locus-tag class description D5R55_RS00010 PF11638 DnaA N-terminal domain D5R55_RS00010 PF08299 Bacterial dnaA protein helix-turn-helix D5R55_RS00010 PF00308 Bacterial dnaA protein D5R55_RS00015 PF02767 DNA polymerase III beta subunit, central domain D5R55_RS00015 PF00712 DNA polymerase III beta subunit, N-terminal domain D5R55_RS00015 PF02768 DNA polymerase III beta subunit, C-terminal domain D5R55_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus D5R55_RS00020 PF00204 DNA gyrase B D5R55_RS00020 PF01751 Toprim domain D5R55_RS00020 PF18053 DNA gyrase B subunit insert domain D5R55_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS00035 PF01420 Type I restriction modification DNA specificity domain D5R55_RS00040 PF02384 N-6 DNA Methylase D5R55_RS00075 PF01292 Prokaryotic cytochrome b561 D5R55_RS00080 PF00199 Catalase D5R55_RS00085 PF08281 Sigma-70, region 4 D5R55_RS00085 PF04542 Sigma-70 region 2 D5R55_RS00115 PF04542 Sigma-70 region 2 D5R55_RS00115 PF08281 Sigma-70, region 4 D5R55_RS00120 PF02627 Carboxymuconolactone decarboxylase family D5R55_RS00125 PF12867 DinB superfamily D5R55_RS00125 PF03781 Sulfatase-modifying factor enzyme 1 D5R55_RS00130 PF10017 Histidine-specific methyltransferase, SAM-dependent D5R55_RS00150 PF08774 VRR-NUC domain D5R55_RS00150 PF04851 Type III restriction enzyme, res subunit D5R55_RS00155 PF18273 Type III R-M EcoP15I C-terminal domain D5R55_RS00155 PF01555 DNA methylase D5R55_RS00165 PF00072 Response regulator receiver domain D5R55_RS00165 PF00486 Transcriptional regulatory protein, C terminal D5R55_RS00170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS00170 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS00175 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS00180 PF00005 ABC transporter D5R55_RS00190 PF01311 Bacterial export proteins, family 1 D5R55_RS00195 PF01313 Bacterial export proteins, family 3 D5R55_RS00200 PF00813 FliP family D5R55_RS00205 PF04347 Flagellar biosynthesis protein, FliO D5R55_RS00210 PF16973 Flagellar motor switch protein FliN N-terminal D5R55_RS00210 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D5R55_RS00215 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D5R55_RS00215 PF02154 Flagellar motor switch protein FliM D5R55_RS00225 PF04172 LrgB-like family D5R55_RS00230 PF03788 LrgA family D5R55_RS00235 PF03466 LysR substrate binding domain D5R55_RS00235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS00240 PF07690 Major Facilitator Superfamily D5R55_RS00245 PF01047 MarR family D5R55_RS00255 PF02321 Outer membrane efflux protein D5R55_RS00280 PF07963 Prokaryotic N-terminal methylation motif D5R55_RS00280 PF11612 Type II secretion system (T2SS), protein J D5R55_RS00285 PF02501 Type II secretion system (T2SS), protein I D5R55_RS00285 PF07963 Prokaryotic N-terminal methylation motif D5R55_RS00290 PF07963 Prokaryotic N-terminal methylation motif D5R55_RS00290 PF12019 Type II transport protein GspH D5R55_RS00295 PF07963 Prokaryotic N-terminal methylation motif D5R55_RS00295 PF08334 Type II secretion system (T2SS), protein G D5R55_RS00305 PF00482 Type II secretion system (T2SS), protein F D5R55_RS00310 PF00437 Type II/IV secretion system protein D5R55_RS00315 PF03958 Bacterial type II/III secretion system short domain D5R55_RS00315 PF00263 Bacterial type II and III secretion system protein D5R55_RS00320 PF01464 Transglycosylase SLT domain D5R55_RS00325 PF07683 Cobalamin synthesis protein cobW C-terminal domain D5R55_RS00325 PF02492 CobW/HypB/UreG, nucleotide-binding domain D5R55_RS00330 PF00216 Bacterial DNA-binding protein D5R55_RS00335 PF05430 S-adenosyl-L-methionine-dependent methyltransferase D5R55_RS00335 PF01266 FAD dependent oxidoreductase D5R55_RS00355 PF04107 Glutamate-cysteine ligase family 2(GCS2) D5R55_RS00365 PF00117 Glutamine amidotransferase class-I D5R55_RS00365 PF02540 NAD synthase D5R55_RS00365 PF00958 GMP synthase C terminal domain D5R55_RS00370 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D5R55_RS00380 PF08521 Two-component sensor kinase N-terminal D5R55_RS00380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS00380 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS00385 PF00072 Response regulator receiver domain D5R55_RS00385 PF00486 Transcriptional regulatory protein, C terminal D5R55_RS00395 PF01329 Pterin 4 alpha carbinolamine dehydratase D5R55_RS00400 PF00351 Biopterin-dependent aromatic amino acid hydroxylase D5R55_RS00405 PF01037 Lrp/AsnC ligand binding domain D5R55_RS00415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS00415 PF03466 LysR substrate binding domain D5R55_RS00420 PF00732 GMC oxidoreductase D5R55_RS00420 PF05199 GMC oxidoreductase D5R55_RS00425 PF00005 ABC transporter D5R55_RS00425 PF12399 Branched-chain amino acid ATP-binding cassette transporter D5R55_RS00430 PF00005 ABC transporter D5R55_RS00440 PF02653 Branched-chain amino acid transport system / permease component D5R55_RS00465 PF00005 ABC transporter D5R55_RS00465 PF12399 Branched-chain amino acid ATP-binding cassette transporter D5R55_RS00470 PF00005 ABC transporter D5R55_RS00475 PF13932 GidA associated domain D5R55_RS00475 PF01134 Glucose inhibited division protein A D5R55_RS00480 PF02527 rRNA small subunit methyltransferase G D5R55_RS00485 PF13614 AAA domain D5R55_RS00490 PF02195 ParB-like nuclease domain D5R55_RS00490 PF17762 HTH domain found in ParB protein D5R55_RS00495 PF03600 Citrate transporter D5R55_RS00510 PF00119 ATP synthase A chain D5R55_RS00515 PF00137 ATP synthase subunit C D5R55_RS00520 PF00430 ATP synthase B/B' CF(0) D5R55_RS00525 PF00213 ATP synthase delta (OSCP) subunit D5R55_RS00530 PF00306 ATP synthase alpha/beta chain, C terminal domain D5R55_RS00530 PF02874 ATP synthase alpha/beta family, beta-barrel domain D5R55_RS00530 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D5R55_RS00535 PF00231 ATP synthase D5R55_RS00540 PF02874 ATP synthase alpha/beta family, beta-barrel domain D5R55_RS00540 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D5R55_RS00545 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain D5R55_RS00545 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain D5R55_RS00550 PF00501 AMP-binding enzyme D5R55_RS00550 PF13193 AMP-binding enzyme C-terminal domain D5R55_RS00560 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5R55_RS00565 PF01208 Uroporphyrinogen decarboxylase (URO-D) D5R55_RS00570 PF00270 DEAD/DEAH box helicase D5R55_RS00570 PF18319 PriA DNA helicase Cys-rich region (CRR) domain D5R55_RS00570 PF18074 Primosomal protein N C-terminal domain D5R55_RS00570 PF17764 3′ DNA-binding domain (3′BD) D5R55_RS00570 PF00271 Helicase conserved C-terminal domain D5R55_RS00575 PF00171 Aldehyde dehydrogenase family D5R55_RS00575 PF01619 Proline dehydrogenase D5R55_RS00575 PF18327 Proline utilization A proline dehydrogenase N-terminal domain D5R55_RS00575 PF14850 DNA-binding domain of Proline dehydrogenase D5R55_RS00580 PF13458 Periplasmic binding protein D5R55_RS00610 PF00355 Rieske [2Fe-2S] domain D5R55_RS00615 PF00384 Molybdopterin oxidoreductase D5R55_RS00615 PF18465 Rieske 3Fe-4S D5R55_RS00615 PF01568 Molydopterin dinucleotide binding domain D5R55_RS00620 PF01022 Bacterial regulatory protein, arsR family D5R55_RS00635 PF01451 Low molecular weight phosphotyrosine protein phosphatase D5R55_RS00640 PF01758 Sodium Bile acid symporter family D5R55_RS00650 PF03960 ArsC family D5R55_RS00655 PF03358 NADPH-dependent FMN reductase D5R55_RS00660 PF00583 Acetyltransferase (GNAT) family D5R55_RS00660 PF13607 Succinyl-CoA ligase like flavodoxin domain D5R55_RS00660 PF13380 CoA binding domain D5R55_RS00670 PF09722 Protein of unknown function (DUF2384) D5R55_RS00675 PF13193 AMP-binding enzyme C-terminal domain D5R55_RS00675 PF00501 AMP-binding enzyme D5R55_RS00680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D5R55_RS00680 PF02770 Acyl-CoA dehydrogenase, middle domain D5R55_RS00680 PF18158 Adaptive response protein AidB N-terminal domain D5R55_RS00690 PF00155 Aminotransferase class I and II D5R55_RS00695 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5R55_RS00700 PF01565 FAD binding domain D5R55_RS00700 PF02913 FAD linked oxidases, C-terminal domain D5R55_RS00710 PF13411 MerR HTH family regulatory protein D5R55_RS00715 PF00403 Heavy-metal-associated domain D5R55_RS00730 PF05552 Conserved TM helix D5R55_RS00735 PF13520 Amino acid permease D5R55_RS00740 PF06751 Ethanolamine ammonia lyase large subunit (EutB) D5R55_RS00745 PF05985 Ethanolamine ammonia-lyase light chain (EutC) D5R55_RS00750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS00750 PF03466 LysR substrate binding domain D5R55_RS00755 PF07690 Major Facilitator Superfamily D5R55_RS00765 PF00171 Aldehyde dehydrogenase family D5R55_RS00775 PF12833 Helix-turn-helix domain D5R55_RS00785 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D5R55_RS00785 PF00205 Thiamine pyrophosphate enzyme, central domain D5R55_RS00785 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D5R55_RS00795 PF01850 PIN domain D5R55_RS00800 PF03315 Serine dehydratase beta chain D5R55_RS00800 PF03313 Serine dehydratase alpha chain D5R55_RS00810 PF02347 Glycine cleavage system P-protein D5R55_RS00815 PF01597 Glycine cleavage H-protein D5R55_RS00820 PF08669 Glycine cleavage T-protein C-terminal barrel domain D5R55_RS00820 PF01571 Aminomethyltransferase folate-binding domain D5R55_RS00830 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D5R55_RS00830 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D5R55_RS00835 PF13361 UvrD-like helicase C-terminal domain D5R55_RS00835 PF00580 UvrD/REP helicase N-terminal domain D5R55_RS00840 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D5R55_RS00855 PF00132 Bacterial transferase hexapeptide (six repeats) D5R55_RS00870 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D5R55_RS00885 PF02465 Flagellar hook-associated protein 2 N-terminus D5R55_RS00885 PF07195 Flagellar hook-associated protein 2 C-terminus D5R55_RS00890 PF00669 Bacterial flagellin N-terminal helical region D5R55_RS00890 PF07196 Flagellin hook IN motif D5R55_RS00890 PF00700 Bacterial flagellin C-terminal helical region D5R55_RS00900 PF01165 Ribosomal protein S21 D5R55_RS00905 PF00958 GMP synthase C terminal domain D5R55_RS00905 PF00117 Glutamine amidotransferase class-I D5R55_RS00905 PF03352 Methyladenine glycosylase D5R55_RS00905 PF13302 Acetyltransferase (GNAT) domain D5R55_RS00905 PF13673 Acetyltransferase (GNAT) domain D5R55_RS00920 PF00230 Major intrinsic protein D5R55_RS00925 PF00816 H-NS histone family D5R55_RS00930 PF13439 Glycosyltransferase Family 4 D5R55_RS00940 PF05247 Flagellar transcriptional activator (FlhD) D5R55_RS00945 PF05280 Flagellar transcriptional activator (FlhC) D5R55_RS00950 PF01618 MotA/TolQ/ExbB proton channel family D5R55_RS00955 PF13677 Membrane MotB of proton-channel complex MotA/MotB D5R55_RS00955 PF00691 OmpA family D5R55_RS00960 PF00072 Response regulator receiver domain D5R55_RS00960 PF00486 Transcriptional regulatory protein, C terminal D5R55_RS00965 PF09078 CheY binding D5R55_RS00965 PF02895 Signal transducing histidine kinase, homodimeric domain D5R55_RS00965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS00965 PF01627 Hpt domain D5R55_RS00965 PF01584 CheW-like domain D5R55_RS00970 PF01584 CheW-like domain D5R55_RS00975 PF02203 Tar ligand binding domain homologue D5R55_RS00975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5R55_RS00975 PF00672 HAMP domain D5R55_RS00980 PF01739 CheR methyltransferase, SAM binding domain D5R55_RS00980 PF03705 CheR methyltransferase, all-alpha domain D5R55_RS00985 PF03975 CheD chemotactic sensory transduction D5R55_RS00990 PF00072 Response regulator receiver domain D5R55_RS00990 PF01339 CheB methylesterase D5R55_RS00995 PF00072 Response regulator receiver domain D5R55_RS01000 PF04344 Chemotaxis phosphatase, CheZ D5R55_RS01020 PF05656 Protein of unknown function (DUF805) D5R55_RS01025 PF01312 FlhB HrpN YscU SpaS Family D5R55_RS01030 PF00771 FHIPEP family D5R55_RS01035 PF00448 SRP54-type protein, GTPase domain D5R55_RS01035 PF00448 SRP54-type protein, GTPase domain D5R55_RS01040 PF10609 NUBPL iron-transfer P-loop NTPase D5R55_RS01045 PF04545 Sigma-70, region 4 D5R55_RS01045 PF04539 Sigma-70 region 3 D5R55_RS01045 PF04542 Sigma-70 region 2 D5R55_RS01050 PF05221 S-adenosyl-L-homocysteine hydrolase D5R55_RS01050 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain D5R55_RS01055 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV D5R55_RS01060 PF02219 Methylenetetrahydrofolate reductase D5R55_RS01065 PF01425 Amidase D5R55_RS01070 PF01738 Dienelactone hydrolase family D5R55_RS01080 PF03060 Nitronate monooxygenase D5R55_RS01085 PF13458 Periplasmic binding protein D5R55_RS01090 PF07690 Major Facilitator Superfamily D5R55_RS01105 PF16916 Dimerisation domain of Zinc Transporter D5R55_RS01105 PF01545 Cation efflux family D5R55_RS01110 PF01037 Lrp/AsnC ligand binding domain D5R55_RS01120 PF00753 Metallo-beta-lactamase superfamily D5R55_RS01130 PF03330 Lytic transglycolase D5R55_RS01130 PF05036 Sporulation related domain D5R55_RS01135 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D5R55_RS01140 PF02021 Uncharacterised protein family UPF0102 D5R55_RS01145 PF13580 SIS domain D5R55_RS01150 PF04972 BON domain D5R55_RS01155 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D5R55_RS01170 PF04717 Type VI secretion system, phage-baseplate injector D5R55_RS01225 PF13378 Enolase C-terminal domain-like D5R55_RS01225 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D5R55_RS01230 PF07690 Major Facilitator Superfamily D5R55_RS01235 PF03466 LysR substrate binding domain D5R55_RS01235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS01250 PF03055 Retinal pigment epithelial membrane protein D5R55_RS01255 PF12704 MacB-like periplasmic core domain D5R55_RS01255 PF02687 FtsX-like permease family D5R55_RS01265 PF00005 ABC transporter D5R55_RS01265 PF12704 MacB-like periplasmic core domain D5R55_RS01265 PF02687 FtsX-like permease family D5R55_RS01270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D5R55_RS01285 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D5R55_RS01285 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D5R55_RS01290 PF01810 LysE type translocator D5R55_RS01295 PF07690 Major Facilitator Superfamily D5R55_RS01300 PF03466 LysR substrate binding domain D5R55_RS01300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS01320 PF01118 Semialdehyde dehydrogenase, NAD binding domain D5R55_RS01325 PF03358 NADPH-dependent FMN reductase D5R55_RS01330 PF01161 Phosphatidylethanolamine-binding protein D5R55_RS01335 PF00156 Phosphoribosyl transferase domain D5R55_RS01340 PF00390 Malic enzyme, N-terminal domain D5R55_RS01340 PF01515 Phosphate acetyl/butaryl transferase D5R55_RS01340 PF03949 Malic enzyme, NAD binding domain D5R55_RS01355 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D5R55_RS01360 PF01037 Lrp/AsnC ligand binding domain D5R55_RS01360 PF13404 AsnC-type helix-turn-helix domain D5R55_RS01370 PF00440 Bacterial regulatory proteins, tetR family D5R55_RS01380 PF00970 Oxidoreductase FAD-binding domain D5R55_RS01380 PF00111 2Fe-2S iron-sulfur cluster binding domain D5R55_RS01380 PF00175 Oxidoreductase NAD-binding domain D5R55_RS01385 PF01883 Iron-sulfur cluster assembly protein D5R55_RS01390 PF05138 Phenylacetic acid catabolic protein D5R55_RS01395 PF06243 Phenylacetic acid degradation B D5R55_RS01400 PF05138 Phenylacetic acid catabolic protein D5R55_RS01455 PF03143 Elongation factor Tu C-terminal domain D5R55_RS01455 PF03144 Elongation factor Tu domain 2 D5R55_RS01455 PF00009 Elongation factor Tu GTP binding domain D5R55_RS01465 PF00584 SecE/Sec61-gamma subunits of protein translocation complex D5R55_RS01470 PF00467 KOW motif D5R55_RS01470 PF02357 Transcription termination factor nusG D5R55_RS01475 PF03946 Ribosomal protein L11, N-terminal domain D5R55_RS01475 PF00298 Ribosomal protein L11, RNA binding domain D5R55_RS01480 PF00687 Ribosomal protein L1p/L10e family D5R55_RS01485 PF00466 Ribosomal protein L10 D5R55_RS01490 PF16320 Ribosomal protein L7/L12 dimerisation domain D5R55_RS01490 PF00542 Ribosomal protein L7/L12 C-terminal domain D5R55_RS01495 PF04565 RNA polymerase Rpb2, domain 3 D5R55_RS01495 PF10385 RNA polymerase beta subunit external 1 domain D5R55_RS01495 PF00562 RNA polymerase Rpb2, domain 6 D5R55_RS01495 PF04560 RNA polymerase Rpb2, domain 7 D5R55_RS01495 PF04561 RNA polymerase Rpb2, domain 2 D5R55_RS01495 PF04563 RNA polymerase beta subunit D5R55_RS01500 PF00623 RNA polymerase Rpb1, domain 2 D5R55_RS01500 PF05000 RNA polymerase Rpb1, domain 4 D5R55_RS01500 PF04997 RNA polymerase Rpb1, domain 1 D5R55_RS01500 PF04983 RNA polymerase Rpb1, domain 3 D5R55_RS01500 PF04998 RNA polymerase Rpb1, domain 5 D5R55_RS01505 PF00270 DEAD/DEAH box helicase D5R55_RS01505 PF00271 Helicase conserved C-terminal domain D5R55_RS01505 PF00570 HRDC domain D5R55_RS01505 PF16124 RecQ zinc-binding D5R55_RS01505 PF09382 RQC domain D5R55_RS01515 PF00164 Ribosomal protein S12/S23 D5R55_RS01520 PF00177 Ribosomal protein S7p/S5e D5R55_RS01525 PF00009 Elongation factor Tu GTP binding domain D5R55_RS01525 PF03144 Elongation factor Tu domain 2 D5R55_RS01525 PF14492 Elongation Factor G, domain II D5R55_RS01525 PF00679 Elongation factor G C-terminus D5R55_RS01525 PF03764 Elongation factor G, domain IV D5R55_RS01530 PF03144 Elongation factor Tu domain 2 D5R55_RS01530 PF00009 Elongation factor Tu GTP binding domain D5R55_RS01530 PF03143 Elongation factor Tu C-terminal domain D5R55_RS01535 PF00338 Ribosomal protein S10p/S20e D5R55_RS01540 PF00297 Ribosomal protein L3 D5R55_RS01545 PF00573 Ribosomal protein L4/L1 family D5R55_RS01550 PF00276 Ribosomal protein L23 D5R55_RS01555 PF03947 Ribosomal Proteins L2, C-terminal domain D5R55_RS01555 PF00181 Ribosomal Proteins L2, RNA binding domain D5R55_RS01560 PF00203 Ribosomal protein S19 D5R55_RS01565 PF00237 Ribosomal protein L22p/L17e D5R55_RS01570 PF07650 KH domain D5R55_RS01570 PF00189 Ribosomal protein S3, C-terminal domain D5R55_RS01575 PF00252 Ribosomal protein L16p/L10e D5R55_RS01580 PF00831 Ribosomal L29 protein D5R55_RS01585 PF00366 Ribosomal protein S17 D5R55_RS01590 PF00238 Ribosomal protein L14p/L23e D5R55_RS01595 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 D5R55_RS01600 PF00673 ribosomal L5P family C-terminus D5R55_RS01600 PF00281 Ribosomal protein L5 D5R55_RS01605 PF00253 Ribosomal protein S14p/S29e D5R55_RS01610 PF00410 Ribosomal protein S8 D5R55_RS01615 PF00347 Ribosomal protein L6 D5R55_RS01620 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast D5R55_RS01625 PF03719 Ribosomal protein S5, C-terminal domain D5R55_RS01625 PF00333 Ribosomal protein S5, N-terminal domain D5R55_RS01630 PF00327 Ribosomal protein L30p/L7e D5R55_RS01635 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A D5R55_RS01640 PF00344 SecY translocase D5R55_RS01645 PF01176 Translation initiation factor 1A / IF-1 D5R55_RS01650 PF00444 Ribosomal protein L36 D5R55_RS01655 PF00416 Ribosomal protein S13/S18 D5R55_RS01660 PF00411 Ribosomal protein S11 D5R55_RS01665 PF01479 S4 domain D5R55_RS01665 PF00163 Ribosomal protein S4/S9 N-terminal domain D5R55_RS01670 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain D5R55_RS01670 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain D5R55_RS01670 PF01000 RNA polymerase Rpb3/RpoA insert domain D5R55_RS01675 PF01196 Ribosomal protein L17 D5R55_RS01685 PF11412 Disulphide bond corrector protein DsbC D5R55_RS01685 PF02683 Cytochrome C biogenesis protein transmembrane region D5R55_RS01690 PF00490 Delta-aminolevulinic acid dehydratase D5R55_RS01695 PF01926 50S ribosome-binding GTPase D5R55_RS01700 PF00034 Cytochrome c D5R55_RS01705 PF05140 ResB-like family D5R55_RS01710 PF01578 Cytochrome C assembly protein D5R55_RS01715 PF00174 Oxidoreductase molybdopterin binding domain D5R55_RS01720 PF01794 Ferric reductase like transmembrane component D5R55_RS01730 PF01491 Frataxin-like domain D5R55_RS01735 PF17092 Penicillin-binding protein OB-like domain D5R55_RS01735 PF00912 Transglycosylase D5R55_RS01735 PF00905 Penicillin binding protein transpeptidase domain D5R55_RS01755 PF07660 Secretin and TonB N terminus short domain D5R55_RS01755 PF03958 Bacterial type II/III secretion system short domain D5R55_RS01755 PF11741 AMIN domain D5R55_RS01755 PF00263 Bacterial type II and III secretion system protein D5R55_RS01760 PF01202 Shikimate kinase D5R55_RS01765 PF01761 3-dehydroquinate synthase D5R55_RS01770 PF01966 HD domain D5R55_RS01770 PF13286 Phosphohydrolase-associated domain D5R55_RS01775 PF13416 Bacterial extracellular solute-binding protein D5R55_RS01780 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS01785 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS01790 PF00005 ABC transporter D5R55_RS01790 PF17912 MalK OB fold domain D5R55_RS01795 PF03009 Glycerophosphoryl diester phosphodiesterase family D5R55_RS01815 PF01493 GXGXG motif D5R55_RS01815 PF00310 Glutamine amidotransferases class-II D5R55_RS01815 PF04898 Glutamate synthase central domain D5R55_RS01815 PF01645 Conserved region in glutamate synthase D5R55_RS01820 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5R55_RS01820 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D5R55_RS01825 PF02834 LigT like Phosphoesterase D5R55_RS01830 PF01266 FAD dependent oxidoreductase D5R55_RS01835 PF07690 Major Facilitator Superfamily D5R55_RS01845 PF00005 ABC transporter D5R55_RS01845 PF06472 ABC transporter transmembrane region 2 D5R55_RS01855 PF01266 FAD dependent oxidoreductase D5R55_RS01865 PF05690 Thiazole biosynthesis protein ThiG D5R55_RS01870 PF02581 Thiamine monophosphate synthase D5R55_RS01875 PF00005 ABC transporter D5R55_RS01880 PF02405 Permease MlaE D5R55_RS01885 PF02470 MlaD protein D5R55_RS01905 PF00005 ABC transporter D5R55_RS01910 PF01061 ABC-2 type transporter D5R55_RS01920 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D5R55_RS01925 PF01634 ATP phosphoribosyltransferase D5R55_RS01930 PF00815 Histidinol dehydrogenase D5R55_RS01935 PF00155 Aminotransferase class I and II D5R55_RS01940 PF00475 Imidazoleglycerol-phosphate dehydratase D5R55_RS01945 PF01914 MarC family integral membrane protein D5R55_RS01950 PF00117 Glutamine amidotransferase class-I D5R55_RS01955 PF00977 Histidine biosynthesis protein D5R55_RS01960 PF00977 Histidine biosynthesis protein D5R55_RS01965 PF01502 Phosphoribosyl-AMP cyclohydrolase D5R55_RS01970 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase D5R55_RS01985 PF02416 mttA/Hcf106 family D5R55_RS01990 PF02416 mttA/Hcf106 family D5R55_RS01995 PF00902 Sec-independent protein translocase protein (TatC) D5R55_RS02000 PF17820 PDZ domain D5R55_RS02000 PF13180 PDZ domain D5R55_RS02005 PF01784 NIF3 (NGG1p interacting factor 3) D5R55_RS02010 PF00355 Rieske [2Fe-2S] domain D5R55_RS02010 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal D5R55_RS02015 PF00032 Cytochrome b(C-terminal)/b6/petD D5R55_RS02015 PF00033 Cytochrome b/b6/petB D5R55_RS02020 PF02167 Cytochrome C1 family D5R55_RS02025 PF00043 Glutathione S-transferase, C-terminal domain D5R55_RS02025 PF02798 Glutathione S-transferase, N-terminal domain D5R55_RS02030 PF04386 Stringent starvation protein B D5R55_RS02070 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5R55_RS02080 PF06715 Gp5 C-terminal repeat (3 copies) D5R55_RS02080 PF04717 Type VI secretion system, phage-baseplate injector D5R55_RS02085 PF03527 RHS protein D5R55_RS02085 PF05593 RHS Repeat D5R55_RS02120 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE D5R55_RS02135 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 D5R55_RS02140 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath D5R55_RS02155 PF05947 Type VI secretion system, TssF D5R55_RS02165 PF17871 AAA lid domain D5R55_RS02165 PF07724 AAA domain (Cdc48 subfamily) D5R55_RS02165 PF10431 C-terminal, D2-small domain, of ClpB protein D5R55_RS02165 PF00004 ATPase family associated with various cellular activities (AAA) D5R55_RS02175 PF04717 Type VI secretion system, phage-baseplate injector D5R55_RS02175 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) D5R55_RS02175 PF13296 Putative type VI secretion system Rhs element Vgr D5R55_RS02220 PF00691 OmpA family D5R55_RS02230 PF06761 Intracellular multiplication and human macrophage-killing D5R55_RS02230 PF14331 ImcF-related N-terminal domain D5R55_RS02230 PF06744 Type VI secretion protein IcmF C-terminal D5R55_RS02260 PF03466 LysR substrate binding domain D5R55_RS02260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS02265 PF01433 Peptidase family M1 domain D5R55_RS02265 PF11838 ERAP1-like C-terminal domain D5R55_RS02280 PF07411 Domain of unknown function (DUF1508) D5R55_RS02285 PF05175 Methyltransferase small domain D5R55_RS02300 PF00440 Bacterial regulatory proteins, tetR family D5R55_RS02315 PF00012 Hsp70 protein D5R55_RS02320 PF00313 'Cold-shock' DNA-binding domain D5R55_RS02330 PF13520 Amino acid permease D5R55_RS02335 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase D5R55_RS02340 PF02441 Flavoprotein D5R55_RS02345 PF00462 Glutaredoxin D5R55_RS02350 PF17827 PrmC N-terminal domain D5R55_RS02350 PF05175 Methyltransferase small domain D5R55_RS02355 PF03462 PCRF domain D5R55_RS02355 PF00472 RF-1 domain D5R55_RS02360 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain D5R55_RS02360 PF01488 Shikimate / quinate 5-dehydrogenase D5R55_RS02360 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain D5R55_RS02365 PF00072 Response regulator receiver domain D5R55_RS02365 PF00486 Transcriptional regulatory protein, C terminal D5R55_RS02375 PF01321 Creatinase/Prolidase N-terminal domain D5R55_RS02375 PF00557 Metallopeptidase family M24 D5R55_RS02380 PF00857 Isochorismatase family D5R55_RS02390 PF00005 ABC transporter D5R55_RS02390 PF12848 ABC transporter D5R55_RS02400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS02400 PF03466 LysR substrate binding domain D5R55_RS02415 PF00324 Amino acid permease D5R55_RS02445 PF01926 50S ribosome-binding GTPase D5R55_RS02445 PF06071 Protein of unknown function (DUF933) D5R55_RS02450 PF01494 FAD binding domain D5R55_RS02455 PF13098 Thioredoxin-like domain D5R55_RS02455 PF10411 Disulfide bond isomerase protein N-terminus D5R55_RS02465 PF02525 Flavodoxin-like fold D5R55_RS02470 PF03167 Uracil DNA glycosylase superfamily D5R55_RS02480 PF00218 Indole-3-glycerol phosphate synthase D5R55_RS02485 PF02885 Glycosyl transferase family, helical bundle domain D5R55_RS02485 PF00591 Glycosyl transferase family, a/b domain D5R55_RS02490 PF00117 Glutamine amidotransferase class-I D5R55_RS02495 PF04715 Anthranilate synthase component I, N terminal region D5R55_RS02495 PF00425 chorismate binding enzyme D5R55_RS02500 PF13419 Haloacid dehalogenase-like hydrolase D5R55_RS02505 PF00834 Ribulose-phosphate 3 epimerase family D5R55_RS02510 PF04379 ApaG domain D5R55_RS02515 PF06725 3D domain D5R55_RS02515 PF03562 MltA specific insert domain D5R55_RS02520 PF00501 AMP-binding enzyme D5R55_RS02520 PF14535 AMP-binding enzyme C-terminal domain D5R55_RS02525 PF03061 Thioesterase superfamily D5R55_RS02530 PF00378 Enoyl-CoA hydratase/isomerase D5R55_RS02535 PF02803 Thiolase, C-terminal domain D5R55_RS02535 PF00108 Thiolase, N-terminal domain D5R55_RS02545 PF00378 Enoyl-CoA hydratase/isomerase D5R55_RS02580 PF01568 Molydopterin dinucleotide binding domain D5R55_RS02580 PF00384 Molybdopterin oxidoreductase D5R55_RS02580 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D5R55_RS02585 PF00501 AMP-binding enzyme D5R55_RS02585 PF13193 AMP-binding enzyme C-terminal domain D5R55_RS02590 PF13609 Gram-negative porin D5R55_RS02595 PF03232 Ubiquinone biosynthesis protein COQ7 D5R55_RS02600 PF02381 MraZ protein, putative antitoxin-like D5R55_RS02605 PF01795 MraW methylase family D5R55_RS02610 PF04999 Cell division protein FtsL D5R55_RS02615 PF03717 Penicillin-binding Protein dimerisation domain D5R55_RS02615 PF00905 Penicillin binding protein transpeptidase domain D5R55_RS02620 PF08245 Mur ligase middle domain D5R55_RS02620 PF02875 Mur ligase family, glutamate ligase domain D5R55_RS02625 PF08245 Mur ligase middle domain D5R55_RS02625 PF02875 Mur ligase family, glutamate ligase domain D5R55_RS02625 PF01225 Mur ligase family, catalytic domain D5R55_RS02630 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 D5R55_RS02630 PF00953 Glycosyl transferase family 4 D5R55_RS02635 PF08245 Mur ligase middle domain D5R55_RS02635 PF02875 Mur ligase family, glutamate ligase domain D5R55_RS02640 PF01098 Cell cycle protein D5R55_RS02645 PF04101 Glycosyltransferase family 28 C-terminal domain D5R55_RS02645 PF03033 Glycosyltransferase family 28 N-terminal domain D5R55_RS02650 PF02875 Mur ligase family, glutamate ligase domain D5R55_RS02650 PF08245 Mur ligase middle domain D5R55_RS02650 PF01225 Mur ligase family, catalytic domain D5R55_RS02655 PF01820 D-ala D-ala ligase N-terminus D5R55_RS02655 PF07478 D-ala D-ala ligase C-terminus D5R55_RS02660 PF03799 Cell division protein FtsQ D5R55_RS02660 PF08478 POTRA domain, FtsQ-type D5R55_RS02665 PF02491 SHS2 domain inserted in FTSA D5R55_RS02670 PF00091 Tubulin/FtsZ family, GTPase domain D5R55_RS02670 PF12327 FtsZ family, C-terminal domain D5R55_RS02675 PF08534 Redoxin D5R55_RS02680 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase D5R55_RS02690 PF07516 SecA Wing and Scaffold domain D5R55_RS02690 PF01043 SecA preprotein cross-linking domain D5R55_RS02690 PF07517 SecA DEAD-like domain D5R55_RS02690 PF02810 SEC-C motif D5R55_RS02700 PF01960 ArgJ family D5R55_RS02710 PF00293 NUDIX domain D5R55_RS02715 PF03884 DNA gyrase inhibitor YacG D5R55_RS02720 PF07072 Cell division protein D5R55_RS02725 PF01121 Dephospho-CoA kinase D5R55_RS02730 PF01478 Type IV leader peptidase family D5R55_RS02730 PF06750 Bacterial Peptidase A24 N-terminal domain D5R55_RS02735 PF00482 Type II secretion system (T2SS), protein F D5R55_RS02740 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain D5R55_RS02740 PF00437 Type II/IV secretion system protein D5R55_RS02745 PF01595 Cyclin M transmembrane N-terminal domain D5R55_RS02745 PF03471 Transporter associated domain D5R55_RS02745 PF00571 CBS domain D5R55_RS02755 PF00145 C-5 cytosine-specific DNA methylase D5R55_RS02775 PF03852 DNA mismatch endonuclease Vsr D5R55_RS02875 PF00348 Polyprenyl synthetase D5R55_RS02880 PF00829 Ribosomal prokaryotic L21 protein D5R55_RS02885 PF01016 Ribosomal L27 protein D5R55_RS02890 PF01926 50S ribosome-binding GTPase D5R55_RS02890 PF01018 GTP1/OBG D5R55_RS02895 PF00696 Amino acid kinase family D5R55_RS02895 PF01472 PUA domain D5R55_RS02905 PF00293 NUDIX domain D5R55_RS02915 PF04073 Aminoacyl-tRNA editing domain D5R55_RS02915 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D5R55_RS02915 PF03129 Anticodon binding domain D5R55_RS02920 PF01914 MarC family integral membrane protein D5R55_RS02925 PF00156 Phosphoribosyl transferase domain D5R55_RS02930 PF00448 SRP54-type protein, GTPase domain D5R55_RS02930 PF02881 SRP54-type protein, helical bundle domain D5R55_RS02930 PF02978 Signal peptide binding domain D5R55_RS02945 PF01510 N-acetylmuramoyl-L-alanine amidase D5R55_RS02955 PF03477 ATP cone domain D5R55_RS02955 PF02867 Ribonucleotide reductase, barrel domain D5R55_RS02955 PF00317 Ribonucleotide reductase, all-alpha domain D5R55_RS02965 PF00268 Ribonucleotide reductase, small chain D5R55_RS02985 PF00294 pfkB family carbohydrate kinase D5R55_RS02990 PF08534 Redoxin D5R55_RS03005 PF02785 Biotin carboxylase C-terminal domain D5R55_RS03005 PF00289 Biotin carboxylase, N-terminal domain D5R55_RS03005 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D5R55_RS03015 PF00364 Biotin-requiring enzyme D5R55_RS03020 PF01220 Dehydroquinase class II D5R55_RS03025 PF00578 AhpC/TSA family D5R55_RS03035 PF08245 Mur ligase middle domain D5R55_RS03035 PF01225 Mur ligase family, catalytic domain D5R55_RS03035 PF02875 Mur ligase family, glutamate ligase domain D5R55_RS03040 PF05728 Uncharacterised protein family (UPF0227) D5R55_RS03045 PF00773 RNB domain D5R55_RS03050 PF01488 Shikimate / quinate 5-dehydrogenase D5R55_RS03050 PF18317 Shikimate 5'-dehydrogenase C-terminal domain D5R55_RS03050 PF08501 Shikimate dehydrogenase substrate binding domain D5R55_RS03055 PF00912 Transglycosylase D5R55_RS03075 PF09339 IclR helix-turn-helix domain D5R55_RS03075 PF01614 Bacterial transcriptional regulator D5R55_RS03080 PF05035 2-keto-3-deoxy-galactonokinase D5R55_RS03085 PF01081 KDPG and KHG aldolase D5R55_RS03095 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D5R55_RS03100 PF00005 ABC transporter D5R55_RS03105 PF02653 Branched-chain amino acid transport system / permease component D5R55_RS03120 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D5R55_RS03130 PF02464 Competence-damaged protein D5R55_RS03135 PF04608 Phosphatidylglycerophosphatase A D5R55_RS03140 PF02769 AIR synthase related protein, C-terminal domain D5R55_RS03140 PF00586 AIR synthase related protein, N-terminal domain D5R55_RS03150 PF03949 Malic enzyme, NAD binding domain D5R55_RS03150 PF00390 Malic enzyme, N-terminal domain D5R55_RS03150 PF01515 Phosphate acetyl/butaryl transferase D5R55_RS03155 PF00545 ribonuclease D5R55_RS03170 PF04452 RNA methyltransferase D5R55_RS03175 PF18029 Glyoxalase-like domain D5R55_RS03180 PF17284 Spermidine synthase tetramerisation domain D5R55_RS03185 PF02780 Transketolase, C-terminal domain D5R55_RS03185 PF02779 Transketolase, pyrimidine binding domain D5R55_RS03185 PF00456 Transketolase, thiamine diphosphate binding domain D5R55_RS03190 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D5R55_RS03190 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D5R55_RS03200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS03200 PF03466 LysR substrate binding domain D5R55_RS03210 PF08240 Alcohol dehydrogenase GroES-like domain D5R55_RS03210 PF00107 Zinc-binding dehydrogenase D5R55_RS03215 PF00392 Bacterial regulatory proteins, gntR family D5R55_RS03215 PF07729 FCD domain D5R55_RS03220 PF00375 Sodium:dicarboxylate symporter family D5R55_RS03225 PF03561 Allantoicase repeat D5R55_RS03230 PF04115 Ureidoglycolate lyase D5R55_RS03235 PF01475 Ferric uptake regulator family D5R55_RS03240 PF04355 SmpA / OmlA family D5R55_RS03245 PF01113 Dihydrodipicolinate reductase, N-terminus D5R55_RS03245 PF05173 Dihydrodipicolinate reductase, C-terminus D5R55_RS03250 PF01618 MotA/TolQ/ExbB proton channel family D5R55_RS03255 PF02472 Biopolymer transport protein ExbD/TolR D5R55_RS03260 PF08264 Anticodon-binding domain of tRNA D5R55_RS03260 PF00133 tRNA synthetases class I (I, L, M and V) D5R55_RS03260 PF13603 Leucyl-tRNA synthetase, Domain 2 D5R55_RS03260 PF09334 tRNA synthetases class I (M) D5R55_RS03265 PF04390 Lipopolysaccharide-assembly D5R55_RS03270 PF06144 DNA polymerase III, delta subunit D5R55_RS03270 PF14840 Processivity clamp loader gamma complex DNA pol III C-term D5R55_RS03280 PF00171 Aldehyde dehydrogenase family D5R55_RS03285 PF03653 Uncharacterised protein family (UPF0093) D5R55_RS03290 PF01418 Helix-turn-helix domain, rpiR family D5R55_RS03290 PF02685 Glucokinase D5R55_RS03290 PF01380 SIS domain D5R55_RS03295 PF00920 Dehydratase family D5R55_RS03300 PF01081 KDPG and KHG aldolase D5R55_RS03310 PF02447 GntP family permease D5R55_RS03325 PF02910 Fumarate reductase flavoprotein C-term D5R55_RS03325 PF00890 FAD binding domain D5R55_RS03330 PF08328 Adenylosuccinate lyase C-terminal D5R55_RS03330 PF00206 Lyase D5R55_RS03335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS03335 PF03466 LysR substrate binding domain D5R55_RS03340 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain D5R55_RS03340 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D5R55_RS03345 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5R55_RS03350 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS03355 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS03360 PF00005 ABC transporter D5R55_RS03365 PF16168 Adhesin of bacterial autotransporter system, probable stalk D5R55_RS03365 PF03797 Autotransporter beta-domain D5R55_RS03365 PF13018 Extended Signal Peptide of Type V secretion system D5R55_RS03370 PF13230 Glutamine amidotransferases class-II D5R55_RS03375 PF01979 Amidohydrolase family D5R55_RS03400 PF00572 Ribosomal protein L13 D5R55_RS03405 PF00380 Ribosomal protein S9/S16 D5R55_RS03410 PF01521 Iron-sulphur cluster biosynthesis D5R55_RS03415 PF03702 Anhydro-N-acetylmuramic acid kinase D5R55_RS03420 PF01479 S4 domain D5R55_RS03420 PF00579 tRNA synthetases class I (W and Y) D5R55_RS03425 PF02580 D-Tyr-tRNA(Tyr) deacylase D5R55_RS03430 PF00300 Histidine phosphatase superfamily (branch 1) D5R55_RS03445 PF17864 RuvB AAA lid domain D5R55_RS03445 PF05491 RuvB C-terminal winged helix domain D5R55_RS03445 PF05496 Holliday junction DNA helicase RuvB P-loop domain D5R55_RS03450 PF07499 RuvA, C-terminal domain D5R55_RS03450 PF01330 RuvA N terminal domain D5R55_RS03455 PF02075 Crossover junction endodeoxyribonuclease RuvC D5R55_RS03460 PF02142 MGS-like domain D5R55_RS03460 PF01808 AICARFT/IMPCHase bienzyme D5R55_RS03465 PF02954 Bacterial regulatory protein, Fis family D5R55_RS03470 PF01207 Dihydrouridine synthase (Dus) D5R55_RS03475 PF01494 FAD binding domain D5R55_RS03480 PF00557 Metallopeptidase family M24 D5R55_RS03480 PF05195 Aminopeptidase P, N-terminal domain D5R55_RS03490 PF13417 Glutathione S-transferase, N-terminal domain D5R55_RS03490 PF00043 Glutathione S-transferase, C-terminal domain D5R55_RS03495 PF01645 Conserved region in glutamate synthase D5R55_RS03505 PF00293 NUDIX domain D5R55_RS03510 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D5R55_RS03510 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D5R55_RS03515 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch D5R55_RS03520 PF02233 NAD(P) transhydrogenase beta subunit D5R55_RS03525 PF03466 LysR substrate binding domain D5R55_RS03525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS03530 PF00795 Carbon-nitrogen hydrolase D5R55_RS03550 PF02926 THUMP domain D5R55_RS03550 PF01170 Putative RNA methylase family UPF0020 D5R55_RS03570 PF02470 MlaD protein D5R55_RS03575 PF04403 Paraquat-inducible protein A D5R55_RS03590 PF04264 YceI-like domain D5R55_RS03595 PF04264 YceI-like domain D5R55_RS03600 PF07690 Major Facilitator Superfamily D5R55_RS03605 PF13180 PDZ domain D5R55_RS03605 PF03572 Peptidase family S41 D5R55_RS03610 PF07549 SecD/SecF GG Motif D5R55_RS03610 PF02355 Protein export membrane protein D5R55_RS03615 PF13721 SecD export protein N-terminal TM region D5R55_RS03615 PF02355 Protein export membrane protein D5R55_RS03615 PF07549 SecD/SecF GG Motif D5R55_RS03620 PF02699 Preprotein translocase subunit D5R55_RS03625 PF01702 Queuine tRNA-ribosyltransferase D5R55_RS03630 PF02547 Queuosine biosynthesis protein D5R55_RS03635 PF00271 Helicase conserved C-terminal domain D5R55_RS03635 PF00270 DEAD/DEAH box helicase D5R55_RS03635 PF17191 RecG wedge domain D5R55_RS03640 PF03466 LysR substrate binding domain D5R55_RS03640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS03645 PF00141 Peroxidase D5R55_RS03650 PF00210 Ferritin-like domain D5R55_RS03655 PF01040 UbiA prenyltransferase family D5R55_RS03660 PF14748 Pyrroline-5-carboxylate reductase dimerisation D5R55_RS03660 PF03807 NADP oxidoreductase coenzyme F420-dependent D5R55_RS03665 PF01168 Alanine racemase, N-terminal domain D5R55_RS03670 PF02754 Cysteine-rich domain D5R55_RS03670 PF13183 4Fe-4S dicluster domain D5R55_RS03675 PF01565 FAD binding domain D5R55_RS03680 PF02913 FAD linked oxidases, C-terminal domain D5R55_RS03680 PF01565 FAD binding domain D5R55_RS03685 PF01565 FAD binding domain D5R55_RS03685 PF02913 FAD linked oxidases, C-terminal domain D5R55_RS03690 PF01923 Cobalamin adenosyltransferase D5R55_RS03695 PF00970 Oxidoreductase FAD-binding domain D5R55_RS03695 PF00175 Oxidoreductase NAD-binding domain D5R55_RS03695 PF00042 Globin D5R55_RS03710 PF00793 DAHP synthetase I family D5R55_RS03715 PF01523 Putative modulator of DNA gyrase D5R55_RS03720 PF00795 Carbon-nitrogen hydrolase D5R55_RS03730 PF03710 Glutamate-ammonia ligase adenylyltransferase D5R55_RS03730 PF08335 GlnD PII-uridylyltransferase D5R55_RS03740 PF02463 RecF/RecN/SMC N terminal domain D5R55_RS03745 PF01513 ATP-NAD kinase D5R55_RS03750 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding D5R55_RS03750 PF01628 HrcA protein C terminal domain D5R55_RS03755 PF00762 Ferrochelatase D5R55_RS03760 PF01479 S4 domain D5R55_RS03770 PF01025 GrpE D5R55_RS03780 PF00012 Hsp70 protein D5R55_RS03785 PF00226 DnaJ domain D5R55_RS03785 PF00684 DnaJ central domain D5R55_RS03785 PF01556 DnaJ C terminal domain D5R55_RS03790 PF04715 Anthranilate synthase component I, N terminal region D5R55_RS03790 PF00425 chorismate binding enzyme D5R55_RS03790 PF00117 Glutamine amidotransferase class-I D5R55_RS03805 PF02548 Ketopantoate hydroxymethyltransferase D5R55_RS03815 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D5R55_RS03820 PF01743 Poly A polymerase head domain D5R55_RS03820 PF12626 Polymerase A arginine-rich C-terminus D5R55_RS03820 PF12627 Probable RNA and SrmB- binding site of polymerase A D5R55_RS03830 PF00308 Bacterial dnaA protein D5R55_RS03835 PF02769 AIR synthase related protein, C-terminal domain D5R55_RS03835 PF00586 AIR synthase related protein, N-terminal domain D5R55_RS03845 PF07690 Major Facilitator Superfamily D5R55_RS03850 PF02909 Tetracyclin repressor-like, C-terminal domain D5R55_RS03850 PF00440 Bacterial regulatory proteins, tetR family D5R55_RS03860 PF08676 MutL C terminal dimerisation domain D5R55_RS03860 PF01119 DNA mismatch repair protein, C-terminal domain D5R55_RS03865 PF09335 SNARE associated Golgi protein D5R55_RS03870 PF00924 Mechanosensitive ion channel D5R55_RS03870 PF05552 Conserved TM helix D5R55_RS03885 PF02627 Carboxymuconolactone decarboxylase family D5R55_RS03895 PF05360 yiaA/B two helix domain D5R55_RS03940 PF00691 OmpA family D5R55_RS03945 PF04052 TolB amino-terminal domain D5R55_RS03945 PF07676 WD40-like Beta Propeller Repeat D5R55_RS03955 PF02472 Biopolymer transport protein ExbD/TolR D5R55_RS03960 PF01618 MotA/TolQ/ExbB proton channel family D5R55_RS03965 PF03061 Thioesterase superfamily D5R55_RS03970 PF00106 short chain dehydrogenase D5R55_RS03980 PF00464 Serine hydroxymethyltransferase D5R55_RS03985 PF03477 ATP cone domain D5R55_RS04010 PF07963 Prokaryotic N-terminal methylation motif D5R55_RS04010 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor D5R55_RS04030 PF00578 AhpC/TSA family D5R55_RS04030 PF10417 C-terminal domain of 1-Cys peroxiredoxin D5R55_RS04035 PF02770 Acyl-CoA dehydrogenase, middle domain D5R55_RS04035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D5R55_RS04035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D5R55_RS04060 PF01494 FAD binding domain D5R55_RS04070 PF07690 Major Facilitator Superfamily D5R55_RS04075 PF04209 homogentisate 1,2-dioxygenase D5R55_RS04090 PF07690 Major Facilitator Superfamily D5R55_RS04095 PF00881 Nitroreductase family D5R55_RS04100 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D5R55_RS04100 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D5R55_RS04105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS04105 PF03466 LysR substrate binding domain D5R55_RS04110 PF00266 Aminotransferase class-V D5R55_RS04115 PF01965 DJ-1/PfpI family D5R55_RS04115 PF12833 Helix-turn-helix domain D5R55_RS04120 PF00892 EamA-like transporter family D5R55_RS04135 PF07690 Major Facilitator Superfamily D5R55_RS04140 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain D5R55_RS04140 PF01799 [2Fe-2S] binding domain D5R55_RS04140 PF00111 2Fe-2S iron-sulfur cluster binding domain D5R55_RS04140 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D5R55_RS04145 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D5R55_RS04145 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain D5R55_RS04160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS04165 PF01323 DSBA-like thioredoxin domain D5R55_RS04175 PF04972 BON domain D5R55_RS04180 PF10605 3HB-oligomer hydrolase (3HBOH) D5R55_RS04205 PF01925 Sulfite exporter TauE/SafE D5R55_RS04210 PF07690 Major Facilitator Superfamily D5R55_RS04215 PF01323 DSBA-like thioredoxin domain D5R55_RS04220 PF08348 YheO-like PAS domain D5R55_RS04220 PF13309 HTH domain D5R55_RS04225 PF02423 Ornithine cyclodeaminase/mu-crystallin family D5R55_RS04230 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5R55_RS04235 PF01266 FAD dependent oxidoreductase D5R55_RS04255 PF08281 Sigma-70, region 4 D5R55_RS04255 PF04542 Sigma-70 region 2 D5R55_RS04280 PF00005 ABC transporter D5R55_RS04280 PF08402 TOBE domain D5R55_RS04285 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS04295 PF04261 Dyp-type peroxidase family D5R55_RS04295 PF10518 TAT (twin-arginine translocation) pathway signal sequence D5R55_RS04310 PF00166 Chaperonin 10 Kd subunit D5R55_RS04315 PF00118 TCP-1/cpn60 chaperonin family D5R55_RS04325 PF00301 Rubredoxin D5R55_RS04335 PF02622 Uncharacterized ACR, COG1678 D5R55_RS04340 PF03652 Holliday junction resolvase D5R55_RS04345 PF00156 Phosphoribosyl transferase domain D5R55_RS04350 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D5R55_RS04350 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D5R55_RS04355 PF01979 Amidohydrolase family D5R55_RS04365 PF00149 Calcineurin-like phosphoesterase D5R55_RS04370 PF16363 GDP-mannose 4,6 dehydratase D5R55_RS04375 PF00483 Nucleotidyl transferase D5R55_RS04380 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase D5R55_RS04385 PF04321 RmlD substrate binding domain D5R55_RS04395 PF01050 Mannose-6-phosphate isomerase D5R55_RS04395 PF00483 Nucleotidyl transferase D5R55_RS04405 PF14524 Wzt C-terminal domain D5R55_RS04405 PF00005 ABC transporter D5R55_RS04410 PF08241 Methyltransferase domain D5R55_RS04420 PF16363 GDP-mannose 4,6 dehydratase D5R55_RS04425 PF16363 GDP-mannose 4,6 dehydratase D5R55_RS04455 PF01040 UbiA prenyltransferase family D5R55_RS04460 PF01370 NAD dependent epimerase/dehydratase family D5R55_RS04465 PF00953 Glycosyl transferase family 4 D5R55_RS04470 PF02719 Polysaccharide biosynthesis protein D5R55_RS04475 PF09286 Pro-kumamolisin, activation domain D5R55_RS04475 PF00082 Subtilase family D5R55_RS04485 PF16363 GDP-mannose 4,6 dehydratase D5R55_RS04490 PF00534 Glycosyl transferases group 1 D5R55_RS04490 PF13439 Glycosyltransferase Family 4 D5R55_RS04510 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D5R55_RS04510 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D5R55_RS04510 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D5R55_RS04510 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D5R55_RS04515 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D5R55_RS04525 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) D5R55_RS04525 PF00534 Glycosyl transferases group 1 D5R55_RS04530 PF02492 CobW/HypB/UreG, nucleotide-binding domain D5R55_RS04535 PF01730 UreF D5R55_RS04540 PF02814 UreE urease accessory protein, N-terminal domain D5R55_RS04540 PF05194 UreE urease accessory protein, C-terminal domain D5R55_RS04545 PF01979 Amidohydrolase family D5R55_RS04545 PF00449 Urease alpha-subunit, N-terminal domain D5R55_RS04550 PF00699 Urease beta subunit D5R55_RS04555 PF00547 Urease, gamma subunit D5R55_RS04560 PF01774 UreD urease accessory protein D5R55_RS04575 PF00005 ABC transporter D5R55_RS04580 PF00005 ABC transporter D5R55_RS04590 PF02653 Branched-chain amino acid transport system / permease component D5R55_RS04605 PF00581 Rhodanese-like domain D5R55_RS04625 PF06969 HemN C-terminal domain D5R55_RS04625 PF04055 Radical SAM superfamily D5R55_RS04630 PF03692 Putative zinc- or iron-chelating domain D5R55_RS04640 PF02673 Bacitracin resistance protein BacA D5R55_RS04645 PF02390 Putative methyltransferase D5R55_RS04660 PF13378 Enolase C-terminal domain-like D5R55_RS04675 PF00455 DeoR C terminal sensor domain D5R55_RS04675 PF08220 DeoR-like helix-turn-helix domain D5R55_RS04680 PF00293 NUDIX domain D5R55_RS04690 PF02146 Sir2 family D5R55_RS04695 PF09286 Pro-kumamolisin, activation domain D5R55_RS04695 PF00082 Subtilase family D5R55_RS04700 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D5R55_RS04710 PF02325 YGGT family D5R55_RS04735 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase D5R55_RS04745 PF00155 Aminotransferase class I and II D5R55_RS04750 PF01029 NusB family D5R55_RS04755 PF00885 6,7-dimethyl-8-ribityllumazine synthase D5R55_RS04760 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D5R55_RS04760 PF00925 GTP cyclohydrolase II D5R55_RS04770 PF00677 Lumazine binding domain D5R55_RS04775 PF01872 RibD C-terminal domain D5R55_RS04775 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D5R55_RS04780 PF00202 Aminotransferase class-III D5R55_RS04795 PF07690 Major Facilitator Superfamily D5R55_RS04815 PF02685 Glucokinase D5R55_RS04815 PF01380 SIS domain D5R55_RS04815 PF01418 Helix-turn-helix domain, rpiR family D5R55_RS04820 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D5R55_RS04825 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain D5R55_RS04825 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain D5R55_RS04830 PF01547 Bacterial extracellular solute-binding protein D5R55_RS04835 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS04840 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS04845 PF08402 TOBE domain D5R55_RS04845 PF00005 ABC transporter D5R55_RS04850 PF03458 UPF0126 domain D5R55_RS04855 PF01713 Smr domain D5R55_RS04855 PF00488 MutS domain V D5R55_RS04860 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5R55_RS04865 PF13491 4TM region of DNA translocase FtsK/SpoIIIE D5R55_RS04865 PF09397 Ftsk gamma domain D5R55_RS04865 PF01580 FtsK/SpoIIIE family D5R55_RS04865 PF17854 FtsK alpha domain D5R55_RS04870 PF03548 Outer membrane lipoprotein carrier protein LolA D5R55_RS04875 PF00004 ATPase family associated with various cellular activities (AAA) D5R55_RS04875 PF16193 AAA C-terminal domain D5R55_RS04875 PF12002 MgsA AAA+ ATPase C terminal D5R55_RS04885 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D5R55_RS04885 PF02403 Seryl-tRNA synthetase N-terminal domain D5R55_RS04895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5R55_RS04895 PF00672 HAMP domain D5R55_RS04900 PF00487 Fatty acid desaturase D5R55_RS04915 PF03775 Septum formation inhibitor MinC, C-terminal domain D5R55_RS04915 PF05209 Septum formation inhibitor MinC, N-terminal domain D5R55_RS04920 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D5R55_RS04925 PF03776 Septum formation topological specificity factor MinE D5R55_RS04935 PF00654 Voltage gated chloride channel D5R55_RS04940 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D5R55_RS04950 PF07690 Major Facilitator Superfamily D5R55_RS04950 PF00083 Sugar (and other) transporter D5R55_RS04980 PF06969 HemN C-terminal domain D5R55_RS04980 PF04055 Radical SAM superfamily D5R55_RS04985 PF01725 Ham1 family D5R55_RS04990 PF01138 3' exoribonuclease family, domain 1 D5R55_RS04990 PF03725 3' exoribonuclease family, domain 2 D5R55_RS04995 PF03755 YicC-like family, N-terminal region D5R55_RS04995 PF08340 Domain of unknown function (DUF1732) D5R55_RS05000 PF00625 Guanylate kinase D5R55_RS05005 PF01192 RNA polymerase Rpb6 D5R55_RS05010 PF04607 Region found in RelA / SpoT proteins D5R55_RS05010 PF02824 TGS domain D5R55_RS05010 PF13291 ACT domain D5R55_RS05030 PF03449 Transcription elongation factor, N-terminal D5R55_RS05030 PF01272 Transcription elongation factor, GreA/GreB, C-term D5R55_RS05035 PF13609 Gram-negative porin D5R55_RS05045 PF00313 'Cold-shock' DNA-binding domain D5R55_RS05050 PF00929 Exonuclease D5R55_RS05050 PF01541 GIY-YIG catalytic domain D5R55_RS05065 PF00593 TonB dependent receptor D5R55_RS05065 PF07715 TonB-dependent Receptor Plug Domain D5R55_RS05095 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain D5R55_RS05100 PF17432 Domain of unknown function (DUF3458_C) ARM repeats D5R55_RS05100 PF11940 Domain of unknown function (DUF3458) Ig-like fold D5R55_RS05100 PF01433 Peptidase family M1 domain D5R55_RS05110 PF01169 Uncharacterized protein family UPF0016 D5R55_RS05120 PF01979 Amidohydrolase family D5R55_RS05130 PF00962 Adenosine/AMP deaminase D5R55_RS05140 PF02600 Disulfide bond formation protein DsbB D5R55_RS05145 PF01425 Amidase D5R55_RS05150 PF00392 Bacterial regulatory proteins, gntR family D5R55_RS05150 PF07729 FCD domain D5R55_RS05160 PF07722 Peptidase C26 D5R55_RS05175 PF07690 Major Facilitator Superfamily D5R55_RS05185 PF01494 FAD binding domain D5R55_RS05195 PF01568 Molydopterin dinucleotide binding domain D5R55_RS05195 PF12838 4Fe-4S dicluster domain D5R55_RS05195 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D5R55_RS05195 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region D5R55_RS05195 PF00384 Molybdopterin oxidoreductase D5R55_RS05200 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region D5R55_RS05200 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D5R55_RS05200 PF00037 4Fe-4S binding domain D5R55_RS05210 PF12728 Helix-turn-helix domain D5R55_RS05210 PF12727 PBP superfamily domain D5R55_RS05230 PF13419 Haloacid dehalogenase-like hydrolase D5R55_RS05240 PF00691 OmpA family D5R55_RS05245 PF00521 DNA gyrase/topoisomerase IV, subunit A D5R55_RS05245 PF03989 DNA gyrase C-terminal domain, beta-propeller D5R55_RS05255 PF00266 Aminotransferase class-V D5R55_RS05260 PF00800 Prephenate dehydratase D5R55_RS05260 PF01817 Chorismate mutase type II D5R55_RS05260 PF01842 ACT domain D5R55_RS05265 PF02153 Prephenate dehydrogenase D5R55_RS05265 PF01842 ACT domain D5R55_RS05270 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D5R55_RS05275 PF02224 Cytidylate kinase D5R55_RS05280 PF00575 S1 RNA binding domain D5R55_RS05285 PF00216 Bacterial DNA-binding protein D5R55_RS05295 PF18073 Rubredoxin metal binding domain D5R55_RS05300 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D5R55_RS05300 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D5R55_RS05300 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D5R55_RS05305 PF00294 pfkB family carbohydrate kinase D5R55_RS05310 PF01370 NAD dependent epimerase/dehydratase family D5R55_RS05320 PF00291 Pyridoxal-phosphate dependent enzyme D5R55_RS05325 PF13406 Transglycosylase SLT domain D5R55_RS05330 PF00850 Histone deacetylase domain D5R55_RS05335 PF12146 Serine aminopeptidase, S33 D5R55_RS05340 PF09383 NIL domain D5R55_RS05340 PF00005 ABC transporter D5R55_RS05345 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS05350 PF03180 NLPA lipoprotein D5R55_RS05355 PF01012 Electron transfer flavoprotein domain D5R55_RS05360 PF00766 Electron transfer flavoprotein FAD-binding domain D5R55_RS05360 PF01012 Electron transfer flavoprotein domain D5R55_RS05380 PF01266 FAD dependent oxidoreductase D5R55_RS05385 PF01037 Lrp/AsnC ligand binding domain D5R55_RS05400 PF07995 Glucose / Sorbosone dehydrogenase D5R55_RS05405 PF00886 Ribosomal protein S16 D5R55_RS05410 PF01782 RimM N-terminal domain D5R55_RS05410 PF05239 PRC-barrel domain D5R55_RS05415 PF01746 tRNA (Guanine-1)-methyltransferase D5R55_RS05420 PF01245 Ribosomal protein L19 D5R55_RS05430 PF03186 CobD/Cbib protein D5R55_RS05430 PF17113 Regulatory signalling modulator protein AmpE D5R55_RS05440 PF03193 RsgA GTPase D5R55_RS05445 PF01435 Peptidase family M48 D5R55_RS05450 PF00929 Exonuclease D5R55_RS05455 PF00994 Probable molybdopterin binding domain D5R55_RS05460 PF04751 Protein of unknown function (DUF615) D5R55_RS05465 PF01523 Putative modulator of DNA gyrase D5R55_RS05470 PF00186 Dihydrofolate reductase D5R55_RS05480 PF00072 Response regulator receiver domain D5R55_RS05480 PF00158 Sigma-54 interaction domain D5R55_RS05480 PF02954 Bacterial regulatory protein, Fis family D5R55_RS05485 PF00303 Thymidylate synthase D5R55_RS05500 PF03061 Thioesterase superfamily D5R55_RS05505 PF10415 Fumarase C C-terminus D5R55_RS05505 PF00206 Lyase D5R55_RS05510 PF01554 MatE D5R55_RS05535 PF03591 AzlC protein D5R55_RS05545 PF05981 CreA protein D5R55_RS05560 PF11953 Domain of unknown function (DUF3470) D5R55_RS05560 PF00037 4Fe-4S binding domain D5R55_RS05570 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family D5R55_RS05570 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain D5R55_RS05585 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D5R55_RS05585 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D5R55_RS05590 PF02646 RmuC family D5R55_RS05605 PF03453 MoeA N-terminal region (domain I and II) D5R55_RS05605 PF03454 MoeA C-terminal region (domain IV) D5R55_RS05605 PF00994 Probable molybdopterin binding domain D5R55_RS05610 PF12804 MobA-like NTP transferase domain D5R55_RS05615 PF04055 Radical SAM superfamily D5R55_RS05615 PF06463 Molybdenum Cofactor Synthesis C D5R55_RS05620 PF10150 Ribonuclease E/G family D5R55_RS05620 PF00575 S1 RNA binding domain D5R55_RS05620 PF12111 Polyribonucleotide phosphorylase C terminal D5R55_RS05630 PF00849 RNA pseudouridylate synthase D5R55_RS05630 PF01479 S4 domain D5R55_RS05635 PF13419 Haloacid dehalogenase-like hydrolase D5R55_RS05645 PF01343 Peptidase family S49 D5R55_RS05650 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D5R55_RS05655 PF02545 Maf-like protein D5R55_RS05660 PF02620 Large ribosomal RNA subunit accumulation protein YceD D5R55_RS05665 PF01783 Ribosomal L32p protein family D5R55_RS05670 PF02504 Fatty acid synthesis protein D5R55_RS05675 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D5R55_RS05675 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D5R55_RS05680 PF00698 Acyl transferase domain D5R55_RS05690 PF00550 Phosphopantetheine attachment site D5R55_RS05695 PF00109 Beta-ketoacyl synthase, N-terminal domain D5R55_RS05695 PF02801 Beta-ketoacyl synthase, C-terminal domain D5R55_RS05705 PF08281 Sigma-70, region 4 D5R55_RS05705 PF04542 Sigma-70 region 2 D5R55_RS05715 PF03888 MucB/RseB N-terminal domain D5R55_RS05715 PF17188 MucB/RseB C-terminal domain D5R55_RS05720 PF13180 PDZ domain D5R55_RS05730 PF06421 GTP-binding protein LepA C-terminus D5R55_RS05730 PF00679 Elongation factor G C-terminus D5R55_RS05730 PF00009 Elongation factor Tu GTP binding domain D5R55_RS05730 PF03144 Elongation factor Tu domain 2 D5R55_RS05735 PF10502 Signal peptidase, peptidase S26 D5R55_RS05740 PF14622 Ribonuclease-III-like D5R55_RS05740 PF00035 Double-stranded RNA binding motif D5R55_RS05745 PF07650 KH domain D5R55_RS05745 PF01926 50S ribosome-binding GTPase D5R55_RS05750 PF02565 Recombination protein O C terminal D5R55_RS05750 PF11967 Recombination protein O N terminal D5R55_RS05755 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ D5R55_RS05760 PF01648 4'-phosphopantetheinyl transferase superfamily D5R55_RS05765 PF00933 Glycosyl hydrolase family 3 N terminal domain D5R55_RS05770 PF00072 Response regulator receiver domain D5R55_RS05770 PF00158 Sigma-54 interaction domain D5R55_RS05770 PF02954 Bacterial regulatory protein, Fis family D5R55_RS05775 PF09285 Elongation factor P, C-terminal D5R55_RS05775 PF08207 Elongation factor P (EF-P) KOW-like domain D5R55_RS05775 PF01132 Elongation factor P (EF-P) OB domain D5R55_RS05785 PF01541 GIY-YIG catalytic domain D5R55_RS05785 PF08459 UvrC Helix-hairpin-helix N-terminal D5R55_RS05785 PF02151 UvrB/uvrC motif D5R55_RS05790 PF01066 CDP-alcohol phosphatidyltransferase D5R55_RS05830 PF00557 Metallopeptidase family M24 D5R55_RS05835 PF13185 GAF domain D5R55_RS05840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS05840 PF03466 LysR substrate binding domain D5R55_RS05845 PF02678 Pirin D5R55_RS05845 PF05726 Pirin C-terminal cupin domain D5R55_RS05850 PF13673 Acetyltransferase (GNAT) domain D5R55_RS05865 PF02630 SCO1/SenC D5R55_RS05875 PF02358 Trehalose-phosphatase D5R55_RS05880 PF00982 Glycosyltransferase family 20 D5R55_RS05885 PF00664 ABC transporter transmembrane region D5R55_RS05885 PF00005 ABC transporter D5R55_RS05895 PF00534 Glycosyl transferases group 1 D5R55_RS05895 PF13439 Glycosyltransferase Family 4 D5R55_RS05910 PF13378 Enolase C-terminal domain-like D5R55_RS05910 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D5R55_RS05925 PF13458 Periplasmic binding protein D5R55_RS05930 PF05506 Domain of unknown function (DUF756) D5R55_RS05930 PF04185 Phosphoesterase family D5R55_RS05935 PF08543 Phosphomethylpyrimidine kinase D5R55_RS05940 PF00561 alpha/beta hydrolase fold D5R55_RS05945 PF00296 Luciferase-like monooxygenase D5R55_RS05955 PF00919 Uncharacterized protein family UPF0004 D5R55_RS05955 PF18693 TRAM domain D5R55_RS05955 PF04055 Radical SAM superfamily D5R55_RS05960 PF04794 YdjC-like protein D5R55_RS05985 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS05990 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS05995 PF00005 ABC transporter D5R55_RS06000 PF12833 Helix-turn-helix domain D5R55_RS06015 PF00202 Aminotransferase class-III D5R55_RS06020 PF04958 Arginine N-succinyltransferase beta subunit D5R55_RS06025 PF04958 Arginine N-succinyltransferase beta subunit D5R55_RS06030 PF00171 Aldehyde dehydrogenase family D5R55_RS06035 PF04996 Succinylarginine dihydrolase D5R55_RS06040 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family D5R55_RS06050 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5R55_RS06060 PF03707 Bacterial signalling protein N terminal repeat D5R55_RS06060 PF00990 Diguanylate cyclase, GGDEF domain D5R55_RS06060 PF00563 EAL domain D5R55_RS06065 PF10417 C-terminal domain of 1-Cys peroxiredoxin D5R55_RS06065 PF00578 AhpC/TSA family D5R55_RS06085 PF00873 AcrB/AcrD/AcrF family D5R55_RS06090 PF00873 AcrB/AcrD/AcrF family D5R55_RS06095 PF13533 Biotin-lipoyl like D5R55_RS06110 PF00394 Multicopper oxidase D5R55_RS06110 PF07732 Multicopper oxidase D5R55_RS06145 PF00034 Cytochrome c D5R55_RS06150 PF01578 Cytochrome C assembly protein D5R55_RS06160 PF01464 Transglycosylase SLT domain D5R55_RS06160 PF14718 Soluble lytic murein transglycosylase L domain D5R55_RS06165 PF00196 Bacterial regulatory proteins, luxR family D5R55_RS06165 PF00072 Response regulator receiver domain D5R55_RS06170 PF05231 MASE1 D5R55_RS06170 PF07730 Histidine kinase D5R55_RS06170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS06180 PF00072 Response regulator receiver domain D5R55_RS06180 PF00196 Bacterial regulatory proteins, luxR family D5R55_RS06185 PF08334 Type II secretion system (T2SS), protein G D5R55_RS06185 PF07963 Prokaryotic N-terminal methylation motif D5R55_RS06190 PF00482 Type II secretion system (T2SS), protein F D5R55_RS06195 PF00437 Type II/IV secretion system protein D5R55_RS06220 PF00263 Bacterial type II and III secretion system protein D5R55_RS06220 PF03958 Bacterial type II/III secretion system short domain D5R55_RS06230 PF08334 Type II secretion system (T2SS), protein G D5R55_RS06230 PF07963 Prokaryotic N-terminal methylation motif D5R55_RS06245 PF00909 Ammonium Transporter Family D5R55_RS06260 PF02082 Transcriptional regulator D5R55_RS06270 PF13404 AsnC-type helix-turn-helix domain D5R55_RS06270 PF01037 Lrp/AsnC ligand binding domain D5R55_RS06275 PF08402 TOBE domain D5R55_RS06275 PF00005 ABC transporter D5R55_RS06280 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS06285 PF13416 Bacterial extracellular solute-binding protein D5R55_RS06295 PF00324 Amino acid permease D5R55_RS06300 PF12323 Helix-turn-helix domain D5R55_RS06300 PF01385 Probable transposase D5R55_RS06300 PF07282 Putative transposase DNA-binding domain D5R55_RS06305 PF12805 FUSC-like inner membrane protein yccS D5R55_RS06310 PF17946 RecC C-terminal domain D5R55_RS06315 PF13361 UvrD-like helicase C-terminal domain D5R55_RS06315 PF12705 PD-(D/E)XK nuclease superfamily D5R55_RS06315 PF00580 UvrD/REP helicase N-terminal domain D5R55_RS06320 PF13538 UvrD-like helicase C-terminal domain D5R55_RS06325 PF00472 RF-1 domain D5R55_RS06330 PF12792 CSS motif domain associated with EAL D5R55_RS06330 PF00563 EAL domain D5R55_RS06350 PF05433 Glycine zipper 2TM domain D5R55_RS06355 PF01964 Radical SAM ThiC family D5R55_RS06355 PF13667 ThiC-associated domain D5R55_RS06365 PF01292 Prokaryotic cytochrome b561 D5R55_RS06370 PF00174 Oxidoreductase molybdopterin binding domain D5R55_RS06390 PF00892 EamA-like transporter family D5R55_RS06395 PF07690 Major Facilitator Superfamily D5R55_RS06400 PF00149 Calcineurin-like phosphoesterase D5R55_RS06405 PF00005 ABC transporter D5R55_RS06405 PF08402 TOBE domain D5R55_RS06410 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS06425 PF00356 Bacterial regulatory proteins, lacI family D5R55_RS06435 PF01613 Flavin reductase like domain D5R55_RS06440 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal D5R55_RS06440 PF00676 Dehydrogenase E1 component D5R55_RS06445 PF02779 Transketolase, pyrimidine binding domain D5R55_RS06445 PF02780 Transketolase, C-terminal domain D5R55_RS06450 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D5R55_RS06450 PF00364 Biotin-requiring enzyme D5R55_RS06450 PF02817 e3 binding domain D5R55_RS06455 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5R55_RS06455 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D5R55_RS06460 PF13460 NAD(P)H-binding D5R55_RS06465 PF00109 Beta-ketoacyl synthase, N-terminal domain D5R55_RS06465 PF02801 Beta-ketoacyl synthase, C-terminal domain D5R55_RS06470 PF01638 HxlR-like helix-turn-helix D5R55_RS06480 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin D5R55_RS06485 PF00267 Gram-negative porin D5R55_RS06490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS06490 PF03466 LysR substrate binding domain D5R55_RS06495 PF07690 Major Facilitator Superfamily D5R55_RS06495 PF00083 Sugar (and other) transporter D5R55_RS06500 PF01546 Peptidase family M20/M25/M40 D5R55_RS06500 PF07687 Peptidase dimerisation domain D5R55_RS06505 PF00850 Histone deacetylase domain D5R55_RS06510 PF07690 Major Facilitator Superfamily D5R55_RS06515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS06515 PF03466 LysR substrate binding domain D5R55_RS06530 PF03466 LysR substrate binding domain D5R55_RS06530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS06535 PF03471 Transporter associated domain D5R55_RS06535 PF03741 Integral membrane protein TerC family D5R55_RS06545 PF00011 Hsp20/alpha crystallin family D5R55_RS06555 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D5R55_RS06555 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D5R55_RS06565 PF03466 LysR substrate binding domain D5R55_RS06565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS06580 PF16957 Malonate decarboxylase, alpha subunit, transporter D5R55_RS06585 PF06857 Malonate decarboxylase delta subunit (MdcD) D5R55_RS06590 PF01039 Carboxyl transferase domain D5R55_RS06600 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG D5R55_RS06605 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase D5R55_RS06620 PF00156 Phosphoribosyl transferase domain D5R55_RS06620 PF05139 Erythromycin esterase D5R55_RS06640 PF08946 Osmosensory transporter coiled coil D5R55_RS06640 PF00083 Sugar (and other) transporter D5R55_RS06650 PF02694 Uncharacterised BCR, YnfA/UPF0060 family D5R55_RS06655 PF00929 Exonuclease D5R55_RS06660 PF00075 RNase H D5R55_RS06665 PF08241 Methyltransferase domain D5R55_RS06670 PF16123 Hydroxyacylglutathione hydrolase C-terminus D5R55_RS06670 PF00753 Metallo-beta-lactamase superfamily D5R55_RS06675 PF01476 LysM domain D5R55_RS06675 PF01464 Transglycosylase SLT domain D5R55_RS06680 PF07690 Major Facilitator Superfamily D5R55_RS06690 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain D5R55_RS06690 PF00117 Glutamine amidotransferase class-I D5R55_RS06695 PF01810 LysE type translocator D5R55_RS06700 PF02142 MGS-like domain D5R55_RS06700 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D5R55_RS06700 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain D5R55_RS06705 PF01272 Transcription elongation factor, GreA/GreB, C-term D5R55_RS06705 PF03449 Transcription elongation factor, N-terminal D5R55_RS06715 PF01985 CRS1 / YhbY (CRM) domain D5R55_RS06720 PF01728 FtsJ-like methyltransferase D5R55_RS06725 PF01434 Peptidase family M41 D5R55_RS06725 PF06480 FtsH Extracellular D5R55_RS06725 PF00004 ATPase family associated with various cellular activities (AAA) D5R55_RS06725 PF17862 AAA+ lid domain D5R55_RS06730 PF00809 Pterin binding enzyme D5R55_RS06735 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D5R55_RS06735 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D5R55_RS06735 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D5R55_RS06735 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D5R55_RS06745 PF12849 PBP superfamily domain D5R55_RS06750 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS06755 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS06760 PF00005 ABC transporter D5R55_RS06765 PF01895 PhoU domain D5R55_RS06770 PF00072 Response regulator receiver domain D5R55_RS06770 PF00486 Transcriptional regulatory protein, C terminal D5R55_RS06775 PF00989 PAS fold D5R55_RS06775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS06775 PF11808 Phosphate regulon sensor protein PhoR D5R55_RS06775 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS06780 PF13089 Polyphosphate kinase N-terminal domain D5R55_RS06780 PF13090 Polyphosphate kinase C-terminal domain 2 D5R55_RS06780 PF02503 Polyphosphate kinase middle domain D5R55_RS06780 PF17941 Polyphosphate kinase C-terminal domain 1 D5R55_RS06785 PF02541 Ppx/GppA phosphatase family D5R55_RS06820 PF01554 MatE D5R55_RS06835 PF01476 LysM domain D5R55_RS06835 PF01551 Peptidase family M23 D5R55_RS06845 PF02673 Bacitracin resistance protein BacA D5R55_RS06880 PF05947 Type VI secretion system, TssF D5R55_RS06885 PF04717 Type VI secretion system, phage-baseplate injector D5R55_RS06885 PF06715 Gp5 C-terminal repeat (3 copies) D5R55_RS06920 PF00440 Bacterial regulatory proteins, tetR family D5R55_RS06930 PF00561 alpha/beta hydrolase fold D5R55_RS06935 PF00733 Asparagine synthase D5R55_RS06935 PF13537 Glutamine amidotransferase domain D5R55_RS06945 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS06945 PF00672 HAMP domain D5R55_RS06945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS06945 PF01627 Hpt domain D5R55_RS06945 PF00072 Response regulator receiver domain D5R55_RS06945 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D5R55_RS06950 PF03707 Bacterial signalling protein N terminal repeat D5R55_RS06950 PF13188 PAS domain D5R55_RS06950 PF00990 Diguanylate cyclase, GGDEF domain D5R55_RS06950 PF00563 EAL domain D5R55_RS06970 PF00263 Bacterial type II and III secretion system protein D5R55_RS06970 PF13629 Pilus formation protein N terminal region D5R55_RS06970 PF04972 BON domain D5R55_RS06985 PF00437 Type II/IV secretion system protein D5R55_RS07020 PF00535 Glycosyl transferase family 2 D5R55_RS07025 PF01380 SIS domain D5R55_RS07065 PF02350 UDP-N-acetylglucosamine 2-epimerase D5R55_RS07070 PF01799 [2Fe-2S] binding domain D5R55_RS07070 PF00111 2Fe-2S iron-sulfur cluster binding domain D5R55_RS07075 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D5R55_RS07080 PF02770 Acyl-CoA dehydrogenase, middle domain D5R55_RS07080 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D5R55_RS07080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D5R55_RS07080 PF12806 Acetyl-CoA dehydrogenase C-terminal like D5R55_RS07085 PF14765 Polyketide synthase dehydratase D5R55_RS07085 PF00109 Beta-ketoacyl synthase, N-terminal domain D5R55_RS07085 PF16197 Ketoacyl-synthetase C-terminal extension D5R55_RS07085 PF00698 Acyl transferase domain D5R55_RS07085 PF08240 Alcohol dehydrogenase GroES-like domain D5R55_RS07085 PF00107 Zinc-binding dehydrogenase D5R55_RS07085 PF02801 Beta-ketoacyl synthase, C-terminal domain D5R55_RS07085 PF00550 Phosphopantetheine attachment site D5R55_RS07085 PF08659 KR domain D5R55_RS07090 PF10400 Virulence activator alpha C-term D5R55_RS07090 PF03551 Transcriptional regulator PadR-like family D5R55_RS07095 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5R55_RS07095 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D5R55_RS07105 PF07715 TonB-dependent Receptor Plug Domain D5R55_RS07105 PF00593 TonB dependent receptor D5R55_RS07110 PF00005 ABC transporter D5R55_RS07120 PF01032 FecCD transport family D5R55_RS07125 PF00672 HAMP domain D5R55_RS07125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS07125 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS07130 PF00072 Response regulator receiver domain D5R55_RS07130 PF00486 Transcriptional regulatory protein, C terminal D5R55_RS07150 PF01464 Transglycosylase SLT domain D5R55_RS07155 PF13609 Gram-negative porin D5R55_RS07165 PF04542 Sigma-70 region 2 D5R55_RS07165 PF08281 Sigma-70, region 4 D5R55_RS07170 PF16220 Domain of unknown function (DUF4880) D5R55_RS07170 PF04773 FecR protein D5R55_RS07175 PF07715 TonB-dependent Receptor Plug Domain D5R55_RS07185 PF03466 LysR substrate binding domain D5R55_RS07185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS07195 PF01613 Flavin reductase like domain D5R55_RS07200 PF03466 LysR substrate binding domain D5R55_RS07200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS07205 PF03600 Citrate transporter D5R55_RS07220 PF00795 Carbon-nitrogen hydrolase D5R55_RS07250 PF01066 CDP-alcohol phosphatidyltransferase D5R55_RS07255 PF12146 Serine aminopeptidase, S33 D5R55_RS07255 PF12147 Putative methyltransferase D5R55_RS07260 PF00782 Dual specificity phosphatase, catalytic domain D5R55_RS07270 PF00563 EAL domain D5R55_RS07270 PF00990 Diguanylate cyclase, GGDEF domain D5R55_RS07270 PF03707 Bacterial signalling protein N terminal repeat D5R55_RS07275 PF03170 Bacterial cellulose synthase subunit D5R55_RS07280 PF01270 Glycosyl hydrolases family 8 D5R55_RS07285 PF13181 Tetratricopeptide repeat D5R55_RS07285 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) D5R55_RS07300 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D5R55_RS07305 PF03552 Cellulose synthase D5R55_RS07305 PF00535 Glycosyl transferase family 2 D5R55_RS07305 PF07238 PilZ domain D5R55_RS07310 PF11658 Cellulose biosynthesis protein BcsG D5R55_RS07320 PF05726 Pirin C-terminal cupin domain D5R55_RS07320 PF02678 Pirin D5R55_RS07330 PF00999 Sodium/hydrogen exchanger family D5R55_RS07345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS07345 PF03466 LysR substrate binding domain D5R55_RS07355 PF07969 Amidohydrolase family D5R55_RS07380 PF04185 Phosphoesterase family D5R55_RS07385 PF03150 Di-haem cytochrome c peroxidase D5R55_RS07385 PF00034 Cytochrome c D5R55_RS07395 PF00293 NUDIX domain D5R55_RS07400 PF00749 tRNA synthetases class I (E and Q), catalytic domain D5R55_RS07400 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain D5R55_RS07425 PF02515 CoA-transferase family III D5R55_RS07430 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D5R55_RS07430 PF01411 tRNA synthetases class II (A) D5R55_RS07430 PF02272 DHHA1 domain D5R55_RS07435 PF03466 LysR substrate binding domain D5R55_RS07435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS07440 PF06779 Uncharacterised MFS-type transporter YbfB D5R55_RS07445 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB D5R55_RS07445 PF08479 POTRA domain, ShlB-type D5R55_RS07450 PF05860 haemagglutination activity domain D5R55_RS07455 PF00293 NUDIX domain D5R55_RS07455 PF09297 NADH pyrophosphatase zinc ribbon domain D5R55_RS07460 PF03061 Thioesterase superfamily D5R55_RS07475 PF00005 ABC transporter D5R55_RS07480 PF00005 ABC transporter D5R55_RS07490 PF02801 Beta-ketoacyl synthase, C-terminal domain D5R55_RS07490 PF00109 Beta-ketoacyl synthase, N-terminal domain D5R55_RS07495 PF03061 Thioesterase superfamily D5R55_RS07500 PF07690 Major Facilitator Superfamily D5R55_RS07505 PF00857 Isochorismatase family D5R55_RS07515 PF02515 CoA-transferase family III D5R55_RS07520 PF03328 HpcH/HpaI aldolase/citrate lyase family D5R55_RS07525 PF03972 MmgE/PrpD family D5R55_RS07535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS07535 PF03466 LysR substrate binding domain D5R55_RS07550 PF03328 HpcH/HpaI aldolase/citrate lyase family D5R55_RS07560 PF02515 CoA-transferase family III D5R55_RS07570 PF07690 Major Facilitator Superfamily D5R55_RS07575 PF03928 Haem-degrading D5R55_RS07580 PF04962 KduI/IolB family D5R55_RS07585 PF01261 Xylose isomerase-like TIM barrel D5R55_RS07590 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D5R55_RS07590 PF00205 Thiamine pyrophosphate enzyme, central domain D5R55_RS07590 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D5R55_RS07595 PF00294 pfkB family carbohydrate kinase D5R55_RS07600 PF13407 Periplasmic binding protein domain D5R55_RS07605 PF00005 ABC transporter D5R55_RS07610 PF02653 Branched-chain amino acid transport system / permease component D5R55_RS07615 PF01261 Xylose isomerase-like TIM barrel D5R55_RS07620 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D5R55_RS07620 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D5R55_RS07630 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D5R55_RS07630 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D5R55_RS07635 PF01418 Helix-turn-helix domain, rpiR family D5R55_RS07635 PF01380 SIS domain D5R55_RS07640 PF00171 Aldehyde dehydrogenase family D5R55_RS07645 PF03466 LysR substrate binding domain D5R55_RS07645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS07650 PF01206 Sulfurtransferase TusA D5R55_RS07665 PF00072 Response regulator receiver domain D5R55_RS07665 PF00486 Transcriptional regulatory protein, C terminal D5R55_RS07675 PF14827 Double sensory domain of two-component sensor kinase D5R55_RS07675 PF00672 HAMP domain D5R55_RS07675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS07675 PF13426 PAS domain D5R55_RS07675 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS07685 PF00483 Nucleotidyl transferase D5R55_RS07690 PF08264 Anticodon-binding domain of tRNA D5R55_RS07690 PF10458 Valyl tRNA synthetase tRNA binding arm D5R55_RS07690 PF00133 tRNA synthetases class I (I, L, M and V) D5R55_RS07700 PF13361 UvrD-like helicase C-terminal domain D5R55_RS07700 PF00580 UvrD/REP helicase N-terminal domain D5R55_RS07705 PF01048 Phosphorylase superfamily D5R55_RS07710 PF07690 Major Facilitator Superfamily D5R55_RS07715 PF02203 Tar ligand binding domain homologue D5R55_RS07715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5R55_RS07715 PF00672 HAMP domain D5R55_RS07720 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D5R55_RS07730 PF04632 Fusaric acid resistance protein family D5R55_RS07735 PF02321 Outer membrane efflux protein D5R55_RS07745 PF03466 LysR substrate binding domain D5R55_RS07745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS07755 PF01565 FAD binding domain D5R55_RS07755 PF02913 FAD linked oxidases, C-terminal domain D5R55_RS07765 PF03358 NADPH-dependent FMN reductase D5R55_RS07770 PF03631 Virulence factor BrkB D5R55_RS07785 PF07690 Major Facilitator Superfamily D5R55_RS07790 PF01264 Chorismate synthase D5R55_RS07815 PF01144 Coenzyme A transferase D5R55_RS07820 PF01144 Coenzyme A transferase D5R55_RS07840 PF03466 LysR substrate binding domain D5R55_RS07840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS07845 PF12697 Alpha/beta hydrolase family D5R55_RS07850 PF01042 Endoribonuclease L-PSP D5R55_RS07855 PF13291 ACT domain D5R55_RS07855 PF04607 Region found in RelA / SpoT proteins D5R55_RS07855 PF02824 TGS domain D5R55_RS07870 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D5R55_RS07870 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D5R55_RS07870 PF03129 Anticodon binding domain D5R55_RS07870 PF02824 TGS domain D5R55_RS07875 PF05198 Translation initiation factor IF-3, N-terminal domain D5R55_RS07875 PF00707 Translation initiation factor IF-3, C-terminal domain D5R55_RS07880 PF01632 Ribosomal protein L35 D5R55_RS07885 PF00453 Ribosomal protein L20 D5R55_RS07890 PF01409 tRNA synthetases class II core domain (F) D5R55_RS07890 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain D5R55_RS07895 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain D5R55_RS07895 PF01588 Putative tRNA binding domain D5R55_RS07895 PF03147 Ferredoxin-fold anticodon binding domain D5R55_RS07895 PF03484 tRNA synthetase B5 domain D5R55_RS07895 PF03483 B3/4 domain D5R55_RS07900 PF00216 Bacterial DNA-binding protein D5R55_RS07930 PF06804 NlpB/DapX lipoprotein D5R55_RS07970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS07970 PF03466 LysR substrate binding domain D5R55_RS07975 PF00155 Aminotransferase class I and II D5R55_RS07980 PF04079 Segregation and condensation complex subunit ScpB D5R55_RS07985 PF00849 RNA pseudouridylate synthase D5R55_RS07985 PF01479 S4 domain D5R55_RS07990 PF02576 RimP N-terminal domain D5R55_RS07990 PF17384 RimP C-terminal SH3 domain D5R55_RS07995 PF13184 NusA-like KH domain D5R55_RS07995 PF08529 NusA N-terminal domain D5R55_RS08000 PF08364 Bacterial translation initiation factor IF-2 associated region D5R55_RS08000 PF11987 Translation-initiation factor 2 D5R55_RS08000 PF00009 Elongation factor Tu GTP binding domain D5R55_RS08000 PF04760 Translation initiation factor IF-2, N-terminal region D5R55_RS08005 PF02033 Ribosome-binding factor A D5R55_RS08010 PF01509 TruB family pseudouridylate synthase (N terminal domain) D5R55_RS08010 PF16198 tRNA pseudouridylate synthase B C-terminal domain D5R55_RS08010 PF09157 Pseudouridine synthase II TruB, C-terminal D5R55_RS08015 PF07690 Major Facilitator Superfamily D5R55_RS08020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D5R55_RS08020 PF00529 HlyD membrane-fusion protein of T1SS D5R55_RS08025 PF02321 Outer membrane efflux protein D5R55_RS08030 PF01047 MarR family D5R55_RS08040 PF00009 Elongation factor Tu GTP binding domain D5R55_RS08040 PF00679 Elongation factor G C-terminus D5R55_RS08040 PF03144 Elongation factor Tu domain 2 D5R55_RS08050 PF02779 Transketolase, pyrimidine binding domain D5R55_RS08050 PF16870 2-oxoglutarate dehydrogenase C-terminal D5R55_RS08050 PF00676 Dehydrogenase E1 component D5R55_RS08050 PF16078 2-oxoglutarate dehydrogenase N-terminus D5R55_RS08055 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D5R55_RS08055 PF00364 Biotin-requiring enzyme D5R55_RS08055 PF02817 e3 binding domain D5R55_RS08060 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5R55_RS08060 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D5R55_RS08065 PF03969 AFG1-like ATPase D5R55_RS08120 PF04972 BON domain D5R55_RS08120 PF13629 Pilus formation protein N terminal region D5R55_RS08120 PF00263 Bacterial type II and III secretion system protein D5R55_RS08130 PF00437 Type II/IV secretion system protein D5R55_RS08160 PF06490 Flagellar regulatory protein FleQ D5R55_RS08160 PF02954 Bacterial regulatory protein, Fis family D5R55_RS08160 PF00158 Sigma-54 interaction domain D5R55_RS08170 PF17209 Hfq protein D5R55_RS08185 PF13193 AMP-binding enzyme C-terminal domain D5R55_RS08185 PF00501 AMP-binding enzyme D5R55_RS08190 PF00440 Bacterial regulatory proteins, tetR family D5R55_RS08195 PF07690 Major Facilitator Superfamily D5R55_RS08215 PF00294 pfkB family carbohydrate kinase D5R55_RS08220 PF13407 Periplasmic binding protein domain D5R55_RS08225 PF02653 Branched-chain amino acid transport system / permease component D5R55_RS08230 PF00005 ABC transporter D5R55_RS08235 PF00480 ROK family D5R55_RS08235 PF01047 MarR family D5R55_RS08245 PF09084 NMT1/THI5 like D5R55_RS08255 PF00672 HAMP domain D5R55_RS08255 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS08255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS08260 PF00704 Glycosyl hydrolases family 18 D5R55_RS08260 PF08329 Chitinase A, N-terminal domain D5R55_RS08265 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading D5R55_RS08265 PF18416 N-acetylglucosamine binding protein domain 2 D5R55_RS08270 PF08334 Type II secretion system (T2SS), protein G D5R55_RS08275 PF01464 Transglycosylase SLT domain D5R55_RS08280 PF00482 Type II secretion system (T2SS), protein F D5R55_RS08285 PF00437 Type II/IV secretion system protein D5R55_RS08310 PF03958 Bacterial type II/III secretion system short domain D5R55_RS08310 PF00263 Bacterial type II and III secretion system protein D5R55_RS08315 PF08334 Type II secretion system (T2SS), protein G D5R55_RS08315 PF07963 Prokaryotic N-terminal methylation motif D5R55_RS08320 PF07963 Prokaryotic N-terminal methylation motif D5R55_RS08330 PF00072 Response regulator receiver domain D5R55_RS08330 PF00486 Transcriptional regulatory protein, C terminal D5R55_RS08340 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D5R55_RS08340 PF02753 Pili assembly chaperone PapD, C-terminal domain D5R55_RS08345 PF13954 PapC N-terminal domain D5R55_RS08345 PF00577 Outer membrane usher protein D5R55_RS08345 PF13953 PapC C-terminal domain D5R55_RS08355 PF01292 Prokaryotic cytochrome b561 D5R55_RS08365 PF00773 RNB domain D5R55_RS08365 PF00575 S1 RNA binding domain D5R55_RS08365 PF08206 Ribonuclease B OB domain D5R55_RS08365 PF08461 Ribonuclease R winged-helix domain D5R55_RS08365 PF17876 Cold shock domain D5R55_RS08370 PF00588 SpoU rRNA Methylase family D5R55_RS08370 PF08032 RNA 2'-O ribose methyltransferase substrate binding D5R55_RS08375 PF01510 N-acetylmuramoyl-L-alanine amidase D5R55_RS08380 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) D5R55_RS08390 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D5R55_RS08390 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D5R55_RS08395 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS08400 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5R55_RS08405 PF01180 Dihydroorotate dehydrogenase D5R55_RS08410 PF04376 Arginine-tRNA-protein transferase, N terminus D5R55_RS08410 PF04377 Arginine-tRNA-protein transferase, C terminus D5R55_RS08415 PF03588 Leucyl/phenylalanyl-tRNA protein transferase D5R55_RS08420 PF00293 NUDIX domain D5R55_RS08420 PF09297 NADH pyrophosphatase zinc ribbon domain D5R55_RS08430 PF03928 Haem-degrading D5R55_RS08435 PF00893 Small Multidrug Resistance protein D5R55_RS08450 PF00296 Luciferase-like monooxygenase D5R55_RS08455 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS08460 PF00005 ABC transporter D5R55_RS08465 PF03459 TOBE domain D5R55_RS08480 PF01207 Dihydrouridine synthase (Dus) D5R55_RS08500 PF00682 HMGL-like D5R55_RS08500 PF07836 DmpG-like communication domain D5R55_RS08545 PF01638 HxlR-like helix-turn-helix D5R55_RS08550 PF01385 Probable transposase D5R55_RS08550 PF07282 Putative transposase DNA-binding domain D5R55_RS08550 PF12323 Helix-turn-helix domain D5R55_RS08560 PF00248 Aldo/keto reductase family D5R55_RS08565 PF07690 Major Facilitator Superfamily D5R55_RS08570 PF07687 Peptidase dimerisation domain D5R55_RS08570 PF01546 Peptidase family M20/M25/M40 D5R55_RS08575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS08575 PF03466 LysR substrate binding domain D5R55_RS08580 PF00581 Rhodanese-like domain D5R55_RS08585 PF03773 Predicted permease D5R55_RS08595 PF01061 ABC-2 type transporter D5R55_RS08600 PF00005 ABC transporter D5R55_RS08620 PF00717 Peptidase S24-like D5R55_RS08620 PF01726 LexA DNA binding domain D5R55_RS08635 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS08640 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS08645 PF00005 ABC transporter D5R55_RS08645 PF12857 TOBE-like domain D5R55_RS08650 PF03466 LysR substrate binding domain D5R55_RS08650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS08655 PF13407 Periplasmic binding protein domain D5R55_RS08660 PF00005 ABC transporter D5R55_RS08665 PF02653 Branched-chain amino acid transport system / permease component D5R55_RS08670 PF00356 Bacterial regulatory proteins, lacI family D5R55_RS08675 PF00294 pfkB family carbohydrate kinase D5R55_RS08680 PF00672 HAMP domain D5R55_RS08680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5R55_RS08680 PF02203 Tar ligand binding domain homologue D5R55_RS08690 PF06798 PrkA serine protein kinase C-terminal domain D5R55_RS08690 PF08298 PrkA AAA domain D5R55_RS08695 PF04285 Protein of unknown function (DUF444) D5R55_RS08700 PF04293 SpoVR like protein D5R55_RS08705 PF00083 Sugar (and other) transporter D5R55_RS08710 PF03466 LysR substrate binding domain D5R55_RS08710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS08715 PF04371 Porphyromonas-type peptidyl-arginine deiminase D5R55_RS08720 PF00795 Carbon-nitrogen hydrolase D5R55_RS08725 PF13416 Bacterial extracellular solute-binding protein D5R55_RS08730 PF04371 Porphyromonas-type peptidyl-arginine deiminase D5R55_RS08735 PF04371 Porphyromonas-type peptidyl-arginine deiminase D5R55_RS08740 PF16970 Type-1 fimbrial protein, A D5R55_RS08745 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D5R55_RS08745 PF02753 Pili assembly chaperone PapD, C-terminal domain D5R55_RS08750 PF00577 Outer membrane usher protein D5R55_RS08750 PF13953 PapC C-terminal domain D5R55_RS08750 PF13954 PapC N-terminal domain D5R55_RS08755 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D5R55_RS08755 PF02753 Pili assembly chaperone PapD, C-terminal domain D5R55_RS08760 PF05860 haemagglutination activity domain D5R55_RS08775 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5R55_RS08780 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS08785 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS08790 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain D5R55_RS08790 PF13018 Extended Signal Peptide of Type V secretion system D5R55_RS08790 PF05594 Haemagluttinin repeat D5R55_RS08790 PF13332 Hemagglutinin repeat D5R55_RS08790 PF05860 haemagglutination activity domain D5R55_RS08820 PF17287 POTRA domain D5R55_RS08820 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB D5R55_RS08820 PF08479 POTRA domain, ShlB-type D5R55_RS08825 PF01551 Peptidase family M23 D5R55_RS08825 PF08525 Opacity-associated protein A N-terminal motif D5R55_RS08825 PF01476 LysM domain D5R55_RS08830 PF08361 MAATS-type transcriptional repressor, C-terminal region D5R55_RS08830 PF00440 Bacterial regulatory proteins, tetR family D5R55_RS08835 PF00529 HlyD membrane-fusion protein of T1SS D5R55_RS08835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D5R55_RS08840 PF00873 AcrB/AcrD/AcrF family D5R55_RS08845 PF02321 Outer membrane efflux protein D5R55_RS08855 PF00419 Fimbrial protein D5R55_RS08860 PF00577 Outer membrane usher protein D5R55_RS08860 PF13954 PapC N-terminal domain D5R55_RS08860 PF13953 PapC C-terminal domain D5R55_RS08865 PF02753 Pili assembly chaperone PapD, C-terminal domain D5R55_RS08865 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D5R55_RS08880 PF03621 MbtH-like protein D5R55_RS08885 PF02668 Taurine catabolism dioxygenase TauD, TfdA family D5R55_RS08890 PF00005 ABC transporter D5R55_RS08895 PF01032 FecCD transport family D5R55_RS08905 PF01497 Periplasmic binding protein D5R55_RS08910 PF00664 ABC transporter transmembrane region D5R55_RS08910 PF00005 ABC transporter D5R55_RS08915 PF13193 AMP-binding enzyme C-terminal domain D5R55_RS08915 PF00501 AMP-binding enzyme D5R55_RS08915 PF00668 Condensation domain D5R55_RS08915 PF00550 Phosphopantetheine attachment site D5R55_RS08920 PF00668 Condensation domain D5R55_RS08920 PF00550 Phosphopantetheine attachment site D5R55_RS08920 PF13193 AMP-binding enzyme C-terminal domain D5R55_RS08920 PF00501 AMP-binding enzyme D5R55_RS08930 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) D5R55_RS08935 PF07715 TonB-dependent Receptor Plug Domain D5R55_RS08935 PF00593 TonB dependent receptor D5R55_RS08940 PF00551 Formyl transferase D5R55_RS08950 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin D5R55_RS08955 PF01850 PIN domain D5R55_RS08970 PF07687 Peptidase dimerisation domain D5R55_RS08970 PF01546 Peptidase family M20/M25/M40 D5R55_RS08975 PF07685 CobB/CobQ-like glutamine amidotransferase domain D5R55_RS08975 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D5R55_RS08980 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP D5R55_RS08980 PF12557 Cob(I)alamin adenosyltransferase N terminal D5R55_RS08990 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D5R55_RS08995 PF00593 TonB dependent receptor D5R55_RS08995 PF07715 TonB-dependent Receptor Plug Domain D5R55_RS09000 PF02492 CobW/HypB/UreG, nucleotide-binding domain D5R55_RS09000 PF07683 Cobalamin synthesis protein cobW C-terminal domain D5R55_RS09005 PF02514 CobN/Magnesium Chelatase D5R55_RS09010 PF17863 AAA lid domain D5R55_RS09010 PF13519 von Willebrand factor type A domain D5R55_RS09010 PF07728 AAA domain (dynein-related subfamily) D5R55_RS09020 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 D5R55_RS09035 PF00293 NUDIX domain D5R55_RS09045 PF02515 CoA-transferase family III D5R55_RS09050 PF03600 Citrate transporter D5R55_RS09055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D5R55_RS09055 PF02770 Acyl-CoA dehydrogenase, middle domain D5R55_RS09055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D5R55_RS09065 PF02839 Carbohydrate binding domain D5R55_RS09070 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D5R55_RS09075 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D5R55_RS09080 PF02570 Precorrin-8X methylmutase D5R55_RS09090 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D5R55_RS09095 PF01888 CbiD D5R55_RS09100 PF02571 Precorrin-6x reductase CbiJ/CobK D5R55_RS09105 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D5R55_RS09110 PF07690 Major Facilitator Superfamily D5R55_RS09115 PF01047 MarR family D5R55_RS09145 PF02798 Glutathione S-transferase, N-terminal domain D5R55_RS09155 PF00005 ABC transporter D5R55_RS09155 PF08402 TOBE domain D5R55_RS09160 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS09165 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS09180 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D5R55_RS09180 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D5R55_RS09185 PF02515 CoA-transferase family III D5R55_RS09190 PF00682 HMGL-like D5R55_RS09195 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D5R55_RS09205 PF03466 LysR substrate binding domain D5R55_RS09205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS09210 PF00083 Sugar (and other) transporter D5R55_RS09235 PF01047 MarR family D5R55_RS09255 PF02566 OsmC-like protein D5R55_RS09260 PF01202 Shikimate kinase D5R55_RS09270 PF00155 Aminotransferase class I and II D5R55_RS09270 PF00392 Bacterial regulatory proteins, gntR family D5R55_RS09280 PF03591 AzlC protein D5R55_RS09300 PF16861 Carbamoyltransferase C-terminus D5R55_RS09300 PF02543 Carbamoyltransferase N-terminus D5R55_RS09305 PF00202 Aminotransferase class-III D5R55_RS09330 PF00464 Serine hydroxymethyltransferase D5R55_RS09345 PF00593 TonB dependent receptor D5R55_RS09345 PF07715 TonB-dependent Receptor Plug Domain D5R55_RS09355 PF00873 AcrB/AcrD/AcrF family D5R55_RS09360 PF00005 ABC transporter D5R55_RS09360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D5R55_RS09365 PF12911 N-terminal TM domain of oligopeptide transport permease C D5R55_RS09365 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS09370 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS09375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D5R55_RS09380 PF00593 TonB dependent receptor D5R55_RS09380 PF07715 TonB-dependent Receptor Plug Domain D5R55_RS09385 PF08671 Anti-repressor SinI D5R55_RS09385 PF01381 Helix-turn-helix D5R55_RS09405 PF02472 Biopolymer transport protein ExbD/TolR D5R55_RS09410 PF01618 MotA/TolQ/ExbB proton channel family D5R55_RS09430 PF01544 CorA-like Mg2+ transporter protein D5R55_RS09475 PF00356 Bacterial regulatory proteins, lacI family D5R55_RS09480 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D5R55_RS09480 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D5R55_RS09485 PF07690 Major Facilitator Superfamily D5R55_RS09490 PF00294 pfkB family carbohydrate kinase D5R55_RS09500 PF03466 LysR substrate binding domain D5R55_RS09500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS09505 PF03601 Conserved hypothetical protein 698 D5R55_RS09515 PF00654 Voltage gated chloride channel D5R55_RS09520 PF08361 MAATS-type transcriptional repressor, C-terminal region D5R55_RS09520 PF00440 Bacterial regulatory proteins, tetR family D5R55_RS09525 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D5R55_RS09540 PF07739 TipAS antibiotic-recognition domain D5R55_RS09540 PF13411 MerR HTH family regulatory protein D5R55_RS09550 PF02954 Bacterial regulatory protein, Fis family D5R55_RS09550 PF00158 Sigma-54 interaction domain D5R55_RS09550 PF00072 Response regulator receiver domain D5R55_RS09555 PF00753 Metallo-beta-lactamase superfamily D5R55_RS09565 PF01925 Sulfite exporter TauE/SafE D5R55_RS09570 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS09575 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS09580 PF08402 TOBE domain D5R55_RS09580 PF00005 ABC transporter D5R55_RS09585 PF13416 Bacterial extracellular solute-binding protein D5R55_RS09595 PF03922 OmpW family D5R55_RS09600 PF03060 Nitronate monooxygenase D5R55_RS09605 PF00171 Aldehyde dehydrogenase family D5R55_RS09620 PF01522 Polysaccharide deacetylase D5R55_RS09635 PF06722 Protein of unknown function (DUF1205) D5R55_RS09640 PF00764 Arginosuccinate synthase D5R55_RS09645 PF04055 Radical SAM superfamily D5R55_RS09645 PF06463 Molybdenum Cofactor Synthesis C D5R55_RS09660 PF12848 ABC transporter D5R55_RS09660 PF00005 ABC transporter D5R55_RS09670 PF05170 AsmA family D5R55_RS09675 PF00005 ABC transporter D5R55_RS09680 PF03649 Uncharacterised protein family (UPF0014) D5R55_RS09695 PF00107 Zinc-binding dehydrogenase D5R55_RS09695 PF08240 Alcohol dehydrogenase GroES-like domain D5R55_RS09700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS09700 PF03466 LysR substrate binding domain D5R55_RS09710 PF01053 Cys/Met metabolism PLP-dependent enzyme D5R55_RS09720 PF00294 pfkB family carbohydrate kinase D5R55_RS09725 PF18693 TRAM domain D5R55_RS09725 PF00919 Uncharacterized protein family UPF0004 D5R55_RS09725 PF04055 Radical SAM superfamily D5R55_RS09755 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) D5R55_RS09755 PF04717 Type VI secretion system, phage-baseplate injector D5R55_RS09755 PF13296 Putative type VI secretion system Rhs element Vgr D5R55_RS09765 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE D5R55_RS09785 PF05947 Type VI secretion system, TssF D5R55_RS09795 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath D5R55_RS09805 PF10431 C-terminal, D2-small domain, of ClpB protein D5R55_RS09805 PF17871 AAA lid domain D5R55_RS09805 PF00004 ATPase family associated with various cellular activities (AAA) D5R55_RS09805 PF07724 AAA domain (Cdc48 subfamily) D5R55_RS09810 PF00158 Sigma-54 interaction domain D5R55_RS09810 PF02954 Bacterial regulatory protein, Fis family D5R55_RS09825 PF06744 Type VI secretion protein IcmF C-terminal D5R55_RS09825 PF14331 ImcF-related N-terminal domain D5R55_RS09825 PF06761 Intracellular multiplication and human macrophage-killing D5R55_RS09850 PF04717 Type VI secretion system, phage-baseplate injector D5R55_RS09850 PF13296 Putative type VI secretion system Rhs element Vgr D5R55_RS09850 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) D5R55_RS09855 PF05638 Type VI secretion system effector, Hcp D5R55_RS09880 PF07879 PHB/PHA accumulation regulator DNA-binding domain D5R55_RS09880 PF05233 PHB accumulation regulatory domain D5R55_RS09885 PF00106 short chain dehydrogenase D5R55_RS09890 PF02803 Thiolase, C-terminal domain D5R55_RS09890 PF00108 Thiolase, N-terminal domain D5R55_RS09895 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus D5R55_RS09900 PF02578 Multi-copper polyphenol oxidoreductase laccase D5R55_RS09905 PF00849 RNA pseudouridylate synthase D5R55_RS09905 PF01479 S4 domain D5R55_RS09910 PF13525 Outer membrane lipoprotein D5R55_RS09915 PF04851 Type III restriction enzyme, res subunit D5R55_RS09915 PF13307 Helicase C-terminal domain D5R55_RS09930 PF17674 HHH domain D5R55_RS09930 PF00575 S1 RNA binding domain D5R55_RS09930 PF16921 Tex protein YqgF-like domain D5R55_RS09930 PF09371 Tex-like protein N-terminal domain D5R55_RS09935 PF02705 K+ potassium transporter D5R55_RS09945 PF00156 Phosphoribosyl transferase domain D5R55_RS09950 PF00709 Adenylosuccinate synthetase D5R55_RS09955 PF13393 Histidyl-tRNA synthetase D5R55_RS09965 PF01145 SPFH domain / Band 7 family D5R55_RS09970 PF01145 SPFH domain / Band 7 family D5R55_RS09970 PF12221 Bacterial membrane protein N terminal D5R55_RS09975 PF01926 50S ribosome-binding GTPase D5R55_RS09975 PF13167 GTP-binding GTPase N-terminal D5R55_RS09975 PF16360 GTP-binding GTPase Middle Region D5R55_RS09980 PF17209 Hfq protein D5R55_RS09985 PF01926 50S ribosome-binding GTPase D5R55_RS09985 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal D5R55_RS09995 PF13360 PQQ-like domain D5R55_RS10000 PF09976 Tetratricopeptide repeat-like domain D5R55_RS10005 PF03129 Anticodon binding domain D5R55_RS10005 PF13393 Histidyl-tRNA synthetase D5R55_RS10010 PF04551 GcpE protein D5R55_RS10020 PF04055 Radical SAM superfamily D5R55_RS10025 PF00334 Nucleoside diphosphate kinase D5R55_RS10030 PF01027 Inhibitor of apoptosis-promoting Bax1 D5R55_RS10035 PF05958 tRNA (Uracil-5-)-methyltransferase D5R55_RS10050 PF04545 Sigma-70, region 4 D5R55_RS10050 PF00140 Sigma-70 factor, region 1.2 D5R55_RS10050 PF04542 Sigma-70 region 2 D5R55_RS10050 PF04539 Sigma-70 region 3 D5R55_RS10055 PF01551 Peptidase family M23 D5R55_RS10055 PF01476 LysM domain D5R55_RS10065 PF01975 Survival protein SurE D5R55_RS10070 PF02515 CoA-transferase family III D5R55_RS10075 PF02132 RecR protein D5R55_RS10075 PF13662 Toprim domain D5R55_RS10080 PF02575 YbaB/EbfC DNA-binding family D5R55_RS10085 PF12169 DNA polymerase III subunits gamma and tau domain III D5R55_RS10085 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding D5R55_RS10085 PF12170 DNA polymerase III tau subunit V interacting with alpha D5R55_RS10095 PF00085 Thioredoxin D5R55_RS10100 PF07498 Rho termination factor, N-terminal domain D5R55_RS10100 PF07497 Rho termination factor, RNA-binding domain D5R55_RS10100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D5R55_RS10105 PF13411 MerR HTH family regulatory protein D5R55_RS10110 PF07690 Major Facilitator Superfamily D5R55_RS10115 PF06167 Glucose-regulated metallo-peptidase M90 D5R55_RS10120 PF01197 Ribosomal protein L31 D5R55_RS10135 PF01554 MatE D5R55_RS10140 PF04055 Radical SAM superfamily D5R55_RS10145 PF00561 alpha/beta hydrolase fold D5R55_RS10145 PF00364 Biotin-requiring enzyme D5R55_RS10150 PF02780 Transketolase, C-terminal domain D5R55_RS10150 PF02779 Transketolase, pyrimidine binding domain D5R55_RS10155 PF00676 Dehydrogenase E1 component D5R55_RS10160 PF01513 ATP-NAD kinase D5R55_RS10165 PF02954 Bacterial regulatory protein, Fis family D5R55_RS10165 PF00158 Sigma-54 interaction domain D5R55_RS10165 PF01590 GAF domain D5R55_RS10170 PF02627 Carboxymuconolactone decarboxylase family D5R55_RS10190 PF10431 C-terminal, D2-small domain, of ClpB protein D5R55_RS10190 PF07724 AAA domain (Cdc48 subfamily) D5R55_RS10190 PF02861 Clp amino terminal domain, pathogenicity island component D5R55_RS10190 PF00004 ATPase family associated with various cellular activities (AAA) D5R55_RS10190 PF17871 AAA lid domain D5R55_RS10195 PF02082 Transcriptional regulator D5R55_RS10205 PF01152 Bacterial-like globin D5R55_RS10210 PF02391 MoaE protein D5R55_RS10215 PF02597 ThiS family D5R55_RS10220 PF03453 MoeA N-terminal region (domain I and II) D5R55_RS10220 PF00994 Probable molybdopterin binding domain D5R55_RS10220 PF03454 MoeA C-terminal region (domain IV) D5R55_RS10225 PF00291 Pyridoxal-phosphate dependent enzyme D5R55_RS10225 PF14821 Threonine synthase N terminus D5R55_RS10230 PF03447 Homoserine dehydrogenase, NAD binding domain D5R55_RS10230 PF00742 Homoserine dehydrogenase D5R55_RS10230 PF01842 ACT domain D5R55_RS10235 PF00155 Aminotransferase class I and II D5R55_RS10245 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase D5R55_RS10250 PF00892 EamA-like transporter family D5R55_RS10255 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D5R55_RS10260 PF00535 Glycosyl transferase family 2 D5R55_RS10265 PF01370 NAD dependent epimerase/dehydratase family D5R55_RS10265 PF02911 Formyl transferase, C-terminal domain D5R55_RS10265 PF00551 Formyl transferase D5R55_RS10270 PF00551 Formyl transferase D5R55_RS10270 PF02911 Formyl transferase, C-terminal domain D5R55_RS10270 PF01370 NAD dependent epimerase/dehydratase family D5R55_RS10275 PF01522 Polysaccharide deacetylase D5R55_RS10280 PF00578 AhpC/TSA family D5R55_RS10290 PF02562 PhoH-like protein D5R55_RS10290 PF13638 PIN domain D5R55_RS10295 PF00877 NlpC/P60 family D5R55_RS10300 PF01384 Phosphate transporter family D5R55_RS10310 PF00772 DnaB-like helicase N terminal domain D5R55_RS10310 PF03796 DnaB-like helicase C terminal domain D5R55_RS10315 PF01281 Ribosomal protein L9, N-terminal domain D5R55_RS10315 PF03948 Ribosomal protein L9, C-terminal domain D5R55_RS10320 PF01084 Ribosomal protein S18 D5R55_RS10330 PF01250 Ribosomal protein S6 D5R55_RS10340 PF04542 Sigma-70 region 2 D5R55_RS10340 PF08281 Sigma-70, region 4 D5R55_RS10345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS10345 PF03466 LysR substrate binding domain D5R55_RS10350 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D5R55_RS10350 PF00205 Thiamine pyrophosphate enzyme, central domain D5R55_RS10350 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D5R55_RS10355 PF01261 Xylose isomerase-like TIM barrel D5R55_RS10360 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D5R55_RS10360 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D5R55_RS10365 PF01476 LysM domain D5R55_RS10365 PF04972 BON domain D5R55_RS10370 PF17763 Glutaminase/Asparaginase C-terminal domain D5R55_RS10370 PF00710 Asparaginase, N-terminal D5R55_RS10395 PF13439 Glycosyltransferase Family 4 D5R55_RS10400 PF02463 RecF/RecN/SMC N terminal domain D5R55_RS10420 PF01026 TatD related DNase D5R55_RS10425 PF09115 DNA polymerase III, delta subunit, C terminal D5R55_RS10430 PF02223 Thymidylate kinase D5R55_RS10435 PF02618 YceG-like family D5R55_RS10440 PF01571 Aminomethyltransferase folate-binding domain D5R55_RS10450 PF13673 Acetyltransferase (GNAT) domain D5R55_RS10455 PF07859 alpha/beta hydrolase fold D5R55_RS10515 PF00990 Diguanylate cyclase, GGDEF domain D5R55_RS10515 PF00360 Phytochrome region D5R55_RS10515 PF00563 EAL domain D5R55_RS10515 PF01590 GAF domain D5R55_RS10530 PF00990 Diguanylate cyclase, GGDEF domain D5R55_RS10530 PF00072 Response regulator receiver domain D5R55_RS10535 PF00108 Thiolase, N-terminal domain D5R55_RS10535 PF02803 Thiolase, C-terminal domain D5R55_RS10540 PF00857 Isochorismatase family D5R55_RS10545 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D5R55_RS10545 PF00378 Enoyl-CoA hydratase/isomerase D5R55_RS10545 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D5R55_RS10550 PF00501 AMP-binding enzyme D5R55_RS10550 PF13193 AMP-binding enzyme C-terminal domain D5R55_RS10555 PF02696 Uncharacterized ACR, YdiU/UPF0061 family D5R55_RS10560 PF01641 SelR domain D5R55_RS10565 PF04279 Intracellular septation protein A D5R55_RS10570 PF01722 BolA-like protein D5R55_RS10580 PF13508 Acetyltransferase (GNAT) domain D5R55_RS10585 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain D5R55_RS10585 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal D5R55_RS10585 PF02769 AIR synthase related protein, C-terminal domain D5R55_RS10590 PF01266 FAD dependent oxidoreductase D5R55_RS10595 PF01256 Carbohydrate kinase D5R55_RS10600 PF00342 Phosphoglucose isomerase D5R55_RS10605 PF00005 ABC transporter D5R55_RS10610 PF13472 GDSL-like Lipase/Acylhydrolase family D5R55_RS10615 PF00639 PPIC-type PPIASE domain D5R55_RS10630 PF05362 Lon protease (S16) C-terminal proteolytic domain D5R55_RS10630 PF02190 ATP-dependent protease La (LON) substrate-binding domain D5R55_RS10630 PF00004 ATPase family associated with various cellular activities (AAA) D5R55_RS10635 PF10431 C-terminal, D2-small domain, of ClpB protein D5R55_RS10635 PF07724 AAA domain (Cdc48 subfamily) D5R55_RS10635 PF06689 ClpX C4-type zinc finger D5R55_RS10640 PF00574 Clp protease D5R55_RS10645 PF05698 Bacterial trigger factor protein (TF) C-terminus D5R55_RS10645 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D5R55_RS10645 PF05697 Bacterial trigger factor protein (TF) D5R55_RS10655 PF02595 Glycerate kinase family D5R55_RS10665 PF02558 Ketopantoate reductase PanE/ApbA D5R55_RS10665 PF08546 Ketopantoate reductase PanE/ApbA C terminal D5R55_RS10690 PF00850 Histone deacetylase domain D5R55_RS10710 PF11480 Colicin-E5 Imm protein D5R55_RS10715 PF12106 Colicin E5 ribonuclease domain D5R55_RS10715 PF13332 Hemagglutinin repeat D5R55_RS10740 PF00589 Phage integrase family D5R55_RS10740 PF13356 Arm DNA-binding domain D5R55_RS10775 PF00486 Transcriptional regulatory protein, C terminal D5R55_RS10775 PF00072 Response regulator receiver domain D5R55_RS10780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS10780 PF00672 HAMP domain D5R55_RS10780 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS10785 PF00578 AhpC/TSA family D5R55_RS10790 PF02627 Carboxymuconolactone decarboxylase family D5R55_RS10795 PF02542 YgbB family D5R55_RS10800 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase D5R55_RS10805 PF17757 UvrB interaction domain D5R55_RS10805 PF03461 TRCF domain D5R55_RS10805 PF00271 Helicase conserved C-terminal domain D5R55_RS10805 PF00270 DEAD/DEAH box helicase D5R55_RS10805 PF02559 CarD-like/TRCF domain D5R55_RS10810 PF01546 Peptidase family M20/M25/M40 D5R55_RS10810 PF07687 Peptidase dimerisation domain D5R55_RS10815 PF00291 Pyridoxal-phosphate dependent enzyme D5R55_RS10825 PF00905 Penicillin binding protein transpeptidase domain D5R55_RS10825 PF00912 Transglycosylase D5R55_RS10825 PF17092 Penicillin-binding protein OB-like domain D5R55_RS10840 PF01741 Large-conductance mechanosensitive channel, MscL D5R55_RS10850 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D5R55_RS10850 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D5R55_RS10855 PF07311 Dodecin D5R55_RS10860 PF03466 LysR substrate binding domain D5R55_RS10860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS10865 PF01979 Amidohydrolase family D5R55_RS10875 PF00576 HIUase/Transthyretin family D5R55_RS10895 PF01042 Endoribonuclease L-PSP D5R55_RS10900 PF03466 LysR substrate binding domain D5R55_RS10900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS10905 PF04115 Ureidoglycolate lyase D5R55_RS10910 PF03561 Allantoicase repeat D5R55_RS10915 PF09349 OHCU decarboxylase D5R55_RS10915 PF01014 Uricase D5R55_RS10925 PF01177 Asp/Glu/Hydantoin racemase D5R55_RS10930 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin D5R55_RS10940 PF17676 LD-carboxypeptidase C-terminal domain D5R55_RS10940 PF02016 LD-carboxypeptidase N-terminal domain D5R55_RS10945 PF14437 MafB19-like deaminase D5R55_RS10950 PF09350 Domain of unknown function (DUF1992) D5R55_RS10960 PF00392 Bacterial regulatory proteins, gntR family D5R55_RS10960 PF07702 UTRA domain D5R55_RS10965 PF00890 FAD binding domain D5R55_RS10965 PF02910 Fumarate reductase flavoprotein C-term D5R55_RS10990 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D5R55_RS10990 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D5R55_RS10995 PF00293 NUDIX domain D5R55_RS10995 PF13344 Haloacid dehalogenase-like hydrolase D5R55_RS11000 PF13673 Acetyltransferase (GNAT) domain D5R55_RS11010 PF07733 Bacterial DNA polymerase III alpha NTPase domain D5R55_RS11010 PF14579 Helix-hairpin-helix motif D5R55_RS11010 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D5R55_RS11010 PF00929 Exonuclease D5R55_RS11010 PF02811 PHP domain D5R55_RS11015 PF00696 Amino acid kinase family D5R55_RS11015 PF01472 PUA domain D5R55_RS11040 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain D5R55_RS11040 PF00391 PEP-utilising enzyme, mobile domain D5R55_RS11045 PF02896 PEP-utilising enzyme, TIM barrel domain D5R55_RS11045 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain D5R55_RS11045 PF00391 PEP-utilising enzyme, mobile domain D5R55_RS11050 PF02223 Thymidylate kinase D5R55_RS11055 PF01494 FAD binding domain D5R55_RS11065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS11065 PF03466 LysR substrate binding domain D5R55_RS11070 PF13086 AAA domain D5R55_RS11070 PF13087 AAA domain D5R55_RS11070 PF13195 Protein of unknown function (DUF4011) D5R55_RS11075 PF00117 Glutamine amidotransferase class-I D5R55_RS11075 PF02540 NAD synthase D5R55_RS11075 PF00958 GMP synthase C terminal domain D5R55_RS11085 PF00571 CBS domain D5R55_RS11085 PF00478 IMP dehydrogenase / GMP reductase domain D5R55_RS11115 PF00892 EamA-like transporter family D5R55_RS11120 PF03658 RnfH family Ubiquitin D5R55_RS11130 PF01668 SmpB protein D5R55_RS11135 PF16200 C-terminal region of band_7 D5R55_RS11135 PF01145 SPFH domain / Band 7 family D5R55_RS11145 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain D5R55_RS11145 PF02896 PEP-utilising enzyme, TIM barrel domain D5R55_RS11145 PF00391 PEP-utilising enzyme, mobile domain D5R55_RS11155 PF03618 Kinase/pyrophosphorylase D5R55_RS11160 PF08032 RNA 2'-O ribose methyltransferase substrate binding D5R55_RS11160 PF00588 SpoU rRNA Methylase family D5R55_RS11165 PF01351 Ribonuclease HII D5R55_RS11170 PF02684 Lipid-A-disaccharide synthetase D5R55_RS11175 PF00132 Bacterial transferase hexapeptide (six repeats) D5R55_RS11175 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 D5R55_RS11180 PF07977 FabA-like domain D5R55_RS11185 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD D5R55_RS11185 PF00132 Bacterial transferase hexapeptide (six repeats) D5R55_RS11195 PF01103 Surface antigen D5R55_RS11195 PF07244 Surface antigen variable number repeat D5R55_RS11200 PF17820 PDZ domain D5R55_RS11200 PF02163 Peptidase family M50 D5R55_RS11205 PF13288 DXP reductoisomerase C-terminal domain D5R55_RS11205 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase D5R55_RS11205 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain D5R55_RS11215 PF01255 Putative undecaprenyl diphosphate synthase D5R55_RS11220 PF01765 Ribosome recycling factor D5R55_RS11225 PF00696 Amino acid kinase family D5R55_RS11230 PF00889 Elongation factor TS D5R55_RS11235 PF00318 Ribosomal protein S2 D5R55_RS11245 PF00557 Metallopeptidase family M24 D5R55_RS11250 PF08335 GlnD PII-uridylyltransferase D5R55_RS11250 PF01966 HD domain D5R55_RS11250 PF01909 Nucleotidyltransferase domain D5R55_RS11255 PF01479 S4 domain D5R55_RS11255 PF00849 RNA pseudouridylate synthase D5R55_RS11260 PF01327 Polypeptide deformylase D5R55_RS11265 PF12826 Helix-hairpin-helix motif D5R55_RS11265 PF03119 NAD-dependent DNA ligase C4 zinc finger domain D5R55_RS11265 PF03120 NAD-dependent DNA ligase OB-fold domain D5R55_RS11265 PF00533 BRCA1 C Terminus (BRCT) domain D5R55_RS11265 PF01653 NAD-dependent DNA ligase adenylation domain D5R55_RS11275 PF02463 RecF/RecN/SMC N terminal domain D5R55_RS11275 PF06470 SMC proteins Flexible Hinge Domain D5R55_RS11285 PF00155 Aminotransferase class I and II D5R55_RS11290 PF14602 Hexapeptide repeat of succinyl-transferase D5R55_RS11290 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal D5R55_RS11290 PF00132 Bacterial transferase hexapeptide (six repeats) D5R55_RS11295 PF03960 ArsC family D5R55_RS11300 PF07687 Peptidase dimerisation domain D5R55_RS11300 PF01546 Peptidase family M20/M25/M40 D5R55_RS11305 PF05175 Methyltransferase small domain D5R55_RS11310 PF13091 PLD-like domain D5R55_RS11315 PF00255 Glutathione peroxidase D5R55_RS11320 PF00005 ABC transporter D5R55_RS11320 PF12848 ABC transporter D5R55_RS11330 PF18073 Rubredoxin metal binding domain D5R55_RS11335 PF01168 Alanine racemase, N-terminal domain D5R55_RS11335 PF00842 Alanine racemase, C-terminal domain D5R55_RS11340 PF07690 Major Facilitator Superfamily D5R55_RS11345 PF08543 Phosphomethylpyrimidine kinase D5R55_RS11355 PF03167 Uracil DNA glycosylase superfamily D5R55_RS11365 PF00814 Glycoprotease family D5R55_RS11375 PF00271 Helicase conserved C-terminal domain D5R55_RS11375 PF00270 DEAD/DEAH box helicase D5R55_RS11385 PF00463 Isocitrate lyase family D5R55_RS11390 PF00582 Universal stress protein family D5R55_RS11395 PF03466 LysR substrate binding domain D5R55_RS11395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS11400 PF13419 Haloacid dehalogenase-like hydrolase D5R55_RS11405 PF01274 Malate synthase D5R55_RS11410 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like D5R55_RS11415 PF12833 Helix-turn-helix domain D5R55_RS11415 PF02311 AraC-like ligand binding domain D5R55_RS11460 PF00749 tRNA synthetases class I (E and Q), catalytic domain D5R55_RS11465 PF01734 Patatin-like phospholipase D5R55_RS11470 PF00877 NlpC/P60 family D5R55_RS11475 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D5R55_RS11475 PF00005 ABC transporter D5R55_RS11480 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS11480 PF12911 N-terminal TM domain of oligopeptide transport permease C D5R55_RS11485 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS11490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D5R55_RS11500 PF00072 Response regulator receiver domain D5R55_RS11500 PF00486 Transcriptional regulatory protein, C terminal D5R55_RS11505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS11505 PF11808 Phosphate regulon sensor protein PhoR D5R55_RS11505 PF00989 PAS fold D5R55_RS11505 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS11510 PF00072 Response regulator receiver domain D5R55_RS11510 PF00486 Transcriptional regulatory protein, C terminal D5R55_RS11520 PF03626 Prokaryotic Cytochrome C oxidase subunit IV D5R55_RS11525 PF00510 Cytochrome c oxidase subunit III D5R55_RS11530 PF00115 Cytochrome C and Quinol oxidase polypeptide I D5R55_RS11535 PF06481 COX Aromatic Rich Motif D5R55_RS11535 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D5R55_RS11540 PF00361 Proton-conducting membrane transporter D5R55_RS11540 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus D5R55_RS11550 PF04820 Tryptophan halogenase D5R55_RS11555 PF08241 Methyltransferase domain D5R55_RS11570 PF00109 Beta-ketoacyl synthase, N-terminal domain D5R55_RS11570 PF02801 Beta-ketoacyl synthase, C-terminal domain D5R55_RS11575 PF02801 Beta-ketoacyl synthase, C-terminal domain D5R55_RS11575 PF00109 Beta-ketoacyl synthase, N-terminal domain D5R55_RS11590 PF00109 Beta-ketoacyl synthase, N-terminal domain D5R55_RS11590 PF02801 Beta-ketoacyl synthase, C-terminal domain D5R55_RS11610 PF00221 Aromatic amino acid lyase D5R55_RS11620 PF07977 FabA-like domain D5R55_RS11630 PF00550 Phosphopantetheine attachment site D5R55_RS11660 PF13840 ACT domain D5R55_RS11660 PF01842 ACT domain D5R55_RS11660 PF00696 Amino acid kinase family D5R55_RS11665 PF01171 PP-loop family D5R55_RS11665 PF09179 TilS substrate binding domain D5R55_RS11665 PF11734 TilS substrate C-terminal domain D5R55_RS11670 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit D5R55_RS11680 PF01406 tRNA synthetases class I (C) catalytic domain D5R55_RS11680 PF09190 DALR domain D5R55_RS11695 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D5R55_RS11700 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D5R55_RS11705 PF00149 Calcineurin-like phosphoesterase D5R55_RS11710 PF00132 Bacterial transferase hexapeptide (six repeats) D5R55_RS11715 PF00588 SpoU rRNA Methylase family D5R55_RS11720 PF00459 Inositol monophosphatase family D5R55_RS11740 PF05192 MutS domain III D5R55_RS11740 PF00488 MutS domain V D5R55_RS11740 PF05190 MutS family domain IV D5R55_RS11740 PF05188 MutS domain II D5R55_RS11740 PF01624 MutS domain I D5R55_RS11750 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D5R55_RS11755 PF08007 Cupin superfamily protein D5R55_RS11770 PF00753 Metallo-beta-lactamase superfamily D5R55_RS11775 PF06804 NlpB/DapX lipoprotein D5R55_RS11780 PF00701 Dihydrodipicolinate synthetase family D5R55_RS11790 PF00579 tRNA synthetases class I (W and Y) D5R55_RS11795 PF02163 Peptidase family M50 D5R55_RS11800 PF01300 Telomere recombination D5R55_RS11805 PF02811 PHP domain D5R55_RS11810 PF00561 alpha/beta hydrolase fold D5R55_RS11815 PF04305 Protein of unknown function (DUF455) D5R55_RS11820 PF00132 Bacterial transferase hexapeptide (six repeats) D5R55_RS11825 PF01430 Hsp33 protein D5R55_RS11835 PF04977 Septum formation initiator D5R55_RS11840 PF00113 Enolase, C-terminal TIM barrel domain D5R55_RS11840 PF03952 Enolase, N-terminal domain D5R55_RS11845 PF00793 DAHP synthetase I family D5R55_RS11850 PF00117 Glutamine amidotransferase class-I D5R55_RS11850 PF06418 CTP synthase N-terminus D5R55_RS11860 PF00753 Metallo-beta-lactamase superfamily D5R55_RS11860 PF03772 Competence protein D5R55_RS11865 PF01026 TatD related DNase D5R55_RS11870 PF00005 ABC transporter D5R55_RS11875 PF02687 FtsX-like permease family D5R55_RS11875 PF12704 MacB-like periplasmic core domain D5R55_RS11885 PF01368 DHH family D5R55_RS11885 PF02272 DHHA1 domain D5R55_RS11885 PF17768 RecJ OB domain D5R55_RS11895 PF01336 OB-fold nucleic acid binding domain D5R55_RS11895 PF00152 tRNA synthetases class II (D, K and N) D5R55_RS11905 PF04384 Iron-sulphur cluster assembly D5R55_RS11910 PF00111 2Fe-2S iron-sulfur cluster binding domain D5R55_RS11915 PF00012 Hsp70 protein D5R55_RS11920 PF07743 HSCB C-terminal oligomerisation domain D5R55_RS11925 PF01521 Iron-sulphur cluster biosynthesis D5R55_RS11930 PF01592 NifU-like N terminal domain D5R55_RS11935 PF00266 Aminotransferase class-V D5R55_RS11940 PF02082 Transcriptional regulator D5R55_RS11945 PF01451 Low molecular weight phosphotyrosine protein phosphatase D5R55_RS11955 PF02589 LUD domain D5R55_RS11955 PF11870 Domain of unknown function (DUF3390) D5R55_RS11955 PF13183 4Fe-4S dicluster domain D5R55_RS11960 PF02754 Cysteine-rich domain D5R55_RS11965 PF09339 IclR helix-turn-helix domain D5R55_RS11965 PF01614 Bacterial transcriptional regulator D5R55_RS11970 PF00768 D-alanyl-D-alanine carboxypeptidase D5R55_RS11975 PF09361 Phasin protein D5R55_RS11980 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D5R55_RS11980 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5R55_RS11990 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D5R55_RS11990 PF00364 Biotin-requiring enzyme D5R55_RS11990 PF02817 e3 binding domain D5R55_RS11995 PF00456 Transketolase, thiamine diphosphate binding domain D5R55_RS11995 PF17831 Pyruvate dehydrogenase E1 component middle domain D5R55_RS12005 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS12005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS12005 PF00989 PAS fold D5R55_RS12010 PF00196 Bacterial regulatory proteins, luxR family D5R55_RS12010 PF00072 Response regulator receiver domain D5R55_RS12015 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain D5R55_RS12015 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain D5R55_RS12020 PF01432 Peptidase family M3 D5R55_RS12025 PF11799 impB/mucB/samB family C-terminal domain D5R55_RS12025 PF00817 impB/mucB/samB family D5R55_RS12030 PF01177 Asp/Glu/Hydantoin racemase D5R55_RS12045 PF00326 Prolyl oligopeptidase family D5R55_RS12045 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain D5R55_RS12050 PF00072 Response regulator receiver domain D5R55_RS12050 PF00158 Sigma-54 interaction domain D5R55_RS12050 PF02954 Bacterial regulatory protein, Fis family D5R55_RS12055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS12055 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS12055 PF00989 PAS fold D5R55_RS12060 PF00120 Glutamine synthetase, catalytic domain D5R55_RS12060 PF03951 Glutamine synthetase, beta-Grasp domain D5R55_RS12070 PF00994 Probable molybdopterin binding domain D5R55_RS12070 PF02464 Competence-damaged protein D5R55_RS12070 PF18146 Damage-inducible protein CinA KH domain D5R55_RS12090 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold D5R55_RS12090 PF00271 Helicase conserved C-terminal domain D5R55_RS12090 PF04408 Helicase associated domain (HA2) D5R55_RS12090 PF00270 DEAD/DEAH box helicase D5R55_RS12090 PF11898 Domain of unknown function (DUF3418) D5R55_RS12095 PF00583 Acetyltransferase (GNAT) family D5R55_RS12095 PF00696 Amino acid kinase family D5R55_RS12100 PF04362 Bacterial Fe(2+) trafficking D5R55_RS12105 PF07690 Major Facilitator Superfamily D5R55_RS12105 PF00083 Sugar (and other) transporter D5R55_RS12110 PF02515 CoA-transferase family III D5R55_RS12115 PF18158 Adaptive response protein AidB N-terminal domain D5R55_RS12115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D5R55_RS12115 PF02770 Acyl-CoA dehydrogenase, middle domain D5R55_RS12120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS12120 PF03466 LysR substrate binding domain D5R55_RS12135 PF00202 Aminotransferase class-III D5R55_RS12140 PF00120 Glutamine synthetase, catalytic domain D5R55_RS12145 PF07722 Peptidase C26 D5R55_RS12165 PF01979 Amidohydrolase family D5R55_RS12175 PF17391 Urocanase N-terminal domain D5R55_RS12175 PF01175 Urocanase Rossmann-like domain D5R55_RS12175 PF17392 Urocanase C-terminal domain D5R55_RS12180 PF07702 UTRA domain D5R55_RS12180 PF00392 Bacterial regulatory proteins, gntR family D5R55_RS12185 PF00221 Aromatic amino acid lyase D5R55_RS12190 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5R55_RS12205 PF03466 LysR substrate binding domain D5R55_RS12205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS12215 PF00875 DNA photolyase D5R55_RS12215 PF03441 FAD binding domain of DNA photolyase D5R55_RS12235 PF07690 Major Facilitator Superfamily D5R55_RS12240 PF10282 Lactonase, 7-bladed beta-propeller D5R55_RS12245 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term D5R55_RS12245 PF12833 Helix-turn-helix domain D5R55_RS12265 PF02342 TerD domain D5R55_RS12275 PF10138 vWA found in TerF C terminus D5R55_RS12395 PF13356 Arm DNA-binding domain D5R55_RS12395 PF00589 Phage integrase family D5R55_RS12400 PF00474 Sodium:solute symporter family D5R55_RS12410 PF16177 Acetyl-coenzyme A synthetase N-terminus D5R55_RS12410 PF00501 AMP-binding enzyme D5R55_RS12410 PF13193 AMP-binding enzyme C-terminal domain D5R55_RS12425 PF03350 Uncharacterized protein family, UPF0114 D5R55_RS12435 PF00210 Ferritin-like domain D5R55_RS12440 PF01177 Asp/Glu/Hydantoin racemase D5R55_RS12455 PF01618 MotA/TolQ/ExbB proton channel family D5R55_RS12460 PF02472 Biopolymer transport protein ExbD/TolR D5R55_RS12465 PF03466 LysR substrate binding domain D5R55_RS12465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS12470 PF05726 Pirin C-terminal cupin domain D5R55_RS12470 PF02678 Pirin D5R55_RS12480 PF10636 Hemin uptake protein hemP D5R55_RS12495 PF03239 Iron permease FTR1 family D5R55_RS12500 PF13473 Cupredoxin-like domain D5R55_RS12505 PF10634 Fe2+ transport protein D5R55_RS12510 PF04851 Type III restriction enzyme, res subunit D5R55_RS12510 PF02151 UvrB/uvrC motif D5R55_RS12510 PF12344 Ultra-violet resistance protein B D5R55_RS12510 PF17757 UvrB interaction domain D5R55_RS12510 PF00271 Helicase conserved C-terminal domain D5R55_RS12520 PF00155 Aminotransferase class I and II D5R55_RS12530 PF00248 Aldo/keto reductase family D5R55_RS12535 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ D5R55_RS12550 PF00376 MerR family regulatory protein D5R55_RS12550 PF09278 MerR, DNA binding D5R55_RS12585 PF00196 Bacterial regulatory proteins, luxR family D5R55_RS12600 PF18027 Cytosolic carboxypeptidase N-terminal domain D5R55_RS12600 PF00246 Zinc carboxypeptidase D5R55_RS12605 PF03883 Peroxide stress protein YaaA D5R55_RS12615 PF00155 Aminotransferase class I and II D5R55_RS12620 PF00043 Glutathione S-transferase, C-terminal domain D5R55_RS12620 PF13417 Glutathione S-transferase, N-terminal domain D5R55_RS12625 PF00378 Enoyl-CoA hydratase/isomerase D5R55_RS12630 PF02798 Glutathione S-transferase, N-terminal domain D5R55_RS12630 PF00043 Glutathione S-transferase, C-terminal domain D5R55_RS12635 PF01575 MaoC like domain D5R55_RS12645 PF02770 Acyl-CoA dehydrogenase, middle domain D5R55_RS12645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D5R55_RS12645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D5R55_RS12650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D5R55_RS12650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D5R55_RS12650 PF02770 Acyl-CoA dehydrogenase, middle domain D5R55_RS12660 PF00293 NUDIX domain D5R55_RS12670 PF00361 Proton-conducting membrane transporter D5R55_RS12675 PF00361 Proton-conducting membrane transporter D5R55_RS12675 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus D5R55_RS12680 PF00361 Proton-conducting membrane transporter D5R55_RS12680 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D5R55_RS12685 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L D5R55_RS12690 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 D5R55_RS12695 PF12838 4Fe-4S dicluster domain D5R55_RS12700 PF00146 NADH dehydrogenase D5R55_RS12705 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal D5R55_RS12705 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region D5R55_RS12705 PF00384 Molybdopterin oxidoreductase D5R55_RS12710 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D5R55_RS12710 PF10531 SLBB domain D5R55_RS12710 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region D5R55_RS12720 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit D5R55_RS12725 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit D5R55_RS12730 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit D5R55_RS12735 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 D5R55_RS12745 PF03840 Preprotein translocase SecG subunit D5R55_RS12750 PF00121 Triosephosphate isomerase D5R55_RS12755 PF08659 KR domain D5R55_RS12755 PF00698 Acyl transferase domain D5R55_RS12755 PF14765 Polyketide synthase dehydratase D5R55_RS12755 PF00550 Phosphopantetheine attachment site D5R55_RS12755 PF08240 Alcohol dehydrogenase GroES-like domain D5R55_RS12760 PF03725 3' exoribonuclease family, domain 2 D5R55_RS12760 PF01138 3' exoribonuclease family, domain 1 D5R55_RS12760 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain D5R55_RS12760 PF00013 KH domain D5R55_RS12760 PF00575 S1 RNA binding domain D5R55_RS12770 PF00312 Ribosomal protein S15 D5R55_RS12775 PF13458 Periplasmic binding protein D5R55_RS12785 PF00484 Carbonic anhydrase D5R55_RS12790 PF00916 Sulfate permease family D5R55_RS12790 PF01740 STAS domain D5R55_RS12795 PF08502 LeuA allosteric (dimerisation) domain D5R55_RS12795 PF00682 HMGL-like D5R55_RS12805 PF01066 CDP-alcohol phosphatidyltransferase D5R55_RS12810 PF02666 Phosphatidylserine decarboxylase D5R55_RS12815 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain D5R55_RS12815 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain D5R55_RS12820 PF10369 Small subunit of acetolactate synthase D5R55_RS12825 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D5R55_RS12825 PF00205 Thiamine pyrophosphate enzyme, central domain D5R55_RS12825 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D5R55_RS12855 PF00534 Glycosyl transferases group 1 D5R55_RS12855 PF13439 Glycosyltransferase Family 4 D5R55_RS12860 PF01219 Prokaryotic diacylglycerol kinase D5R55_RS12865 PF00440 Bacterial regulatory proteins, tetR family D5R55_RS12865 PF08360 QacR-like protein, C-terminal region D5R55_RS12870 PF03641 Possible lysine decarboxylase D5R55_RS12880 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase D5R55_RS12890 PF02272 DHHA1 domain D5R55_RS12890 PF01411 tRNA synthetases class II (A) D5R55_RS12890 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D5R55_RS12910 PF00893 Small Multidrug Resistance protein D5R55_RS12920 PF00486 Transcriptional regulatory protein, C terminal D5R55_RS12920 PF00072 Response regulator receiver domain D5R55_RS12925 PF13493 Domain of unknown function (DUF4118) D5R55_RS12925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS12925 PF02702 Osmosensitive K+ channel His kinase sensor domain D5R55_RS12925 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS12925 PF13492 GAF domain D5R55_RS12930 PF02669 K+-transporting ATPase, c chain D5R55_RS12940 PF03814 Potassium-transporting ATPase A subunit D5R55_RS12950 PF00107 Zinc-binding dehydrogenase D5R55_RS12950 PF08240 Alcohol dehydrogenase GroES-like domain D5R55_RS12970 PF02142 MGS-like domain D5R55_RS12975 PF00106 short chain dehydrogenase D5R55_RS12985 PF01709 Transcriptional regulator D5R55_RS12990 PF02843 Phosphoribosylglycinamide synthetase, C domain D5R55_RS12990 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain D5R55_RS12990 PF02844 Phosphoribosylglycinamide synthetase, N domain D5R55_RS12995 PF01218 Coproporphyrinogen III oxidase D5R55_RS13000 PF01467 Cytidylyltransferase-like D5R55_RS13010 PF02590 Predicted SPOUT methyltransferase D5R55_RS13015 PF02545 Maf-like protein D5R55_RS13020 PF00575 S1 RNA binding domain D5R55_RS13020 PF10150 Ribonuclease E/G family D5R55_RS13035 PF04320 Protein with unknown function (DUF469) D5R55_RS13050 PF07690 Major Facilitator Superfamily D5R55_RS13065 PF00664 ABC transporter transmembrane region D5R55_RS13065 PF00005 ABC transporter D5R55_RS13070 PF00535 Glycosyl transferase family 2 D5R55_RS13075 PF00535 Glycosyl transferase family 2 D5R55_RS13085 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D5R55_RS13095 PF01336 OB-fold nucleic acid binding domain D5R55_RS13095 PF02811 PHP domain D5R55_RS13095 PF07733 Bacterial DNA polymerase III alpha NTPase domain D5R55_RS13095 PF14579 Helix-hairpin-helix motif D5R55_RS13095 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D5R55_RS13100 PF17773 UPF0176 acylphosphatase like domain D5R55_RS13105 PF00749 tRNA synthetases class I (E and Q), catalytic domain D5R55_RS13110 PF00270 DEAD/DEAH box helicase D5R55_RS13110 PF00271 Helicase conserved C-terminal domain D5R55_RS13120 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme D5R55_RS13130 PF01370 NAD dependent epimerase/dehydratase family D5R55_RS13130 PF02222 ATP-grasp domain D5R55_RS13140 PF17854 FtsK alpha domain D5R55_RS13140 PF09397 Ftsk gamma domain D5R55_RS13140 PF01580 FtsK/SpoIIIE family D5R55_RS13140 PF13491 4TM region of DNA translocase FtsK/SpoIIIE D5R55_RS13145 PF10282 Lactonase, 7-bladed beta-propeller D5R55_RS13155 PF00723 Glycosyl hydrolases family 15 D5R55_RS13165 PF00440 Bacterial regulatory proteins, tetR family D5R55_RS13165 PF17938 Tetracyclin repressor-like, C-terminal domain D5R55_RS13170 PF04060 Putative Fe-S cluster D5R55_RS13175 PF10576 Iron-sulfur binding domain of endonuclease III D5R55_RS13175 PF00633 Helix-hairpin-helix motif D5R55_RS13175 PF00730 HhH-GPD superfamily base excision DNA repair protein D5R55_RS13180 PF00892 EamA-like transporter family D5R55_RS13190 PF00034 Cytochrome c D5R55_RS13195 PF00034 Cytochrome c D5R55_RS13200 PF01434 Peptidase family M41 D5R55_RS13200 PF00004 ATPase family associated with various cellular activities (AAA) D5R55_RS13200 PF17862 AAA+ lid domain D5R55_RS13210 PF03594 Benzoate membrane transport protein D5R55_RS13215 PF00923 Transaldolase/Fructose-6-phosphate aldolase D5R55_RS13225 PF00474 Sodium:solute symporter family D5R55_RS13235 PF13847 Methyltransferase domain D5R55_RS13275 PF04345 Chorismate lyase D5R55_RS13280 PF00183 Hsp90 protein D5R55_RS13280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS13285 PF00392 Bacterial regulatory proteins, gntR family D5R55_RS13285 PF00155 Aminotransferase class I and II D5R55_RS13295 PF00892 EamA-like transporter family D5R55_RS13300 PF00155 Aminotransferase class I and II D5R55_RS13310 PF02567 Phenazine biosynthesis-like protein D5R55_RS13320 PF08448 PAS fold D5R55_RS13320 PF08447 PAS fold D5R55_RS13320 PF00990 Diguanylate cyclase, GGDEF domain D5R55_RS13320 PF00563 EAL domain D5R55_RS13325 PF02417 Chromate transporter D5R55_RS13335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS13335 PF03466 LysR substrate binding domain D5R55_RS13345 PF00521 DNA gyrase/topoisomerase IV, subunit A D5R55_RS13350 PF00986 DNA gyrase B subunit, carboxyl terminus D5R55_RS13350 PF01751 Toprim domain D5R55_RS13350 PF00204 DNA gyrase B D5R55_RS13350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS13355 PF00005 ABC transporter D5R55_RS13355 PF16326 ABC transporter C-terminal domain D5R55_RS13355 PF12848 ABC transporter D5R55_RS13370 PF00301 Rubredoxin D5R55_RS13390 PF12838 4Fe-4S dicluster domain D5R55_RS13420 PF00440 Bacterial regulatory proteins, tetR family D5R55_RS13425 PF03974 Ecotin D5R55_RS13445 PF07690 Major Facilitator Superfamily D5R55_RS13455 PF00982 Glycosyltransferase family 20 D5R55_RS13475 PF00005 ABC transporter D5R55_RS13480 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS13490 PF00672 HAMP domain D5R55_RS13490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS13490 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS13495 PF00072 Response regulator receiver domain D5R55_RS13495 PF00486 Transcriptional regulatory protein, C terminal D5R55_RS13505 PF17954 Quercetinase C-terminal cupin domain D5R55_RS13505 PF02678 Pirin D5R55_RS13510 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5R55_RS13515 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS13520 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS13525 PF00005 ABC transporter D5R55_RS13535 PF03466 LysR substrate binding domain D5R55_RS13535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS13540 PF13609 Gram-negative porin D5R55_RS13545 PF00543 Nitrogen regulatory protein P-II D5R55_RS13550 PF02540 NAD synthase D5R55_RS13550 PF00795 Carbon-nitrogen hydrolase D5R55_RS13560 PF01915 Glycosyl hydrolase family 3 C-terminal domain D5R55_RS13560 PF14310 Fibronectin type III-like domain D5R55_RS13560 PF00933 Glycosyl hydrolase family 3 N terminal domain D5R55_RS13570 PF01541 GIY-YIG catalytic domain D5R55_RS13575 PF00719 Inorganic pyrophosphatase D5R55_RS13580 PF00171 Aldehyde dehydrogenase family D5R55_RS13590 PF07690 Major Facilitator Superfamily D5R55_RS13610 PF02602 Uroporphyrinogen-III synthase HemD D5R55_RS13615 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain D5R55_RS13615 PF03900 Porphobilinogen deaminase, C-terminal domain D5R55_RS13620 PF00311 Phosphoenolpyruvate carboxylase D5R55_RS13625 PF08241 Methyltransferase domain D5R55_RS13655 PF14698 Argininosuccinate lyase C-terminal D5R55_RS13655 PF00206 Lyase D5R55_RS13660 PF13419 Haloacid dehalogenase-like hydrolase D5R55_RS13670 PF01276 Orn/Lys/Arg decarboxylase, major domain D5R55_RS13670 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain D5R55_RS13670 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain D5R55_RS13675 PF00692 dUTPase D5R55_RS13685 PF10609 NUBPL iron-transfer P-loop NTPase D5R55_RS13690 PF00691 OmpA family D5R55_RS13690 PF05736 OprF membrane domain D5R55_RS13705 PF01588 Putative tRNA binding domain D5R55_RS13705 PF09334 tRNA synthetases class I (M) D5R55_RS13710 PF04357 TamB, inner membrane protein subunit of TAM complex D5R55_RS13725 PF02616 Segregation and condensation protein ScpA D5R55_RS13730 PF02569 Pantoate-beta-alanine ligase D5R55_RS13735 PF02261 Aspartate decarboxylase D5R55_RS13745 PF07681 DoxX D5R55_RS13750 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D5R55_RS13750 PF07685 CobB/CobQ-like glutamine amidotransferase domain D5R55_RS13755 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase D5R55_RS13760 PF03186 CobD/Cbib protein D5R55_RS13760 PF17113 Regulatory signalling modulator protein AmpE D5R55_RS13765 PF00155 Aminotransferase class I and II D5R55_RS13770 PF01497 Periplasmic binding protein D5R55_RS13780 PF02654 Cobalamin-5-phosphate synthase D5R55_RS13785 PF02277 Phosphoribosyltransferase D5R55_RS13790 PF00005 ABC transporter D5R55_RS13795 PF01032 FecCD transport family D5R55_RS13805 PF05164 Cell division protein ZapA D5R55_RS13825 PF01790 Prolipoprotein diacylglyceryl transferase D5R55_RS13830 PF03466 LysR substrate binding domain D5R55_RS13830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS13835 PF00920 Dehydratase family D5R55_RS13840 PF00034 Cytochrome c D5R55_RS13850 PF04364 DNA polymerase III chi subunit, HolC D5R55_RS13855 PF02789 Cytosol aminopeptidase family, N-terminal domain D5R55_RS13855 PF00883 Cytosol aminopeptidase family, catalytic domain D5R55_RS13875 PF10414 Sirohaem synthase dimerisation region D5R55_RS13875 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D5R55_RS13875 PF14824 Sirohaem biosynthesis protein central D5R55_RS13880 PF00009 Elongation factor Tu GTP binding domain D5R55_RS13885 PF01507 Phosphoadenosine phosphosulfate reductase family D5R55_RS13890 PF01507 Phosphoadenosine phosphosulfate reductase family D5R55_RS13905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS13905 PF03466 LysR substrate binding domain D5R55_RS13935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS13935 PF03466 LysR substrate binding domain D5R55_RS13955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS13955 PF03466 LysR substrate binding domain D5R55_RS13960 PF03466 LysR substrate binding domain D5R55_RS13960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS13965 PF00106 short chain dehydrogenase D5R55_RS13980 PF01479 S4 domain D5R55_RS13980 PF00849 RNA pseudouridylate synthase D5R55_RS13995 PF00970 Oxidoreductase FAD-binding domain D5R55_RS13995 PF00175 Oxidoreductase NAD-binding domain D5R55_RS13995 PF00111 2Fe-2S iron-sulfur cluster binding domain D5R55_RS14000 PF00202 Aminotransferase class-III D5R55_RS14005 PF00583 Acetyltransferase (GNAT) family D5R55_RS14015 PF00005 ABC transporter D5R55_RS14020 PF12399 Branched-chain amino acid ATP-binding cassette transporter D5R55_RS14020 PF00005 ABC transporter D5R55_RS14025 PF02653 Branched-chain amino acid transport system / permease component D5R55_RS14025 PF11862 Domain of unknown function (DUF3382) D5R55_RS14030 PF02653 Branched-chain amino acid transport system / permease component D5R55_RS14040 PF02401 LytB protein D5R55_RS14045 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D5R55_RS14050 PF04002 RadC-like JAB domain D5R55_RS14055 PF00830 Ribosomal L28 family D5R55_RS14060 PF00471 Ribosomal protein L33 D5R55_RS14065 PF02910 Fumarate reductase flavoprotein C-term D5R55_RS14065 PF00890 FAD binding domain D5R55_RS14070 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain D5R55_RS14070 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain D5R55_RS14075 PF02445 Quinolinate synthetase A protein D5R55_RS14085 PF12794 Mechanosensitive ion channel inner membrane domain 1 D5R55_RS14085 PF12795 Mechanosensitive ion channel porin domain D5R55_RS14085 PF00924 Mechanosensitive ion channel D5R55_RS14090 PF01029 NusB family D5R55_RS14090 PF01189 16S rRNA methyltransferase RsmB/F D5R55_RS14095 PF00551 Formyl transferase D5R55_RS14100 PF01687 Riboflavin kinase D5R55_RS14100 PF06574 FAD synthetase D5R55_RS14105 PF08264 Anticodon-binding domain of tRNA D5R55_RS14105 PF06827 Zinc finger found in FPG and IleRS D5R55_RS14105 PF00133 tRNA synthetases class I (I, L, M and V) D5R55_RS14110 PF01252 Signal peptidase (SPase) II D5R55_RS14115 PF04127 DNA / pantothenate metabolism flavoprotein D5R55_RS14115 PF02441 Flavoprotein D5R55_RS14120 PF00692 dUTPase D5R55_RS14130 PF00324 Amino acid permease D5R55_RS14135 PF10431 C-terminal, D2-small domain, of ClpB protein D5R55_RS14135 PF07724 AAA domain (Cdc48 subfamily) D5R55_RS14135 PF00004 ATPase family associated with various cellular activities (AAA) D5R55_RS14135 PF02861 Clp amino terminal domain, pathogenicity island component D5R55_RS14135 PF17871 AAA lid domain D5R55_RS14140 PF02617 ATP-dependent Clp protease adaptor protein ClpS D5R55_RS14150 PF00313 'Cold-shock' DNA-binding domain D5R55_RS14155 PF07731 Multicopper oxidase D5R55_RS14155 PF07732 Multicopper oxidase D5R55_RS14165 PF03971 Monomeric isocitrate dehydrogenase D5R55_RS14170 PF00180 Isocitrate/isopropylmalate dehydrogenase D5R55_RS14175 PF00849 RNA pseudouridylate synthase D5R55_RS14190 PF00679 Elongation factor G C-terminus D5R55_RS14190 PF14492 Elongation Factor G, domain II D5R55_RS14190 PF03764 Elongation factor G, domain IV D5R55_RS14190 PF03144 Elongation factor Tu domain 2 D5R55_RS14190 PF00009 Elongation factor Tu GTP binding domain D5R55_RS14195 PF03824 High-affinity nickel-transport protein D5R55_RS14210 PF00248 Aldo/keto reductase family D5R55_RS14215 PF07702 UTRA domain D5R55_RS14215 PF00392 Bacterial regulatory proteins, gntR family D5R55_RS14220 PF02515 CoA-transferase family III D5R55_RS14240 PF07690 Major Facilitator Superfamily D5R55_RS14255 PF02558 Ketopantoate reductase PanE/ApbA D5R55_RS14255 PF08546 Ketopantoate reductase PanE/ApbA C terminal D5R55_RS14275 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D5R55_RS14275 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D5R55_RS14280 PF13742 OB-fold nucleic acid binding domain D5R55_RS14280 PF02601 Exonuclease VII, large subunit D5R55_RS14290 PF02606 Tetraacyldisaccharide-1-P 4'-kinase D5R55_RS14295 PF03966 Trm112p-like protein D5R55_RS14300 PF02348 Cytidylyltransferase D5R55_RS14305 PF05191 Adenylate kinase, active site lid D5R55_RS14310 PF13369 Transglutaminase-like superfamily D5R55_RS14315 PF03023 Lipid II flippase MurJ D5R55_RS14320 PF01649 Ribosomal protein S20 D5R55_RS14330 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D5R55_RS14330 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D5R55_RS14335 PF01565 FAD binding domain D5R55_RS14335 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain D5R55_RS14340 PF04461 Protein of unknown function (DUF520) D5R55_RS14345 PF02660 Glycerol-3-phosphate acyltransferase D5R55_RS14350 PF04073 Aminoacyl-tRNA editing domain D5R55_RS14355 PF13193 AMP-binding enzyme C-terminal domain D5R55_RS14355 PF00501 AMP-binding enzyme D5R55_RS14360 PF00589 Phage integrase family D5R55_RS14360 PF02899 Phage integrase, N-terminal SAM-like domain D5R55_RS14370 PF08331 Domain of unknown function (DUF1730) D5R55_RS14375 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE D5R55_RS14380 PF01520 N-acetylmuramoyl-L-alanine amidase D5R55_RS14380 PF11741 AMIN domain D5R55_RS14385 PF00892 EamA-like transporter family D5R55_RS14395 PF02678 Pirin D5R55_RS14395 PF05726 Pirin C-terminal cupin domain D5R55_RS14400 PF00085 Thioredoxin D5R55_RS14405 PF00899 ThiF family D5R55_RS14410 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region D5R55_RS14410 PF01243 Pyridoxamine 5'-phosphate oxidase D5R55_RS14425 PF01625 Peptide methionine sulfoxide reductase D5R55_RS14445 PF01613 Flavin reductase like domain D5R55_RS14450 PF01037 Lrp/AsnC ligand binding domain D5R55_RS14455 PF04199 Putative cyclase D5R55_RS14460 PF00266 Aminotransferase class-V D5R55_RS14465 PF03301 Tryptophan 2,3-dioxygenase D5R55_RS14470 PF01232 Mannitol dehydrogenase Rossmann domain D5R55_RS14470 PF08125 Mannitol dehydrogenase C-terminal domain D5R55_RS14475 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D5R55_RS14475 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D5R55_RS14480 PF04198 Putative sugar-binding domain D5R55_RS14480 PF00325 Bacterial regulatory proteins, crp family D5R55_RS14485 PF07690 Major Facilitator Superfamily D5R55_RS14490 PF00144 Beta-lactamase D5R55_RS14495 PF03466 LysR substrate binding domain D5R55_RS14495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS14500 PF00005 ABC transporter D5R55_RS14500 PF17912 MalK OB fold domain D5R55_RS14510 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS14515 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS14525 PF08013 Tagatose 6 phosphate kinase D5R55_RS14530 PF00294 pfkB family carbohydrate kinase D5R55_RS14540 PF01475 Ferric uptake regulator family D5R55_RS14550 PF00005 ABC transporter D5R55_RS14555 PF00950 ABC 3 transport family D5R55_RS14560 PF00756 Putative esterase D5R55_RS14565 PF08240 Alcohol dehydrogenase GroES-like domain D5R55_RS14565 PF00107 Zinc-binding dehydrogenase D5R55_RS14570 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D5R55_RS14570 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D5R55_RS14575 PF00860 Permease family D5R55_RS14580 PF02321 Outer membrane efflux protein D5R55_RS14585 PF00873 AcrB/AcrD/AcrF family D5R55_RS14590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D5R55_RS14590 PF00529 HlyD membrane-fusion protein of T1SS D5R55_RS14595 PF00440 Bacterial regulatory proteins, tetR family D5R55_RS14595 PF08361 MAATS-type transcriptional repressor, C-terminal region D5R55_RS14605 PF01965 DJ-1/PfpI family D5R55_RS14605 PF12833 Helix-turn-helix domain D5R55_RS14625 PF13180 PDZ domain D5R55_RS14630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS14630 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS14635 PF00486 Transcriptional regulatory protein, C terminal D5R55_RS14635 PF00072 Response regulator receiver domain D5R55_RS14640 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family D5R55_RS14645 PF04116 Fatty acid hydroxylase superfamily D5R55_RS14655 PF03481 Putative GTP-binding controlling metal-binding D5R55_RS14655 PF01300 Telomere recombination D5R55_RS14660 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain D5R55_RS14660 PF02222 ATP-grasp domain D5R55_RS14665 PF00731 AIR carboxylase D5R55_RS14670 PF01259 SAICAR synthetase D5R55_RS14675 PF01116 Fructose-bisphosphate aldolase class-II D5R55_RS14680 PF02887 Pyruvate kinase, alpha/beta domain D5R55_RS14680 PF00224 Pyruvate kinase, barrel domain D5R55_RS14685 PF00162 Phosphoglycerate kinase D5R55_RS14700 PF01063 Amino-transferase class IV D5R55_RS14710 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D5R55_RS14720 PF00561 alpha/beta hydrolase fold D5R55_RS14730 PF01435 Peptidase family M48 D5R55_RS14730 PF13181 Tetratricopeptide repeat D5R55_RS14735 PF01967 MoaC family D5R55_RS14755 PF07963 Prokaryotic N-terminal methylation motif D5R55_RS14755 PF00114 Pilin (bacterial filament) D5R55_RS14760 PF03741 Integral membrane protein TerC family D5R55_RS14765 PF02629 CoA binding domain D5R55_RS14765 PF00549 CoA-ligase D5R55_RS14770 PF00549 CoA-ligase D5R55_RS14770 PF08442 ATP-grasp domain D5R55_RS14780 PF02631 RecX family D5R55_RS14785 PF00154 recA bacterial DNA recombination protein D5R55_RS14790 PF00486 Transcriptional regulatory protein, C terminal D5R55_RS14790 PF00072 Response regulator receiver domain D5R55_RS14795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS14795 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS14800 PF08946 Osmosensory transporter coiled coil D5R55_RS14800 PF00083 Sugar (and other) transporter D5R55_RS14810 PF03466 LysR substrate binding domain D5R55_RS14810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS14815 PF12833 Helix-turn-helix domain D5R55_RS14815 PF01965 DJ-1/PfpI family D5R55_RS14820 PF01965 DJ-1/PfpI family D5R55_RS14835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS14835 PF03466 LysR substrate binding domain D5R55_RS14850 PF06906 Protein of unknown function (DUF1272) D5R55_RS14855 PF07729 FCD domain D5R55_RS14855 PF00392 Bacterial regulatory proteins, gntR family D5R55_RS14860 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D5R55_RS14860 PF13378 Enolase C-terminal domain-like D5R55_RS14865 PF05425 Copper resistance protein D D5R55_RS14870 PF00034 Cytochrome c D5R55_RS14875 PF00034 Cytochrome c D5R55_RS14875 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D5R55_RS14880 PF00270 DEAD/DEAH box helicase D5R55_RS14880 PF00271 Helicase conserved C-terminal domain D5R55_RS14905 PF08220 DeoR-like helix-turn-helix domain D5R55_RS14905 PF00455 DeoR C terminal sensor domain D5R55_RS14920 PF16901 C-terminal domain of alpha-glycerophosphate oxidase D5R55_RS14920 PF01266 FAD dependent oxidoreductase D5R55_RS14925 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D5R55_RS14925 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D5R55_RS14930 PF00230 Major intrinsic protein D5R55_RS14935 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5R55_RS14935 PF14759 Reductase C-terminal D5R55_RS14940 PF00355 Rieske [2Fe-2S] domain D5R55_RS14950 PF00356 Bacterial regulatory proteins, lacI family D5R55_RS14965 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D5R55_RS14965 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D5R55_RS14970 PF13419 Haloacid dehalogenase-like hydrolase D5R55_RS14975 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D5R55_RS14980 PF07883 Cupin domain D5R55_RS14980 PF01381 Helix-turn-helix D5R55_RS14985 PF07690 Major Facilitator Superfamily D5R55_RS14990 PF03466 LysR substrate binding domain D5R55_RS14990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS14995 PF01938 TRAM domain D5R55_RS14995 PF00919 Uncharacterized protein family UPF0004 D5R55_RS14995 PF04055 Radical SAM superfamily D5R55_RS15000 PF02562 PhoH-like protein D5R55_RS15005 PF02130 Uncharacterized protein family UPF0054 D5R55_RS15010 PF04752 ChaC-like protein D5R55_RS15015 PF03471 Transporter associated domain D5R55_RS15015 PF00571 CBS domain D5R55_RS15020 PF00795 Carbon-nitrogen hydrolase D5R55_RS15030 PF02091 Glycyl-tRNA synthetase alpha subunit D5R55_RS15035 PF05746 DALR anticodon binding domain D5R55_RS15035 PF02092 Glycyl-tRNA synthetase beta subunit D5R55_RS15045 PF01553 Acyltransferase D5R55_RS15055 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D5R55_RS15065 PF00398 Ribosomal RNA adenine dimethylase D5R55_RS15070 PF04166 Pyridoxal phosphate biosynthetic protein PdxA D5R55_RS15075 PF09312 SurA N-terminal domain D5R55_RS15080 PF04453 LPS transport system D D5R55_RS15085 PF01636 Phosphotransferase enzyme family D5R55_RS15090 PF00483 Nucleotidyl transferase D5R55_RS15095 PF00005 ABC transporter D5R55_RS15095 PF00664 ABC transporter transmembrane region D5R55_RS15105 PF03061 Thioesterase superfamily D5R55_RS15115 PF02634 FdhD/NarQ family D5R55_RS15120 PF00378 Enoyl-CoA hydratase/isomerase D5R55_RS15125 PF02803 Thiolase, C-terminal domain D5R55_RS15125 PF00108 Thiolase, N-terminal domain D5R55_RS15130 PF00378 Enoyl-CoA hydratase/isomerase D5R55_RS15130 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D5R55_RS15130 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D5R55_RS15135 PF02770 Acyl-CoA dehydrogenase, middle domain D5R55_RS15135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D5R55_RS15135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D5R55_RS15135 PF12806 Acetyl-CoA dehydrogenase C-terminal like D5R55_RS15145 PF13091 PLD-like domain D5R55_RS15150 PF00293 NUDIX domain D5R55_RS15155 PF00152 tRNA synthetases class II (D, K and N) D5R55_RS15155 PF01336 OB-fold nucleic acid binding domain D5R55_RS15155 PF02938 GAD domain D5R55_RS15170 PF05724 Thiopurine S-methyltransferase (TPMT) D5R55_RS15175 PF03109 ABC1 family D5R55_RS15190 PF01209 ubiE/COQ5 methyltransferase family D5R55_RS15215 PF00585 C-terminal regulatory domain of Threonine dehydratase D5R55_RS15215 PF00291 Pyridoxal-phosphate dependent enzyme D5R55_RS15220 PF14489 QueF-like protein D5R55_RS15220 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term D5R55_RS15225 PF01042 Endoribonuclease L-PSP D5R55_RS15230 PF07969 Amidohydrolase family D5R55_RS15235 PF01418 Helix-turn-helix domain, rpiR family D5R55_RS15235 PF01380 SIS domain D5R55_RS15235 PF02685 Glucokinase D5R55_RS15255 PF07690 Major Facilitator Superfamily D5R55_RS15265 PF07859 alpha/beta hydrolase fold D5R55_RS15275 PF00596 Class II Aldolase and Adducin N-terminal domain D5R55_RS15280 PF13091 PLD-like domain D5R55_RS15290 PF01435 Peptidase family M48 D5R55_RS15325 PF07977 FabA-like domain D5R55_RS15345 PF01522 Polysaccharide deacetylase D5R55_RS15350 PF02801 Beta-ketoacyl synthase, C-terminal domain D5R55_RS15350 PF00109 Beta-ketoacyl synthase, N-terminal domain D5R55_RS15375 PF00106 short chain dehydrogenase D5R55_RS15380 PF00108 Thiolase, N-terminal domain D5R55_RS15380 PF02803 Thiolase, C-terminal domain D5R55_RS15395 PF02245 Methylpurine-DNA glycosylase (MPG) D5R55_RS15400 PF03167 Uracil DNA glycosylase superfamily D5R55_RS15405 PF00436 Single-strand binding protein family D5R55_RS15410 PF07690 Major Facilitator Superfamily D5R55_RS15420 PF17755 UvrA DNA-binding domain D5R55_RS15420 PF17760 UvrA interaction domain D5R55_RS15430 PF00551 Formyl transferase D5R55_RS15440 PF01810 LysE type translocator D5R55_RS15445 PF00156 Phosphoribosyl transferase domain D5R55_RS15450 PF02254 TrkA-N domain D5R55_RS15450 PF02080 TrkA-C domain D5R55_RS15450 PF00999 Sodium/hydrogen exchanger family D5R55_RS15455 PF00571 CBS domain D5R55_RS15455 PF01380 SIS domain D5R55_RS15475 PF12399 Branched-chain amino acid ATP-binding cassette transporter D5R55_RS15475 PF00005 ABC transporter D5R55_RS15480 PF04552 Sigma-54, DNA binding domain D5R55_RS15480 PF04963 Sigma-54 factor, core binding domain D5R55_RS15480 PF00309 Sigma-54 factor, Activator interacting domain (AID) D5R55_RS15485 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D5R55_RS15490 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D5R55_RS15495 PF07475 HPr Serine kinase C-terminal domain D5R55_RS15495 PF02603 HPr Serine kinase N terminus D5R55_RS15500 PF03668 P-loop ATPase protein family D5R55_RS15510 PF10576 Iron-sulfur binding domain of endonuclease III D5R55_RS15510 PF00633 Helix-hairpin-helix motif D5R55_RS15510 PF00730 HhH-GPD superfamily base excision DNA repair protein D5R55_RS15510 PF14815 NUDIX domain D5R55_RS15515 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain D5R55_RS15515 PF06827 Zinc finger found in FPG and IleRS D5R55_RS15515 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain D5R55_RS15530 PF03550 Outer membrane lipoprotein LolB D5R55_RS15535 PF08544 GHMP kinases C terminal D5R55_RS15535 PF00288 GHMP kinases N terminal domain D5R55_RS15545 PF14572 Phosphoribosyl synthetase-associated domain D5R55_RS15545 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase D5R55_RS15550 PF01386 Ribosomal L25p family D5R55_RS15550 PF14693 Ribosomal protein TL5, C-terminal domain D5R55_RS15555 PF01195 Peptidyl-tRNA hydrolase D5R55_RS15560 PF00155 Aminotransferase class I and II D5R55_RS15565 PF00037 4Fe-4S binding domain D5R55_RS15570 PF01467 Cytidylyltransferase-like D5R55_RS15580 PF02881 SRP54-type protein, helical bundle domain D5R55_RS15580 PF00448 SRP54-type protein, GTPase domain D5R55_RS15585 PF02798 Glutathione S-transferase, N-terminal domain D5R55_RS15585 PF14497 Glutathione S-transferase, C-terminal domain D5R55_RS15590 PF02885 Glycosyl transferase family, helical bundle domain D5R55_RS15595 PF00682 HMGL-like D5R55_RS15595 PF08502 LeuA allosteric (dimerisation) domain D5R55_RS15605 PF09411 Lipid A 3-O-deacylase (PagL) D5R55_RS15615 PF00140 Sigma-70 factor, region 1.2 D5R55_RS15615 PF04545 Sigma-70, region 4 D5R55_RS15615 PF04542 Sigma-70 region 2 D5R55_RS15625 PF01654 Cytochrome bd terminal oxidase subunit I D5R55_RS15630 PF02322 Cytochrome bd terminal oxidase subunit II D5R55_RS15645 PF02838 Glycosyl hydrolase family 20, domain 2 D5R55_RS15645 PF00728 Glycosyl hydrolase family 20, catalytic domain D5R55_RS15645 PF03173 Putative carbohydrate binding domain D5R55_RS15645 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain D5R55_RS15650 PF02378 Phosphotransferase system, EIIC D5R55_RS15650 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D5R55_RS15650 PF00367 phosphotransferase system, EIIB D5R55_RS15655 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D5R55_RS15655 PF00391 PEP-utilising enzyme, mobile domain D5R55_RS15655 PF02896 PEP-utilising enzyme, TIM barrel domain D5R55_RS15655 PF00381 PTS HPr component phosphorylation site D5R55_RS15655 PF05524 PEP-utilising enzyme, N-terminal D5R55_RS15660 PF01380 SIS domain D5R55_RS15665 PF01979 Amidohydrolase family D5R55_RS15670 PF00392 Bacterial regulatory proteins, gntR family D5R55_RS15670 PF07702 UTRA domain D5R55_RS15675 PF07733 Bacterial DNA polymerase III alpha NTPase domain D5R55_RS15675 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D5R55_RS15675 PF14579 Helix-hairpin-helix motif D5R55_RS15675 PF02811 PHP domain D5R55_RS15700 PF03180 NLPA lipoprotein D5R55_RS15705 PF02203 Tar ligand binding domain homologue D5R55_RS15705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5R55_RS15705 PF00672 HAMP domain D5R55_RS15715 PF02630 SCO1/SenC D5R55_RS15720 PF01040 UbiA prenyltransferase family D5R55_RS15725 PF02628 Cytochrome oxidase assembly protein D5R55_RS15745 PF00510 Cytochrome c oxidase subunit III D5R55_RS15755 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 D5R55_RS15760 PF00115 Cytochrome C and Quinol oxidase polypeptide I D5R55_RS15765 PF02790 Cytochrome C oxidase subunit II, transmembrane domain D5R55_RS15765 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D5R55_RS15775 PF08241 Methyltransferase domain D5R55_RS15780 PF00156 Phosphoribosyl transferase domain D5R55_RS15785 PF00588 SpoU rRNA Methylase family D5R55_RS15790 PF01661 Macro domain D5R55_RS15795 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus D5R55_RS15795 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus D5R55_RS15800 PF02556 Preprotein translocase subunit SecB D5R55_RS15805 PF00462 Glutaredoxin D5R55_RS15810 PF00581 Rhodanese-like domain D5R55_RS15815 PF00300 Histidine phosphatase superfamily (branch 1) D5R55_RS15820 PF03572 Peptidase family S41 D5R55_RS15820 PF13180 PDZ domain D5R55_RS15825 PF00899 ThiF family D5R55_RS15830 PF05524 PEP-utilising enzyme, N-terminal D5R55_RS15830 PF00391 PEP-utilising enzyme, mobile domain D5R55_RS15830 PF02896 PEP-utilising enzyme, TIM barrel domain D5R55_RS15835 PF00381 PTS HPr component phosphorylation site D5R55_RS15845 PF02951 Prokaryotic glutathione synthetase, N-terminal domain D5R55_RS15845 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain D5R55_RS15855 PF00909 Ammonium Transporter Family D5R55_RS15860 PF00543 Nitrogen regulatory protein P-II D5R55_RS15865 PF04380 Membrane fusogenic activity D5R55_RS15870 PF13335 Magnesium chelatase, subunit ChlI C-terminal D5R55_RS15870 PF01078 Magnesium chelatase, subunit ChlI D5R55_RS15885 PF00578 AhpC/TSA family D5R55_RS15890 PF00158 Sigma-54 interaction domain D5R55_RS15890 PF02954 Bacterial regulatory protein, Fis family D5R55_RS15890 PF00072 Response regulator receiver domain D5R55_RS15895 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS15895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS15895 PF02743 Cache domain D5R55_RS15900 PF00375 Sodium:dicarboxylate symporter family D5R55_RS15905 PF00474 Sodium:solute symporter family D5R55_RS15920 PF02515 CoA-transferase family III D5R55_RS15925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D5R55_RS15925 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D5R55_RS15925 PF02770 Acyl-CoA dehydrogenase, middle domain D5R55_RS15930 PF02770 Acyl-CoA dehydrogenase, middle domain D5R55_RS15930 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D5R55_RS15930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D5R55_RS15935 PF00378 Enoyl-CoA hydratase/isomerase D5R55_RS15935 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D5R55_RS15935 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D5R55_RS15940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS15940 PF03466 LysR substrate binding domain D5R55_RS15950 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS15955 PF00005 ABC transporter D5R55_RS15960 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D5R55_RS15965 PF04055 Radical SAM superfamily D5R55_RS15965 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family D5R55_RS15970 PF03099 Biotin/lipoate A/B protein ligase family D5R55_RS15980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS15980 PF03466 LysR substrate binding domain D5R55_RS15985 PF04359 Protein of unknown function (DUF493) D5R55_RS15990 PF01063 Amino-transferase class IV D5R55_RS15995 PF07943 Penicillin-binding protein 5, C-terminal domain D5R55_RS15995 PF00768 D-alanyl-D-alanine carboxypeptidase D5R55_RS16025 PF00005 ABC transporter D5R55_RS16030 PF02405 Permease MlaE D5R55_RS16035 PF00149 Calcineurin-like phosphoesterase D5R55_RS16035 PF02872 5'-nucleotidase, C-terminal domain D5R55_RS16050 PF02237 Biotin protein ligase C terminal domain D5R55_RS16050 PF08279 HTH domain D5R55_RS16050 PF03099 Biotin/lipoate A/B protein ligase family D5R55_RS16055 PF03309 Type III pantothenate kinase D5R55_RS16065 PF01467 Cytidylyltransferase-like D5R55_RS16090 PF00378 Enoyl-CoA hydratase/isomerase D5R55_RS16115 PF12091 Protein of unknown function (DUF3567) D5R55_RS16120 PF02574 Homocysteine S-methyltransferase D5R55_RS16120 PF00809 Pterin binding enzyme D5R55_RS16120 PF02965 Vitamin B12 dependent methionine synthase, activation domain D5R55_RS16120 PF02607 B12 binding domain D5R55_RS16120 PF02310 B12 binding domain D5R55_RS16125 PF02965 Vitamin B12 dependent methionine synthase, activation domain D5R55_RS16125 PF02310 B12 binding domain D5R55_RS16125 PF00809 Pterin binding enzyme D5R55_RS16125 PF02574 Homocysteine S-methyltransferase D5R55_RS16125 PF02607 B12 binding domain D5R55_RS16135 PF03485 Arginyl tRNA synthetase N terminal domain D5R55_RS16135 PF05746 DALR anticodon binding domain D5R55_RS16135 PF00750 tRNA synthetases class I (R) D5R55_RS16145 PF13462 Thioredoxin D5R55_RS16150 PF00106 short chain dehydrogenase D5R55_RS16155 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D5R55_RS16160 PF00005 ABC transporter D5R55_RS16160 PF16326 ABC transporter C-terminal domain D5R55_RS16160 PF12848 ABC transporter D5R55_RS16185 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) D5R55_RS16190 PF00484 Carbonic anhydrase D5R55_RS16195 PF00106 short chain dehydrogenase D5R55_RS16210 PF00202 Aminotransferase class-III D5R55_RS16215 PF00155 Aminotransferase class I and II D5R55_RS16225 PF06968 Biotin and Thiamin Synthesis associated domain D5R55_RS16225 PF04055 Radical SAM superfamily D5R55_RS16230 PF03932 CutC family D5R55_RS16245 PF05231 MASE1 D5R55_RS16245 PF00563 EAL domain D5R55_RS16250 PF00999 Sodium/hydrogen exchanger family D5R55_RS16265 PF12464 Maltose acetyltransferase D5R55_RS16265 PF14602 Hexapeptide repeat of succinyl-transferase D5R55_RS16270 PF02798 Glutathione S-transferase, N-terminal domain D5R55_RS16270 PF00043 Glutathione S-transferase, C-terminal domain D5R55_RS16275 PF07885 Ion channel D5R55_RS16275 PF17655 Inward rectifier potassium channel C-terminal domain D5R55_RS16290 PF00701 Dihydrodipicolinate synthetase family D5R55_RS16305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS16305 PF03466 LysR substrate binding domain D5R55_RS16315 PF02798 Glutathione S-transferase, N-terminal domain D5R55_RS16315 PF00043 Glutathione S-transferase, C-terminal domain D5R55_RS16320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS16320 PF03466 LysR substrate binding domain D5R55_RS16325 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D5R55_RS16325 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain D5R55_RS16330 PF03450 CO dehydrogenase flavoprotein C-terminal domain D5R55_RS16330 PF00941 FAD binding domain in molybdopterin dehydrogenase D5R55_RS16335 PF01799 [2Fe-2S] binding domain D5R55_RS16335 PF10518 TAT (twin-arginine translocation) pathway signal sequence D5R55_RS16335 PF00111 2Fe-2S iron-sulfur cluster binding domain D5R55_RS16355 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D5R55_RS16360 PF00682 HMGL-like D5R55_RS16380 PF01037 Lrp/AsnC ligand binding domain D5R55_RS16385 PF00561 alpha/beta hydrolase fold D5R55_RS16395 PF03466 LysR substrate binding domain D5R55_RS16395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS16410 PF13593 SBF-like CPA transporter family (DUF4137) D5R55_RS16430 PF00356 Bacterial regulatory proteins, lacI family D5R55_RS16440 PF00294 pfkB family carbohydrate kinase D5R55_RS16470 PF01171 PP-loop family D5R55_RS16475 PF12804 MobA-like NTP transferase domain D5R55_RS16475 PF00132 Bacterial transferase hexapeptide (six repeats) D5R55_RS16480 PF01380 SIS domain D5R55_RS16505 PF03239 Iron permease FTR1 family D5R55_RS16525 PF00171 Aldehyde dehydrogenase family D5R55_RS16540 PF07722 Peptidase C26 D5R55_RS16545 PF00120 Glutamine synthetase, catalytic domain D5R55_RS16550 PF00202 Aminotransferase class-III D5R55_RS16555 PF13416 Bacterial extracellular solute-binding protein D5R55_RS16560 PF00005 ABC transporter D5R55_RS16560 PF08402 TOBE domain D5R55_RS16565 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS16570 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS16580 PF01266 FAD dependent oxidoreductase D5R55_RS16585 PF01266 FAD dependent oxidoreductase D5R55_RS16590 PF05643 Putative bacterial lipoprotein (DUF799) D5R55_RS16600 PF03783 Curli production assembly/transport component CsgG D5R55_RS16605 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D5R55_RS16605 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5R55_RS16620 PF13609 Gram-negative porin D5R55_RS16640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS16640 PF03466 LysR substrate binding domain D5R55_RS16645 PF00860 Permease family D5R55_RS16650 PF00669 Bacterial flagellin N-terminal helical region D5R55_RS16655 PF00460 Flagella basal body rod protein D5R55_RS16655 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D5R55_RS16660 PF07238 PilZ domain D5R55_RS16660 PF07317 Flagellar regulator YcgR D5R55_RS16670 PF10135 Rod binding protein D5R55_RS16670 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase D5R55_RS16675 PF02119 Flagellar P-ring protein D5R55_RS16680 PF02107 Flagellar L-ring protein D5R55_RS16685 PF00460 Flagella basal body rod protein D5R55_RS16685 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D5R55_RS16690 PF00460 Flagella basal body rod protein D5R55_RS16690 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D5R55_RS16695 PF00460 Flagella basal body rod protein D5R55_RS16695 PF07559 Flagellar basal body protein FlaE D5R55_RS16695 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D5R55_RS16700 PF13861 FlgD Tudor-like domain D5R55_RS16700 PF13860 FlgD Ig-like domain D5R55_RS16700 PF03963 Flagellar hook capping protein - N-terminal region D5R55_RS16705 PF00460 Flagella basal body rod protein D5R55_RS16705 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D5R55_RS16710 PF00460 Flagella basal body rod protein D5R55_RS16730 PF00557 Metallopeptidase family M24 D5R55_RS16730 PF01321 Creatinase/Prolidase N-terminal domain D5R55_RS16740 PF01966 HD domain D5R55_RS16740 PF12627 Probable RNA and SrmB- binding site of polymerase A D5R55_RS16740 PF01743 Poly A polymerase head domain D5R55_RS16755 PF14718 Soluble lytic murein transglycosylase L domain D5R55_RS16755 PF01464 Transglycosylase SLT domain D5R55_RS16760 PF01812 5-formyltetrahydrofolate cyclo-ligase family D5R55_RS16770 PF02682 Carboxyltransferase domain, subdomain C and D D5R55_RS16775 PF02626 Carboxyltransferase domain, subdomain A and B D5R55_RS16780 PF03746 LamB/YcsF family D5R55_RS16790 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D5R55_RS16790 PF00005 ABC transporter D5R55_RS16795 PF00005 ABC transporter D5R55_RS16795 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D5R55_RS16800 PF12911 N-terminal TM domain of oligopeptide transport permease C D5R55_RS16800 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS16805 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS16810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D5R55_RS16815 PF07690 Major Facilitator Superfamily D5R55_RS16820 PF01355 High potential iron-sulfur protein D5R55_RS16825 PF01266 FAD dependent oxidoreductase D5R55_RS16830 PF00004 ATPase family associated with various cellular activities (AAA) D5R55_RS16830 PF05362 Lon protease (S16) C-terminal proteolytic domain D5R55_RS16830 PF02190 ATP-dependent protease La (LON) substrate-binding domain D5R55_RS16835 PF00881 Nitroreductase family D5R55_RS16845 PF03372 Endonuclease/Exonuclease/phosphatase family D5R55_RS16850 PF00970 Oxidoreductase FAD-binding domain D5R55_RS16850 PF00175 Oxidoreductase NAD-binding domain D5R55_RS16855 PF07730 Histidine kinase D5R55_RS16855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS16855 PF05231 MASE1 D5R55_RS16860 PF00196 Bacterial regulatory proteins, luxR family D5R55_RS16860 PF00072 Response regulator receiver domain D5R55_RS16865 PF13520 Amino acid permease D5R55_RS16880 PF01312 FlhB HrpN YscU SpaS Family D5R55_RS16895 PF02561 Flagellar protein FliS D5R55_RS16900 PF02049 Flagellar hook-basal body complex protein FliE D5R55_RS16910 PF08345 Flagellar M-ring protein C-terminal D5R55_RS16910 PF01514 Secretory protein of YscJ/FliF family D5R55_RS16915 PF14841 FliG middle domain D5R55_RS16915 PF14842 FliG N-terminal domain D5R55_RS16915 PF01706 FliG C-terminal domain D5R55_RS16925 PF18269 T3SS EscN ATPase C-terminal domain D5R55_RS16925 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D5R55_RS16940 PF00732 GMC oxidoreductase D5R55_RS16940 PF05199 GMC oxidoreductase D5R55_RS16950 PF00171 Aldehyde dehydrogenase family D5R55_RS16955 PF01636 Phosphotransferase enzyme family D5R55_RS16985 PF00248 Aldo/keto reductase family D5R55_RS17005 PF02772 S-adenosylmethionine synthetase, central domain D5R55_RS17005 PF00438 S-adenosylmethionine synthetase, N-terminal domain D5R55_RS17005 PF02773 S-adenosylmethionine synthetase, C-terminal domain D5R55_RS17010 PF03279 Bacterial lipid A biosynthesis acyltransferase D5R55_RS17015 PF01381 Helix-turn-helix D5R55_RS17025 PF01678 Diaminopimelate epimerase D5R55_RS17035 PF00589 Phage integrase family D5R55_RS17035 PF02899 Phage integrase, N-terminal SAM-like domain D5R55_RS17040 PF10672 S-adenosylmethionine-dependent methyltransferase D5R55_RS17040 PF17785 PUA-like domain D5R55_RS17045 PF07683 Cobalamin synthesis protein cobW C-terminal domain D5R55_RS17045 PF02492 CobW/HypB/UreG, nucleotide-binding domain D5R55_RS17055 PF01258 Prokaryotic dksA/traR C4-type zinc finger D5R55_RS17060 PF00227 Proteasome subunit D5R55_RS17065 PF07724 AAA domain (Cdc48 subfamily) D5R55_RS17065 PF00004 ATPase family associated with various cellular activities (AAA) D5R55_RS17070 PF00072 Response regulator receiver domain D5R55_RS17070 PF02954 Bacterial regulatory protein, Fis family D5R55_RS17090 PF00696 Amino acid kinase family D5R55_RS17100 PF00440 Bacterial regulatory proteins, tetR family D5R55_RS17115 PF00529 HlyD membrane-fusion protein of T1SS D5R55_RS17115 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D5R55_RS17120 PF03412 Peptidase C39 family D5R55_RS17120 PF00005 ABC transporter D5R55_RS17120 PF00664 ABC transporter transmembrane region D5R55_RS17140 PF00691 OmpA family D5R55_RS17145 PF13018 Extended Signal Peptide of Type V secretion system D5R55_RS17145 PF05658 Head domain of trimeric autotransporter adhesin D5R55_RS17145 PF03895 YadA-like membrane anchor domain D5R55_RS17145 PF05658 Head domain of trimeric autotransporter adhesin D5R55_RS17145 PF05662 Coiled stalk of trimeric autotransporter adhesin D5R55_RS17145 PF05662 Coiled stalk of trimeric autotransporter adhesin D5R55_RS17145 PF03895 YadA-like membrane anchor domain D5R55_RS17145 PF13018 Extended Signal Peptide of Type V secretion system D5R55_RS17155 PF00561 alpha/beta hydrolase fold D5R55_RS17160 PF00561 alpha/beta hydrolase fold D5R55_RS17160 PF07021 Methionine biosynthesis protein MetW D5R55_RS17165 PF07690 Major Facilitator Superfamily D5R55_RS17175 PF12833 Helix-turn-helix domain D5R55_RS17175 PF06719 AraC-type transcriptional regulator N-terminus D5R55_RS17180 PF08240 Alcohol dehydrogenase GroES-like domain D5R55_RS17180 PF00107 Zinc-binding dehydrogenase D5R55_RS17185 PF03372 Endonuclease/Exonuclease/phosphatase family D5R55_RS17190 PF03976 Polyphosphate kinase 2 (PPK2) D5R55_RS17195 PF02934 GatB/GatE catalytic domain D5R55_RS17195 PF02637 GatB domain D5R55_RS17200 PF01425 Amidase D5R55_RS17205 PF02686 Glu-tRNAGln amidotransferase C subunit D5R55_RS17225 PF00905 Penicillin binding protein transpeptidase domain D5R55_RS17225 PF03717 Penicillin-binding Protein dimerisation domain D5R55_RS17230 PF01098 Cell cycle protein D5R55_RS17240 PF03328 HpcH/HpaI aldolase/citrate lyase family D5R55_RS17245 PF01242 6-pyruvoyl tetrahydropterin synthase D5R55_RS17255 PF06508 Queuosine biosynthesis protein QueC D5R55_RS17265 PF02954 Bacterial regulatory protein, Fis family D5R55_RS17265 PF00072 Response regulator receiver domain D5R55_RS17265 PF00158 Sigma-54 interaction domain D5R55_RS17270 PF00672 HAMP domain D5R55_RS17270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS17270 PF00989 PAS fold D5R55_RS17270 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS17280 PF01189 16S rRNA methyltransferase RsmB/F D5R55_RS17280 PF01029 NusB family D5R55_RS17285 PF01435 Peptidase family M48 D5R55_RS17290 PF01810 LysE type translocator D5R55_RS17295 PF02911 Formyl transferase, C-terminal domain D5R55_RS17295 PF00551 Formyl transferase D5R55_RS17300 PF01327 Polypeptide deformylase D5R55_RS17305 PF17782 DprA winged helix domain D5R55_RS17305 PF02481 DNA recombination-mediator protein A D5R55_RS17315 PF01131 DNA topoisomerase D5R55_RS17315 PF01751 Toprim domain D5R55_RS17320 PF03466 LysR substrate binding domain D5R55_RS17320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS17325 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D5R55_RS17325 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D5R55_RS17355 PF00561 alpha/beta hydrolase fold D5R55_RS17360 PF00005 ABC transporter D5R55_RS17365 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS17370 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5R55_RS17375 PF00171 Aldehyde dehydrogenase family D5R55_RS17380 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase D5R55_RS17385 PF00266 Aminotransferase class-V D5R55_RS17390 PF01266 FAD dependent oxidoreductase D5R55_RS17405 PF00392 Bacterial regulatory proteins, gntR family D5R55_RS17405 PF07729 FCD domain D5R55_RS17410 PF04185 Phosphoesterase family D5R55_RS17410 PF05506 Domain of unknown function (DUF756) D5R55_RS17415 PF03466 LysR substrate binding domain D5R55_RS17415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS17420 PF02652 L-lactate permease D5R55_RS17435 PF04262 Glutamate-cysteine ligase D5R55_RS17445 PF00730 HhH-GPD superfamily base excision DNA repair protein D5R55_RS17445 PF12833 Helix-turn-helix domain D5R55_RS17445 PF02805 Metal binding domain of Ada D5R55_RS17445 PF06029 AlkA N-terminal domain D5R55_RS17450 PF02805 Metal binding domain of Ada D5R55_RS17450 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D5R55_RS17450 PF12833 Helix-turn-helix domain D5R55_RS17450 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D5R55_RS17460 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D5R55_RS17465 PF07152 YaeQ protein D5R55_RS17475 PF13302 Acetyltransferase (GNAT) domain D5R55_RS17485 PF00563 EAL domain D5R55_RS17485 PF01590 GAF domain D5R55_RS17485 PF00990 Diguanylate cyclase, GGDEF domain D5R55_RS17485 PF00360 Phytochrome region D5R55_RS17490 PF10396 GTP-binding protein TrmE N-terminus D5R55_RS17490 PF12631 MnmE helical domain D5R55_RS17490 PF01926 50S ribosome-binding GTPase D5R55_RS17500 PF02096 60Kd inner membrane protein D5R55_RS17500 PF14849 YidC periplasmic domain D5R55_RS17505 PF01809 Putative membrane protein insertion efficiency factor D5R55_RS17510 PF00825 Ribonuclease P D5R55_RS17515 PF00468 Ribosomal protein L34 D5R55_RS17565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS17565 PF03466 LysR substrate binding domain D5R55_RS17570 PF01810 LysE type translocator D5R55_RS17575 PF02525 Flavodoxin-like fold D5R55_RS17580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS17580 PF03466 LysR substrate binding domain D5R55_RS17585 PF03435 Saccharopine dehydrogenase NADP binding domain D5R55_RS17610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5R55_RS17610 PF02203 Tar ligand binding domain homologue D5R55_RS17610 PF00672 HAMP domain D5R55_RS17640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS17640 PF03466 LysR substrate binding domain D5R55_RS17645 PF03466 LysR substrate binding domain D5R55_RS17645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS17650 PF03358 NADPH-dependent FMN reductase D5R55_RS17655 PF00248 Aldo/keto reductase family D5R55_RS17660 PF08361 MAATS-type transcriptional repressor, C-terminal region D5R55_RS17660 PF00440 Bacterial regulatory proteins, tetR family D5R55_RS17665 PF13243 Squalene-hopene cyclase C-terminal domain D5R55_RS17665 PF13249 Squalene-hopene cyclase N-terminal domain D5R55_RS17670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS17670 PF03466 LysR substrate binding domain D5R55_RS17675 PF01266 FAD dependent oxidoreductase D5R55_RS17685 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5R55_RS17685 PF04324 BFD-like [2Fe-2S] binding domain D5R55_RS17690 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5R55_RS17695 PF03466 LysR substrate binding domain D5R55_RS17695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS17705 PF00248 Aldo/keto reductase family D5R55_RS17715 PF00144 Beta-lactamase D5R55_RS17720 PF12697 Alpha/beta hydrolase family D5R55_RS17740 PF07171 MlrC C-terminus D5R55_RS17740 PF07364 Metallopeptidase family M81 D5R55_RS17745 PF00171 Aldehyde dehydrogenase family D5R55_RS17750 PF00202 Aminotransferase class-III D5R55_RS17755 PF00324 Amino acid permease D5R55_RS17760 PF12833 Helix-turn-helix domain D5R55_RS17775 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS17780 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D5R55_RS17785 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS17790 PF00005 ABC transporter D5R55_RS17790 PF00571 CBS domain D5R55_RS17810 PF00296 Luciferase-like monooxygenase D5R55_RS17820 PF02472 Biopolymer transport protein ExbD/TolR D5R55_RS17825 PF01618 MotA/TolQ/ExbB proton channel family D5R55_RS17830 PF03544 Gram-negative bacterial TonB protein C-terminal D5R55_RS17835 PF00296 Luciferase-like monooxygenase D5R55_RS17840 PF00005 ABC transporter D5R55_RS17845 PF00296 Luciferase-like monooxygenase D5R55_RS17850 PF00296 Luciferase-like monooxygenase D5R55_RS17855 PF07715 TonB-dependent Receptor Plug Domain D5R55_RS17855 PF00593 TonB dependent receptor D5R55_RS17860 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5R55_RS17870 PF07690 Major Facilitator Superfamily D5R55_RS17885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D5R55_RS17885 PF00005 ABC transporter D5R55_RS17890 PF12911 N-terminal TM domain of oligopeptide transport permease C D5R55_RS17890 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS17895 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS17900 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D5R55_RS17905 PF08028 Acyl-CoA dehydrogenase, C-terminal domain D5R55_RS17905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D5R55_RS17910 PF00593 TonB dependent receptor D5R55_RS17910 PF07715 TonB-dependent Receptor Plug Domain D5R55_RS17915 PF00296 Luciferase-like monooxygenase D5R55_RS17920 PF00296 Luciferase-like monooxygenase D5R55_RS17925 PF00296 Luciferase-like monooxygenase D5R55_RS17930 PF00296 Luciferase-like monooxygenase D5R55_RS17935 PF00296 Luciferase-like monooxygenase D5R55_RS17940 PF00158 Sigma-54 interaction domain D5R55_RS17955 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5R55_RS17960 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS17965 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS17970 PF00005 ABC transporter D5R55_RS17975 PF00296 Luciferase-like monooxygenase D5R55_RS17980 PF03972 MmgE/PrpD family D5R55_RS17985 PF07702 UTRA domain D5R55_RS17985 PF00392 Bacterial regulatory proteins, gntR family D5R55_RS17990 PF00939 Sodium:sulfate symporter transmembrane region D5R55_RS18005 PF07690 Major Facilitator Superfamily D5R55_RS18020 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) D5R55_RS18025 PF07702 UTRA domain D5R55_RS18025 PF00392 Bacterial regulatory proteins, gntR family D5R55_RS18030 PF00221 Aromatic amino acid lyase D5R55_RS18035 PF00005 ABC transporter D5R55_RS18040 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS18045 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS18050 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5R55_RS18060 PF07681 DoxX D5R55_RS18085 PF00701 Dihydrodipicolinate synthetase family D5R55_RS18090 PF07690 Major Facilitator Superfamily D5R55_RS18095 PF00294 pfkB family carbohydrate kinase D5R55_RS18100 PF00356 Bacterial regulatory proteins, lacI family D5R55_RS18105 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal D5R55_RS18105 PF01578 Cytochrome C assembly protein D5R55_RS18110 PF02661 Fic/DOC family D5R55_RS18115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS18115 PF03466 LysR substrate binding domain D5R55_RS18120 PF02678 Pirin D5R55_RS18120 PF17954 Quercetinase C-terminal cupin domain D5R55_RS18125 PF03358 NADPH-dependent FMN reductase D5R55_RS18135 PF04172 LrgB-like family D5R55_RS18140 PF03788 LrgA family D5R55_RS18145 PF07859 alpha/beta hydrolase fold D5R55_RS18150 PF02566 OsmC-like protein D5R55_RS18155 PF00440 Bacterial regulatory proteins, tetR family D5R55_RS18155 PF18665 Tetracyclin repressor-like, C-terminal domain D5R55_RS18160 PF00005 ABC transporter D5R55_RS18160 PF00664 ABC transporter transmembrane region D5R55_RS18170 PF00267 Gram-negative porin D5R55_RS18195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS18195 PF03466 LysR substrate binding domain D5R55_RS18200 PF00892 EamA-like transporter family D5R55_RS18205 PF13458 Periplasmic binding protein D5R55_RS18215 PF13183 4Fe-4S dicluster domain D5R55_RS18215 PF01565 FAD binding domain D5R55_RS18215 PF02913 FAD linked oxidases, C-terminal domain D5R55_RS18220 PF03466 LysR substrate binding domain D5R55_RS18220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS18225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS18225 PF03466 LysR substrate binding domain D5R55_RS18230 PF01810 LysE type translocator D5R55_RS18235 PF00296 Luciferase-like monooxygenase D5R55_RS18240 PF03358 NADPH-dependent FMN reductase D5R55_RS18250 PF00158 Sigma-54 interaction domain D5R55_RS18255 PF02733 Dak1 domain D5R55_RS18255 PF02734 DAK2 domain D5R55_RS18270 PF00083 Sugar (and other) transporter D5R55_RS18275 PF00694 Aconitase C-terminal domain D5R55_RS18275 PF00330 Aconitase family (aconitate hydratase) D5R55_RS18280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS18280 PF03466 LysR substrate binding domain D5R55_RS18305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D5R55_RS18310 PF02321 Outer membrane efflux protein D5R55_RS18315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS18315 PF03459 TOBE domain D5R55_RS18340 PF03358 NADPH-dependent FMN reductase D5R55_RS18350 PF12706 Beta-lactamase superfamily domain D5R55_RS18360 PF13614 AAA domain D5R55_RS18365 PF17762 HTH domain found in ParB protein D5R55_RS18365 PF02195 ParB-like nuclease domain D5R55_RS18385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS18385 PF03466 LysR substrate binding domain D5R55_RS18390 PF00709 Adenylosuccinate synthetase D5R55_RS18400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS18400 PF03466 LysR substrate binding domain D5R55_RS18415 PF03466 LysR substrate binding domain D5R55_RS18415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS18420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D5R55_RS18420 PF00529 HlyD membrane-fusion protein of T1SS D5R55_RS18425 PF00873 AcrB/AcrD/AcrF family D5R55_RS18430 PF02321 Outer membrane efflux protein D5R55_RS18435 PF01738 Dienelactone hydrolase family D5R55_RS18445 PF01965 DJ-1/PfpI family D5R55_RS18445 PF12833 Helix-turn-helix domain D5R55_RS18470 PF08808 RES domain D5R55_RS18475 PF00589 Phage integrase family D5R55_RS18475 PF02899 Phage integrase, N-terminal SAM-like domain D5R55_RS18480 PF00860 Permease family D5R55_RS18490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS18490 PF03466 LysR substrate binding domain D5R55_RS18505 PF02423 Ornithine cyclodeaminase/mu-crystallin family D5R55_RS18510 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D5R55_RS18515 PF00291 Pyridoxal-phosphate dependent enzyme D5R55_RS18520 PF01554 MatE D5R55_RS18525 PF03472 Autoinducer binding domain D5R55_RS18525 PF00196 Bacterial regulatory proteins, luxR family D5R55_RS18540 PF00975 Thioesterase domain D5R55_RS18545 PF00005 ABC transporter D5R55_RS18550 PF02687 FtsX-like permease family D5R55_RS18550 PF12704 MacB-like periplasmic core domain D5R55_RS18580 PF03150 Di-haem cytochrome c peroxidase D5R55_RS18600 PF12697 Alpha/beta hydrolase family D5R55_RS18605 PF00550 Phosphopantetheine attachment site D5R55_RS18615 PF00501 AMP-binding enzyme D5R55_RS18620 PF00501 AMP-binding enzyme D5R55_RS18625 PF08659 KR domain D5R55_RS18625 PF00109 Beta-ketoacyl synthase, N-terminal domain D5R55_RS18625 PF00698 Acyl transferase domain D5R55_RS18625 PF14765 Polyketide synthase dehydratase D5R55_RS18625 PF00550 Phosphopantetheine attachment site D5R55_RS18625 PF16197 Ketoacyl-synthetase C-terminal extension D5R55_RS18625 PF02801 Beta-ketoacyl synthase, C-terminal domain D5R55_RS18630 PF00668 Condensation domain D5R55_RS18630 PF00550 Phosphopantetheine attachment site D5R55_RS18630 PF00501 AMP-binding enzyme D5R55_RS18630 PF13193 AMP-binding enzyme C-terminal domain D5R55_RS18635 PF07993 Male sterility protein D5R55_RS18635 PF00550 Phosphopantetheine attachment site D5R55_RS18635 PF07993 Male sterility protein D5R55_RS18635 PF00501 AMP-binding enzyme D5R55_RS18635 PF13193 AMP-binding enzyme C-terminal domain D5R55_RS18635 PF00501 AMP-binding enzyme D5R55_RS18635 PF13193 AMP-binding enzyme C-terminal domain D5R55_RS18635 PF00668 Condensation domain D5R55_RS18635 PF00550 Phosphopantetheine attachment site D5R55_RS18635 PF00668 Condensation domain D5R55_RS18650 PF00149 Calcineurin-like phosphoesterase D5R55_RS18740 PF13193 AMP-binding enzyme C-terminal domain D5R55_RS18740 PF00501 AMP-binding enzyme D5R55_RS18745 PF00106 short chain dehydrogenase D5R55_RS18750 PF02803 Thiolase, C-terminal domain D5R55_RS18750 PF00108 Thiolase, N-terminal domain D5R55_RS18755 PF00440 Bacterial regulatory proteins, tetR family D5R55_RS18755 PF08362 YcdC-like protein, C-terminal region D5R55_RS18760 PF07687 Peptidase dimerisation domain D5R55_RS18760 PF01546 Peptidase family M20/M25/M40 D5R55_RS18765 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D5R55_RS18765 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5R55_RS18770 PF01180 Dihydroorotate dehydrogenase D5R55_RS18775 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin D5R55_RS18780 PF01979 Amidohydrolase family D5R55_RS18785 PF01773 Na+ dependent nucleoside transporter N-terminus D5R55_RS18785 PF07662 Na+ dependent nucleoside transporter C-terminus D5R55_RS18790 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain D5R55_RS18790 PF00591 Glycosyl transferase family, a/b domain D5R55_RS18790 PF02885 Glycosyl transferase family, helical bundle domain D5R55_RS18795 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D5R55_RS18800 PF00355 Rieske [2Fe-2S] domain D5R55_RS18805 PF01625 Peptide methionine sulfoxide reductase D5R55_RS18810 PF00578 AhpC/TSA family D5R55_RS18810 PF02683 Cytochrome C biogenesis protein transmembrane region D5R55_RS18810 PF17991 Thioredoxin like C-terminal domain D5R55_RS18815 PF01641 SelR domain D5R55_RS18830 PF00166 Chaperonin 10 Kd subunit D5R55_RS18835 PF00118 TCP-1/cpn60 chaperonin family D5R55_RS18850 PF01566 Natural resistance-associated macrophage protein D5R55_RS18860 PF00440 Bacterial regulatory proteins, tetR family D5R55_RS18860 PF17932 Tetracyclin repressor-like, C-terminal domain D5R55_RS18885 PF00563 EAL domain D5R55_RS18885 PF00990 Diguanylate cyclase, GGDEF domain D5R55_RS18885 PF03707 Bacterial signalling protein N terminal repeat D5R55_RS18890 PF00561 alpha/beta hydrolase fold D5R55_RS18895 PF03280 Proteobacterial lipase chaperone protein D5R55_RS18900 PF00486 Transcriptional regulatory protein, C terminal D5R55_RS18900 PF00072 Response regulator receiver domain D5R55_RS18905 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB D5R55_RS18905 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS18905 PF00672 HAMP domain D5R55_RS18905 PF08448 PAS fold D5R55_RS18905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS18920 PF13193 AMP-binding enzyme C-terminal domain D5R55_RS18920 PF00501 AMP-binding enzyme D5R55_RS18935 PF00174 Oxidoreductase molybdopterin binding domain D5R55_RS18940 PF01292 Prokaryotic cytochrome b561 D5R55_RS18945 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D5R55_RS18945 PF12806 Acetyl-CoA dehydrogenase C-terminal like D5R55_RS18945 PF02770 Acyl-CoA dehydrogenase, middle domain D5R55_RS18945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D5R55_RS18955 PF00108 Thiolase, N-terminal domain D5R55_RS18955 PF02803 Thiolase, C-terminal domain D5R55_RS18960 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D5R55_RS18960 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D5R55_RS18970 PF05368 NmrA-like family D5R55_RS18985 PF00483 Nucleotidyl transferase D5R55_RS18985 PF01050 Mannose-6-phosphate isomerase D5R55_RS18990 PF02397 Bacterial sugar transferase D5R55_RS18995 PF01451 Low molecular weight phosphotyrosine protein phosphatase D5R55_RS19005 PF02563 Polysaccharide biosynthesis/export protein D5R55_RS19005 PF10531 SLBB domain D5R55_RS19010 PF13807 G-rich domain on putative tyrosine kinase D5R55_RS19010 PF13614 AAA domain D5R55_RS19010 PF02706 Chain length determinant protein D5R55_RS19030 PF13439 Glycosyltransferase Family 4 D5R55_RS19030 PF00534 Glycosyl transferases group 1 D5R55_RS19050 PF09339 IclR helix-turn-helix domain D5R55_RS19050 PF01614 Bacterial transcriptional regulator D5R55_RS19070 PF00771 FHIPEP family D5R55_RS19075 PF01312 FlhB HrpN YscU SpaS Family D5R55_RS19080 PF01311 Bacterial export proteins, family 1 D5R55_RS19085 PF01313 Bacterial export proteins, family 3 D5R55_RS19090 PF00813 FliP family D5R55_RS19095 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D5R55_RS19105 PF00700 Bacterial flagellin C-terminal helical region D5R55_RS19105 PF00669 Bacterial flagellin N-terminal helical region D5R55_RS19110 PF00486 Transcriptional regulatory protein, C terminal D5R55_RS19110 PF00072 Response regulator receiver domain D5R55_RS19115 PF13188 PAS domain D5R55_RS19115 PF00989 PAS fold D5R55_RS19115 PF13426 PAS domain D5R55_RS19115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS19115 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS19120 PF02049 Flagellar hook-basal body complex protein FliE D5R55_RS19125 PF08345 Flagellar M-ring protein C-terminal D5R55_RS19125 PF01514 Secretory protein of YscJ/FliF family D5R55_RS19130 PF01706 FliG C-terminal domain D5R55_RS19130 PF14841 FliG middle domain D5R55_RS19130 PF14842 FliG N-terminal domain D5R55_RS19140 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D5R55_RS19140 PF18269 T3SS EscN ATPase C-terminal domain D5R55_RS19150 PF02465 Flagellar hook-associated protein 2 N-terminus D5R55_RS19150 PF07196 Flagellin hook IN motif D5R55_RS19150 PF07195 Flagellar hook-associated protein 2 C-terminus D5R55_RS19170 PF04542 Sigma-70 region 2 D5R55_RS19170 PF04545 Sigma-70, region 4 D5R55_RS19175 PF01618 MotA/TolQ/ExbB proton channel family D5R55_RS19180 PF00691 OmpA family D5R55_RS19180 PF13677 Membrane MotB of proton-channel complex MotA/MotB D5R55_RS19195 PF10135 Rod binding protein D5R55_RS19195 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase D5R55_RS19210 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D5R55_RS19210 PF00460 Flagella basal body rod protein D5R55_RS19220 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D5R55_RS19220 PF07196 Flagellin hook IN motif D5R55_RS19220 PF00460 Flagella basal body rod protein D5R55_RS19220 PF07559 Flagellar basal body protein FlaE D5R55_RS19225 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D5R55_RS19225 PF00460 Flagella basal body rod protein D5R55_RS19230 PF00460 Flagella basal body rod protein D5R55_RS19230 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D5R55_RS19235 PF02107 Flagellar L-ring protein D5R55_RS19240 PF02119 Flagellar P-ring protein D5R55_RS19300 PF15976 CS1-pili formation C-terminal D5R55_RS19300 PF16967 E-set like domain D5R55_RS19325 PF00196 Bacterial regulatory proteins, luxR family D5R55_RS19325 PF00072 Response regulator receiver domain D5R55_RS19330 PF00072 Response regulator receiver domain D5R55_RS19330 PF09456 RcsC Alpha-Beta-Loop (ABL) D5R55_RS19330 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS19330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS19340 PF05662 Coiled stalk of trimeric autotransporter adhesin D5R55_RS19340 PF05658 Head domain of trimeric autotransporter adhesin D5R55_RS19340 PF03895 YadA-like membrane anchor domain D5R55_RS19340 PF13018 Extended Signal Peptide of Type V secretion system D5R55_RS19355 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5R55_RS19355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS19355 PF01627 Hpt domain D5R55_RS19355 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS19355 PF00072 Response regulator receiver domain D5R55_RS19355 PF00989 PAS fold D5R55_RS19380 PF00196 Bacterial regulatory proteins, luxR family D5R55_RS19380 PF00072 Response regulator receiver domain D5R55_RS19390 PF00072 Response regulator receiver domain D5R55_RS19390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS19390 PF09456 RcsC Alpha-Beta-Loop (ABL) D5R55_RS19390 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS19395 PF00072 Response regulator receiver domain D5R55_RS19395 PF00196 Bacterial regulatory proteins, luxR family D5R55_RS19405 PF13018 Extended Signal Peptide of Type V secretion system D5R55_RS19405 PF05662 Coiled stalk of trimeric autotransporter adhesin D5R55_RS19405 PF05658 Head domain of trimeric autotransporter adhesin D5R55_RS19405 PF03895 YadA-like membrane anchor domain D5R55_RS19430 PF01791 DeoC/LacD family aldolase D5R55_RS19435 PF00455 DeoR C terminal sensor domain D5R55_RS19435 PF08220 DeoR-like helix-turn-helix domain D5R55_RS19445 PF07690 Major Facilitator Superfamily D5R55_RS19450 PF00294 pfkB family carbohydrate kinase D5R55_RS19460 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH D5R55_RS19480 PF07690 Major Facilitator Superfamily D5R55_RS19485 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B D5R55_RS19485 PF00970 Oxidoreductase FAD-binding domain D5R55_RS19490 PF01180 Dihydroorotate dehydrogenase D5R55_RS19495 PF01546 Peptidase family M20/M25/M40 D5R55_RS19495 PF07687 Peptidase dimerisation domain D5R55_RS19505 PF00355 Rieske [2Fe-2S] domain D5R55_RS19515 PF00111 2Fe-2S iron-sulfur cluster binding domain D5R55_RS19530 PF04820 Tryptophan halogenase D5R55_RS19535 PF08933 Domain of unknown function (DUF1864) D5R55_RS19540 PF04820 Tryptophan halogenase D5R55_RS19545 PF00355 Rieske [2Fe-2S] domain D5R55_RS19590 PF02203 Tar ligand binding domain homologue D5R55_RS19590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5R55_RS19590 PF00672 HAMP domain D5R55_RS19605 PF01584 CheW-like domain D5R55_RS19615 PF00672 HAMP domain D5R55_RS19615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5R55_RS19615 PF02203 Tar ligand binding domain homologue D5R55_RS19625 PF01037 Lrp/AsnC ligand binding domain D5R55_RS19630 PF00291 Pyridoxal-phosphate dependent enzyme D5R55_RS19640 PF03466 LysR substrate binding domain D5R55_RS19640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS19645 PF01546 Peptidase family M20/M25/M40 D5R55_RS19645 PF07687 Peptidase dimerisation domain D5R55_RS19650 PF07690 Major Facilitator Superfamily D5R55_RS19660 PF00672 HAMP domain D5R55_RS19660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5R55_RS19660 PF02203 Tar ligand binding domain homologue D5R55_RS19665 PF02954 Bacterial regulatory protein, Fis family D5R55_RS19665 PF00072 Response regulator receiver domain D5R55_RS19665 PF00158 Sigma-54 interaction domain D5R55_RS19670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS19675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS19675 PF03466 LysR substrate binding domain D5R55_RS19680 PF00857 Isochorismatase family D5R55_RS19695 PF00486 Transcriptional regulatory protein, C terminal D5R55_RS19695 PF00072 Response regulator receiver domain D5R55_RS19700 PF00672 HAMP domain D5R55_RS19700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS19700 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS19705 PF02321 Outer membrane efflux protein D5R55_RS19710 PF13533 Biotin-lipoyl like D5R55_RS19715 PF00873 AcrB/AcrD/AcrF family D5R55_RS19730 PF00324 Amino acid permease D5R55_RS19740 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS19745 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS19750 PF00005 ABC transporter D5R55_RS19770 PF12697 Alpha/beta hydrolase family D5R55_RS19790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS19790 PF03466 LysR substrate binding domain D5R55_RS19810 PF07969 Amidohydrolase family D5R55_RS19830 PF00753 Metallo-beta-lactamase superfamily D5R55_RS19835 PF03466 LysR substrate binding domain D5R55_RS19835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS19840 PF00196 Bacterial regulatory proteins, luxR family D5R55_RS19850 PF12833 Helix-turn-helix domain D5R55_RS19850 PF02311 AraC-like ligand binding domain D5R55_RS19855 PF00196 Bacterial regulatory proteins, luxR family D5R55_RS19860 PF07969 Amidohydrolase family D5R55_RS19870 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D5R55_RS19875 PF07690 Major Facilitator Superfamily D5R55_RS19880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS19880 PF03466 LysR substrate binding domain D5R55_RS19885 PF00034 Cytochrome c D5R55_RS19885 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D5R55_RS19885 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D5R55_RS19890 PF00111 2Fe-2S iron-sulfur cluster binding domain D5R55_RS19890 PF01799 [2Fe-2S] binding domain D5R55_RS19895 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D5R55_RS19895 PF00034 Cytochrome c D5R55_RS19895 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D5R55_RS19905 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5R55_RS19910 PF02321 Outer membrane efflux protein D5R55_RS19915 PF13533 Biotin-lipoyl like D5R55_RS19925 PF00561 alpha/beta hydrolase fold D5R55_RS19935 PF00561 alpha/beta hydrolase fold D5R55_RS19940 PF00196 Bacterial regulatory proteins, luxR family D5R55_RS19955 PF03466 LysR substrate binding domain D5R55_RS19955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS19970 PF01263 Aldose 1-epimerase D5R55_RS19980 PF00293 NUDIX domain D5R55_RS19985 PF12833 Helix-turn-helix domain D5R55_RS19985 PF14525 AraC-binding-like domain D5R55_RS19990 PF00106 short chain dehydrogenase D5R55_RS19995 PF00561 alpha/beta hydrolase fold D5R55_RS20000 PF10017 Histidine-specific methyltransferase, SAM-dependent D5R55_RS20015 PF00561 alpha/beta hydrolase fold D5R55_RS20040 PF07690 Major Facilitator Superfamily D5R55_RS20050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS20050 PF03466 LysR substrate binding domain D5R55_RS20055 PF00196 Bacterial regulatory proteins, luxR family D5R55_RS20060 PF02798 Glutathione S-transferase, N-terminal domain D5R55_RS20060 PF00043 Glutathione S-transferase, C-terminal domain D5R55_RS20105 PF00582 Universal stress protein family D5R55_RS20125 PF02899 Phage integrase, N-terminal SAM-like domain D5R55_RS20125 PF00589 Phage integrase family D5R55_RS20135 PF13458 Periplasmic binding protein D5R55_RS20145 PF00392 Bacterial regulatory proteins, gntR family D5R55_RS20145 PF00155 Aminotransferase class I and II D5R55_RS20155 PF00392 Bacterial regulatory proteins, gntR family D5R55_RS20155 PF00155 Aminotransferase class I and II D5R55_RS20160 PF03781 Sulfatase-modifying factor enzyme 1 D5R55_RS20175 PF02391 MoaE protein D5R55_RS20180 PF04055 Radical SAM superfamily D5R55_RS20180 PF06463 Molybdenum Cofactor Synthesis C D5R55_RS20190 PF03453 MoeA N-terminal region (domain I and II) D5R55_RS20190 PF03454 MoeA C-terminal region (domain IV) D5R55_RS20190 PF00994 Probable molybdopterin binding domain D5R55_RS20195 PF02634 FdhD/NarQ family D5R55_RS20200 PF01654 Cytochrome bd terminal oxidase subunit I D5R55_RS20205 PF02322 Cytochrome bd terminal oxidase subunit II D5R55_RS20210 PF01062 Bestrophin, RFP-TM, chloride channel D5R55_RS20225 PF00005 ABC transporter D5R55_RS20230 PF07687 Peptidase dimerisation domain D5R55_RS20230 PF01546 Peptidase family M20/M25/M40 D5R55_RS20240 PF01042 Endoribonuclease L-PSP D5R55_RS20265 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS20275 PF08402 TOBE domain D5R55_RS20275 PF00005 ABC transporter D5R55_RS20280 PF00355 Rieske [2Fe-2S] domain D5R55_RS20280 PF00848 Ring hydroxylating alpha subunit (catalytic domain) D5R55_RS20285 PF03466 LysR substrate binding domain D5R55_RS20285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS20290 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5R55_RS20295 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS20300 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS20305 PF00579 tRNA synthetases class I (W and Y) D5R55_RS20315 PF03265 Deoxyribonuclease II D5R55_RS20355 PF00384 Molybdopterin oxidoreductase D5R55_RS20360 PF00004 ATPase family associated with various cellular activities (AAA) D5R55_RS20360 PF07724 AAA domain (Cdc48 subfamily) D5R55_RS20360 PF17871 AAA lid domain D5R55_RS20360 PF02861 Clp amino terminal domain, pathogenicity island component D5R55_RS20360 PF10431 C-terminal, D2-small domain, of ClpB protein D5R55_RS20370 PF04454 Encapsulating protein for peroxidase D5R55_RS20375 PF04261 Dyp-type peroxidase family D5R55_RS20400 PF00155 Aminotransferase class I and II D5R55_RS20400 PF00392 Bacterial regulatory proteins, gntR family D5R55_RS20405 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D5R55_RS20405 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D5R55_RS20410 PF14759 Reductase C-terminal D5R55_RS20410 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5R55_RS20425 PF01914 MarC family integral membrane protein D5R55_RS20435 PF08240 Alcohol dehydrogenase GroES-like domain D5R55_RS20435 PF00107 Zinc-binding dehydrogenase D5R55_RS20435 PF13823 Alcohol dehydrogenase GroES-associated D5R55_RS20445 PF13493 Domain of unknown function (DUF4118) D5R55_RS20445 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS20445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS20445 PF02702 Osmosensitive K+ channel His kinase sensor domain D5R55_RS20460 PF00664 ABC transporter transmembrane region D5R55_RS20460 PF00005 ABC transporter D5R55_RS20470 PF00106 short chain dehydrogenase D5R55_RS20480 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D5R55_RS20485 PF16861 Carbamoyltransferase C-terminus D5R55_RS20485 PF02543 Carbamoyltransferase N-terminus D5R55_RS20490 PF01385 Probable transposase D5R55_RS20490 PF07282 Putative transposase DNA-binding domain D5R55_RS20490 PF12323 Helix-turn-helix domain D5R55_RS20500 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D5R55_RS20510 PF02954 Bacterial regulatory protein, Fis family D5R55_RS20510 PF00158 Sigma-54 interaction domain D5R55_RS20515 PF00158 Sigma-54 interaction domain D5R55_RS20515 PF00072 Response regulator receiver domain D5R55_RS20515 PF02954 Bacterial regulatory protein, Fis family D5R55_RS20530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS20530 PF01627 Hpt domain D5R55_RS20530 PF17149 Periplasmic sensor domain found in signal transduction proteins D5R55_RS20530 PF00672 HAMP domain D5R55_RS20530 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS20530 PF00072 Response regulator receiver domain D5R55_RS20535 PF01370 NAD dependent epimerase/dehydratase family D5R55_RS20540 PF13439 Glycosyltransferase Family 4 D5R55_RS20540 PF00534 Glycosyl transferases group 1 D5R55_RS20555 PF00106 short chain dehydrogenase D5R55_RS20585 PF01566 Natural resistance-associated macrophage protein D5R55_RS20590 PF03167 Uracil DNA glycosylase superfamily D5R55_RS20595 PF00072 Response regulator receiver domain D5R55_RS20595 PF00486 Transcriptional regulatory protein, C terminal D5R55_RS20605 PF00571 CBS domain D5R55_RS20635 PF05974 Domain of unknown function (DUF892) D5R55_RS20640 PF04963 Sigma-54 factor, core binding domain D5R55_RS20640 PF04552 Sigma-54, DNA binding domain D5R55_RS20640 PF00309 Sigma-54 factor, Activator interacting domain (AID) D5R55_RS20660 PF00199 Catalase D5R55_RS20660 PF18011 C-terminal domain found in long catalases D5R55_RS20660 PF06628 Catalase-related immune-responsive D5R55_RS20665 PF02735 Ku70/Ku80 beta-barrel domain D5R55_RS20670 PF13298 DNA polymerase Ligase (LigD) D5R55_RS20670 PF01068 ATP dependent DNA ligase domain D5R55_RS20670 PF04679 ATP dependent DNA ligase C terminal region D5R55_RS20695 PF01965 DJ-1/PfpI family D5R55_RS20710 PF02666 Phosphatidylserine decarboxylase D5R55_RS20720 PF00128 Alpha amylase, catalytic domain D5R55_RS20725 PF02446 4-alpha-glucanotransferase D5R55_RS20730 PF11941 Domain of unknown function (DUF3459) D5R55_RS20730 PF00128 Alpha amylase, catalytic domain D5R55_RS20730 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D5R55_RS20735 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D5R55_RS20735 PF00128 Alpha amylase, catalytic domain D5R55_RS20740 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D5R55_RS20740 PF00128 Alpha amylase, catalytic domain D5R55_RS20740 PF02806 Alpha amylase, C-terminal all-beta domain D5R55_RS20745 PF16657 Maltogenic Amylase, C-terminal domain D5R55_RS20745 PF00128 Alpha amylase, catalytic domain D5R55_RS20750 PF00128 Alpha amylase, catalytic domain D5R55_RS20750 PF11896 Domain of unknown function (DUF3416) D5R55_RS20765 PF13396 Phospholipase_D-nuclease N-terminal D5R55_RS20765 PF13091 PLD-like domain D5R55_RS20775 PF02308 MgtC family D5R55_RS20785 PF13085 2Fe-2S iron-sulfur cluster binding domain D5R55_RS20790 PF10005 zinc-ribbon domain D5R55_RS20790 PF15887 Putative zinc-binding metallo-peptidase D5R55_RS20825 PF13419 Haloacid dehalogenase-like hydrolase D5R55_RS20830 PF07690 Major Facilitator Superfamily D5R55_RS20840 PF03466 LysR substrate binding domain D5R55_RS20840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS20850 PF13404 AsnC-type helix-turn-helix domain D5R55_RS20850 PF01037 Lrp/AsnC ligand binding domain D5R55_RS20855 PF00593 TonB dependent receptor D5R55_RS20855 PF07715 TonB-dependent Receptor Plug Domain D5R55_RS20865 PF01618 MotA/TolQ/ExbB proton channel family D5R55_RS20870 PF02472 Biopolymer transport protein ExbD/TolR D5R55_RS20875 PF00005 ABC transporter D5R55_RS20875 PF06472 ABC transporter transmembrane region 2 D5R55_RS20880 PF00085 Thioredoxin D5R55_RS20885 PF01523 Putative modulator of DNA gyrase D5R55_RS20890 PF01523 Putative modulator of DNA gyrase D5R55_RS20900 PF08281 Sigma-70, region 4 D5R55_RS20900 PF04542 Sigma-70 region 2 D5R55_RS20905 PF01590 GAF domain D5R55_RS20905 PF02954 Bacterial regulatory protein, Fis family D5R55_RS20910 PF00107 Zinc-binding dehydrogenase D5R55_RS20910 PF08240 Alcohol dehydrogenase GroES-like domain D5R55_RS20915 PF00171 Aldehyde dehydrogenase family D5R55_RS20920 PF01047 MarR family D5R55_RS20945 PF03129 Anticodon binding domain D5R55_RS20945 PF13393 Histidyl-tRNA synthetase D5R55_RS20960 PF02627 Carboxymuconolactone decarboxylase family D5R55_RS20970 PF00392 Bacterial regulatory proteins, gntR family D5R55_RS20970 PF07729 FCD domain D5R55_RS20980 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D5R55_RS20980 PF13378 Enolase C-terminal domain-like D5R55_RS20985 PF00775 Dioxygenase D5R55_RS20985 PF04444 Catechol dioxygenase N terminus D5R55_RS20990 PF00355 Rieske [2Fe-2S] domain D5R55_RS20990 PF00848 Ring hydroxylating alpha subunit (catalytic domain) D5R55_RS20995 PF00866 Ring hydroxylating beta subunit D5R55_RS21000 PF00175 Oxidoreductase NAD-binding domain D5R55_RS21000 PF00970 Oxidoreductase FAD-binding domain D5R55_RS21000 PF00111 2Fe-2S iron-sulfur cluster binding domain D5R55_RS21005 PF00106 short chain dehydrogenase D5R55_RS21010 PF01042 Endoribonuclease L-PSP D5R55_RS21015 PF00106 short chain dehydrogenase D5R55_RS21020 PF00873 AcrB/AcrD/AcrF family D5R55_RS21030 PF00440 Bacterial regulatory proteins, tetR family D5R55_RS21040 PF05973 Phage derived protein Gp49-like (DUF891) D5R55_RS21045 PF01381 Helix-turn-helix D5R55_RS21050 PF00034 Cytochrome c D5R55_RS21050 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D5R55_RS21060 PF00115 Cytochrome C and Quinol oxidase polypeptide I D5R55_RS21065 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D5R55_RS21070 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D5R55_RS21070 PF00205 Thiamine pyrophosphate enzyme, central domain D5R55_RS21070 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D5R55_RS21100 PF00293 NUDIX domain D5R55_RS21105 PF00529 HlyD membrane-fusion protein of T1SS D5R55_RS21105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D5R55_RS21110 PF07690 Major Facilitator Superfamily D5R55_RS21115 PF02321 Outer membrane efflux protein D5R55_RS21120 PF00486 Transcriptional regulatory protein, C terminal D5R55_RS21120 PF00072 Response regulator receiver domain D5R55_RS21145 PF00381 PTS HPr component phosphorylation site D5R55_RS21150 PF03831 PhnA domain D5R55_RS21150 PF08274 PhnA Zinc-Ribbon D5R55_RS21195 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5R55_RS21200 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS21205 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS21210 PF00296 Luciferase-like monooxygenase D5R55_RS21215 PF00005 ABC transporter D5R55_RS21220 PF02653 Branched-chain amino acid transport system / permease component D5R55_RS21225 PF13407 Periplasmic binding protein domain D5R55_RS21250 PF13657 HipA N-terminal domain D5R55_RS21250 PF07804 HipA-like C-terminal domain D5R55_RS21255 PF01381 Helix-turn-helix D5R55_RS21260 PF02308 MgtC family D5R55_RS21265 PF00571 CBS domain D5R55_RS21290 PF02668 Taurine catabolism dioxygenase TauD, TfdA family D5R55_RS21300 PF00005 ABC transporter D5R55_RS21305 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS21315 PF00296 Luciferase-like monooxygenase D5R55_RS21325 PF00174 Oxidoreductase molybdopterin binding domain D5R55_RS21330 PF13609 Gram-negative porin D5R55_RS21340 PF09084 NMT1/THI5 like D5R55_RS21350 PF01483 Proprotein convertase P-domain D5R55_RS21350 PF07504 Fungalysin/Thermolysin Propeptide Motif D5R55_RS21350 PF01447 Thermolysin metallopeptidase, catalytic domain D5R55_RS21350 PF02868 Thermolysin metallopeptidase, alpha-helical domain D5R55_RS21365 PF04397 LytTr DNA-binding domain D5R55_RS21365 PF00072 Response regulator receiver domain D5R55_RS21370 PF07694 5TMR of 5TMR-LYT D5R55_RS21370 PF06580 Histidine kinase D5R55_RS21370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS21400 PF00378 Enoyl-CoA hydratase/isomerase D5R55_RS21405 PF12146 Serine aminopeptidase, S33 D5R55_RS21410 PF13193 AMP-binding enzyme C-terminal domain D5R55_RS21410 PF00501 AMP-binding enzyme D5R55_RS21415 PF00106 short chain dehydrogenase D5R55_RS21420 PF05199 GMC oxidoreductase D5R55_RS21425 PF03922 OmpW family D5R55_RS21435 PF00107 Zinc-binding dehydrogenase D5R55_RS21435 PF14765 Polyketide synthase dehydratase D5R55_RS21435 PF00550 Phosphopantetheine attachment site D5R55_RS21435 PF08659 KR domain D5R55_RS21435 PF02801 Beta-ketoacyl synthase, C-terminal domain D5R55_RS21435 PF00109 Beta-ketoacyl synthase, N-terminal domain D5R55_RS21435 PF16197 Ketoacyl-synthetase C-terminal extension D5R55_RS21435 PF08240 Alcohol dehydrogenase GroES-like domain D5R55_RS21435 PF00698 Acyl transferase domain D5R55_RS21440 PF00107 Zinc-binding dehydrogenase D5R55_RS21440 PF08240 Alcohol dehydrogenase GroES-like domain D5R55_RS21445 PF08240 Alcohol dehydrogenase GroES-like domain D5R55_RS21445 PF00107 Zinc-binding dehydrogenase D5R55_RS21455 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5R55_RS21455 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D5R55_RS21460 PF00561 alpha/beta hydrolase fold D5R55_RS21465 PF00561 alpha/beta hydrolase fold D5R55_RS21470 PF00106 short chain dehydrogenase D5R55_RS21475 PF00561 alpha/beta hydrolase fold D5R55_RS21480 PF00440 Bacterial regulatory proteins, tetR family D5R55_RS21495 PF06165 Glycosyltransferase family 36 D5R55_RS21495 PF10091 Putative glucoamylase D5R55_RS21495 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain D5R55_RS21595 PF02779 Transketolase, pyrimidine binding domain D5R55_RS21595 PF02780 Transketolase, C-terminal domain D5R55_RS21595 PF00456 Transketolase, thiamine diphosphate binding domain D5R55_RS21645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS21645 PF03466 LysR substrate binding domain D5R55_RS21650 PF05368 NmrA-like family D5R55_RS21655 PF00155 Aminotransferase class I and II D5R55_RS21655 PF00392 Bacterial regulatory proteins, gntR family D5R55_RS21660 PF02566 OsmC-like protein D5R55_RS21675 PF02627 Carboxymuconolactone decarboxylase family D5R55_RS21685 PF16123 Hydroxyacylglutathione hydrolase C-terminus D5R55_RS21685 PF00753 Metallo-beta-lactamase superfamily D5R55_RS21690 PF01161 Phosphatidylethanolamine-binding protein D5R55_RS21700 PF01638 HxlR-like helix-turn-helix D5R55_RS21705 PF02525 Flavodoxin-like fold D5R55_RS21720 PF01638 HxlR-like helix-turn-helix D5R55_RS21725 PF05368 NmrA-like family D5R55_RS21735 PF05336 L-rhamnose mutarotase D5R55_RS21745 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D5R55_RS21745 PF13378 Enolase C-terminal domain-like D5R55_RS21750 PF00701 Dihydrodipicolinate synthetase family D5R55_RS21760 PF00392 Bacterial regulatory proteins, gntR family D5R55_RS21760 PF07729 FCD domain D5R55_RS21770 PF01266 FAD dependent oxidoreductase D5R55_RS21775 PF01042 Endoribonuclease L-PSP D5R55_RS21780 PF13458 Periplasmic binding protein D5R55_RS21790 PF11862 Domain of unknown function (DUF3382) D5R55_RS21790 PF02653 Branched-chain amino acid transport system / permease component D5R55_RS21795 PF00005 ABC transporter D5R55_RS21795 PF12399 Branched-chain amino acid ATP-binding cassette transporter D5R55_RS21800 PF00005 ABC transporter D5R55_RS21805 PF07690 Major Facilitator Superfamily D5R55_RS21810 PF00483 Nucleotidyl transferase D5R55_RS21815 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase D5R55_RS21820 PF04321 RmlD substrate binding domain D5R55_RS21825 PF16363 GDP-mannose 4,6 dehydratase D5R55_RS21835 PF00011 Hsp20/alpha crystallin family D5R55_RS21840 PF02780 Transketolase, C-terminal domain D5R55_RS21840 PF02779 Transketolase, pyrimidine binding domain D5R55_RS21845 PF00456 Transketolase, thiamine diphosphate binding domain D5R55_RS21850 PF07690 Major Facilitator Superfamily D5R55_RS21860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS21860 PF03466 LysR substrate binding domain D5R55_RS21865 PF03466 LysR substrate binding domain D5R55_RS21865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS21870 PF00375 Sodium:dicarboxylate symporter family D5R55_RS21880 PF07690 Major Facilitator Superfamily D5R55_RS21885 PF08448 PAS fold D5R55_RS21885 PF00990 Diguanylate cyclase, GGDEF domain D5R55_RS21890 PF03466 LysR substrate binding domain D5R55_RS21890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS21895 PF13460 NAD(P)H-binding D5R55_RS21915 PF07687 Peptidase dimerisation domain D5R55_RS21915 PF01546 Peptidase family M20/M25/M40 D5R55_RS21920 PF00171 Aldehyde dehydrogenase family D5R55_RS21925 PF01266 FAD dependent oxidoreductase D5R55_RS21930 PF01266 FAD dependent oxidoreductase D5R55_RS21945 PF01266 FAD dependent oxidoreductase D5R55_RS21950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D5R55_RS21950 PF00005 ABC transporter D5R55_RS21955 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS21955 PF12911 N-terminal TM domain of oligopeptide transport permease C D5R55_RS21960 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS21970 PF02203 Tar ligand binding domain homologue D5R55_RS21970 PF00672 HAMP domain D5R55_RS21970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5R55_RS21990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D5R55_RS21995 PF00202 Aminotransferase class-III D5R55_RS22000 PF01037 Lrp/AsnC ligand binding domain D5R55_RS22005 PF00171 Aldehyde dehydrogenase family D5R55_RS22030 PF01966 HD domain D5R55_RS22030 PF11871 Domain of unknown function (DUF3391) D5R55_RS22045 PF10997 Alternate to MurJ D5R55_RS22055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D5R55_RS22060 PF00005 ABC transporter D5R55_RS22060 PF12704 MacB-like periplasmic core domain D5R55_RS22060 PF02687 FtsX-like permease family D5R55_RS22065 PF02321 Outer membrane efflux protein D5R55_RS22075 PF00664 ABC transporter transmembrane region D5R55_RS22075 PF00005 ABC transporter D5R55_RS22080 PF00664 ABC transporter transmembrane region D5R55_RS22080 PF00005 ABC transporter D5R55_RS22105 PF01638 HxlR-like helix-turn-helix D5R55_RS22115 PF00106 short chain dehydrogenase D5R55_RS22120 PF00392 Bacterial regulatory proteins, gntR family D5R55_RS22120 PF07729 FCD domain D5R55_RS22125 PF00155 Aminotransferase class I and II D5R55_RS22135 PF07690 Major Facilitator Superfamily D5R55_RS22140 PF00356 Bacterial regulatory proteins, lacI family D5R55_RS22145 PF00920 Dehydratase family D5R55_RS22155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS22155 PF03466 LysR substrate binding domain D5R55_RS22160 PF01266 FAD dependent oxidoreductase D5R55_RS22170 PF07690 Major Facilitator Superfamily D5R55_RS22175 PF02203 Tar ligand binding domain homologue D5R55_RS22175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5R55_RS22175 PF00672 HAMP domain D5R55_RS22180 PF02203 Tar ligand binding domain homologue D5R55_RS22180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5R55_RS22180 PF00672 HAMP domain D5R55_RS22195 PF08666 SAF domain D5R55_RS22195 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus D5R55_RS22200 PF08125 Mannitol dehydrogenase C-terminal domain D5R55_RS22200 PF01232 Mannitol dehydrogenase Rossmann domain D5R55_RS22205 PF00107 Zinc-binding dehydrogenase D5R55_RS22205 PF08240 Alcohol dehydrogenase GroES-like domain D5R55_RS22215 PF00248 Aldo/keto reductase family D5R55_RS22225 PF02653 Branched-chain amino acid transport system / permease component D5R55_RS22230 PF00005 ABC transporter D5R55_RS22235 PF00392 Bacterial regulatory proteins, gntR family D5R55_RS22235 PF07729 FCD domain D5R55_RS22240 PF07715 TonB-dependent Receptor Plug Domain D5R55_RS22240 PF00593 TonB dependent receptor D5R55_RS22245 PF03600 Citrate transporter D5R55_RS22245 PF02080 TrkA-C domain D5R55_RS22250 PF07690 Major Facilitator Superfamily D5R55_RS22265 PF00072 Response regulator receiver domain D5R55_RS22265 PF00158 Sigma-54 interaction domain D5R55_RS22265 PF02954 Bacterial regulatory protein, Fis family D5R55_RS22270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS22270 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS22275 PF05426 Alginate lyase D5R55_RS22285 PF02653 Branched-chain amino acid transport system / permease component D5R55_RS22290 PF00005 ABC transporter D5R55_RS22295 PF13407 Periplasmic binding protein domain D5R55_RS22300 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D5R55_RS22300 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D5R55_RS22315 PF12833 Helix-turn-helix domain D5R55_RS22320 PF01263 Aldose 1-epimerase D5R55_RS22330 PF00582 Universal stress protein family D5R55_RS22340 PF00196 Bacterial regulatory proteins, luxR family D5R55_RS22340 PF00072 Response regulator receiver domain D5R55_RS22345 PF00027 Cyclic nucleotide-binding domain D5R55_RS22345 PF13545 Crp-like helix-turn-helix domain D5R55_RS22350 PF08240 Alcohol dehydrogenase GroES-like domain D5R55_RS22385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS22385 PF03466 LysR substrate binding domain D5R55_RS22395 PF12833 Helix-turn-helix domain D5R55_RS22395 PF12852 Cupin D5R55_RS22410 PF00005 ABC transporter D5R55_RS22420 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS22425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D5R55_RS22425 PF08028 Acyl-CoA dehydrogenase, C-terminal domain D5R55_RS22430 PF08028 Acyl-CoA dehydrogenase, C-terminal domain D5R55_RS22430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D5R55_RS22435 PF00296 Luciferase-like monooxygenase D5R55_RS22440 PF07690 Major Facilitator Superfamily D5R55_RS22445 PF09084 NMT1/THI5 like D5R55_RS22450 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS22455 PF00005 ABC transporter D5R55_RS22460 PF00561 alpha/beta hydrolase fold D5R55_RS22465 PF00376 MerR family regulatory protein D5R55_RS22465 PF09278 MerR, DNA binding D5R55_RS22480 PF05658 Head domain of trimeric autotransporter adhesin D5R55_RS22480 PF03895 YadA-like membrane anchor domain D5R55_RS22480 PF13018 Extended Signal Peptide of Type V secretion system D5R55_RS22480 PF05662 Coiled stalk of trimeric autotransporter adhesin D5R55_RS22480 PF05658 Head domain of trimeric autotransporter adhesin D5R55_RS22480 PF05662 Coiled stalk of trimeric autotransporter adhesin D5R55_RS22480 PF03895 YadA-like membrane anchor domain D5R55_RS22480 PF13018 Extended Signal Peptide of Type V secretion system D5R55_RS22490 PF00072 Response regulator receiver domain D5R55_RS22490 PF00990 Diguanylate cyclase, GGDEF domain D5R55_RS22495 PF00593 TonB dependent receptor D5R55_RS22495 PF07715 TonB-dependent Receptor Plug Domain D5R55_RS22515 PF07745 Glycosyl hydrolase family 53 D5R55_RS22520 PF07690 Major Facilitator Superfamily D5R55_RS22525 PF08532 Beta-galactosidase trimerisation domain D5R55_RS22525 PF02449 Beta-galactosidase D5R55_RS22525 PF08533 Beta-galactosidase C-terminal domain D5R55_RS22530 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS22535 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS22545 PF17912 MalK OB fold domain D5R55_RS22545 PF00005 ABC transporter D5R55_RS22550 PF00356 Bacterial regulatory proteins, lacI family D5R55_RS22560 PF14525 AraC-binding-like domain D5R55_RS22560 PF12833 Helix-turn-helix domain D5R55_RS22565 PF01738 Dienelactone hydrolase family D5R55_RS22580 PF01613 Flavin reductase like domain D5R55_RS22600 PF00437 Type II/IV secretion system protein D5R55_RS22630 PF00263 Bacterial type II and III secretion system protein D5R55_RS22630 PF13629 Pilus formation protein N terminal region D5R55_RS22630 PF04972 BON domain D5R55_RS22645 PF06750 Bacterial Peptidase A24 N-terminal domain D5R55_RS22645 PF01478 Type IV leader peptidase family D5R55_RS22680 PF00535 Glycosyl transferase family 2 D5R55_RS22710 PF03466 LysR substrate binding domain D5R55_RS22710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS22720 PF03466 LysR substrate binding domain D5R55_RS22720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS22725 PF00561 alpha/beta hydrolase fold D5R55_RS22730 PF00440 Bacterial regulatory proteins, tetR family D5R55_RS22745 PF03466 LysR substrate binding domain D5R55_RS22745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS22750 PF08546 Ketopantoate reductase PanE/ApbA C terminal D5R55_RS22750 PF02558 Ketopantoate reductase PanE/ApbA D5R55_RS22755 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D5R55_RS22760 PF01575 MaoC like domain D5R55_RS22765 PF02515 CoA-transferase family III D5R55_RS22770 PF01488 Shikimate / quinate 5-dehydrogenase D5R55_RS22770 PF08501 Shikimate dehydrogenase substrate binding domain D5R55_RS22770 PF18317 Shikimate 5'-dehydrogenase C-terminal domain D5R55_RS22775 PF07690 Major Facilitator Superfamily D5R55_RS22780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS22780 PF03466 LysR substrate binding domain D5R55_RS22800 PF00291 Pyridoxal-phosphate dependent enzyme D5R55_RS22815 PF03466 LysR substrate binding domain D5R55_RS22815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS22825 PF00106 short chain dehydrogenase D5R55_RS22835 PF00202 Aminotransferase class-III D5R55_RS22840 PF00120 Glutamine synthetase, catalytic domain D5R55_RS22845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS22845 PF03466 LysR substrate binding domain D5R55_RS22870 PF00005 ABC transporter D5R55_RS22875 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS22880 PF01425 Amidase D5R55_RS22885 PF00289 Biotin carboxylase, N-terminal domain D5R55_RS22885 PF00364 Biotin-requiring enzyme D5R55_RS22885 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D5R55_RS22885 PF18140 Propionyl-coenzyme A carboxylase BT domain D5R55_RS22885 PF02785 Biotin carboxylase C-terminal domain D5R55_RS22915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D5R55_RS22920 PF00873 AcrB/AcrD/AcrF family D5R55_RS22930 PF04403 Paraquat-inducible protein A D5R55_RS22935 PF02470 MlaD protein D5R55_RS22945 PF16925 Tetracyclin repressor-like, C-terminal domain D5R55_RS22945 PF00440 Bacterial regulatory proteins, tetR family D5R55_RS22950 PF01494 FAD binding domain D5R55_RS22960 PF01557 Fumarylacetoacetate (FAA) hydrolase family D5R55_RS22965 PF13193 AMP-binding enzyme C-terminal domain D5R55_RS22965 PF00501 AMP-binding enzyme D5R55_RS22975 PF00440 Bacterial regulatory proteins, tetR family D5R55_RS23005 PF06441 Epoxide hydrolase N terminus D5R55_RS23015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS23015 PF03466 LysR substrate binding domain D5R55_RS23045 PF03466 LysR substrate binding domain D5R55_RS23045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS23055 PF00672 HAMP domain D5R55_RS23055 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS23055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS23065 PF00990 Diguanylate cyclase, GGDEF domain D5R55_RS23065 PF03707 Bacterial signalling protein N terminal repeat D5R55_RS23065 PF00563 EAL domain D5R55_RS23070 PF00158 Sigma-54 interaction domain D5R55_RS23070 PF00072 Response regulator receiver domain D5R55_RS23070 PF02954 Bacterial regulatory protein, Fis family D5R55_RS23095 PF00375 Sodium:dicarboxylate symporter family D5R55_RS23110 PF13609 Gram-negative porin D5R55_RS23115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS23115 PF03466 LysR substrate binding domain D5R55_RS23125 PF02558 Ketopantoate reductase PanE/ApbA D5R55_RS23125 PF08546 Ketopantoate reductase PanE/ApbA C terminal D5R55_RS23130 PF09828 Chromate resistance exported protein D5R55_RS23135 PF02417 Chromate transporter D5R55_RS23140 PF09828 Chromate resistance exported protein D5R55_RS23160 PF01165 Ribosomal protein S21 D5R55_RS23185 PF00375 Sodium:dicarboxylate symporter family D5R55_RS23220 PF00701 Dihydrodipicolinate synthetase family D5R55_RS23240 PF00375 Sodium:dicarboxylate symporter family D5R55_RS23250 PF17755 UvrA DNA-binding domain D5R55_RS23250 PF17760 UvrA interaction domain D5R55_RS23250 PF00005 ABC transporter D5R55_RS23260 PF00072 Response regulator receiver domain D5R55_RS23260 PF00486 Transcriptional regulatory protein, C terminal D5R55_RS23270 PF03707 Bacterial signalling protein N terminal repeat D5R55_RS23270 PF00990 Diguanylate cyclase, GGDEF domain D5R55_RS23270 PF00563 EAL domain D5R55_RS23275 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D5R55_RS23275 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D5R55_RS23285 PF02801 Beta-ketoacyl synthase, C-terminal domain D5R55_RS23285 PF00109 Beta-ketoacyl synthase, N-terminal domain D5R55_RS23285 PF16197 Ketoacyl-synthetase C-terminal extension D5R55_RS23285 PF00698 Acyl transferase domain D5R55_RS23285 PF08240 Alcohol dehydrogenase GroES-like domain D5R55_RS23285 PF08659 KR domain D5R55_RS23285 PF00550 Phosphopantetheine attachment site D5R55_RS23285 PF14765 Polyketide synthase dehydratase D5R55_RS23290 PF08240 Alcohol dehydrogenase GroES-like domain D5R55_RS23290 PF00107 Zinc-binding dehydrogenase D5R55_RS23305 PF01575 MaoC like domain D5R55_RS23310 PF01177 Asp/Glu/Hydantoin racemase D5R55_RS23315 PF00375 Sodium:dicarboxylate symporter family D5R55_RS23320 PF03466 LysR substrate binding domain D5R55_RS23320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS23325 PF12843 Putative quorum-sensing-regulated virulence factor D5R55_RS23335 PF00691 OmpA family D5R55_RS23340 PF05662 Coiled stalk of trimeric autotransporter adhesin D5R55_RS23340 PF05658 Head domain of trimeric autotransporter adhesin D5R55_RS23340 PF03895 YadA-like membrane anchor domain D5R55_RS23340 PF05662 Coiled stalk of trimeric autotransporter adhesin D5R55_RS23340 PF13018 Extended Signal Peptide of Type V secretion system D5R55_RS23340 PF05658 Head domain of trimeric autotransporter adhesin D5R55_RS23340 PF13018 Extended Signal Peptide of Type V secretion system D5R55_RS23340 PF03895 YadA-like membrane anchor domain D5R55_RS23350 PF00072 Response regulator receiver domain D5R55_RS23355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS23355 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS23355 PF00989 PAS fold D5R55_RS23355 PF00072 Response regulator receiver domain D5R55_RS23355 PF01627 Hpt domain D5R55_RS23355 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5R55_RS23365 PF02653 Branched-chain amino acid transport system / permease component D5R55_RS23370 PF02653 Branched-chain amino acid transport system / permease component D5R55_RS23375 PF00005 ABC transporter D5R55_RS23380 PF13407 Periplasmic binding protein domain D5R55_RS23390 PF02525 Flavodoxin-like fold D5R55_RS23395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS23395 PF03466 LysR substrate binding domain D5R55_RS23410 PF00483 Nucleotidyl transferase D5R55_RS23430 PF01380 SIS domain D5R55_RS23430 PF00571 CBS domain D5R55_RS23435 PF02348 Cytidylyltransferase D5R55_RS23445 PF00793 DAHP synthetase I family D5R55_RS23450 PF00534 Glycosyl transferases group 1 D5R55_RS23450 PF13439 Glycosyltransferase Family 4 D5R55_RS23460 PF00132 Bacterial transferase hexapeptide (six repeats) D5R55_RS23465 PF05159 Capsule polysaccharide biosynthesis protein D5R55_RS23475 PF02706 Chain length determinant protein D5R55_RS23475 PF13807 G-rich domain on putative tyrosine kinase D5R55_RS23475 PF13614 AAA domain D5R55_RS23480 PF01451 Low molecular weight phosphotyrosine protein phosphatase D5R55_RS23485 PF02563 Polysaccharide biosynthesis/export protein D5R55_RS23485 PF10531 SLBB domain D5R55_RS23490 PF02397 Bacterial sugar transferase D5R55_RS23505 PF00561 alpha/beta hydrolase fold D5R55_RS23505 PF08386 TAP-like protein D5R55_RS23510 PF03466 LysR substrate binding domain D5R55_RS23510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS23535 PF00501 AMP-binding enzyme D5R55_RS23540 PF00005 ABC transporter D5R55_RS23545 PF02687 FtsX-like permease family D5R55_RS23545 PF12704 MacB-like periplasmic core domain D5R55_RS23595 PF13193 AMP-binding enzyme C-terminal domain D5R55_RS23595 PF00501 AMP-binding enzyme D5R55_RS23605 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D5R55_RS23605 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D5R55_RS23605 PF12806 Acetyl-CoA dehydrogenase C-terminal like D5R55_RS23605 PF02770 Acyl-CoA dehydrogenase, middle domain D5R55_RS23615 PF01209 ubiE/COQ5 methyltransferase family D5R55_RS23620 PF02668 Taurine catabolism dioxygenase TauD, TfdA family D5R55_RS23625 PF03459 TOBE domain D5R55_RS23625 PF00005 ABC transporter D5R55_RS23655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5R55_RS23655 PF00672 HAMP domain D5R55_RS23655 PF02203 Tar ligand binding domain homologue D5R55_RS23660 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D5R55_RS23665 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D5R55_RS23670 PF03480 Bacterial extracellular solute-binding protein, family 7 D5R55_RS23685 PF00486 Transcriptional regulatory protein, C terminal D5R55_RS23685 PF00072 Response regulator receiver domain D5R55_RS23715 PF02979 Nitrile hydratase, alpha chain D5R55_RS23720 PF02211 Nitrile hydratase beta subunit D5R55_RS23725 PF02492 CobW/HypB/UreG, nucleotide-binding domain D5R55_RS23725 PF07683 Cobalamin synthesis protein cobW C-terminal domain D5R55_RS23730 PF01810 LysE type translocator D5R55_RS23740 PF00106 short chain dehydrogenase D5R55_RS23755 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D5R55_RS23765 PF00356 Bacterial regulatory proteins, lacI family D5R55_RS23765 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D5R55_RS23770 PF02435 Levansucrase/Invertase D5R55_RS23775 PF00251 Glycosyl hydrolases family 32 N-terminal domain D5R55_RS23775 PF08244 Glycosyl hydrolases family 32 C terminal D5R55_RS23785 PF03466 LysR substrate binding domain D5R55_RS23785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS23790 PF00083 Sugar (and other) transporter D5R55_RS23790 PF08946 Osmosensory transporter coiled coil D5R55_RS23795 PF02558 Ketopantoate reductase PanE/ApbA D5R55_RS23795 PF08546 Ketopantoate reductase PanE/ApbA C terminal D5R55_RS23800 PF06628 Catalase-related immune-responsive D5R55_RS23800 PF00199 Catalase D5R55_RS23810 PF04542 Sigma-70 region 2 D5R55_RS23810 PF08281 Sigma-70, region 4 D5R55_RS23815 PF02566 OsmC-like protein D5R55_RS23830 PF03358 NADPH-dependent FMN reductase D5R55_RS23835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS23835 PF07689 KaiB domain D5R55_RS23835 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS23840 PF00072 Response regulator receiver domain D5R55_RS23840 PF00196 Bacterial regulatory proteins, luxR family D5R55_RS23845 PF00196 Bacterial regulatory proteins, luxR family D5R55_RS23845 PF00072 Response regulator receiver domain D5R55_RS23875 PF00989 PAS fold D5R55_RS23875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS23875 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS23880 PF17938 Tetracyclin repressor-like, C-terminal domain D5R55_RS23880 PF00440 Bacterial regulatory proteins, tetR family D5R55_RS23890 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D5R55_RS23890 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain D5R55_RS23895 PF07690 Major Facilitator Superfamily D5R55_RS23900 PF00155 Aminotransferase class I and II D5R55_RS23900 PF00392 Bacterial regulatory proteins, gntR family D5R55_RS23905 PF02627 Carboxymuconolactone decarboxylase family D5R55_RS23915 PF00440 Bacterial regulatory proteins, tetR family D5R55_RS23915 PF17932 Tetracyclin repressor-like, C-terminal domain D5R55_RS23925 PF00005 ABC transporter D5R55_RS23935 PF02321 Outer membrane efflux protein D5R55_RS23940 PF13609 Gram-negative porin D5R55_RS23950 PF03009 Glycerophosphoryl diester phosphodiesterase family D5R55_RS23960 PF05995 Cysteine dioxygenase type I D5R55_RS23965 PF03466 LysR substrate binding domain D5R55_RS23965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS23970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D5R55_RS23970 PF08028 Acyl-CoA dehydrogenase, C-terminal domain D5R55_RS23970 PF02770 Acyl-CoA dehydrogenase, middle domain D5R55_RS23975 PF00296 Luciferase-like monooxygenase D5R55_RS23980 PF00596 Class II Aldolase and Adducin N-terminal domain D5R55_RS23985 PF09084 NMT1/THI5 like D5R55_RS23995 PF00005 ABC transporter D5R55_RS24015 PF08521 Two-component sensor kinase N-terminal D5R55_RS24015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS24015 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS24020 PF00072 Response regulator receiver domain D5R55_RS24020 PF00486 Transcriptional regulatory protein, C terminal D5R55_RS24025 PF07690 Major Facilitator Superfamily D5R55_RS24030 PF00392 Bacterial regulatory proteins, gntR family D5R55_RS24030 PF00155 Aminotransferase class I and II D5R55_RS24045 PF00005 ABC transporter D5R55_RS24045 PF08402 TOBE domain D5R55_RS24050 PF13609 Gram-negative porin D5R55_RS24055 PF00107 Zinc-binding dehydrogenase D5R55_RS24055 PF08240 Alcohol dehydrogenase GroES-like domain D5R55_RS24065 PF02311 AraC-like ligand binding domain D5R55_RS24065 PF12833 Helix-turn-helix domain D5R55_RS24070 PF03328 HpcH/HpaI aldolase/citrate lyase family D5R55_RS24075 PF01557 Fumarylacetoacetate (FAA) hydrolase family D5R55_RS24080 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase D5R55_RS24085 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase D5R55_RS24090 PF00171 Aldehyde dehydrogenase family D5R55_RS24095 PF01557 Fumarylacetoacetate (FAA) hydrolase family D5R55_RS24100 PF01557 Fumarylacetoacetate (FAA) hydrolase family D5R55_RS24105 PF01047 MarR family D5R55_RS24120 PF03717 Penicillin-binding Protein dimerisation domain D5R55_RS24120 PF00905 Penicillin binding protein transpeptidase domain D5R55_RS24125 PF02254 TrkA-N domain D5R55_RS24125 PF00999 Sodium/hydrogen exchanger family D5R55_RS24130 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D5R55_RS24130 PF00034 Cytochrome c D5R55_RS24135 PF00732 GMC oxidoreductase D5R55_RS24135 PF05199 GMC oxidoreductase D5R55_RS24140 PF13618 Gluconate 2-dehydrogenase subunit 3 D5R55_RS24160 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D5R55_RS24160 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D5R55_RS24165 PF02811 PHP domain D5R55_RS24165 PF14716 Helix-hairpin-helix domain D5R55_RS24165 PF14791 DNA polymerase beta thumb D5R55_RS24175 PF00534 Glycosyl transferases group 1 D5R55_RS24175 PF13439 Glycosyltransferase Family 4 D5R55_RS24180 PF02397 Bacterial sugar transferase D5R55_RS24195 PF00550 Phosphopantetheine attachment site D5R55_RS24220 PF00158 Sigma-54 interaction domain D5R55_RS24220 PF02954 Bacterial regulatory protein, Fis family D5R55_RS24220 PF06490 Flagellar regulatory protein FleQ D5R55_RS24225 PF13439 Glycosyltransferase Family 4 D5R55_RS24225 PF00534 Glycosyl transferases group 1 D5R55_RS24235 PF01050 Mannose-6-phosphate isomerase D5R55_RS24235 PF00483 Nucleotidyl transferase D5R55_RS24255 PF02706 Chain length determinant protein D5R55_RS24255 PF13807 G-rich domain on putative tyrosine kinase D5R55_RS24255 PF13614 AAA domain D5R55_RS24260 PF10531 SLBB domain D5R55_RS24260 PF02563 Polysaccharide biosynthesis/export protein D5R55_RS24290 PF01915 Glycosyl hydrolase family 3 C-terminal domain D5R55_RS24290 PF00933 Glycosyl hydrolase family 3 N terminal domain D5R55_RS24290 PF14310 Fibronectin type III-like domain D5R55_RS24300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS24300 PF03466 LysR substrate binding domain D5R55_RS24305 PF01205 Uncharacterized protein family UPF0029 D5R55_RS24305 PF09186 Domain of unknown function (DUF1949) D5R55_RS24315 PF03976 Polyphosphate kinase 2 (PPK2) D5R55_RS24335 PF00270 DEAD/DEAH box helicase D5R55_RS24335 PF00271 Helicase conserved C-terminal domain D5R55_RS24335 PF08494 DEAD/H associated D5R55_RS24340 PF13520 Amino acid permease D5R55_RS24355 PF00529 HlyD membrane-fusion protein of T1SS D5R55_RS24355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D5R55_RS24360 PF00664 ABC transporter transmembrane region D5R55_RS24360 PF00005 ABC transporter D5R55_RS24365 PF02321 Outer membrane efflux protein D5R55_RS24380 PF03466 LysR substrate binding domain D5R55_RS24380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS24395 PF00775 Dioxygenase D5R55_RS24395 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal D5R55_RS24425 PF03576 Peptidase family S58 D5R55_RS24430 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS24430 PF12911 N-terminal TM domain of oligopeptide transport permease C D5R55_RS24435 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS24440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D5R55_RS24445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D5R55_RS24445 PF00005 ABC transporter D5R55_RS24450 PF01112 Asparaginase D5R55_RS24460 PF07690 Major Facilitator Superfamily D5R55_RS24465 PF01055 Glycosyl hydrolases family 31 D5R55_RS24465 PF16338 Domain of unknown function (DUF4968) D5R55_RS24465 PF17137 Domain of unknown function (DUF5110) D5R55_RS24465 PF13802 Galactose mutarotase-like D5R55_RS24470 PF13609 Gram-negative porin D5R55_RS24480 PF08241 Methyltransferase domain D5R55_RS24505 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5R55_RS24505 PF04324 BFD-like [2Fe-2S] binding domain D5R55_RS24515 PF01266 FAD dependent oxidoreductase D5R55_RS24520 PF05544 Proline racemase D5R55_RS24525 PF00701 Dihydrodipicolinate synthetase family D5R55_RS24530 PF13520 Amino acid permease D5R55_RS24535 PF00171 Aldehyde dehydrogenase family D5R55_RS24540 PF02615 Malate/L-lactate dehydrogenase D5R55_RS24550 PF00920 Dehydratase family D5R55_RS24565 PF03979 Sigma-70 factor, region 1.1 D5R55_RS24565 PF04546 Sigma-70, non-essential region D5R55_RS24565 PF04539 Sigma-70 region 3 D5R55_RS24565 PF04542 Sigma-70 region 2 D5R55_RS24565 PF04545 Sigma-70, region 4 D5R55_RS24565 PF00140 Sigma-70 factor, region 1.2 D5R55_RS24575 PF09278 MerR, DNA binding D5R55_RS24575 PF00376 MerR family regulatory protein D5R55_RS24585 PF07690 Major Facilitator Superfamily D5R55_RS24590 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain D5R55_RS24590 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain D5R55_RS24625 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D5R55_RS24625 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D5R55_RS24630 PF00266 Aminotransferase class-V D5R55_RS24640 PF05860 haemagglutination activity domain D5R55_RS24645 PF08479 POTRA domain, ShlB-type D5R55_RS24645 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB D5R55_RS24665 PF01757 Acyltransferase family D5R55_RS24670 PF00561 alpha/beta hydrolase fold D5R55_RS24690 PF01841 Transglutaminase-like superfamily D5R55_RS24690 PF08379 Bacterial transglutaminase-like N-terminal region D5R55_RS24695 PF04168 A predicted alpha-helical domain with a conserved ER motif. D5R55_RS24695 PF14403 Circularly permuted ATP-grasp type 2 D5R55_RS24710 PF04168 A predicted alpha-helical domain with a conserved ER motif. D5R55_RS24710 PF14403 Circularly permuted ATP-grasp type 2 D5R55_RS24715 PF14403 Circularly permuted ATP-grasp type 2 D5R55_RS24725 PF03466 LysR substrate binding domain D5R55_RS24725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS24750 PF14883 Hypothetical glycosyl hydrolase family 13 D5R55_RS24750 PF01522 Polysaccharide deacetylase D5R55_RS24755 PF00535 Glycosyl transferase family 2 D5R55_RS24765 PF01380 SIS domain D5R55_RS24780 PF07687 Peptidase dimerisation domain D5R55_RS24780 PF01546 Peptidase family M20/M25/M40 D5R55_RS24790 PF13458 Periplasmic binding protein D5R55_RS24795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS24795 PF03466 LysR substrate binding domain D5R55_RS24800 PF00578 AhpC/TSA family D5R55_RS24800 PF10417 C-terminal domain of 1-Cys peroxiredoxin D5R55_RS24805 PF13192 Thioredoxin domain D5R55_RS24805 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5R55_RS24820 PF00202 Aminotransferase class-III D5R55_RS24830 PF00005 ABC transporter D5R55_RS24835 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS24840 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5R55_RS24845 PF00664 ABC transporter transmembrane region D5R55_RS24845 PF00005 ABC transporter D5R55_RS24850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS24850 PF03466 LysR substrate binding domain D5R55_RS24865 PF01168 Alanine racemase, N-terminal domain D5R55_RS24865 PF00842 Alanine racemase, C-terminal domain D5R55_RS24870 PF00378 Enoyl-CoA hydratase/isomerase D5R55_RS24875 PF07690 Major Facilitator Superfamily D5R55_RS24895 PF00072 Response regulator receiver domain D5R55_RS24910 PF00672 HAMP domain D5R55_RS24910 PF16591 Helical bimodular sensor domain D5R55_RS24910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5R55_RS24915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS24915 PF01627 Hpt domain D5R55_RS24915 PF00072 Response regulator receiver domain D5R55_RS24915 PF01584 CheW-like domain D5R55_RS24925 PF01738 Dienelactone hydrolase family D5R55_RS24930 PF00324 Amino acid permease D5R55_RS24935 PF00206 Lyase D5R55_RS24935 PF10415 Fumarase C C-terminus D5R55_RS24940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS24940 PF03466 LysR substrate binding domain D5R55_RS24975 PF01339 CheB methylesterase D5R55_RS24975 PF00072 Response regulator receiver domain D5R55_RS24980 PF00990 Diguanylate cyclase, GGDEF domain D5R55_RS24980 PF01590 GAF domain D5R55_RS24980 PF00563 EAL domain D5R55_RS24980 PF00360 Phytochrome region D5R55_RS24985 PF00990 Diguanylate cyclase, GGDEF domain D5R55_RS24985 PF03707 Bacterial signalling protein N terminal repeat D5R55_RS24985 PF00563 EAL domain D5R55_RS24990 PF03466 LysR substrate binding domain D5R55_RS24990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS25015 PF07690 Major Facilitator Superfamily D5R55_RS25015 PF00083 Sugar (and other) transporter D5R55_RS25025 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D5R55_RS25025 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D5R55_RS25070 PF07690 Major Facilitator Superfamily D5R55_RS25075 PF03466 LysR substrate binding domain D5R55_RS25075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS25080 PF09084 NMT1/THI5 like D5R55_RS25090 PF00535 Glycosyl transferase family 2 D5R55_RS25105 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS25110 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS25115 PF00005 ABC transporter D5R55_RS25120 PF02668 Taurine catabolism dioxygenase TauD, TfdA family D5R55_RS25125 PF02668 Taurine catabolism dioxygenase TauD, TfdA family D5R55_RS25130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D5R55_RS25140 PF09084 NMT1/THI5 like D5R55_RS25150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS25150 PF03466 LysR substrate binding domain D5R55_RS25155 PF13520 Amino acid permease D5R55_RS25160 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain D5R55_RS25160 PF01276 Orn/Lys/Arg decarboxylase, major domain D5R55_RS25160 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain D5R55_RS25170 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain D5R55_RS25170 PF01276 Orn/Lys/Arg decarboxylase, major domain D5R55_RS25170 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain D5R55_RS25180 PF00465 Iron-containing alcohol dehydrogenase D5R55_RS25190 PF00106 short chain dehydrogenase D5R55_RS25195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS25195 PF03466 LysR substrate binding domain D5R55_RS25200 PF00860 Permease family D5R55_RS25205 PF00293 NUDIX domain D5R55_RS25220 PF00182 Chitinase class I D5R55_RS25240 PF05922 Peptidase inhibitor I9 D5R55_RS25240 PF00082 Subtilase family D5R55_RS25250 PF00196 Bacterial regulatory proteins, luxR family D5R55_RS25250 PF00072 Response regulator receiver domain D5R55_RS25260 PF02780 Transketolase, C-terminal domain D5R55_RS25260 PF02779 Transketolase, pyrimidine binding domain D5R55_RS25260 PF00456 Transketolase, thiamine diphosphate binding domain D5R55_RS25270 PF00196 Bacterial regulatory proteins, luxR family D5R55_RS25270 PF00072 Response regulator receiver domain D5R55_RS25275 PF00005 ABC transporter D5R55_RS25280 PF00005 ABC transporter D5R55_RS25280 PF12399 Branched-chain amino acid ATP-binding cassette transporter D5R55_RS25285 PF02653 Branched-chain amino acid transport system / permease component D5R55_RS25290 PF13458 Periplasmic binding protein D5R55_RS25295 PF01425 Amidase D5R55_RS25300 PF07690 Major Facilitator Superfamily D5R55_RS25305 PF00795 Carbon-nitrogen hydrolase D5R55_RS25315 PF01070 FMN-dependent dehydrogenase D5R55_RS25320 PF07690 Major Facilitator Superfamily D5R55_RS25325 PF00171 Aldehyde dehydrogenase family D5R55_RS25330 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D5R55_RS25330 PF00205 Thiamine pyrophosphate enzyme, central domain D5R55_RS25330 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D5R55_RS25340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS25340 PF03466 LysR substrate binding domain D5R55_RS25345 PF12852 Cupin D5R55_RS25345 PF12833 Helix-turn-helix domain D5R55_RS25350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS25350 PF03466 LysR substrate binding domain D5R55_RS25355 PF07690 Major Facilitator Superfamily D5R55_RS25365 PF07519 Tannase and feruloyl esterase D5R55_RS25390 PF02874 ATP synthase alpha/beta family, beta-barrel domain D5R55_RS25390 PF18269 T3SS EscN ATPase C-terminal domain D5R55_RS25390 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D5R55_RS25405 PF01514 Secretory protein of YscJ/FliF family D5R55_RS25425 PF01312 FlhB HrpN YscU SpaS Family D5R55_RS25430 PF00771 FHIPEP family D5R55_RS25435 PF09483 Type III secretion protein (HpaP) D5R55_RS25440 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D5R55_RS25445 PF00813 FliP family D5R55_RS25450 PF01313 Bacterial export proteins, family 3 D5R55_RS25480 PF00263 Bacterial type II and III secretion system protein D5R55_RS25480 PF03958 Bacterial type II/III secretion system short domain D5R55_RS25485 PF00072 Response regulator receiver domain D5R55_RS25485 PF00486 Transcriptional regulatory protein, C terminal D5R55_RS25490 PF00672 HAMP domain D5R55_RS25490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS25490 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS25495 PF03958 Bacterial type II/III secretion system short domain D5R55_RS25495 PF00263 Bacterial type II and III secretion system protein D5R55_RS25500 PF00437 Type II/IV secretion system protein D5R55_RS25525 PF00437 Type II/IV secretion system protein D5R55_RS25540 PF00263 Bacterial type II and III secretion system protein D5R55_RS25540 PF07655 Secretin N-terminal domain D5R55_RS25560 PF01464 Transglycosylase SLT domain D5R55_RS25620 PF09106 Elongation factor SelB, winged helix D5R55_RS25620 PF09107 Elongation factor SelB, winged helix D5R55_RS25620 PF03144 Elongation factor Tu domain 2 D5R55_RS25620 PF00009 Elongation factor Tu GTP binding domain D5R55_RS25625 PF12390 Selenocysteine synthase N terminal D5R55_RS25625 PF03841 L-seryl-tRNA selenium transferase D5R55_RS25630 PF04216 Protein involved in formate dehydrogenase formation D5R55_RS25635 PF01292 Prokaryotic cytochrome b561 D5R55_RS25640 PF13247 4Fe-4S dicluster domain D5R55_RS25640 PF12800 4Fe-4S binding domain D5R55_RS25640 PF09163 Formate dehydrogenase N, transmembrane D5R55_RS25645 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D5R55_RS25645 PF00384 Molybdopterin oxidoreductase D5R55_RS25645 PF01568 Molydopterin dinucleotide binding domain D5R55_RS25650 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D5R55_RS25650 PF01568 Molydopterin dinucleotide binding domain D5R55_RS25650 PF00384 Molybdopterin oxidoreductase D5R55_RS25655 PF03631 Virulence factor BrkB D5R55_RS25660 PF13609 Gram-negative porin D5R55_RS25690 PF01757 Acyltransferase family D5R55_RS25695 PF00483 Nucleotidyl transferase D5R55_RS25700 PF01757 Acyltransferase family D5R55_RS25705 PF00534 Glycosyl transferases group 1 D5R55_RS25705 PF13439 Glycosyltransferase Family 4 D5R55_RS25710 PF01943 Polysaccharide biosynthesis protein D5R55_RS25710 PF14667 Polysaccharide biosynthesis C-terminal domain D5R55_RS25720 PF01757 Acyltransferase family D5R55_RS25725 PF16363 GDP-mannose 4,6 dehydratase D5R55_RS25735 PF01053 Cys/Met metabolism PLP-dependent enzyme D5R55_RS25740 PF00156 Phosphoribosyl transferase domain D5R55_RS25755 PF02875 Mur ligase family, glutamate ligase domain D5R55_RS25755 PF08245 Mur ligase middle domain D5R55_RS25760 PF17848 Acetyl-coA carboxylase zinc finger domain D5R55_RS25760 PF01039 Carboxyl transferase domain D5R55_RS25765 PF00290 Tryptophan synthase alpha chain D5R55_RS25770 PF01555 DNA methylase D5R55_RS25775 PF00291 Pyridoxal-phosphate dependent enzyme D5R55_RS25780 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase D5R55_RS25785 PF01416 tRNA pseudouridine synthase D5R55_RS25795 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D5R55_RS25795 PF00460 Flagella basal body rod protein D5R55_RS25795 PF07559 Flagellar basal body protein FlaE D5R55_RS25800 PF02774 Semialdehyde dehydrogenase, dimerisation domain D5R55_RS25800 PF01118 Semialdehyde dehydrogenase, NAD binding domain D5R55_RS25810 PF00180 Isocitrate/isopropylmalate dehydrogenase D5R55_RS25815 PF00694 Aconitase C-terminal domain D5R55_RS25825 PF00330 Aconitase family (aconitate hydratase) D5R55_RS25850 PF00324 Amino acid permease D5R55_RS25855 PF01037 Lrp/AsnC ligand binding domain D5R55_RS25865 PF07350 Protein of unknown function (DUF1479) D5R55_RS25875 PF12833 Helix-turn-helix domain D5R55_RS25880 PF00285 Citrate synthase, C-terminal domain D5R55_RS25885 PF03937 Flavinator of succinate dehydrogenase D5R55_RS25890 PF13085 2Fe-2S iron-sulfur cluster binding domain D5R55_RS25895 PF00890 FAD binding domain D5R55_RS25895 PF02910 Fumarate reductase flavoprotein C-term D5R55_RS25905 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D5R55_RS25910 PF07702 UTRA domain D5R55_RS25910 PF00392 Bacterial regulatory proteins, gntR family D5R55_RS25915 PF00056 lactate/malate dehydrogenase, NAD binding domain D5R55_RS25915 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain D5R55_RS25930 PF03972 MmgE/PrpD family D5R55_RS25935 PF00694 Aconitase C-terminal domain D5R55_RS25935 PF00330 Aconitase family (aconitate hydratase) D5R55_RS25950 PF04493 Endonuclease V D5R55_RS25980 PF04717 Type VI secretion system, phage-baseplate injector D5R55_RS25980 PF13296 Putative type VI secretion system Rhs element Vgr D5R55_RS25980 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) D5R55_RS25995 PF00082 Subtilase family D5R55_RS25995 PF09286 Pro-kumamolisin, activation domain D5R55_RS26015 PF07690 Major Facilitator Superfamily D5R55_RS26020 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS26025 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS26035 PF00005 ABC transporter D5R55_RS26035 PF08402 TOBE domain D5R55_RS26040 PF00392 Bacterial regulatory proteins, gntR family D5R55_RS26040 PF00155 Aminotransferase class I and II D5R55_RS26045 PF03280 Proteobacterial lipase chaperone protein D5R55_RS26050 PF00561 alpha/beta hydrolase fold D5R55_RS26055 PF07715 TonB-dependent Receptor Plug Domain D5R55_RS26055 PF00593 TonB dependent receptor D5R55_RS26070 PF01292 Prokaryotic cytochrome b561 D5R55_RS26080 PF01551 Peptidase family M23 D5R55_RS26080 PF01476 LysM domain D5R55_RS26095 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D5R55_RS26095 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain D5R55_RS26120 PF00924 Mechanosensitive ion channel D5R55_RS26125 PF00440 Bacterial regulatory proteins, tetR family D5R55_RS26130 PF13533 Biotin-lipoyl like D5R55_RS26135 PF07690 Major Facilitator Superfamily D5R55_RS26140 PF02321 Outer membrane efflux protein D5R55_RS26145 PF00199 Catalase D5R55_RS26145 PF06628 Catalase-related immune-responsive D5R55_RS26155 PF00529 HlyD membrane-fusion protein of T1SS D5R55_RS26155 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D5R55_RS26160 PF00873 AcrB/AcrD/AcrF family D5R55_RS26165 PF02321 Outer membrane efflux protein D5R55_RS26170 PF00486 Transcriptional regulatory protein, C terminal D5R55_RS26170 PF00072 Response regulator receiver domain D5R55_RS26185 PF09286 Pro-kumamolisin, activation domain D5R55_RS26185 PF00082 Subtilase family D5R55_RS26195 PF00392 Bacterial regulatory proteins, gntR family D5R55_RS26195 PF00155 Aminotransferase class I and II D5R55_RS26200 PF13091 PLD-like domain D5R55_RS26210 PF04545 Sigma-70, region 4 D5R55_RS26210 PF04542 Sigma-70 region 2 D5R55_RS26210 PF04539 Sigma-70 region 3 D5R55_RS26210 PF04546 Sigma-70, non-essential region D5R55_RS26210 PF00140 Sigma-70 factor, region 1.2 D5R55_RS26210 PF03979 Sigma-70 factor, region 1.1 D5R55_RS26215 PF08275 DNA primase catalytic core, N-terminal domain D5R55_RS26215 PF10410 DnaB-helicase binding domain of primase D5R55_RS26215 PF01807 CHC2 zinc finger D5R55_RS26215 PF08278 DNA primase DnaG DnaB-binding D5R55_RS26225 PF01165 Ribosomal protein S21 D5R55_RS26235 PF00814 Glycoprotease family D5R55_RS26240 PF02649 Type I GTP cyclohydrolase folE2 D5R55_RS26245 PF13292 1-deoxy-D-xylulose-5-phosphate synthase D5R55_RS26245 PF02780 Transketolase, C-terminal domain D5R55_RS26245 PF02779 Transketolase, pyrimidine binding domain D5R55_RS26250 PF00348 Polyprenyl synthetase D5R55_RS26255 PF02609 Exonuclease VII small subunit D5R55_RS26265 PF00581 Rhodanese-like domain D5R55_RS26270 PF01738 Dienelactone hydrolase family D5R55_RS26280 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5R55_RS26285 PF00476 DNA polymerase family A D5R55_RS26285 PF01612 3'-5' exonuclease D5R55_RS26285 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D5R55_RS26285 PF01367 5'-3' exonuclease, C-terminal SAM fold D5R55_RS26290 PF03641 Possible lysine decarboxylase D5R55_RS26300 PF01048 Phosphorylase superfamily D5R55_RS26300 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus D5R55_RS26310 PF01636 Phosphotransferase enzyme family D5R55_RS26320 PF01047 MarR family D5R55_RS26325 PF02566 OsmC-like protein D5R55_RS26340 PF01569 PAP2 superfamily D5R55_RS26350 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS26355 PF08402 TOBE domain D5R55_RS26355 PF00005 ABC transporter D5R55_RS26360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS26360 PF03459 TOBE domain D5R55_RS26370 PF14552 Tautomerase enzyme D5R55_RS26375 PF03466 LysR substrate binding domain D5R55_RS26375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS26390 PF03471 Transporter associated domain D5R55_RS26390 PF00571 CBS domain D5R55_RS26390 PF01595 Cyclin M transmembrane N-terminal domain D5R55_RS26395 PF02581 Thiamine monophosphate synthase D5R55_RS26400 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D5R55_RS26400 PF02806 Alpha amylase, C-terminal all-beta domain D5R55_RS26400 PF00128 Alpha amylase, catalytic domain D5R55_RS26420 PF00149 Calcineurin-like phosphoesterase D5R55_RS26430 PF09722 Protein of unknown function (DUF2384) D5R55_RS26435 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5R55_RS26455 PF02954 Bacterial regulatory protein, Fis family D5R55_RS26455 PF00158 Sigma-54 interaction domain D5R55_RS26455 PF00072 Response regulator receiver domain D5R55_RS26465 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D5R55_RS26470 PF12833 Helix-turn-helix domain D5R55_RS26475 PF07690 Major Facilitator Superfamily D5R55_RS26480 PF01638 HxlR-like helix-turn-helix D5R55_RS26485 PF07690 Major Facilitator Superfamily D5R55_RS26495 PF13439 Glycosyltransferase Family 4 D5R55_RS26500 PF00534 Glycosyl transferases group 1 D5R55_RS26500 PF13439 Glycosyltransferase Family 4 D5R55_RS26520 PF13807 G-rich domain on putative tyrosine kinase D5R55_RS26520 PF13614 AAA domain D5R55_RS26520 PF02706 Chain length determinant protein D5R55_RS26525 PF10531 SLBB domain D5R55_RS26525 PF02563 Polysaccharide biosynthesis/export protein D5R55_RS26525 PF18412 Outer-membrane lipoprotein Wza C-terminal domain D5R55_RS26530 PF01451 Low molecular weight phosphotyrosine protein phosphatase D5R55_RS26535 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D5R55_RS26535 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D5R55_RS26535 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D5R55_RS26540 PF02397 Bacterial sugar transferase D5R55_RS26545 PF00483 Nucleotidyl transferase D5R55_RS26545 PF01050 Mannose-6-phosphate isomerase D5R55_RS26560 PF13183 4Fe-4S dicluster domain D5R55_RS26560 PF02754 Cysteine-rich domain D5R55_RS26565 PF02915 Rubrerythrin D5R55_RS26570 PF04542 Sigma-70 region 2 D5R55_RS26570 PF08281 Sigma-70, region 4 D5R55_RS26580 PF03795 YCII-related domain D5R55_RS26585 PF03795 YCII-related domain D5R55_RS26605 PF01594 AI-2E family transporter D5R55_RS26615 PF16884 N-terminal domain of oxidoreductase D5R55_RS26615 PF00107 Zinc-binding dehydrogenase D5R55_RS26630 PF01566 Natural resistance-associated macrophage protein D5R55_RS26640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS26640 PF03466 LysR substrate binding domain D5R55_RS26650 PF04261 Dyp-type peroxidase family D5R55_RS26660 PF00664 ABC transporter transmembrane region D5R55_RS26660 PF00005 ABC transporter D5R55_RS26670 PF00677 Lumazine binding domain D5R55_RS26680 PF00654 Voltage gated chloride channel D5R55_RS26685 PF01339 CheB methylesterase D5R55_RS26685 PF00072 Response regulator receiver domain D5R55_RS26690 PF01584 CheW-like domain D5R55_RS26690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS26690 PF01627 Hpt domain D5R55_RS26690 PF00072 Response regulator receiver domain D5R55_RS26700 PF01739 CheR methyltransferase, SAM binding domain D5R55_RS26710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5R55_RS26710 PF02743 Cache domain D5R55_RS26710 PF00672 HAMP domain D5R55_RS26720 PF00486 Transcriptional regulatory protein, C terminal D5R55_RS26720 PF00072 Response regulator receiver domain D5R55_RS26725 PF00999 Sodium/hydrogen exchanger family D5R55_RS26730 PF00171 Aldehyde dehydrogenase family D5R55_RS26735 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D5R55_RS26735 PF00205 Thiamine pyrophosphate enzyme, central domain D5R55_RS26735 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D5R55_RS26745 PF05973 Phage derived protein Gp49-like (DUF891) D5R55_RS26750 PF01381 Helix-turn-helix D5R55_RS26760 PF01381 Helix-turn-helix D5R55_RS26765 PF04286 Protein of unknown function (DUF445) D5R55_RS26770 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5R55_RS26770 PF14759 Reductase C-terminal D5R55_RS26775 PF00355 Rieske [2Fe-2S] domain D5R55_RS26780 PF00866 Ring hydroxylating beta subunit D5R55_RS26785 PF00355 Rieske [2Fe-2S] domain D5R55_RS26785 PF00848 Ring hydroxylating alpha subunit (catalytic domain) D5R55_RS26790 PF12833 Helix-turn-helix domain D5R55_RS26790 PF14525 AraC-binding-like domain D5R55_RS26795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS26795 PF03466 LysR substrate binding domain D5R55_RS26800 PF13378 Enolase C-terminal domain-like D5R55_RS26800 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D5R55_RS26805 PF00775 Dioxygenase D5R55_RS26805 PF04444 Catechol dioxygenase N terminus D5R55_RS26810 PF02426 Muconolactone delta-isomerase D5R55_RS26820 PF02525 Flavodoxin-like fold D5R55_RS26825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS26825 PF03466 LysR substrate binding domain D5R55_RS26835 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5R55_RS26835 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D5R55_RS26860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS26860 PF03466 LysR substrate binding domain D5R55_RS26870 PF00529 HlyD membrane-fusion protein of T1SS D5R55_RS26870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D5R55_RS26875 PF07690 Major Facilitator Superfamily D5R55_RS26885 PF00563 EAL domain D5R55_RS26885 PF08668 HDOD domain D5R55_RS26890 PF00563 EAL domain D5R55_RS26890 PF00990 Diguanylate cyclase, GGDEF domain D5R55_RS26890 PF03707 Bacterial signalling protein N terminal repeat D5R55_RS26900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS26900 PF03466 LysR substrate binding domain D5R55_RS26905 PF07690 Major Facilitator Superfamily D5R55_RS26910 PF01979 Amidohydrolase family D5R55_RS26935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5R55_RS26935 PF02203 Tar ligand binding domain homologue D5R55_RS26935 PF00672 HAMP domain D5R55_RS26940 PF13677 Membrane MotB of proton-channel complex MotA/MotB D5R55_RS26940 PF00691 OmpA family D5R55_RS26945 PF01618 MotA/TolQ/ExbB proton channel family D5R55_RS26960 PF00561 alpha/beta hydrolase fold D5R55_RS26975 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D5R55_RS26980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS26980 PF03466 LysR substrate binding domain D5R55_RS26990 PF00557 Metallopeptidase family M24 D5R55_RS26995 PF00005 ABC transporter D5R55_RS27000 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS27005 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS27025 PF00392 Bacterial regulatory proteins, gntR family D5R55_RS27025 PF07702 UTRA domain D5R55_RS27030 PF03033 Glycosyltransferase family 28 N-terminal domain D5R55_RS27050 PF03466 LysR substrate binding domain D5R55_RS27050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS27060 PF00324 Amino acid permease D5R55_RS27065 PF00990 Diguanylate cyclase, GGDEF domain D5R55_RS27070 PF04632 Fusaric acid resistance protein family D5R55_RS27075 PF00764 Arginosuccinate synthase D5R55_RS27110 PF08479 POTRA domain, ShlB-type D5R55_RS27110 PF17287 POTRA domain D5R55_RS27110 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB D5R55_RS27115 PF05594 Haemagluttinin repeat D5R55_RS27115 PF05860 haemagglutination activity domain D5R55_RS27115 PF13332 Hemagglutinin repeat D5R55_RS27115 PF13018 Extended Signal Peptide of Type V secretion system D5R55_RS27125 PF07690 Major Facilitator Superfamily D5R55_RS27130 PF00180 Isocitrate/isopropylmalate dehydrogenase D5R55_RS27135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS27135 PF03466 LysR substrate binding domain D5R55_RS27140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS27140 PF03466 LysR substrate binding domain D5R55_RS27155 PF01810 LysE type translocator D5R55_RS27160 PF13649 Methyltransferase domain D5R55_RS27165 PF06956 Regulator of RNA terminal phosphate cyclase D5R55_RS27165 PF00158 Sigma-54 interaction domain D5R55_RS27180 PF01139 tRNA-splicing ligase RtcB D5R55_RS27195 PF01596 O-methyltransferase D5R55_RS27200 PF01053 Cys/Met metabolism PLP-dependent enzyme D5R55_RS27225 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS27225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS27225 PF00672 HAMP domain D5R55_RS27230 PF00486 Transcriptional regulatory protein, C terminal D5R55_RS27230 PF00072 Response regulator receiver domain D5R55_RS27235 PF00873 AcrB/AcrD/AcrF family D5R55_RS27240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D5R55_RS27240 PF00529 HlyD membrane-fusion protein of T1SS D5R55_RS27245 PF02321 Outer membrane efflux protein D5R55_RS27270 PF07715 TonB-dependent Receptor Plug Domain D5R55_RS27270 PF00593 TonB dependent receptor D5R55_RS27285 PF00175 Oxidoreductase NAD-binding domain D5R55_RS27285 PF00042 Globin D5R55_RS27285 PF00970 Oxidoreductase FAD-binding domain D5R55_RS27290 PF02798 Glutathione S-transferase, N-terminal domain D5R55_RS27295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS27295 PF03466 LysR substrate binding domain D5R55_RS27335 PF00106 short chain dehydrogenase D5R55_RS27340 PF00743 Flavin-binding monooxygenase-like D5R55_RS27345 PF00561 alpha/beta hydrolase fold D5R55_RS27350 PF02627 Carboxymuconolactone decarboxylase family D5R55_RS27365 PF07690 Major Facilitator Superfamily D5R55_RS27375 PF03358 NADPH-dependent FMN reductase D5R55_RS27385 PF00691 OmpA family D5R55_RS27400 PF00004 ATPase family associated with various cellular activities (AAA) D5R55_RS27400 PF17862 AAA+ lid domain D5R55_RS27400 PF01434 Peptidase family M41 D5R55_RS27400 PF06480 FtsH Extracellular D5R55_RS27420 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D5R55_RS27420 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5R55_RS27425 PF03466 LysR substrate binding domain D5R55_RS27425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS27430 PF00550 Phosphopantetheine attachment site D5R55_RS27430 PF00501 AMP-binding enzyme D5R55_RS27430 PF00668 Condensation domain D5R55_RS27430 PF07993 Male sterility protein D5R55_RS27430 PF13193 AMP-binding enzyme C-terminal domain D5R55_RS27460 PF01965 DJ-1/PfpI family D5R55_RS27470 PF01965 DJ-1/PfpI family D5R55_RS27490 PF00005 ABC transporter D5R55_RS27490 PF08402 TOBE domain D5R55_RS27495 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS27500 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS27510 PF04324 BFD-like [2Fe-2S] binding domain D5R55_RS27510 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5R55_RS27515 PF01266 FAD dependent oxidoreductase D5R55_RS27525 PF00083 Sugar (and other) transporter D5R55_RS27530 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D5R55_RS27530 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D5R55_RS27535 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus D5R55_RS27535 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus D5R55_RS27545 PF03466 LysR substrate binding domain D5R55_RS27545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS27550 PF13609 Gram-negative porin D5R55_RS27555 PF07690 Major Facilitator Superfamily D5R55_RS27560 PF00111 2Fe-2S iron-sulfur cluster binding domain D5R55_RS27560 PF00355 Rieske [2Fe-2S] domain D5R55_RS27565 PF03466 LysR substrate binding domain D5R55_RS27565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS27570 PF00848 Ring hydroxylating alpha subunit (catalytic domain) D5R55_RS27570 PF00355 Rieske [2Fe-2S] domain D5R55_RS27580 PF01361 Tautomerase enzyme D5R55_RS27585 PF00989 PAS fold D5R55_RS27585 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS27585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS27590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D5R55_RS27590 PF08028 Acyl-CoA dehydrogenase, C-terminal domain D5R55_RS27605 PF01425 Amidase D5R55_RS27615 PF00072 Response regulator receiver domain D5R55_RS27615 PF00196 Bacterial regulatory proteins, luxR family D5R55_RS27620 PF01613 Flavin reductase like domain D5R55_RS27635 PF01037 Lrp/AsnC ligand binding domain D5R55_RS27675 PF09335 SNARE associated Golgi protein D5R55_RS27690 PF00196 Bacterial regulatory proteins, luxR family D5R55_RS27690 PF00072 Response regulator receiver domain D5R55_RS27695 PF05231 MASE1 D5R55_RS27695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS27695 PF07730 Histidine kinase D5R55_RS27710 PF07690 Major Facilitator Superfamily D5R55_RS27720 PF00072 Response regulator receiver domain D5R55_RS27720 PF00486 Transcriptional regulatory protein, C terminal D5R55_RS27725 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS27725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS27730 PF03781 Sulfatase-modifying factor enzyme 1 D5R55_RS27750 PF00884 Sulfatase D5R55_RS27750 PF16347 Domain of unknown function (DUF4976) D5R55_RS27760 PF00933 Glycosyl hydrolase family 3 N terminal domain D5R55_RS27760 PF14310 Fibronectin type III-like domain D5R55_RS27760 PF01915 Glycosyl hydrolase family 3 C-terminal domain D5R55_RS27770 PF00005 ABC transporter D5R55_RS27775 PF00005 ABC transporter D5R55_RS27775 PF12399 Branched-chain amino acid ATP-binding cassette transporter D5R55_RS27780 PF02653 Branched-chain amino acid transport system / permease component D5R55_RS27785 PF13458 Periplasmic binding protein D5R55_RS27795 PF03466 LysR substrate binding domain D5R55_RS27795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS27800 PF13454 FAD-NAD(P)-binding D5R55_RS27815 PF00012 Hsp70 protein D5R55_RS27820 PF00012 Hsp70 protein D5R55_RS27840 PF03466 LysR substrate binding domain D5R55_RS27840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS27845 PF14031 Putative serine dehydratase domain D5R55_RS27845 PF01168 Alanine racemase, N-terminal domain D5R55_RS27850 PF02423 Ornithine cyclodeaminase/mu-crystallin family D5R55_RS27855 PF13419 Haloacid dehalogenase-like hydrolase D5R55_RS27860 PF02798 Glutathione S-transferase, N-terminal domain D5R55_RS27880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS27880 PF03466 LysR substrate binding domain D5R55_RS27885 PF00248 Aldo/keto reductase family D5R55_RS27890 PF07690 Major Facilitator Superfamily D5R55_RS27910 PF00378 Enoyl-CoA hydratase/isomerase D5R55_RS27915 PF13426 PAS domain D5R55_RS27915 PF00563 EAL domain D5R55_RS27915 PF00990 Diguanylate cyclase, GGDEF domain D5R55_RS27920 PF05378 Hydantoinase/oxoprolinase N-terminal region D5R55_RS27920 PF01968 Hydantoinase/oxoprolinase D5R55_RS27925 PF07690 Major Facilitator Superfamily D5R55_RS27930 PF07286 Protein of unknown function (DUF1445) D5R55_RS27940 PF03466 LysR substrate binding domain D5R55_RS27940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS27960 PF03180 NLPA lipoprotein D5R55_RS27965 PF03781 Sulfatase-modifying factor enzyme 1 D5R55_RS27970 PF00884 Sulfatase D5R55_RS27985 PF03466 LysR substrate binding domain D5R55_RS27985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS27990 PF08240 Alcohol dehydrogenase GroES-like domain D5R55_RS27990 PF00107 Zinc-binding dehydrogenase D5R55_RS27995 PF00166 Chaperonin 10 Kd subunit D5R55_RS28000 PF00118 TCP-1/cpn60 chaperonin family D5R55_RS28010 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D5R55_RS28015 PF00696 Amino acid kinase family D5R55_RS28020 PF00266 Aminotransferase class-V D5R55_RS28030 PF01381 Helix-turn-helix D5R55_RS28030 PF08671 Anti-repressor SinI D5R55_RS28035 PF00132 Bacterial transferase hexapeptide (six repeats) D5R55_RS28050 PF17287 POTRA domain D5R55_RS28050 PF08479 POTRA domain, ShlB-type D5R55_RS28050 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB D5R55_RS28080 PF01425 Amidase D5R55_RS28110 PF06441 Epoxide hydrolase N terminus D5R55_RS28120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS28120 PF03466 LysR substrate binding domain D5R55_RS28125 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region D5R55_RS28125 PF01243 Pyridoxamine 5'-phosphate oxidase D5R55_RS28135 PF00155 Aminotransferase class I and II D5R55_RS28140 PF01593 Flavin containing amine oxidoreductase D5R55_RS28165 PF03466 LysR substrate binding domain D5R55_RS28165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS28170 PF00171 Aldehyde dehydrogenase family D5R55_RS28180 PF08659 KR domain D5R55_RS28180 PF00698 Acyl transferase domain D5R55_RS28180 PF08240 Alcohol dehydrogenase GroES-like domain D5R55_RS28180 PF02801 Beta-ketoacyl synthase, C-terminal domain D5R55_RS28180 PF00109 Beta-ketoacyl synthase, N-terminal domain D5R55_RS28180 PF00550 Phosphopantetheine attachment site D5R55_RS28180 PF16197 Ketoacyl-synthetase C-terminal extension D5R55_RS28180 PF00107 Zinc-binding dehydrogenase D5R55_RS28180 PF14765 Polyketide synthase dehydratase D5R55_RS28195 PF01515 Phosphate acetyl/butaryl transferase D5R55_RS28195 PF03949 Malic enzyme, NAD binding domain D5R55_RS28195 PF00390 Malic enzyme, N-terminal domain D5R55_RS28255 PF00144 Beta-lactamase D5R55_RS28260 PF01266 FAD dependent oxidoreductase D5R55_RS28265 PF13458 Periplasmic binding protein D5R55_RS28270 PF05532 CsbD-like D5R55_RS28275 PF00072 Response regulator receiver domain D5R55_RS28275 PF00196 Bacterial regulatory proteins, luxR family D5R55_RS28280 PF04972 BON domain D5R55_RS28285 PF05532 CsbD-like D5R55_RS28295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS28295 PF03466 LysR substrate binding domain D5R55_RS28305 PF07715 TonB-dependent Receptor Plug Domain D5R55_RS28305 PF00593 TonB dependent receptor D5R55_RS28310 PF00171 Aldehyde dehydrogenase family D5R55_RS28340 PF07715 TonB-dependent Receptor Plug Domain D5R55_RS28340 PF00593 TonB dependent receptor D5R55_RS28345 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D5R55_RS28360 PF01370 NAD dependent epimerase/dehydratase family D5R55_RS28365 PF00356 Bacterial regulatory proteins, lacI family D5R55_RS28370 PF07690 Major Facilitator Superfamily D5R55_RS28375 PF12833 Helix-turn-helix domain D5R55_RS28375 PF00730 HhH-GPD superfamily base excision DNA repair protein D5R55_RS28375 PF06029 AlkA N-terminal domain D5R55_RS28375 PF02805 Metal binding domain of Ada D5R55_RS28380 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D5R55_RS28380 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D5R55_RS28385 PF12833 Helix-turn-helix domain D5R55_RS28385 PF02311 AraC-like ligand binding domain D5R55_RS28390 PF02548 Ketopantoate hydroxymethyltransferase D5R55_RS28395 PF01037 Lrp/AsnC ligand binding domain D5R55_RS28405 PF01380 SIS domain D5R55_RS28430 PF00092 von Willebrand factor type A domain D5R55_RS28445 PF01809 Putative membrane protein insertion efficiency factor D5R55_RS28455 PF02646 RmuC family D5R55_RS28465 PF01638 HxlR-like helix-turn-helix D5R55_RS28485 PF08521 Two-component sensor kinase N-terminal D5R55_RS28485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS28485 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS28490 PF00486 Transcriptional regulatory protein, C terminal D5R55_RS28490 PF00072 Response regulator receiver domain D5R55_RS28505 PF04717 Type VI secretion system, phage-baseplate injector D5R55_RS28505 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) D5R55_RS28505 PF13296 Putative type VI secretion system Rhs element Vgr D5R55_RS28530 PF00266 Aminotransferase class-V D5R55_RS28570 PF12323 Helix-turn-helix domain D5R55_RS28570 PF07282 Putative transposase DNA-binding domain D5R55_RS28570 PF01385 Probable transposase D5R55_RS28605 PF00072 Response regulator receiver domain D5R55_RS28605 PF00486 Transcriptional regulatory protein, C terminal D5R55_RS28610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS28610 PF00672 HAMP domain D5R55_RS28610 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS28625 PF01545 Cation efflux family D5R55_RS28630 PF02583 Metal-sensitive transcriptional repressor D5R55_RS28645 PF00873 AcrB/AcrD/AcrF family D5R55_RS28650 PF00529 HlyD membrane-fusion protein of T1SS D5R55_RS28650 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D5R55_RS28665 PF02798 Glutathione S-transferase, N-terminal domain D5R55_RS28665 PF00043 Glutathione S-transferase, C-terminal domain D5R55_RS28670 PF01638 HxlR-like helix-turn-helix D5R55_RS28680 PF07690 Major Facilitator Superfamily D5R55_RS28700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS28700 PF03466 LysR substrate binding domain D5R55_RS28710 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D5R55_RS28715 PF02560 Cyanate lyase C-terminal domain D5R55_RS28720 PF00484 Carbonic anhydrase D5R55_RS28725 PF03466 LysR substrate binding domain D5R55_RS28725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS28740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS28740 PF03466 LysR substrate binding domain D5R55_RS28750 PF03466 LysR substrate binding domain D5R55_RS28750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS28755 PF08714 Formaldehyde-activating enzyme (Fae) D5R55_RS28760 PF00248 Aldo/keto reductase family D5R55_RS28765 PF00171 Aldehyde dehydrogenase family D5R55_RS28770 PF00083 Sugar (and other) transporter D5R55_RS28785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS28785 PF03466 LysR substrate binding domain D5R55_RS28790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS28790 PF03466 LysR substrate binding domain D5R55_RS28795 PF00171 Aldehyde dehydrogenase family D5R55_RS28800 PF07690 Major Facilitator Superfamily D5R55_RS28805 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D5R55_RS28805 PF13378 Enolase C-terminal domain-like D5R55_RS28810 PF05199 GMC oxidoreductase D5R55_RS28810 PF00732 GMC oxidoreductase D5R55_RS28845 PF00005 ABC transporter D5R55_RS28845 PF00571 CBS domain D5R55_RS28850 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS28860 PF13609 Gram-negative porin D5R55_RS28865 PF00905 Penicillin binding protein transpeptidase domain D5R55_RS28870 PF01757 Acyltransferase family D5R55_RS28880 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D5R55_RS28880 PF00205 Thiamine pyrophosphate enzyme, central domain D5R55_RS28880 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D5R55_RS28885 PF01037 Lrp/AsnC ligand binding domain D5R55_RS28890 PF00456 Transketolase, thiamine diphosphate binding domain D5R55_RS28890 PF17831 Pyruvate dehydrogenase E1 component middle domain D5R55_RS28895 PF01037 Lrp/AsnC ligand binding domain D5R55_RS28900 PF00291 Pyridoxal-phosphate dependent enzyme D5R55_RS28905 PF02397 Bacterial sugar transferase D5R55_RS28910 PF10531 SLBB domain D5R55_RS28910 PF02563 Polysaccharide biosynthesis/export protein D5R55_RS28915 PF01451 Low molecular weight phosphotyrosine protein phosphatase D5R55_RS28920 PF13614 AAA domain D5R55_RS28920 PF02706 Chain length determinant protein D5R55_RS28920 PF13807 G-rich domain on putative tyrosine kinase D5R55_RS28925 PF00534 Glycosyl transferases group 1 D5R55_RS28925 PF13439 Glycosyltransferase Family 4 D5R55_RS28945 PF01757 Acyltransferase family D5R55_RS28950 PF09222 Fimbrial adhesin F17-AG, lectin domain D5R55_RS28950 PF00419 Fimbrial protein D5R55_RS28965 PF13954 PapC N-terminal domain D5R55_RS28965 PF13953 PapC C-terminal domain D5R55_RS28965 PF00577 Outer membrane usher protein D5R55_RS28970 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D5R55_RS28970 PF02753 Pili assembly chaperone PapD, C-terminal domain D5R55_RS28980 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS28980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS28980 PF00072 Response regulator receiver domain D5R55_RS28980 PF09456 RcsC Alpha-Beta-Loop (ABL) D5R55_RS28985 PF00072 Response regulator receiver domain D5R55_RS28985 PF00196 Bacterial regulatory proteins, luxR family D5R55_RS28995 PF09456 RcsC Alpha-Beta-Loop (ABL) D5R55_RS28995 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS28995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS28995 PF00072 Response regulator receiver domain D5R55_RS29025 PF00989 PAS fold D5R55_RS29025 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5R55_RS29025 PF00072 Response regulator receiver domain D5R55_RS29025 PF01627 Hpt domain D5R55_RS29025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS29025 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS29030 PF01894 Uncharacterised protein family UPF0047 D5R55_RS29040 PF01613 Flavin reductase like domain D5R55_RS29060 PF01810 LysE type translocator D5R55_RS29065 PF05973 Phage derived protein Gp49-like (DUF891) D5R55_RS29075 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family D5R55_RS29085 PF01037 Lrp/AsnC ligand binding domain D5R55_RS29100 PF01975 Survival protein SurE D5R55_RS29130 PF03466 LysR substrate binding domain D5R55_RS29130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS29135 PF00248 Aldo/keto reductase family D5R55_RS29140 PF00005 ABC transporter D5R55_RS29140 PF00664 ABC transporter transmembrane region D5R55_RS29165 PF00578 AhpC/TSA family D5R55_RS29170 PF13609 Gram-negative porin D5R55_RS29175 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5R55_RS29180 PF01546 Peptidase family M20/M25/M40 D5R55_RS29180 PF07687 Peptidase dimerisation domain D5R55_RS29185 PF03466 LysR substrate binding domain D5R55_RS29185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS29190 PF03358 NADPH-dependent FMN reductase D5R55_RS29195 PF01758 Sodium Bile acid symporter family D5R55_RS29205 PF01022 Bacterial regulatory protein, arsR family D5R55_RS29210 PF00576 HIUase/Transthyretin family D5R55_RS29230 PF00682 HMGL-like D5R55_RS29230 PF08502 LeuA allosteric (dimerisation) domain D5R55_RS29255 PF01551 Peptidase family M23 D5R55_RS29260 PF00924 Mechanosensitive ion channel D5R55_RS29260 PF05552 Conserved TM helix D5R55_RS29270 PF06039 Malate:quinone oxidoreductase (Mqo) D5R55_RS29280 PF00271 Helicase conserved C-terminal domain D5R55_RS29280 PF00270 DEAD/DEAH box helicase D5R55_RS29280 PF03880 DbpA RNA binding domain D5R55_RS29300 PF03594 Benzoate membrane transport protein D5R55_RS29315 PF05947 Type VI secretion system, TssF D5R55_RS29360 PF04717 Type VI secretion system, phage-baseplate injector D5R55_RS29365 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath D5R55_RS29385 PF13488 Glycine zipper D5R55_RS29385 PF00691 OmpA family D5R55_RS29395 PF00004 ATPase family associated with various cellular activities (AAA) D5R55_RS29395 PF07724 AAA domain (Cdc48 subfamily) D5R55_RS29395 PF17871 AAA lid domain D5R55_RS29395 PF10431 C-terminal, D2-small domain, of ClpB protein D5R55_RS29415 PF12833 Helix-turn-helix domain D5R55_RS29425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS29425 PF03466 LysR substrate binding domain D5R55_RS29430 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5R55_RS29455 PF00563 EAL domain D5R55_RS29455 PF00990 Diguanylate cyclase, GGDEF domain D5R55_RS29455 PF00498 FHA domain D5R55_RS29465 PF03812 2-keto-3-deoxygluconate permease D5R55_RS29475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS29475 PF03466 LysR substrate binding domain D5R55_RS29480 PF03104 DNA polymerase family B, exonuclease domain D5R55_RS29480 PF00136 DNA polymerase family B D5R55_RS29495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS29495 PF03466 LysR substrate binding domain D5R55_RS29500 PF02770 Acyl-CoA dehydrogenase, middle domain D5R55_RS29500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D5R55_RS29500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D5R55_RS29530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D5R55_RS29530 PF02770 Acyl-CoA dehydrogenase, middle domain D5R55_RS29530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D5R55_RS29540 PF01266 FAD dependent oxidoreductase D5R55_RS29545 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D5R55_RS29545 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D5R55_RS29550 PF00501 AMP-binding enzyme D5R55_RS29550 PF13193 AMP-binding enzyme C-terminal domain D5R55_RS29565 PF01593 Flavin containing amine oxidoreductase D5R55_RS29580 PF03176 MMPL family D5R55_RS29595 PF01042 Endoribonuclease L-PSP D5R55_RS29605 PF00440 Bacterial regulatory proteins, tetR family D5R55_RS29620 PF01593 Flavin containing amine oxidoreductase D5R55_RS29625 PF00486 Transcriptional regulatory protein, C terminal D5R55_RS29625 PF00072 Response regulator receiver domain D5R55_RS29630 PF00672 HAMP domain D5R55_RS29630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS29630 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS29640 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS29645 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS29650 PF00107 Zinc-binding dehydrogenase D5R55_RS29650 PF08240 Alcohol dehydrogenase GroES-like domain D5R55_RS29655 PF17912 MalK OB fold domain D5R55_RS29655 PF00005 ABC transporter D5R55_RS29665 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D5R55_RS29665 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D5R55_RS29670 PF13411 MerR HTH family regulatory protein D5R55_RS29670 PF02607 B12 binding domain D5R55_RS29670 PF02310 B12 binding domain D5R55_RS29695 PF00375 Sodium:dicarboxylate symporter family D5R55_RS29700 PF13439 Glycosyltransferase Family 4 D5R55_RS29700 PF00534 Glycosyl transferases group 1 D5R55_RS29720 PF06339 Ectoine synthase D5R55_RS29760 PF00313 'Cold-shock' DNA-binding domain D5R55_RS29855 PF07690 Major Facilitator Superfamily D5R55_RS29860 PF02627 Carboxymuconolactone decarboxylase family D5R55_RS29865 PF00561 alpha/beta hydrolase fold D5R55_RS29870 PF10397 Adenylosuccinate lyase C-terminus D5R55_RS29870 PF00206 Lyase D5R55_RS29875 PF01144 Coenzyme A transferase D5R55_RS29880 PF01144 Coenzyme A transferase D5R55_RS29890 PF01494 FAD binding domain D5R55_RS29895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS29895 PF03466 LysR substrate binding domain D5R55_RS29900 PF01227 GTP cyclohydrolase I D5R55_RS29910 PF00132 Bacterial transferase hexapeptide (six repeats) D5R55_RS29930 PF00582 Universal stress protein family D5R55_RS29935 PF13545 Crp-like helix-turn-helix domain D5R55_RS29935 PF00027 Cyclic nucleotide-binding domain D5R55_RS29940 PF03466 LysR substrate binding domain D5R55_RS29940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS29945 PF01810 LysE type translocator D5R55_RS29950 PF00248 Aldo/keto reductase family D5R55_RS29965 PF05199 GMC oxidoreductase D5R55_RS29965 PF00732 GMC oxidoreductase D5R55_RS29980 PF07690 Major Facilitator Superfamily D5R55_RS29985 PF00107 Zinc-binding dehydrogenase D5R55_RS29985 PF08240 Alcohol dehydrogenase GroES-like domain D5R55_RS30000 PF02342 TerD domain D5R55_RS30005 PF02342 TerD domain D5R55_RS30015 PF02342 TerD domain D5R55_RS30020 PF02342 TerD domain D5R55_RS30030 PF15608 PELOTA RNA binding domain D5R55_RS30030 PF11202 Phosphoribosyl transferase (PRTase) D5R55_RS30045 PF12791 Anti-sigma factor N-terminus D5R55_RS30050 PF03551 Transcriptional regulator PadR-like family D5R55_RS30055 PF08021 Siderophore-interacting FAD-binding domain D5R55_RS30055 PF04954 Siderophore-interacting protein D5R55_RS30065 PF01569 PAP2 superfamily D5R55_RS30075 PF06314 Acetoacetate decarboxylase (ADC) D5R55_RS30095 PF03466 LysR substrate binding domain D5R55_RS30095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS30100 PF01118 Semialdehyde dehydrogenase, NAD binding domain D5R55_RS30105 PF03466 LysR substrate binding domain D5R55_RS30105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS30110 PF00180 Isocitrate/isopropylmalate dehydrogenase D5R55_RS30125 PF00440 Bacterial regulatory proteins, tetR family D5R55_RS30135 PF00107 Zinc-binding dehydrogenase D5R55_RS30135 PF08240 Alcohol dehydrogenase GroES-like domain D5R55_RS30140 PF00155 Aminotransferase class I and II D5R55_RS30175 PF13614 AAA domain D5R55_RS30180 PF03960 ArsC family D5R55_RS30190 PF04542 Sigma-70 region 2 D5R55_RS30190 PF08281 Sigma-70, region 4 D5R55_RS30195 PF03358 NADPH-dependent FMN reductase D5R55_RS30200 PF00072 Response regulator receiver domain D5R55_RS30200 PF13188 PAS domain D5R55_RS30200 PF08448 PAS fold D5R55_RS30200 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS30200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS30210 PF00072 Response regulator receiver domain D5R55_RS30220 PF00990 Diguanylate cyclase, GGDEF domain D5R55_RS30245 PF01593 Flavin containing amine oxidoreductase D5R55_RS30250 PF13249 Squalene-hopene cyclase N-terminal domain D5R55_RS30250 PF13243 Squalene-hopene cyclase C-terminal domain D5R55_RS30255 PF01048 Phosphorylase superfamily D5R55_RS30275 PF00072 Response regulator receiver domain D5R55_RS30275 PF00196 Bacterial regulatory proteins, luxR family D5R55_RS30280 PF17200 Single Cache domain 2 D5R55_RS30280 PF07730 Histidine kinase D5R55_RS30285 PF00990 Diguanylate cyclase, GGDEF domain D5R55_RS30285 PF00360 Phytochrome region D5R55_RS30285 PF00563 EAL domain D5R55_RS30285 PF01590 GAF domain D5R55_RS30290 PF01274 Malate synthase D5R55_RS30295 PF03928 Haem-degrading D5R55_RS30300 PF00270 DEAD/DEAH box helicase D5R55_RS30300 PF00271 Helicase conserved C-terminal domain D5R55_RS30310 PF03466 LysR substrate binding domain D5R55_RS30310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS30320 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS30325 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS30335 PF08532 Beta-galactosidase trimerisation domain D5R55_RS30335 PF02449 Beta-galactosidase D5R55_RS30335 PF08533 Beta-galactosidase C-terminal domain D5R55_RS30340 PF00005 ABC transporter D5R55_RS30340 PF17912 MalK OB fold domain D5R55_RS30345 PF00356 Bacterial regulatory proteins, lacI family D5R55_RS30350 PF00392 Bacterial regulatory proteins, gntR family D5R55_RS30350 PF07729 FCD domain D5R55_RS30360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS30360 PF03466 LysR substrate binding domain D5R55_RS30365 PF00920 Dehydratase family D5R55_RS30370 PF07690 Major Facilitator Superfamily D5R55_RS30375 PF00701 Dihydrodipicolinate synthetase family D5R55_RS30380 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D5R55_RS30385 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D5R55_RS30390 PF00005 ABC transporter D5R55_RS30395 PF02653 Branched-chain amino acid transport system / permease component D5R55_RS30400 PF08450 SMP-30/Gluconolactonase/LRE-like region D5R55_RS30415 PF00378 Enoyl-CoA hydratase/isomerase D5R55_RS30420 PF00171 Aldehyde dehydrogenase family D5R55_RS30425 PF07993 Male sterility protein D5R55_RS30425 PF00501 AMP-binding enzyme D5R55_RS30425 PF00550 Phosphopantetheine attachment site D5R55_RS30430 PF07690 Major Facilitator Superfamily D5R55_RS30435 PF13609 Gram-negative porin D5R55_RS30440 PF07519 Tannase and feruloyl esterase D5R55_RS30445 PF01037 Lrp/AsnC ligand binding domain D5R55_RS30450 PF00291 Pyridoxal-phosphate dependent enzyme D5R55_RS30455 PF01546 Peptidase family M20/M25/M40 D5R55_RS30455 PF07687 Peptidase dimerisation domain D5R55_RS30485 PF01979 Amidohydrolase family D5R55_RS30490 PF01979 Amidohydrolase family D5R55_RS30500 PF03466 LysR substrate binding domain D5R55_RS30500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS30520 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5R55_RS30530 PF07702 UTRA domain D5R55_RS30530 PF00392 Bacterial regulatory proteins, gntR family D5R55_RS30535 PF08671 Anti-repressor SinI D5R55_RS30535 PF01381 Helix-turn-helix D5R55_RS30540 PF00596 Class II Aldolase and Adducin N-terminal domain D5R55_RS30545 PF00701 Dihydrodipicolinate synthetase family D5R55_RS30550 PF03473 MOSC domain D5R55_RS30550 PF03475 3-alpha domain D5R55_RS30555 PF00106 short chain dehydrogenase D5R55_RS30560 PF04337 Protein of unknown function, DUF480 D5R55_RS30570 PF00793 DAHP synthetase I family D5R55_RS30580 PF01678 Diaminopimelate epimerase D5R55_RS30585 PF13722 5TM C-terminal transporter carbon starvation CstA D5R55_RS30585 PF02554 Carbon starvation protein CstA D5R55_RS30590 PF04328 Selenoprotein, putative D5R55_RS30595 PF07690 Major Facilitator Superfamily D5R55_RS30600 PF01022 Bacterial regulatory protein, arsR family D5R55_RS30605 PF03006 Haemolysin-III related D5R55_RS30645 PF06463 Molybdenum Cofactor Synthesis C D5R55_RS30645 PF04055 Radical SAM superfamily D5R55_RS30650 PF02401 LytB protein D5R55_RS30670 PF01370 NAD dependent epimerase/dehydratase family D5R55_RS30675 PF00708 Acylphosphatase D5R55_RS30695 PF00854 POT family D5R55_RS30710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D5R55_RS30715 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS30720 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS30720 PF12911 N-terminal TM domain of oligopeptide transport permease C D5R55_RS30725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D5R55_RS30725 PF00005 ABC transporter D5R55_RS30730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D5R55_RS30730 PF00005 ABC transporter D5R55_RS30735 PF03573 outer membrane porin, OprD family D5R55_RS30750 PF04185 Phosphoesterase family D5R55_RS30750 PF05506 Domain of unknown function (DUF756) D5R55_RS30760 PF00583 Acetyltransferase (GNAT) family D5R55_RS30780 PF00158 Sigma-54 interaction domain D5R55_RS30780 PF01590 GAF domain D5R55_RS30795 PF00816 H-NS histone family D5R55_RS30800 PF00583 Acetyltransferase (GNAT) family D5R55_RS30800 PF13607 Succinyl-CoA ligase like flavodoxin domain D5R55_RS30800 PF13380 CoA binding domain D5R55_RS30820 PF01557 Fumarylacetoacetate (FAA) hydrolase family D5R55_RS30835 PF06506 Propionate catabolism activator D5R55_RS30835 PF02954 Bacterial regulatory protein, Fis family D5R55_RS30835 PF00158 Sigma-54 interaction domain D5R55_RS30845 PF00285 Citrate synthase, C-terminal domain D5R55_RS30850 PF00330 Aconitase family (aconitate hydratase) D5R55_RS30850 PF00694 Aconitase C-terminal domain D5R55_RS30855 PF04303 PrpF protein D5R55_RS30860 PF02515 CoA-transferase family III D5R55_RS30870 PF05016 ParE toxin of type II toxin-antitoxin system, parDE D5R55_RS30880 PF02203 Tar ligand binding domain homologue D5R55_RS30880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5R55_RS30880 PF00672 HAMP domain D5R55_RS30890 PF02308 MgtC family D5R55_RS30905 PF00403 Heavy-metal-associated domain D5R55_RS30940 PF03466 LysR substrate binding domain D5R55_RS30940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS30950 PF08402 TOBE domain D5R55_RS30950 PF00005 ABC transporter D5R55_RS30990 PF02322 Cytochrome bd terminal oxidase subunit II D5R55_RS30995 PF01654 Cytochrome bd terminal oxidase subunit I D5R55_RS31000 PF01212 Beta-eliminating lyase D5R55_RS31010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS31010 PF03466 LysR substrate binding domain D5R55_RS31035 PF07690 Major Facilitator Superfamily D5R55_RS31040 PF03466 LysR substrate binding domain D5R55_RS31040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS31050 PF01614 Bacterial transcriptional regulator D5R55_RS31050 PF09339 IclR helix-turn-helix domain D5R55_RS31055 PF00682 HMGL-like D5R55_RS31060 PF02515 CoA-transferase family III D5R55_RS31065 PF07690 Major Facilitator Superfamily D5R55_RS31105 PF00106 short chain dehydrogenase D5R55_RS31110 PF07055 Enoyl reductase FAD binding domain D5R55_RS31110 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase D5R55_RS31110 PF12241 Trans-2-enoyl-CoA reductase catalytic region D5R55_RS31135 PF01370 NAD dependent epimerase/dehydratase family D5R55_RS31135 PF08338 Domain of unknown function (DUF1731) D5R55_RS31140 PF00043 Glutathione S-transferase, C-terminal domain D5R55_RS31140 PF13417 Glutathione S-transferase, N-terminal domain D5R55_RS31150 PF01230 HIT domain D5R55_RS31170 PF07883 Cupin domain D5R55_RS31170 PF05899 Protein of unknown function (DUF861) D5R55_RS31190 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase D5R55_RS31195 PF00905 Penicillin binding protein transpeptidase domain D5R55_RS31195 PF00912 Transglycosylase D5R55_RS31195 PF17092 Penicillin-binding protein OB-like domain D5R55_RS31200 PF03458 UPF0126 domain D5R55_RS31205 PF00005 ABC transporter D5R55_RS31210 PF01032 FecCD transport family D5R55_RS31215 PF01497 Periplasmic binding protein D5R55_RS31220 PF05171 Haemin-degrading HemS.ChuX domain D5R55_RS31225 PF00593 TonB dependent receptor D5R55_RS31225 PF07715 TonB-dependent Receptor Plug Domain D5R55_RS31245 PF13609 Gram-negative porin D5R55_RS31250 PF03180 NLPA lipoprotein D5R55_RS31260 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5R55_RS31265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS31265 PF03466 LysR substrate binding domain D5R55_RS31270 PF12833 Helix-turn-helix domain D5R55_RS31270 PF01965 DJ-1/PfpI family D5R55_RS31275 PF12823 Domain of unknown function (DUF3817) D5R55_RS31290 PF00860 Permease family D5R55_RS31300 PF01596 O-methyltransferase D5R55_RS31315 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D5R55_RS31320 PF00248 Aldo/keto reductase family D5R55_RS31325 PF00296 Luciferase-like monooxygenase D5R55_RS31335 PF07690 Major Facilitator Superfamily D5R55_RS31340 PF03466 LysR substrate binding domain D5R55_RS31340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS31345 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain D5R55_RS31345 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain D5R55_RS31350 PF08359 YsiA-like protein, C-terminal region D5R55_RS31350 PF00440 Bacterial regulatory proteins, tetR family D5R55_RS31355 PF00106 short chain dehydrogenase D5R55_RS31360 PF01614 Bacterial transcriptional regulator D5R55_RS31360 PF09339 IclR helix-turn-helix domain D5R55_RS31365 PF03737 Aldolase/RraA D5R55_RS31370 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D5R55_RS31370 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D5R55_RS31375 PF08450 SMP-30/Gluconolactonase/LRE-like region D5R55_RS31380 PF07690 Major Facilitator Superfamily D5R55_RS31385 PF00267 Gram-negative porin D5R55_RS31395 PF07690 Major Facilitator Superfamily D5R55_RS31405 PF07690 Major Facilitator Superfamily D5R55_RS31410 PF04909 Amidohydrolase D5R55_RS31415 PF12704 MacB-like periplasmic core domain D5R55_RS31415 PF02687 FtsX-like permease family D5R55_RS31415 PF00005 ABC transporter D5R55_RS31420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D5R55_RS31425 PF02321 Outer membrane efflux protein D5R55_RS31455 PF01965 DJ-1/PfpI family D5R55_RS31455 PF12833 Helix-turn-helix domain D5R55_RS31465 PF00106 short chain dehydrogenase D5R55_RS31475 PF00593 TonB dependent receptor D5R55_RS31475 PF07715 TonB-dependent Receptor Plug Domain D5R55_RS31480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D5R55_RS31485 PF00873 AcrB/AcrD/AcrF family D5R55_RS31490 PF02321 Outer membrane efflux protein D5R55_RS31500 PF12833 Helix-turn-helix domain D5R55_RS31500 PF02311 AraC-like ligand binding domain D5R55_RS31520 PF01546 Peptidase family M20/M25/M40 D5R55_RS31520 PF07687 Peptidase dimerisation domain D5R55_RS31525 PF07690 Major Facilitator Superfamily D5R55_RS31540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS31540 PF03466 LysR substrate binding domain D5R55_RS31545 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5R55_RS31555 PF01614 Bacterial transcriptional regulator D5R55_RS31555 PF09339 IclR helix-turn-helix domain D5R55_RS31560 PF02803 Thiolase, C-terminal domain D5R55_RS31560 PF00108 Thiolase, N-terminal domain D5R55_RS31575 PF08447 PAS fold D5R55_RS31575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5R55_RS31580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5R55_RS31580 PF08447 PAS fold D5R55_RS31585 PF00171 Aldehyde dehydrogenase family D5R55_RS31590 PF00202 Aminotransferase class-III D5R55_RS31595 PF00155 Aminotransferase class I and II D5R55_RS31595 PF00392 Bacterial regulatory proteins, gntR family D5R55_RS31600 PF02769 AIR synthase related protein, C-terminal domain D5R55_RS31600 PF00586 AIR synthase related protein, N-terminal domain D5R55_RS31620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS31620 PF03466 LysR substrate binding domain D5R55_RS31630 PF07859 alpha/beta hydrolase fold D5R55_RS31635 PF00529 HlyD membrane-fusion protein of T1SS D5R55_RS31635 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D5R55_RS31640 PF00873 AcrB/AcrD/AcrF family D5R55_RS31645 PF02321 Outer membrane efflux protein D5R55_RS31660 PF00440 Bacterial regulatory proteins, tetR family D5R55_RS31660 PF08361 MAATS-type transcriptional repressor, C-terminal region D5R55_RS31700 PF00158 Sigma-54 interaction domain D5R55_RS31700 PF02954 Bacterial regulatory protein, Fis family D5R55_RS31700 PF00072 Response regulator receiver domain D5R55_RS31705 PF02743 Cache domain D5R55_RS31705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS31705 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS31710 PF03390 2-hydroxycarboxylate transporter family D5R55_RS31715 PF03180 NLPA lipoprotein D5R55_RS31720 PF00296 Luciferase-like monooxygenase D5R55_RS31725 PF00005 ABC transporter D5R55_RS31725 PF09383 NIL domain D5R55_RS31730 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS31740 PF08028 Acyl-CoA dehydrogenase, C-terminal domain D5R55_RS31740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D5R55_RS31750 PF01037 Lrp/AsnC ligand binding domain D5R55_RS31755 PF01810 LysE type translocator D5R55_RS31775 PF07690 Major Facilitator Superfamily D5R55_RS31780 PF00171 Aldehyde dehydrogenase family D5R55_RS31795 PF00510 Cytochrome c oxidase subunit III D5R55_RS31805 PF00115 Cytochrome C and Quinol oxidase polypeptide I D5R55_RS31810 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D5R55_RS31830 PF00701 Dihydrodipicolinate synthetase family D5R55_RS31835 PF08666 SAF domain D5R55_RS31835 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus D5R55_RS31845 PF05025 RbsD / FucU transport protein family D5R55_RS31850 PF07681 DoxX D5R55_RS31855 PF07690 Major Facilitator Superfamily D5R55_RS31860 PF13458 Periplasmic binding protein D5R55_RS31870 PF12833 Helix-turn-helix domain D5R55_RS31880 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D5R55_RS31880 PF01261 Xylose isomerase-like TIM barrel D5R55_RS31885 PF01220 Dehydroquinase class II D5R55_RS31890 PF08501 Shikimate dehydrogenase substrate binding domain D5R55_RS31890 PF18317 Shikimate 5'-dehydrogenase C-terminal domain D5R55_RS31895 PF07690 Major Facilitator Superfamily D5R55_RS31900 PF00266 Aminotransferase class-V D5R55_RS31910 PF01547 Bacterial extracellular solute-binding protein D5R55_RS31915 PF08402 TOBE domain D5R55_RS31915 PF00005 ABC transporter D5R55_RS31920 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS31925 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS31930 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase D5R55_RS31935 PF00171 Aldehyde dehydrogenase family D5R55_RS31940 PF01966 HD domain D5R55_RS31975 PF07690 Major Facilitator Superfamily D5R55_RS31980 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA D5R55_RS31985 PF01384 Phosphate transporter family D5R55_RS32005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS32005 PF03466 LysR substrate binding domain D5R55_RS32010 PF01717 Cobalamin-independent synthase, Catalytic domain D5R55_RS32010 PF08267 Cobalamin-independent synthase, N-terminal domain D5R55_RS32015 PF07690 Major Facilitator Superfamily D5R55_RS32015 PF00083 Sugar (and other) transporter D5R55_RS32020 PF00491 Arginase family D5R55_RS32025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS32025 PF03466 LysR substrate binding domain D5R55_RS32030 PF01037 Lrp/AsnC ligand binding domain D5R55_RS32035 PF01810 LysE type translocator D5R55_RS32040 PF09286 Pro-kumamolisin, activation domain D5R55_RS32040 PF00082 Subtilase family D5R55_RS32050 PF02540 NAD synthase D5R55_RS32065 PF08220 DeoR-like helix-turn-helix domain D5R55_RS32065 PF00455 DeoR C terminal sensor domain D5R55_RS32075 PF00440 Bacterial regulatory proteins, tetR family D5R55_RS32080 PF01266 FAD dependent oxidoreductase D5R55_RS32085 PF00324 Amino acid permease D5R55_RS32090 PF00171 Aldehyde dehydrogenase family D5R55_RS32095 PF12795 Mechanosensitive ion channel porin domain D5R55_RS32095 PF00924 Mechanosensitive ion channel D5R55_RS32095 PF12794 Mechanosensitive ion channel inner membrane domain 1 D5R55_RS32120 PF00083 Sugar (and other) transporter D5R55_RS32130 PF13609 Gram-negative porin D5R55_RS32135 PF01156 Inosine-uridine preferring nucleoside hydrolase D5R55_RS32145 PF00860 Permease family D5R55_RS32150 PF00962 Adenosine/AMP deaminase D5R55_RS32165 PF00912 Transglycosylase D5R55_RS32165 PF17092 Penicillin-binding protein OB-like domain D5R55_RS32165 PF00905 Penicillin binding protein transpeptidase domain D5R55_RS32170 PF00392 Bacterial regulatory proteins, gntR family D5R55_RS32180 PF00578 AhpC/TSA family D5R55_RS32180 PF02683 Cytochrome C biogenesis protein transmembrane region D5R55_RS32180 PF17991 Thioredoxin like C-terminal domain D5R55_RS32190 PF00486 Transcriptional regulatory protein, C terminal D5R55_RS32190 PF00072 Response regulator receiver domain D5R55_RS32195 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS32195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS32195 PF00672 HAMP domain D5R55_RS32200 PF00561 alpha/beta hydrolase fold D5R55_RS32215 PF01810 LysE type translocator D5R55_RS32220 PF13609 Gram-negative porin D5R55_RS32235 PF00593 TonB dependent receptor D5R55_RS32235 PF07715 TonB-dependent Receptor Plug Domain D5R55_RS32245 PF13609 Gram-negative porin D5R55_RS32250 PF07690 Major Facilitator Superfamily D5R55_RS32255 PF00355 Rieske [2Fe-2S] domain D5R55_RS32260 PF00175 Oxidoreductase NAD-binding domain D5R55_RS32260 PF00111 2Fe-2S iron-sulfur cluster binding domain D5R55_RS32265 PF00355 Rieske [2Fe-2S] domain D5R55_RS32280 PF02770 Acyl-CoA dehydrogenase, middle domain D5R55_RS32280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D5R55_RS32280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D5R55_RS32285 PF01039 Carboxyl transferase domain D5R55_RS32290 PF00378 Enoyl-CoA hydratase/isomerase D5R55_RS32290 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D5R55_RS32290 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D5R55_RS32295 PF02785 Biotin carboxylase C-terminal domain D5R55_RS32295 PF00289 Biotin carboxylase, N-terminal domain D5R55_RS32295 PF00364 Biotin-requiring enzyme D5R55_RS32295 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D5R55_RS32310 PF05506 Domain of unknown function (DUF756) D5R55_RS32310 PF04185 Phosphoesterase family D5R55_RS32330 PF13188 PAS domain D5R55_RS32330 PF03707 Bacterial signalling protein N terminal repeat D5R55_RS32330 PF00990 Diguanylate cyclase, GGDEF domain D5R55_RS32330 PF00563 EAL domain D5R55_RS32355 PF00691 OmpA family D5R55_RS32355 PF04972 BON domain D5R55_RS32360 PF03895 YadA-like membrane anchor domain D5R55_RS32360 PF05658 Head domain of trimeric autotransporter adhesin D5R55_RS32360 PF05662 Coiled stalk of trimeric autotransporter adhesin D5R55_RS32405 PF00005 ABC transporter D5R55_RS32405 PF00571 CBS domain D5R55_RS32410 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS32415 PF12833 Helix-turn-helix domain D5R55_RS32415 PF01965 DJ-1/PfpI family D5R55_RS32420 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D5R55_RS32425 PF03458 UPF0126 domain D5R55_RS32445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS32445 PF03466 LysR substrate binding domain D5R55_RS32485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS32485 PF08521 Two-component sensor kinase N-terminal D5R55_RS32485 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS32490 PF00072 Response regulator receiver domain D5R55_RS32490 PF00486 Transcriptional regulatory protein, C terminal D5R55_RS32510 PF01370 NAD dependent epimerase/dehydratase family D5R55_RS32515 PF01261 Xylose isomerase-like TIM barrel D5R55_RS32520 PF07690 Major Facilitator Superfamily D5R55_RS32525 PF00596 Class II Aldolase and Adducin N-terminal domain D5R55_RS32530 PF07005 Sugar-binding N-terminal domain D5R55_RS32530 PF17042 Nucleotide-binding C-terminal domain D5R55_RS32535 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D5R55_RS32535 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D5R55_RS32540 PF07729 FCD domain D5R55_RS32540 PF00392 Bacterial regulatory proteins, gntR family D5R55_RS32545 PF01965 DJ-1/PfpI family D5R55_RS32545 PF12833 Helix-turn-helix domain D5R55_RS32550 PF03315 Serine dehydratase beta chain D5R55_RS32550 PF03313 Serine dehydratase alpha chain D5R55_RS32555 PF01266 FAD dependent oxidoreductase D5R55_RS32560 PF04267 Sarcosine oxidase, delta subunit family D5R55_RS32565 PF01571 Aminomethyltransferase folate-binding domain D5R55_RS32565 PF17806 Sarcosine oxidase A3 domain D5R55_RS32565 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5R55_RS32565 PF08669 Glycine cleavage T-protein C-terminal barrel domain D5R55_RS32585 PF07804 HipA-like C-terminal domain D5R55_RS32585 PF13657 HipA N-terminal domain D5R55_RS32605 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS32610 PF00005 ABC transporter D5R55_RS32615 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS32620 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D5R55_RS32625 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D5R55_RS32625 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D5R55_RS32635 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain D5R55_RS32635 PF02129 X-Pro dipeptidyl-peptidase (S15 family) D5R55_RS32650 PF02687 FtsX-like permease family D5R55_RS32650 PF12704 MacB-like periplasmic core domain D5R55_RS32655 PF07703 Alpha-2-macroglobulin bait region domain D5R55_RS32655 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain D5R55_RS32655 PF11974 Bacterial alpha-2-macroglobulin MG3 domain D5R55_RS32655 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain D5R55_RS32655 PF00207 Alpha-2-macroglobulin family D5R55_RS32655 PF17962 Bacterial macroglobulin domain 6 D5R55_RS32655 PF01835 MG2 domain D5R55_RS32660 PF00905 Penicillin binding protein transpeptidase domain D5R55_RS32660 PF00912 Transglycosylase D5R55_RS32660 PF06832 Penicillin-Binding Protein C-terminus Family D5R55_RS32665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5R55_RS32685 PF13360 PQQ-like domain D5R55_RS32685 PF01011 PQQ enzyme repeat D5R55_RS32695 PF00561 alpha/beta hydrolase fold D5R55_RS32700 PF00158 Sigma-54 interaction domain D5R55_RS32700 PF01590 GAF domain D5R55_RS32700 PF02954 Bacterial regulatory protein, Fis family D5R55_RS32710 PF08042 PqqA family D5R55_RS32715 PF12706 Beta-lactamase superfamily domain D5R55_RS32720 PF03070 TENA/THI-4/PQQC family D5R55_RS32725 PF05402 Coenzyme PQQ synthesis protein D (PqqD) D5R55_RS32730 PF04055 Radical SAM superfamily D5R55_RS32730 PF13186 Iron-sulfur cluster-binding domain D5R55_RS32755 PF00756 Putative esterase D5R55_RS32760 PF12697 Alpha/beta hydrolase family D5R55_RS32770 PF03795 YCII-related domain D5R55_RS32775 PF13188 PAS domain D5R55_RS32775 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS32775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS32775 PF00072 Response regulator receiver domain D5R55_RS32775 PF08448 PAS fold D5R55_RS32790 PF07690 Major Facilitator Superfamily D5R55_RS32795 PF01061 ABC-2 type transporter D5R55_RS32800 PF00005 ABC transporter D5R55_RS32840 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase D5R55_RS32840 PF04101 Glycosyltransferase family 28 C-terminal domain D5R55_RS32855 PF00732 GMC oxidoreductase D5R55_RS32855 PF05199 GMC oxidoreductase D5R55_RS32860 PF00171 Aldehyde dehydrogenase family D5R55_RS32865 PF00440 Bacterial regulatory proteins, tetR family D5R55_RS32865 PF13977 BetI-type transcriptional repressor, C-terminal D5R55_RS32870 PF00561 alpha/beta hydrolase fold D5R55_RS32880 PF03033 Glycosyltransferase family 28 N-terminal domain D5R55_RS32885 PF07690 Major Facilitator Superfamily D5R55_RS32890 PF00535 Glycosyl transferase family 2 D5R55_RS32895 PF02321 Outer membrane efflux protein D5R55_RS32900 PF13533 Biotin-lipoyl like D5R55_RS32910 PF08240 Alcohol dehydrogenase GroES-like domain D5R55_RS32910 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D5R55_RS32920 PF00392 Bacterial regulatory proteins, gntR family D5R55_RS32920 PF00155 Aminotransferase class I and II D5R55_RS32935 PF00419 Fimbrial protein D5R55_RS32940 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D5R55_RS32940 PF02753 Pili assembly chaperone PapD, C-terminal domain D5R55_RS32945 PF13953 PapC C-terminal domain D5R55_RS32945 PF00577 Outer membrane usher protein D5R55_RS32945 PF13954 PapC N-terminal domain D5R55_RS32955 PF00196 Bacterial regulatory proteins, luxR family D5R55_RS32955 PF00072 Response regulator receiver domain D5R55_RS32960 PF00072 Response regulator receiver domain D5R55_RS32960 PF09456 RcsC Alpha-Beta-Loop (ABL) D5R55_RS32960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS32960 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS32965 PF12833 Helix-turn-helix domain D5R55_RS32965 PF01965 DJ-1/PfpI family D5R55_RS32970 PF00464 Serine hydroxymethyltransferase D5R55_RS32975 PF01244 Membrane dipeptidase (Peptidase family M19) D5R55_RS32985 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D5R55_RS32990 PF02754 Cysteine-rich domain D5R55_RS32990 PF13183 4Fe-4S dicluster domain D5R55_RS32995 PF00766 Electron transfer flavoprotein FAD-binding domain D5R55_RS32995 PF01012 Electron transfer flavoprotein domain D5R55_RS33005 PF00355 Rieske [2Fe-2S] domain D5R55_RS33005 PF00848 Ring hydroxylating alpha subunit (catalytic domain) D5R55_RS33010 PF00111 2Fe-2S iron-sulfur cluster binding domain D5R55_RS33010 PF00175 Oxidoreductase NAD-binding domain D5R55_RS33010 PF00970 Oxidoreductase FAD-binding domain D5R55_RS33015 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D5R55_RS33025 PF00551 Formyl transferase D5R55_RS33030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS33030 PF03466 LysR substrate binding domain D5R55_RS33040 PF12411 Choline sulfatase enzyme C terminal D5R55_RS33040 PF00884 Sulfatase D5R55_RS33045 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D5R55_RS33050 PF13609 Gram-negative porin D5R55_RS33055 PF03895 YadA-like membrane anchor domain D5R55_RS33055 PF05658 Head domain of trimeric autotransporter adhesin D5R55_RS33055 PF13018 Extended Signal Peptide of Type V secretion system D5R55_RS33055 PF05662 Coiled stalk of trimeric autotransporter adhesin D5R55_RS33070 PF01906 Putative heavy-metal-binding D5R55_RS33075 PF04151 Bacterial pre-peptidase C-terminal domain D5R55_RS33075 PF04389 Peptidase family M28 D5R55_RS33085 PF12833 Helix-turn-helix domain D5R55_RS33085 PF01965 DJ-1/PfpI family D5R55_RS33090 PF12833 Helix-turn-helix domain D5R55_RS33095 PF06433 Methylamine dehydrogenase heavy chain (MADH) D5R55_RS33100 PF07291 Methylamine utilisation protein MauE D5R55_RS33105 PF00578 AhpC/TSA family D5R55_RS33110 PF02975 Methylamine dehydrogenase, L chain D5R55_RS33130 PF01740 STAS domain D5R55_RS33130 PF00916 Sulfate permease family D5R55_RS33140 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D5R55_RS33145 PF05853 beta-keto acid cleavage enzyme D5R55_RS33150 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D5R55_RS33150 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D5R55_RS33160 PF07859 alpha/beta hydrolase fold D5R55_RS33165 PF02668 Taurine catabolism dioxygenase TauD, TfdA family D5R55_RS33165 PF06155 Protein of unknown function (DUF971) D5R55_RS33170 PF01757 Acyltransferase family D5R55_RS33180 PF00106 short chain dehydrogenase D5R55_RS33195 PF01557 Fumarylacetoacetate (FAA) hydrolase family D5R55_RS33200 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D5R55_RS33200 PF13378 Enolase C-terminal domain-like D5R55_RS33210 PF00005 ABC transporter D5R55_RS33215 PF02653 Branched-chain amino acid transport system / permease component D5R55_RS33225 PF04909 Amidohydrolase D5R55_RS33230 PF00392 Bacterial regulatory proteins, gntR family D5R55_RS33230 PF07729 FCD domain D5R55_RS33235 PF01070 FMN-dependent dehydrogenase D5R55_RS33240 PF00890 FAD binding domain D5R55_RS33250 PF13689 YfiR/HmsC-like D5R55_RS33255 PF00563 EAL domain D5R55_RS33255 PF03707 Bacterial signalling protein N terminal repeat D5R55_RS33255 PF00990 Diguanylate cyclase, GGDEF domain D5R55_RS33255 PF13188 PAS domain D5R55_RS33260 PF00691 OmpA family D5R55_RS33260 PF13505 Outer membrane protein beta-barrel domain D5R55_RS33270 PF04717 Type VI secretion system, phage-baseplate injector D5R55_RS33270 PF06715 Gp5 C-terminal repeat (3 copies) D5R55_RS33280 PF14220 Domain of unknown function (DUF4329) D5R55_RS33280 PF05593 RHS Repeat D5R55_RS33280 PF03527 RHS protein D5R55_RS33345 PF13458 Periplasmic binding protein D5R55_RS33350 PF02653 Branched-chain amino acid transport system / permease component D5R55_RS33355 PF02653 Branched-chain amino acid transport system / permease component D5R55_RS33355 PF11862 Domain of unknown function (DUF3382) D5R55_RS33360 PF12399 Branched-chain amino acid ATP-binding cassette transporter D5R55_RS33360 PF00005 ABC transporter D5R55_RS33365 PF00005 ABC transporter D5R55_RS33375 PF00072 Response regulator receiver domain D5R55_RS33375 PF00196 Bacterial regulatory proteins, luxR family D5R55_RS33380 PF05247 Flagellar transcriptional activator (FlhD) D5R55_RS33385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS33385 PF09456 RcsC Alpha-Beta-Loop (ABL) D5R55_RS33385 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS33385 PF00072 Response regulator receiver domain D5R55_RS33405 PF00106 short chain dehydrogenase D5R55_RS33410 PF00202 Aminotransferase class-III D5R55_RS33415 PF03466 LysR substrate binding domain D5R55_RS33415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS33425 PF07690 Major Facilitator Superfamily D5R55_RS33430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS33430 PF03466 LysR substrate binding domain D5R55_RS33445 PF01810 LysE type translocator D5R55_RS33480 PF02954 Bacterial regulatory protein, Fis family D5R55_RS33480 PF00158 Sigma-54 interaction domain D5R55_RS33480 PF01590 GAF domain D5R55_RS33495 PF00860 Permease family D5R55_RS33535 PF00106 short chain dehydrogenase D5R55_RS33535 PF00561 alpha/beta hydrolase fold D5R55_RS33555 PF16200 C-terminal region of band_7 D5R55_RS33555 PF01145 SPFH domain / Band 7 family D5R55_RS33565 PF12833 Helix-turn-helix domain D5R55_RS33565 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term D5R55_RS33570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D5R55_RS33570 PF02770 Acyl-CoA dehydrogenase, middle domain D5R55_RS33570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D5R55_RS33575 PF13193 AMP-binding enzyme C-terminal domain D5R55_RS33575 PF00501 AMP-binding enzyme D5R55_RS33580 PF00171 Aldehyde dehydrogenase family D5R55_RS33585 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D5R55_RS33585 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D5R55_RS33590 PF00378 Enoyl-CoA hydratase/isomerase D5R55_RS33595 PF00378 Enoyl-CoA hydratase/isomerase D5R55_RS33600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS33600 PF03466 LysR substrate binding domain D5R55_RS33605 PF07690 Major Facilitator Superfamily D5R55_RS33610 PF02321 Outer membrane efflux protein D5R55_RS33615 PF00005 ABC transporter D5R55_RS33615 PF12704 MacB-like periplasmic core domain D5R55_RS33615 PF02687 FtsX-like permease family D5R55_RS33620 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D5R55_RS33670 PF02016 LD-carboxypeptidase N-terminal domain D5R55_RS33670 PF17676 LD-carboxypeptidase C-terminal domain D5R55_RS33680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS33680 PF03466 LysR substrate binding domain D5R55_RS33700 PF00440 Bacterial regulatory proteins, tetR family D5R55_RS33705 PF00561 alpha/beta hydrolase fold D5R55_RS33710 PF07690 Major Facilitator Superfamily D5R55_RS33715 PF04960 Glutaminase D5R55_RS33720 PF00486 Transcriptional regulatory protein, C terminal D5R55_RS33720 PF00072 Response regulator receiver domain D5R55_RS33725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS33725 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS33725 PF00672 HAMP domain D5R55_RS33730 PF01734 Patatin-like phospholipase D5R55_RS33760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS33760 PF03466 LysR substrate binding domain D5R55_RS33785 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS33785 PF08521 Two-component sensor kinase N-terminal D5R55_RS33785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS33790 PF00072 Response regulator receiver domain D5R55_RS33790 PF00486 Transcriptional regulatory protein, C terminal D5R55_RS33820 PF00067 Cytochrome P450 D5R55_RS33830 PF00581 Rhodanese-like domain D5R55_RS33835 PF01965 DJ-1/PfpI family D5R55_RS33840 PF03060 Nitronate monooxygenase D5R55_RS33850 PF02615 Malate/L-lactate dehydrogenase D5R55_RS33885 PF03466 LysR substrate binding domain D5R55_RS33885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS33890 PF00196 Bacterial regulatory proteins, luxR family D5R55_RS33890 PF03472 Autoinducer binding domain D5R55_RS33900 PF00793 DAHP synthetase I family D5R55_RS33905 PF00848 Ring hydroxylating alpha subunit (catalytic domain) D5R55_RS33905 PF00355 Rieske [2Fe-2S] domain D5R55_RS33910 PF13577 SnoaL-like domain D5R55_RS33915 PF00355 Rieske [2Fe-2S] domain D5R55_RS33925 PF07690 Major Facilitator Superfamily D5R55_RS33930 PF13533 Biotin-lipoyl like D5R55_RS33935 PF02321 Outer membrane efflux protein D5R55_RS33940 PF01202 Shikimate kinase D5R55_RS33950 PF00800 Prephenate dehydratase D5R55_RS33950 PF01817 Chorismate mutase type II D5R55_RS33950 PF01842 ACT domain D5R55_RS33955 PF03060 Nitronate monooxygenase D5R55_RS33965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D5R55_RS33965 PF02770 Acyl-CoA dehydrogenase, middle domain D5R55_RS33965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D5R55_RS33970 PF01266 FAD dependent oxidoreductase D5R55_RS33975 PF01381 Helix-turn-helix D5R55_RS33980 PF00120 Glutamine synthetase, catalytic domain D5R55_RS34010 PF00293 NUDIX domain D5R55_RS34010 PF01467 Cytidylyltransferase-like D5R55_RS34020 PF00155 Aminotransferase class I and II D5R55_RS34020 PF00392 Bacterial regulatory proteins, gntR family D5R55_RS34025 PF00892 EamA-like transporter family D5R55_RS34030 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D5R55_RS34030 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D5R55_RS34035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS34035 PF03466 LysR substrate binding domain D5R55_RS34050 PF13419 Haloacid dehalogenase-like hydrolase D5R55_RS34055 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system D5R55_RS34075 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain D5R55_RS34080 PF00231 ATP synthase D5R55_RS34085 PF01515 Phosphate acetyl/butaryl transferase D5R55_RS34090 PF00871 Acetokinase family D5R55_RS34095 PF00561 alpha/beta hydrolase fold D5R55_RS34105 PF06224 Winged helix DNA-binding domain D5R55_RS34115 PF01255 Putative undecaprenyl diphosphate synthase D5R55_RS34120 PF07690 Major Facilitator Superfamily D5R55_RS34125 PF01204 Trehalase D5R55_RS34155 PF00771 FHIPEP family D5R55_RS34160 PF01313 Bacterial export proteins, family 3 D5R55_RS34165 PF00263 Bacterial type II and III secretion system protein D5R55_RS34165 PF03958 Bacterial type II/III secretion system short domain D5R55_RS34185 PF01514 Secretory protein of YscJ/FliF family D5R55_RS34200 PF18269 T3SS EscN ATPase C-terminal domain D5R55_RS34200 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D5R55_RS34200 PF02874 ATP synthase alpha/beta family, beta-barrel domain D5R55_RS34210 PF01311 Bacterial export proteins, family 1 D5R55_RS34215 PF01312 FlhB HrpN YscU SpaS Family D5R55_RS34225 PF13537 Glutamine amidotransferase domain D5R55_RS34225 PF00733 Asparagine synthase D5R55_RS34235 PF01464 Transglycosylase SLT domain D5R55_RS34240 PF00813 FliP family D5R55_RS34250 PF00072 Response regulator receiver domain D5R55_RS34250 PF00486 Transcriptional regulatory protein, C terminal D5R55_RS34260 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D5R55_RS34265 PF00111 2Fe-2S iron-sulfur cluster binding domain D5R55_RS34265 PF01799 [2Fe-2S] binding domain D5R55_RS34270 PF12833 Helix-turn-helix domain D5R55_RS34270 PF06719 AraC-type transcriptional regulator N-terminus D5R55_RS34310 PF02954 Bacterial regulatory protein, Fis family D5R55_RS34310 PF00072 Response regulator receiver domain D5R55_RS34310 PF00158 Sigma-54 interaction domain D5R55_RS34335 PF02203 Tar ligand binding domain homologue D5R55_RS34335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5R55_RS34335 PF00672 HAMP domain D5R55_RS34340 PF08546 Ketopantoate reductase PanE/ApbA C terminal D5R55_RS34340 PF02558 Ketopantoate reductase PanE/ApbA D5R55_RS34350 PF13407 Periplasmic binding protein domain D5R55_RS34355 PF00005 ABC transporter D5R55_RS34360 PF02653 Branched-chain amino acid transport system / permease component D5R55_RS34365 PF08240 Alcohol dehydrogenase GroES-like domain D5R55_RS34365 PF00107 Zinc-binding dehydrogenase D5R55_RS34370 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D5R55_RS34370 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D5R55_RS34400 PF13640 2OG-Fe(II) oxygenase superfamily D5R55_RS34400 PF18331 PKHD-type hydroxylase C-terminal domain D5R55_RS34410 PF00593 TonB dependent receptor D5R55_RS34410 PF07715 TonB-dependent Receptor Plug Domain D5R55_RS34420 PF01850 PIN domain D5R55_RS34425 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D5R55_RS34425 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D5R55_RS34450 PF10703 MoaF N-terminal domain D5R55_RS34450 PF17409 MoaF C-terminal domain D5R55_RS34470 PF00486 Transcriptional regulatory protein, C terminal D5R55_RS34470 PF00072 Response regulator receiver domain D5R55_RS34475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS34475 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS34475 PF00672 HAMP domain D5R55_RS34480 PF06123 Inner membrane protein CreD D5R55_RS34485 PF00550 Phosphopantetheine attachment site D5R55_RS34485 PF16197 Ketoacyl-synthetase C-terminal extension D5R55_RS34485 PF00109 Beta-ketoacyl synthase, N-terminal domain D5R55_RS34485 PF08990 Erythronolide synthase docking D5R55_RS34485 PF02801 Beta-ketoacyl synthase, C-terminal domain D5R55_RS34485 PF08240 Alcohol dehydrogenase GroES-like domain D5R55_RS34485 PF14765 Polyketide synthase dehydratase D5R55_RS34485 PF00698 Acyl transferase domain D5R55_RS34485 PF09277 Erythronolide synthase, docking D5R55_RS34485 PF08659 KR domain D5R55_RS34495 PF07690 Major Facilitator Superfamily D5R55_RS34500 PF03466 LysR substrate binding domain D5R55_RS34500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS34525 PF00083 Sugar (and other) transporter D5R55_RS34535 PF03466 LysR substrate binding domain D5R55_RS34535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS34545 PF04228 Putative neutral zinc metallopeptidase D5R55_RS34550 PF00196 Bacterial regulatory proteins, luxR family D5R55_RS34555 PF00171 Aldehyde dehydrogenase family D5R55_RS34560 PF00202 Aminotransferase class-III D5R55_RS34590 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS34595 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS34600 PF00356 Bacterial regulatory proteins, lacI family D5R55_RS34610 PF01810 LysE type translocator D5R55_RS34615 PF00583 Acetyltransferase (GNAT) family D5R55_RS34620 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D5R55_RS34635 PF13419 Haloacid dehalogenase-like hydrolase D5R55_RS34655 PF00550 Phosphopantetheine attachment site D5R55_RS34655 PF14765 Polyketide synthase dehydratase D5R55_RS34655 PF16197 Ketoacyl-synthetase C-terminal extension D5R55_RS34655 PF08659 KR domain D5R55_RS34655 PF00698 Acyl transferase domain D5R55_RS34655 PF08240 Alcohol dehydrogenase GroES-like domain D5R55_RS34655 PF00109 Beta-ketoacyl synthase, N-terminal domain D5R55_RS34655 PF02801 Beta-ketoacyl synthase, C-terminal domain D5R55_RS34680 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS34685 PF00005 ABC transporter D5R55_RS34700 PF00375 Sodium:dicarboxylate symporter family D5R55_RS34710 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5R55_RS34715 PF00440 Bacterial regulatory proteins, tetR family D5R55_RS34720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS34720 PF03466 LysR substrate binding domain D5R55_RS34725 PF00106 short chain dehydrogenase D5R55_RS34730 PF09278 MerR, DNA binding D5R55_RS34730 PF00376 MerR family regulatory protein D5R55_RS34735 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D5R55_RS34740 PF00873 AcrB/AcrD/AcrF family D5R55_RS34745 PF02321 Outer membrane efflux protein D5R55_RS34750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS34750 PF03466 LysR substrate binding domain D5R55_RS34755 PF07690 Major Facilitator Superfamily D5R55_RS34760 PF07690 Major Facilitator Superfamily D5R55_RS34770 PF13609 Gram-negative porin D5R55_RS34775 PF01272 Transcription elongation factor, GreA/GreB, C-term D5R55_RS34775 PF03449 Transcription elongation factor, N-terminal D5R55_RS34785 PF00478 IMP dehydrogenase / GMP reductase domain D5R55_RS34785 PF00571 CBS domain D5R55_RS34790 PF00925 GTP cyclohydrolase II D5R55_RS34805 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) D5R55_RS34900 PF01610 Transposase D5R55_RS34900 PF13542 Helix-turn-helix domain of transposase family ISL3 D5R55_RS34900 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 D5R55_RS34915 PF13302 Acetyltransferase (GNAT) domain D5R55_RS34940 PF00765 Autoinducer synthase D5R55_RS34950 PF00196 Bacterial regulatory proteins, luxR family D5R55_RS34950 PF03472 Autoinducer binding domain D5R55_RS34955 PF02308 MgtC family D5R55_RS34970 PF04632 Fusaric acid resistance protein family D5R55_RS34975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D5R55_RS34975 PF00529 HlyD membrane-fusion protein of T1SS D5R55_RS34990 PF00149 Calcineurin-like phosphoesterase D5R55_RS35005 PF02501 Type II secretion system (T2SS), protein I D5R55_RS35005 PF07963 Prokaryotic N-terminal methylation motif D5R55_RS35010 PF11612 Type II secretion system (T2SS), protein J D5R55_RS35010 PF07963 Prokaryotic N-terminal methylation motif D5R55_RS35045 PF12849 PBP superfamily domain D5R55_RS35050 PF00482 Type II secretion system (T2SS), protein F D5R55_RS35060 PF07963 Prokaryotic N-terminal methylation motif D5R55_RS35060 PF08334 Type II secretion system (T2SS), protein G D5R55_RS35065 PF12019 Type II transport protein GspH D5R55_RS35065 PF07963 Prokaryotic N-terminal methylation motif D5R55_RS35100 PF03934 Type II secretion system (T2SS), protein K D5R55_RS35125 PF01618 MotA/TolQ/ExbB proton channel family D5R55_RS35130 PF02472 Biopolymer transport protein ExbD/TolR D5R55_RS35170 PF13180 PDZ domain D5R55_RS35185 PF01614 Bacterial transcriptional regulator D5R55_RS35185 PF09339 IclR helix-turn-helix domain D5R55_RS35190 PF13609 Gram-negative porin D5R55_RS35195 PF00355 Rieske [2Fe-2S] domain D5R55_RS35205 PF00355 Rieske [2Fe-2S] domain D5R55_RS35220 PF08241 Methyltransferase domain D5R55_RS35220 PF12697 Alpha/beta hydrolase family D5R55_RS35225 PF01614 Bacterial transcriptional regulator D5R55_RS35225 PF09339 IclR helix-turn-helix domain D5R55_RS35235 PF00205 Thiamine pyrophosphate enzyme, central domain D5R55_RS35235 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D5R55_RS35235 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D5R55_RS35240 PF03447 Homoserine dehydrogenase, NAD binding domain D5R55_RS35240 PF01958 Domain of unknown function DUF108 D5R55_RS35245 PF00171 Aldehyde dehydrogenase family D5R55_RS35255 PF14759 Reductase C-terminal D5R55_RS35255 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5R55_RS35260 PF00083 Sugar (and other) transporter D5R55_RS35265 PF13302 Acetyltransferase (GNAT) domain D5R55_RS35270 PF00132 Bacterial transferase hexapeptide (six repeats) D5R55_RS35270 PF03479 Plants and Prokaryotes Conserved (PCC) domain D5R55_RS35270 PF12804 MobA-like NTP transferase domain D5R55_RS35275 PF00330 Aconitase family (aconitate hydratase) D5R55_RS35275 PF06434 Aconitate hydratase 2 N-terminus D5R55_RS35275 PF11791 Aconitate B N-terminal domain D5R55_RS35300 PF01425 Amidase D5R55_RS35310 PF00797 N-acetyltransferase D5R55_RS35340 PF04072 Leucine carboxyl methyltransferase D5R55_RS35345 PF05088 Bacterial NAD-glutamate dehydrogenase D5R55_RS35350 PF01361 Tautomerase enzyme D5R55_RS35355 PF00596 Class II Aldolase and Adducin N-terminal domain D5R55_RS35370 PF00561 alpha/beta hydrolase fold D5R55_RS35380 PF00106 short chain dehydrogenase D5R55_RS35385 PF00743 Flavin-binding monooxygenase-like D5R55_RS35390 PF07947 YhhN family D5R55_RS35395 PF00491 Arginase family D5R55_RS35400 PF09084 NMT1/THI5 like D5R55_RS35410 PF00313 'Cold-shock' DNA-binding domain D5R55_RS35425 PF12833 Helix-turn-helix domain D5R55_RS35430 PF07690 Major Facilitator Superfamily D5R55_RS35435 PF13609 Gram-negative porin D5R55_RS35440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS35440 PF03466 LysR substrate binding domain D5R55_RS35445 PF08240 Alcohol dehydrogenase GroES-like domain D5R55_RS35445 PF00107 Zinc-binding dehydrogenase D5R55_RS35450 PF07690 Major Facilitator Superfamily D5R55_RS35455 PF00672 HAMP domain D5R55_RS35455 PF02203 Tar ligand binding domain homologue D5R55_RS35455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5R55_RS35495 PF07885 Ion channel D5R55_RS35495 PF02254 TrkA-N domain D5R55_RS35500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS35500 PF03466 LysR substrate binding domain D5R55_RS35505 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D5R55_RS35505 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D5R55_RS35510 PF00171 Aldehyde dehydrogenase family D5R55_RS35520 PF07687 Peptidase dimerisation domain D5R55_RS35520 PF01546 Peptidase family M20/M25/M40 D5R55_RS35530 PF03442 Carbohydrate binding domain X2 D5R55_RS35530 PF00942 Cellulose binding domain D5R55_RS35535 PF01464 Transglycosylase SLT domain D5R55_RS35535 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5R55_RS35540 PF07690 Major Facilitator Superfamily D5R55_RS35545 PF02615 Malate/L-lactate dehydrogenase D5R55_RS35550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS35550 PF03466 LysR substrate binding domain D5R55_RS35560 PF01037 Lrp/AsnC ligand binding domain D5R55_RS35565 PF01063 Amino-transferase class IV D5R55_RS35575 PF00990 Diguanylate cyclase, GGDEF domain D5R55_RS35575 PF00072 Response regulator receiver domain D5R55_RS35580 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS35580 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5R55_RS35580 PF00072 Response regulator receiver domain D5R55_RS35580 PF01627 Hpt domain D5R55_RS35580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS35590 PF02653 Branched-chain amino acid transport system / permease component D5R55_RS35590 PF11862 Domain of unknown function (DUF3382) D5R55_RS35600 PF00005 ABC transporter D5R55_RS35600 PF12399 Branched-chain amino acid ATP-binding cassette transporter D5R55_RS35605 PF00005 ABC transporter D5R55_RS35610 PF03069 Acetamidase/Formamidase family D5R55_RS35620 PF00795 Carbon-nitrogen hydrolase D5R55_RS35645 PF02321 Outer membrane efflux protein D5R55_RS35655 PF00873 AcrB/AcrD/AcrF family D5R55_RS35675 PF00440 Bacterial regulatory proteins, tetR family D5R55_RS35680 PF00816 H-NS histone family D5R55_RS35695 PF03466 LysR substrate binding domain D5R55_RS35695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS35700 PF01494 FAD binding domain D5R55_RS35705 PF00756 Putative esterase D5R55_RS35715 PF13609 Gram-negative porin D5R55_RS35720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS35720 PF03466 LysR substrate binding domain D5R55_RS35725 PF00248 Aldo/keto reductase family D5R55_RS35745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS35745 PF03466 LysR substrate binding domain D5R55_RS35750 PF01476 LysM domain D5R55_RS35750 PF01551 Peptidase family M23 D5R55_RS35760 PF03466 LysR substrate binding domain D5R55_RS35760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS35775 PF13953 PapC C-terminal domain D5R55_RS35775 PF00577 Outer membrane usher protein D5R55_RS35775 PF13954 PapC N-terminal domain D5R55_RS35780 PF02753 Pili assembly chaperone PapD, C-terminal domain D5R55_RS35780 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D5R55_RS35785 PF00419 Fimbrial protein D5R55_RS35795 PF04226 Transglycosylase associated protein D5R55_RS35800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D5R55_RS35800 PF00005 ABC transporter D5R55_RS35805 PF00005 ABC transporter D5R55_RS35805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D5R55_RS35810 PF12911 N-terminal TM domain of oligopeptide transport permease C D5R55_RS35810 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS35815 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS35820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D5R55_RS35825 PF01427 D-ala-D-ala dipeptidase D5R55_RS35835 PF00190 Cupin D5R55_RS35840 PF01566 Natural resistance-associated macrophage protein D5R55_RS35845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D5R55_RS35865 PF00384 Molybdopterin oxidoreductase D5R55_RS35875 PF00392 Bacterial regulatory proteins, gntR family D5R55_RS35875 PF00155 Aminotransferase class I and II D5R55_RS35885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS35885 PF03466 LysR substrate binding domain D5R55_RS35895 PF07690 Major Facilitator Superfamily D5R55_RS35900 PF00857 Isochorismatase family D5R55_RS35915 PF00768 D-alanyl-D-alanine carboxypeptidase D5R55_RS35925 PF03466 LysR substrate binding domain D5R55_RS35925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS35935 PF12697 Alpha/beta hydrolase family D5R55_RS35940 PF00689 Cation transporting ATPase, C-terminus D5R55_RS35940 PF00690 Cation transporter/ATPase, N-terminus D5R55_RS35955 PF04151 Bacterial pre-peptidase C-terminal domain D5R55_RS35955 PF00082 Subtilase family D5R55_RS35965 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5R55_RS35975 PF00392 Bacterial regulatory proteins, gntR family D5R55_RS35975 PF07702 UTRA domain D5R55_RS35990 PF07690 Major Facilitator Superfamily D5R55_RS35995 PF13302 Acetyltransferase (GNAT) domain D5R55_RS36005 PF00912 Transglycosylase D5R55_RS36005 PF00905 Penicillin binding protein transpeptidase domain D5R55_RS36010 PF00207 Alpha-2-macroglobulin family D5R55_RS36010 PF07703 Alpha-2-macroglobulin bait region domain D5R55_RS36010 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain D5R55_RS36010 PF01835 MG2 domain D5R55_RS36030 PF05199 GMC oxidoreductase D5R55_RS36030 PF00732 GMC oxidoreductase D5R55_RS36035 PF00034 Cytochrome c D5R55_RS36035 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D5R55_RS36040 PF07681 DoxX D5R55_RS36045 PF13609 Gram-negative porin D5R55_RS36050 PF06715 Gp5 C-terminal repeat (3 copies) D5R55_RS36050 PF04717 Type VI secretion system, phage-baseplate injector D5R55_RS36085 PF07690 Major Facilitator Superfamily D5R55_RS36090 PF01546 Peptidase family M20/M25/M40 D5R55_RS36090 PF07687 Peptidase dimerisation domain D5R55_RS36095 PF03466 LysR substrate binding domain D5R55_RS36095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS36100 PF06865 Pyrimidine/purine nucleoside phosphorylase D5R55_RS36120 PF00571 CBS domain D5R55_RS36120 PF00478 IMP dehydrogenase / GMP reductase domain D5R55_RS36125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS36125 PF03466 LysR substrate binding domain D5R55_RS36130 PF07690 Major Facilitator Superfamily D5R55_RS36135 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D5R55_RS36135 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D5R55_RS36140 PF03466 LysR substrate binding domain D5R55_RS36140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS36155 PF01699 Sodium/calcium exchanger protein D5R55_RS36160 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain D5R55_RS36160 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D5R55_RS36160 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D5R55_RS36165 PF00501 AMP-binding enzyme D5R55_RS36165 PF14535 AMP-binding enzyme C-terminal domain D5R55_RS36170 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D5R55_RS36170 PF00378 Enoyl-CoA hydratase/isomerase D5R55_RS36170 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D5R55_RS36180 PF00248 Aldo/keto reductase family D5R55_RS36195 PF08240 Alcohol dehydrogenase GroES-like domain D5R55_RS36195 PF00107 Zinc-binding dehydrogenase D5R55_RS36220 PF00392 Bacterial regulatory proteins, gntR family D5R55_RS36220 PF00155 Aminotransferase class I and II D5R55_RS36240 PF17820 PDZ domain D5R55_RS36240 PF13180 PDZ domain D5R55_RS36245 PF07690 Major Facilitator Superfamily D5R55_RS36255 PF01557 Fumarylacetoacetate (FAA) hydrolase family D5R55_RS36265 PF03167 Uracil DNA glycosylase superfamily D5R55_RS36270 PF00005 ABC transporter D5R55_RS36275 PF08376 Nitrate and nitrite sensing D5R55_RS36275 PF03861 ANTAR domain D5R55_RS36280 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D5R55_RS36295 PF18267 Rubredoxin NAD+ reductase C-terminal domain D5R55_RS36295 PF07992 Pyridine nucleotide-disulphide oxidoreductase D5R55_RS36295 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D5R55_RS36295 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D5R55_RS36295 PF04324 BFD-like [2Fe-2S] binding domain D5R55_RS36300 PF13806 Rieske-like [2Fe-2S] domain D5R55_RS36305 PF01568 Molydopterin dinucleotide binding domain D5R55_RS36305 PF00384 Molybdopterin oxidoreductase D5R55_RS36305 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D5R55_RS36315 PF03928 Haem-degrading D5R55_RS36320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS36320 PF03466 LysR substrate binding domain D5R55_RS36335 PF03706 Lysylphosphatidylglycerol synthase TM region D5R55_RS36335 PF09924 Uncharacterised conserved protein (DUF2156) D5R55_RS36355 PF00392 Bacterial regulatory proteins, gntR family D5R55_RS36355 PF00155 Aminotransferase class I and II D5R55_RS36360 PF13416 Bacterial extracellular solute-binding protein D5R55_RS36365 PF00990 Diguanylate cyclase, GGDEF domain D5R55_RS36365 PF03707 Bacterial signalling protein N terminal repeat D5R55_RS36365 PF13188 PAS domain D5R55_RS36365 PF00563 EAL domain D5R55_RS36380 PF03466 LysR substrate binding domain D5R55_RS36380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS36385 PF01810 LysE type translocator D5R55_RS36390 PF00892 EamA-like transporter family D5R55_RS36400 PF16656 Purple acid Phosphatase, N-terminal domain D5R55_RS36400 PF00149 Calcineurin-like phosphoesterase D5R55_RS36415 PF08281 Sigma-70, region 4 D5R55_RS36415 PF04542 Sigma-70 region 2 D5R55_RS36445 PF00589 Phage integrase family D5R55_RS36445 PF02899 Phage integrase, N-terminal SAM-like domain D5R55_RS36455 PF07690 Major Facilitator Superfamily D5R55_RS36470 PF01850 PIN domain D5R55_RS36475 PF00313 'Cold-shock' DNA-binding domain D5R55_RS36485 PF01176 Translation initiation factor 1A / IF-1 D5R55_RS36505 PF04185 Phosphoesterase family D5R55_RS36505 PF05506 Domain of unknown function (DUF756) D5R55_RS36545 PF01037 Lrp/AsnC ligand binding domain D5R55_RS36560 PF07859 alpha/beta hydrolase fold D5R55_RS36570 PF07715 TonB-dependent Receptor Plug Domain D5R55_RS36570 PF00593 TonB dependent receptor D5R55_RS36580 PF00291 Pyridoxal-phosphate dependent enzyme D5R55_RS36590 PF04073 Aminoacyl-tRNA editing domain D5R55_RS36595 PF00463 Isocitrate lyase family D5R55_RS36605 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain D5R55_RS36605 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain D5R55_RS36620 PF00004 ATPase family associated with various cellular activities (AAA) D5R55_RS36620 PF17862 AAA+ lid domain D5R55_RS36620 PF01434 Peptidase family M41 D5R55_RS36625 PF00982 Glycosyltransferase family 20 D5R55_RS36630 PF00593 TonB dependent receptor D5R55_RS36630 PF07715 TonB-dependent Receptor Plug Domain D5R55_RS36635 PF00107 Zinc-binding dehydrogenase D5R55_RS36635 PF08240 Alcohol dehydrogenase GroES-like domain D5R55_RS36650 PF01047 MarR family D5R55_RS36660 PF09084 NMT1/THI5 like D5R55_RS36665 PF00296 Luciferase-like monooxygenase D5R55_RS36675 PF00005 ABC transporter D5R55_RS36680 PF00296 Luciferase-like monooxygenase D5R55_RS36685 PF00296 Luciferase-like monooxygenase D5R55_RS36690 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5R55_RS36700 PF04381 Putative exonuclease, RdgC D5R55_RS36705 PF12833 Helix-turn-helix domain D5R55_RS36705 PF02311 AraC-like ligand binding domain D5R55_RS36740 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family D5R55_RS36750 PF00563 EAL domain D5R55_RS36750 PF00990 Diguanylate cyclase, GGDEF domain D5R55_RS36750 PF03707 Bacterial signalling protein N terminal repeat D5R55_RS36770 PF00111 2Fe-2S iron-sulfur cluster binding domain D5R55_RS36770 PF01799 [2Fe-2S] binding domain D5R55_RS36775 PF00034 Cytochrome c D5R55_RS36775 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D5R55_RS36780 PF00691 OmpA family D5R55_RS36790 PF13609 Gram-negative porin D5R55_RS36825 PF00199 Catalase D5R55_RS36825 PF06628 Catalase-related immune-responsive D5R55_RS36835 PF00561 alpha/beta hydrolase fold D5R55_RS36840 PF00698 Acyl transferase domain D5R55_RS36840 PF08240 Alcohol dehydrogenase GroES-like domain D5R55_RS36840 PF14765 Polyketide synthase dehydratase D5R55_RS36840 PF00109 Beta-ketoacyl synthase, N-terminal domain D5R55_RS36840 PF02801 Beta-ketoacyl synthase, C-terminal domain D5R55_RS36840 PF16197 Ketoacyl-synthetase C-terminal extension D5R55_RS36840 PF08659 KR domain D5R55_RS36840 PF00550 Phosphopantetheine attachment site D5R55_RS36845 PF00490 Delta-aminolevulinic acid dehydratase D5R55_RS36850 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D5R55_RS36855 PF00141 Peroxidase D5R55_RS36860 PF00561 alpha/beta hydrolase fold D5R55_RS36865 PF00376 MerR family regulatory protein D5R55_RS36865 PF09278 MerR, DNA binding D5R55_RS36875 PF00376 MerR family regulatory protein D5R55_RS36875 PF09278 MerR, DNA binding D5R55_RS36895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS36895 PF03466 LysR substrate binding domain D5R55_RS36905 PF00364 Biotin-requiring enzyme D5R55_RS36905 PF00682 HMGL-like D5R55_RS36905 PF02436 Conserved carboxylase domain D5R55_RS36910 PF00364 Biotin-requiring enzyme D5R55_RS36915 PF02785 Biotin carboxylase C-terminal domain D5R55_RS36915 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D5R55_RS36915 PF00289 Biotin carboxylase, N-terminal domain D5R55_RS36925 PF00474 Sodium:solute symporter family D5R55_RS36935 PF00440 Bacterial regulatory proteins, tetR family D5R55_RS36950 PF01799 [2Fe-2S] binding domain D5R55_RS36950 PF00111 2Fe-2S iron-sulfur cluster binding domain D5R55_RS36955 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D5R55_RS36970 PF07929 Plasmid pRiA4b ORF-3-like protein D5R55_RS36980 PF01734 Patatin-like phospholipase D5R55_RS36990 PF00171 Aldehyde dehydrogenase family D5R55_RS36995 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D5R55_RS36995 PF00034 Cytochrome c D5R55_RS37000 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D5R55_RS37005 PF00111 2Fe-2S iron-sulfur cluster binding domain D5R55_RS37005 PF01799 [2Fe-2S] binding domain D5R55_RS37015 PF00107 Zinc-binding dehydrogenase D5R55_RS37015 PF16884 N-terminal domain of oxidoreductase D5R55_RS37020 PF00440 Bacterial regulatory proteins, tetR family D5R55_RS37020 PF16925 Tetracyclin repressor-like, C-terminal domain D5R55_RS37050 PF07804 HipA-like C-terminal domain D5R55_RS37050 PF13657 HipA N-terminal domain D5R55_RS37055 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D5R55_RS37065 PF07690 Major Facilitator Superfamily D5R55_RS37065 PF00083 Sugar (and other) transporter D5R55_RS37070 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D5R55_RS37080 PF01614 Bacterial transcriptional regulator D5R55_RS37080 PF09339 IclR helix-turn-helix domain D5R55_RS37090 PF08774 VRR-NUC domain D5R55_RS37090 PF18081 Fanconi anemia-associated nuclease SAP domain D5R55_RS37135 PF01627 Hpt domain D5R55_RS37135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D5R55_RS37135 PF00497 Bacterial extracellular solute-binding proteins, family 3 D5R55_RS37135 PF00072 Response regulator receiver domain D5R55_RS37135 PF00512 His Kinase A (phospho-acceptor) domain D5R55_RS37145 PF00672 HAMP domain D5R55_RS37145 PF02743 Cache domain D5R55_RS37145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5R55_RS37165 PF00324 Amino acid permease D5R55_RS37180 PF00582 Universal stress protein family D5R55_RS37185 PF07730 Histidine kinase D5R55_RS37185 PF17200 Single Cache domain 2 D5R55_RS37190 PF00072 Response regulator receiver domain D5R55_RS37190 PF00196 Bacterial regulatory proteins, luxR family D5R55_RS37210 PF17092 Penicillin-binding protein OB-like domain D5R55_RS37210 PF00912 Transglycosylase D5R55_RS37210 PF00905 Penicillin binding protein transpeptidase domain D5R55_RS37215 PF05544 Proline racemase D5R55_RS37220 PF13458 Periplasmic binding protein D5R55_RS37225 PF07729 FCD domain D5R55_RS37225 PF00392 Bacterial regulatory proteins, gntR family D5R55_RS37230 PF02423 Ornithine cyclodeaminase/mu-crystallin family D5R55_RS37235 PF00072 Response regulator receiver domain D5R55_RS37235 PF02954 Bacterial regulatory protein, Fis family D5R55_RS37240 PF00027 Cyclic nucleotide-binding domain D5R55_RS37240 PF13545 Crp-like helix-turn-helix domain D5R55_RS37265 PF00155 Aminotransferase class I and II D5R55_RS37270 PF00324 Amino acid permease D5R55_RS37275 PF01037 Lrp/AsnC ligand binding domain D5R55_RS37285 PF05506 Domain of unknown function (DUF756) D5R55_RS37285 PF04185 Phosphoesterase family D5R55_RS37290 PF03150 Di-haem cytochrome c peroxidase D5R55_RS37290 PF00034 Cytochrome c D5R55_RS37290 PF14376 Haem-binding domain D5R55_RS37300 PF01266 FAD dependent oxidoreductase D5R55_RS37305 PF00005 ABC transporter D5R55_RS37310 PF00528 Binding-protein-dependent transport system inner membrane component D5R55_RS37350 PF07690 Major Facilitator Superfamily D5R55_RS37370 PF00654 Voltage gated chloride channel D5R55_RS37375 PF07969 Amidohydrolase family D5R55_RS37385 PF13609 Gram-negative porin D5R55_RS37395 PF03466 LysR substrate binding domain D5R55_RS37395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS37400 PF04632 Fusaric acid resistance protein family D5R55_RS37410 PF03576 Peptidase family S58 D5R55_RS37435 PF00067 Cytochrome P450 D5R55_RS37440 PF12833 Helix-turn-helix domain D5R55_RS37450 PF00171 Aldehyde dehydrogenase family D5R55_RS37455 PF00202 Aminotransferase class-III D5R55_RS37460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D5R55_RS37460 PF03466 LysR substrate binding domain D5R55_RS37490 PF12833 Helix-turn-helix domain D5R55_RS37495 PF00106 short chain dehydrogenase D5R55_RS37500 PF07690 Major Facilitator Superfamily D5R55_RS37505 PF07690 Major Facilitator Superfamily D5R55_RS37530 PF01810 LysE type translocator D5R55_RS37535 PF09335 SNARE associated Golgi protein D5R55_RS37540 PF02203 Tar ligand binding domain homologue D5R55_RS37540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D5R55_RS37540 PF00672 HAMP domain D5R55_RS37545 PF00501 AMP-binding enzyme D5R55_RS37545 PF13193 AMP-binding enzyme C-terminal domain D5R55_RS37550 PF00027 Cyclic nucleotide-binding domain D5R55_RS37550 PF13545 Crp-like helix-turn-helix domain D5R55_RS37555 PF00873 AcrB/AcrD/AcrF family D5R55_RS37560 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion