction enzyme R protein, C-terminal JOS54_RS06160 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JOS54_RS06160 IPR018117 DNA methylase, C-5 cytosine-specific, active site JOS54_RS06160 IPR001525 C-5 cytosine methyltransferase JOS54_RS06160 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site JOS54_RS06165 IPR034144 DNA topoisomerase 3-like, TOPRIM domain JOS54_RS06165 IPR006171 TOPRIM domain JOS54_RS06165 IPR005738 DNA topoisomerase III JOS54_RS06165 IPR003602 DNA topoisomerase, type IA, DNA-binding domain JOS54_RS06165 IPR023405 DNA topoisomerase, type IA, core domain JOS54_RS06165 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 JOS54_RS06165 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 JOS54_RS06165 IPR003601 DNA topoisomerase, type IA, domain 2 JOS54_RS06165 IPR000380 DNA topoisomerase, type IA JOS54_RS06165 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 JOS54_RS06165 IPR023406 DNA topoisomerase, type IA, active site JOS54_RS06165 IPR013497 DNA topoisomerase, type IA, central JOS54_RS06180 IPR036397 Ribonuclease H superfamily JOS54_RS06180 IPR012337 Ribonuclease H-like superfamily JOS54_RS06180 IPR001584 Integrase, catalytic core JOS54_RS06180 IPR009057 Homeobox-like domain superfamily JOS54_RS06180 IPR038965 Transposase InsF-like JOS54_RS06245 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS06245 IPR002611 IstB-like ATP-binding protein JOS54_RS06245 IPR003593 AAA+ ATPase domain JOS54_RS06255 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JOS54_RS06255 IPR016181 Acyl-CoA N-acyltransferase JOS54_RS06255 IPR029062 Class I glutamine amidotransferase-like JOS54_RS06255 IPR011257 DNA glycosylase JOS54_RS06255 IPR017926 Glutamine amidotransferase JOS54_RS06255 IPR001674 GMP synthase, C-terminal JOS54_RS06255 IPR025777 GMP synthetase ATP pyrophosphatase domain JOS54_RS06255 IPR000182 GNAT domain JOS54_RS06255 IPR005019 Methyladenine glycosylase JOS54_RS06270 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JOS54_RS06270 IPR012340 Nucleic acid-binding, OB-fold JOS54_RS06270 IPR002792 TRAM domain JOS54_RS06270 IPR010280 (Uracil-5)-methyltransferase family JOS54_RS06270 IPR030390 RNA methyltransferase TrmA, active site JOS54_RS06280 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic JOS54_RS06280 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E JOS54_RS06280 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit JOS54_RS06280 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like JOS54_RS06280 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 JOS54_RS06280 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 JOS54_RS06280 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site JOS54_RS06280 IPR018027 Asn/Gln amidotransferase JOS54_RS06280 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain JOS54_RS06285 IPR000120 Amidase JOS54_RS06285 IPR020556 Amidase, conserved site JOS54_RS06285 IPR036928 Amidase signature (AS) superfamily JOS54_RS06285 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit JOS54_RS06285 IPR023631 Amidase signature domain JOS54_RS06295 IPR013839 NAD-dependent DNA ligase, adenylation JOS54_RS06295 IPR036420 BRCT domain superfamily JOS54_RS06295 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 JOS54_RS06295 IPR012340 Nucleic acid-binding, OB-fold JOS54_RS06295 IPR001679 NAD-dependent DNA ligase JOS54_RS06295 IPR004150 NAD-dependent DNA ligase, OB-fold JOS54_RS06295 IPR010994 RuvA domain 2-like JOS54_RS06295 IPR001357 BRCT domain JOS54_RS06295 IPR041663 DisA/LigA, helix-hairpin-helix motif JOS54_RS06295 IPR013840 NAD-dependent DNA ligase, N-terminal JOS54_RS06300 IPR000212 DNA helicase, UvrD/REP type JOS54_RS06300 IPR005751 ATP-dependent DNA helicase PcrA JOS54_RS06300 IPR013986 DExx box DNA helicase domain superfamily JOS54_RS06300 IPR014017 UvrD-like DNA helicase, C-terminal JOS54_RS06300 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS06300 IPR014016 UvrD-like helicase, ATP-binding domain JOS54_RS06300 IPR034739 UvrD/AddA helicase, N-terminal JOS54_RS06305 IPR004114 THUMP domain JOS54_RS06305 IPR000241 Putative RNA methylase domain JOS54_RS06305 IPR002052 DNA methylase, N-6 adenine-specific, conserved site JOS54_RS06305 IPR017244 Ribosomal RNA large subunit methyltransferase K/L JOS54_RS06305 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JOS54_RS06305 IPR019614 S-adenosylmethionine-dependent methyltransferase JOS54_RS06310 IPR036986 RNA-binding S4 domain superfamily JOS54_RS06310 IPR006145 Pseudouridine synthase, RsuA/RluA JOS54_RS06310 IPR002942 RNA-binding S4 domain JOS54_RS06310 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site JOS54_RS06310 IPR006225 Pseudouridine synthase, RluC/RluD JOS54_RS06310 IPR020103 Pseudouridine synthase, catalytic domain superfamily JOS54_RS06325 IPR022924 Cardiolipin synthase JOS54_RS06325 IPR001736 Phospholipase D/Transphosphatidylase JOS54_RS06325 IPR025202 Phospholipase D-like domain JOS54_RS06345 IPR022463 Fructose 1-phosphate kinase JOS54_RS06345 IPR029056 Ribokinase-like JOS54_RS06345 IPR017583 Tagatose/fructose phosphokinase JOS54_RS06345 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site JOS54_RS06345 IPR011611 Carbohydrate kinase PfkB JOS54_RS06350 IPR036264 Bacterial exopeptidase dimerisation domain JOS54_RS06350 IPR002933 Peptidase M20 JOS54_RS06350 IPR011650 Peptidase M20, dimerisation domain JOS54_RS06350 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site JOS54_RS06350 IPR010161 Peptidase M20B, tripeptide aminopeptidase JOS54_RS06355 IPR005225 Small GTP-binding protein domain JOS54_RS06355 IPR000795 Transcription factor, GTP-binding domain JOS54_RS06355 IPR009000 Translation protein, beta-barrel domain superfamily JOS54_RS06355 IPR042116 GTP-binding protein TypA/BipA, C-terminal JOS54_RS06355 IPR006298 GTP-binding protein TypA JOS54_RS06355 IPR035647 EF-G domain III/V-like JOS54_RS06355 IPR004161 Translation elongation factor EFTu-like, domain 2 JOS54_RS06355 IPR000640 Elongation factor EFG, domain V-like JOS54_RS06355 IPR031157 Tr-type G domain, conserved site JOS54_RS06355 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS06355 IPR035651 BipA, domain V JOS54_RS06365 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS06365 IPR003495 CobW/HypB/UreG, nucleotide-binding domain JOS54_RS06365 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal JOS54_RS06375 IPR019819 Carboxylesterase type B, conserved site JOS54_RS06375 IPR029058 Alpha/Beta hydrolase fold JOS54_RS06375 IPR002018 Carboxylesterase, type B JOS54_RS06375 IPR019826 Carboxylesterase type B, active site JOS54_RS06375 IPR000997 Cholinesterase JOS54_RS06395 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site JOS54_RS06395 IPR001608 Alanine racemase, N-terminal JOS54_RS06395 IPR011079 Alanine racemase, C-terminal JOS54_RS06395 IPR029066 PLP-binding barrel JOS54_RS06395 IPR000821 Alanine racemase JOS54_RS06395 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal JOS54_RS06415 IPR036390 Winged helix DNA-binding domain superfamily JOS54_RS06415 IPR036388 Winged helix-like DNA-binding domain superfamily JOS54_RS06415 IPR000847 Transcription regulator HTH, LysR JOS54_RS06415 IPR005119 LysR, substrate-binding JOS54_RS06420 IPR039421 Type I protein exporter JOS54_RS06420 IPR003593 AAA+ ATPase domain JOS54_RS06420 IPR017871 ABC transporter, conserved site JOS54_RS06420 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS06420 IPR003439 ABC transporter-like JOS54_RS06420 IPR036640 ABC transporter type 1, transmembrane domain superfamily JOS54_RS06420 IPR011527 ABC transporter type 1, transmembrane domain JOS54_RS06425 IPR003593 AAA+ ATPase domain JOS54_RS06425 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS06425 IPR003439 ABC transporter-like JOS54_RS06425 IPR036640 ABC transporter type 1, transmembrane domain superfamily JOS54_RS06425 IPR011527 ABC transporter type 1, transmembrane domain JOS54_RS06425 IPR039421 Type I protein exporter JOS54_RS06460 IPR023648 Copper homeostasis CutC domain JOS54_RS06460 IPR036822 Copper homeostasis (CutC) domain superfamily JOS54_RS06460 IPR005627 Copper homeostasis protein CutC JOS54_RS06465 IPR000246 Peptidase T2, asparaginase 2 JOS54_RS06465 IPR029055 Nucleophile aminohydrolases, N-terminal JOS54_RS06465 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal JOS54_RS06470 IPR019264 Domain of unknown function DUF2179 JOS54_RS06470 IPR003740 Uncharacterised membrane protein YitT JOS54_RS06470 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal JOS54_RS06480 IPR000644 CBS domain JOS54_RS06480 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily JOS54_RS06480 IPR006667 SLC41 divalent cation transporters, integral membrane domain JOS54_RS06480 IPR006668 Magnesium transporter, MgtE intracellular domain JOS54_RS06480 IPR006669 Magnesium transporter MgtE JOS54_RS06480 IPR038076 MgtE, N-terminal domain superfamily JOS54_RS06480 IPR038048 Magnesium transporter MgtE, transmembrane domain JOS54_RS06490 IPR036264 Bacterial exopeptidase dimerisation domain JOS54_RS06490 IPR010964 Peptidase M20A, peptidase V-related JOS54_RS06490 IPR002933 Peptidase M20 JOS54_RS06490 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site JOS54_RS06495 IPR023367 Peptidase M42, domain 2 JOS54_RS06495 IPR008007 Peptidase M42 JOS54_RS06510 IPR004796 Phosphotransferase system, cellobiose-type IIC component JOS54_RS06510 IPR004501 Phosphotransferase system, EIIC component, type 3 JOS54_RS06510 IPR003352 Phosphotransferase system, EIIC JOS54_RS06515 IPR013012 Phosphotransferase system, EIIB component, type 3 JOS54_RS06515 IPR036095 PTS system IIB component-like superfamily JOS54_RS06515 IPR003501 Phosphotransferase system, EIIB component, type 2/3 JOS54_RS06525 IPR040980 SWI2/SNF2 ATPase JOS54_RS06525 IPR004473 Restriction endonuclease, type I, HsdR JOS54_RS06525 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal JOS54_RS06525 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS06525 IPR022625 Type-1 restriction enzyme R protein, C-terminal JOS54_RS06525 IPR014001 Helicase superfamily 1/2, ATP-binding domain JOS54_RS06530 IPR000055 Restriction endonuclease, type I, HsdS JOS54_RS06535 IPR000055 Restriction endonuclease, type I, HsdS JOS54_RS06555 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily JOS54_RS06555 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain JOS54_RS06555 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JOS54_RS06555 IPR004546 Restriction endonuclease, type I, HsdM JOS54_RS06555 IPR002052 DNA methylase, N-6 adenine-specific, conserved site JOS54_RS06555 IPR003356 DNA methylase, adenine-specific JOS54_RS06605 IPR002052 DNA methylase, N-6 adenine-specific, conserved site JOS54_RS06605 IPR003356 DNA methylase, adenine-specific JOS54_RS06605 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JOS54_RS06665 IPR012337 Ribonuclease H-like superfamily JOS54_RS06665 IPR025948 HTH-like domain JOS54_RS06665 IPR036397 Ribonuclease H superfamily JOS54_RS06665 IPR038965 Transposase InsF-like JOS54_RS06665 IPR001584 Integrase, catalytic core JOS54_RS06695 IPR025777 GMP synthetase ATP pyrophosphatase domain JOS54_RS06695 IPR029062 Class I glutamine amidotransferase-like JOS54_RS06695 IPR022955 GMP synthase JOS54_RS06695 IPR001674 GMP synthase, C-terminal JOS54_RS06695 IPR004739 GMP synthase, glutamine amidotransferase JOS54_RS06695 IPR022310 NAD/GMP synthase JOS54_RS06695 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JOS54_RS06695 IPR017926 Glutamine amidotransferase JOS54_RS06700 IPR004872 Lipoprotein NlpA family JOS54_RS06705 IPR035906 MetI-like superfamily JOS54_RS06705 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JOS54_RS06710 IPR003439 ABC transporter-like JOS54_RS06710 IPR003593 AAA+ ATPase domain JOS54_RS06710 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal JOS54_RS06710 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain JOS54_RS06710 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS06710 IPR018449 NIL domain JOS54_RS06710 IPR017871 ABC transporter, conserved site JOS54_RS06715 IPR036873 Rhodanese-like domain superfamily JOS54_RS06715 IPR023695 Thiosulfate sulfurtransferase, bacterial JOS54_RS06715 IPR001763 Rhodanese-like domain JOS54_RS06720 IPR003824 Undecaprenyl-diphosphatase UppP JOS54_RS06725 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase JOS54_RS06725 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site JOS54_RS06725 IPR029000 Cyclophilin-like domain superfamily JOS54_RS06725 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain JOS54_RS06735 IPR000119 Histone-like DNA-binding protein JOS54_RS06735 IPR020816 Histone-like DNA-binding protein, conserved site JOS54_RS06735 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily JOS54_RS06750 IPR011268 Purine nucleoside phosphorylase JOS54_RS06750 IPR018099 Purine phosphorylase, family 2, conserved site JOS54_RS06750 IPR000845 Nucleoside phosphorylase domain JOS54_RS06750 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific JOS54_RS06750 IPR035994 Nucleoside phosphorylase superfamily JOS54_RS06755 IPR000845 Nucleoside phosphorylase domain JOS54_RS06755 IPR010049 MTA/SAH nucleosidase JOS54_RS06755 IPR035994 Nucleoside phosphorylase superfamily JOS54_RS06760 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding JOS54_RS06760 IPR009016 Iron hydrogenase JOS54_RS06760 IPR003149 Iron hydrogenase, small subunit JOS54_RS06760 IPR004108 Iron hydrogenase, large subunit, C-terminal JOS54_RS06760 IPR036010 2Fe-2S ferredoxin-like superfamily JOS54_RS06760 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain JOS54_RS06760 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JOS54_RS06760 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JOS54_RS06760 IPR036991 Iron hydrogenase, small subunit superfamily JOS54_RS06760 IPR013352 Iron hydrogenase, subset JOS54_RS06765 IPR003593 AAA+ ATPase domain JOS54_RS06765 IPR003439 ABC transporter-like JOS54_RS06765 IPR017871 ABC transporter, conserved site JOS54_RS06765 IPR008995 Molybdate/tungstate binding, C-terminal JOS54_RS06765 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS06765 IPR013611 Transport-associated OB, type 2 JOS54_RS06765 IPR015853 ABC transporter, ferric cation import, FbpC JOS54_RS06790 IPR020946 Flavin monooxygenase-like JOS54_RS06790 IPR036188 FAD/NAD(P)-binding domain superfamily JOS54_RS06805 IPR002933 Peptidase M20 JOS54_RS06805 IPR010964 Peptidase M20A, peptidase V-related JOS54_RS06805 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site JOS54_RS06805 IPR036264 Bacterial exopeptidase dimerisation domain JOS54_RS06810 IPR005135 Endonuclease/exonuclease/phosphatase JOS54_RS06810 IPR036691 Endonuclease/exonuclease/phosphatase superfamily JOS54_RS06810 IPR020848 AP endonuclease 1, conserved site JOS54_RS06810 IPR020847 AP endonuclease 1, binding site JOS54_RS06810 IPR004808 AP endonuclease 1 JOS54_RS06815 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal JOS54_RS06815 IPR036005 Creatinase/aminopeptidase-like JOS54_RS06815 IPR000587 Creatinase, N-terminal JOS54_RS06815 IPR000994 Peptidase M24 JOS54_RS06815 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site JOS54_RS06825 IPR022925 NADH pyrophosphatase NudC JOS54_RS06825 IPR020476 NUDIX hydrolase JOS54_RS06825 IPR015797 NUDIX hydrolase-like domain superfamily JOS54_RS06825 IPR020084 NUDIX hydrolase, conserved site JOS54_RS06825 IPR015376 Zinc ribbon, NADH pyrophosphatase JOS54_RS06825 IPR000086 NUDIX hydrolase domain JOS54_RS06835 IPR000185 Protein translocase subunit SecA JOS54_RS06835 IPR036266 SecA, Wing/Scaffold superfamily JOS54_RS06835 IPR011116 SecA Wing/Scaffold JOS54_RS06835 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS06835 IPR004027 SEC-C motif JOS54_RS06835 IPR036670 SecA, preprotein cross-linking domain superfamily JOS54_RS06835 IPR011130 SecA, preprotein cross-linking domain JOS54_RS06835 IPR014018 SecA motor DEAD JOS54_RS06835 IPR011115 SecA DEAD-like, N-terminal JOS54_RS06835 IPR020937 SecA conserved site JOS54_RS06840 IPR005764 Adenine phosphoribosyl transferase JOS54_RS06840 IPR000836 Phosphoribosyltransferase domain JOS54_RS06840 IPR029057 Phosphoribosyltransferase-like JOS54_RS06850 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JOS54_RS06850 IPR034683 Cytidylyltransferase IspD/TarI JOS54_RS06850 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site JOS54_RS06850 IPR029044 Nucleotide-diphospho-sugar transferases JOS54_RS06870 IPR036388 Winged helix-like DNA-binding domain superfamily JOS54_RS06870 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily JOS54_RS06870 IPR023546 Methylated-DNA--protein-cysteine methyltransferase JOS54_RS06870 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding JOS54_RS06870 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain JOS54_RS06870 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain JOS54_RS06870 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site JOS54_RS06880 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS06880 IPR003439 ABC transporter-like JOS54_RS06880 IPR017871 ABC transporter, conserved site JOS54_RS06880 IPR011527 ABC transporter type 1, transmembrane domain JOS54_RS06880 IPR003593 AAA+ ATPase domain JOS54_RS06880 IPR036640 ABC transporter type 1, transmembrane domain superfamily JOS54_RS06880 IPR039421 Type I protein exporter JOS54_RS06885 IPR039421 Type I protein exporter JOS54_RS06885 IPR017871 ABC transporter, conserved site JOS54_RS06885 IPR036640 ABC transporter type 1, transmembrane domain superfamily JOS54_RS06885 IPR003593 AAA+ ATPase domain JOS54_RS06885 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS06885 IPR011527 ABC transporter type 1, transmembrane domain JOS54_RS06885 IPR003439 ABC transporter-like JOS54_RS06890 IPR026345 Adhesin isopeptide-forming adherence domain JOS54_RS06890 IPR013574 Glucan-binding protein C/Surface antigen I/II, V-domain JOS54_RS06890 IPR019948 Gram-positive LPXTG cell wall anchor JOS54_RS06890 IPR019931 LPXTG cell wall anchor domain JOS54_RS06890 IPR041324 Antigen I/II N-terminal JOS54_RS06890 IPR009578 Cell surface antigen repeat JOS54_RS06890 IPR032300 Cell surface antigen, C-terminal JOS54_RS06890 IPR021197 Cross-wall-targeting lipoprotein motif JOS54_RS06890 IPR036234 Glucan-binding protein C/Surface antigen I/II, V-domain superfamily JOS54_RS06895 IPR002569 Peptide methionine sulphoxide reductase MsrA JOS54_RS06895 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily JOS54_RS06900 IPR032639 Tex protein, YqgF-like domain JOS54_RS06900 IPR037027 YqgF/RNase H-like domain superfamily JOS54_RS06900 IPR041692 HHH domain 9 JOS54_RS06900 IPR012340 Nucleic acid-binding, OB-fold JOS54_RS06900 IPR012337 Ribonuclease H-like superfamily JOS54_RS06900 IPR010994 RuvA domain 2-like JOS54_RS06900 IPR022967 RNA-binding domain, S1 JOS54_RS06900 IPR003029 S1 domain JOS54_RS06900 IPR023323 Tex-like domain superfamily JOS54_RS06900 IPR023319 Tex-like protein, HTH domain superfamily JOS54_RS06900 IPR018974 Tex-like protein, N-terminal JOS54_RS06900 IPR006641 YqgF/RNase H-like domain JOS54_RS06905 IPR018080 Band 7/stomatin-like, conserved site JOS54_RS06905 IPR001107 Band 7 domain JOS54_RS06905 IPR036013 Band 7/SPFH domain superfamily JOS54_RS06905 IPR001972 Stomatin family JOS54_RS06920 IPR041527 YhcG, N-terminal JOS54_RS06920 IPR009362 YhcG PDDEXK nuclease domain JOS54_RS06925 IPR012337 Ribonuclease H-like superfamily JOS54_RS06925 IPR025948 HTH-like domain JOS54_RS06925 IPR038965 Transposase InsF-like JOS54_RS06925 IPR001584 Integrase, catalytic core JOS54_RS06925 IPR036397 Ribonuclease H superfamily JOS54_RS06930 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS06930 IPR038729 Rad50/SbcC-type AAA domain JOS54_RS06935 IPR004593 Nuclease SbcCD subunit D JOS54_RS06935 IPR026843 Nuclease SbcCD subunit D, C-terminal domain JOS54_RS06935 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type JOS54_RS06935 IPR029052 Metallo-dependent phosphatase-like JOS54_RS06935 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain JOS54_RS06960 IPR023358 Peptidase M18, domain 2 JOS54_RS06960 IPR001948 Peptidase M18 JOS54_RS06960 IPR022984 M18 family aminopeptidase 2, putative JOS54_RS06965 IPR000787 Peptidase M29 JOS54_RS06965 IPR035097 Peptidase M29, N-terminal JOS54_RS07000 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II JOS54_RS07000 IPR029061 Thiamin diphosphate-binding fold JOS54_RS07000 IPR005475 Transketolase-like, pyrimidine-binding domain JOS54_RS07000 IPR033248 Transketolase, C-terminal domain JOS54_RS07005 IPR005474 Transketolase, N-terminal JOS54_RS07005 IPR029061 Thiamin diphosphate-binding fold JOS54_RS07010 IPR027022 ABC transporter permease protein, BceB-type JOS54_RS07010 IPR003838 ABC transporter permease protein domain JOS54_RS07015 IPR017871 ABC transporter, conserved site JOS54_RS07015 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS07015 IPR003439 ABC transporter-like JOS54_RS07015 IPR003593 AAA+ ATPase domain JOS54_RS07020 IPR003594 Histidine kinase/HSP90-like ATPase JOS54_RS07020 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JOS54_RS07020 IPR005467 Histidine kinase domain JOS54_RS07020 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JOS54_RS07025 IPR036388 Winged helix-like DNA-binding domain superfamily JOS54_RS07025 IPR001789 Signal transduction response regulator, receiver domain JOS54_RS07025 IPR039420 Transcriptional regulatory protein WalR-like JOS54_RS07025 IPR001867 OmpR/PhoB-type DNA-binding domain JOS54_RS07025 IPR016032 Signal transduction response regulator, C-terminal effector JOS54_RS07025 IPR011006 CheY-like superfamily JOS54_RS07035 IPR011006 CheY-like superfamily JOS54_RS07035 IPR001867 OmpR/PhoB-type DNA-binding domain JOS54_RS07035 IPR016032 Signal transduction response regulator, C-terminal effector JOS54_RS07035 IPR001789 Signal transduction response regulator, receiver domain JOS54_RS07035 IPR039420 Transcriptional regulatory protein WalR-like JOS54_RS07035 IPR036388 Winged helix-like DNA-binding domain superfamily JOS54_RS07045 IPR013137 Zinc finger, TFIIB-type JOS54_RS07055 IPR002935 Class I-like SAM-dependent O-methyltransferase JOS54_RS07055 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JOS54_RS07070 IPR001613 Flavin amine oxidase JOS54_RS07070 IPR036188 FAD/NAD(P)-binding domain superfamily JOS54_RS07070 IPR002937 Amine oxidase JOS54_RS07070 IPR006311 Twin-arginine translocation pathway, signal sequence JOS54_RS07075 IPR036388 Winged helix-like DNA-binding domain superfamily JOS54_RS07075 IPR000600 ROK family JOS54_RS07075 IPR036390 Winged helix DNA-binding domain superfamily JOS54_RS07085 IPR008040 Hydantoinaseoxoprolinase, N-terminal JOS54_RS07085 IPR002821 Hydantoinase A/oxoprolinase JOS54_RS07095 IPR013785 Aldolase-type TIM barrel JOS54_RS07095 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase JOS54_RS07095 IPR011060 Ribulose-phosphate binding barrel JOS54_RS07100 IPR000600 ROK family JOS54_RS07105 IPR042122 Serine acetyltransferase, N-terminal domain superfamily JOS54_RS07105 IPR011004 Trimeric LpxA-like superfamily JOS54_RS07105 IPR001451 Hexapeptide repeat JOS54_RS07110 IPR005856 Cysteine synthase JOS54_RS07110 IPR005859 Cysteine synthase CysK JOS54_RS07110 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme JOS54_RS07110 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site JOS54_RS07110 IPR001926 Pyridoxal-phosphate dependent enzyme JOS54_RS07115 IPR000456 Ribosomal protein L17 JOS54_RS07115 IPR036373 Ribosomal protein L17 superfamily JOS54_RS07120 IPR036603 RNA polymerase, RBP11-like subunit JOS54_RS07120 IPR011262 DNA-directed RNA polymerase, insert domain JOS54_RS07120 IPR011773 DNA-directed RNA polymerase, alpha subunit JOS54_RS07120 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type JOS54_RS07120 IPR011260 RNA polymerase, alpha subunit, C-terminal JOS54_RS07120 IPR036643 DNA-directed RNA polymerase, insert domain superfamily JOS54_RS07125 IPR036967 Ribosomal protein S11 superfamily JOS54_RS07125 IPR018102 Ribosomal S11, conserved site JOS54_RS07125 IPR019981 Ribosomal protein S11, bacterial-type JOS54_RS07125 IPR001971 Ribosomal protein S11 JOS54_RS07130 IPR027437 30s ribosomal protein S13, C-terminal JOS54_RS07130 IPR019980 Ribosomal protein S13, bacterial-type JOS54_RS07130 IPR001892 Ribosomal protein S13 JOS54_RS07130 IPR018269 Ribosomal protein S13, conserved site JOS54_RS07130 IPR010979 Ribosomal protein S13-like, H2TH JOS54_RS07135 IPR035977 Ribosomal protein L36 superfamily JOS54_RS07135 IPR000473 Ribosomal protein L36 JOS54_RS07140 IPR012340 Nucleic acid-binding, OB-fold JOS54_RS07140 IPR006196 RNA-binding domain, S1, IF1 type JOS54_RS07140 IPR004368 Translation initiation factor IF-1 JOS54_RS07140 IPR022967 RNA-binding domain, S1 JOS54_RS07145 IPR033690 Adenylate kinase, conserved site JOS54_RS07145 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS07145 IPR000850 Adenylate kinase/UMP-CMP kinase JOS54_RS07145 IPR006259 Adenylate kinase subfamily JOS54_RS07145 IPR007862 Adenylate kinase, active site lid domain JOS54_RS07150 IPR030659 SecY conserved site JOS54_RS07150 IPR023201 SecY domain superfamily JOS54_RS07150 IPR002208 SecY/SEC61-alpha family JOS54_RS07150 IPR026593 Protein translocase subunit SecY JOS54_RS07155 IPR030878 Ribosomal protein L15 JOS54_RS07155 IPR021131 Ribosomal protein L18e/L15P JOS54_RS07155 IPR001196 Ribosomal protein L15, conserved site JOS54_RS07155 IPR005749 Ribosomal protein L15, bacterial-type JOS54_RS07155 IPR036227 Ribosomal L18e/L15P superfamily JOS54_RS07160 IPR005712 Ribosomal protein S5, bacterial-type JOS54_RS07160 IPR005324 Ribosomal protein S5, C-terminal JOS54_RS07160 IPR020568 Ribosomal protein S5 domain 2-type fold JOS54_RS07160 IPR013810 Ribosomal protein S5, N-terminal JOS54_RS07160 IPR018192 Ribosomal protein S5, N-terminal, conserved site JOS54_RS07160 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JOS54_RS07160 IPR000851 Ribosomal protein S5 JOS54_RS07165 IPR005484 Ribosomal protein L18 JOS54_RS07165 IPR004389 Ribosomal protein L18, bacterial-type JOS54_RS07170 IPR002358 Ribosomal protein L6, conserved site JOS54_RS07170 IPR019906 Ribosomal protein L6, bacterial-type JOS54_RS07170 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily JOS54_RS07170 IPR000702 Ribosomal protein L6 JOS54_RS07170 IPR020040 Ribosomal protein L6, alpha-beta domain JOS54_RS07175 IPR000630 Ribosomal protein S8 JOS54_RS07175 IPR035987 Ribosomal protein S8 superfamily JOS54_RS07180 IPR023053 Ribosomal protein S14, type Z JOS54_RS07180 IPR001209 Ribosomal protein S14 JOS54_RS07185 IPR031309 Ribosomal protein L5, C-terminal JOS54_RS07185 IPR020930 Ribosomal protein L5, bacterial-type JOS54_RS07185 IPR020929 Ribosomal protein L5, conserved site JOS54_RS07185 IPR022803 Ribosomal protein L5 domain superfamily JOS54_RS07185 IPR031310 Ribosomal protein L5, N-terminal JOS54_RS07185 IPR002132 Ribosomal protein L5 JOS54_RS07190 IPR005825 Ribosomal protein L24/L26, conserved site JOS54_RS07190 IPR014722 Ribosomal protein L2, domain 2 JOS54_RS07190 IPR041988 Ribosomal Protein L26/L24, KOW domain JOS54_RS07190 IPR008991 Translation protein SH3-like domain superfamily JOS54_RS07190 IPR005824 KOW JOS54_RS07190 IPR003256 Ribosomal protein L24 JOS54_RS07195 IPR036853 Ribosomal protein L14 superfamily JOS54_RS07195 IPR000218 Ribosomal protein L14P JOS54_RS07195 IPR019972 Ribosomal protein L14P, conserved site JOS54_RS07195 IPR005745 Ribosomal protein L14P, bacterial-type JOS54_RS07200 IPR019979 Ribosomal protein S17, conserved site JOS54_RS07200 IPR000266 Ribosomal protein S17/S11 JOS54_RS07200 IPR019984 30S ribosomal protein S17 JOS54_RS07200 IPR012340 Nucleic acid-binding, OB-fold JOS54_RS07205 IPR001854 Ribosomal protein L29/L35 JOS54_RS07205 IPR036049 Ribosomal protein L29/L35 superfamily JOS54_RS07205 IPR018254 Ribosomal protein L29, conserved site JOS54_RS07210 IPR016180 Ribosomal protein L10e/L16 JOS54_RS07210 IPR000114 Ribosomal protein L16 JOS54_RS07210 IPR020798 Ribosomal protein L16, conserved site JOS54_RS07210 IPR036920 Ribosomal protein L10e/L16 superfamily JOS54_RS07215 IPR036419 Ribosomal protein S3, C-terminal domain superfamily JOS54_RS07215 IPR005704 Ribosomal protein S3, bacterial-type JOS54_RS07215 IPR009019 K homology domain superfamily, prokaryotic type JOS54_RS07215 IPR004044 K Homology domain, type 2 JOS54_RS07215 IPR015946 K homology domain-like, alpha/beta JOS54_RS07215 IPR004087 K Homology domain JOS54_RS07215 IPR018280 Ribosomal protein S3, conserved site JOS54_RS07215 IPR001351 Ribosomal protein S3, C-terminal JOS54_RS07220 IPR001063 Ribosomal protein L22/L17 JOS54_RS07220 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type JOS54_RS07220 IPR036394 Ribosomal protein L22/L17 superfamily JOS54_RS07225 IPR005732 Ribosomal protein S19, bacterial-type JOS54_RS07225 IPR002222 Ribosomal protein S19/S15 JOS54_RS07225 IPR020934 Ribosomal protein S19 conserved site JOS54_RS07225 IPR023575 Ribosomal protein S19, superfamily JOS54_RS07230 IPR014726 Ribosomal protein L2, domain 3 JOS54_RS07230 IPR008991 Translation protein SH3-like domain superfamily JOS54_RS07230 IPR022671 Ribosomal protein L2, conserved site JOS54_RS07230 IPR005880 Ribosomal protein L2, bacterial/organellar-type JOS54_RS07230 IPR022669 Ribosomal protein L2, C-terminal JOS54_RS07230 IPR014722 Ribosomal protein L2, domain 2 JOS54_RS07230 IPR022666 Ribosomal Proteins L2, RNA binding domain JOS54_RS07230 IPR002171 Ribosomal protein L2 JOS54_RS07230 IPR012340 Nucleic acid-binding, OB-fold JOS54_RS07235 IPR013025 Ribosomal protein L25/L23 JOS54_RS07235 IPR012678 Ribosomal protein L23/L15e core domain superfamily JOS54_RS07235 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily JOS54_RS07240 IPR013005 50S ribosomal protein uL4 JOS54_RS07240 IPR023574 Ribosomal protein L4 domain superfamily JOS54_RS07240 IPR002136 Ribosomal protein L4/L1e JOS54_RS07245 IPR000597 Ribosomal protein L3 JOS54_RS07245 IPR009000 Translation protein, beta-barrel domain superfamily JOS54_RS07245 IPR019927 Ribosomal protein L3, bacterial/organelle-type JOS54_RS07245 IPR019926 Ribosomal protein L3, conserved site JOS54_RS07250 IPR036838 Ribosomal protein S10 domain superfamily JOS54_RS07250 IPR027486 Ribosomal protein S10 domain JOS54_RS07250 IPR001848 Ribosomal protein S10 JOS54_RS07250 IPR018268 Ribosomal protein S10, conserved site JOS54_RS07265 IPR006439 HAD hydrolase, subfamily IA JOS54_RS07265 IPR036412 HAD-like superfamily JOS54_RS07265 IPR041492 Haloacid dehalogenase-like hydrolase JOS54_RS07265 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB JOS54_RS07265 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JOS54_RS07265 IPR023214 HAD superfamily JOS54_RS07270 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ-like JOS54_RS07270 IPR013785 Aldolase-type TIM barrel JOS54_RS07270 IPR023435 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit KbaZ JOS54_RS07285 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component JOS54_RS07290 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit JOS54_RS07295 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup JOS54_RS07295 IPR004720 Phosphotransferase system, sorbose subfamily IIB component JOS54_RS07295 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily JOS54_RS07310 IPR035464 AgaS, SIS domain JOS54_RS07310 IPR001347 Sugar isomerase (SIS) JOS54_RS07310 IPR035466 GlmS/AgaS, SIS domain 1 JOS54_RS07315 IPR011059 Metal-dependent hydrolase, composite domain superfamily JOS54_RS07315 IPR032466 Metal-dependent hydrolase JOS54_RS07315 IPR003764 N-acetylglucosamine-6-phosphate deacetylase JOS54_RS07315 IPR006680 Amidohydrolase-related JOS54_RS07325 IPR033720 Elongation factor Tu, domain 2 JOS54_RS07325 IPR009000 Translation protein, beta-barrel domain superfamily JOS54_RS07325 IPR000795 Transcription factor, GTP-binding domain JOS54_RS07325 IPR005225 Small GTP-binding protein domain JOS54_RS07325 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle JOS54_RS07325 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal JOS54_RS07325 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS07325 IPR031157 Tr-type G domain, conserved site JOS54_RS07325 IPR004161 Translation elongation factor EFTu-like, domain 2 JOS54_RS07325 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal JOS54_RS07325 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain JOS54_RS07330 IPR005517 Translation elongation factor EFG/EF2, domain IV JOS54_RS07330 IPR031157 Tr-type G domain, conserved site JOS54_RS07330 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS07330 IPR020568 Ribosomal protein S5 domain 2-type fold JOS54_RS07330 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JOS54_RS07330 IPR005225 Small GTP-binding protein domain JOS54_RS07330 IPR000795 Transcription factor, GTP-binding domain JOS54_RS07330 IPR009022 Elongation factor G, domain III JOS54_RS07330 IPR009000 Translation protein, beta-barrel domain superfamily JOS54_RS07330 IPR035647 EF-G domain III/V-like JOS54_RS07330 IPR035649 EFG, domain V JOS54_RS07330 IPR041095 Elongation Factor G, domain II JOS54_RS07330 IPR004540 Translation elongation factor EFG/EF2 JOS54_RS07330 IPR004161 Translation elongation factor EFTu-like, domain 2 JOS54_RS07330 IPR000640 Elongation factor EFG, domain V-like JOS54_RS07335 IPR036823 Ribosomal protein S7 domain superfamily JOS54_RS07335 IPR020606 Ribosomal protein S7, conserved site JOS54_RS07335 IPR023798 Ribosomal protein S7 domain JOS54_RS07335 IPR000235 Ribosomal protein S5/S7 JOS54_RS07335 IPR005717 Ribosomal protein S7, bacterial/organellar-type JOS54_RS07340 IPR005679 Ribosomal protein S12, bacterial-type JOS54_RS07340 IPR006032 Ribosomal protein S12/S23 JOS54_RS07340 IPR012340 Nucleic acid-binding, OB-fold JOS54_RS07345 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS07345 IPR003593 AAA+ ATPase domain JOS54_RS07345 IPR003439 ABC transporter-like JOS54_RS07345 IPR017871 ABC transporter, conserved site JOS54_RS07345 IPR008995 Molybdate/tungstate binding, C-terminal JOS54_RS07345 IPR005116 Transport-associated OB, type 1 JOS54_RS07345 IPR040582 MalK, OB fold domain JOS54_RS07350 IPR017853 Glycoside hydrolase superfamily JOS54_RS07350 IPR003385 Glycoside hydrolase, family 77 JOS54_RS07355 IPR000843 LacI-type HTH domain JOS54_RS07355 IPR028082 Periplasmic binding protein-like I JOS54_RS07355 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JOS54_RS07360 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JOS54_RS07360 IPR035906 MetI-like superfamily JOS54_RS07365 IPR035906 MetI-like superfamily JOS54_RS07365 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JOS54_RS07375 IPR035090 Phosphorylase pyridoxal-phosphate attachment site JOS54_RS07375 IPR000811 Glycosyl transferase, family 35 JOS54_RS07375 IPR011833 Glycogen/starch/alpha-glucan phosphorylase JOS54_RS07390 IPR041682 AAA domain, group 14 JOS54_RS07390 IPR025420 Domain of unknown function DUF4143 JOS54_RS07390 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS07395 IPR041033 Prealbumin-like fold domain JOS54_RS07395 IPR019931 LPXTG cell wall anchor domain JOS54_RS07395 IPR008454 Collagen-binding surface protein Cna-like, B-type domain JOS54_RS07395 IPR013783 Immunoglobulin-like fold JOS54_RS07395 IPR008456 Collagen binding domain JOS54_RS07395 IPR008966 Adhesion domain superfamily JOS54_RS07395 IPR011252 Fibrogen-binding domain 1 JOS54_RS07405 IPR036397 Ribonuclease H superfamily JOS54_RS07405 IPR038965 Transposase InsF-like JOS54_RS07405 IPR009057 Homeobox-like domain superfamily JOS54_RS07405 IPR012337 Ribonuclease H-like superfamily JOS54_RS07405 IPR001584 Integrase, catalytic core JOS54_RS07435 IPR002524 Cation efflux protein JOS54_RS07435 IPR036837 Cation efflux protein, cytoplasmic domain superfamily JOS54_RS07435 IPR027470 Cation efflux protein, cytoplasmic domain JOS54_RS07435 IPR027469 Cation efflux transmembrane domain superfamily JOS54_RS07440 IPR036390 Winged helix DNA-binding domain superfamily JOS54_RS07440 IPR036388 Winged helix-like DNA-binding domain superfamily JOS54_RS07440 IPR000835 MarR-type HTH domain JOS54_RS07445 IPR006195 Aminoacyl-tRNA synthetase, class II JOS54_RS07445 IPR004618 Aspartate--ammonia ligase JOS54_RS07455 IPR005149 Transcription regulator PadR, N-terminal JOS54_RS07455 IPR036390 Winged helix DNA-binding domain superfamily JOS54_RS07455 IPR036388 Winged helix-like DNA-binding domain superfamily JOS54_RS07465 IPR012838 Pyruvate formate-lyase 1 activating enzyme JOS54_RS07465 IPR012839 Organic radical enzyme activase JOS54_RS07465 IPR001989 Radical-activating enzyme, conserved site JOS54_RS07465 IPR007197 Radical SAM JOS54_RS07465 IPR034457 Organic radical-activating enzymes JOS54_RS07465 IPR013785 Aldolase-type TIM barrel JOS54_RS07465 IPR034465 Pyruvate formate-lyase activase JOS54_RS07470 IPR019777 Formate C-acetyltransferase glycine radical, conserved site JOS54_RS07470 IPR001150 Glycine radical domain JOS54_RS07470 IPR004184 Pyruvate formate lyase domain JOS54_RS07470 IPR005949 Formate acetyltransferase JOS54_RS07475 IPR018313 Solute-binding protein family 3, conserved site JOS54_RS07475 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JOS54_RS07480 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS07480 IPR017871 ABC transporter, conserved site JOS54_RS07480 IPR003439 ABC transporter-like JOS54_RS07480 IPR003593 AAA+ ATPase domain JOS54_RS07480 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type JOS54_RS07485 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JOS54_RS07485 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain JOS54_RS07485 IPR035906 MetI-like superfamily JOS54_RS07490 IPR004104 Oxidoreductase, C-terminal JOS54_RS07490 IPR036291 NAD(P)-binding domain superfamily JOS54_RS07490 IPR000683 Oxidoreductase, N-terminal JOS54_RS07495 IPR000150 Cof family JOS54_RS07495 IPR006379 HAD-superfamily hydrolase, subfamily IIB JOS54_RS07495 IPR036412 HAD-like superfamily JOS54_RS07495 IPR023214 HAD superfamily JOS54_RS07505 IPR012651 Thiamine transporter ThiT JOS54_RS07540 IPR004772 TrkH potassium transport family JOS54_RS07540 IPR003445 Cation transporter JOS54_RS07545 IPR036291 NAD(P)-binding domain superfamily JOS54_RS07545 IPR006037 Regulator of K+ conductance, C-terminal JOS54_RS07545 IPR003148 Regulator of K+ conductance, N-terminal JOS54_RS07545 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily JOS54_RS07555 IPR006214 Bax inhibitor 1-related JOS54_RS07560 IPR018022 IPP transferase JOS54_RS07560 IPR039657 Dimethylallyltransferase JOS54_RS07560 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS07565 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JOS54_RS07565 IPR020568 Ribosomal protein S5 domain 2-type fold JOS54_RS07565 IPR037198 MutL, C-terminal domain superfamily JOS54_RS07565 IPR042121 MutL, C-terminal domain, regulatory subdomain JOS54_RS07565 IPR042120 MutL, C-terminal domain, dimerisation subdomain JOS54_RS07565 IPR014790 MutL, C-terminal, dimerisation JOS54_RS07565 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms JOS54_RS07565 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JOS54_RS07565 IPR013507 DNA mismatch repair protein, S5 domain 2-like JOS54_RS07565 IPR020667 DNA mismatch repair protein, MutL JOS54_RS07565 IPR002099 DNA mismatch repair protein family, N-terminal JOS54_RS07570 IPR023582 Impact family JOS54_RS07570 IPR035647 EF-G domain III/V-like JOS54_RS07570 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site JOS54_RS07570 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal JOS54_RS07570 IPR001498 Impact, N-terminal JOS54_RS07570 IPR036956 Impact, N-terminal domain superfamily JOS54_RS07570 IPR015796 Impact family, bacterial/archaeal JOS54_RS07570 IPR020568 Ribosomal protein S5 domain 2-type fold JOS54_RS07575 IPR008929 Chondroitin AC/alginate lyase JOS54_RS07575 IPR003159 Polysaccharide lyase family 8, central domain JOS54_RS07575 IPR012970 Polysaccharide lyase 8, N-terminal alpha-helical JOS54_RS07575 IPR011071 Polysaccharide lyase family 8-like, C-terminal JOS54_RS07575 IPR038970 Polysaccharide lyase 8 JOS54_RS07575 IPR019931 LPXTG cell wall anchor domain JOS54_RS07575 IPR014756 Immunoglobulin E-set JOS54_RS07575 IPR023295 Hyaluronate lyase, beta-sheet domain superfamily JOS54_RS07575 IPR014718 Glycoside hydrolase-type carbohydrate-binding JOS54_RS07575 IPR008979 Galactose-binding-like domain superfamily JOS54_RS07575 IPR004103 Polysaccharide lyase family 8, C-terminal JOS54_RS07575 IPR011013 Galactose mutarotase-like domain superfamily JOS54_RS07590 IPR008863 Toxic anion resistance JOS54_RS07595 IPR036514 SGNH hydrolase superfamily JOS54_RS07595 IPR002656 Acyltransferase 3 JOS54_RS07600 IPR002656 Acyltransferase 3 JOS54_RS07600 IPR036514 SGNH hydrolase superfamily JOS54_RS07605 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS07605 IPR003593 AAA+ ATPase domain JOS54_RS07605 IPR041627 CbbX, AAA lid domain JOS54_RS07605 IPR003959 ATPase, AAA-type, core JOS54_RS07605 IPR000641 CbxX/CfxQ JOS54_RS07605 IPR014232 Sporulation stage V, protein K JOS54_RS07615 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site JOS54_RS07615 IPR001525 C-5 cytosine methyltransferase JOS54_RS07615 IPR018117 DNA methylase, C-5 cytosine-specific, active site JOS54_RS07615 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JOS54_RS07650 IPR003593 AAA+ ATPase domain JOS54_RS07650 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS07650 IPR017871 ABC transporter, conserved site JOS54_RS07650 IPR003439 ABC transporter-like JOS54_RS07665 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type JOS54_RS07665 IPR014140 DNA helicase subunit AddB JOS54_RS07665 IPR014017 UvrD-like DNA helicase, C-terminal JOS54_RS07665 IPR000212 DNA helicase, UvrD/REP type JOS54_RS07665 IPR014016 UvrD-like helicase, ATP-binding domain JOS54_RS07665 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS07670 IPR014016 UvrD-like helicase, ATP-binding domain JOS54_RS07670 IPR034739 UvrD/AddA helicase, N-terminal JOS54_RS07670 IPR014152 DNA helicase subunit AddA JOS54_RS07670 IPR014017 UvrD-like DNA helicase, C-terminal JOS54_RS07670 IPR000212 DNA helicase, UvrD/REP type JOS54_RS07670 IPR011604 Exonuclease, phage-type/RecB, C-terminal JOS54_RS07670 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS07670 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type JOS54_RS07670 IPR011335 Restriction endonuclease type II-like JOS54_RS07700 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JOS54_RS07700 IPR012263 Adenine modification methylase, M.EcoRV-type JOS54_RS07700 IPR002052 DNA methylase, N-6 adenine-specific, conserved site JOS54_RS07700 IPR012327 D12 class N6 adenine-specific DNA methyltransferase JOS54_RS07700 IPR023095 Adenine-specific methyltransferase, domain 2 JOS54_RS07710 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JOS54_RS07710 IPR005467 Histidine kinase domain JOS54_RS07710 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JOS54_RS07710 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JOS54_RS07710 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JOS54_RS07710 IPR003594 Histidine kinase/HSP90-like ATPase JOS54_RS07715 IPR001789 Signal transduction response regulator, receiver domain JOS54_RS07715 IPR016032 Signal transduction response regulator, C-terminal effector JOS54_RS07715 IPR039420 Transcriptional regulatory protein WalR-like JOS54_RS07715 IPR036388 Winged helix-like DNA-binding domain superfamily JOS54_RS07715 IPR001867 OmpR/PhoB-type DNA-binding domain JOS54_RS07715 IPR011006 CheY-like superfamily JOS54_RS07720 IPR012347 Ferritin-like JOS54_RS07720 IPR009078 Ferritin-like superfamily JOS54_RS07720 IPR024934 Rubredoxin-like domain JOS54_RS07720 IPR009040 Ferritin-like diiron domain JOS54_RS07720 IPR003251 Rubrerythrin JOS54_RS07725 IPR036390 Winged helix DNA-binding domain superfamily JOS54_RS07725 IPR036388 Winged helix-like DNA-binding domain superfamily JOS54_RS07725 IPR002481 Ferric-uptake regulator JOS54_RS07730 IPR013578 Peptidase M16C associated JOS54_RS07730 IPR011765 Peptidase M16, N-terminal JOS54_RS07730 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like JOS54_RS07730 IPR007863 Peptidase M16, C-terminal JOS54_RS07740 IPR014777 Tetrapyrrole methylase, subdomain 1 JOS54_RS07740 IPR000878 Tetrapyrrole methylase JOS54_RS07740 IPR035996 Tetrapyrrole methylase superfamily JOS54_RS07740 IPR014776 Tetrapyrrole methylase, subdomain 2 JOS54_RS07740 IPR008189 rRNA small subunit methyltransferase I JOS54_RS07740 IPR018063 SAM-dependent methyltransferase RsmI, conserved site JOS54_RS07745 IPR007557 PSP1, C-terminal JOS54_RS07750 IPR004622 DNA polymerase III, delta prime subunit JOS54_RS07750 IPR015199 DNA polymerase III, delta subunit, C-terminal JOS54_RS07750 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS07755 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS07755 IPR018094 Thymidylate kinase JOS54_RS07755 IPR039430 Thymidylate kinase-like domain JOS54_RS07755 IPR018095 Thymidylate kinase, conserved site JOS54_RS07775 IPR003439 ABC transporter-like JOS54_RS07775 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS07775 IPR003593 AAA+ ATPase domain JOS54_RS07775 IPR012693 ABC transporter, phosphonate import, PhnC JOS54_RS07775 IPR017871 ABC transporter, conserved site JOS54_RS07780 IPR035906 MetI-like superfamily JOS54_RS07780 IPR005769 ABC transporter, permease PhnE/PtxC JOS54_RS07780 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JOS54_RS07785 IPR005769 ABC transporter, permease PhnE/PtxC JOS54_RS07785 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JOS54_RS07785 IPR035906 MetI-like superfamily JOS54_RS07790 IPR026893 Tyrosine/serine-protein phosphatase IphP-type JOS54_RS07790 IPR016130 Protein-tyrosine phosphatase, active site JOS54_RS07790 IPR000387 Tyrosine specific protein phosphatases domain JOS54_RS07790 IPR029021 Protein-tyrosine phosphatase-like JOS54_RS07795 IPR019931 LPXTG cell wall anchor domain JOS54_RS07795 IPR029052 Metallo-dependent phosphatase-like JOS54_RS07795 IPR041827 CpdB, N-terminal metallophosphatase domain JOS54_RS07795 IPR008334 5'-Nucleotidase, C-terminal JOS54_RS07795 IPR036907 5'-Nucleotidase, C-terminal domain superfamily JOS54_RS07795 IPR006146 5'-Nucleotidase, conserved site JOS54_RS07795 IPR006179 5'-Nucleotidase/apyrase JOS54_RS07795 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type JOS54_RS07810 IPR025490 RNA-binding protein, HP1423 type JOS54_RS07810 IPR036986 RNA-binding S4 domain superfamily JOS54_RS07810 IPR002942 RNA-binding S4 domain JOS54_RS07815 IPR036101 CarD-like/TRCF domain superfamily JOS54_RS07815 IPR005118 Transcription-repair-coupling factor, C-terminal domain JOS54_RS07815 IPR037235 TRCF-like, C-terminal domain JOS54_RS07815 IPR003711 CarD-like/TRCF domain JOS54_RS07815 IPR004576 Transcription-repair coupling factor JOS54_RS07815 IPR001650 Helicase, C-terminal JOS54_RS07815 IPR014001 Helicase superfamily 1/2, ATP-binding domain JOS54_RS07815 IPR011545 DEAD/DEAH box helicase domain JOS54_RS07815 IPR027417 P-loop containing nucleoside triphosphate hydrolase JOS54_RS07815 IPR041471 UvrB, interaction domain JOS54_RS07820 IPR036416 Peptidyl-tRNA hydrolase superfamily JOS54_RS07820 IPR018171 Peptidyl-tRNA hydrolase, conserved site JOS54_RS07820 IPR001328 Peptidyl-tRNA hydrolase JOS54_RS07835 IPR000271 Ribosomal protein L34 JOS54_RS07835 IPR020939 Ribosomal protein L34, conserved site JOS54_RS07840 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JOS54_RS07840 IPR000100 Ribonuclease P JOS54_RS07840 IPR020539 Ribonuclease P, conserved site JOS54_RS07840 IPR020568 Ribosomal protein S5 domain 2-type fold JOS54_RS07845 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 JOS54_RS07845 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes JOS54_RS07845 IPR028055 Membrane insertase YidC/Oxa1, C-terminal JOS54_RS07850 IPR034079 Jag, R3H domain JOS54_RS07850 IPR004087 K Homology domain JOS54_RS07850 IPR038008 Jag, KH domain JOS54_RS07850 IPR032782 Jag, N-terminal JOS54_RS07850 IPR001374 R3H domain JOS54_RS07850 IPR015946 K homology domain-like, alpha/beta JOS54_RS07850 IPR038247 Jag, N-terminal domain superfamily JOS54_RS07850 IPR039247 Jag protein JOS54_RS07850 IPR036867 R3H domain superfamily