DM42_RS00065 SM00421 helix_turn_helix, Lux Regulon DM42_RS00450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DM42_RS01120 SM00563 Phosphate acyltransferases DM42_RS01860 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DM42_RS02675 SM00345 helix_turn_helix gluconate operon transcriptional repressor DM42_RS03500 SM00342 helix_turn_helix, arabinose operon control protein DM42_RS04850 SM00829 Enoylreductase DM42_RS04870 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. DM42_RS05555 SM00382 ATPases associated with a variety of cellular activities DM42_RS06055 SM00363 S4 RNA-binding domain DM42_RS07145 SM00257 Lysin motif DM42_RS07745 SM00052 Putative diguanylate phosphodiesterase DM42_RS08540 SM00363 S4 RNA-binding domain DM42_RS08815 SM00316 Ribosomal protein S1-like RNA-binding domain DM42_RS08945 SM00028 Tetratricopeptide repeats DM42_RS10080 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. DM42_RS10085 SM00825 Beta-ketoacyl synthase DM42_RS10085 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. DM42_RS11570 SM01118 DM42_RS11570 DM42_RS11680 SM00937 DM42_RS11680 DM42_RS12165 SM00965 Secretin and TonB N terminus short domain DM42_RS13625 SM00347 helix_turn_helix multiple antibiotic resistance protein DM42_RS13695 SM00388 His Kinase A (phosphoacceptor) domain DM42_RS15450 SM00878 Biotin carboxylase C-terminal domain DM42_RS15530 SM01016 Arginyl tRNA synthetase N terminal dom DM42_RS15555 SM01018 B12 binding domain DM42_RS16035 SM00917 LeuA allosteric (dimerisation) domain DM42_RS16325 SM01119 DM42_RS16325 DM42_RS16495 SM00650 Ribosomal RNA adenine dimethylases DM42_RS17255 SM01086 C-terminal, D2-small domain, of ClpB protein DM42_RS19100 SM00852 Probable molybdopterin binding domain DM42_RS19135 SM00382 ATPases associated with a variety of cellular activities DM42_RS19320 SM00382 ATPases associated with a variety of cellular activities DM42_RS19350 SM00829 Enoylreductase DM42_RS19360 SM00421 helix_turn_helix, Lux Regulon DM42_RS19375 SM00347 helix_turn_helix multiple antibiotic resistance protein DM42_RS19425 SM00495 Chitin-binding domain type 3 DM42_RS19430 SM00346 helix_turn_helix isocitrate lyase regulation DM42_RS19460 SM00226 Low molecular weight phosphatase family DM42_RS19480 SM00382 ATPases associated with a variety of cellular activities DM42_RS19535 SM01006 Siderophore biosynthesis protein domain DM42_RS19555 SM01006 Siderophore biosynthesis protein domain DM42_RS19560 SM00823 Phosphopantetheine attachment site DM42_RS19565 SM00823 Phosphopantetheine attachment site DM42_RS19570 SM00382 ATPases associated with a variety of cellular activities DM42_RS19590 SM00382 ATPases associated with a variety of cellular activities DM42_RS19600 SM00923 MbtH-like protein DM42_RS19615 SM00387 Histidine kinase-like ATPases DM42_RS19615 SM00388 His Kinase A (phosphoacceptor) domain DM42_RS19620 SM00448 cheY-homologous receiver domain DM42_RS19620 SM00862 Transcriptional regulatory protein, C terminal DM42_RS19630 SM00650 Ribosomal RNA adenine dimethylases DM42_RS19695 SM00062 Bacterial periplasmic substrate-binding proteins DM42_RS19715 SM00763 PrkA AAA domain DM42_RS19720 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DM42_RS19720 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DM42_RS19730 SM00354 helix_turn _helix lactose operon repressor DM42_RS19740 SM00382 ATPases associated with a variety of cellular activities DM42_RS19755 SM00382 ATPases associated with a variety of cellular activities DM42_RS19795 SM00382 ATPases associated with a variety of cellular activities DM42_RS19815 SM00450 Rhodanese Homology Domain DM42_RS19860 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DM42_RS19860 SM00267 diguanylate cyclase DM42_RS19940 SM00382 ATPases associated with a variety of cellular activities DM42_RS20000 SM00062 Bacterial periplasmic substrate-binding proteins DM42_RS20000 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. DM42_RS20015 SM00345 helix_turn_helix gluconate operon transcriptional repressor DM42_RS20015 SM00895 DM42_RS20015 DM42_RS20025 SM00644 DM42_RS20025 DM42_RS20030 SM00967 RNA 2'-O ribose methyltransferase substrate binding DM42_RS20035 SM00316 Ribosomal protein S1-like RNA-binding domain DM42_RS20035 SM00357 Cold shock protein domain DM42_RS20035 SM00955 DM42_RS20035 DM42_RS20045 SM00062 Bacterial periplasmic substrate-binding proteins DM42_RS20060 SM00382 ATPases associated with a variety of cellular activities DM42_RS20130 SM00382 ATPases associated with a variety of cellular activities DM42_RS20145 SM00028 Tetratricopeptide repeats DM42_RS20175 SM00858 DM42_RS20175 DM42_RS20235 SM00861 Transketolase, pyrimidine binding domain DM42_RS20245 SM00347 helix_turn_helix multiple antibiotic resistance protein DM42_RS20290 SM00316 Ribosomal protein S1-like RNA-binding domain DM42_RS20290 SM00322 K homology RNA-binding domain DM42_RS20300 SM00363 S4 RNA-binding domain DM42_RS20380 SM00422 helix_turn_helix, mercury resistance DM42_RS20385 SM00411 bacterial (prokaryotic) histone like domain DM42_RS20390 SM00873 B3/4 domain DM42_RS20390 SM00874 tRNA synthetase B5 domain DM42_RS20390 SM00896 Ferredoxin-fold anticodon binding domain DM42_RS20415 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DM42_RS20425 SM00954 Region found in RelA / SpoT proteins DM42_RS20460 SM00882 Coenzyme A transferase DM42_RS20465 SM00882 Coenzyme A transferase DM42_RS20470 SM00091 PAS domain DM42_RS20470 SM00421 helix_turn_helix, Lux Regulon DM42_RS20480 SM00822 DM42_RS20480 DM42_RS20495 SM00563 Phosphate acyltransferases DM42_RS20500 SM00116 Domain in cystathionine beta-synthase and other proteins. DM42_RS20560 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DM42_RS20595 SM00387 Histidine kinase-like ATPases DM42_RS20595 SM01080 DM42_RS20595 DM42_RS20605 SM00448 cheY-homologous receiver domain DM42_RS20605 SM00862 Transcriptional regulatory protein, C terminal DM42_RS20660 SM00382 ATPases associated with a variety of cellular activities DM42_RS20695 SM00822 DM42_RS20695 DM42_RS20700 SM00382 ATPases associated with a variety of cellular activities DM42_RS20705 SM00382 ATPases associated with a variety of cellular activities DM42_RS20740 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DM42_RS20875 SM00028 Tetratricopeptide repeats DM42_RS20900 SM00195 Dual specificity phosphatase, catalytic domain DM42_RS20915 SM00563 Phosphate acyltransferases DM42_RS20930 SM00421 helix_turn_helix, Lux Regulon DM42_RS20960 SM00903 Flavin reductase like domain DM42_RS20980 SM00965 Secretin and TonB N terminus short domain DM42_RS21085 SM00448 cheY-homologous receiver domain DM42_RS21085 SM00862 Transcriptional regulatory protein, C terminal DM42_RS21090 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DM42_RS21090 SM00387 Histidine kinase-like ATPases DM42_RS21090 SM00388 His Kinase A (phosphoacceptor) domain DM42_RS21105 SM00382 ATPases associated with a variety of cellular activities DM42_RS21130 SM00886 Stress responsive A/B Barrel Domain DM42_RS21165 SM00829 Enoylreductase DM42_RS21175 SM01007 Class II Aldolase and Adducin N-terminal domain DM42_RS21180 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DM42_RS21190 SM00829 Enoylreductase DM42_RS21245 SM01012 DM42_RS21245 DM42_RS21325 SM00257 Lysin motif DM42_RS21355 SM00855 Phosphoglycerate mutase family DM42_RS21380 SM00091 PAS domain DM42_RS21380 SM00387 Histidine kinase-like ATPases DM42_RS21380 SM00388 His Kinase A (phosphoacceptor) domain DM42_RS21385 SM00448 cheY-homologous receiver domain DM42_RS21385 SM00862 Transcriptional regulatory protein, C terminal DM42_RS21395 SM00382 ATPases associated with a variety of cellular activities DM42_RS21425 SM00382 ATPases associated with a variety of cellular activities DM42_RS21435 SM01103 DM42_RS21435 DM42_RS21450 SM00851 MGS-like domain DM42_RS21450 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DM42_RS21460 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain DM42_RS21470 SM00257 Lysin motif DM42_RS21475 SM00849 Metallo-beta-lactamase superfamily DM42_RS21490 SM00479 DM42_RS21490 DM42_RS21530 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. DM42_RS21695 SM00861 Transketolase, pyrimidine binding domain DM42_RS21705 SM00903 Flavin reductase like domain DM42_RS21725 SM00829 Enoylreductase DM42_RS21735 SM00354 helix_turn _helix lactose operon repressor DM42_RS21755 SM00382 ATPases associated with a variety of cellular activities DM42_RS21780 SM00530 Helix-turn-helix XRE-family like proteins DM42_RS21825 SM00052 Putative diguanylate phosphodiesterase DM42_RS21870 SM00382 ATPases associated with a variety of cellular activities DM42_RS21875 SM00344 helix_turn_helix ASNC type DM42_RS21910 SM00346 helix_turn_helix isocitrate lyase regulation DM42_RS21930 SM00346 helix_turn_helix isocitrate lyase regulation DM42_RS21935 SM00342 helix_turn_helix, arabinose operon control protein DM42_RS21945 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DM42_RS21975 SM00052 Putative diguanylate phosphodiesterase DM42_RS21975 SM00267 diguanylate cyclase DM42_RS21985 SM00062 Bacterial periplasmic substrate-binding proteins DM42_RS22025 SM00342 helix_turn_helix, arabinose operon control protein DM42_RS22030 SM00382 ATPases associated with a variety of cellular activities DM42_RS22060 SM00729 Elongator protein 3, MiaB family, Radical SAM DM42_RS22095 SM00345 helix_turn_helix gluconate operon transcriptional repressor DM42_RS22095 SM00895 DM42_RS22095 DM42_RS22100 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DM42_RS22120 SM00382 ATPases associated with a variety of cellular activities DM42_RS22165 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DM42_RS22180 SM00530 Helix-turn-helix XRE-family like proteins DM42_RS22195 SM00267 diguanylate cyclase DM42_RS22265 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain DM42_RS22265 SM00437 Bacterial DNA topoisomerase I DNA-binding domain DM42_RS22265 SM00493 DM42_RS22265 DM42_RS22280 SM00422 helix_turn_helix, mercury resistance DM42_RS22330 SM00422 helix_turn_helix, mercury resistance DM42_RS22415 SM00487 DEAD-like helicases superfamily DM42_RS22585 SM00966 SpoVT / AbrB like domain DM42_RS22605 SM00382 ATPases associated with a variety of cellular activities DM42_RS22630 SM00829 Enoylreductase DM42_RS22660 SM00487 DEAD-like helicases superfamily DM42_RS22660 SM00490 helicase superfamily c-terminal domain DM42_RS22715 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DM42_RS22715 SM00465 GIY-YIG type nucleases (URI domain) DM42_RS22725 SM00841 Elongation factor P, C-terminal DM42_RS22725 SM01185 DM42_RS22725 DM42_RS22730 SM00382 ATPases associated with a variety of cellular activities DM42_RS22730 SM00448 cheY-homologous receiver domain DM42_RS22760 SM00358 Double-stranded RNA binding motif DM42_RS22760 SM00535 Ribonuclease III family DM42_RS22770 SM00838 Elongation factor G C-terminus DM42_RS22780 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DM42_RS22805 SM00825 Beta-ketoacyl synthase DM42_RS22815 SM00822 DM42_RS22815 DM42_RS22820 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. DM42_RS22870 SM00363 S4 RNA-binding domain DM42_RS22875 SM00316 Ribosomal protein S1-like RNA-binding domain DM42_RS22880 SM00729 Elongator protein 3, MiaB family, Radical SAM DM42_RS22890 SM00852 Probable molybdopterin binding domain DM42_RS22950 SM00342 helix_turn_helix, arabinose operon control protein DM42_RS22995 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DM42_RS23010 SM00382 ATPases associated with a variety of cellular activities DM42_RS23035 SM00852 Probable molybdopterin binding domain DM42_RS23040 SM00479 DM42_RS23040 DM42_RS23100 SM00729 Elongator protein 3, MiaB family, Radical SAM DM42_RS23105 SM00344 helix_turn_helix ASNC type DM42_RS23115 SM00893 Electron transfer flavoprotein domain DM42_RS23120 SM00893 Electron transfer flavoprotein domain DM42_RS23135 SM00382 ATPases associated with a variety of cellular activities DM42_RS23135 SM00930 DM42_RS23135 DM42_RS23160 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DM42_RS23175 SM00984 UDP binding domain DM42_RS23180 SM00028 Tetratricopeptide repeats DM42_RS23190 SM00411 bacterial (prokaryotic) histone like domain DM42_RS23195 SM00316 Ribosomal protein S1-like RNA-binding domain DM42_RS23215 SM00830 Chorismate mutase type II DM42_RS23230 SM00434 DNA Topoisomerase IV DM42_RS23260 SM00382 ATPases associated with a variety of cellular activities DM42_RS23280 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DM42_RS23285 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DM42_RS23285 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DM42_RS23300 SM00028 Tetratricopeptide repeats DM42_RS23325 SM00345 helix_turn_helix gluconate operon transcriptional repressor DM42_RS23325 SM00895 DM42_RS23325 DM42_RS23385 SM00421 helix_turn_helix, Lux Regulon DM42_RS23430 SM00830 Chorismate mutase type II DM42_RS23435 SM00479 DM42_RS23435 DM42_RS23440 SM00357 Cold shock protein domain DM42_RS23475 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DM42_RS23475 SM00954 Region found in RelA / SpoT proteins DM42_RS23480 SM01409 DM42_RS23480 DM42_RS23485 SM00072 Guanylate kinase homologues. DM42_RS23505 SM00729 Elongator protein 3, MiaB family, Radical SAM DM42_RS23620 SM00382 ATPases associated with a variety of cellular activities DM42_RS23630 SM00843 DM42_RS23630 DM42_RS23640 SM00463 Small MutS-related domain DM42_RS23650 SM00382 ATPases associated with a variety of cellular activities DM42_RS23790 SM00420 helix_turn_helix, Deoxyribose operon repressor DM42_RS23790 SM01134 DM42_RS23790 DM42_RS23820 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DM42_RS23865 SM00729 Elongator protein 3, MiaB family, Radical SAM DM42_RS23880 SM00450 Rhodanese Homology Domain DM42_RS23910 SM00382 ATPases associated with a variety of cellular activities DM42_RS23935 SM00988 UreE urease accessory protein, N-terminal domain DM42_RS24095 SM00563 Phosphate acyltransferases DM42_RS24115 SM00732 Likely ribonuclease with RNase H fold. DM42_RS24145 SM00883 Chaperonin 10 Kd subunit DM42_RS24195 SM00062 Bacterial periplasmic substrate-binding proteins DM42_RS24245 SM00749 bacterial OsmY and nodulation domain DM42_RS24275 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DM42_RS24280 SM01092 CO dehydrogenase flavoprotein C-terminal domain DM42_RS24295 SM00342 helix_turn_helix, arabinose operon control protein DM42_RS24365 SM00346 helix_turn_helix isocitrate lyase regulation DM42_RS24455 SM00530 Helix-turn-helix XRE-family like proteins DM42_RS24490 SM00342 helix_turn_helix, arabinose operon control protein DM42_RS24530 SM00822 DM42_RS24530 DM42_RS24530 SM00823 Phosphopantetheine attachment site DM42_RS24530 SM00825 Beta-ketoacyl synthase DM42_RS24530 SM00826 DM42_RS24530 DM42_RS24530 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. DM42_RS24530 SM00829 Enoylreductase DM42_RS24530 SM01294 DM42_RS24530 DM42_RS24545 SM00382 ATPases associated with a variety of cellular activities DM42_RS24555 SM00822 DM42_RS24555 DM42_RS24615 SM00382 ATPases associated with a variety of cellular activities DM42_RS24665 SM00853 MutL C terminal dimerisation domain DM42_RS24665 SM01340 DM42_RS24665 DM42_RS24730 SM00271 DnaJ molecular chaperone homology domain DM42_RS24750 SM00363 S4 RNA-binding domain DM42_RS24770 SM00382 ATPases associated with a variety of cellular activities DM42_RS24870 SM00487 DEAD-like helicases superfamily DM42_RS24870 SM00490 helicase superfamily c-terminal domain DM42_RS24885 SM01323 DM42_RS24885 DM42_RS24900 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DM42_RS24900 SM00245 tail specific protease DM42_RS24910 SM00867 YceI-like domain DM42_RS24915 SM00867 YceI-like domain DM42_RS24950 SM00981 DM42_RS24950 DM42_RS24960 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DM42_RS24995 SM01002 Alanine dehydrogenase/PNT, C-terminal domain DM42_RS24995 SM01003 Alanine dehydrogenase/PNT, N-terminal domain DM42_RS25020 SM01011 Aminopeptidase P, N-terminal domain DM42_RS25040 SM00798 AICARFT/IMPCHase bienzyme DM42_RS25040 SM00851 MGS-like domain DM42_RS25050 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DM42_RS25055 SM00382 ATPases associated with a variety of cellular activities DM42_RS25070 SM00855 Phosphoglycerate mutase family DM42_RS25080 SM00363 S4 RNA-binding domain DM42_RS25130 SM00869 Autotransporter beta-domain DM42_RS25135 SM00382 ATPases associated with a variety of cellular activities DM42_RS25150 SM00062 Bacterial periplasmic substrate-binding proteins DM42_RS25155 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DM42_RS25275 SM00345 helix_turn_helix gluconate operon transcriptional repressor DM42_RS25275 SM00895 DM42_RS25275 DM42_RS25290 SM00829 Enoylreductase DM42_RS25305 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DM42_RS25310 SM00861 Transketolase, pyrimidine binding domain DM42_RS25340 SM00919 Malic enzyme, NAD binding domain DM42_RS25340 SM01274 DM42_RS25340 DM42_RS25365 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family DM42_RS25385 SM00382 ATPases associated with a variety of cellular activities DM42_RS25395 SM00822 DM42_RS25395 DM42_RS25410 SM00346 helix_turn_helix isocitrate lyase regulation DM42_RS25435 SM00955 DM42_RS25435 DM42_RS25470 SM00878 Biotin carboxylase C-terminal domain DM42_RS25515 SM00644 DM42_RS25515 DM42_RS25530 SM00382 ATPases associated with a variety of cellular activities DM42_RS25530 SM00962 SRP54-type protein, GTPase domain DM42_RS25530 SM00963 SRP54-type protein, helical bundle domain DM42_RS25560 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase DM42_RS25590 SM01091 Transporter associated domain DM42_RS25595 SM00382 ATPases associated with a variety of cellular activities DM42_RS25630 SM00382 ATPases associated with a variety of cellular activities DM42_RS25640 SM00957 SecA DEAD-like domain DM42_RS25640 SM00958 SecA preprotein cross-linking domain DM42_RS25665 SM00864 Tubulin/FtsZ family, GTPase domain DM42_RS25665 SM00865 Tubulin/FtsZ family, C-terminal domain DM42_RS25670 SM00842 Cell division protein FtsA DM42_RS25755 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DM42_RS25815 SM00925 MltA specific insert domain DM42_RS25855 SM01118 DM42_RS25855 DM42_RS25860 SM00986 Uracil DNA glycosylase superfamily DM42_RS25860 SM00987 UreE urease accessory protein, C-terminal domain DM42_RS25870 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DM42_RS25890 SM00849 Metallo-beta-lactamase superfamily DM42_RS25920 SM00382 ATPases associated with a variety of cellular activities DM42_RS25945 SM00448 cheY-homologous receiver domain DM42_RS25945 SM00862 Transcriptional regulatory protein, C terminal DM42_RS25955 SM00937 DM42_RS25955 DM42_RS25985 SM00357 Cold shock protein domain DM42_RS26030 SM00769 Water Stress and Hypersensitive response DM42_RS26045 SM00829 Enoylreductase DM42_RS26085 SM00382 ATPases associated with a variety of cellular activities DM42_RS26085 SM01086 C-terminal, D2-small domain, of ClpB protein DM42_RS26150 SM00062 Bacterial periplasmic substrate-binding proteins DM42_RS26150 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. DM42_RS26195 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DM42_RS26290 SM00382 ATPases associated with a variety of cellular activities DM42_RS26320 SM00382 ATPases associated with a variety of cellular activities DM42_RS26345 SM00382 ATPases associated with a variety of cellular activities DM42_RS26385 SM01321 DM42_RS26385 DM42_RS26400 SM00382 ATPases associated with a variety of cellular activities DM42_RS26420 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DM42_RS26435 SM00965 Secretin and TonB N terminus short domain DM42_RS26460 SM01219 DM42_RS26460 DM42_RS26500 SM01004 Delta-aminolevulinic acid dehydratase DM42_RS26520 SM00662 RNA polymerases D DM42_RS26525 SM00363 S4 RNA-binding domain DM42_RS26525 SM01390 DM42_RS26525 DM42_RS26545 SM00316 Ribosomal protein S1-like RNA-binding domain DM42_RS26600 SM01374 DM42_RS26600 DM42_RS26620 SM00322 K homology RNA-binding domain DM42_RS26635 SM01382 DM42_RS26635 DM42_RS26635 SM01383 DM42_RS26635 DM42_RS26655 SM01403 DM42_RS26655 DM42_RS26665 SM00838 Elongation factor G C-terminus DM42_RS26665 SM00889 Elongation factor G, domain IV DM42_RS26680 SM00341 Helicase and RNase D C-terminal DM42_RS26680 SM00487 DEAD-like helicases superfamily DM42_RS26680 SM00490 helicase superfamily c-terminal domain DM42_RS26680 SM00956 DM42_RS26680 DM42_RS26685 SM00663 RNA polymerase I subunit A N-terminus DM42_RS26710 SM00649 Ribosomal protein L11/L12 DM42_RS26715 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. DM42_RS26715 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. DM42_RS26820 SM00344 helix_turn_helix ASNC type DM42_RS26840 SM00919 Malic enzyme, NAD binding domain DM42_RS26840 SM01274 DM42_RS26840 DM42_RS26860 SM00859 Semialdehyde dehydrogenase, NAD binding domain DM42_RS26915 SM00382 ATPases associated with a variety of cellular activities DM42_RS26955 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DM42_RS26970 SM00749 bacterial OsmY and nodulation domain DM42_RS27000 SM00849 Metallo-beta-lactamase superfamily DM42_RS27010 SM00344 helix_turn_helix ASNC type DM42_RS27020 SM00528 Domain in histone-like proteins of HNS family DM42_RS27065 SM00996 S-adenosyl-L-homocysteine hydrolase DM42_RS27065 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DM42_RS27080 SM00382 ATPases associated with a variety of cellular activities DM42_RS27080 SM00962 SRP54-type protein, GTPase domain DM42_RS27115 SM00448 cheY-homologous receiver domain DM42_RS27120 SM00448 cheY-homologous receiver domain DM42_RS27130 SM00138 Methyltransferase, chemotaxis proteins DM42_RS27135 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DM42_RS27135 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DM42_RS27140 SM00260 Two component signalling adaptor domain DM42_RS27145 SM00073 Histidine Phosphotransfer domain DM42_RS27145 SM00260 Two component signalling adaptor domain DM42_RS27145 SM00387 Histidine kinase-like ATPases DM42_RS27145 SM01231 DM42_RS27145 DM42_RS27150 SM00448 cheY-homologous receiver domain DM42_RS27180 SM00528 Domain in histone-like proteins of HNS family DM42_RS27235 SM00028 Tetratricopeptide repeats DM42_RS27265 SM00028 Tetratricopeptide repeats DM42_RS27465 SM00670 Large family of predicted nucleotide-binding domains DM42_RS27470 SM00966 SpoVT / AbrB like domain DM42_RS27490 SM00342 helix_turn_helix, arabinose operon control protein DM42_RS27540 SM00342 helix_turn_helix, arabinose operon control protein DM42_RS27540 SM00871 Bacterial transcription activator, effector binding domain DM42_RS27555 SM00422 helix_turn_helix, mercury resistance DM42_RS27570 SM00062 Bacterial periplasmic substrate-binding proteins DM42_RS27630 SM00487 DEAD-like helicases superfamily DM42_RS27630 SM00490 helicase superfamily c-terminal domain DM42_RS27640 SM00062 Bacterial periplasmic substrate-binding proteins DM42_RS27655 SM00382 ATPases associated with a variety of cellular activities DM42_RS27700 SM00470 ParB-like nuclease domain DM42_RS27715 SM01228 DM42_RS27715 DM42_RS27720 SM00382 ATPases associated with a variety of cellular activities DM42_RS27725 SM00382 ATPases associated with a variety of cellular activities DM42_RS27755 SM00382 ATPases associated with a variety of cellular activities DM42_RS27760 SM00382 ATPases associated with a variety of cellular activities DM42_RS27775 SM01118 DM42_RS27775 DM42_RS27780 SM00344 helix_turn_helix ASNC type DM42_RS27800 SM00448 cheY-homologous receiver domain DM42_RS27800 SM00862 Transcriptional regulatory protein, C terminal DM42_RS27805 SM00387 Histidine kinase-like ATPases DM42_RS27805 SM00388 His Kinase A (phosphoacceptor) domain DM42_RS27810 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain DM42_RS27825 SM00347 helix_turn_helix multiple antibiotic resistance protein DM42_RS27845 SM00411 bacterial (prokaryotic) histone like domain DM42_RS27850 SM00833 Cobalamin synthesis protein cobW C-terminal domain DM42_RS27865 SM00382 ATPases associated with a variety of cellular activities DM42_RS27930 SM00347 helix_turn_helix multiple antibiotic resistance protein DM42_RS28000 SM00382 ATPases associated with a variety of cellular activities DM42_RS28010 SM00387 Histidine kinase-like ATPases DM42_RS28010 SM00388 His Kinase A (phosphoacceptor) domain DM42_RS28015 SM00448 cheY-homologous receiver domain DM42_RS28015 SM00862 Transcriptional regulatory protein, C terminal DM42_RS28100 SM01060 DM42_RS28100 DM42_RS28150 SM00382 ATPases associated with a variety of cellular activities DM42_RS28160 SM00382 ATPases associated with a variety of cellular activities DM42_RS28180 SM00387 Histidine kinase-like ATPases DM42_RS28180 SM00433 TopoisomeraseII DM42_RS28185 SM00480 DNA polymerase III beta subunit DM42_RS28190 SM00382 ATPases associated with a variety of cellular activities DM42_RS28190 SM00760 Bacterial dnaA protein helix-turn-helix domain DM42_RS28205 SM01234 DM42_RS28205 DM42_RS28235 SM00267 diguanylate cyclase DM42_RS28260 SM01322 DM42_RS28260 DM42_RS28270 SM00342 helix_turn_helix, arabinose operon control protein DM42_RS28275 SM00478 endonuclease III DM42_RS28275 SM01009 AlkA N-terminal domain DM42_RS28305 SM00345 helix_turn_helix gluconate operon transcriptional repressor DM42_RS28305 SM00895 DM42_RS28305 DM42_RS28325 SM00382 ATPases associated with a variety of cellular activities DM42_RS28345 SM00062 Bacterial periplasmic substrate-binding proteins DM42_RS28345 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. DM42_RS28355 SM00382 ATPases associated with a variety of cellular activities DM42_RS28440 SM00530 Helix-turn-helix XRE-family like proteins DM42_RS28610 SM00990 DM42_RS28610 DM42_RS28640 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain DM42_RS28640 SM00437 Bacterial DNA topoisomerase I DNA-binding domain DM42_RS28640 SM00493 DM42_RS28640 DM42_RS28685 SM00091 PAS domain DM42_RS28685 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DM42_RS28685 SM00387 Histidine kinase-like ATPases DM42_RS28685 SM00388 His Kinase A (phosphoacceptor) domain DM42_RS28690 SM00448 cheY-homologous receiver domain DM42_RS28720 SM00671 Sel1-like repeats. DM42_RS28760 SM00845 GatB domain DM42_RS28775 SM00829 Enoylreductase DM42_RS28780 SM00342 helix_turn_helix, arabinose operon control protein DM42_RS28825 SM00387 Histidine kinase-like ATPases DM42_RS28825 SM00388 His Kinase A (phosphoacceptor) domain DM42_RS28830 SM00448 cheY-homologous receiver domain DM42_RS28835 SM00382 ATPases associated with a variety of cellular activities DM42_RS28835 SM01086 C-terminal, D2-small domain, of ClpB protein DM42_RS28850 SM00833 Cobalamin synthesis protein cobW C-terminal domain DM42_RS28855 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase DM42_RS28945 SM00382 ATPases associated with a variety of cellular activities DM42_RS29005 SM00421 helix_turn_helix, Lux Regulon DM42_RS29005 SM00448 cheY-homologous receiver domain DM42_RS29010 SM00387 Histidine kinase-like ATPases DM42_RS29035 SM00382 ATPases associated with a variety of cellular activities DM42_RS29070 SM00382 ATPases associated with a variety of cellular activities DM42_RS29075 SM00382 ATPases associated with a variety of cellular activities DM42_RS29090 SM00797 Allophanate hydrolase subunit 2 DM42_RS29095 SM00796 Allophanate hydrolase subunit 1 DM42_RS29130 SM00530 Helix-turn-helix XRE-family like proteins DM42_RS29150 SM00858 DM42_RS29150 DM42_RS29195 SM00047 Lysozyme subfamily 2 DM42_RS29300 SM00382 ATPases associated with a variety of cellular activities DM42_RS29315 SM01230 DM42_RS29315 DM42_RS29325 SM00530 Helix-turn-helix XRE-family like proteins DM42_RS29385 SM00905 Dihydroneopterin aldolase DM42_RS29420 SM00354 helix_turn _helix lactose operon repressor DM42_RS29425 SM00052 Putative diguanylate phosphodiesterase DM42_RS29425 SM00267 diguanylate cyclase DM42_RS29480 SM00382 ATPases associated with a variety of cellular activities DM42_RS29530 SM00893 Electron transfer flavoprotein domain DM42_RS29535 SM00893 Electron transfer flavoprotein domain DM42_RS29565 SM00849 Metallo-beta-lactamase superfamily DM42_RS29570 SM00342 helix_turn_helix, arabinose operon control protein DM42_RS29655 SM00530 Helix-turn-helix XRE-family like proteins DM42_RS29680 SM00470 ParB-like nuclease domain DM42_RS29720 SM00344 helix_turn_helix ASNC type DM42_RS29765 SM01092 CO dehydrogenase flavoprotein C-terminal domain DM42_RS29770 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DM42_RS29805 SM01130 DM42_RS29805 DM42_RS29840 SM00052 Putative diguanylate phosphodiesterase DM42_RS29870 SM00797 Allophanate hydrolase subunit 2 DM42_RS29875 SM00796 Allophanate hydrolase subunit 1 DM42_RS29880 SM00878 Biotin carboxylase C-terminal domain DM42_RS29900 SM00729 Elongator protein 3, MiaB family, Radical SAM DM42_RS29900 SM00876 Biotin and Thiamin Synthesis associated domain DM42_RS29935 SM00947 Carbonic anhydrase DM42_RS29945 SM00849 Metallo-beta-lactamase superfamily DM42_RS29950 SM00382 ATPases associated with a variety of cellular activities DM42_RS29975 SM00836 DALR anticodon binding domain DM42_RS29975 SM01016 Arginyl tRNA synthetase N terminal dom DM42_RS29990 SM01018 B12 binding domain DM42_RS30010 SM00346 helix_turn_helix isocitrate lyase regulation DM42_RS30060 SM00671 Sel1-like repeats. DM42_RS30075 SM00382 ATPases associated with a variety of cellular activities DM42_RS30105 SM00936 Penicillin-binding protein 5, C-terminal domain DM42_RS30135 SM00729 Elongator protein 3, MiaB family, Radical SAM DM42_RS30140 SM00062 Bacterial periplasmic substrate-binding proteins DM42_RS30145 SM00382 ATPases associated with a variety of cellular activities DM42_RS30200 SM00387 Histidine kinase-like ATPases DM42_RS30200 SM00388 His Kinase A (phosphoacceptor) domain DM42_RS30205 SM00382 ATPases associated with a variety of cellular activities DM42_RS30205 SM00448 cheY-homologous receiver domain DM42_RS30220 SM00382 ATPases associated with a variety of cellular activities DM42_RS30230 SM00938 Nitrogen regulatory protein P-II DM42_RS30270 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DM42_RS30270 SM00245 tail specific protease DM42_RS30275 SM00855 Phosphoglycerate mutase family DM42_RS30280 SM00450 Rhodanese Homology Domain DM42_RS30300 SM00506 Appr-1"-p processing enzyme DM42_RS30390 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DM42_RS30390 SM01049 DM42_RS30390 DM42_RS30415 SM00382 ATPases associated with a variety of cellular activities DM42_RS30430 SM00481 DNA polymerase alpha chain like domain DM42_RS30435 SM00345 helix_turn_helix gluconate operon transcriptional repressor DM42_RS30435 SM00866 DM42_RS30435 DM42_RS30460 SM01081 Putative carbohydrate binding domain DM42_RS30500 SM00917 LeuA allosteric (dimerisation) domain DM42_RS30515 SM00382 ATPases associated with a variety of cellular activities DM42_RS30515 SM00962 SRP54-type protein, GTPase domain DM42_RS30515 SM00963 SRP54-type protein, helical bundle domain DM42_RS30550 SM01400 DM42_RS30550 DM42_RS30570 SM00028 Tetratricopeptide repeats DM42_RS30575 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain DM42_RS30575 SM01232 DM42_RS30575 DM42_RS30580 SM00478 endonuclease III DM42_RS30585 SM00464 Found in ATP-dependent protease La (LON) DM42_RS30615 SM00382 ATPases associated with a variety of cellular activities DM42_RS30635 SM00116 Domain in cystathionine beta-synthase and other proteins. DM42_RS30685 SM00986 Uracil DNA glycosylase superfamily DM42_RS30685 SM00987 UreE urease accessory protein, C-terminal domain DM42_RS30710 SM00822 DM42_RS30710 DM42_RS30735 SM00825 Beta-ketoacyl synthase DM42_RS30775 SM00822 DM42_RS30775 DM42_RS30815 SM00345 helix_turn_helix gluconate operon transcriptional repressor DM42_RS30815 SM00895 DM42_RS30815 DM42_RS30820 SM00155 Phospholipase D. Active site motifs. DM42_RS30825 SM01007 Class II Aldolase and Adducin N-terminal domain DM42_RS30835 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. DM42_RS30855 SM00347 helix_turn_helix multiple antibiotic resistance protein DM42_RS30865 SM01119 DM42_RS30865 DM42_RS30915 SM00978 DM42_RS30915 DM42_RS30935 SM00834 Putative regulatory protein DM42_RS30955 SM00155 Phospholipase D. Active site motifs. DM42_RS31000 SM00382 ATPases associated with a variety of cellular activities DM42_RS31030 SM00650 Ribosomal RNA adenine dimethylases DM42_RS31050 SM00563 Phosphate acyltransferases DM42_RS31060 SM00836 DALR anticodon binding domain DM42_RS31070 SM00028 Tetratricopeptide repeats DM42_RS31080 SM01091 Transporter associated domain DM42_RS31100 SM00729 Elongator protein 3, MiaB family, Radical SAM DM42_RS31115 SM00530 Helix-turn-helix XRE-family like proteins DM42_RS31145 SM00354 helix_turn _helix lactose operon repressor DM42_RS31190 SM00420 helix_turn_helix, Deoxyribose operon repressor DM42_RS31190 SM01134 DM42_RS31190 DM42_RS31210 SM00487 DEAD-like helicases superfamily DM42_RS31210 SM00490 helicase superfamily c-terminal domain DM42_RS31230 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DM42_RS31235 SM00345 helix_turn_helix gluconate operon transcriptional repressor DM42_RS31235 SM00895 DM42_RS31235 DM42_RS31275 SM00342 helix_turn_helix, arabinose operon control protein DM42_RS31295 SM00387 Histidine kinase-like ATPases DM42_RS31295 SM00388 His Kinase A (phosphoacceptor) domain DM42_RS31300 SM00448 cheY-homologous receiver domain DM42_RS31300 SM00862 Transcriptional regulatory protein, C terminal DM42_RS31305 SM00382 ATPases associated with a variety of cellular activities DM42_RS31325 SM00881 CoA binding domain DM42_RS31430 SM01001 AIR carboxylase DM42_RS31460 SM00448 cheY-homologous receiver domain DM42_RS31460 SM00862 Transcriptional regulatory protein, C terminal DM42_RS31465 SM00387 Histidine kinase-like ATPases DM42_RS31465 SM00388 His Kinase A (phosphoacceptor) domain DM42_RS31470 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DM42_RS31490 SM00342 helix_turn_helix, arabinose operon control protein DM42_RS31530 SM00829 Enoylreductase DM42_RS31545 SM00382 ATPases associated with a variety of cellular activities DM42_RS31560 SM00822 DM42_RS31560 DM42_RS31595 SM00382 ATPases associated with a variety of cellular activities DM42_RS31670 SM00344 helix_turn_helix ASNC type DM42_RS31675 SM00903 Flavin reductase like domain DM42_RS31740 SM00646 DM42_RS31740 DM42_RS31775 SM01207 DM42_RS31775 DM42_RS31850 SM00100 Cyclic nucleotide-monophosphate binding domain DM42_RS31850 SM00419 helix_turn_helix, cAMP Regulatory protein DM42_RS31870 SM00052 Putative diguanylate phosphodiesterase DM42_RS31895 SM00345 helix_turn_helix gluconate operon transcriptional repressor DM42_RS31895 SM00866 DM42_RS31895 DM42_RS31915 SM00838 Elongation factor G C-terminus DM42_RS31915 SM00889 Elongation factor G, domain IV DM42_RS31935 SM01329 DM42_RS31935 DM42_RS31955 SM00357 Cold shock protein domain DM42_RS31965 SM00382 ATPases associated with a variety of cellular activities DM42_RS31965 SM01086 C-terminal, D2-small domain, of ClpB protein DM42_RS32000 SM00904 Riboflavin kinase DM42_RS32080 SM00382 ATPases associated with a variety of cellular activities DM42_RS32085 SM00382 ATPases associated with a variety of cellular activities DM42_RS32135 SM00822 DM42_RS32135 DM42_RS32155 SM00822 DM42_RS32155 DM42_RS32160 SM00822 DM42_RS32160 DM42_RS32290 SM00382 ATPases associated with a variety of cellular activities DM42_RS32305 SM00855 Phosphoglycerate mutase family DM42_RS32430 SM00972 Spore Coat Protein U domain DM42_RS32435 SM00972 Spore Coat Protein U domain DM42_RS32440 SM00530 Helix-turn-helix XRE-family like proteins DM42_RS32465 SM00028 Tetratricopeptide repeats DM42_RS32515 SM00342 helix_turn_helix, arabinose operon control protein DM42_RS32520 SM01217 DM42_RS32520 DM42_RS32535 SM00938 Nitrogen regulatory protein P-II DM42_RS32555 SM00382 ATPases associated with a variety of cellular activities DM42_RS32570 SM00062 Bacterial periplasmic substrate-binding proteins DM42_RS32585 SM00448 cheY-homologous receiver domain DM42_RS32585 SM00862 Transcriptional regulatory protein, C terminal DM42_RS32590 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DM42_RS32590 SM00387 Histidine kinase-like ATPases DM42_RS32590 SM00388 His Kinase A (phosphoacceptor) domain DM42_RS32605 SM00382 ATPases associated with a variety of cellular activities DM42_RS32660 SM00822 DM42_RS32660 DM42_RS32710 SM00382 ATPases associated with a variety of cellular activities DM42_RS32715 SM00387 Histidine kinase-like ATPases DM42_RS32715 SM00433 TopoisomeraseII DM42_RS32720 SM00434 DNA Topoisomerase IV DM42_RS32745 SM00052 Putative diguanylate phosphodiesterase DM42_RS32745 SM00267 diguanylate cyclase DM42_RS32775 SM00345 helix_turn_helix gluconate operon transcriptional repressor DM42_RS32780 SM00387 Histidine kinase-like ATPases DM42_RS32790 SM00986 Uracil DNA glycosylase superfamily DM42_RS32790 SM00987 UreE urease accessory protein, C-terminal domain DM42_RS32840 SM00382 ATPases associated with a variety of cellular activities DM42_RS32865 SM00478 endonuclease III DM42_RS32895 SM00382 ATPases associated with a variety of cellular activities DM42_RS32895 SM00843 DM42_RS32895 DM42_RS32920 SM00487 DEAD-like helicases superfamily DM42_RS32920 SM00490 helicase superfamily c-terminal domain DM42_RS32930 SM00450 Rhodanese Homology Domain DM42_RS32935 SM00481 DNA polymerase alpha chain like domain DM42_RS32940 SM00382 ATPases associated with a variety of cellular activities DM42_RS33010 SM00316 Ribosomal protein S1-like RNA-binding domain DM42_RS33040 SM01209 DM42_RS33040 DM42_RS33040 SM01210 DM42_RS33040 DM42_RS33060 SM00851 MGS-like domain DM42_RS33065 SM00829 Enoylreductase DM42_RS33095 SM00387 Histidine kinase-like ATPases DM42_RS33095 SM00388 His Kinase A (phosphoacceptor) domain DM42_RS33100 SM00448 cheY-homologous receiver domain DM42_RS33100 SM00862 Transcriptional regulatory protein, C terminal DM42_RS33130 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DM42_RS33220 SM00917 LeuA allosteric (dimerisation) domain DM42_RS33230 SM00947 Carbonic anhydrase DM42_RS33245 SM01387 DM42_RS33245 DM42_RS33250 SM00316 Ribosomal protein S1-like RNA-binding domain DM42_RS33250 SM00322 K homology RNA-binding domain DM42_RS33255 SM00829 Enoylreductase DM42_RS33300 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DM42_RS33305 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DM42_RS33400 SM00670 Large family of predicted nucleotide-binding domains DM42_RS33410 SM00631 DM42_RS33410 DM42_RS33425 SM00421 helix_turn_helix, Lux Regulon DM42_RS33460 SM00422 helix_turn_helix, mercury resistance DM42_RS33490 SM00487 DEAD-like helicases superfamily DM42_RS33490 SM00490 helicase superfamily c-terminal domain DM42_RS33675 SM00342 helix_turn_helix, arabinose operon control protein DM42_RS33690 SM00421 helix_turn_helix, Lux Regulon DM42_RS33765 SM00062 Bacterial periplasmic substrate-binding proteins DM42_RS33775 SM00345 helix_turn_helix gluconate operon transcriptional repressor DM42_RS33775 SM00866 DM42_RS33775 DM42_RS33810 SM01230 DM42_RS33810 DM42_RS33855 SM00382 ATPases associated with a variety of cellular activities DM42_RS33855 SM00487 DEAD-like helicases superfamily DM42_RS33855 SM00490 helicase superfamily c-terminal domain DM42_RS33855 SM00847 Helicase associated domain (HA2) Add an annotation DM42_RS33875 SM00852 Probable molybdopterin binding domain DM42_RS33880 SM00450 Rhodanese Homology Domain DM42_RS33885 SM01230 DM42_RS33885 DM42_RS33890 SM00387 Histidine kinase-like ATPases DM42_RS33890 SM00388 His Kinase A (phosphoacceptor) domain DM42_RS33895 SM00382 ATPases associated with a variety of cellular activities DM42_RS33895 SM00448 cheY-homologous receiver domain DM42_RS33940 SM00421 helix_turn_helix, Lux Regulon DM42_RS33940 SM00448 cheY-homologous receiver domain DM42_RS33945 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DM42_RS33945 SM00091 PAS domain DM42_RS33945 SM00387 Histidine kinase-like ATPases DM42_RS33945 SM00388 His Kinase A (phosphoacceptor) domain DM42_RS33975 SM00346 helix_turn_helix isocitrate lyase regulation DM42_RS33995 SM00226 Low molecular weight phosphatase family DM42_RS34020 SM00271 DnaJ molecular chaperone homology domain DM42_RS34070 SM00382 ATPases associated with a variety of cellular activities DM42_RS34080 SM00849 Metallo-beta-lactamase superfamily DM42_RS34100 SM01192 DM42_RS34100 DM42_RS34100 SM01193 DM42_RS34100 DM42_RS34135 SM00481 DNA polymerase alpha chain like domain DM42_RS34160 SM01130 DM42_RS34160 DM42_RS34170 SM00849 Metallo-beta-lactamase superfamily DM42_RS34175 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. DM42_RS34190 SM00533 DNA-binding domain of DNA mismatch repair MUTS family DM42_RS34190 SM00534 ATPase domain of DNA mismatch repair MUTS family DM42_RS34235 SM00028 Tetratricopeptide repeats DM42_RS34240 SM00840 DM42_RS34240 DM42_RS34245 SM00478 endonuclease III DM42_RS34255 SM00977 TilS substrate C-terminal domain DM42_RS34310 SM00448 cheY-homologous receiver domain DM42_RS34310 SM00862 Transcriptional regulatory protein, C terminal DM42_RS34315 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DM42_RS34315 SM00387 Histidine kinase-like ATPases DM42_RS34315 SM00388 His Kinase A (phosphoacceptor) domain DM42_RS34320 SM00862 Transcriptional regulatory protein, C terminal DM42_RS34365 SM00382 ATPases associated with a variety of cellular activities DM42_RS34425 SM00342 helix_turn_helix, arabinose operon control protein DM42_RS34460 SM00487 DEAD-like helicases superfamily DM42_RS34460 SM00490 helicase superfamily c-terminal domain DM42_RS34480 SM00986 Uracil DNA glycosylase superfamily DM42_RS34480 SM00987 UreE urease accessory protein, C-terminal domain DM42_RS34500 SM01005 Alanine racemase, C-terminal domain DM42_RS34505 SM00382 ATPases associated with a variety of cellular activities DM42_RS34515 SM00382 ATPases associated with a variety of cellular activities DM42_RS34525 SM00155 Phospholipase D. Active site motifs. DM42_RS34560 SM00968 SMC proteins Flexible Hinge Domain DM42_RS34565 SM00771 ZipA, C-terminal domain (FtsZ-binding) DM42_RS34570 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DM42_RS34570 SM00292 breast cancer carboxy-terminal domain DM42_RS34570 SM00532 Ligase N family DM42_RS34580 SM00363 S4 RNA-binding domain DM42_RS34585 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DM42_RS34630 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DM42_RS34640 SM00935 Outer membrane protein (OmpH-like) DM42_RS34690 SM00244 prohibitin homologues DM42_RS34735 SM00116 Domain in cystathionine beta-synthase and other proteins. DM42_RS34735 SM01240 DM42_RS34735 DM42_RS34750 SM00479 DM42_RS34750 DM42_RS34780 SM00567 E-Z type HEAT repeats DM42_RS34785 SM00382 ATPases associated with a variety of cellular activities DM42_RS34810 SM00345 helix_turn_helix gluconate operon transcriptional repressor DM42_RS34810 SM00866 DM42_RS34810 DM42_RS34835 SM00345 helix_turn_helix gluconate operon transcriptional repressor DM42_RS34835 SM00895 DM42_RS34835 DM42_RS34965 SM00487 DEAD-like helicases superfamily DM42_RS34965 SM00490 helicase superfamily c-terminal domain DM42_RS34965 SM00982 DM42_RS34965 DM42_RS34965 SM01058 CarD-like/TRCF domain DM42_RS34990 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DM42_RS34990 SM00387 Histidine kinase-like ATPases DM42_RS34990 SM00388 His Kinase A (phosphoacceptor) domain DM42_RS34995 SM00448 cheY-homologous receiver domain DM42_RS34995 SM00862 Transcriptional regulatory protein, C terminal DM42_RS35055 SM00421 helix_turn_helix, Lux Regulon DM42_RS35065 SM00347 helix_turn_helix multiple antibiotic resistance protein DM42_RS35085 SM00382 ATPases associated with a variety of cellular activities DM42_RS35085 SM00994 ClpX C4-type zinc finger DM42_RS35085 SM01086 C-terminal, D2-small domain, of ClpB protein DM42_RS35090 SM00382 ATPases associated with a variety of cellular activities DM42_RS35090 SM00464 Found in ATP-dependent protease La (LON) DM42_RS35115 SM00382 ATPases associated with a variety of cellular activities DM42_RS35135 SM01211 DM42_RS35135 DM42_RS35190 SM00267 diguanylate cyclase DM42_RS35210 SM00886 Stress responsive A/B Barrel Domain DM42_RS35260 SM00248 ankyrin repeats DM42_RS35300 SM00870 DM42_RS35300 DM42_RS35305 SM00257 Lysin motif DM42_RS35360 SM00382 ATPases associated with a variety of cellular activities DM42_RS35380 SM00670 Large family of predicted nucleotide-binding domains DM42_RS35445 SM00852 Probable molybdopterin binding domain DM42_RS35470 SM00382 ATPases associated with a variety of cellular activities DM42_RS35470 SM01086 C-terminal, D2-small domain, of ClpB protein DM42_RS35485 SM00422 helix_turn_helix, mercury resistance DM42_RS35495 SM00382 ATPases associated with a variety of cellular activities DM42_RS35505 SM00822 DM42_RS35505 DM42_RS35515 SM00861 Transketolase, pyrimidine binding domain DM42_RS35525 SM00729 Elongator protein 3, MiaB family, Radical SAM DM42_RS35555 SM00422 helix_turn_helix, mercury resistance DM42_RS35560 SM00357 Cold shock protein domain DM42_RS35560 SM00382 ATPases associated with a variety of cellular activities DM42_RS35560 SM00959 Rho termination factor, N-terminal domain DM42_RS35570 SM00382 ATPases associated with a variety of cellular activities DM42_RS35580 SM00493 DM42_RS35580 DM42_RS35600 SM00257 Lysin motif DM42_RS35630 SM00562 DM42_RS35630 DM42_RS35640 SM00530 Helix-turn-helix XRE-family like proteins DM42_RS35660 SM00564 beta-propeller repeat DM42_RS35665 SM00382 ATPases associated with a variety of cellular activities DM42_RS35680 SM00244 prohibitin homologues DM42_RS35685 SM00244 prohibitin homologues DM42_RS35700 SM00788 Adenylosuccinate synthetase DM42_RS35725 SM00316 Ribosomal protein S1-like RNA-binding domain DM42_RS35725 SM00732 Likely ribonuclease with RNase H fold. DM42_RS35740 SM00491 DM42_RS35740 DM42_RS35750 SM00363 S4 RNA-binding domain DM42_RS35885 SM00843 DM42_RS35885 DM42_RS35935 SM00530 Helix-turn-helix XRE-family like proteins DM42_RS36195 SM00857 Resolvase, N terminal domain DM42_RS36200 SM00729 Elongator protein 3, MiaB family, Radical SAM DM42_RS36230 SM00829 Enoylreductase DM42_RS36250 SM00382 ATPases associated with a variety of cellular activities DM42_RS36265 SM00382 ATPases associated with a variety of cellular activities DM42_RS36365 SM00382 ATPases associated with a variety of cellular activities DM42_RS36390 SM00849 Metallo-beta-lactamase superfamily DM42_RS36395 SM00091 PAS domain DM42_RS36395 SM00382 ATPases associated with a variety of cellular activities DM42_RS36405 SM00530 Helix-turn-helix XRE-family like proteins DM42_RS36415 SM00422 helix_turn_helix, mercury resistance DM42_RS36440 SM00116 Domain in cystathionine beta-synthase and other proteins. DM42_RS36475 SM00354 helix_turn _helix lactose operon repressor DM42_RS36500 SM00344 helix_turn_helix ASNC type DM42_RS36560 SM00530 Helix-turn-helix XRE-family like proteins DM42_RS36585 SM00382 ATPases associated with a variety of cellular activities DM42_RS36600 SM00342 helix_turn_helix, arabinose operon control protein DM42_RS36675 SM00347 helix_turn_helix multiple antibiotic resistance protein DM42_RS36800 SM00382 ATPases associated with a variety of cellular activities DM42_RS36835 SM00937 DM42_RS36835