locus-tag class description DM42_RS00065 PF00072 Response regulator receiver domain DM42_RS00065 PF00196 Bacterial regulatory proteins, luxR family DM42_RS00115 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DM42_RS00250 PF00501 AMP-binding enzyme DM42_RS00250 PF13193 AMP-binding enzyme C-terminal domain DM42_RS00250 PF00550 Phosphopantetheine attachment site DM42_RS00250 PF07993 Male sterility protein DM42_RS00250 PF00668 Condensation domain DM42_RS00450 PF16591 Helical bimodular sensor domain DM42_RS00450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DM42_RS00450 PF00672 HAMP domain DM42_RS00460 PF00294 pfkB family carbohydrate kinase DM42_RS00630 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DM42_RS00890 PF02321 Outer membrane efflux protein DM42_RS01120 PF07690 Major Facilitator Superfamily DM42_RS01190 PF00580 UvrD/REP helicase N-terminal domain DM42_RS01190 PF13361 UvrD-like helicase C-terminal domain DM42_RS01205 PF08264 Anticodon-binding domain of tRNA DM42_RS01205 PF10458 Valyl tRNA synthetase tRNA binding arm DM42_RS01205 PF00133 tRNA synthetases class I (I, L, M and V) DM42_RS01225 PF00512 His Kinase A (phospho-acceptor) domain DM42_RS01225 PF00672 HAMP domain DM42_RS01225 PF00989 PAS fold DM42_RS01225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM42_RS01530 PF03552 Cellulose synthase DM42_RS01530 PF07238 PilZ domain DM42_RS01530 PF00535 Glycosyl transferase family 2 DM42_RS01575 PF03170 Bacterial cellulose synthase subunit DM42_RS01690 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) DM42_RS01690 PF04717 Type VI secretion system, phage-baseplate injector DM42_RS01690 PF13296 Putative type VI secretion system Rhs element Vgr DM42_RS01860 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DM42_RS02025 PF02673 Bacitracin resistance protein BacA DM42_RS02520 PF00873 AcrB/AcrD/AcrF family DM42_RS02560 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DM42_RS02735 PF13673 Acetyltransferase (GNAT) domain DM42_RS03185 PF00004 ATPase family associated with various cellular activities (AAA) DM42_RS03185 PF16193 AAA C-terminal domain DM42_RS03185 PF12002 MgsA AAA+ ATPase C terminal DM42_RS03265 PF08240 Alcohol dehydrogenase GroES-like domain DM42_RS03400 PF01479 S4 domain DM42_RS03400 PF00849 RNA pseudouridylate synthase DM42_RS03440 PF02646 RmuC family DM42_RS03600 PF03193 RsgA GTPase DM42_RS03710 PF00294 pfkB family carbohydrate kinase DM42_RS04000 PF02824 TGS domain DM42_RS04000 PF04607 Region found in RelA / SpoT proteins DM42_RS04000 PF13291 ACT domain DM42_RS04105 PF00487 Fatty acid desaturase DM42_RS04130 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DM42_RS04130 PF01580 FtsK/SpoIIIE family DM42_RS04130 PF17854 FtsK alpha domain DM42_RS04130 PF09397 Ftsk gamma domain DM42_RS04180 PF07690 Major Facilitator Superfamily DM42_RS04335 PF06969 HemN C-terminal domain DM42_RS04335 PF04055 Radical SAM superfamily DM42_RS04465 PF00953 Glycosyl transferase family 4 DM42_RS04485 PF01050 Mannose-6-phosphate isomerase DM42_RS04485 PF00483 Nucleotidyl transferase DM42_RS04850 PF14765 Polyketide synthase dehydratase DM42_RS04850 PF00550 Phosphopantetheine attachment site DM42_RS04850 PF16197 Ketoacyl-synthetase C-terminal extension DM42_RS04850 PF02801 Beta-ketoacyl synthase, C-terminal domain DM42_RS04850 PF00109 Beta-ketoacyl synthase, N-terminal domain DM42_RS04850 PF08240 Alcohol dehydrogenase GroES-like domain DM42_RS04850 PF00698 Acyl transferase domain DM42_RS04850 PF08659 KR domain DM42_RS04870 PF00109 Beta-ketoacyl synthase, N-terminal domain DM42_RS04870 PF16197 Ketoacyl-synthetase C-terminal extension DM42_RS04870 PF02801 Beta-ketoacyl synthase, C-terminal domain DM42_RS04870 PF00550 Phosphopantetheine attachment site DM42_RS04870 PF08659 KR domain DM42_RS04870 PF00698 Acyl transferase domain DM42_RS04925 PF00535 Glycosyl transferase family 2 DM42_RS04945 PF00535 Glycosyl transferase family 2 DM42_RS05170 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DM42_RS05190 PF02514 CobN/Magnesium Chelatase DM42_RS05195 PF02514 CobN/Magnesium Chelatase DM42_RS05445 PF02321 Outer membrane efflux protein DM42_RS05495 PF00083 Sugar (and other) transporter DM42_RS05555 PF00005 ABC transporter DM42_RS05710 PF00296 Luciferase-like monooxygenase DM42_RS05865 PF02954 Bacterial regulatory protein, Fis family DM42_RS05865 PF06490 Flagellar regulatory protein FleQ DM42_RS05865 PF00158 Sigma-54 interaction domain DM42_RS06055 PF01479 S4 domain DM42_RS06055 PF00849 RNA pseudouridylate synthase DM42_RS06130 PF01588 Putative tRNA binding domain DM42_RS06130 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DM42_RS06130 PF03147 Ferredoxin-fold anticodon binding domain DM42_RS06130 PF03483 B3/4 domain DM42_RS06130 PF03484 tRNA synthetase B5 domain DM42_RS06145 PF02824 TGS domain DM42_RS06145 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DM42_RS06145 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DM42_RS06145 PF03129 Anticodon binding domain DM42_RS06405 PF02272 DHHA1 domain DM42_RS06405 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DM42_RS06405 PF01411 tRNA synthetases class II (A) DM42_RS06530 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) DM42_RS06585 PF12146 Serine aminopeptidase, S33 DM42_RS06585 PF12147 Putative methyltransferase DM42_RS07005 PF02673 Bacitracin resistance protein BacA DM42_RS07090 PF00809 Pterin binding enzyme DM42_RS07145 PF01476 LysM domain DM42_RS07145 PF01464 Transglycosylase SLT domain DM42_RS07230 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DM42_RS07230 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DM42_RS07450 PF13538 UvrD-like helicase C-terminal domain DM42_RS07460 PF00580 UvrD/REP helicase N-terminal domain DM42_RS07460 PF13361 UvrD-like helicase C-terminal domain DM42_RS07460 PF12705 PD-(D/E)XK nuclease superfamily DM42_RS07475 PF00580 UvrD/REP helicase N-terminal domain DM42_RS07475 PF13361 UvrD-like helicase C-terminal domain DM42_RS07475 PF12705 PD-(D/E)XK nuclease superfamily DM42_RS07490 PF17946 RecC C-terminal domain DM42_RS07745 PF00990 Diguanylate cyclase, GGDEF domain DM42_RS07745 PF13188 PAS domain DM42_RS07745 PF00563 EAL domain DM42_RS07745 PF03707 Bacterial signalling protein N terminal repeat DM42_RS07795 PF04958 Arginine N-succinyltransferase beta subunit DM42_RS08145 PF00580 UvrD/REP helicase N-terminal domain DM42_RS08145 PF13361 UvrD-like helicase C-terminal domain DM42_RS08415 PF01590 GAF domain DM42_RS08415 PF02954 Bacterial regulatory protein, Fis family DM42_RS08415 PF00158 Sigma-54 interaction domain DM42_RS08540 PF00849 RNA pseudouridylate synthase DM42_RS08540 PF01479 S4 domain DM42_RS08545 PF10150 Ribonuclease E/G family DM42_RS08545 PF12111 Polyribonucleotide phosphorylase C terminal DM42_RS08545 PF00575 S1 RNA binding domain DM42_RS08685 PF01523 Putative modulator of DNA gyrase DM42_RS08775 PF00850 Histone deacetylase domain DM42_RS08785 PF00291 Pyridoxal-phosphate dependent enzyme DM42_RS08815 PF00575 S1 RNA binding domain DM42_RS08825 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DM42_RS08845 PF00266 Aminotransferase class-V DM42_RS08930 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DM42_RS08930 PF00037 4Fe-4S binding domain DM42_RS08930 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DM42_RS08930 PF00384 Molybdopterin oxidoreductase DM42_RS08930 PF01568 Molydopterin dinucleotide binding domain DM42_RS09130 PF06715 Gp5 C-terminal repeat (3 copies) DM42_RS09130 PF04717 Type VI secretion system, phage-baseplate injector DM42_RS09150 PF00654 Voltage gated chloride channel DM42_RS09210 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DM42_RS09210 PF17854 FtsK alpha domain DM42_RS09210 PF09397 Ftsk gamma domain DM42_RS09210 PF01580 FtsK/SpoIIIE family DM42_RS09460 PF08402 TOBE domain DM42_RS09460 PF00005 ABC transporter DM42_RS09485 PF01979 Amidohydrolase family DM42_RS09485 PF00449 Urease alpha-subunit, N-terminal domain DM42_RS09570 PF00534 Glycosyl transferases group 1 DM42_RS09570 PF13439 Glycosyltransferase Family 4 DM42_RS09630 PF00534 Glycosyl transferases group 1 DM42_RS09630 PF13439 Glycosyltransferase Family 4 DM42_RS09955 PF01494 FAD binding domain DM42_RS10080 PF00550 Phosphopantetheine attachment site DM42_RS10080 PF00698 Acyl transferase domain DM42_RS10080 PF08240 Alcohol dehydrogenase GroES-like domain DM42_RS10080 PF08990 Erythronolide synthase docking DM42_RS10080 PF09277 Erythronolide synthase, docking DM42_RS10080 PF16197 Ketoacyl-synthetase C-terminal extension DM42_RS10080 PF02801 Beta-ketoacyl synthase, C-terminal domain DM42_RS10080 PF14765 Polyketide synthase dehydratase DM42_RS10080 PF08659 KR domain DM42_RS10080 PF00109 Beta-ketoacyl synthase, N-terminal domain DM42_RS10085 PF00698 Acyl transferase domain DM42_RS10085 PF08990 Erythronolide synthase docking DM42_RS10085 PF08659 KR domain DM42_RS10085 PF02801 Beta-ketoacyl synthase, C-terminal domain DM42_RS10085 PF16197 Ketoacyl-synthetase C-terminal extension DM42_RS10085 PF00109 Beta-ketoacyl synthase, N-terminal domain DM42_RS10085 PF00550 Phosphopantetheine attachment site DM42_RS10085 PF00975 Thioesterase domain DM42_RS10335 PF04715 Anthranilate synthase component I, N terminal region DM42_RS10335 PF00425 chorismate binding enzyme DM42_RS10335 PF00117 Glutamine amidotransferase class-I DM42_RS10350 PF00012 Hsp70 protein DM42_RS10355 PF00012 Hsp70 protein DM42_RS10380 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding DM42_RS10380 PF01628 HrcA protein C terminal domain DM42_RS10470 PF01565 FAD binding domain DM42_RS10470 PF02913 FAD linked oxidases, C-terminal domain DM42_RS10485 PF13183 4Fe-4S dicluster domain DM42_RS10485 PF02754 Cysteine-rich domain DM42_RS10515 PF00141 Peroxidase DM42_RS10530 PF03466 LysR substrate binding domain DM42_RS10530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS10540 PF00270 DEAD/DEAH box helicase DM42_RS10540 PF17191 RecG wedge domain DM42_RS10540 PF00271 Helicase conserved C-terminal domain DM42_RS10560 PF13721 SecD export protein N-terminal TM region DM42_RS10560 PF07549 SecD/SecF GG Motif DM42_RS10560 PF02355 Protein export membrane protein DM42_RS10835 PF00890 FAD binding domain DM42_RS10835 PF02910 Fumarate reductase flavoprotein C-term DM42_RS10935 PF00375 Sodium:dicarboxylate symporter family DM42_RS10995 PF17284 Spermidine synthase tetramerisation domain DM42_RS11305 PF01121 Dephospho-CoA kinase DM42_RS11430 PF00905 Penicillin binding protein transpeptidase domain DM42_RS11430 PF03717 Penicillin-binding Protein dimerisation domain DM42_RS11680 PF03462 PCRF domain DM42_RS11680 PF00472 RF-1 domain DM42_RS11790 PF14331 ImcF-related N-terminal domain DM42_RS11790 PF06761 Intracellular multiplication and human macrophage-killing DM42_RS11790 PF06744 Type VI secretion protein IcmF C-terminal DM42_RS12020 PF02405 Permease MlaE DM42_RS12165 PF11741 AMIN domain DM42_RS12165 PF03958 Bacterial type II/III secretion system short domain DM42_RS12165 PF07660 Secretin and TonB N terminus short domain DM42_RS12165 PF00263 Bacterial type II and III secretion system protein DM42_RS12350 PF04997 RNA polymerase Rpb1, domain 1 DM42_RS12350 PF04998 RNA polymerase Rpb1, domain 5 DM42_RS12350 PF05000 RNA polymerase Rpb1, domain 4 DM42_RS12350 PF00623 RNA polymerase Rpb1, domain 2 DM42_RS12350 PF04983 RNA polymerase Rpb1, domain 3 DM42_RS12375 PF04565 RNA polymerase Rpb2, domain 3 DM42_RS12375 PF04560 RNA polymerase Rpb2, domain 7 DM42_RS12375 PF00562 RNA polymerase Rpb2, domain 6 DM42_RS12375 PF10385 RNA polymerase beta subunit external 1 domain DM42_RS12375 PF04561 RNA polymerase Rpb2, domain 2 DM42_RS12375 PF04563 RNA polymerase beta subunit DM42_RS12385 PF04561 RNA polymerase Rpb2, domain 2 DM42_RS12385 PF04565 RNA polymerase Rpb2, domain 3 DM42_RS12385 PF10385 RNA polymerase beta subunit external 1 domain DM42_RS12385 PF00562 RNA polymerase Rpb2, domain 6 DM42_RS12385 PF04560 RNA polymerase Rpb2, domain 7 DM42_RS12385 PF04563 RNA polymerase beta subunit DM42_RS12420 PF03143 Elongation factor Tu C-terminal domain DM42_RS12420 PF00009 Elongation factor Tu GTP binding domain DM42_RS12420 PF03144 Elongation factor Tu domain 2 DM42_RS12800 PF03975 CheD chemotactic sensory transduction DM42_RS13055 PF00589 Phage integrase family DM42_RS13310 PF17764 3′ DNA-binding domain (3′BD) DM42_RS13310 PF00271 Helicase conserved C-terminal domain DM42_RS13310 PF00270 DEAD/DEAH box helicase DM42_RS13310 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DM42_RS13310 PF18074 Primosomal protein N C-terminal domain DM42_RS13315 PF00271 Helicase conserved C-terminal domain DM42_RS13315 PF17764 3′ DNA-binding domain (3′BD) DM42_RS13315 PF00270 DEAD/DEAH box helicase DM42_RS13315 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DM42_RS13315 PF18074 Primosomal protein N C-terminal domain DM42_RS13330 PF00501 AMP-binding enzyme DM42_RS13330 PF13193 AMP-binding enzyme C-terminal domain DM42_RS13505 PF04107 Glutamate-cysteine ligase family 2(GCS2) DM42_RS13525 PF01266 FAD dependent oxidoreductase DM42_RS13525 PF05430 S-adenosyl-L-methionine-dependent methyltransferase DM42_RS13550 PF00263 Bacterial type II and III secretion system protein DM42_RS13550 PF03958 Bacterial type II/III secretion system short domain DM42_RS13625 PF01047 MarR family DM42_RS13670 PF00813 FliP family DM42_RS13695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM42_RS13695 PF00512 His Kinase A (phospho-acceptor) domain DM42_RS13745 PF02627 Carboxymuconolactone decarboxylase family DM42_RS13940 PF02096 60Kd inner membrane protein DM42_RS13940 PF14849 YidC periplasmic domain DM42_RS14050 PF05506 Domain of unknown function (DUF756) DM42_RS14050 PF04185 Phosphoesterase family DM42_RS14375 PF01189 16S rRNA methyltransferase RsmB/F DM42_RS14375 PF01029 NusB family DM42_RS14415 PF03717 Penicillin-binding Protein dimerisation domain DM42_RS14415 PF00905 Penicillin binding protein transpeptidase domain DM42_RS14580 PF00171 Aldehyde dehydrogenase family DM42_RS14725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DM42_RS14725 PF00005 ABC transporter DM42_RS15240 PF06067 Domain of unknown function (DUF932) DM42_RS15325 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DM42_RS15325 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DM42_RS15405 PF00999 Sodium/hydrogen exchanger family DM42_RS15450 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DM42_RS15450 PF02785 Biotin carboxylase C-terminal domain DM42_RS15450 PF00289 Biotin carboxylase, N-terminal domain DM42_RS15530 PF00750 tRNA synthetases class I (R) DM42_RS15530 PF05746 DALR anticodon binding domain DM42_RS15530 PF03485 Arginyl tRNA synthetase N terminal domain DM42_RS15555 PF00809 Pterin binding enzyme DM42_RS15555 PF02574 Homocysteine S-methyltransferase DM42_RS15555 PF02607 B12 binding domain DM42_RS15555 PF02965 Vitamin B12 dependent methionine synthase, activation domain DM42_RS15555 PF02310 B12 binding domain DM42_RS15715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DM42_RS15715 PF02770 Acyl-CoA dehydrogenase, middle domain DM42_RS15715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DM42_RS15840 PF08241 Methyltransferase domain DM42_RS15950 PF14579 Helix-hairpin-helix motif DM42_RS15950 PF02811 PHP domain DM42_RS15950 PF07733 Bacterial DNA polymerase III alpha NTPase domain DM42_RS15950 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DM42_RS15995 PF02838 Glycosyl hydrolase family 20, domain 2 DM42_RS15995 PF00728 Glycosyl hydrolase family 20, catalytic domain DM42_RS15995 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain DM42_RS15995 PF03173 Putative carbohydrate binding domain DM42_RS16035 PF00682 HMGL-like DM42_RS16035 PF08502 LeuA allosteric (dimerisation) domain DM42_RS16120 PF00571 CBS domain DM42_RS16120 PF01380 SIS domain DM42_RS16495 PF00398 Ribosomal RNA adenine dimethylase DM42_RS16535 PF02562 PhoH-like protein DM42_RS16625 PF01266 FAD dependent oxidoreductase DM42_RS16625 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DM42_RS17010 PF07690 Major Facilitator Superfamily DM42_RS17015 PF07690 Major Facilitator Superfamily DM42_RS17255 PF02861 Clp amino terminal domain, pathogenicity island component DM42_RS17255 PF00004 ATPase family associated with various cellular activities (AAA) DM42_RS17255 PF10431 C-terminal, D2-small domain, of ClpB protein DM42_RS17255 PF07724 AAA domain (Cdc48 subfamily) DM42_RS17255 PF17871 AAA lid domain DM42_RS17365 PF11862 Domain of unknown function (DUF3382) DM42_RS17365 PF02653 Branched-chain amino acid transport system / permease component DM42_RS17645 PF10609 NUBPL iron-transfer P-loop NTPase DM42_RS17645 PF01883 Iron-sulfur cluster assembly protein DM42_RS17745 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DM42_RS17745 PF03900 Porphobilinogen deaminase, C-terminal domain DM42_RS18005 PF00521 DNA gyrase/topoisomerase IV, subunit A DM42_RS18055 PF00155 Aminotransferase class I and II DM42_RS18075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM42_RS18075 PF00183 Hsp90 protein DM42_RS18460 PF08502 LeuA allosteric (dimerisation) domain DM42_RS18460 PF00682 HMGL-like DM42_RS19100 PF02464 Competence-damaged protein DM42_RS19100 PF00994 Probable molybdopterin binding domain DM42_RS19100 PF18146 Damage-inducible protein CinA KH domain DM42_RS19135 PF00072 Response regulator receiver domain DM42_RS19135 PF02954 Bacterial regulatory protein, Fis family DM42_RS19135 PF00158 Sigma-54 interaction domain DM42_RS19225 PF00456 Transketolase, thiamine diphosphate binding domain DM42_RS19225 PF17831 Pyruvate dehydrogenase E1 component middle domain DM42_RS19310 PF00528 Binding-protein-dependent transport system inner membrane component DM42_RS19315 PF00528 Binding-protein-dependent transport system inner membrane component DM42_RS19320 PF08402 TOBE domain DM42_RS19320 PF00005 ABC transporter DM42_RS19335 PF07690 Major Facilitator Superfamily DM42_RS19340 PF05853 beta-keto acid cleavage enzyme DM42_RS19345 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DM42_RS19350 PF08240 Alcohol dehydrogenase GroES-like domain DM42_RS19350 PF00107 Zinc-binding dehydrogenase DM42_RS19360 PF17874 MalT-like TPR region DM42_RS19360 PF00196 Bacterial regulatory proteins, luxR family DM42_RS19365 PF13609 Gram-negative porin DM42_RS19370 PF02798 Glutathione S-transferase, N-terminal domain DM42_RS19375 PF01047 MarR family DM42_RS19380 PF07690 Major Facilitator Superfamily DM42_RS19385 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DM42_RS19390 PF02571 Precorrin-6x reductase CbiJ/CobK DM42_RS19395 PF01888 CbiD DM42_RS19400 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DM42_RS19410 PF02570 Precorrin-8X methylmutase DM42_RS19415 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DM42_RS19420 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DM42_RS19425 PF02839 Carbohydrate binding domain DM42_RS19435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DM42_RS19435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DM42_RS19435 PF02770 Acyl-CoA dehydrogenase, middle domain DM42_RS19440 PF03600 Citrate transporter DM42_RS19445 PF02515 CoA-transferase family III DM42_RS19455 PF00293 NUDIX domain DM42_RS19470 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DM42_RS19480 PF13519 von Willebrand factor type A domain DM42_RS19480 PF17863 AAA lid domain DM42_RS19480 PF07728 AAA domain (dynein-related subfamily) DM42_RS19485 PF02514 CobN/Magnesium Chelatase DM42_RS19490 PF02492 CobW/HypB/UreG, nucleotide-binding domain DM42_RS19490 PF07683 Cobalamin synthesis protein cobW C-terminal domain DM42_RS19495 PF00593 TonB dependent receptor DM42_RS19495 PF07715 TonB-dependent Receptor Plug Domain DM42_RS19500 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DM42_RS19510 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP DM42_RS19510 PF12557 Cob(I)alamin adenosyltransferase N terminal DM42_RS19515 PF07685 CobB/CobQ-like glutamine amidotransferase domain DM42_RS19515 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DM42_RS19520 PF05016 ParE toxin of type II toxin-antitoxin system, parDE DM42_RS19525 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH DM42_RS19530 PF07687 Peptidase dimerisation domain DM42_RS19530 PF01546 Peptidase family M20/M25/M40 DM42_RS19540 PF00551 Formyl transferase DM42_RS19545 PF07715 TonB-dependent Receptor Plug Domain DM42_RS19545 PF00593 TonB dependent receptor DM42_RS19550 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) DM42_RS19560 PF13193 AMP-binding enzyme C-terminal domain DM42_RS19560 PF00668 Condensation domain DM42_RS19560 PF00550 Phosphopantetheine attachment site DM42_RS19560 PF00501 AMP-binding enzyme DM42_RS19565 PF00550 Phosphopantetheine attachment site DM42_RS19565 PF00668 Condensation domain DM42_RS19565 PF13193 AMP-binding enzyme C-terminal domain DM42_RS19565 PF00501 AMP-binding enzyme DM42_RS19570 PF00664 ABC transporter transmembrane region DM42_RS19570 PF00005 ABC transporter DM42_RS19575 PF01497 Periplasmic binding protein DM42_RS19585 PF01032 FecCD transport family DM42_RS19590 PF00005 ABC transporter DM42_RS19595 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DM42_RS19600 PF03621 MbtH-like protein DM42_RS19615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM42_RS19615 PF00512 His Kinase A (phospho-acceptor) domain DM42_RS19620 PF00072 Response regulator receiver domain DM42_RS19620 PF00486 Transcriptional regulatory protein, C terminal DM42_RS19645 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DM42_RS19645 PF02753 Pili assembly chaperone PapD, C-terminal domain DM42_RS19650 PF13953 PapC C-terminal domain DM42_RS19650 PF13954 PapC N-terminal domain DM42_RS19650 PF00577 Outer membrane usher protein DM42_RS19655 PF00419 Fimbrial protein DM42_RS19660 PF02321 Outer membrane efflux protein DM42_RS19665 PF00873 AcrB/AcrD/AcrF family DM42_RS19670 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DM42_RS19670 PF00529 HlyD membrane-fusion protein of T1SS DM42_RS19675 PF08361 MAATS-type transcriptional repressor, C-terminal region DM42_RS19675 PF00440 Bacterial regulatory proteins, tetR family DM42_RS19680 PF08525 Opacity-associated protein A N-terminal motif DM42_RS19680 PF01476 LysM domain DM42_RS19680 PF01551 Peptidase family M23 DM42_RS19685 PF00528 Binding-protein-dependent transport system inner membrane component DM42_RS19690 PF00528 Binding-protein-dependent transport system inner membrane component DM42_RS19695 PF00497 Bacterial extracellular solute-binding proteins, family 3 DM42_RS19700 PF00083 Sugar (and other) transporter DM42_RS19705 PF04293 SpoVR like protein DM42_RS19710 PF04285 Protein of unknown function (DUF444) DM42_RS19715 PF06798 PrkA serine protein kinase C-terminal domain DM42_RS19715 PF08298 PrkA AAA domain DM42_RS19720 PF00672 HAMP domain DM42_RS19720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DM42_RS19720 PF02203 Tar ligand binding domain homologue DM42_RS19725 PF00294 pfkB family carbohydrate kinase DM42_RS19730 PF00356 Bacterial regulatory proteins, lacI family DM42_RS19735 PF02653 Branched-chain amino acid transport system / permease component DM42_RS19740 PF00005 ABC transporter DM42_RS19745 PF13407 Periplasmic binding protein domain DM42_RS19750 PF03466 LysR substrate binding domain DM42_RS19750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS19755 PF00005 ABC transporter DM42_RS19755 PF12857 TOBE-like domain DM42_RS19760 PF00528 Binding-protein-dependent transport system inner membrane component DM42_RS19765 PF00528 Binding-protein-dependent transport system inner membrane component DM42_RS19775 PF01726 LexA DNA binding domain DM42_RS19775 PF00717 Peptidase S24-like DM42_RS19795 PF00005 ABC transporter DM42_RS19800 PF01061 ABC-2 type transporter DM42_RS19810 PF03773 Predicted permease DM42_RS19815 PF00581 Rhodanese-like domain DM42_RS19820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS19820 PF03466 LysR substrate binding domain DM42_RS19825 PF01546 Peptidase family M20/M25/M40 DM42_RS19825 PF07687 Peptidase dimerisation domain DM42_RS19830 PF07690 Major Facilitator Superfamily DM42_RS19835 PF00248 Aldo/keto reductase family DM42_RS19845 PF01638 HxlR-like helix-turn-helix DM42_RS19860 PF00990 Diguanylate cyclase, GGDEF domain DM42_RS19860 PF03707 Bacterial signalling protein N terminal repeat DM42_RS19860 PF00563 EAL domain DM42_RS19905 PF00583 Acetyltransferase (GNAT) family DM42_RS19920 PF01207 Dihydrouridine synthase (Dus) DM42_RS19935 PF03459 TOBE domain DM42_RS19940 PF00005 ABC transporter DM42_RS19945 PF00528 Binding-protein-dependent transport system inner membrane component DM42_RS19950 PF00296 Luciferase-like monooxygenase DM42_RS19965 PF00893 Small Multidrug Resistance protein DM42_RS19970 PF03928 Haem-degrading DM42_RS19980 PF00293 NUDIX domain DM42_RS19980 PF09297 NADH pyrophosphatase zinc ribbon domain DM42_RS19985 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DM42_RS19990 PF04377 Arginine-tRNA-protein transferase, C terminus DM42_RS19990 PF04376 Arginine-tRNA-protein transferase, N terminus DM42_RS19995 PF01180 Dihydroorotate dehydrogenase DM42_RS20000 PF00497 Bacterial extracellular solute-binding proteins, family 3 DM42_RS20005 PF00528 Binding-protein-dependent transport system inner membrane component DM42_RS20010 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DM42_RS20010 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DM42_RS20015 PF00392 Bacterial regulatory proteins, gntR family DM42_RS20015 PF07729 FCD domain DM42_RS20020 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DM42_RS20025 PF01510 N-acetylmuramoyl-L-alanine amidase DM42_RS20030 PF00588 SpoU rRNA Methylase family DM42_RS20030 PF08032 RNA 2'-O ribose methyltransferase substrate binding DM42_RS20035 PF00773 RNB domain DM42_RS20035 PF08206 Ribonuclease B OB domain DM42_RS20035 PF08461 Ribonuclease R winged-helix domain DM42_RS20035 PF17876 Cold shock domain DM42_RS20035 PF00575 S1 RNA binding domain DM42_RS20045 PF09084 NMT1/THI5 like DM42_RS20055 PF01325 Iron dependent repressor, N-terminal DNA binding domain DM42_RS20055 PF00480 ROK family DM42_RS20060 PF00005 ABC transporter DM42_RS20065 PF02653 Branched-chain amino acid transport system / permease component DM42_RS20070 PF13407 Periplasmic binding protein domain DM42_RS20075 PF00294 pfkB family carbohydrate kinase DM42_RS20080 PF01740 STAS domain DM42_RS20080 PF00916 Sulfate permease family DM42_RS20095 PF07690 Major Facilitator Superfamily DM42_RS20100 PF00440 Bacterial regulatory proteins, tetR family DM42_RS20105 PF13193 AMP-binding enzyme C-terminal domain DM42_RS20105 PF00501 AMP-binding enzyme DM42_RS20120 PF17209 Hfq protein DM42_RS20130 PF02954 Bacterial regulatory protein, Fis family DM42_RS20130 PF00072 Response regulator receiver domain DM42_RS20130 PF00158 Sigma-54 interaction domain DM42_RS20160 PF00437 Type II/IV secretion system protein DM42_RS20170 PF13629 Pilus formation protein N terminal region DM42_RS20170 PF04972 BON domain DM42_RS20170 PF00263 Bacterial type II and III secretion system protein DM42_RS20185 PF01478 Type IV leader peptidase family DM42_RS20185 PF06750 Bacterial Peptidase A24 N-terminal domain DM42_RS20220 PF03969 AFG1-like ATPase DM42_RS20225 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DM42_RS20225 PF07992 Pyridine nucleotide-disulphide oxidoreductase DM42_RS20230 PF02817 e3 binding domain DM42_RS20230 PF00364 Biotin-requiring enzyme DM42_RS20230 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DM42_RS20235 PF16870 2-oxoglutarate dehydrogenase C-terminal DM42_RS20235 PF02779 Transketolase, pyrimidine binding domain DM42_RS20235 PF00676 Dehydrogenase E1 component DM42_RS20235 PF16078 2-oxoglutarate dehydrogenase N-terminus DM42_RS20240 PF00679 Elongation factor G C-terminus DM42_RS20240 PF00009 Elongation factor Tu GTP binding domain DM42_RS20240 PF03144 Elongation factor Tu domain 2 DM42_RS20245 PF01047 MarR family DM42_RS20250 PF02321 Outer membrane efflux protein DM42_RS20255 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DM42_RS20255 PF00529 HlyD membrane-fusion protein of T1SS DM42_RS20260 PF07690 Major Facilitator Superfamily DM42_RS20265 PF13276 HTH-like domain DM42_RS20265 PF00665 Integrase core domain DM42_RS20265 PF13333 Integrase core domain DM42_RS20275 PF16198 tRNA pseudouridylate synthase B C-terminal domain DM42_RS20275 PF01509 TruB family pseudouridylate synthase (N terminal domain) DM42_RS20275 PF09157 Pseudouridine synthase II TruB, C-terminal DM42_RS20280 PF02033 Ribosome-binding factor A DM42_RS20285 PF04760 Translation initiation factor IF-2, N-terminal region DM42_RS20285 PF00009 Elongation factor Tu GTP binding domain DM42_RS20285 PF11987 Translation-initiation factor 2 DM42_RS20285 PF08364 Bacterial translation initiation factor IF-2 associated region DM42_RS20290 PF08529 NusA N-terminal domain DM42_RS20290 PF13184 NusA-like KH domain DM42_RS20295 PF17384 RimP C-terminal SH3 domain DM42_RS20295 PF02576 RimP N-terminal domain DM42_RS20300 PF00849 RNA pseudouridylate synthase DM42_RS20300 PF01479 S4 domain DM42_RS20305 PF04079 Segregation and condensation complex subunit ScpB DM42_RS20310 PF00155 Aminotransferase class I and II DM42_RS20315 PF03466 LysR substrate binding domain DM42_RS20315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS20355 PF06804 NlpB/DapX lipoprotein DM42_RS20370 PF13350 Tyrosine phosphatase family DM42_RS20385 PF00216 Bacterial DNA-binding protein DM42_RS20390 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DM42_RS20390 PF01588 Putative tRNA binding domain DM42_RS20390 PF03147 Ferredoxin-fold anticodon binding domain DM42_RS20390 PF03484 tRNA synthetase B5 domain DM42_RS20390 PF03483 B3/4 domain DM42_RS20395 PF01409 tRNA synthetases class II core domain (F) DM42_RS20395 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DM42_RS20400 PF00453 Ribosomal protein L20 DM42_RS20405 PF01632 Ribosomal protein L35 DM42_RS20410 PF05198 Translation initiation factor IF-3, N-terminal domain DM42_RS20410 PF00707 Translation initiation factor IF-3, C-terminal domain DM42_RS20415 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DM42_RS20415 PF03129 Anticodon binding domain DM42_RS20415 PF02824 TGS domain DM42_RS20415 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DM42_RS20425 PF04607 Region found in RelA / SpoT proteins DM42_RS20425 PF13291 ACT domain DM42_RS20425 PF02824 TGS domain DM42_RS20430 PF01042 Endoribonuclease L-PSP DM42_RS20435 PF12697 Alpha/beta hydrolase family DM42_RS20440 PF03466 LysR substrate binding domain DM42_RS20440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS20460 PF01144 Coenzyme A transferase DM42_RS20465 PF01144 Coenzyme A transferase DM42_RS20490 PF01264 Chorismate synthase DM42_RS20495 PF07690 Major Facilitator Superfamily DM42_RS20510 PF03631 Virulence factor BrkB DM42_RS20515 PF03358 NADPH-dependent FMN reductase DM42_RS20525 PF01565 FAD binding domain DM42_RS20525 PF02913 FAD linked oxidases, C-terminal domain DM42_RS20535 PF03466 LysR substrate binding domain DM42_RS20535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS20540 PF02321 Outer membrane efflux protein DM42_RS20545 PF04632 Fusaric acid resistance protein family DM42_RS20555 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DM42_RS20560 PF00672 HAMP domain DM42_RS20560 PF02203 Tar ligand binding domain homologue DM42_RS20560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DM42_RS20565 PF07690 Major Facilitator Superfamily DM42_RS20570 PF01048 Phosphorylase superfamily DM42_RS20575 PF00580 UvrD/REP helicase N-terminal domain DM42_RS20575 PF13361 UvrD-like helicase C-terminal domain DM42_RS20580 PF08264 Anticodon-binding domain of tRNA DM42_RS20580 PF10458 Valyl tRNA synthetase tRNA binding arm DM42_RS20580 PF00133 tRNA synthetases class I (I, L, M and V) DM42_RS20585 PF00483 Nucleotidyl transferase DM42_RS20595 PF00512 His Kinase A (phospho-acceptor) domain DM42_RS20595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM42_RS20595 PF14827 Double sensory domain of two-component sensor kinase DM42_RS20595 PF00672 HAMP domain DM42_RS20595 PF13426 PAS domain DM42_RS20605 PF00072 Response regulator receiver domain DM42_RS20605 PF00486 Transcriptional regulatory protein, C terminal DM42_RS20615 PF01206 Sulfurtransferase TusA DM42_RS20620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS20620 PF03466 LysR substrate binding domain DM42_RS20625 PF00171 Aldehyde dehydrogenase family DM42_RS20630 PF01418 Helix-turn-helix domain, rpiR family DM42_RS20630 PF01380 SIS domain DM42_RS20635 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DM42_RS20635 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DM42_RS20645 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DM42_RS20645 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DM42_RS20650 PF01261 Xylose isomerase-like TIM barrel DM42_RS20655 PF02653 Branched-chain amino acid transport system / permease component DM42_RS20660 PF00005 ABC transporter DM42_RS20665 PF13407 Periplasmic binding protein domain DM42_RS20670 PF00294 pfkB family carbohydrate kinase DM42_RS20675 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DM42_RS20675 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DM42_RS20675 PF00205 Thiamine pyrophosphate enzyme, central domain DM42_RS20680 PF01261 Xylose isomerase-like TIM barrel DM42_RS20685 PF04962 KduI/IolB family DM42_RS20690 PF03928 Haem-degrading DM42_RS20700 PF00005 ABC transporter DM42_RS20705 PF00005 ABC transporter DM42_RS20720 PF03061 Thioesterase superfamily DM42_RS20725 PF00293 NUDIX domain DM42_RS20730 PF06779 Uncharacterised MFS-type transporter YbfB DM42_RS20735 PF03466 LysR substrate binding domain DM42_RS20735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS20740 PF02272 DHHA1 domain DM42_RS20740 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DM42_RS20740 PF01411 tRNA synthetases class II (A) DM42_RS20745 PF02515 CoA-transferase family III DM42_RS20760 PF00749 tRNA synthetases class I (E and Q), catalytic domain DM42_RS20760 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DM42_RS20765 PF00293 NUDIX domain DM42_RS20775 PF00034 Cytochrome c DM42_RS20775 PF03150 Di-haem cytochrome c peroxidase DM42_RS20780 PF04185 Phosphoesterase family DM42_RS20805 PF07969 Amidohydrolase family DM42_RS20815 PF03466 LysR substrate binding domain DM42_RS20815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS20830 PF00999 Sodium/hydrogen exchanger family DM42_RS20840 PF05726 Pirin C-terminal cupin domain DM42_RS20840 PF02678 Pirin DM42_RS20850 PF11658 Cellulose biosynthesis protein BcsG DM42_RS20855 PF00535 Glycosyl transferase family 2 DM42_RS20855 PF07238 PilZ domain DM42_RS20860 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DM42_RS20875 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) DM42_RS20880 PF01270 Glycosyl hydrolases family 8 DM42_RS20885 PF03170 Bacterial cellulose synthase subunit DM42_RS20900 PF00782 Dual specificity phosphatase, catalytic domain DM42_RS20905 PF12147 Putative methyltransferase DM42_RS20905 PF12146 Serine aminopeptidase, S33 DM42_RS20910 PF01066 CDP-alcohol phosphatidyltransferase DM42_RS20930 PF00072 Response regulator receiver domain DM42_RS20930 PF00196 Bacterial regulatory proteins, luxR family DM42_RS20935 PF00795 Carbon-nitrogen hydrolase DM42_RS20950 PF03600 Citrate transporter DM42_RS20955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS20955 PF03466 LysR substrate binding domain DM42_RS20960 PF01613 Flavin reductase like domain DM42_RS20970 PF03466 LysR substrate binding domain DM42_RS20970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS20980 PF07715 TonB-dependent Receptor Plug Domain DM42_RS20985 PF04773 FecR protein DM42_RS20985 PF16220 Domain of unknown function (DUF4880) DM42_RS20990 PF08281 Sigma-70, region 4 DM42_RS20990 PF04542 Sigma-70 region 2 DM42_RS20995 PF13609 Gram-negative porin DM42_RS21000 PF01464 Transglycosylase SLT domain DM42_RS21025 PF13296 Putative type VI secretion system Rhs element Vgr DM42_RS21025 PF04717 Type VI secretion system, phage-baseplate injector DM42_RS21025 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) DM42_RS21060 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) DM42_RS21060 PF04717 Type VI secretion system, phage-baseplate injector DM42_RS21060 PF13296 Putative type VI secretion system Rhs element Vgr DM42_RS21085 PF00486 Transcriptional regulatory protein, C terminal DM42_RS21085 PF00072 Response regulator receiver domain DM42_RS21090 PF00512 His Kinase A (phospho-acceptor) domain DM42_RS21090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM42_RS21090 PF00672 HAMP domain DM42_RS21095 PF01032 FecCD transport family DM42_RS21105 PF00005 ABC transporter DM42_RS21110 PF07715 TonB-dependent Receptor Plug Domain DM42_RS21110 PF00593 TonB dependent receptor DM42_RS21120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS21120 PF03466 LysR substrate binding domain DM42_RS21125 PF00775 Dioxygenase DM42_RS21125 PF04444 Catechol dioxygenase N terminus DM42_RS21135 PF00465 Iron-containing alcohol dehydrogenase DM42_RS21140 PF01494 FAD binding domain DM42_RS21155 PF07992 Pyridine nucleotide-disulphide oxidoreductase DM42_RS21155 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DM42_RS21160 PF03551 Transcriptional regulator PadR-like family DM42_RS21160 PF10400 Virulence activator alpha C-term DM42_RS21165 PF00109 Beta-ketoacyl synthase, N-terminal domain DM42_RS21165 PF02801 Beta-ketoacyl synthase, C-terminal domain DM42_RS21165 PF00107 Zinc-binding dehydrogenase DM42_RS21165 PF08659 KR domain DM42_RS21165 PF16197 Ketoacyl-synthetase C-terminal extension DM42_RS21165 PF00698 Acyl transferase domain DM42_RS21165 PF00550 Phosphopantetheine attachment site DM42_RS21165 PF14765 Polyketide synthase dehydratase DM42_RS21165 PF08240 Alcohol dehydrogenase GroES-like domain DM42_RS21170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DM42_RS21170 PF02770 Acyl-CoA dehydrogenase, middle domain DM42_RS21170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DM42_RS21170 PF12806 Acetyl-CoA dehydrogenase C-terminal like DM42_RS21175 PF00596 Class II Aldolase and Adducin N-terminal domain DM42_RS21180 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DM42_RS21185 PF01799 [2Fe-2S] binding domain DM42_RS21185 PF00111 2Fe-2S iron-sulfur cluster binding domain DM42_RS21190 PF00107 Zinc-binding dehydrogenase DM42_RS21190 PF08240 Alcohol dehydrogenase GroES-like domain DM42_RS21195 PF02350 UDP-N-acetylglucosamine 2-epimerase DM42_RS21230 PF01380 SIS domain DM42_RS21245 PF03861 ANTAR domain DM42_RS21245 PF08376 Nitrate and nitrite sensing DM42_RS21255 PF01527 Transposase DM42_RS21280 PF06715 Gp5 C-terminal repeat (3 copies) DM42_RS21280 PF04717 Type VI secretion system, phage-baseplate injector DM42_RS21285 PF05947 Type VI secretion system, TssF DM42_RS21295 PF12158 Protein of unknown function (DUF3592) DM42_RS21305 PF00589 Phage integrase family DM42_RS21315 PF02673 Bacitracin resistance protein BacA DM42_RS21325 PF01551 Peptidase family M23 DM42_RS21325 PF01476 LysM domain DM42_RS21330 PF13193 AMP-binding enzyme C-terminal domain DM42_RS21330 PF00501 AMP-binding enzyme DM42_RS21340 PF01554 MatE DM42_RS21370 PF02541 Ppx/GppA phosphatase family DM42_RS21375 PF13090 Polyphosphate kinase C-terminal domain 2 DM42_RS21375 PF13089 Polyphosphate kinase N-terminal domain DM42_RS21375 PF17941 Polyphosphate kinase C-terminal domain 1 DM42_RS21375 PF02503 Polyphosphate kinase middle domain DM42_RS21380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM42_RS21380 PF00989 PAS fold DM42_RS21380 PF11808 Phosphate regulon sensor protein PhoR DM42_RS21380 PF00512 His Kinase A (phospho-acceptor) domain DM42_RS21385 PF00072 Response regulator receiver domain DM42_RS21385 PF00486 Transcriptional regulatory protein, C terminal DM42_RS21390 PF01895 PhoU domain DM42_RS21395 PF00005 ABC transporter DM42_RS21400 PF00528 Binding-protein-dependent transport system inner membrane component DM42_RS21405 PF00528 Binding-protein-dependent transport system inner membrane component DM42_RS21410 PF12849 PBP superfamily domain DM42_RS21415 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DM42_RS21415 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DM42_RS21415 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DM42_RS21415 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DM42_RS21420 PF00809 Pterin binding enzyme DM42_RS21425 PF00004 ATPase family associated with various cellular activities (AAA) DM42_RS21425 PF17862 AAA+ lid domain DM42_RS21425 PF06480 FtsH Extracellular DM42_RS21425 PF01434 Peptidase family M41 DM42_RS21430 PF01728 FtsJ-like methyltransferase DM42_RS21435 PF01985 CRS1 / YhbY (CRM) domain DM42_RS21445 PF01272 Transcription elongation factor, GreA/GreB, C-term DM42_RS21445 PF03449 Transcription elongation factor, N-terminal DM42_RS21450 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DM42_RS21450 PF02142 MGS-like domain DM42_RS21450 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DM42_RS21455 PF01810 LysE type translocator DM42_RS21460 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DM42_RS21460 PF00117 Glutamine amidotransferase class-I DM42_RS21465 PF07690 Major Facilitator Superfamily DM42_RS21470 PF01476 LysM domain DM42_RS21470 PF01464 Transglycosylase SLT domain DM42_RS21475 PF00753 Metallo-beta-lactamase superfamily DM42_RS21475 PF16123 Hydroxyacylglutathione hydrolase C-terminus DM42_RS21480 PF08241 Methyltransferase domain DM42_RS21485 PF00075 RNase H DM42_RS21490 PF00929 Exonuclease DM42_RS21495 PF02694 Uncharacterised BCR, YnfA/UPF0060 family DM42_RS21500 PF08946 Osmosensory transporter coiled coil DM42_RS21500 PF00083 Sugar (and other) transporter DM42_RS21520 PF00156 Phosphoribosyl transferase domain DM42_RS21520 PF05139 Erythromycin esterase DM42_RS21535 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase DM42_RS21540 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG DM42_RS21550 PF01039 Carboxyl transferase domain DM42_RS21555 PF06857 Malonate decarboxylase delta subunit (MdcD) DM42_RS21560 PF16957 Malonate decarboxylase, alpha subunit, transporter DM42_RS21575 PF03466 LysR substrate binding domain DM42_RS21575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS21585 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DM42_RS21585 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DM42_RS21595 PF00011 Hsp20/alpha crystallin family DM42_RS21605 PF03741 Integral membrane protein TerC family DM42_RS21605 PF03471 Transporter associated domain DM42_RS21610 PF03466 LysR substrate binding domain DM42_RS21610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS21620 PF00291 Pyridoxal-phosphate dependent enzyme DM42_RS21625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS21625 PF03466 LysR substrate binding domain DM42_RS21630 PF07690 Major Facilitator Superfamily DM42_RS21635 PF00850 Histone deacetylase domain DM42_RS21640 PF01546 Peptidase family M20/M25/M40 DM42_RS21640 PF07687 Peptidase dimerisation domain DM42_RS21645 PF00083 Sugar (and other) transporter DM42_RS21645 PF07690 Major Facilitator Superfamily DM42_RS21650 PF03466 LysR substrate binding domain DM42_RS21650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS21655 PF13609 Gram-negative porin DM42_RS21660 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DM42_RS21665 PF00583 Acetyltransferase (GNAT) family DM42_RS21670 PF00491 Arginase family DM42_RS21680 PF13460 NAD(P)H-binding DM42_RS21685 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DM42_RS21685 PF07992 Pyridine nucleotide-disulphide oxidoreductase DM42_RS21690 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DM42_RS21690 PF00364 Biotin-requiring enzyme DM42_RS21690 PF02817 e3 binding domain DM42_RS21695 PF02780 Transketolase, C-terminal domain DM42_RS21695 PF02779 Transketolase, pyrimidine binding domain DM42_RS21700 PF00676 Dehydrogenase E1 component DM42_RS21700 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal DM42_RS21705 PF01613 Flavin reductase like domain DM42_RS21710 PF03466 LysR substrate binding domain DM42_RS21710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS21715 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DM42_RS21720 PF07681 DoxX DM42_RS21735 PF00356 Bacterial regulatory proteins, lacI family DM42_RS21750 PF00528 Binding-protein-dependent transport system inner membrane component DM42_RS21755 PF00005 ABC transporter DM42_RS21755 PF08402 TOBE domain DM42_RS21760 PF00149 Calcineurin-like phosphoesterase DM42_RS21765 PF07690 Major Facilitator Superfamily DM42_RS21770 PF00892 EamA-like transporter family DM42_RS21785 PF00174 Oxidoreductase molybdopterin binding domain DM42_RS21790 PF01292 Prokaryotic cytochrome b561 DM42_RS21800 PF01964 Radical SAM ThiC family DM42_RS21800 PF13667 ThiC-associated domain DM42_RS21805 PF05433 Glycine zipper 2TM domain DM42_RS21815 PF00892 EamA-like transporter family DM42_RS21825 PF00563 EAL domain DM42_RS21825 PF12792 CSS motif domain associated with EAL DM42_RS21830 PF00472 RF-1 domain DM42_RS21835 PF13538 UvrD-like helicase C-terminal domain DM42_RS21840 PF13361 UvrD-like helicase C-terminal domain DM42_RS21840 PF00580 UvrD/REP helicase N-terminal domain DM42_RS21840 PF12705 PD-(D/E)XK nuclease superfamily DM42_RS21845 PF17946 RecC C-terminal domain DM42_RS21850 PF12805 FUSC-like inner membrane protein yccS DM42_RS21855 PF00324 Amino acid permease DM42_RS21860 PF13416 Bacterial extracellular solute-binding protein DM42_RS21865 PF00528 Binding-protein-dependent transport system inner membrane component DM42_RS21870 PF00005 ABC transporter DM42_RS21870 PF08402 TOBE domain DM42_RS21875 PF13404 AsnC-type helix-turn-helix domain DM42_RS21875 PF01037 Lrp/AsnC ligand binding domain DM42_RS21885 PF02082 Transcriptional regulator DM42_RS21900 PF00909 Ammonium Transporter Family DM42_RS21915 PF13533 Biotin-lipoyl like DM42_RS21920 PF00873 AcrB/AcrD/AcrF family DM42_RS21925 PF00873 AcrB/AcrD/AcrF family DM42_RS21940 PF13609 Gram-negative porin DM42_RS21945 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DM42_RS21950 PF01799 [2Fe-2S] binding domain DM42_RS21950 PF00111 2Fe-2S iron-sulfur cluster binding domain DM42_RS21970 PF10417 C-terminal domain of 1-Cys peroxiredoxin DM42_RS21970 PF00578 AhpC/TSA family DM42_RS21975 PF03707 Bacterial signalling protein N terminal repeat DM42_RS21975 PF00990 Diguanylate cyclase, GGDEF domain DM42_RS21975 PF00563 EAL domain DM42_RS21985 PF00497 Bacterial extracellular solute-binding proteins, family 3 DM42_RS21990 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family DM42_RS21995 PF04996 Succinylarginine dihydrolase DM42_RS22000 PF00171 Aldehyde dehydrogenase family DM42_RS22005 PF04958 Arginine N-succinyltransferase beta subunit DM42_RS22010 PF04958 Arginine N-succinyltransferase beta subunit DM42_RS22015 PF00202 Aminotransferase class-III DM42_RS22020 PF00872 Transposase, Mutator family DM42_RS22025 PF12833 Helix-turn-helix domain DM42_RS22030 PF00005 ABC transporter DM42_RS22035 PF00528 Binding-protein-dependent transport system inner membrane component DM42_RS22040 PF00528 Binding-protein-dependent transport system inner membrane component DM42_RS22055 PF04794 YdjC-like protein DM42_RS22060 PF18693 TRAM domain DM42_RS22060 PF00919 Uncharacterized protein family UPF0004 DM42_RS22060 PF04055 Radical SAM superfamily DM42_RS22070 PF00296 Luciferase-like monooxygenase DM42_RS22075 PF00561 alpha/beta hydrolase fold DM42_RS22080 PF08543 Phosphomethylpyrimidine kinase DM42_RS22085 PF05506 Domain of unknown function (DUF756) DM42_RS22085 PF04185 Phosphoesterase family DM42_RS22090 PF13458 Periplasmic binding protein DM42_RS22100 PF13378 Enolase C-terminal domain-like DM42_RS22100 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DM42_RS22115 PF00534 Glycosyl transferases group 1 DM42_RS22115 PF13439 Glycosyltransferase Family 4 DM42_RS22120 PF00664 ABC transporter transmembrane region DM42_RS22120 PF00005 ABC transporter DM42_RS22125 PF00982 Glycosyltransferase family 20 DM42_RS22130 PF02358 Trehalose-phosphatase DM42_RS22135 PF02630 SCO1/SenC DM42_RS22150 PF13673 Acetyltransferase (GNAT) domain DM42_RS22155 PF02678 Pirin DM42_RS22155 PF05726 Pirin C-terminal cupin domain DM42_RS22160 PF03466 LysR substrate binding domain DM42_RS22160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS22165 PF13185 GAF domain DM42_RS22170 PF00557 Metallopeptidase family M24 DM42_RS22190 PF00561 alpha/beta hydrolase fold DM42_RS22195 PF00990 Diguanylate cyclase, GGDEF domain DM42_RS22195 PF00563 EAL domain DM42_RS22195 PF01590 GAF domain DM42_RS22195 PF00360 Phytochrome region DM42_RS22225 PF13614 AAA domain DM42_RS22260 PF00436 Single-strand binding protein family DM42_RS22265 PF01751 Toprim domain DM42_RS22265 PF01131 DNA topoisomerase DM42_RS22280 PF13411 MerR HTH family regulatory protein DM42_RS22285 PF00403 Heavy-metal-associated domain DM42_RS22290 PF01252 Signal peptidase (SPase) II DM42_RS22330 PF09278 MerR, DNA binding DM42_RS22330 PF00376 MerR family regulatory protein DM42_RS22335 PF02411 MerT mercuric transport protein DM42_RS22340 PF00403 Heavy-metal-associated domain DM42_RS22345 PF00403 Heavy-metal-associated domain DM42_RS22345 PF07992 Pyridine nucleotide-disulphide oxidoreductase DM42_RS22345 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DM42_RS22350 PF01526 Tn3 transposase DDE domain DM42_RS22350 PF13700 Domain of unknown function (DUF4158) DM42_RS22350 PF13700 Domain of unknown function (DUF4158) DM42_RS22350 PF01526 Tn3 transposase DDE domain DM42_RS22370 PF06067 Domain of unknown function (DUF932) DM42_RS22425 PF00580 UvrD/REP helicase N-terminal domain DM42_RS22425 PF13361 UvrD-like helicase C-terminal domain DM42_RS22545 PF04002 RadC-like JAB domain DM42_RS22580 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system DM42_RS22595 PF17755 UvrA DNA-binding domain DM42_RS22600 PF06965 Na+/H+ antiporter 1 DM42_RS22600 PF13462 Thioredoxin DM42_RS22605 PF00004 ATPase family associated with various cellular activities (AAA) DM42_RS22605 PF16193 AAA C-terminal domain DM42_RS22605 PF12002 MgsA AAA+ ATPase C terminal DM42_RS22610 PF07992 Pyridine nucleotide-disulphide oxidoreductase DM42_RS22615 PF00756 Putative esterase DM42_RS22630 PF00107 Zinc-binding dehydrogenase DM42_RS22630 PF08240 Alcohol dehydrogenase GroES-like domain DM42_RS22635 PF02583 Metal-sensitive transcriptional repressor DM42_RS22660 PF00271 Helicase conserved C-terminal domain DM42_RS22660 PF04851 Type III restriction enzyme, res subunit DM42_RS22660 PF02151 UvrB/uvrC motif DM42_RS22660 PF12344 Ultra-violet resistance protein B DM42_RS22660 PF17757 UvrB interaction domain DM42_RS22670 PF08240 Alcohol dehydrogenase GroES-like domain DM42_RS22680 PF03466 LysR substrate binding domain DM42_RS22680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS22690 PF04261 Dyp-type peroxidase family DM42_RS22695 PF00589 Phage integrase family DM42_RS22695 PF13356 Arm DNA-binding domain DM42_RS22710 PF01066 CDP-alcohol phosphatidyltransferase DM42_RS22715 PF01541 GIY-YIG catalytic domain DM42_RS22715 PF02151 UvrB/uvrC motif DM42_RS22715 PF08459 UvrC Helix-hairpin-helix N-terminal DM42_RS22725 PF09285 Elongation factor P, C-terminal DM42_RS22725 PF08207 Elongation factor P (EF-P) KOW-like domain DM42_RS22725 PF01132 Elongation factor P (EF-P) OB domain DM42_RS22730 PF00072 Response regulator receiver domain DM42_RS22730 PF02954 Bacterial regulatory protein, Fis family DM42_RS22730 PF00158 Sigma-54 interaction domain DM42_RS22735 PF00933 Glycosyl hydrolase family 3 N terminal domain DM42_RS22740 PF01648 4'-phosphopantetheinyl transferase superfamily DM42_RS22745 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DM42_RS22750 PF11967 Recombination protein O N terminal DM42_RS22750 PF02565 Recombination protein O C terminal DM42_RS22755 PF07650 KH domain DM42_RS22755 PF01926 50S ribosome-binding GTPase DM42_RS22760 PF14622 Ribonuclease-III-like DM42_RS22760 PF00035 Double-stranded RNA binding motif DM42_RS22765 PF10502 Signal peptidase, peptidase S26 DM42_RS22770 PF00679 Elongation factor G C-terminus DM42_RS22770 PF00009 Elongation factor Tu GTP binding domain DM42_RS22770 PF03144 Elongation factor Tu domain 2 DM42_RS22770 PF06421 GTP-binding protein LepA C-terminus DM42_RS22780 PF13180 PDZ domain DM42_RS22785 PF17188 MucB/RseB C-terminal domain DM42_RS22785 PF03888 MucB/RseB N-terminal domain DM42_RS22795 PF04542 Sigma-70 region 2 DM42_RS22795 PF08281 Sigma-70, region 4 DM42_RS22805 PF02801 Beta-ketoacyl synthase, C-terminal domain DM42_RS22805 PF00109 Beta-ketoacyl synthase, N-terminal domain DM42_RS22810 PF00550 Phosphopantetheine attachment site DM42_RS22820 PF00698 Acyl transferase domain DM42_RS22825 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DM42_RS22825 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DM42_RS22830 PF02504 Fatty acid synthesis protein DM42_RS22835 PF01783 Ribosomal L32p protein family DM42_RS22840 PF02620 Large ribosomal RNA subunit accumulation protein YceD DM42_RS22845 PF02545 Maf-like protein DM42_RS22850 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DM42_RS22855 PF01343 Peptidase family S49 DM42_RS22865 PF13419 Haloacid dehalogenase-like hydrolase DM42_RS22870 PF01479 S4 domain DM42_RS22870 PF00849 RNA pseudouridylate synthase DM42_RS22875 PF10150 Ribonuclease E/G family DM42_RS22875 PF12111 Polyribonucleotide phosphorylase C terminal DM42_RS22875 PF00575 S1 RNA binding domain DM42_RS22880 PF06463 Molybdenum Cofactor Synthesis C DM42_RS22880 PF04055 Radical SAM superfamily DM42_RS22885 PF12804 MobA-like NTP transferase domain DM42_RS22890 PF03454 MoeA C-terminal region (domain IV) DM42_RS22890 PF03453 MoeA N-terminal region (domain I and II) DM42_RS22890 PF00994 Probable molybdopterin binding domain DM42_RS22905 PF02646 RmuC family DM42_RS22910 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DM42_RS22910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DM42_RS22925 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DM42_RS22925 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DM42_RS22930 PF11953 Domain of unknown function (DUF3470) DM42_RS22930 PF00037 4Fe-4S binding domain DM42_RS22945 PF05981 CreA protein DM42_RS22980 PF01554 MatE DM42_RS22985 PF10415 Fumarase C C-terminus DM42_RS22985 PF00206 Lyase DM42_RS22990 PF03061 Thioesterase superfamily DM42_RS23005 PF00303 Thymidylate synthase DM42_RS23010 PF00158 Sigma-54 interaction domain DM42_RS23010 PF00072 Response regulator receiver domain DM42_RS23010 PF02954 Bacterial regulatory protein, Fis family DM42_RS23020 PF00186 Dihydrofolate reductase DM42_RS23025 PF01523 Putative modulator of DNA gyrase DM42_RS23030 PF04751 Protein of unknown function (DUF615) DM42_RS23035 PF00994 Probable molybdopterin binding domain DM42_RS23040 PF00929 Exonuclease DM42_RS23045 PF01435 Peptidase family M48 DM42_RS23050 PF03193 RsgA GTPase DM42_RS23060 PF03186 CobD/Cbib protein DM42_RS23060 PF17113 Regulatory signalling modulator protein AmpE DM42_RS23065 PF00293 NUDIX domain DM42_RS23070 PF01245 Ribosomal protein L19 DM42_RS23075 PF01746 tRNA (Guanine-1)-methyltransferase DM42_RS23080 PF05239 PRC-barrel domain DM42_RS23080 PF01782 RimM N-terminal domain DM42_RS23085 PF00886 Ribosomal protein S16 DM42_RS23090 PF07995 Glucose / Sorbosone dehydrogenase DM42_RS23105 PF01037 Lrp/AsnC ligand binding domain DM42_RS23110 PF01266 FAD dependent oxidoreductase DM42_RS23115 PF01012 Electron transfer flavoprotein domain DM42_RS23115 PF00766 Electron transfer flavoprotein FAD-binding domain DM42_RS23120 PF01012 Electron transfer flavoprotein domain DM42_RS23125 PF03180 NLPA lipoprotein DM42_RS23130 PF00528 Binding-protein-dependent transport system inner membrane component DM42_RS23135 PF00005 ABC transporter DM42_RS23135 PF09383 NIL domain DM42_RS23140 PF12146 Serine aminopeptidase, S33 DM42_RS23145 PF00850 Histone deacetylase domain DM42_RS23150 PF13406 Transglycosylase SLT domain DM42_RS23155 PF00291 Pyridoxal-phosphate dependent enzyme DM42_RS23165 PF01370 NAD dependent epimerase/dehydratase family DM42_RS23170 PF00294 pfkB family carbohydrate kinase DM42_RS23175 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DM42_RS23175 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DM42_RS23175 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DM42_RS23180 PF18073 Rubredoxin metal binding domain DM42_RS23190 PF00216 Bacterial DNA-binding protein DM42_RS23195 PF00575 S1 RNA binding domain DM42_RS23200 PF02224 Cytidylate kinase DM42_RS23205 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DM42_RS23210 PF01842 ACT domain DM42_RS23210 PF02153 Prephenate dehydrogenase DM42_RS23215 PF00800 Prephenate dehydratase DM42_RS23215 PF01817 Chorismate mutase type II DM42_RS23215 PF01842 ACT domain DM42_RS23220 PF00266 Aminotransferase class-V DM42_RS23230 PF03989 DNA gyrase C-terminal domain, beta-propeller DM42_RS23230 PF00521 DNA gyrase/topoisomerase IV, subunit A DM42_RS23235 PF00691 OmpA family DM42_RS23245 PF13419 Haloacid dehalogenase-like hydrolase DM42_RS23255 PF00665 Integrase core domain DM42_RS23260 PF01695 IstB-like ATP binding protein DM42_RS23270 PF12728 Helix-turn-helix domain DM42_RS23270 PF12727 PBP superfamily domain DM42_RS23280 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DM42_RS23280 PF00037 4Fe-4S binding domain DM42_RS23280 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DM42_RS23285 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DM42_RS23285 PF01568 Molydopterin dinucleotide binding domain DM42_RS23285 PF00384 Molybdopterin oxidoreductase DM42_RS23285 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DM42_RS23285 PF12838 4Fe-4S dicluster domain DM42_RS23295 PF01494 FAD binding domain DM42_RS23305 PF07690 Major Facilitator Superfamily DM42_RS23320 PF07722 Peptidase C26 DM42_RS23325 PF00392 Bacterial regulatory proteins, gntR family DM42_RS23325 PF07729 FCD domain DM42_RS23330 PF01425 Amidase DM42_RS23335 PF02600 Disulfide bond formation protein DsbB DM42_RS23345 PF00962 Adenosine/AMP deaminase DM42_RS23355 PF01979 Amidohydrolase family DM42_RS23360 PF01169 Uncharacterized protein family UPF0016 DM42_RS23370 PF01433 Peptidase family M1 domain DM42_RS23370 PF11940 Domain of unknown function (DUF3458) Ig-like fold DM42_RS23370 PF17432 Domain of unknown function (DUF3458_C) ARM repeats DM42_RS23375 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain DM42_RS23390 PF01494 FAD binding domain DM42_RS23415 PF00593 TonB dependent receptor DM42_RS23415 PF07715 TonB-dependent Receptor Plug Domain DM42_RS23435 PF01541 GIY-YIG catalytic domain DM42_RS23435 PF00929 Exonuclease DM42_RS23440 PF00313 'Cold-shock' DNA-binding domain DM42_RS23450 PF13609 Gram-negative porin DM42_RS23455 PF03449 Transcription elongation factor, N-terminal DM42_RS23455 PF01272 Transcription elongation factor, GreA/GreB, C-term DM42_RS23475 PF13291 ACT domain DM42_RS23475 PF04607 Region found in RelA / SpoT proteins DM42_RS23475 PF02824 TGS domain DM42_RS23480 PF01192 RNA polymerase Rpb6 DM42_RS23485 PF00625 Guanylate kinase DM42_RS23490 PF08340 Domain of unknown function (DUF1732) DM42_RS23490 PF03755 YicC-like family, N-terminal region DM42_RS23495 PF01138 3' exoribonuclease family, domain 1 DM42_RS23495 PF03725 3' exoribonuclease family, domain 2 DM42_RS23500 PF01725 Ham1 family DM42_RS23505 PF06969 HemN C-terminal domain DM42_RS23505 PF04055 Radical SAM superfamily DM42_RS23530 PF04717 Type VI secretion system, phage-baseplate injector DM42_RS23530 PF06715 Gp5 C-terminal repeat (3 copies) DM42_RS23550 PF00083 Sugar (and other) transporter DM42_RS23550 PF07690 Major Facilitator Superfamily DM42_RS23560 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DM42_RS23565 PF00654 Voltage gated chloride channel DM42_RS23580 PF03776 Septum formation topological specificity factor MinE DM42_RS23585 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DM42_RS23590 PF03775 Septum formation inhibitor MinC, C-terminal domain DM42_RS23590 PF05209 Septum formation inhibitor MinC, N-terminal domain DM42_RS23600 PF00487 Fatty acid desaturase DM42_RS23610 PF02403 Seryl-tRNA synthetase N-terminal domain DM42_RS23610 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DM42_RS23620 PF12002 MgsA AAA+ ATPase C terminal DM42_RS23620 PF00004 ATPase family associated with various cellular activities (AAA) DM42_RS23620 PF16193 AAA C-terminal domain DM42_RS23625 PF03548 Outer membrane lipoprotein carrier protein LolA DM42_RS23630 PF09397 Ftsk gamma domain DM42_RS23630 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DM42_RS23630 PF17854 FtsK alpha domain DM42_RS23630 PF01580 FtsK/SpoIIIE family DM42_RS23635 PF07992 Pyridine nucleotide-disulphide oxidoreductase DM42_RS23640 PF00488 MutS domain V DM42_RS23640 PF01713 Smr domain DM42_RS23645 PF03458 UPF0126 domain DM42_RS23650 PF00005 ABC transporter DM42_RS23650 PF08402 TOBE domain DM42_RS23655 PF00528 Binding-protein-dependent transport system inner membrane component DM42_RS23660 PF00528 Binding-protein-dependent transport system inner membrane component DM42_RS23665 PF01547 Bacterial extracellular solute-binding protein DM42_RS23670 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DM42_RS23670 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DM42_RS23675 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DM42_RS23680 PF02685 Glucokinase DM42_RS23680 PF01418 Helix-turn-helix domain, rpiR family DM42_RS23680 PF01380 SIS domain DM42_RS23685 PF07690 Major Facilitator Superfamily DM42_RS23695 PF00202 Aminotransferase class-III DM42_RS23700 PF01872 RibD C-terminal domain DM42_RS23700 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DM42_RS23705 PF00677 Lumazine binding domain DM42_RS23715 PF00925 GTP cyclohydrolase II DM42_RS23715 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DM42_RS23720 PF00885 6,7-dimethyl-8-ribityllumazine synthase DM42_RS23725 PF01029 NusB family DM42_RS23730 PF00155 Aminotransferase class I and II DM42_RS23740 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DM42_RS23760 PF02325 YGGT family DM42_RS23770 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DM42_RS23775 PF02146 Sir2 family DM42_RS23785 PF00293 NUDIX domain DM42_RS23790 PF08220 DeoR-like helix-turn-helix domain DM42_RS23790 PF00455 DeoR C terminal sensor domain DM42_RS23795 PF00378 Enoyl-CoA hydratase/isomerase DM42_RS23800 PF02515 CoA-transferase family III DM42_RS23805 PF07690 Major Facilitator Superfamily DM42_RS23810 PF03466 LysR substrate binding domain DM42_RS23810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS23820 PF13378 Enolase C-terminal domain-like DM42_RS23845 PF02390 Putative methyltransferase DM42_RS23850 PF02673 Bacitracin resistance protein BacA DM42_RS23860 PF03692 Putative zinc- or iron-chelating domain DM42_RS23865 PF04055 Radical SAM superfamily DM42_RS23865 PF06969 HemN C-terminal domain DM42_RS23880 PF00581 Rhodanese-like domain DM42_RS23895 PF02653 Branched-chain amino acid transport system / permease component DM42_RS23900 PF02653 Branched-chain amino acid transport system / permease component DM42_RS23905 PF00005 ABC transporter DM42_RS23910 PF00005 ABC transporter DM42_RS23915 PF01774 UreD urease accessory protein DM42_RS23920 PF00547 Urease, gamma subunit DM42_RS23925 PF00699 Urease beta subunit DM42_RS23930 PF01979 Amidohydrolase family DM42_RS23930 PF00449 Urease alpha-subunit, N-terminal domain DM42_RS23935 PF05194 UreE urease accessory protein, C-terminal domain DM42_RS23935 PF02814 UreE urease accessory protein, N-terminal domain DM42_RS23940 PF01730 UreF DM42_RS23945 PF02492 CobW/HypB/UreG, nucleotide-binding domain DM42_RS23950 PF00534 Glycosyl transferases group 1 DM42_RS23950 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DM42_RS23960 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DM42_RS23965 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DM42_RS23965 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DM42_RS23965 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DM42_RS23965 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DM42_RS23980 PF13439 Glycosyltransferase Family 4 DM42_RS23980 PF00534 Glycosyl transferases group 1 DM42_RS23985 PF16363 GDP-mannose 4,6 dehydratase DM42_RS23995 PF02719 Polysaccharide biosynthesis protein DM42_RS24000 PF00953 Glycosyl transferase family 4 DM42_RS24005 PF01370 NAD dependent epimerase/dehydratase family DM42_RS24010 PF13439 Glycosyltransferase Family 4 DM42_RS24010 PF00534 Glycosyl transferases group 1 DM42_RS24015 PF01050 Mannose-6-phosphate isomerase DM42_RS24015 PF00483 Nucleotidyl transferase DM42_RS24020 PF00534 Glycosyl transferases group 1 DM42_RS24020 PF13439 Glycosyltransferase Family 4 DM42_RS24030 PF13439 Glycosyltransferase Family 4 DM42_RS24040 PF13439 Glycosyltransferase Family 4 DM42_RS24040 PF00534 Glycosyl transferases group 1 DM42_RS24060 PF13439 Glycosyltransferase Family 4 DM42_RS24060 PF00534 Glycosyl transferases group 1 DM42_RS24070 PF04321 RmlD substrate binding domain DM42_RS24075 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DM42_RS24080 PF00483 Nucleotidyl transferase DM42_RS24085 PF16363 GDP-mannose 4,6 dehydratase DM42_RS24090 PF00149 Calcineurin-like phosphoesterase DM42_RS24100 PF01979 Amidohydrolase family DM42_RS24105 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DM42_RS24105 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DM42_RS24110 PF00156 Phosphoribosyl transferase domain DM42_RS24115 PF03652 Holliday junction resolvase DM42_RS24120 PF02622 Uncharacterized ACR, COG1678 DM42_RS24130 PF00301 Rubredoxin DM42_RS24140 PF00118 TCP-1/cpn60 chaperonin family DM42_RS24145 PF00166 Chaperonin 10 Kd subunit DM42_RS24170 PF08281 Sigma-70, region 4 DM42_RS24170 PF04542 Sigma-70 region 2 DM42_RS24190 PF01266 FAD dependent oxidoreductase DM42_RS24195 PF00497 Bacterial extracellular solute-binding proteins, family 3 DM42_RS24200 PF02423 Ornithine cyclodeaminase/mu-crystallin family DM42_RS24205 PF08348 YheO-like PAS domain DM42_RS24205 PF13309 HTH domain DM42_RS24210 PF01323 DSBA-like thioredoxin domain DM42_RS24215 PF07690 Major Facilitator Superfamily DM42_RS24220 PF01925 Sulfite exporter TauE/SafE DM42_RS24240 PF10605 3HB-oligomer hydrolase (3HBOH) DM42_RS24255 PF01323 DSBA-like thioredoxin domain DM42_RS24260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS24275 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DM42_RS24275 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DM42_RS24280 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DM42_RS24280 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DM42_RS24280 PF00111 2Fe-2S iron-sulfur cluster binding domain DM42_RS24280 PF01799 [2Fe-2S] binding domain DM42_RS24285 PF07690 Major Facilitator Superfamily DM42_RS24290 PF00892 EamA-like transporter family DM42_RS24295 PF12833 Helix-turn-helix domain DM42_RS24295 PF01965 DJ-1/PfpI family DM42_RS24300 PF00266 Aminotransferase class-V DM42_RS24305 PF03466 LysR substrate binding domain DM42_RS24305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS24310 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DM42_RS24310 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DM42_RS24315 PF00881 Nitroreductase family DM42_RS24320 PF07690 Major Facilitator Superfamily DM42_RS24335 PF04209 homogentisate 1,2-dioxygenase DM42_RS24340 PF07690 Major Facilitator Superfamily DM42_RS24350 PF01494 FAD binding domain DM42_RS24370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DM42_RS24370 PF02770 Acyl-CoA dehydrogenase, middle domain DM42_RS24370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DM42_RS24375 PF00578 AhpC/TSA family DM42_RS24375 PF10417 C-terminal domain of 1-Cys peroxiredoxin DM42_RS24400 PF03477 ATP cone domain DM42_RS24405 PF00464 Serine hydroxymethyltransferase DM42_RS24410 PF00106 short chain dehydrogenase DM42_RS24415 PF03061 Thioesterase superfamily DM42_RS24420 PF01618 MotA/TolQ/ExbB proton channel family DM42_RS24425 PF02472 Biopolymer transport protein ExbD/TolR DM42_RS24435 PF07676 WD40-like Beta Propeller Repeat DM42_RS24435 PF04052 TolB amino-terminal domain DM42_RS24440 PF00691 OmpA family DM42_RS24470 PF11455 Protein of unknown function (DUF3018) DM42_RS24485 PF05360 yiaA/B two helix domain DM42_RS24495 PF02627 Carboxymuconolactone decarboxylase family DM42_RS24520 PF00155 Aminotransferase class I and II DM42_RS24525 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DM42_RS24530 PF00698 Acyl transferase domain DM42_RS24530 PF14765 Polyketide synthase dehydratase DM42_RS24530 PF16197 Ketoacyl-synthetase C-terminal extension DM42_RS24530 PF00109 Beta-ketoacyl synthase, N-terminal domain DM42_RS24530 PF02801 Beta-ketoacyl synthase, C-terminal domain DM42_RS24530 PF00550 Phosphopantetheine attachment site DM42_RS24530 PF08240 Alcohol dehydrogenase GroES-like domain DM42_RS24530 PF08659 KR domain DM42_RS24540 PF00665 Integrase core domain DM42_RS24545 PF01695 IstB-like ATP binding protein DM42_RS24555 PF00106 short chain dehydrogenase DM42_RS24560 PF05159 Capsule polysaccharide biosynthesis protein DM42_RS24580 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DM42_RS24585 PF00483 Nucleotidyl transferase DM42_RS24590 PF16363 GDP-mannose 4,6 dehydratase DM42_RS24615 PF00005 ABC transporter DM42_RS24620 PF01061 ABC-2 type transporter DM42_RS24630 PF02563 Polysaccharide biosynthesis/export protein DM42_RS24640 PF05159 Capsule polysaccharide biosynthesis protein DM42_RS24645 PF05552 Conserved TM helix DM42_RS24645 PF00924 Mechanosensitive ion channel DM42_RS24655 PF01050 Mannose-6-phosphate isomerase DM42_RS24655 PF00483 Nucleotidyl transferase DM42_RS24660 PF09335 SNARE associated Golgi protein DM42_RS24665 PF01119 DNA mismatch repair protein, C-terminal domain DM42_RS24665 PF08676 MutL C terminal dimerisation domain DM42_RS24675 PF02909 Tetracyclin repressor-like, C-terminal domain DM42_RS24675 PF00440 Bacterial regulatory proteins, tetR family DM42_RS24680 PF07690 Major Facilitator Superfamily DM42_RS24690 PF00586 AIR synthase related protein, N-terminal domain DM42_RS24690 PF02769 AIR synthase related protein, C-terminal domain DM42_RS24695 PF00308 Bacterial dnaA protein DM42_RS24705 PF12627 Probable RNA and SrmB- binding site of polymerase A DM42_RS24705 PF01743 Poly A polymerase head domain DM42_RS24705 PF12626 Polymerase A arginine-rich C-terminus DM42_RS24710 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DM42_RS24720 PF02548 Ketopantoate hydroxymethyltransferase DM42_RS24725 PF00425 chorismate binding enzyme DM42_RS24725 PF04715 Anthranilate synthase component I, N terminal region DM42_RS24725 PF00117 Glutamine amidotransferase class-I DM42_RS24730 PF00684 DnaJ central domain DM42_RS24730 PF01556 DnaJ C terminal domain DM42_RS24730 PF00226 DnaJ domain DM42_RS24735 PF00012 Hsp70 protein DM42_RS24745 PF01025 GrpE DM42_RS24750 PF01479 S4 domain DM42_RS24755 PF00762 Ferrochelatase DM42_RS24760 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding DM42_RS24760 PF01628 HrcA protein C terminal domain DM42_RS24765 PF01513 ATP-NAD kinase DM42_RS24770 PF02463 RecF/RecN/SMC N terminal domain DM42_RS24775 PF08335 GlnD PII-uridylyltransferase DM42_RS24775 PF03710 Glutamate-ammonia ligase adenylyltransferase DM42_RS24785 PF00795 Carbon-nitrogen hydrolase DM42_RS24790 PF01523 Putative modulator of DNA gyrase DM42_RS24795 PF00793 DAHP synthetase I family DM42_RS24810 PF00970 Oxidoreductase FAD-binding domain DM42_RS24810 PF00175 Oxidoreductase NAD-binding domain DM42_RS24810 PF00042 Globin DM42_RS24815 PF01923 Cobalamin adenosyltransferase DM42_RS24820 PF01565 FAD binding domain DM42_RS24820 PF02913 FAD linked oxidases, C-terminal domain DM42_RS24825 PF02913 FAD linked oxidases, C-terminal domain DM42_RS24825 PF01565 FAD binding domain DM42_RS24830 PF01565 FAD binding domain DM42_RS24835 PF02754 Cysteine-rich domain DM42_RS24835 PF13183 4Fe-4S dicluster domain DM42_RS24840 PF01168 Alanine racemase, N-terminal domain DM42_RS24845 PF14748 Pyrroline-5-carboxylate reductase dimerisation DM42_RS24845 PF03807 NADP oxidoreductase coenzyme F420-dependent DM42_RS24850 PF01040 UbiA prenyltransferase family DM42_RS24855 PF00210 Ferritin-like domain DM42_RS24860 PF00141 Peroxidase DM42_RS24865 PF03466 LysR substrate binding domain DM42_RS24865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS24870 PF00270 DEAD/DEAH box helicase DM42_RS24870 PF00271 Helicase conserved C-terminal domain DM42_RS24870 PF17191 RecG wedge domain DM42_RS24875 PF02547 Queuosine biosynthesis protein DM42_RS24880 PF01702 Queuine tRNA-ribosyltransferase DM42_RS24885 PF02699 Preprotein translocase subunit DM42_RS24890 PF07549 SecD/SecF GG Motif DM42_RS24890 PF13721 SecD export protein N-terminal TM region DM42_RS24890 PF02355 Protein export membrane protein DM42_RS24895 PF02355 Protein export membrane protein DM42_RS24895 PF07549 SecD/SecF GG Motif DM42_RS24900 PF13180 PDZ domain DM42_RS24900 PF03572 Peptidase family S41 DM42_RS24905 PF07690 Major Facilitator Superfamily DM42_RS24910 PF04264 YceI-like domain DM42_RS24915 PF04264 YceI-like domain DM42_RS24930 PF04403 Paraquat-inducible protein A DM42_RS24935 PF02470 MlaD protein DM42_RS24950 PF02926 THUMP domain DM42_RS24950 PF01170 Putative RNA methylase family UPF0020 DM42_RS24975 PF00795 Carbon-nitrogen hydrolase DM42_RS24980 PF03466 LysR substrate binding domain DM42_RS24980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS24985 PF02233 NAD(P) transhydrogenase beta subunit DM42_RS24990 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DM42_RS24995 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DM42_RS24995 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DM42_RS25000 PF00293 NUDIX domain DM42_RS25010 PF01645 Conserved region in glutamate synthase DM42_RS25015 PF13417 Glutathione S-transferase, N-terminal domain DM42_RS25015 PF00043 Glutathione S-transferase, C-terminal domain DM42_RS25020 PF00557 Metallopeptidase family M24 DM42_RS25020 PF05195 Aminopeptidase P, N-terminal domain DM42_RS25025 PF01494 FAD binding domain DM42_RS25030 PF01207 Dihydrouridine synthase (Dus) DM42_RS25035 PF02954 Bacterial regulatory protein, Fis family DM42_RS25040 PF01808 AICARFT/IMPCHase bienzyme DM42_RS25040 PF02142 MGS-like domain DM42_RS25045 PF02075 Crossover junction endodeoxyribonuclease RuvC DM42_RS25050 PF07499 RuvA, C-terminal domain DM42_RS25050 PF01330 RuvA N terminal domain DM42_RS25055 PF05491 RuvB C-terminal winged helix domain DM42_RS25055 PF17864 RuvB AAA lid domain DM42_RS25055 PF05496 Holliday junction DNA helicase RuvB P-loop domain DM42_RS25070 PF00300 Histidine phosphatase superfamily (branch 1) DM42_RS25075 PF02580 D-Tyr-tRNA(Tyr) deacylase DM42_RS25080 PF00579 tRNA synthetases class I (W and Y) DM42_RS25080 PF01479 S4 domain DM42_RS25085 PF03702 Anhydro-N-acetylmuramic acid kinase DM42_RS25090 PF01521 Iron-sulphur cluster biosynthesis DM42_RS25095 PF00380 Ribosomal protein S9/S16 DM42_RS25100 PF00572 Ribosomal protein L13 DM42_RS25120 PF01979 Amidohydrolase family DM42_RS25125 PF13230 Glutamine amidotransferases class-II DM42_RS25130 PF12951 Passenger-associated-transport-repeat DM42_RS25135 PF00005 ABC transporter DM42_RS25140 PF00528 Binding-protein-dependent transport system inner membrane component DM42_RS25145 PF00528 Binding-protein-dependent transport system inner membrane component DM42_RS25150 PF00497 Bacterial extracellular solute-binding proteins, family 3 DM42_RS25155 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DM42_RS25155 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DM42_RS25160 PF03466 LysR substrate binding domain DM42_RS25160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS25165 PF00206 Lyase DM42_RS25165 PF08328 Adenylosuccinate lyase C-terminal DM42_RS25170 PF00890 FAD binding domain DM42_RS25170 PF02910 Fumarate reductase flavoprotein C-term DM42_RS25185 PF02447 GntP family permease DM42_RS25190 PF01081 KDPG and KHG aldolase DM42_RS25195 PF00920 Dehydratase family DM42_RS25200 PF02685 Glucokinase DM42_RS25200 PF01380 SIS domain DM42_RS25200 PF01418 Helix-turn-helix domain, rpiR family DM42_RS25205 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DM42_RS25210 PF03653 Uncharacterised protein family (UPF0093) DM42_RS25215 PF00171 Aldehyde dehydrogenase family DM42_RS25220 PF06144 DNA polymerase III, delta subunit DM42_RS25220 PF14840 Processivity clamp loader gamma complex DNA pol III C-term DM42_RS25225 PF04390 Lipopolysaccharide-assembly DM42_RS25230 PF13603 Leucyl-tRNA synthetase, Domain 2 DM42_RS25230 PF00133 tRNA synthetases class I (I, L, M and V) DM42_RS25230 PF08264 Anticodon-binding domain of tRNA DM42_RS25230 PF09334 tRNA synthetases class I (M) DM42_RS25235 PF02472 Biopolymer transport protein ExbD/TolR DM42_RS25240 PF01618 MotA/TolQ/ExbB proton channel family DM42_RS25245 PF05173 Dihydrodipicolinate reductase, C-terminus DM42_RS25245 PF01113 Dihydrodipicolinate reductase, N-terminus DM42_RS25250 PF04355 SmpA / OmlA family DM42_RS25255 PF01475 Ferric uptake regulator family DM42_RS25260 PF04115 Ureidoglycolate lyase DM42_RS25265 PF03561 Allantoicase repeat DM42_RS25270 PF00375 Sodium:dicarboxylate symporter family DM42_RS25275 PF07729 FCD domain DM42_RS25275 PF00392 Bacterial regulatory proteins, gntR family DM42_RS25280 PF03466 LysR substrate binding domain DM42_RS25280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS25285 PF07690 Major Facilitator Superfamily DM42_RS25290 PF08240 Alcohol dehydrogenase GroES-like domain DM42_RS25290 PF00107 Zinc-binding dehydrogenase DM42_RS25300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS25300 PF03466 LysR substrate binding domain DM42_RS25305 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DM42_RS25305 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DM42_RS25310 PF02780 Transketolase, C-terminal domain DM42_RS25310 PF00456 Transketolase, thiamine diphosphate binding domain DM42_RS25310 PF02779 Transketolase, pyrimidine binding domain DM42_RS25315 PF17284 Spermidine synthase tetramerisation domain DM42_RS25320 PF18029 Glyoxalase-like domain DM42_RS25325 PF04452 RNA methyltransferase DM42_RS25335 PF00545 ribonuclease DM42_RS25340 PF01515 Phosphate acetyl/butaryl transferase DM42_RS25340 PF03949 Malic enzyme, NAD binding domain DM42_RS25340 PF00390 Malic enzyme, N-terminal domain DM42_RS25345 PF02769 AIR synthase related protein, C-terminal domain DM42_RS25345 PF00586 AIR synthase related protein, N-terminal domain DM42_RS25350 PF04608 Phosphatidylglycerophosphatase A DM42_RS25355 PF02464 Competence-damaged protein DM42_RS25365 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DM42_RS25380 PF02653 Branched-chain amino acid transport system / permease component DM42_RS25385 PF00005 ABC transporter DM42_RS25390 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DM42_RS25400 PF01081 KDPG and KHG aldolase DM42_RS25405 PF05035 2-keto-3-deoxy-galactonokinase DM42_RS25410 PF01614 Bacterial transcriptional regulator DM42_RS25410 PF09339 IclR helix-turn-helix domain DM42_RS25425 PF00912 Transglycosylase DM42_RS25430 PF08501 Shikimate dehydrogenase substrate binding domain DM42_RS25430 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DM42_RS25430 PF01488 Shikimate / quinate 5-dehydrogenase DM42_RS25435 PF00773 RNB domain DM42_RS25440 PF05728 Uncharacterised protein family (UPF0227) DM42_RS25445 PF01225 Mur ligase family, catalytic domain DM42_RS25445 PF02875 Mur ligase family, glutamate ligase domain DM42_RS25445 PF08245 Mur ligase middle domain DM42_RS25455 PF00578 AhpC/TSA family DM42_RS25460 PF01220 Dehydroquinase class II DM42_RS25465 PF00364 Biotin-requiring enzyme DM42_RS25470 PF02785 Biotin carboxylase C-terminal domain DM42_RS25470 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DM42_RS25470 PF00289 Biotin carboxylase, N-terminal domain DM42_RS25485 PF08534 Redoxin DM42_RS25490 PF00294 pfkB family carbohydrate kinase DM42_RS25505 PF00268 Ribonucleotide reductase, small chain DM42_RS25510 PF02867 Ribonucleotide reductase, barrel domain DM42_RS25510 PF00317 Ribonucleotide reductase, all-alpha domain DM42_RS25510 PF03477 ATP cone domain DM42_RS25515 PF01510 N-acetylmuramoyl-L-alanine amidase DM42_RS25530 PF00448 SRP54-type protein, GTPase domain DM42_RS25530 PF02881 SRP54-type protein, helical bundle domain DM42_RS25530 PF02978 Signal peptide binding domain DM42_RS25535 PF00156 Phosphoribosyl transferase domain DM42_RS25540 PF01914 MarC family integral membrane protein DM42_RS25545 PF03129 Anticodon binding domain DM42_RS25545 PF04073 Aminoacyl-tRNA editing domain DM42_RS25545 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DM42_RS25550 PF00293 NUDIX domain DM42_RS25560 PF00696 Amino acid kinase family DM42_RS25560 PF01472 PUA domain DM42_RS25565 PF01018 GTP1/OBG DM42_RS25565 PF01926 50S ribosome-binding GTPase DM42_RS25570 PF01016 Ribosomal L27 protein DM42_RS25575 PF00829 Ribosomal prokaryotic L21 protein DM42_RS25580 PF00348 Polyprenyl synthetase DM42_RS25590 PF01595 Cyclin M transmembrane N-terminal domain DM42_RS25590 PF03471 Transporter associated domain DM42_RS25590 PF00571 CBS domain DM42_RS25595 PF00437 Type II/IV secretion system protein DM42_RS25595 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DM42_RS25600 PF00482 Type II secretion system (T2SS), protein F DM42_RS25605 PF01478 Type IV leader peptidase family DM42_RS25605 PF06750 Bacterial Peptidase A24 N-terminal domain DM42_RS25610 PF01121 Dephospho-CoA kinase DM42_RS25615 PF07072 Cell division protein DM42_RS25620 PF03884 DNA gyrase inhibitor YacG DM42_RS25625 PF00293 NUDIX domain DM42_RS25635 PF01960 ArgJ family DM42_RS25640 PF07516 SecA Wing and Scaffold domain DM42_RS25640 PF01043 SecA preprotein cross-linking domain DM42_RS25640 PF02810 SEC-C motif DM42_RS25640 PF07517 SecA DEAD-like domain DM42_RS25650 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DM42_RS25660 PF08534 Redoxin DM42_RS25665 PF00091 Tubulin/FtsZ family, GTPase domain DM42_RS25665 PF12327 FtsZ family, C-terminal domain DM42_RS25670 PF02491 SHS2 domain inserted in FTSA DM42_RS25675 PF08478 POTRA domain, FtsQ-type DM42_RS25675 PF03799 Cell division protein FtsQ DM42_RS25680 PF07478 D-ala D-ala ligase C-terminus DM42_RS25680 PF01820 D-ala D-ala ligase N-terminus DM42_RS25685 PF02875 Mur ligase family, glutamate ligase domain DM42_RS25685 PF01225 Mur ligase family, catalytic domain DM42_RS25685 PF08245 Mur ligase middle domain DM42_RS25690 PF03033 Glycosyltransferase family 28 N-terminal domain DM42_RS25690 PF04101 Glycosyltransferase family 28 C-terminal domain DM42_RS25695 PF01098 Cell cycle protein DM42_RS25700 PF02875 Mur ligase family, glutamate ligase domain DM42_RS25700 PF08245 Mur ligase middle domain DM42_RS25705 PF00953 Glycosyl transferase family 4 DM42_RS25705 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DM42_RS25710 PF08245 Mur ligase middle domain DM42_RS25710 PF02875 Mur ligase family, glutamate ligase domain DM42_RS25710 PF01225 Mur ligase family, catalytic domain DM42_RS25715 PF02875 Mur ligase family, glutamate ligase domain DM42_RS25715 PF08245 Mur ligase middle domain DM42_RS25720 PF03717 Penicillin-binding Protein dimerisation domain DM42_RS25720 PF00905 Penicillin binding protein transpeptidase domain DM42_RS25725 PF04999 Cell division protein FtsL DM42_RS25730 PF01795 MraW methylase family DM42_RS25735 PF02381 MraZ protein, putative antitoxin-like DM42_RS25740 PF03232 Ubiquinone biosynthesis protein COQ7 DM42_RS25745 PF13609 Gram-negative porin DM42_RS25750 PF13193 AMP-binding enzyme C-terminal domain DM42_RS25750 PF00501 AMP-binding enzyme DM42_RS25755 PF01568 Molydopterin dinucleotide binding domain DM42_RS25755 PF00384 Molybdopterin oxidoreductase DM42_RS25755 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DM42_RS25785 PF00378 Enoyl-CoA hydratase/isomerase DM42_RS25795 PF02803 Thiolase, C-terminal domain DM42_RS25795 PF00108 Thiolase, N-terminal domain DM42_RS25800 PF00378 Enoyl-CoA hydratase/isomerase DM42_RS25805 PF03061 Thioesterase superfamily DM42_RS25810 PF00501 AMP-binding enzyme DM42_RS25810 PF14535 AMP-binding enzyme C-terminal domain DM42_RS25815 PF06725 3D domain DM42_RS25815 PF03562 MltA specific insert domain DM42_RS25820 PF04379 ApaG domain DM42_RS25825 PF00834 Ribulose-phosphate 3 epimerase family DM42_RS25830 PF13419 Haloacid dehalogenase-like hydrolase DM42_RS25835 PF04715 Anthranilate synthase component I, N terminal region DM42_RS25835 PF00425 chorismate binding enzyme DM42_RS25840 PF00117 Glutamine amidotransferase class-I DM42_RS25845 PF02885 Glycosyl transferase family, helical bundle domain DM42_RS25845 PF00591 Glycosyl transferase family, a/b domain DM42_RS25850 PF00218 Indole-3-glycerol phosphate synthase DM42_RS25860 PF03167 Uracil DNA glycosylase superfamily DM42_RS25865 PF02525 Flavodoxin-like fold DM42_RS25875 PF13098 Thioredoxin-like domain DM42_RS25875 PF10411 Disulfide bond isomerase protein N-terminus DM42_RS25880 PF01494 FAD binding domain DM42_RS25885 PF01926 50S ribosome-binding GTPase DM42_RS25885 PF06071 Protein of unknown function (DUF933) DM42_RS25895 PF00324 Amino acid permease DM42_RS25910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS25910 PF03466 LysR substrate binding domain DM42_RS25920 PF00005 ABC transporter DM42_RS25920 PF12848 ABC transporter DM42_RS25930 PF00857 Isochorismatase family DM42_RS25935 PF01321 Creatinase/Prolidase N-terminal domain DM42_RS25935 PF00557 Metallopeptidase family M24 DM42_RS25945 PF00486 Transcriptional regulatory protein, C terminal DM42_RS25950 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DM42_RS25950 PF01488 Shikimate / quinate 5-dehydrogenase DM42_RS25950 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DM42_RS25955 PF03462 PCRF domain DM42_RS25955 PF00472 RF-1 domain DM42_RS25960 PF05175 Methyltransferase small domain DM42_RS25960 PF17827 PrmC N-terminal domain DM42_RS25965 PF00462 Glutaredoxin DM42_RS25970 PF02441 Flavoprotein DM42_RS25975 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DM42_RS25980 PF13520 Amino acid permease DM42_RS25985 PF00313 'Cold-shock' DNA-binding domain DM42_RS25990 PF00012 Hsp70 protein DM42_RS26005 PF00440 Bacterial regulatory proteins, tetR family DM42_RS26020 PF05175 Methyltransferase small domain DM42_RS26025 PF07411 Domain of unknown function (DUF1508) DM42_RS26035 PF01433 Peptidase family M1 domain DM42_RS26035 PF11838 ERAP1-like C-terminal domain DM42_RS26040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS26040 PF03466 LysR substrate binding domain DM42_RS26045 PF08240 Alcohol dehydrogenase GroES-like domain DM42_RS26045 PF00107 Zinc-binding dehydrogenase DM42_RS26065 PF06761 Intracellular multiplication and human macrophage-killing DM42_RS26065 PF14331 ImcF-related N-terminal domain DM42_RS26065 PF06744 Type VI secretion protein IcmF C-terminal DM42_RS26075 PF00691 OmpA family DM42_RS26085 PF17871 AAA lid domain DM42_RS26085 PF07724 AAA domain (Cdc48 subfamily) DM42_RS26085 PF00004 ATPase family associated with various cellular activities (AAA) DM42_RS26085 PF10431 C-terminal, D2-small domain, of ClpB protein DM42_RS26095 PF05947 Type VI secretion system, TssF DM42_RS26110 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath DM42_RS26115 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 DM42_RS26130 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE DM42_RS26150 PF00497 Bacterial extracellular solute-binding proteins, family 3 DM42_RS26165 PF04386 Stringent starvation protein B DM42_RS26170 PF00043 Glutathione S-transferase, C-terminal domain DM42_RS26170 PF02798 Glutathione S-transferase, N-terminal domain DM42_RS26175 PF02167 Cytochrome C1 family DM42_RS26180 PF00033 Cytochrome b/b6/petB DM42_RS26180 PF00032 Cytochrome b(C-terminal)/b6/petD DM42_RS26185 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal DM42_RS26185 PF00355 Rieske [2Fe-2S] domain DM42_RS26190 PF01784 NIF3 (NGG1p interacting factor 3) DM42_RS26195 PF17820 PDZ domain DM42_RS26195 PF13180 PDZ domain DM42_RS26200 PF00902 Sec-independent protein translocase protein (TatC) DM42_RS26205 PF02416 mttA/Hcf106 family DM42_RS26210 PF02416 mttA/Hcf106 family DM42_RS26225 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DM42_RS26230 PF01502 Phosphoribosyl-AMP cyclohydrolase DM42_RS26235 PF00977 Histidine biosynthesis protein DM42_RS26240 PF00977 Histidine biosynthesis protein DM42_RS26245 PF00117 Glutamine amidotransferase class-I DM42_RS26250 PF01914 MarC family integral membrane protein DM42_RS26255 PF00475 Imidazoleglycerol-phosphate dehydratase DM42_RS26260 PF00155 Aminotransferase class I and II DM42_RS26265 PF00815 Histidinol dehydrogenase DM42_RS26270 PF01634 ATP phosphoribosyltransferase DM42_RS26275 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DM42_RS26280 PF01722 BolA-like protein DM42_RS26285 PF01061 ABC-2 type transporter DM42_RS26290 PF00005 ABC transporter DM42_RS26310 PF02470 MlaD protein DM42_RS26315 PF02405 Permease MlaE DM42_RS26320 PF00005 ABC transporter DM42_RS26325 PF02581 Thiamine monophosphate synthase DM42_RS26330 PF05690 Thiazole biosynthesis protein ThiG DM42_RS26340 PF01266 FAD dependent oxidoreductase DM42_RS26345 PF00005 ABC transporter DM42_RS26345 PF06472 ABC transporter transmembrane region 2 DM42_RS26355 PF07690 Major Facilitator Superfamily DM42_RS26360 PF01266 FAD dependent oxidoreductase DM42_RS26365 PF02834 LigT like Phosphoesterase DM42_RS26370 PF01235 Sodium:alanine symporter family DM42_RS26375 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DM42_RS26375 PF07992 Pyridine nucleotide-disulphide oxidoreductase DM42_RS26380 PF01645 Conserved region in glutamate synthase DM42_RS26380 PF00310 Glutamine amidotransferases class-II DM42_RS26380 PF04898 Glutamate synthase central domain DM42_RS26380 PF01493 GXGXG motif DM42_RS26395 PF03009 Glycerophosphoryl diester phosphodiesterase family DM42_RS26400 PF00005 ABC transporter DM42_RS26400 PF17912 MalK OB fold domain DM42_RS26405 PF00528 Binding-protein-dependent transport system inner membrane component DM42_RS26410 PF00528 Binding-protein-dependent transport system inner membrane component DM42_RS26415 PF13416 Bacterial extracellular solute-binding protein DM42_RS26420 PF01966 HD domain DM42_RS26420 PF13286 Phosphohydrolase-associated domain DM42_RS26425 PF01761 3-dehydroquinate synthase DM42_RS26430 PF01202 Shikimate kinase DM42_RS26435 PF00263 Bacterial type II and III secretion system protein DM42_RS26435 PF07660 Secretin and TonB N terminus short domain DM42_RS26435 PF03958 Bacterial type II/III secretion system short domain DM42_RS26435 PF11741 AMIN domain DM42_RS26455 PF17092 Penicillin-binding protein OB-like domain DM42_RS26455 PF00905 Penicillin binding protein transpeptidase domain DM42_RS26455 PF00912 Transglycosylase DM42_RS26460 PF01491 Frataxin-like domain DM42_RS26470 PF01794 Ferric reductase like transmembrane component DM42_RS26475 PF00174 Oxidoreductase molybdopterin binding domain DM42_RS26480 PF01578 Cytochrome C assembly protein DM42_RS26485 PF05140 ResB-like family DM42_RS26490 PF00034 Cytochrome c DM42_RS26495 PF01926 50S ribosome-binding GTPase DM42_RS26500 PF00490 Delta-aminolevulinic acid dehydratase DM42_RS26505 PF02683 Cytochrome C biogenesis protein transmembrane region DM42_RS26505 PF11412 Disulphide bond corrector protein DsbC DM42_RS26515 PF01196 Ribosomal protein L17 DM42_RS26520 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DM42_RS26520 PF01000 RNA polymerase Rpb3/RpoA insert domain DM42_RS26520 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DM42_RS26525 PF00163 Ribosomal protein S4/S9 N-terminal domain DM42_RS26525 PF01479 S4 domain DM42_RS26530 PF00411 Ribosomal protein S11 DM42_RS26535 PF00416 Ribosomal protein S13/S18 DM42_RS26540 PF00444 Ribosomal protein L36 DM42_RS26545 PF01176 Translation initiation factor 1A / IF-1 DM42_RS26550 PF00344 SecY translocase DM42_RS26555 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DM42_RS26560 PF00327 Ribosomal protein L30p/L7e DM42_RS26565 PF00333 Ribosomal protein S5, N-terminal domain DM42_RS26565 PF03719 Ribosomal protein S5, C-terminal domain DM42_RS26570 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DM42_RS26575 PF00347 Ribosomal protein L6 DM42_RS26580 PF00410 Ribosomal protein S8 DM42_RS26585 PF00253 Ribosomal protein S14p/S29e DM42_RS26590 PF00281 Ribosomal protein L5 DM42_RS26590 PF00673 ribosomal L5P family C-terminus DM42_RS26595 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DM42_RS26600 PF00238 Ribosomal protein L14p/L23e DM42_RS26605 PF00366 Ribosomal protein S17 DM42_RS26610 PF00831 Ribosomal L29 protein DM42_RS26615 PF00252 Ribosomal protein L16p/L10e DM42_RS26620 PF00189 Ribosomal protein S3, C-terminal domain DM42_RS26620 PF07650 KH domain DM42_RS26625 PF00237 Ribosomal protein L22p/L17e DM42_RS26630 PF00203 Ribosomal protein S19 DM42_RS26635 PF00181 Ribosomal Proteins L2, RNA binding domain DM42_RS26635 PF03947 Ribosomal Proteins L2, C-terminal domain DM42_RS26640 PF00276 Ribosomal protein L23 DM42_RS26645 PF00573 Ribosomal protein L4/L1 family DM42_RS26650 PF00297 Ribosomal protein L3 DM42_RS26655 PF00338 Ribosomal protein S10p/S20e DM42_RS26660 PF00009 Elongation factor Tu GTP binding domain DM42_RS26660 PF03143 Elongation factor Tu C-terminal domain DM42_RS26660 PF03144 Elongation factor Tu domain 2 DM42_RS26665 PF14492 Elongation Factor G, domain II DM42_RS26665 PF00679 Elongation factor G C-terminus DM42_RS26665 PF00009 Elongation factor Tu GTP binding domain DM42_RS26665 PF03764 Elongation factor G, domain IV DM42_RS26665 PF03144 Elongation factor Tu domain 2 DM42_RS26670 PF00177 Ribosomal protein S7p/S5e DM42_RS26675 PF00164 Ribosomal protein S12/S23 DM42_RS26680 PF16124 RecQ zinc-binding DM42_RS26680 PF00570 HRDC domain DM42_RS26680 PF00271 Helicase conserved C-terminal domain DM42_RS26680 PF00270 DEAD/DEAH box helicase DM42_RS26680 PF09382 RQC domain DM42_RS26685 PF04998 RNA polymerase Rpb1, domain 5 DM42_RS26685 PF00623 RNA polymerase Rpb1, domain 2 DM42_RS26685 PF04983 RNA polymerase Rpb1, domain 3 DM42_RS26685 PF05000 RNA polymerase Rpb1, domain 4 DM42_RS26685 PF04997 RNA polymerase Rpb1, domain 1 DM42_RS26690 PF04560 RNA polymerase Rpb2, domain 7 DM42_RS26690 PF04563 RNA polymerase beta subunit DM42_RS26690 PF04561 RNA polymerase Rpb2, domain 2 DM42_RS26690 PF00562 RNA polymerase Rpb2, domain 6 DM42_RS26690 PF04565 RNA polymerase Rpb2, domain 3 DM42_RS26690 PF10385 RNA polymerase beta subunit external 1 domain DM42_RS26695 PF16320 Ribosomal protein L7/L12 dimerisation domain DM42_RS26695 PF00542 Ribosomal protein L7/L12 C-terminal domain DM42_RS26700 PF00466 Ribosomal protein L10 DM42_RS26705 PF00687 Ribosomal protein L1p/L10e family DM42_RS26710 PF03946 Ribosomal protein L11, N-terminal domain DM42_RS26710 PF00298 Ribosomal protein L11, RNA binding domain DM42_RS26715 PF00467 KOW motif DM42_RS26715 PF02357 Transcription termination factor nusG DM42_RS26720 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DM42_RS26730 PF03143 Elongation factor Tu C-terminal domain DM42_RS26730 PF03144 Elongation factor Tu domain 2 DM42_RS26730 PF00009 Elongation factor Tu GTP binding domain DM42_RS26780 PF05138 Phenylacetic acid catabolic protein DM42_RS26785 PF06243 Phenylacetic acid degradation B DM42_RS26790 PF05138 Phenylacetic acid catabolic protein DM42_RS26795 PF01883 Iron-sulfur cluster assembly protein DM42_RS26800 PF00111 2Fe-2S iron-sulfur cluster binding domain DM42_RS26800 PF00175 Oxidoreductase NAD-binding domain DM42_RS26800 PF00970 Oxidoreductase FAD-binding domain DM42_RS26810 PF00440 Bacterial regulatory proteins, tetR family DM42_RS26820 PF13404 AsnC-type helix-turn-helix domain DM42_RS26820 PF01037 Lrp/AsnC ligand binding domain DM42_RS26825 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DM42_RS26840 PF00390 Malic enzyme, N-terminal domain DM42_RS26840 PF03949 Malic enzyme, NAD binding domain DM42_RS26840 PF01515 Phosphate acetyl/butaryl transferase DM42_RS26845 PF00156 Phosphoribosyl transferase domain DM42_RS26850 PF01161 Phosphatidylethanolamine-binding protein DM42_RS26855 PF03358 NADPH-dependent FMN reductase DM42_RS26860 PF01118 Semialdehyde dehydrogenase, NAD binding domain DM42_RS26875 PF03922 OmpW family DM42_RS26880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS26880 PF03466 LysR substrate binding domain DM42_RS26885 PF07690 Major Facilitator Superfamily DM42_RS26890 PF01810 LysE type translocator DM42_RS26895 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DM42_RS26895 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DM42_RS26910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DM42_RS26915 PF02687 FtsX-like permease family DM42_RS26915 PF12704 MacB-like periplasmic core domain DM42_RS26915 PF00005 ABC transporter DM42_RS26925 PF02687 FtsX-like permease family DM42_RS26925 PF12704 MacB-like periplasmic core domain DM42_RS26930 PF03055 Retinal pigment epithelial membrane protein DM42_RS26945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS26945 PF03466 LysR substrate binding domain DM42_RS26950 PF07690 Major Facilitator Superfamily DM42_RS26955 PF13378 Enolase C-terminal domain-like DM42_RS26955 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DM42_RS26965 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DM42_RS26970 PF04972 BON domain DM42_RS26975 PF13580 SIS domain DM42_RS26980 PF02021 Uncharacterised protein family UPF0102 DM42_RS26985 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DM42_RS26990 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DM42_RS26995 PF05036 Sporulation related domain DM42_RS26995 PF03330 Lytic transglycolase DM42_RS27000 PF00753 Metallo-beta-lactamase superfamily DM42_RS27010 PF01037 Lrp/AsnC ligand binding domain DM42_RS27015 PF16916 Dimerisation domain of Zinc Transporter DM42_RS27015 PF01545 Cation efflux family DM42_RS27030 PF07690 Major Facilitator Superfamily DM42_RS27035 PF13458 Periplasmic binding protein DM42_RS27040 PF03060 Nitronate monooxygenase DM42_RS27045 PF01738 Dienelactone hydrolase family DM42_RS27050 PF01425 Amidase DM42_RS27055 PF02219 Methylenetetrahydrofolate reductase DM42_RS27060 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV DM42_RS27065 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DM42_RS27065 PF05221 S-adenosyl-L-homocysteine hydrolase DM42_RS27070 PF04545 Sigma-70, region 4 DM42_RS27070 PF04539 Sigma-70 region 3 DM42_RS27070 PF04542 Sigma-70 region 2 DM42_RS27075 PF10609 NUBPL iron-transfer P-loop NTPase DM42_RS27080 PF00448 SRP54-type protein, GTPase domain DM42_RS27080 PF00448 SRP54-type protein, GTPase domain DM42_RS27085 PF00771 FHIPEP family DM42_RS27090 PF01312 FlhB HrpN YscU SpaS Family DM42_RS27110 PF04344 Chemotaxis phosphatase, CheZ DM42_RS27115 PF00072 Response regulator receiver domain DM42_RS27120 PF01339 CheB methylesterase DM42_RS27120 PF00072 Response regulator receiver domain DM42_RS27125 PF03975 CheD chemotactic sensory transduction DM42_RS27130 PF01739 CheR methyltransferase, SAM binding domain DM42_RS27130 PF03705 CheR methyltransferase, all-alpha domain DM42_RS27135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DM42_RS27135 PF00672 HAMP domain DM42_RS27135 PF02203 Tar ligand binding domain homologue DM42_RS27140 PF01584 CheW-like domain DM42_RS27145 PF01627 Hpt domain DM42_RS27145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM42_RS27145 PF02895 Signal transducing histidine kinase, homodimeric domain DM42_RS27145 PF09078 CheY binding DM42_RS27145 PF01584 CheW-like domain DM42_RS27150 PF00486 Transcriptional regulatory protein, C terminal DM42_RS27150 PF00072 Response regulator receiver domain DM42_RS27155 PF00691 OmpA family DM42_RS27155 PF13677 Membrane MotB of proton-channel complex MotA/MotB DM42_RS27160 PF01618 MotA/TolQ/ExbB proton channel family DM42_RS27165 PF05280 Flagellar transcriptional activator (FlhC) DM42_RS27170 PF05247 Flagellar transcriptional activator (FlhD) DM42_RS27175 PF13439 Glycosyltransferase Family 4 DM42_RS27180 PF00816 H-NS histone family DM42_RS27185 PF00230 Major intrinsic protein DM42_RS27200 PF03352 Methyladenine glycosylase DM42_RS27200 PF00958 GMP synthase C terminal domain DM42_RS27200 PF00117 Glutamine amidotransferase class-I DM42_RS27200 PF13302 Acetyltransferase (GNAT) domain DM42_RS27200 PF13673 Acetyltransferase (GNAT) domain DM42_RS27210 PF00593 TonB dependent receptor DM42_RS27210 PF07715 TonB-dependent Receptor Plug Domain DM42_RS27215 PF01165 Ribosomal protein S21 DM42_RS27220 PF00669 Bacterial flagellin N-terminal helical region DM42_RS27220 PF00700 Bacterial flagellin C-terminal helical region DM42_RS27225 PF07195 Flagellar hook-associated protein 2 C-terminus DM42_RS27225 PF02465 Flagellar hook-associated protein 2 N-terminus DM42_RS27240 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DM42_RS27325 PF07484 Phage Tail Collar Domain DM42_RS27400 PF00589 Phage integrase family DM42_RS27410 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DM42_RS27415 PF01548 Transposase DM42_RS27415 PF02371 Transposase IS116/IS110/IS902 family DM42_RS27420 PF13361 UvrD-like helicase C-terminal domain DM42_RS27420 PF00580 UvrD/REP helicase N-terminal domain DM42_RS27430 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DM42_RS27430 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DM42_RS27440 PF01571 Aminomethyltransferase folate-binding domain DM42_RS27440 PF08669 Glycine cleavage T-protein C-terminal barrel domain DM42_RS27445 PF01597 Glycine cleavage H-protein DM42_RS27450 PF02347 Glycine cleavage system P-protein DM42_RS27460 PF03313 Serine dehydratase alpha chain DM42_RS27460 PF03315 Serine dehydratase beta chain DM42_RS27465 PF01850 PIN domain DM42_RS27480 PF00205 Thiamine pyrophosphate enzyme, central domain DM42_RS27480 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DM42_RS27480 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DM42_RS27490 PF12833 Helix-turn-helix domain DM42_RS27500 PF00171 Aldehyde dehydrogenase family DM42_RS27510 PF07690 Major Facilitator Superfamily DM42_RS27515 PF03466 LysR substrate binding domain DM42_RS27515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS27520 PF05985 Ethanolamine ammonia-lyase light chain (EutC) DM42_RS27525 PF06751 Ethanolamine ammonia lyase large subunit (EutB) DM42_RS27530 PF13520 Amino acid permease DM42_RS27535 PF05552 Conserved TM helix DM42_RS27550 PF00403 Heavy-metal-associated domain DM42_RS27555 PF13411 MerR HTH family regulatory protein DM42_RS27565 PF01565 FAD binding domain DM42_RS27565 PF02913 FAD linked oxidases, C-terminal domain DM42_RS27570 PF00497 Bacterial extracellular solute-binding proteins, family 3 DM42_RS27575 PF00872 Transposase, Mutator family DM42_RS27580 PF02371 Transposase IS116/IS110/IS902 family DM42_RS27580 PF01548 Transposase DM42_RS27585 PF00155 Aminotransferase class I and II DM42_RS27595 PF18158 Adaptive response protein AidB N-terminal domain DM42_RS27595 PF02770 Acyl-CoA dehydrogenase, middle domain DM42_RS27595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DM42_RS27600 PF00501 AMP-binding enzyme DM42_RS27600 PF13193 AMP-binding enzyme C-terminal domain DM42_RS27620 PF13458 Periplasmic binding protein DM42_RS27625 PF18327 Proline utilization A proline dehydrogenase N-terminal domain DM42_RS27625 PF01619 Proline dehydrogenase DM42_RS27625 PF14850 DNA-binding domain of Proline dehydrogenase DM42_RS27625 PF00171 Aldehyde dehydrogenase family DM42_RS27630 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DM42_RS27630 PF17764 3′ DNA-binding domain (3′BD) DM42_RS27630 PF00271 Helicase conserved C-terminal domain DM42_RS27630 PF00270 DEAD/DEAH box helicase DM42_RS27630 PF18074 Primosomal protein N C-terminal domain DM42_RS27635 PF01208 Uroporphyrinogen decarboxylase (URO-D) DM42_RS27640 PF00497 Bacterial extracellular solute-binding proteins, family 3 DM42_RS27645 PF00501 AMP-binding enzyme DM42_RS27645 PF13193 AMP-binding enzyme C-terminal domain DM42_RS27650 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DM42_RS27650 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DM42_RS27655 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DM42_RS27655 PF02874 ATP synthase alpha/beta family, beta-barrel domain DM42_RS27660 PF00231 ATP synthase DM42_RS27665 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DM42_RS27665 PF00306 ATP synthase alpha/beta chain, C terminal domain DM42_RS27665 PF02874 ATP synthase alpha/beta family, beta-barrel domain DM42_RS27670 PF00213 ATP synthase delta (OSCP) subunit DM42_RS27675 PF00430 ATP synthase B/B' CF(0) DM42_RS27680 PF00137 ATP synthase subunit C DM42_RS27685 PF00119 ATP synthase A chain DM42_RS27695 PF03600 Citrate transporter DM42_RS27700 PF02195 ParB-like nuclease domain DM42_RS27700 PF17762 HTH domain found in ParB protein DM42_RS27705 PF13614 AAA domain DM42_RS27710 PF02527 rRNA small subunit methyltransferase G DM42_RS27715 PF13932 GidA associated domain DM42_RS27715 PF01134 Glucose inhibited division protein A DM42_RS27720 PF00005 ABC transporter DM42_RS27725 PF00005 ABC transporter DM42_RS27725 PF12399 Branched-chain amino acid ATP-binding cassette transporter DM42_RS27745 PF02653 Branched-chain amino acid transport system / permease component DM42_RS27755 PF00005 ABC transporter DM42_RS27760 PF12399 Branched-chain amino acid ATP-binding cassette transporter DM42_RS27760 PF00005 ABC transporter DM42_RS27765 PF00732 GMC oxidoreductase DM42_RS27765 PF05199 GMC oxidoreductase DM42_RS27770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS27770 PF03466 LysR substrate binding domain DM42_RS27780 PF01037 Lrp/AsnC ligand binding domain DM42_RS27785 PF00351 Biopterin-dependent aromatic amino acid hydroxylase DM42_RS27790 PF01329 Pterin 4 alpha carbinolamine dehydratase DM42_RS27800 PF00486 Transcriptional regulatory protein, C terminal DM42_RS27800 PF00072 Response regulator receiver domain DM42_RS27805 PF08521 Two-component sensor kinase N-terminal DM42_RS27805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM42_RS27805 PF00512 His Kinase A (phospho-acceptor) domain DM42_RS27815 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DM42_RS27820 PF00117 Glutamine amidotransferase class-I DM42_RS27820 PF02540 NAD synthase DM42_RS27820 PF00958 GMP synthase C terminal domain DM42_RS27830 PF04107 Glutamate-cysteine ligase family 2(GCS2) DM42_RS27840 PF01266 FAD dependent oxidoreductase DM42_RS27840 PF05430 S-adenosyl-L-methionine-dependent methyltransferase DM42_RS27845 PF00216 Bacterial DNA-binding protein DM42_RS27850 PF07683 Cobalamin synthesis protein cobW C-terminal domain DM42_RS27850 PF02492 CobW/HypB/UreG, nucleotide-binding domain DM42_RS27855 PF01464 Transglycosylase SLT domain DM42_RS27860 PF00263 Bacterial type II and III secretion system protein DM42_RS27860 PF03958 Bacterial type II/III secretion system short domain DM42_RS27865 PF00437 Type II/IV secretion system protein DM42_RS27870 PF00482 Type II secretion system (T2SS), protein F DM42_RS27880 PF08334 Type II secretion system (T2SS), protein G DM42_RS27880 PF07963 Prokaryotic N-terminal methylation motif DM42_RS27885 PF12019 Type II transport protein GspH DM42_RS27885 PF07963 Prokaryotic N-terminal methylation motif DM42_RS27890 PF07963 Prokaryotic N-terminal methylation motif DM42_RS27890 PF02501 Type II secretion system (T2SS), protein I DM42_RS27900 PF03934 Type II secretion system (T2SS), protein K DM42_RS27920 PF02321 Outer membrane efflux protein DM42_RS27930 PF01047 MarR family DM42_RS27935 PF07690 Major Facilitator Superfamily DM42_RS27945 PF03466 LysR substrate binding domain DM42_RS27945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS27950 PF03788 LrgA family DM42_RS27955 PF04172 LrgB-like family DM42_RS27965 PF02154 Flagellar motor switch protein FliM DM42_RS27965 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DM42_RS27970 PF16973 Flagellar motor switch protein FliN N-terminal DM42_RS27970 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DM42_RS27975 PF04347 Flagellar biosynthesis protein, FliO DM42_RS27980 PF00813 FliP family DM42_RS27985 PF01313 Bacterial export proteins, family 3 DM42_RS27990 PF01311 Bacterial export proteins, family 1 DM42_RS28000 PF00005 ABC transporter DM42_RS28005 PF00528 Binding-protein-dependent transport system inner membrane component DM42_RS28010 PF00512 His Kinase A (phospho-acceptor) domain DM42_RS28010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM42_RS28015 PF00486 Transcriptional regulatory protein, C terminal DM42_RS28015 PF00072 Response regulator receiver domain DM42_RS28020 PF13609 Gram-negative porin DM42_RS28025 PF18273 Type III R-M EcoP15I C-terminal domain DM42_RS28025 PF01555 DNA methylase DM42_RS28030 PF08774 VRR-NUC domain DM42_RS28030 PF04851 Type III restriction enzyme, res subunit DM42_RS28050 PF10017 Histidine-specific methyltransferase, SAM-dependent DM42_RS28055 PF03781 Sulfatase-modifying factor enzyme 1 DM42_RS28055 PF12867 DinB superfamily DM42_RS28065 PF02627 Carboxymuconolactone decarboxylase family DM42_RS28070 PF04542 Sigma-70 region 2 DM42_RS28070 PF08281 Sigma-70, region 4 DM42_RS28095 PF08281 Sigma-70, region 4 DM42_RS28095 PF04542 Sigma-70 region 2 DM42_RS28100 PF00199 Catalase DM42_RS28105 PF01292 Prokaryotic cytochrome b561 DM42_RS28145 PF00665 Integrase core domain DM42_RS28150 PF01695 IstB-like ATP binding protein DM42_RS28160 PF01580 FtsK/SpoIIIE family DM42_RS28160 PF09397 Ftsk gamma domain DM42_RS28160 PF17854 FtsK alpha domain DM42_RS28160 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DM42_RS28180 PF00204 DNA gyrase B DM42_RS28180 PF18053 DNA gyrase B subunit insert domain DM42_RS28180 PF00986 DNA gyrase B subunit, carboxyl terminus DM42_RS28180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM42_RS28180 PF01751 Toprim domain DM42_RS28185 PF02767 DNA polymerase III beta subunit, central domain DM42_RS28185 PF00712 DNA polymerase III beta subunit, N-terminal domain DM42_RS28185 PF02768 DNA polymerase III beta subunit, C-terminal domain DM42_RS28190 PF00308 Bacterial dnaA protein DM42_RS28190 PF11638 DnaA N-terminal domain DM42_RS28190 PF08299 Bacterial dnaA protein helix-turn-helix DM42_RS28195 PF00468 Ribosomal protein L34 DM42_RS28200 PF00825 Ribonuclease P DM42_RS28205 PF01809 Putative membrane protein insertion efficiency factor DM42_RS28210 PF14849 YidC periplasmic domain DM42_RS28210 PF02096 60Kd inner membrane protein DM42_RS28220 PF12631 MnmE helical domain DM42_RS28220 PF01926 50S ribosome-binding GTPase DM42_RS28220 PF10396 GTP-binding protein TrmE N-terminus DM42_RS28235 PF00360 Phytochrome region DM42_RS28235 PF00990 Diguanylate cyclase, GGDEF domain DM42_RS28235 PF01590 GAF domain DM42_RS28235 PF00563 EAL domain DM42_RS28250 PF13302 Acetyltransferase (GNAT) domain DM42_RS28260 PF07152 YaeQ protein DM42_RS28265 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DM42_RS28270 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DM42_RS28270 PF02805 Metal binding domain of Ada DM42_RS28270 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DM42_RS28270 PF12833 Helix-turn-helix domain DM42_RS28275 PF12833 Helix-turn-helix domain DM42_RS28275 PF06029 AlkA N-terminal domain DM42_RS28275 PF02805 Metal binding domain of Ada DM42_RS28275 PF00730 HhH-GPD superfamily base excision DNA repair protein DM42_RS28280 PF04262 Glutamate-cysteine ligase DM42_RS28290 PF02652 L-lactate permease DM42_RS28295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS28295 PF03466 LysR substrate binding domain DM42_RS28300 PF04185 Phosphoesterase family DM42_RS28300 PF05506 Domain of unknown function (DUF756) DM42_RS28305 PF00392 Bacterial regulatory proteins, gntR family DM42_RS28305 PF07729 FCD domain DM42_RS28310 PF01266 FAD dependent oxidoreductase DM42_RS28315 PF00266 Aminotransferase class-V DM42_RS28320 PF00528 Binding-protein-dependent transport system inner membrane component DM42_RS28325 PF00005 ABC transporter DM42_RS28335 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase DM42_RS28340 PF00171 Aldehyde dehydrogenase family DM42_RS28345 PF00497 Bacterial extracellular solute-binding proteins, family 3 DM42_RS28355 PF00005 ABC transporter DM42_RS28360 PF00561 alpha/beta hydrolase fold DM42_RS28385 PF00589 Phage integrase family DM42_RS28385 PF02899 Phage integrase, N-terminal SAM-like domain DM42_RS28445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS28445 PF03466 LysR substrate binding domain DM42_RS28490 PF07484 Phage Tail Collar Domain DM42_RS28630 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DM42_RS28630 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DM42_RS28635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS28635 PF03466 LysR substrate binding domain DM42_RS28640 PF01131 DNA topoisomerase DM42_RS28640 PF01751 Toprim domain DM42_RS28650 PF17782 DprA winged helix domain DM42_RS28650 PF02481 DNA recombination-mediator protein A DM42_RS28655 PF01327 Polypeptide deformylase DM42_RS28660 PF02911 Formyl transferase, C-terminal domain DM42_RS28660 PF00551 Formyl transferase DM42_RS28665 PF01810 LysE type translocator DM42_RS28670 PF01435 Peptidase family M48 DM42_RS28675 PF01189 16S rRNA methyltransferase RsmB/F DM42_RS28675 PF01029 NusB family DM42_RS28685 PF00672 HAMP domain DM42_RS28685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM42_RS28685 PF00989 PAS fold DM42_RS28685 PF00512 His Kinase A (phospho-acceptor) domain DM42_RS28690 PF00158 Sigma-54 interaction domain DM42_RS28690 PF00072 Response regulator receiver domain DM42_RS28690 PF02954 Bacterial regulatory protein, Fis family DM42_RS28700 PF06508 Queuosine biosynthesis protein QueC DM42_RS28710 PF01242 6-pyruvoyl tetrahydropterin synthase DM42_RS28715 PF03328 HpcH/HpaI aldolase/citrate lyase family DM42_RS28725 PF01098 Cell cycle protein DM42_RS28730 PF00905 Penicillin binding protein transpeptidase domain DM42_RS28730 PF03717 Penicillin-binding Protein dimerisation domain DM42_RS28750 PF02686 Glu-tRNAGln amidotransferase C subunit DM42_RS28755 PF01425 Amidase DM42_RS28760 PF02934 GatB/GatE catalytic domain DM42_RS28760 PF02637 GatB domain DM42_RS28765 PF03976 Polyphosphate kinase 2 (PPK2) DM42_RS28770 PF03372 Endonuclease/Exonuclease/phosphatase family DM42_RS28775 PF08240 Alcohol dehydrogenase GroES-like domain DM42_RS28775 PF00107 Zinc-binding dehydrogenase DM42_RS28780 PF06719 AraC-type transcriptional regulator N-terminus DM42_RS28780 PF12833 Helix-turn-helix domain DM42_RS28790 PF07690 Major Facilitator Superfamily DM42_RS28800 PF00561 alpha/beta hydrolase fold DM42_RS28805 PF00440 Bacterial regulatory proteins, tetR family DM42_RS28815 PF00696 Amino acid kinase family DM42_RS28830 PF02954 Bacterial regulatory protein, Fis family DM42_RS28830 PF00072 Response regulator receiver domain DM42_RS28835 PF00004 ATPase family associated with various cellular activities (AAA) DM42_RS28835 PF07724 AAA domain (Cdc48 subfamily) DM42_RS28840 PF00227 Proteasome subunit DM42_RS28845 PF01258 Prokaryotic dksA/traR C4-type zinc finger DM42_RS28850 PF02492 CobW/HypB/UreG, nucleotide-binding domain DM42_RS28850 PF07683 Cobalamin synthesis protein cobW C-terminal domain DM42_RS28855 PF17785 PUA-like domain DM42_RS28855 PF10672 S-adenosylmethionine-dependent methyltransferase DM42_RS28860 PF02899 Phage integrase, N-terminal SAM-like domain DM42_RS28860 PF00589 Phage integrase family DM42_RS28870 PF01678 Diaminopimelate epimerase DM42_RS28875 PF03279 Bacterial lipid A biosynthesis acyltransferase DM42_RS28880 PF02772 S-adenosylmethionine synthetase, central domain DM42_RS28880 PF02773 S-adenosylmethionine synthetase, C-terminal domain DM42_RS28880 PF00438 S-adenosylmethionine synthetase, N-terminal domain DM42_RS28900 PF00248 Aldo/keto reductase family DM42_RS28920 PF01636 Phosphotransferase enzyme family DM42_RS28925 PF00171 Aldehyde dehydrogenase family DM42_RS28930 PF05199 GMC oxidoreductase DM42_RS28930 PF00732 GMC oxidoreductase DM42_RS28945 PF18269 T3SS EscN ATPase C-terminal domain DM42_RS28945 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DM42_RS28955 PF01706 FliG C-terminal domain DM42_RS28955 PF14842 FliG N-terminal domain DM42_RS28955 PF14841 FliG middle domain DM42_RS28960 PF08345 Flagellar M-ring protein C-terminal DM42_RS28960 PF01514 Secretory protein of YscJ/FliF family DM42_RS28965 PF02049 Flagellar hook-basal body complex protein FliE DM42_RS28970 PF02561 Flagellar protein FliS DM42_RS28985 PF01312 FlhB HrpN YscU SpaS Family DM42_RS29000 PF13520 Amino acid permease DM42_RS29005 PF00072 Response regulator receiver domain DM42_RS29005 PF00196 Bacterial regulatory proteins, luxR family DM42_RS29010 PF07730 Histidine kinase DM42_RS29010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM42_RS29010 PF05231 MASE1 DM42_RS29015 PF00970 Oxidoreductase FAD-binding domain DM42_RS29015 PF00175 Oxidoreductase NAD-binding domain DM42_RS29020 PF03372 Endonuclease/Exonuclease/phosphatase family DM42_RS29030 PF00881 Nitroreductase family DM42_RS29035 PF00004 ATPase family associated with various cellular activities (AAA) DM42_RS29035 PF05362 Lon protease (S16) C-terminal proteolytic domain DM42_RS29035 PF02190 ATP-dependent protease La (LON) substrate-binding domain DM42_RS29040 PF01266 FAD dependent oxidoreductase DM42_RS29045 PF01355 High potential iron-sulfur protein DM42_RS29050 PF07690 Major Facilitator Superfamily DM42_RS29055 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DM42_RS29060 PF00528 Binding-protein-dependent transport system inner membrane component DM42_RS29065 PF12911 N-terminal TM domain of oligopeptide transport permease C DM42_RS29065 PF00528 Binding-protein-dependent transport system inner membrane component DM42_RS29070 PF00005 ABC transporter DM42_RS29070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DM42_RS29075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DM42_RS29075 PF00005 ABC transporter DM42_RS29085 PF03746 LamB/YcsF family DM42_RS29090 PF02626 Carboxyltransferase domain, subdomain A and B DM42_RS29095 PF02682 Carboxyltransferase domain, subdomain C and D DM42_RS29105 PF01812 5-formyltetrahydrofolate cyclo-ligase family DM42_RS29110 PF14718 Soluble lytic murein transglycosylase L domain DM42_RS29110 PF01464 Transglycosylase SLT domain DM42_RS29125 PF01743 Poly A polymerase head domain DM42_RS29125 PF01966 HD domain DM42_RS29125 PF12627 Probable RNA and SrmB- binding site of polymerase A DM42_RS29135 PF00557 Metallopeptidase family M24 DM42_RS29135 PF01321 Creatinase/Prolidase N-terminal domain DM42_RS29155 PF00460 Flagella basal body rod protein DM42_RS29160 PF00460 Flagella basal body rod protein DM42_RS29160 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DM42_RS29165 PF13861 FlgD Tudor-like domain DM42_RS29165 PF13860 FlgD Ig-like domain DM42_RS29165 PF03963 Flagellar hook capping protein - N-terminal region DM42_RS29170 PF00460 Flagella basal body rod protein DM42_RS29170 PF07559 Flagellar basal body protein FlaE DM42_RS29170 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DM42_RS29175 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DM42_RS29175 PF00460 Flagella basal body rod protein DM42_RS29180 PF00460 Flagella basal body rod protein DM42_RS29180 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DM42_RS29185 PF02107 Flagellar L-ring protein DM42_RS29190 PF02119 Flagellar P-ring protein DM42_RS29195 PF10135 Rod binding protein DM42_RS29195 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DM42_RS29200 PF07238 PilZ domain DM42_RS29200 PF07317 Flagellar regulator YcgR DM42_RS29205 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DM42_RS29205 PF00460 Flagella basal body rod protein DM42_RS29210 PF00669 Bacterial flagellin N-terminal helical region DM42_RS29215 PF00860 Permease family DM42_RS29220 PF03466 LysR substrate binding domain DM42_RS29220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS29245 PF13609 Gram-negative porin DM42_RS29255 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DM42_RS29255 PF07992 Pyridine nucleotide-disulphide oxidoreductase DM42_RS29260 PF03783 Curli production assembly/transport component CsgG DM42_RS29270 PF05643 Putative bacterial lipoprotein (DUF799) DM42_RS29275 PF01266 FAD dependent oxidoreductase DM42_RS29280 PF01266 FAD dependent oxidoreductase DM42_RS29290 PF00528 Binding-protein-dependent transport system inner membrane component DM42_RS29295 PF00528 Binding-protein-dependent transport system inner membrane component DM42_RS29300 PF00005 ABC transporter DM42_RS29300 PF08402 TOBE domain DM42_RS29305 PF13416 Bacterial extracellular solute-binding protein DM42_RS29310 PF00202 Aminotransferase class-III DM42_RS29315 PF00120 Glutamine synthetase, catalytic domain DM42_RS29320 PF07722 Peptidase C26 DM42_RS29330 PF00171 Aldehyde dehydrogenase family DM42_RS29345 PF03239 Iron permease FTR1 family DM42_RS29370 PF01380 SIS domain DM42_RS29375 PF00132 Bacterial transferase hexapeptide (six repeats) DM42_RS29375 PF12804 MobA-like NTP transferase domain DM42_RS29380 PF01171 PP-loop family DM42_RS29410 PF00294 pfkB family carbohydrate kinase DM42_RS29420 PF00356 Bacterial regulatory proteins, lacI family DM42_RS29430 PF13593 SBF-like CPA transporter family (DUF4137) DM42_RS29445 PF03466 LysR substrate binding domain DM42_RS29445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS29455 PF03743 Bacterial conjugation TrbI-like protein DM42_RS29460 PF03524 Conjugal transfer protein DM42_RS29470 PF04610 TrbL/VirB6 plasmid conjugal transfer protein DM42_RS29480 PF03135 CagE, TrbE, VirB family, component of type IV transporter system DM42_RS29490 PF04956 TrbC/VIRB2 family DM42_RS29495 PF00437 Type II/IV secretion system protein DM42_RS29515 PF02534 Type IV secretory system Conjugative DNA transfer DM42_RS29525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS29525 PF03466 LysR substrate binding domain DM42_RS29530 PF01012 Electron transfer flavoprotein domain DM42_RS29530 PF00766 Electron transfer flavoprotein FAD-binding domain DM42_RS29535 PF01012 Electron transfer flavoprotein domain DM42_RS29540 PF01575 MaoC like domain DM42_RS29545 PF02770 Acyl-CoA dehydrogenase, middle domain DM42_RS29545 PF12806 Acetyl-CoA dehydrogenase C-terminal like DM42_RS29545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DM42_RS29545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DM42_RS29550 PF07690 Major Facilitator Superfamily DM42_RS29555 PF01527 Transposase DM42_RS29560 PF00665 Integrase core domain DM42_RS29560 PF13276 HTH-like domain DM42_RS29560 PF13333 Integrase core domain DM42_RS29575 PF02770 Acyl-CoA dehydrogenase, middle domain DM42_RS29575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DM42_RS29575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DM42_RS29580 PF02515 CoA-transferase family III DM42_RS29585 PF13193 AMP-binding enzyme C-terminal domain DM42_RS29585 PF00501 AMP-binding enzyme DM42_RS29590 PF00108 Thiolase, N-terminal domain DM42_RS29590 PF02803 Thiolase, C-terminal domain DM42_RS29595 PF00378 Enoyl-CoA hydratase/isomerase DM42_RS29600 PF00106 short chain dehydrogenase DM42_RS29605 PF00378 Enoyl-CoA hydratase/isomerase DM42_RS29615 PF10502 Signal peptidase, peptidase S26 DM42_RS29630 PF13614 AAA domain DM42_RS29655 PF01381 Helix-turn-helix DM42_RS29660 PF05284 Protein of unknown function (DUF736) DM42_RS29665 PF07690 Major Facilitator Superfamily DM42_RS29680 PF02195 ParB-like nuclease domain DM42_RS29685 PF06067 Domain of unknown function (DUF932) DM42_RS29695 PF04002 RadC-like JAB domain DM42_RS29700 PF17761 DUF1016 N-terminal domain DM42_RS29700 PF06250 YhcG PDDEXK nuclease domain DM42_RS29715 PF00561 alpha/beta hydrolase fold DM42_RS29720 PF01037 Lrp/AsnC ligand binding domain DM42_RS29740 PF00682 HMGL-like DM42_RS29745 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DM42_RS29760 PF10518 TAT (twin-arginine translocation) pathway signal sequence DM42_RS29760 PF00111 2Fe-2S iron-sulfur cluster binding domain DM42_RS29760 PF01799 [2Fe-2S] binding domain DM42_RS29765 PF03450 CO dehydrogenase flavoprotein C-terminal domain DM42_RS29765 PF00941 FAD binding domain in molybdopterin dehydrogenase DM42_RS29770 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DM42_RS29770 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DM42_RS29775 PF03466 LysR substrate binding domain DM42_RS29775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS29780 PF00043 Glutathione S-transferase, C-terminal domain DM42_RS29780 PF02798 Glutathione S-transferase, N-terminal domain DM42_RS29790 PF03466 LysR substrate binding domain DM42_RS29790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS29805 PF00701 Dihydrodipicolinate synthetase family DM42_RS29815 PF07885 Ion channel DM42_RS29815 PF17655 Inward rectifier potassium channel C-terminal domain DM42_RS29820 PF00043 Glutathione S-transferase, C-terminal domain DM42_RS29820 PF02798 Glutathione S-transferase, N-terminal domain DM42_RS29825 PF14602 Hexapeptide repeat of succinyl-transferase DM42_RS29825 PF12464 Maltose acetyltransferase DM42_RS29835 PF00999 Sodium/hydrogen exchanger family DM42_RS29840 PF05231 MASE1 DM42_RS29840 PF00563 EAL domain DM42_RS29855 PF03932 CutC family DM42_RS29870 PF02626 Carboxyltransferase domain, subdomain A and B DM42_RS29880 PF02785 Biotin carboxylase C-terminal domain DM42_RS29880 PF00289 Biotin carboxylase, N-terminal domain DM42_RS29880 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DM42_RS29885 PF00364 Biotin-requiring enzyme DM42_RS29890 PF03746 LamB/YcsF family DM42_RS29895 PF03466 LysR substrate binding domain DM42_RS29895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS29900 PF06968 Biotin and Thiamin Synthesis associated domain DM42_RS29900 PF04055 Radical SAM superfamily DM42_RS29910 PF00155 Aminotransferase class I and II DM42_RS29915 PF00202 Aminotransferase class-III DM42_RS29930 PF00106 short chain dehydrogenase DM42_RS29935 PF00484 Carbonic anhydrase DM42_RS29940 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) DM42_RS29950 PF00005 ABC transporter DM42_RS29950 PF16326 ABC transporter C-terminal domain DM42_RS29950 PF12848 ABC transporter DM42_RS29955 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DM42_RS29960 PF00106 short chain dehydrogenase DM42_RS29965 PF13462 Thioredoxin DM42_RS29975 PF05746 DALR anticodon binding domain DM42_RS29975 PF00750 tRNA synthetases class I (R) DM42_RS29975 PF03485 Arginyl tRNA synthetase N terminal domain DM42_RS29990 PF02310 B12 binding domain DM42_RS29990 PF02965 Vitamin B12 dependent methionine synthase, activation domain DM42_RS29990 PF02607 B12 binding domain DM42_RS29990 PF00809 Pterin binding enzyme DM42_RS29990 PF02574 Homocysteine S-methyltransferase DM42_RS29995 PF02574 Homocysteine S-methyltransferase DM42_RS29995 PF02607 B12 binding domain DM42_RS29995 PF00809 Pterin binding enzyme DM42_RS29995 PF02965 Vitamin B12 dependent methionine synthase, activation domain DM42_RS29995 PF02310 B12 binding domain DM42_RS30000 PF12091 Protein of unknown function (DUF3567) DM42_RS30020 PF00378 Enoyl-CoA hydratase/isomerase DM42_RS30040 PF01467 Cytidylyltransferase-like DM42_RS30050 PF03309 Type III pantothenate kinase DM42_RS30055 PF02237 Biotin protein ligase C terminal domain DM42_RS30055 PF03099 Biotin/lipoate A/B protein ligase family DM42_RS30055 PF08279 HTH domain DM42_RS30065 PF00149 Calcineurin-like phosphoesterase DM42_RS30065 PF02872 5'-nucleotidase, C-terminal domain DM42_RS30070 PF02405 Permease MlaE DM42_RS30075 PF00005 ABC transporter DM42_RS30105 PF00768 D-alanyl-D-alanine carboxypeptidase DM42_RS30105 PF07943 Penicillin-binding protein 5, C-terminal domain DM42_RS30110 PF01063 Amino-transferase class IV DM42_RS30115 PF04359 Protein of unknown function (DUF493) DM42_RS30120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS30120 PF03466 LysR substrate binding domain DM42_RS30130 PF03099 Biotin/lipoate A/B protein ligase family DM42_RS30135 PF04055 Radical SAM superfamily DM42_RS30135 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DM42_RS30140 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DM42_RS30145 PF00005 ABC transporter DM42_RS30150 PF00528 Binding-protein-dependent transport system inner membrane component DM42_RS30160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS30160 PF03466 LysR substrate binding domain DM42_RS30165 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DM42_RS30165 PF00378 Enoyl-CoA hydratase/isomerase DM42_RS30165 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DM42_RS30170 PF02770 Acyl-CoA dehydrogenase, middle domain DM42_RS30170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DM42_RS30170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DM42_RS30175 PF02770 Acyl-CoA dehydrogenase, middle domain DM42_RS30175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DM42_RS30175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DM42_RS30180 PF02515 CoA-transferase family III DM42_RS30190 PF00474 Sodium:solute symporter family DM42_RS30195 PF00375 Sodium:dicarboxylate symporter family DM42_RS30200 PF00512 His Kinase A (phospho-acceptor) domain DM42_RS30200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM42_RS30200 PF02743 Cache domain DM42_RS30205 PF00072 Response regulator receiver domain DM42_RS30205 PF02954 Bacterial regulatory protein, Fis family DM42_RS30205 PF00158 Sigma-54 interaction domain DM42_RS30210 PF00578 AhpC/TSA family DM42_RS30220 PF01078 Magnesium chelatase, subunit ChlI DM42_RS30220 PF13335 Magnesium chelatase, subunit ChlI C-terminal DM42_RS30225 PF04380 Membrane fusogenic activity DM42_RS30230 PF00543 Nitrogen regulatory protein P-II DM42_RS30235 PF00909 Ammonium Transporter Family DM42_RS30245 PF02951 Prokaryotic glutathione synthetase, N-terminal domain DM42_RS30245 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain DM42_RS30255 PF00381 PTS HPr component phosphorylation site DM42_RS30260 PF02896 PEP-utilising enzyme, TIM barrel domain DM42_RS30260 PF00391 PEP-utilising enzyme, mobile domain DM42_RS30260 PF05524 PEP-utilising enzyme, N-terminal DM42_RS30265 PF00899 ThiF family DM42_RS30270 PF13180 PDZ domain DM42_RS30270 PF03572 Peptidase family S41 DM42_RS30275 PF00300 Histidine phosphatase superfamily (branch 1) DM42_RS30280 PF00581 Rhodanese-like domain DM42_RS30285 PF00462 Glutaredoxin DM42_RS30290 PF02556 Preprotein translocase subunit SecB DM42_RS30295 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DM42_RS30295 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DM42_RS30300 PF01661 Macro domain DM42_RS30305 PF00588 SpoU rRNA Methylase family DM42_RS30310 PF00156 Phosphoribosyl transferase domain DM42_RS30315 PF08241 Methyltransferase domain DM42_RS30325 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DM42_RS30325 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DM42_RS30330 PF00115 Cytochrome C and Quinol oxidase polypeptide I DM42_RS30340 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 DM42_RS30350 PF00510 Cytochrome c oxidase subunit III DM42_RS30370 PF02628 Cytochrome oxidase assembly protein DM42_RS30375 PF01040 UbiA prenyltransferase family DM42_RS30380 PF02630 SCO1/SenC DM42_RS30390 PF02203 Tar ligand binding domain homologue DM42_RS30390 PF00672 HAMP domain DM42_RS30390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DM42_RS30395 PF03180 NLPA lipoprotein DM42_RS30415 PF00005 ABC transporter DM42_RS30430 PF02811 PHP domain DM42_RS30430 PF07733 Bacterial DNA polymerase III alpha NTPase domain DM42_RS30430 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DM42_RS30430 PF14579 Helix-hairpin-helix motif DM42_RS30435 PF07702 UTRA domain DM42_RS30435 PF00392 Bacterial regulatory proteins, gntR family DM42_RS30440 PF01979 Amidohydrolase family DM42_RS30445 PF01380 SIS domain DM42_RS30450 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DM42_RS30450 PF02896 PEP-utilising enzyme, TIM barrel domain DM42_RS30450 PF00391 PEP-utilising enzyme, mobile domain DM42_RS30450 PF00381 PTS HPr component phosphorylation site DM42_RS30450 PF05524 PEP-utilising enzyme, N-terminal DM42_RS30455 PF00367 phosphotransferase system, EIIB DM42_RS30455 PF02378 Phosphotransferase system, EIIC DM42_RS30455 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DM42_RS30460 PF02838 Glycosyl hydrolase family 20, domain 2 DM42_RS30460 PF00728 Glycosyl hydrolase family 20, catalytic domain DM42_RS30460 PF03173 Putative carbohydrate binding domain DM42_RS30460 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain DM42_RS30470 PF02322 Cytochrome bd terminal oxidase subunit II DM42_RS30475 PF01654 Cytochrome bd terminal oxidase subunit I DM42_RS30485 PF00140 Sigma-70 factor, region 1.2 DM42_RS30485 PF04545 Sigma-70, region 4 DM42_RS30485 PF04542 Sigma-70 region 2 DM42_RS30490 PF09411 Lipid A 3-O-deacylase (PagL) DM42_RS30500 PF08502 LeuA allosteric (dimerisation) domain DM42_RS30500 PF00682 HMGL-like DM42_RS30505 PF02885 Glycosyl transferase family, helical bundle domain DM42_RS30510 PF14497 Glutathione S-transferase, C-terminal domain DM42_RS30510 PF02798 Glutathione S-transferase, N-terminal domain DM42_RS30515 PF02881 SRP54-type protein, helical bundle domain DM42_RS30515 PF00448 SRP54-type protein, GTPase domain DM42_RS30525 PF01467 Cytidylyltransferase-like DM42_RS30530 PF00037 4Fe-4S binding domain DM42_RS30535 PF00155 Aminotransferase class I and II DM42_RS30540 PF01195 Peptidyl-tRNA hydrolase DM42_RS30545 PF14693 Ribosomal protein TL5, C-terminal domain DM42_RS30545 PF01386 Ribosomal L25p family DM42_RS30550 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DM42_RS30550 PF14572 Phosphoribosyl synthetase-associated domain DM42_RS30560 PF08544 GHMP kinases C terminal DM42_RS30560 PF00288 GHMP kinases N terminal domain DM42_RS30565 PF03550 Outer membrane lipoprotein LolB DM42_RS30575 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DM42_RS30575 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DM42_RS30575 PF06827 Zinc finger found in FPG and IleRS DM42_RS30580 PF14815 NUDIX domain DM42_RS30580 PF00730 HhH-GPD superfamily base excision DNA repair protein DM42_RS30580 PF00633 Helix-hairpin-helix motif DM42_RS30580 PF10576 Iron-sulfur binding domain of endonuclease III DM42_RS30590 PF03668 P-loop ATPase protein family DM42_RS30595 PF07475 HPr Serine kinase C-terminal domain DM42_RS30595 PF02603 HPr Serine kinase N terminus DM42_RS30600 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DM42_RS30605 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DM42_RS30610 PF04552 Sigma-54, DNA binding domain DM42_RS30610 PF00309 Sigma-54 factor, Activator interacting domain (AID) DM42_RS30610 PF04963 Sigma-54 factor, core binding domain DM42_RS30615 PF00005 ABC transporter DM42_RS30615 PF12399 Branched-chain amino acid ATP-binding cassette transporter DM42_RS30635 PF00571 CBS domain DM42_RS30635 PF01380 SIS domain DM42_RS30640 PF00999 Sodium/hydrogen exchanger family DM42_RS30640 PF02080 TrkA-C domain DM42_RS30640 PF02254 TrkA-N domain DM42_RS30645 PF00156 Phosphoribosyl transferase domain DM42_RS30650 PF01810 LysE type translocator DM42_RS30660 PF00551 Formyl transferase DM42_RS30670 PF17760 UvrA interaction domain DM42_RS30670 PF17755 UvrA DNA-binding domain DM42_RS30675 PF07690 Major Facilitator Superfamily DM42_RS30680 PF00436 Single-strand binding protein family DM42_RS30685 PF03167 Uracil DNA glycosylase superfamily DM42_RS30690 PF02245 Methylpurine-DNA glycosylase (MPG) DM42_RS30705 PF02803 Thiolase, C-terminal domain DM42_RS30705 PF00108 Thiolase, N-terminal domain DM42_RS30710 PF00106 short chain dehydrogenase DM42_RS30735 PF02801 Beta-ketoacyl synthase, C-terminal domain DM42_RS30735 PF00109 Beta-ketoacyl synthase, N-terminal domain DM42_RS30740 PF01522 Polysaccharide deacetylase DM42_RS30760 PF07977 FabA-like domain DM42_RS30790 PF01435 Peptidase family M48 DM42_RS30795 PF02652 L-lactate permease DM42_RS30800 PF11870 Domain of unknown function (DUF3390) DM42_RS30800 PF02589 LUD domain DM42_RS30800 PF13183 4Fe-4S dicluster domain DM42_RS30805 PF02589 LUD domain DM42_RS30810 PF02754 Cysteine-rich domain DM42_RS30815 PF07729 FCD domain DM42_RS30815 PF00392 Bacterial regulatory proteins, gntR family DM42_RS30820 PF13091 PLD-like domain DM42_RS30825 PF00596 Class II Aldolase and Adducin N-terminal domain DM42_RS30840 PF07859 alpha/beta hydrolase fold DM42_RS30850 PF07690 Major Facilitator Superfamily DM42_RS30870 PF01380 SIS domain DM42_RS30870 PF01418 Helix-turn-helix domain, rpiR family DM42_RS30870 PF02685 Glucokinase DM42_RS30875 PF07969 Amidohydrolase family DM42_RS30880 PF01042 Endoribonuclease L-PSP DM42_RS30885 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term DM42_RS30885 PF14489 QueF-like protein DM42_RS30890 PF00291 Pyridoxal-phosphate dependent enzyme DM42_RS30890 PF00585 C-terminal regulatory domain of Threonine dehydratase DM42_RS30910 PF01209 ubiE/COQ5 methyltransferase family DM42_RS30925 PF03109 ABC1 family DM42_RS30930 PF05724 Thiopurine S-methyltransferase (TPMT) DM42_RS30945 PF00152 tRNA synthetases class II (D, K and N) DM42_RS30945 PF02938 GAD domain DM42_RS30945 PF01336 OB-fold nucleic acid binding domain DM42_RS30950 PF00293 NUDIX domain DM42_RS30955 PF13091 PLD-like domain DM42_RS30965 PF02770 Acyl-CoA dehydrogenase, middle domain DM42_RS30965 PF12806 Acetyl-CoA dehydrogenase C-terminal like DM42_RS30965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DM42_RS30965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DM42_RS30970 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DM42_RS30970 PF00378 Enoyl-CoA hydratase/isomerase DM42_RS30970 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DM42_RS30975 PF02803 Thiolase, C-terminal domain DM42_RS30975 PF00108 Thiolase, N-terminal domain DM42_RS30980 PF00378 Enoyl-CoA hydratase/isomerase DM42_RS30985 PF02634 FdhD/NarQ family DM42_RS30995 PF03061 Thioesterase superfamily DM42_RS31000 PF00664 ABC transporter transmembrane region DM42_RS31000 PF00005 ABC transporter DM42_RS31005 PF00483 Nucleotidyl transferase DM42_RS31010 PF01636 Phosphotransferase enzyme family DM42_RS31015 PF04453 LPS transport system D DM42_RS31020 PF09312 SurA N-terminal domain DM42_RS31025 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DM42_RS31030 PF00398 Ribosomal RNA adenine dimethylase DM42_RS31040 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DM42_RS31050 PF01553 Acyltransferase DM42_RS31060 PF02092 Glycyl-tRNA synthetase beta subunit DM42_RS31060 PF05746 DALR anticodon binding domain DM42_RS31065 PF02091 Glycyl-tRNA synthetase alpha subunit DM42_RS31075 PF00795 Carbon-nitrogen hydrolase DM42_RS31080 PF00571 CBS domain DM42_RS31080 PF03471 Transporter associated domain DM42_RS31085 PF04752 ChaC-like protein DM42_RS31090 PF02130 Uncharacterized protein family UPF0054 DM42_RS31095 PF02562 PhoH-like protein DM42_RS31100 PF00919 Uncharacterized protein family UPF0004 DM42_RS31100 PF04055 Radical SAM superfamily DM42_RS31100 PF01938 TRAM domain DM42_RS31105 PF03466 LysR substrate binding domain DM42_RS31105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS31110 PF07690 Major Facilitator Superfamily DM42_RS31115 PF01381 Helix-turn-helix DM42_RS31115 PF07883 Cupin domain DM42_RS31120 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DM42_RS31125 PF13419 Haloacid dehalogenase-like hydrolase DM42_RS31130 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DM42_RS31130 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DM42_RS31145 PF00356 Bacterial regulatory proteins, lacI family DM42_RS31155 PF00355 Rieske [2Fe-2S] domain DM42_RS31160 PF07992 Pyridine nucleotide-disulphide oxidoreductase DM42_RS31160 PF14759 Reductase C-terminal DM42_RS31165 PF00230 Major intrinsic protein DM42_RS31170 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DM42_RS31170 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DM42_RS31175 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DM42_RS31175 PF01266 FAD dependent oxidoreductase DM42_RS31190 PF08220 DeoR-like helix-turn-helix domain DM42_RS31190 PF00455 DeoR C terminal sensor domain DM42_RS31210 PF00270 DEAD/DEAH box helicase DM42_RS31210 PF00271 Helicase conserved C-terminal domain DM42_RS31215 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DM42_RS31215 PF00034 Cytochrome c DM42_RS31220 PF00034 Cytochrome c DM42_RS31225 PF05425 Copper resistance protein D DM42_RS31230 PF13378 Enolase C-terminal domain-like DM42_RS31230 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DM42_RS31235 PF07729 FCD domain DM42_RS31235 PF00392 Bacterial regulatory proteins, gntR family DM42_RS31240 PF06906 Protein of unknown function (DUF1272) DM42_RS31255 PF03466 LysR substrate binding domain DM42_RS31255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS31270 PF01965 DJ-1/PfpI family DM42_RS31275 PF01965 DJ-1/PfpI family DM42_RS31275 PF12833 Helix-turn-helix domain DM42_RS31280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS31280 PF03466 LysR substrate binding domain DM42_RS31290 PF00083 Sugar (and other) transporter DM42_RS31290 PF08946 Osmosensory transporter coiled coil DM42_RS31295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM42_RS31295 PF00512 His Kinase A (phospho-acceptor) domain DM42_RS31300 PF00486 Transcriptional regulatory protein, C terminal DM42_RS31300 PF00072 Response regulator receiver domain DM42_RS31305 PF00154 recA bacterial DNA recombination protein DM42_RS31310 PF02631 RecX family DM42_RS31320 PF00549 CoA-ligase DM42_RS31320 PF08442 ATP-grasp domain DM42_RS31325 PF02629 CoA binding domain DM42_RS31325 PF00549 CoA-ligase DM42_RS31330 PF03741 Integral membrane protein TerC family DM42_RS31335 PF00114 Pilin (bacterial filament) DM42_RS31335 PF07963 Prokaryotic N-terminal methylation motif DM42_RS31350 PF01967 MoaC family DM42_RS31355 PF13181 Tetratricopeptide repeat DM42_RS31355 PF01435 Peptidase family M48 DM42_RS31360 PF13333 Integrase core domain DM42_RS31360 PF00665 Integrase core domain DM42_RS31360 PF13276 HTH-like domain DM42_RS31375 PF00561 alpha/beta hydrolase fold DM42_RS31385 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DM42_RS31395 PF01063 Amino-transferase class IV DM42_RS31410 PF00162 Phosphoglycerate kinase DM42_RS31415 PF00224 Pyruvate kinase, barrel domain DM42_RS31415 PF02887 Pyruvate kinase, alpha/beta domain DM42_RS31420 PF01116 Fructose-bisphosphate aldolase class-II DM42_RS31425 PF01259 SAICAR synthetase DM42_RS31430 PF00731 AIR carboxylase DM42_RS31435 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DM42_RS31435 PF02222 ATP-grasp domain DM42_RS31440 PF01300 Telomere recombination DM42_RS31440 PF03481 Putative GTP-binding controlling metal-binding DM42_RS31450 PF04116 Fatty acid hydroxylase superfamily DM42_RS31455 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family DM42_RS31460 PF00072 Response regulator receiver domain DM42_RS31460 PF00486 Transcriptional regulatory protein, C terminal DM42_RS31465 PF00512 His Kinase A (phospho-acceptor) domain DM42_RS31465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM42_RS31470 PF13180 PDZ domain DM42_RS31490 PF12833 Helix-turn-helix domain DM42_RS31490 PF01965 DJ-1/PfpI family DM42_RS31500 PF00440 Bacterial regulatory proteins, tetR family DM42_RS31500 PF08361 MAATS-type transcriptional repressor, C-terminal region DM42_RS31505 PF00529 HlyD membrane-fusion protein of T1SS DM42_RS31505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DM42_RS31510 PF00873 AcrB/AcrD/AcrF family DM42_RS31515 PF02321 Outer membrane efflux protein DM42_RS31520 PF00860 Permease family DM42_RS31525 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DM42_RS31525 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DM42_RS31530 PF08240 Alcohol dehydrogenase GroES-like domain DM42_RS31530 PF00107 Zinc-binding dehydrogenase DM42_RS31535 PF00756 Putative esterase DM42_RS31540 PF00950 ABC 3 transport family DM42_RS31545 PF00005 ABC transporter DM42_RS31555 PF01475 Ferric uptake regulator family DM42_RS31565 PF00294 pfkB family carbohydrate kinase DM42_RS31570 PF08013 Tagatose 6 phosphate kinase DM42_RS31580 PF00528 Binding-protein-dependent transport system inner membrane component DM42_RS31585 PF00528 Binding-protein-dependent transport system inner membrane component DM42_RS31590 PF13419 Haloacid dehalogenase-like hydrolase DM42_RS31595 PF17912 MalK OB fold domain DM42_RS31595 PF00005 ABC transporter DM42_RS31600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS31600 PF03466 LysR substrate binding domain DM42_RS31605 PF00144 Beta-lactamase DM42_RS31610 PF07690 Major Facilitator Superfamily DM42_RS31615 PF04198 Putative sugar-binding domain DM42_RS31615 PF00325 Bacterial regulatory proteins, crp family DM42_RS31620 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DM42_RS31620 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DM42_RS31625 PF08125 Mannitol dehydrogenase C-terminal domain DM42_RS31625 PF01232 Mannitol dehydrogenase Rossmann domain DM42_RS31630 PF03466 LysR substrate binding domain DM42_RS31630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS31635 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DM42_RS31635 PF00205 Thiamine pyrophosphate enzyme, central domain DM42_RS31635 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DM42_RS31640 PF00171 Aldehyde dehydrogenase family DM42_RS31645 PF08546 Ketopantoate reductase PanE/ApbA C terminal DM42_RS31645 PF02558 Ketopantoate reductase PanE/ApbA DM42_RS31650 PF07690 Major Facilitator Superfamily DM42_RS31655 PF03301 Tryptophan 2,3-dioxygenase DM42_RS31660 PF00266 Aminotransferase class-V DM42_RS31665 PF04199 Putative cyclase DM42_RS31670 PF01037 Lrp/AsnC ligand binding domain DM42_RS31675 PF01613 Flavin reductase like domain DM42_RS31695 PF01625 Peptide methionine sulfoxide reductase DM42_RS31710 PF01243 Pyridoxamine 5'-phosphate oxidase DM42_RS31710 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DM42_RS31715 PF00899 ThiF family DM42_RS31720 PF00085 Thioredoxin DM42_RS31725 PF05726 Pirin C-terminal cupin domain DM42_RS31725 PF02678 Pirin DM42_RS31735 PF00892 EamA-like transporter family DM42_RS31740 PF11741 AMIN domain DM42_RS31740 PF01520 N-acetylmuramoyl-L-alanine amidase DM42_RS31745 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DM42_RS31750 PF08331 Domain of unknown function (DUF1730) DM42_RS31760 PF00589 Phage integrase family DM42_RS31760 PF02899 Phage integrase, N-terminal SAM-like domain DM42_RS31765 PF00501 AMP-binding enzyme DM42_RS31765 PF13193 AMP-binding enzyme C-terminal domain DM42_RS31770 PF04073 Aminoacyl-tRNA editing domain DM42_RS31775 PF02660 Glycerol-3-phosphate acyltransferase DM42_RS31780 PF04461 Protein of unknown function (DUF520) DM42_RS31785 PF01565 FAD binding domain DM42_RS31785 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DM42_RS31790 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DM42_RS31790 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DM42_RS31800 PF01649 Ribosomal protein S20 DM42_RS31805 PF03023 Lipid II flippase MurJ DM42_RS31810 PF13369 Transglutaminase-like superfamily DM42_RS31815 PF05191 Adenylate kinase, active site lid DM42_RS31820 PF02348 Cytidylyltransferase DM42_RS31825 PF03966 Trm112p-like protein DM42_RS31830 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DM42_RS31835 PF13742 OB-fold nucleic acid binding domain DM42_RS31835 PF02601 Exonuclease VII, large subunit DM42_RS31840 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DM42_RS31840 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DM42_RS31860 PF02558 Ketopantoate reductase PanE/ApbA DM42_RS31860 PF08546 Ketopantoate reductase PanE/ApbA C terminal DM42_RS31875 PF07690 Major Facilitator Superfamily DM42_RS31890 PF02515 CoA-transferase family III DM42_RS31895 PF00392 Bacterial regulatory proteins, gntR family DM42_RS31895 PF07702 UTRA domain DM42_RS31900 PF00248 Aldo/keto reductase family DM42_RS31910 PF03824 High-affinity nickel-transport protein DM42_RS31915 PF00009 Elongation factor Tu GTP binding domain DM42_RS31915 PF00679 Elongation factor G C-terminus DM42_RS31915 PF03764 Elongation factor G, domain IV DM42_RS31915 PF03144 Elongation factor Tu domain 2 DM42_RS31915 PF14492 Elongation Factor G, domain II DM42_RS31925 PF00849 RNA pseudouridylate synthase DM42_RS31935 PF00180 Isocitrate/isopropylmalate dehydrogenase DM42_RS31940 PF03971 Monomeric isocitrate dehydrogenase DM42_RS31950 PF07731 Multicopper oxidase DM42_RS31950 PF07732 Multicopper oxidase DM42_RS31955 PF00313 'Cold-shock' DNA-binding domain DM42_RS31960 PF02617 ATP-dependent Clp protease adaptor protein ClpS DM42_RS31965 PF00004 ATPase family associated with various cellular activities (AAA) DM42_RS31965 PF17871 AAA lid domain DM42_RS31965 PF02861 Clp amino terminal domain, pathogenicity island component DM42_RS31965 PF07724 AAA domain (Cdc48 subfamily) DM42_RS31965 PF10431 C-terminal, D2-small domain, of ClpB protein DM42_RS31970 PF00324 Amino acid permease DM42_RS31980 PF00692 dUTPase DM42_RS31985 PF04127 DNA / pantothenate metabolism flavoprotein DM42_RS31985 PF02441 Flavoprotein DM42_RS31990 PF01252 Signal peptidase (SPase) II DM42_RS31995 PF06827 Zinc finger found in FPG and IleRS DM42_RS31995 PF08264 Anticodon-binding domain of tRNA DM42_RS31995 PF00133 tRNA synthetases class I (I, L, M and V) DM42_RS32000 PF01687 Riboflavin kinase DM42_RS32000 PF06574 FAD synthetase DM42_RS32005 PF00551 Formyl transferase DM42_RS32010 PF01029 NusB family DM42_RS32010 PF01189 16S rRNA methyltransferase RsmB/F DM42_RS32015 PF12794 Mechanosensitive ion channel inner membrane domain 1 DM42_RS32015 PF12795 Mechanosensitive ion channel porin domain DM42_RS32015 PF00924 Mechanosensitive ion channel DM42_RS32025 PF02445 Quinolinate synthetase A protein DM42_RS32030 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DM42_RS32030 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DM42_RS32035 PF02910 Fumarate reductase flavoprotein C-term DM42_RS32035 PF00890 FAD binding domain DM42_RS32040 PF00471 Ribosomal protein L33 DM42_RS32045 PF00830 Ribosomal L28 family DM42_RS32050 PF04002 RadC-like JAB domain DM42_RS32055 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DM42_RS32060 PF02401 LytB protein DM42_RS32070 PF02653 Branched-chain amino acid transport system / permease component DM42_RS32075 PF11862 Domain of unknown function (DUF3382) DM42_RS32075 PF02653 Branched-chain amino acid transport system / permease component DM42_RS32080 PF12399 Branched-chain amino acid ATP-binding cassette transporter DM42_RS32080 PF00005 ABC transporter DM42_RS32085 PF00005 ABC transporter DM42_RS32095 PF00583 Acetyltransferase (GNAT) family DM42_RS32100 PF00202 Aminotransferase class-III DM42_RS32105 PF00111 2Fe-2S iron-sulfur cluster binding domain DM42_RS32105 PF00970 Oxidoreductase FAD-binding domain DM42_RS32105 PF00175 Oxidoreductase NAD-binding domain DM42_RS32120 PF01479 S4 domain DM42_RS32120 PF00849 RNA pseudouridylate synthase DM42_RS32135 PF00106 short chain dehydrogenase DM42_RS32140 PF03466 LysR substrate binding domain DM42_RS32140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS32145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS32145 PF03466 LysR substrate binding domain DM42_RS32155 PF00106 short chain dehydrogenase DM42_RS32165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS32165 PF03466 LysR substrate binding domain DM42_RS32180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS32180 PF03466 LysR substrate binding domain DM42_RS32195 PF01507 Phosphoadenosine phosphosulfate reductase family DM42_RS32200 PF01507 Phosphoadenosine phosphosulfate reductase family DM42_RS32205 PF00009 Elongation factor Tu GTP binding domain DM42_RS32210 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DM42_RS32210 PF14824 Sirohaem biosynthesis protein central DM42_RS32210 PF10414 Sirohaem synthase dimerisation region DM42_RS32230 PF00883 Cytosol aminopeptidase family, catalytic domain DM42_RS32230 PF02789 Cytosol aminopeptidase family, N-terminal domain DM42_RS32235 PF04364 DNA polymerase III chi subunit, HolC DM42_RS32245 PF00034 Cytochrome c DM42_RS32250 PF00920 Dehydratase family DM42_RS32255 PF03466 LysR substrate binding domain DM42_RS32255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS32260 PF01790 Prolipoprotein diacylglyceryl transferase DM42_RS32275 PF05164 Cell division protein ZapA DM42_RS32285 PF01032 FecCD transport family DM42_RS32290 PF00005 ABC transporter DM42_RS32295 PF02277 Phosphoribosyltransferase DM42_RS32300 PF02654 Cobalamin-5-phosphate synthase DM42_RS32310 PF01497 Periplasmic binding protein DM42_RS32315 PF00155 Aminotransferase class I and II DM42_RS32320 PF17113 Regulatory signalling modulator protein AmpE DM42_RS32320 PF03186 CobD/Cbib protein DM42_RS32325 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase DM42_RS32330 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DM42_RS32330 PF07685 CobB/CobQ-like glutamine amidotransferase domain DM42_RS32335 PF07681 DoxX DM42_RS32345 PF02261 Aspartate decarboxylase DM42_RS32350 PF02569 Pantoate-beta-alanine ligase DM42_RS32355 PF02616 Segregation and condensation protein ScpA DM42_RS32370 PF04357 TamB, inner membrane protein subunit of TAM complex DM42_RS32375 PF01588 Putative tRNA binding domain DM42_RS32375 PF09334 tRNA synthetases class I (M) DM42_RS32380 PF05736 OprF membrane domain DM42_RS32380 PF00691 OmpA family DM42_RS32385 PF10609 NUBPL iron-transfer P-loop NTPase DM42_RS32395 PF00692 dUTPase DM42_RS32400 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain DM42_RS32400 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DM42_RS32400 PF01276 Orn/Lys/Arg decarboxylase, major domain DM42_RS32410 PF13419 Haloacid dehalogenase-like hydrolase DM42_RS32415 PF00206 Lyase DM42_RS32415 PF14698 Argininosuccinate lyase C-terminal DM42_RS32445 PF08241 Methyltransferase domain DM42_RS32450 PF00311 Phosphoenolpyruvate carboxylase DM42_RS32455 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DM42_RS32455 PF03900 Porphobilinogen deaminase, C-terminal domain DM42_RS32460 PF02602 Uroporphyrinogen-III synthase HemD DM42_RS32475 PF13333 Integrase core domain DM42_RS32475 PF00665 Integrase core domain DM42_RS32475 PF13276 HTH-like domain DM42_RS32480 PF12697 Alpha/beta hydrolase family DM42_RS32490 PF07690 Major Facilitator Superfamily DM42_RS32500 PF00171 Aldehyde dehydrogenase family DM42_RS32505 PF00719 Inorganic pyrophosphatase DM42_RS32510 PF01541 GIY-YIG catalytic domain DM42_RS32520 PF01915 Glycosyl hydrolase family 3 C-terminal domain DM42_RS32520 PF00933 Glycosyl hydrolase family 3 N terminal domain DM42_RS32520 PF14310 Fibronectin type III-like domain DM42_RS32530 PF02540 NAD synthase DM42_RS32530 PF00795 Carbon-nitrogen hydrolase DM42_RS32535 PF00543 Nitrogen regulatory protein P-II DM42_RS32540 PF13609 Gram-negative porin DM42_RS32545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS32545 PF03466 LysR substrate binding domain DM42_RS32555 PF00005 ABC transporter DM42_RS32560 PF00528 Binding-protein-dependent transport system inner membrane component DM42_RS32565 PF00528 Binding-protein-dependent transport system inner membrane component DM42_RS32570 PF00497 Bacterial extracellular solute-binding proteins, family 3 DM42_RS32575 PF02678 Pirin DM42_RS32575 PF17954 Quercetinase C-terminal cupin domain DM42_RS32585 PF00072 Response regulator receiver domain DM42_RS32585 PF00486 Transcriptional regulatory protein, C terminal DM42_RS32590 PF00672 HAMP domain DM42_RS32590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM42_RS32590 PF00512 His Kinase A (phospho-acceptor) domain DM42_RS32600 PF00528 Binding-protein-dependent transport system inner membrane component DM42_RS32605 PF00005 ABC transporter DM42_RS32620 PF00982 Glycosyltransferase family 20 DM42_RS32630 PF07690 Major Facilitator Superfamily DM42_RS32650 PF03974 Ecotin DM42_RS32655 PF00440 Bacterial regulatory proteins, tetR family DM42_RS32685 PF12838 4Fe-4S dicluster domain DM42_RS32700 PF00301 Rubredoxin DM42_RS32710 PF12848 ABC transporter DM42_RS32710 PF00005 ABC transporter DM42_RS32710 PF16326 ABC transporter C-terminal domain DM42_RS32715 PF00204 DNA gyrase B DM42_RS32715 PF00986 DNA gyrase B subunit, carboxyl terminus DM42_RS32715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM42_RS32715 PF01751 Toprim domain DM42_RS32720 PF00521 DNA gyrase/topoisomerase IV, subunit A DM42_RS32730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS32730 PF03466 LysR substrate binding domain DM42_RS32740 PF02417 Chromate transporter DM42_RS32745 PF08448 PAS fold DM42_RS32745 PF00990 Diguanylate cyclase, GGDEF domain DM42_RS32745 PF00563 EAL domain DM42_RS32745 PF08447 PAS fold DM42_RS32750 PF02567 Phenazine biosynthesis-like protein DM42_RS32760 PF00155 Aminotransferase class I and II DM42_RS32765 PF00892 EamA-like transporter family DM42_RS32775 PF00392 Bacterial regulatory proteins, gntR family DM42_RS32775 PF00155 Aminotransferase class I and II DM42_RS32780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM42_RS32780 PF00183 Hsp90 protein DM42_RS32785 PF04345 Chorismate lyase DM42_RS32805 PF13847 Methyltransferase domain DM42_RS32815 PF00474 Sodium:solute symporter family DM42_RS32825 PF00923 Transaldolase/Fructose-6-phosphate aldolase DM42_RS32830 PF03594 Benzoate membrane transport protein DM42_RS32840 PF01434 Peptidase family M41 DM42_RS32840 PF17862 AAA+ lid domain DM42_RS32840 PF00004 ATPase family associated with various cellular activities (AAA) DM42_RS32845 PF00034 Cytochrome c DM42_RS32850 PF00034 Cytochrome c DM42_RS32860 PF00892 EamA-like transporter family DM42_RS32865 PF00730 HhH-GPD superfamily base excision DNA repair protein DM42_RS32865 PF10576 Iron-sulfur binding domain of endonuclease III DM42_RS32865 PF00633 Helix-hairpin-helix motif DM42_RS32870 PF04060 Putative Fe-S cluster DM42_RS32875 PF17938 Tetracyclin repressor-like, C-terminal domain DM42_RS32875 PF00440 Bacterial regulatory proteins, tetR family DM42_RS32885 PF00723 Glycosyl hydrolases family 15 DM42_RS32890 PF10282 Lactonase, 7-bladed beta-propeller DM42_RS32895 PF17854 FtsK alpha domain DM42_RS32895 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DM42_RS32895 PF01580 FtsK/SpoIIIE family DM42_RS32895 PF09397 Ftsk gamma domain DM42_RS32905 PF01370 NAD dependent epimerase/dehydratase family DM42_RS32905 PF02222 ATP-grasp domain DM42_RS32915 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme DM42_RS32920 PF00270 DEAD/DEAH box helicase DM42_RS32920 PF00271 Helicase conserved C-terminal domain DM42_RS32925 PF00749 tRNA synthetases class I (E and Q), catalytic domain DM42_RS32930 PF17773 UPF0176 acylphosphatase like domain DM42_RS32935 PF14579 Helix-hairpin-helix motif DM42_RS32935 PF01336 OB-fold nucleic acid binding domain DM42_RS32935 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DM42_RS32935 PF07733 Bacterial DNA polymerase III alpha NTPase domain DM42_RS32935 PF02811 PHP domain DM42_RS32940 PF00005 ABC transporter DM42_RS32940 PF00664 ABC transporter transmembrane region DM42_RS32945 PF00534 Glycosyl transferases group 1 DM42_RS32945 PF13439 Glycosyltransferase Family 4 DM42_RS32965 PF00534 Glycosyl transferases group 1 DM42_RS32965 PF13439 Glycosyltransferase Family 4 DM42_RS32970 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DM42_RS32975 PF00535 Glycosyl transferase family 2 DM42_RS32990 PF07690 Major Facilitator Superfamily DM42_RS33005 PF04320 Protein with unknown function (DUF469) DM42_RS33010 PF10150 Ribonuclease E/G family DM42_RS33010 PF00575 S1 RNA binding domain DM42_RS33015 PF02545 Maf-like protein DM42_RS33020 PF02590 Predicted SPOUT methyltransferase DM42_RS33030 PF01467 Cytidylyltransferase-like DM42_RS33035 PF01218 Coproporphyrinogen III oxidase DM42_RS33040 PF02844 Phosphoribosylglycinamide synthetase, N domain DM42_RS33040 PF02843 Phosphoribosylglycinamide synthetase, C domain DM42_RS33040 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DM42_RS33045 PF01709 Transcriptional regulator DM42_RS33055 PF00106 short chain dehydrogenase DM42_RS33060 PF02142 MGS-like domain DM42_RS33065 PF08240 Alcohol dehydrogenase GroES-like domain DM42_RS33065 PF00107 Zinc-binding dehydrogenase DM42_RS33080 PF03814 Potassium-transporting ATPase A subunit DM42_RS33090 PF02669 K+-transporting ATPase, c chain DM42_RS33095 PF13493 Domain of unknown function (DUF4118) DM42_RS33095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM42_RS33095 PF13492 GAF domain DM42_RS33095 PF00512 His Kinase A (phospho-acceptor) domain DM42_RS33095 PF02702 Osmosensitive K+ channel His kinase sensor domain DM42_RS33100 PF00072 Response regulator receiver domain DM42_RS33100 PF00486 Transcriptional regulatory protein, C terminal DM42_RS33110 PF00893 Small Multidrug Resistance protein DM42_RS33130 PF02272 DHHA1 domain DM42_RS33130 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DM42_RS33130 PF01411 tRNA synthetases class II (A) DM42_RS33140 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase DM42_RS33150 PF03641 Possible lysine decarboxylase DM42_RS33155 PF08360 QacR-like protein, C-terminal region DM42_RS33155 PF00440 Bacterial regulatory proteins, tetR family DM42_RS33160 PF01219 Prokaryotic diacylglycerol kinase DM42_RS33165 PF13439 Glycosyltransferase Family 4 DM42_RS33165 PF00534 Glycosyl transferases group 1 DM42_RS33195 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DM42_RS33195 PF00205 Thiamine pyrophosphate enzyme, central domain DM42_RS33195 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DM42_RS33200 PF10369 Small subunit of acetolactate synthase DM42_RS33205 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DM42_RS33205 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DM42_RS33210 PF02666 Phosphatidylserine decarboxylase DM42_RS33215 PF01066 CDP-alcohol phosphatidyltransferase DM42_RS33220 PF00682 HMGL-like DM42_RS33220 PF08502 LeuA allosteric (dimerisation) domain DM42_RS33225 PF00916 Sulfate permease family DM42_RS33225 PF01740 STAS domain DM42_RS33230 PF00484 Carbonic anhydrase DM42_RS33240 PF13458 Periplasmic binding protein DM42_RS33245 PF00312 Ribosomal protein S15 DM42_RS33250 PF00575 S1 RNA binding domain DM42_RS33250 PF03725 3' exoribonuclease family, domain 2 DM42_RS33250 PF01138 3' exoribonuclease family, domain 1 DM42_RS33250 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DM42_RS33250 PF00013 KH domain DM42_RS33255 PF08240 Alcohol dehydrogenase GroES-like domain DM42_RS33255 PF08659 KR domain DM42_RS33255 PF00550 Phosphopantetheine attachment site DM42_RS33255 PF00698 Acyl transferase domain DM42_RS33255 PF14765 Polyketide synthase dehydratase DM42_RS33260 PF00121 Triosephosphate isomerase DM42_RS33265 PF03840 Preprotein translocase SecG subunit DM42_RS33275 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DM42_RS33280 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DM42_RS33285 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DM42_RS33290 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DM42_RS33300 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DM42_RS33300 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DM42_RS33300 PF10531 SLBB domain DM42_RS33305 PF00384 Molybdopterin oxidoreductase DM42_RS33305 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DM42_RS33305 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal DM42_RS33305 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal DM42_RS33305 PF00384 Molybdopterin oxidoreductase DM42_RS33305 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DM42_RS33310 PF00146 NADH dehydrogenase DM42_RS33315 PF12838 4Fe-4S dicluster domain DM42_RS33320 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DM42_RS33325 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DM42_RS33330 PF00361 Proton-conducting membrane transporter DM42_RS33330 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DM42_RS33335 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus DM42_RS33335 PF00361 Proton-conducting membrane transporter DM42_RS33340 PF00361 Proton-conducting membrane transporter DM42_RS33350 PF00293 NUDIX domain DM42_RS33360 PF02770 Acyl-CoA dehydrogenase, middle domain DM42_RS33360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DM42_RS33360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DM42_RS33365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DM42_RS33365 PF02770 Acyl-CoA dehydrogenase, middle domain DM42_RS33365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DM42_RS33375 PF01575 MaoC like domain DM42_RS33380 PF00043 Glutathione S-transferase, C-terminal domain DM42_RS33380 PF02798 Glutathione S-transferase, N-terminal domain DM42_RS33385 PF00378 Enoyl-CoA hydratase/isomerase DM42_RS33395 PF00155 Aminotransferase class I and II DM42_RS33405 PF03883 Peroxide stress protein YaaA DM42_RS33410 PF18027 Cytosolic carboxypeptidase N-terminal domain DM42_RS33410 PF00246 Zinc carboxypeptidase DM42_RS33425 PF00196 Bacterial regulatory proteins, luxR family DM42_RS33460 PF00376 MerR family regulatory protein DM42_RS33460 PF09278 MerR, DNA binding DM42_RS33470 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ DM42_RS33475 PF00248 Aldo/keto reductase family DM42_RS33485 PF00155 Aminotransferase class I and II DM42_RS33490 PF00271 Helicase conserved C-terminal domain DM42_RS33490 PF04851 Type III restriction enzyme, res subunit DM42_RS33490 PF02151 UvrB/uvrC motif DM42_RS33490 PF12344 Ultra-violet resistance protein B DM42_RS33490 PF17757 UvrB interaction domain DM42_RS33495 PF10634 Fe2+ transport protein DM42_RS33500 PF13473 Cupredoxin-like domain DM42_RS33505 PF03239 Iron permease FTR1 family DM42_RS33515 PF10636 Hemin uptake protein hemP DM42_RS33525 PF02678 Pirin DM42_RS33525 PF05726 Pirin C-terminal cupin domain DM42_RS33530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS33530 PF03466 LysR substrate binding domain DM42_RS33535 PF02472 Biopolymer transport protein ExbD/TolR DM42_RS33540 PF01618 MotA/TolQ/ExbB proton channel family DM42_RS33555 PF01177 Asp/Glu/Hydantoin racemase DM42_RS33560 PF00210 Ferritin-like domain DM42_RS33570 PF03350 Uncharacterized protein family, UPF0114 DM42_RS33590 PF00474 Sodium:solute symporter family DM42_RS33605 PF07715 TonB-dependent Receptor Plug Domain DM42_RS33605 PF00593 TonB dependent receptor DM42_RS33615 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) DM42_RS33615 PF13296 Putative type VI secretion system Rhs element Vgr DM42_RS33615 PF04717 Type VI secretion system, phage-baseplate injector DM42_RS33645 PF10138 vWA found in TerF C terminus DM42_RS33655 PF02342 TerD domain DM42_RS33675 PF12833 Helix-turn-helix domain DM42_RS33675 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DM42_RS33680 PF10282 Lactonase, 7-bladed beta-propeller DM42_RS33685 PF07690 Major Facilitator Superfamily DM42_RS33695 PF00009 Elongation factor Tu GTP binding domain DM42_RS33700 PF01507 Phosphoadenosine phosphosulfate reductase family DM42_RS33725 PF13577 SnoaL-like domain DM42_RS33735 PF03441 FAD binding domain of DNA photolyase DM42_RS33735 PF00875 DNA photolyase DM42_RS33750 PF03466 LysR substrate binding domain DM42_RS33750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS33765 PF00497 Bacterial extracellular solute-binding proteins, family 3 DM42_RS33770 PF00221 Aromatic amino acid lyase DM42_RS33775 PF07702 UTRA domain DM42_RS33775 PF00392 Bacterial regulatory proteins, gntR family DM42_RS33780 PF01175 Urocanase Rossmann-like domain DM42_RS33780 PF17392 Urocanase C-terminal domain DM42_RS33780 PF17391 Urocanase N-terminal domain DM42_RS33790 PF01979 Amidohydrolase family DM42_RS33805 PF07722 Peptidase C26 DM42_RS33810 PF00120 Glutamine synthetase, catalytic domain DM42_RS33815 PF00202 Aminotransferase class-III DM42_RS33825 PF03466 LysR substrate binding domain DM42_RS33825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS33830 PF02770 Acyl-CoA dehydrogenase, middle domain DM42_RS33830 PF18158 Adaptive response protein AidB N-terminal domain DM42_RS33830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DM42_RS33835 PF02515 CoA-transferase family III DM42_RS33840 PF07690 Major Facilitator Superfamily DM42_RS33840 PF00083 Sugar (and other) transporter DM42_RS33845 PF04362 Bacterial Fe(2+) trafficking DM42_RS33850 PF00583 Acetyltransferase (GNAT) family DM42_RS33850 PF00696 Amino acid kinase family DM42_RS33855 PF00270 DEAD/DEAH box helicase DM42_RS33855 PF00271 Helicase conserved C-terminal domain DM42_RS33855 PF11898 Domain of unknown function (DUF3418) DM42_RS33855 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DM42_RS33855 PF04408 Helicase associated domain (HA2) DM42_RS33875 PF00994 Probable molybdopterin binding domain DM42_RS33875 PF18146 Damage-inducible protein CinA KH domain DM42_RS33875 PF02464 Competence-damaged protein DM42_RS33885 PF00120 Glutamine synthetase, catalytic domain DM42_RS33885 PF03951 Glutamine synthetase, beta-Grasp domain DM42_RS33890 PF00989 PAS fold DM42_RS33890 PF00512 His Kinase A (phospho-acceptor) domain DM42_RS33890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM42_RS33895 PF00158 Sigma-54 interaction domain DM42_RS33895 PF00072 Response regulator receiver domain DM42_RS33895 PF02954 Bacterial regulatory protein, Fis family DM42_RS33900 PF00326 Prolyl oligopeptidase family DM42_RS33900 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DM42_RS33920 PF01177 Asp/Glu/Hydantoin racemase DM42_RS33925 PF11799 impB/mucB/samB family C-terminal domain DM42_RS33925 PF00817 impB/mucB/samB family DM42_RS33930 PF01432 Peptidase family M3 DM42_RS33935 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DM42_RS33935 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DM42_RS33940 PF00072 Response regulator receiver domain DM42_RS33940 PF00196 Bacterial regulatory proteins, luxR family DM42_RS33945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM42_RS33945 PF00512 His Kinase A (phospho-acceptor) domain DM42_RS33945 PF00989 PAS fold DM42_RS33950 PF00456 Transketolase, thiamine diphosphate binding domain DM42_RS33950 PF17831 Pyruvate dehydrogenase E1 component middle domain DM42_RS33955 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DM42_RS33955 PF02817 e3 binding domain DM42_RS33955 PF00364 Biotin-requiring enzyme DM42_RS33960 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DM42_RS33960 PF07992 Pyridine nucleotide-disulphide oxidoreductase DM42_RS33965 PF09361 Phasin protein DM42_RS33970 PF00768 D-alanyl-D-alanine carboxypeptidase DM42_RS33975 PF09339 IclR helix-turn-helix domain DM42_RS33975 PF01614 Bacterial transcriptional regulator DM42_RS33980 PF02754 Cysteine-rich domain DM42_RS33985 PF11870 Domain of unknown function (DUF3390) DM42_RS33985 PF13183 4Fe-4S dicluster domain DM42_RS33985 PF02589 LUD domain DM42_RS33995 PF01451 Low molecular weight phosphotyrosine protein phosphatase DM42_RS34000 PF02082 Transcriptional regulator DM42_RS34005 PF00266 Aminotransferase class-V DM42_RS34010 PF01592 NifU-like N terminal domain DM42_RS34015 PF01521 Iron-sulphur cluster biosynthesis DM42_RS34020 PF07743 HSCB C-terminal oligomerisation domain DM42_RS34025 PF00012 Hsp70 protein DM42_RS34030 PF00111 2Fe-2S iron-sulfur cluster binding domain DM42_RS34035 PF04384 Iron-sulphur cluster assembly DM42_RS34045 PF01336 OB-fold nucleic acid binding domain DM42_RS34045 PF00152 tRNA synthetases class II (D, K and N) DM42_RS34055 PF02272 DHHA1 domain DM42_RS34055 PF01368 DHH family DM42_RS34055 PF17768 RecJ OB domain DM42_RS34065 PF12704 MacB-like periplasmic core domain DM42_RS34065 PF02687 FtsX-like permease family DM42_RS34070 PF00005 ABC transporter DM42_RS34075 PF01026 TatD related DNase DM42_RS34080 PF03772 Competence protein DM42_RS34080 PF00753 Metallo-beta-lactamase superfamily DM42_RS34090 PF06418 CTP synthase N-terminus DM42_RS34090 PF00117 Glutamine amidotransferase class-I DM42_RS34095 PF00793 DAHP synthetase I family DM42_RS34100 PF00113 Enolase, C-terminal TIM barrel domain DM42_RS34100 PF03952 Enolase, N-terminal domain DM42_RS34105 PF04977 Septum formation initiator DM42_RS34115 PF01430 Hsp33 protein DM42_RS34120 PF00132 Bacterial transferase hexapeptide (six repeats) DM42_RS34125 PF04305 Protein of unknown function (DUF455) DM42_RS34130 PF00561 alpha/beta hydrolase fold DM42_RS34135 PF02811 PHP domain DM42_RS34140 PF01300 Telomere recombination DM42_RS34145 PF02163 Peptidase family M50 DM42_RS34150 PF00579 tRNA synthetases class I (W and Y) DM42_RS34160 PF00701 Dihydrodipicolinate synthetase family DM42_RS34165 PF06804 NlpB/DapX lipoprotein DM42_RS34170 PF00753 Metallo-beta-lactamase superfamily DM42_RS34175 PF08007 Cupin superfamily protein DM42_RS34180 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DM42_RS34190 PF01624 MutS domain I DM42_RS34190 PF00488 MutS domain V DM42_RS34190 PF05188 MutS domain II DM42_RS34190 PF05190 MutS family domain IV DM42_RS34190 PF05192 MutS domain III DM42_RS34205 PF00459 Inositol monophosphatase family DM42_RS34210 PF00588 SpoU rRNA Methylase family DM42_RS34215 PF00132 Bacterial transferase hexapeptide (six repeats) DM42_RS34220 PF00149 Calcineurin-like phosphoesterase DM42_RS34225 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DM42_RS34230 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DM42_RS34240 PF09190 DALR domain DM42_RS34240 PF01406 tRNA synthetases class I (C) catalytic domain DM42_RS34250 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DM42_RS34255 PF11734 TilS substrate C-terminal domain DM42_RS34255 PF09179 TilS substrate binding domain DM42_RS34255 PF01171 PP-loop family DM42_RS34260 PF00696 Amino acid kinase family DM42_RS34260 PF01842 ACT domain DM42_RS34260 PF13840 ACT domain DM42_RS34275 PF00361 Proton-conducting membrane transporter DM42_RS34275 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus DM42_RS34285 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DM42_RS34285 PF06481 COX Aromatic Rich Motif DM42_RS34290 PF00115 Cytochrome C and Quinol oxidase polypeptide I DM42_RS34295 PF00510 Cytochrome c oxidase subunit III DM42_RS34300 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DM42_RS34310 PF00486 Transcriptional regulatory protein, C terminal DM42_RS34310 PF00072 Response regulator receiver domain DM42_RS34315 PF00512 His Kinase A (phospho-acceptor) domain DM42_RS34315 PF08521 Two-component sensor kinase N-terminal DM42_RS34315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM42_RS34320 PF00486 Transcriptional regulatory protein, C terminal DM42_RS34320 PF00072 Response regulator receiver domain DM42_RS34330 PF02321 Outer membrane efflux protein DM42_RS34335 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DM42_RS34340 PF00873 AcrB/AcrD/AcrF family DM42_RS34350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DM42_RS34355 PF00528 Binding-protein-dependent transport system inner membrane component DM42_RS34360 PF12911 N-terminal TM domain of oligopeptide transport permease C DM42_RS34360 PF00528 Binding-protein-dependent transport system inner membrane component DM42_RS34365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DM42_RS34365 PF00005 ABC transporter DM42_RS34370 PF00877 NlpC/P60 family DM42_RS34375 PF01734 Patatin-like phospholipase DM42_RS34380 PF00749 tRNA synthetases class I (E and Q), catalytic domain DM42_RS34425 PF12833 Helix-turn-helix domain DM42_RS34425 PF02311 AraC-like ligand binding domain DM42_RS34430 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like DM42_RS34435 PF01274 Malate synthase DM42_RS34440 PF13419 Haloacid dehalogenase-like hydrolase DM42_RS34445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS34445 PF03466 LysR substrate binding domain DM42_RS34450 PF00582 Universal stress protein family DM42_RS34455 PF00463 Isocitrate lyase family DM42_RS34460 PF00270 DEAD/DEAH box helicase DM42_RS34460 PF00271 Helicase conserved C-terminal domain DM42_RS34470 PF00814 Glycoprotease family DM42_RS34480 PF03167 Uracil DNA glycosylase superfamily DM42_RS34490 PF08543 Phosphomethylpyrimidine kinase DM42_RS34495 PF07690 Major Facilitator Superfamily DM42_RS34500 PF01168 Alanine racemase, N-terminal domain DM42_RS34500 PF00842 Alanine racemase, C-terminal domain DM42_RS34505 PF18073 Rubredoxin metal binding domain DM42_RS34515 PF12848 ABC transporter DM42_RS34515 PF00005 ABC transporter DM42_RS34520 PF00255 Glutathione peroxidase DM42_RS34525 PF13091 PLD-like domain DM42_RS34530 PF05175 Methyltransferase small domain DM42_RS34535 PF01546 Peptidase family M20/M25/M40 DM42_RS34535 PF07687 Peptidase dimerisation domain DM42_RS34540 PF03960 ArsC family DM42_RS34545 PF00132 Bacterial transferase hexapeptide (six repeats) DM42_RS34545 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal DM42_RS34545 PF14602 Hexapeptide repeat of succinyl-transferase DM42_RS34550 PF00155 Aminotransferase class I and II DM42_RS34560 PF06470 SMC proteins Flexible Hinge Domain DM42_RS34560 PF02463 RecF/RecN/SMC N terminal domain DM42_RS34570 PF00533 BRCA1 C Terminus (BRCT) domain DM42_RS34570 PF01653 NAD-dependent DNA ligase adenylation domain DM42_RS34570 PF03120 NAD-dependent DNA ligase OB-fold domain DM42_RS34570 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DM42_RS34570 PF12826 Helix-hairpin-helix motif DM42_RS34575 PF01327 Polypeptide deformylase DM42_RS34580 PF01479 S4 domain DM42_RS34580 PF00849 RNA pseudouridylate synthase DM42_RS34585 PF01966 HD domain DM42_RS34585 PF08335 GlnD PII-uridylyltransferase DM42_RS34585 PF01909 Nucleotidyltransferase domain DM42_RS34590 PF00557 Metallopeptidase family M24 DM42_RS34595 PF00318 Ribosomal protein S2 DM42_RS34600 PF00889 Elongation factor TS DM42_RS34605 PF00696 Amino acid kinase family DM42_RS34610 PF01765 Ribosome recycling factor DM42_RS34615 PF01255 Putative undecaprenyl diphosphate synthase DM42_RS34625 PF13288 DXP reductoisomerase C-terminal domain DM42_RS34625 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DM42_RS34625 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DM42_RS34630 PF02163 Peptidase family M50 DM42_RS34630 PF17820 PDZ domain DM42_RS34635 PF01103 Surface antigen DM42_RS34635 PF07244 Surface antigen variable number repeat DM42_RS34645 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DM42_RS34645 PF00132 Bacterial transferase hexapeptide (six repeats) DM42_RS34650 PF07977 FabA-like domain DM42_RS34655 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DM42_RS34655 PF00132 Bacterial transferase hexapeptide (six repeats) DM42_RS34660 PF02684 Lipid-A-disaccharide synthetase DM42_RS34665 PF01351 Ribonuclease HII DM42_RS34670 PF00588 SpoU rRNA Methylase family DM42_RS34670 PF08032 RNA 2'-O ribose methyltransferase substrate binding DM42_RS34675 PF03618 Kinase/pyrophosphorylase DM42_RS34680 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DM42_RS34680 PF02896 PEP-utilising enzyme, TIM barrel domain DM42_RS34680 PF00391 PEP-utilising enzyme, mobile domain DM42_RS34690 PF01145 SPFH domain / Band 7 family DM42_RS34690 PF16200 C-terminal region of band_7 DM42_RS34695 PF01668 SmpB protein DM42_RS34705 PF03658 RnfH family Ubiquitin DM42_RS34710 PF00892 EamA-like transporter family DM42_RS34735 PF00478 IMP dehydrogenase / GMP reductase domain DM42_RS34735 PF00571 CBS domain DM42_RS34745 PF00117 Glutamine amidotransferase class-I DM42_RS34745 PF00958 GMP synthase C terminal domain DM42_RS34745 PF02540 NAD synthase DM42_RS34750 PF02811 PHP domain DM42_RS34750 PF00929 Exonuclease DM42_RS34750 PF14579 Helix-hairpin-helix motif DM42_RS34750 PF07733 Bacterial DNA polymerase III alpha NTPase domain DM42_RS34750 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DM42_RS34760 PF13673 Acetyltransferase (GNAT) domain DM42_RS34765 PF00293 NUDIX domain DM42_RS34765 PF13344 Haloacid dehalogenase-like hydrolase DM42_RS34770 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DM42_RS34770 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DM42_RS34785 PF00005 ABC transporter DM42_RS34790 PF00528 Binding-protein-dependent transport system inner membrane component DM42_RS34805 PF02910 Fumarate reductase flavoprotein C-term DM42_RS34805 PF00890 FAD binding domain DM42_RS34810 PF00392 Bacterial regulatory proteins, gntR family DM42_RS34810 PF07702 UTRA domain DM42_RS34820 PF09350 Domain of unknown function (DUF1992) DM42_RS34825 PF14437 MafB19-like deaminase DM42_RS34830 PF02016 LD-carboxypeptidase N-terminal domain DM42_RS34830 PF17676 LD-carboxypeptidase C-terminal domain DM42_RS34840 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DM42_RS34845 PF01177 Asp/Glu/Hydantoin racemase DM42_RS34855 PF01014 Uricase DM42_RS34855 PF09349 OHCU decarboxylase DM42_RS34860 PF03561 Allantoicase repeat DM42_RS34865 PF04115 Ureidoglycolate lyase DM42_RS34870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS34870 PF03466 LysR substrate binding domain DM42_RS34875 PF01042 Endoribonuclease L-PSP DM42_RS34885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS34885 PF03466 LysR substrate binding domain DM42_RS34900 PF00576 HIUase/Transthyretin family DM42_RS34905 PF01979 Amidohydrolase family DM42_RS34910 PF03466 LysR substrate binding domain DM42_RS34910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS34915 PF07311 Dodecin DM42_RS34920 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DM42_RS34920 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DM42_RS34930 PF01741 Large-conductance mechanosensitive channel, MscL DM42_RS34945 PF17092 Penicillin-binding protein OB-like domain DM42_RS34945 PF00905 Penicillin binding protein transpeptidase domain DM42_RS34945 PF00912 Transglycosylase DM42_RS34955 PF00291 Pyridoxal-phosphate dependent enzyme DM42_RS34960 PF07687 Peptidase dimerisation domain DM42_RS34960 PF01546 Peptidase family M20/M25/M40 DM42_RS34965 PF02559 CarD-like/TRCF domain DM42_RS34965 PF03461 TRCF domain DM42_RS34965 PF17757 UvrB interaction domain DM42_RS34965 PF00271 Helicase conserved C-terminal domain DM42_RS34965 PF00270 DEAD/DEAH box helicase DM42_RS34970 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DM42_RS34975 PF02542 YgbB family DM42_RS34980 PF02627 Carboxymuconolactone decarboxylase family DM42_RS34985 PF00578 AhpC/TSA family DM42_RS34990 PF00512 His Kinase A (phospho-acceptor) domain DM42_RS34990 PF00672 HAMP domain DM42_RS34990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DM42_RS34995 PF00486 Transcriptional regulatory protein, C terminal DM42_RS34995 PF00072 Response regulator receiver domain DM42_RS35035 PF00850 Histone deacetylase domain DM42_RS35060 PF08546 Ketopantoate reductase PanE/ApbA C terminal DM42_RS35060 PF02558 Ketopantoate reductase PanE/ApbA DM42_RS35070 PF02595 Glycerate kinase family DM42_RS35075 PF05698 Bacterial trigger factor protein (TF) C-terminus DM42_RS35075 PF05697 Bacterial trigger factor protein (TF) DM42_RS35075 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DM42_RS35080 PF00574 Clp protease DM42_RS35085 PF06689 ClpX C4-type zinc finger DM42_RS35085 PF10431 C-terminal, D2-small domain, of ClpB protein DM42_RS35085 PF07724 AAA domain (Cdc48 subfamily) DM42_RS35090 PF02190 ATP-dependent protease La (LON) substrate-binding domain DM42_RS35090 PF00004 ATPase family associated with various cellular activities (AAA) DM42_RS35090 PF05362 Lon protease (S16) C-terminal proteolytic domain DM42_RS35105 PF00639 PPIC-type PPIASE domain DM42_RS35110 PF13472 GDSL-like Lipase/Acylhydrolase family DM42_RS35115 PF00005 ABC transporter DM42_RS35120 PF00342 Phosphoglucose isomerase DM42_RS35125 PF01256 Carbohydrate kinase DM42_RS35130 PF01266 FAD dependent oxidoreductase DM42_RS35135 PF02769 AIR synthase related protein, C-terminal domain DM42_RS35135 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DM42_RS35135 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal DM42_RS35150 PF01722 BolA-like protein DM42_RS35155 PF04279 Intracellular septation protein A DM42_RS35160 PF01641 SelR domain DM42_RS35165 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DM42_RS35170 PF00501 AMP-binding enzyme DM42_RS35170 PF13193 AMP-binding enzyme C-terminal domain DM42_RS35175 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DM42_RS35175 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DM42_RS35175 PF00378 Enoyl-CoA hydratase/isomerase DM42_RS35180 PF00857 Isochorismatase family DM42_RS35185 PF00108 Thiolase, N-terminal domain DM42_RS35185 PF02803 Thiolase, C-terminal domain DM42_RS35190 PF00072 Response regulator receiver domain DM42_RS35190 PF00990 Diguanylate cyclase, GGDEF domain DM42_RS35220 PF07859 alpha/beta hydrolase fold DM42_RS35235 PF01571 Aminomethyltransferase folate-binding domain DM42_RS35240 PF02618 YceG-like family DM42_RS35245 PF02223 Thymidylate kinase DM42_RS35250 PF09115 DNA polymerase III, delta subunit, C terminal DM42_RS35255 PF01026 TatD related DNase DM42_RS35275 PF02463 RecF/RecN/SMC N terminal domain DM42_RS35280 PF13439 Glycosyltransferase Family 4 DM42_RS35300 PF00710 Asparaginase, N-terminal DM42_RS35300 PF17763 Glutaminase/Asparaginase C-terminal domain DM42_RS35305 PF04972 BON domain DM42_RS35305 PF01476 LysM domain DM42_RS35310 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DM42_RS35310 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DM42_RS35315 PF01261 Xylose isomerase-like TIM barrel DM42_RS35320 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DM42_RS35320 PF00205 Thiamine pyrophosphate enzyme, central domain DM42_RS35320 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DM42_RS35325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS35325 PF03466 LysR substrate binding domain DM42_RS35330 PF04542 Sigma-70 region 2 DM42_RS35330 PF08281 Sigma-70, region 4 DM42_RS35340 PF01250 Ribosomal protein S6 DM42_RS35350 PF01084 Ribosomal protein S18 DM42_RS35355 PF01281 Ribosomal protein L9, N-terminal domain DM42_RS35355 PF03948 Ribosomal protein L9, C-terminal domain DM42_RS35360 PF03796 DnaB-like helicase C terminal domain DM42_RS35360 PF00772 DnaB-like helicase N terminal domain DM42_RS35370 PF01384 Phosphate transporter family DM42_RS35375 PF00877 NlpC/P60 family DM42_RS35380 PF02562 PhoH-like protein DM42_RS35380 PF13638 PIN domain DM42_RS35385 PF00578 AhpC/TSA family DM42_RS35390 PF01522 Polysaccharide deacetylase DM42_RS35395 PF01370 NAD dependent epimerase/dehydratase family DM42_RS35395 PF02911 Formyl transferase, C-terminal domain DM42_RS35395 PF00551 Formyl transferase DM42_RS35400 PF01370 NAD dependent epimerase/dehydratase family DM42_RS35400 PF02911 Formyl transferase, C-terminal domain DM42_RS35400 PF00551 Formyl transferase DM42_RS35405 PF00535 Glycosyl transferase family 2 DM42_RS35410 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DM42_RS35420 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase DM42_RS35430 PF00155 Aminotransferase class I and II DM42_RS35435 PF00742 Homoserine dehydrogenase DM42_RS35435 PF01842 ACT domain DM42_RS35435 PF03447 Homoserine dehydrogenase, NAD binding domain DM42_RS35440 PF00291 Pyridoxal-phosphate dependent enzyme DM42_RS35440 PF14821 Threonine synthase N terminus DM42_RS35445 PF03454 MoeA C-terminal region (domain IV) DM42_RS35445 PF00994 Probable molybdopterin binding domain DM42_RS35445 PF03453 MoeA N-terminal region (domain I and II) DM42_RS35450 PF02597 ThiS family DM42_RS35455 PF02391 MoaE protein DM42_RS35460 PF01152 Bacterial-like globin DM42_RS35465 PF02082 Transcriptional regulator DM42_RS35470 PF00004 ATPase family associated with various cellular activities (AAA) DM42_RS35470 PF07724 AAA domain (Cdc48 subfamily) DM42_RS35470 PF17871 AAA lid domain DM42_RS35470 PF02861 Clp amino terminal domain, pathogenicity island component DM42_RS35470 PF10431 C-terminal, D2-small domain, of ClpB protein DM42_RS35490 PF02627 Carboxymuconolactone decarboxylase family DM42_RS35495 PF01590 GAF domain DM42_RS35495 PF02954 Bacterial regulatory protein, Fis family DM42_RS35495 PF00158 Sigma-54 interaction domain DM42_RS35500 PF01513 ATP-NAD kinase DM42_RS35510 PF00676 Dehydrogenase E1 component DM42_RS35515 PF02779 Transketolase, pyrimidine binding domain DM42_RS35515 PF02780 Transketolase, C-terminal domain DM42_RS35520 PF00364 Biotin-requiring enzyme DM42_RS35520 PF00561 alpha/beta hydrolase fold DM42_RS35525 PF04055 Radical SAM superfamily DM42_RS35525 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DM42_RS35530 PF01554 MatE DM42_RS35540 PF01197 Ribosomal protein L31 DM42_RS35545 PF06167 Glucose-regulated metallo-peptidase M90 DM42_RS35550 PF07690 Major Facilitator Superfamily DM42_RS35555 PF13411 MerR HTH family regulatory protein DM42_RS35560 PF07498 Rho termination factor, N-terminal domain DM42_RS35560 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DM42_RS35560 PF07497 Rho termination factor, RNA-binding domain DM42_RS35565 PF00085 Thioredoxin DM42_RS35570 PF12170 DNA polymerase III tau subunit V interacting with alpha DM42_RS35570 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding DM42_RS35570 PF12169 DNA polymerase III subunits gamma and tau domain III DM42_RS35575 PF02575 YbaB/EbfC DNA-binding family DM42_RS35580 PF02132 RecR protein DM42_RS35580 PF13662 Toprim domain DM42_RS35585 PF02515 CoA-transferase family III DM42_RS35590 PF01975 Survival protein SurE DM42_RS35600 PF01551 Peptidase family M23 DM42_RS35600 PF01476 LysM domain DM42_RS35605 PF04545 Sigma-70, region 4 DM42_RS35605 PF04539 Sigma-70 region 3 DM42_RS35605 PF04542 Sigma-70 region 2 DM42_RS35605 PF00140 Sigma-70 factor, region 1.2 DM42_RS35620 PF05958 tRNA (Uracil-5-)-methyltransferase DM42_RS35625 PF01027 Inhibitor of apoptosis-promoting Bax1 DM42_RS35630 PF00334 Nucleoside diphosphate kinase DM42_RS35635 PF04055 Radical SAM superfamily DM42_RS35645 PF04551 GcpE protein DM42_RS35650 PF03129 Anticodon binding domain DM42_RS35650 PF13393 Histidyl-tRNA synthetase DM42_RS35655 PF09976 Tetratricopeptide repeat-like domain DM42_RS35660 PF13360 PQQ-like domain DM42_RS35665 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DM42_RS35665 PF01926 50S ribosome-binding GTPase DM42_RS35670 PF17209 Hfq protein DM42_RS35675 PF16360 GTP-binding GTPase Middle Region DM42_RS35675 PF13167 GTP-binding GTPase N-terminal DM42_RS35675 PF01926 50S ribosome-binding GTPase DM42_RS35680 PF01145 SPFH domain / Band 7 family DM42_RS35680 PF12221 Bacterial membrane protein N terminal DM42_RS35685 PF01145 SPFH domain / Band 7 family DM42_RS35695 PF13393 Histidyl-tRNA synthetase DM42_RS35700 PF00709 Adenylosuccinate synthetase DM42_RS35705 PF00156 Phosphoribosyl transferase domain DM42_RS35710 PF02705 K+ potassium transporter DM42_RS35715 PF13276 HTH-like domain DM42_RS35715 PF00665 Integrase core domain DM42_RS35715 PF13333 Integrase core domain DM42_RS35725 PF17674 HHH domain DM42_RS35725 PF00575 S1 RNA binding domain DM42_RS35725 PF09371 Tex-like protein N-terminal domain DM42_RS35725 PF16921 Tex protein YqgF-like domain DM42_RS35740 PF04851 Type III restriction enzyme, res subunit DM42_RS35740 PF13307 Helicase C-terminal domain DM42_RS35745 PF13525 Outer membrane lipoprotein DM42_RS35750 PF01479 S4 domain DM42_RS35750 PF00849 RNA pseudouridylate synthase DM42_RS35755 PF02578 Multi-copper polyphenol oxidoreductase laccase DM42_RS35760 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus DM42_RS35765 PF02803 Thiolase, C-terminal domain DM42_RS35765 PF00108 Thiolase, N-terminal domain DM42_RS35770 PF00106 short chain dehydrogenase DM42_RS35775 PF05233 PHB accumulation regulatory domain DM42_RS35775 PF07879 PHB/PHA accumulation regulator DNA-binding domain DM42_RS35785 PF01872 RibD C-terminal domain DM42_RS35880 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system DM42_RS35885 PF01580 FtsK/SpoIIIE family DM42_RS35885 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DM42_RS35885 PF17854 FtsK alpha domain DM42_RS35885 PF09397 Ftsk gamma domain DM42_RS35920 PF00398 Ribosomal RNA adenine dimethylase DM42_RS35955 PF01555 DNA methylase DM42_RS36200 PF04055 Radical SAM superfamily DM42_RS36200 PF18693 TRAM domain DM42_RS36200 PF00919 Uncharacterized protein family UPF0004 DM42_RS36205 PF00294 pfkB family carbohydrate kinase DM42_RS36215 PF01053 Cys/Met metabolism PLP-dependent enzyme DM42_RS36225 PF03466 LysR substrate binding domain DM42_RS36225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS36230 PF00107 Zinc-binding dehydrogenase DM42_RS36230 PF08240 Alcohol dehydrogenase GroES-like domain DM42_RS36245 PF03649 Uncharacterised protein family (UPF0014) DM42_RS36250 PF00005 ABC transporter DM42_RS36255 PF05170 AsmA family DM42_RS36265 PF12848 ABC transporter DM42_RS36265 PF00005 ABC transporter DM42_RS36280 PF04055 Radical SAM superfamily DM42_RS36280 PF06463 Molybdenum Cofactor Synthesis C DM42_RS36290 PF06722 Protein of unknown function (DUF1205) DM42_RS36305 PF01522 Polysaccharide deacetylase DM42_RS36325 PF00171 Aldehyde dehydrogenase family DM42_RS36330 PF03060 Nitronate monooxygenase DM42_RS36335 PF03922 OmpW family DM42_RS36340 PF00577 Outer membrane usher protein DM42_RS36340 PF13954 PapC N-terminal domain DM42_RS36340 PF13953 PapC C-terminal domain DM42_RS36345 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DM42_RS36350 PF06551 Protein of unknown function (DUF1120) DM42_RS36360 PF13416 Bacterial extracellular solute-binding protein DM42_RS36365 PF00005 ABC transporter DM42_RS36365 PF08402 TOBE domain DM42_RS36370 PF00528 Binding-protein-dependent transport system inner membrane component DM42_RS36375 PF00528 Binding-protein-dependent transport system inner membrane component DM42_RS36380 PF01925 Sulfite exporter TauE/SafE DM42_RS36390 PF00753 Metallo-beta-lactamase superfamily DM42_RS36395 PF13185 GAF domain DM42_RS36395 PF02954 Bacterial regulatory protein, Fis family DM42_RS36395 PF00158 Sigma-54 interaction domain DM42_RS36405 PF13443 Cro/C1-type HTH DNA-binding domain DM42_RS36415 PF13411 MerR HTH family regulatory protein DM42_RS36415 PF07739 TipAS antibiotic-recognition domain DM42_RS36425 PF00873 AcrB/AcrD/AcrF family DM42_RS36430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DM42_RS36435 PF08361 MAATS-type transcriptional repressor, C-terminal region DM42_RS36435 PF00440 Bacterial regulatory proteins, tetR family DM42_RS36440 PF00654 Voltage gated chloride channel DM42_RS36445 PF03601 Conserved hypothetical protein 698 DM42_RS36450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS36450 PF03466 LysR substrate binding domain DM42_RS36460 PF00294 pfkB family carbohydrate kinase DM42_RS36465 PF07690 Major Facilitator Superfamily DM42_RS36470 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DM42_RS36470 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DM42_RS36475 PF00356 Bacterial regulatory proteins, lacI family DM42_RS36520 PF01544 CorA-like Mg2+ transporter protein DM42_RS36540 PF01618 MotA/TolQ/ExbB proton channel family DM42_RS36545 PF02472 Biopolymer transport protein ExbD/TolR DM42_RS36550 PF02472 Biopolymer transport protein ExbD/TolR DM42_RS36560 PF01381 Helix-turn-helix DM42_RS36560 PF08671 Anti-repressor SinI DM42_RS36565 PF00593 TonB dependent receptor DM42_RS36565 PF07715 TonB-dependent Receptor Plug Domain DM42_RS36570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DM42_RS36575 PF00528 Binding-protein-dependent transport system inner membrane component DM42_RS36580 PF00528 Binding-protein-dependent transport system inner membrane component DM42_RS36580 PF12911 N-terminal TM domain of oligopeptide transport permease C DM42_RS36585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DM42_RS36585 PF00005 ABC transporter DM42_RS36590 PF00873 AcrB/AcrD/AcrF family DM42_RS36595 PF00593 TonB dependent receptor DM42_RS36595 PF07715 TonB-dependent Receptor Plug Domain DM42_RS36600 PF12833 Helix-turn-helix domain DM42_RS36600 PF14525 AraC-binding-like domain DM42_RS36605 PF00111 2Fe-2S iron-sulfur cluster binding domain DM42_RS36610 PF00355 Rieske [2Fe-2S] domain DM42_RS36610 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DM42_RS36615 PF00866 Ring hydroxylating beta subunit DM42_RS36620 PF00857 Isochorismatase family DM42_RS36630 PF01738 Dienelactone hydrolase family DM42_RS36635 PF01070 FMN-dependent dehydrogenase DM42_RS36645 PF00083 Sugar (and other) transporter DM42_RS36650 PF02566 OsmC-like protein DM42_RS36675 PF01047 MarR family DM42_RS36685 PF03060 Nitronate monooxygenase DM42_RS36710 PF00083 Sugar (and other) transporter DM42_RS36715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DM42_RS36715 PF03466 LysR substrate binding domain DM42_RS36725 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DM42_RS36730 PF00682 HMGL-like DM42_RS36735 PF02515 CoA-transferase family III DM42_RS36750 PF00202 Aminotransferase class-III DM42_RS36755 PF13361 UvrD-like helicase C-terminal domain DM42_RS36755 PF12705 PD-(D/E)XK nuclease superfamily DM42_RS36755 PF00580 UvrD/REP helicase N-terminal domain DM42_RS36800 PF00005 ABC transporter DM42_RS36800 PF14524 Wzt C-terminal domain DM42_RS36805 PF00535 Glycosyl transferase family 2 DM42_RS36835 PF03462 PCRF domain DM42_RS36835 PF00472 RF-1 domain