locus-tag	class	description
CEJ98_RS00010	COG0592	DNA-directed DNA polymerase activity
CEJ98_RS00070	COG2197	response regulator
CEJ98_RS00075	COG2205	protein histidine kinase activity
CEJ98_RS00075	COG0784	Response regulator, receiver
CEJ98_RS00085	COG3038	cytochrome b561
CEJ98_RS00125	COG1987	bacterial-type flagellum assembly
CEJ98_RS00140	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CEJ98_RS00150	COG1580	Controls the rotational direction of flagella during chemotaxis
CEJ98_RS00155	COG1346	cytolysis
CEJ98_RS00165	COG0583	DNA-binding transcription factor activity
CEJ98_RS00170	COG1846	Transcriptional regulator
CEJ98_RS00210	COG2165	general secretion pathway protein
CEJ98_RS00220	COG2165	general secretion pathway protein
CEJ98_RS00255	COG0523	cobalamin synthesis protein
CEJ98_RS00280	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
CEJ98_RS00295	COG0505	Belongs to the CarA family
CEJ98_RS00300	COG1902	pentaerythritol trinitrate reductase activity
CEJ98_RS00310	COG0642	Histidine kinase
CEJ98_RS00330	COG3186	Phenylalanine-4-hydroxylase
CEJ98_RS00335	COG1522	sequence-specific DNA binding
CEJ98_RS00345	COG0583	DNA-binding transcription factor activity
CEJ98_RS00350	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
CEJ98_RS00405	COG0445	tRNA wobble uridine modification
CEJ98_RS00410	COG0357	Ribosomal RNA small subunit methyltransferase G
CEJ98_RS00415	COG1192	Involved in chromosome partitioning
CEJ98_RS00420	COG1475	DNA binding
CEJ98_RS00435	COG0356	it plays a direct role in the translocation of protons across the membrane
CEJ98_RS00445	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
CEJ98_RS00465	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
CEJ98_RS00470	COG0355	proton-transporting ATP synthase activity, rotational mechanism
CEJ98_RS00475	COG0318	PFAM AMP-dependent synthetase and ligase
CEJ98_RS00490	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
CEJ98_RS00500	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CEJ98_RS00505	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
CEJ98_RS00505	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
CEJ98_RS00505	COG0506	proline dehydrogenase activity
CEJ98_RS00510	COG0683	leucine binding
CEJ98_RS00515	COG0436	Aminotransferase
CEJ98_RS00530	COG0789	Transcriptional regulator
CEJ98_RS00550	COG0531	amino acid
CEJ98_RS00560	COG4302	ethanolamine ammonia-lyase activity
CEJ98_RS00565	COG1012	belongs to the aldehyde dehydrogenase family
CEJ98_RS00580	COG0028	Belongs to the TPP enzyme family
CEJ98_RS00585	COG1760	l-serine dehydratase
CEJ98_RS00595	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
CEJ98_RS00595	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
CEJ98_RS00600	COG0509	glycine decarboxylation via glycine cleavage system
CEJ98_RS00615	COG0673	inositol 2-dehydrogenase activity
CEJ98_RS00620	COG0210	DNA helicase
CEJ98_RS00625	COG3245	cytochrome
CEJ98_RS00635	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CEJ98_RS00640	COG0582	viral genome integration into host DNA
CEJ98_RS00795	COG3250	beta-galactosidase activity
CEJ98_RS00865	COG0840	transmembrane signaling receptor activity
CEJ98_RS00870	COG1309	transcriptional regulator
CEJ98_RS00875	COG0667	Aldo Keto reductase
CEJ98_RS00910	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS00915	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CEJ98_RS00925	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CEJ98_RS00960	COG0519	Catalyzes the synthesis of GMP from XMP
CEJ98_RS00970	COG0561	phosphatase activity
CEJ98_RS00975	COG2916	Histone family protein nucleoid-structuring protein H-NS
CEJ98_RS00980	COG0438	transferase activity, transferring glycosyl groups
CEJ98_RS01000	COG1360	Flagellar Motor Protein
CEJ98_RS01005	COG0784	Response regulator, receiver
CEJ98_RS01005	COG2205	protein histidine kinase activity
CEJ98_RS01005	COG2198	Histidine kinase
CEJ98_RS01020	COG0840	transmembrane signaling receptor activity
CEJ98_RS01025	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CEJ98_RS01030	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
CEJ98_RS01040	COG0745	RESPONSE REGULATOR receiver
CEJ98_RS01045	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
CEJ98_RS01065	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CEJ98_RS01085	COG1191	sigma factor activity
CEJ98_RS01095	COG1950	PFAM Membrane protein of
CEJ98_RS01100	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
CEJ98_RS01135	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
CEJ98_RS01140	COG1522	sequence-specific DNA binding
CEJ98_RS01150	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CEJ98_RS01170	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
CEJ98_RS01205	COG4771	TonB-dependent receptor
CEJ98_RS01215	COG4558	Periplasmic binding protein
CEJ98_RS01220	COG2203	Gaf domain
CEJ98_RS01220	COG5001	Diguanylate cyclase
CEJ98_RS01220	COG4251	negative regulation of phosphorylation
CEJ98_RS01220	COG3706	GGDEF domain
CEJ98_RS01230	COG2223	nitrite transmembrane transporter activity
CEJ98_RS01245	COG2084	Dehydrogenase
CEJ98_RS01250	COG1280	lysine exporter protein (LysE YggA)
CEJ98_RS01270	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
CEJ98_RS01275	COG1881	PFAM PEBP family protein
CEJ98_RS01280	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CEJ98_RS01285	COG0280	phosphate acetyltransferase
CEJ98_RS01285	COG0281	malic enzyme
CEJ98_RS01305	COG1522	sequence-specific DNA binding
CEJ98_RS01325	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CEJ98_RS01330	COG2151	metal-sulfur cluster biosynthetic enzyme
CEJ98_RS01335	COG3396	Phenylacetate-CoA oxygenase
CEJ98_RS01340	COG3460	Phenylacetate-CoA oxygenase
CEJ98_RS01345	COG3396	Phenylacetate-CoA oxygenase
CEJ98_RS01395	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CEJ98_RS01405	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CEJ98_RS01415	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
CEJ98_RS01420	COG0081	regulation of translation
CEJ98_RS01445	COG0583	DNA-binding transcription factor activity
CEJ98_RS01450	COG0477	Major facilitator Superfamily
CEJ98_RS01470	COG0477	Major facilitator Superfamily
CEJ98_RS01475	COG0235	Class ii aldolase
CEJ98_RS01485	COG0583	DNA-binding transcription factor activity
CEJ98_RS01495	COG0514	ATP-dependent DNA helicase (RecQ)
CEJ98_RS01515	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CEJ98_RS01530	COG0088	Forms part of the polypeptide exit tunnel
CEJ98_RS01540	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
CEJ98_RS01555	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
CEJ98_RS01595	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
CEJ98_RS01605	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
CEJ98_RS01625	COG0201	protein transport
CEJ98_RS01655	COG0202	RNA polymerase activity
CEJ98_RS01670	COG4232	protein-disulfide reductase activity
CEJ98_RS01690	COG1333	cytochrome c biogenesis protein
CEJ98_RS01695	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CEJ98_RS01700	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CEJ98_RS01705	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
CEJ98_RS01755	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
CEJ98_RS01760	COG0232	Belongs to the dGTPase family. Type 2 subfamily
CEJ98_RS01765	COG1653	transport
CEJ98_RS01775	COG0395	ABC-type sugar transport system, permease component
CEJ98_RS01785	COG0584	glycerophosphoryl diester phosphodiesterase
CEJ98_RS01800	COG0069	glutamate synthase activity
CEJ98_RS01800	COG0067	glutamate synthase
CEJ98_RS01800	COG0070	glutamate synthase
CEJ98_RS01810	COG4178	(ABC) transporter
CEJ98_RS01835	COG1127	ABC transporter
CEJ98_RS01840	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
CEJ98_RS01845	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
CEJ98_RS01865	COG1131	(ABC) transporter
CEJ98_RS01870	COG0842	Transport permease protein
CEJ98_RS01895	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CEJ98_RS01905	COG2095	MarC family integral membrane protein
CEJ98_RS01955	COG0805	protein transport
CEJ98_RS01960	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CEJ98_RS01965	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CEJ98_RS01970	COG0723	plastoquinol--plastocyanin reductase activity
CEJ98_RS01975	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
CEJ98_RS01980	COG2857	Cytochrome c1
CEJ98_RS01985	COG0625	glutathione transferase activity
CEJ98_RS01990	COG2969	positive regulation of protein catabolic process
CEJ98_RS02010	COG4682	membrane
CEJ98_RS02015	COG3706	GGDEF domain
CEJ98_RS02160	COG0443	Heat shock 70 kDa protein
CEJ98_RS02165	COG1278	Cold shock
CEJ98_RS02170	COG0531	amino acid
CEJ98_RS02175	COG3384	dioxygenase
CEJ98_RS02185	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
CEJ98_RS02190	COG2890	protein-(glutamine-N5) methyltransferase activity
CEJ98_RS02220	COG0488	(ABC) transporter
CEJ98_RS02255	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CEJ98_RS02275	COG2226	methyltransferase
CEJ98_RS02280	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CEJ98_RS02290	COG1262	PFAM Formylglycine-generating sulfatase enzyme
CEJ98_RS02290	COG0515	serine threonine protein kinase
CEJ98_RS02295	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CEJ98_RS02295	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CEJ98_RS02305	COG0012	GTP binding
CEJ98_RS02320	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CEJ98_RS02325	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CEJ98_RS02340	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
CEJ98_RS02355	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CEJ98_RS02360	COG0512	Glutamine amidotransferase of anthranilate synthase
CEJ98_RS02370	COG0546	phosphoglycolate phosphatase activity
CEJ98_RS02375	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CEJ98_RS02385	COG2967	ApaG domain
CEJ98_RS02390	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
CEJ98_RS02400	COG2050	protein possibly involved in aromatic compounds catabolism
CEJ98_RS02405	COG1024	Enoyl-CoA hydratase
CEJ98_RS02415	COG1024	Enoyl-CoA hydratase
CEJ98_RS02445	COG0243	molybdopterin cofactor binding
CEJ98_RS02450	COG0318	PFAM AMP-dependent synthetase and ligase
CEJ98_RS02455	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CEJ98_RS02475	COG3116	cell division
CEJ98_RS02485	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CEJ98_RS02490	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CEJ98_RS02495	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CEJ98_RS02510	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CEJ98_RS02525	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
CEJ98_RS02540	COG0678	peroxiredoxin activity
CEJ98_RS02545	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
CEJ98_RS02555	COG0653	protein targeting
CEJ98_RS02570	COG0494	nUDIX hydrolase
CEJ98_RS02575	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
CEJ98_RS02580	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
CEJ98_RS02590	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
CEJ98_RS02600	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CEJ98_RS02605	COG4536	flavin adenine dinucleotide binding
CEJ98_RS02615	COG0142	geranyltranstransferase activity
CEJ98_RS02630	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
CEJ98_RS02655	COG0442	prolyl-tRNA aminoacylation
CEJ98_RS02660	COG2095	MarC family integral membrane protein
CEJ98_RS02665	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
CEJ98_RS02670	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CEJ98_RS02685	COG3023	N-Acetylmuramoyl-L-alanine amidase
CEJ98_RS02720	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
CEJ98_RS02730	COG2264	protein methyltransferase activity
CEJ98_RS02735	COG0439	Biotin carboxylase
CEJ98_RS02740	COG0511	ligase activity, forming carbon-carbon bonds
CEJ98_RS02745	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
CEJ98_RS02750	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CEJ98_RS02760	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CEJ98_RS02765	COG3150	esterase
CEJ98_RS02775	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CEJ98_RS02785	COG1414	Transcriptional regulator
CEJ98_RS02790	COG3734	2-keto-3-deoxy-galactonokinase
CEJ98_RS02795	COG0800	Aldolase
CEJ98_RS02800	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS02815	COG1172	Belongs to the binding-protein-dependent transport system permease family
CEJ98_RS02820	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS02830	COG0284	orotidine-5'-phosphate decarboxylase activity
CEJ98_RS02835	COG1546	Belongs to the CinA family
CEJ98_RS02840	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
CEJ98_RS02870	COG1385	rRNA (uridine-N3-)-methyltransferase activity
CEJ98_RS02880	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
CEJ98_RS02885	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CEJ98_RS02890	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CEJ98_RS02900	COG1301	dicarboxylic acid transport
CEJ98_RS02905	COG4266	Belongs to the allantoicase family
CEJ98_RS02910	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
CEJ98_RS02915	COG0735	belongs to the Fur family
CEJ98_RS02920	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CEJ98_RS02940	COG0495	leucyl-tRNA aminoacylation
CEJ98_RS02950	COG1466	dna polymerase III delta subunit
CEJ98_RS02955	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
CEJ98_RS02960	COG1981	membrane
CEJ98_RS02975	COG0800	Aldolase
CEJ98_RS02985	COG3265	gluconokinase activity
CEJ98_RS02995	COG2223	nitrite transmembrane transporter activity
CEJ98_RS03000	COG0583	DNA-binding transcription factor activity
CEJ98_RS03005	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CEJ98_RS03015	COG0765	amino acid transport
CEJ98_RS03020	COG0765	amino acid transport
CEJ98_RS03025	COG1126	abc transporter atp-binding protein
CEJ98_RS03030	COG0121	glutamine amidotransferase
CEJ98_RS03035	COG0418	dihydroorotase activity
CEJ98_RS03080	COG1490	D-aminoacyl-tRNA deacylase activity
CEJ98_RS03085	COG0588	phosphoglycerate mutase activity
CEJ98_RS03100	COG2255	four-way junction helicase activity
CEJ98_RS03120	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
CEJ98_RS03130	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CEJ98_RS03135	COG0006	proline dipeptidase activity
CEJ98_RS03140	COG0625	glutathione transferase activity
CEJ98_RS03145	COG0069	glutamate synthase activity
CEJ98_RS03150	COG0482	sulfurtransferase activity
CEJ98_RS03200	COG3008	intermembrane lipid transfer
CEJ98_RS03200	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
CEJ98_RS03205	COG2995	paraquat-inducible protein a
CEJ98_RS03225	COG2353	YceI-like domain
CEJ98_RS03230	COG2746	aminoglycoside 3-N-acetyltransferase activity
CEJ98_RS03235	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CEJ98_RS03240	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CEJ98_RS03245	COG1862	Preprotein translocase
CEJ98_RS03250	COG0343	queuine tRNA-ribosyltransferase activity
CEJ98_RS03260	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CEJ98_RS03275	COG0783	Belongs to the Dps family
CEJ98_RS03305	COG0247	lactate metabolic process
CEJ98_RS03310	COG0277	FAD linked oxidase domain protein
CEJ98_RS03315	COG0277	FAD linked oxidase domain protein
CEJ98_RS03320	COG0277	FAD linked oxidase domain protein
CEJ98_RS03325	COG2096	Adenosyltransferase
CEJ98_RS03330	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CEJ98_RS03330	COG1017	nitric oxide dioxygenase activity
CEJ98_RS03335	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CEJ98_RS03345	COG0312	modulator of DNA gyrase
CEJ98_RS03350	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CEJ98_RS03360	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
CEJ98_RS03370	COG0497	DNA recombination
CEJ98_RS03420	COG1428	Deoxynucleoside kinase
CEJ98_RS03425	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
CEJ98_RS03430	COG0617	tRNA 3'-terminal CCA addition
CEJ98_RS03440	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
CEJ98_RS03455	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
CEJ98_RS03460	COG0586	Pfam SNARE associated Golgi protein
CEJ98_RS03505	COG0438	transferase activity, transferring glycosyl groups
CEJ98_RS03510	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
CEJ98_RS03515	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CEJ98_RS03560	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS03560	COG0604	alcohol dehydrogenase
CEJ98_RS03560	COG3321	synthase
CEJ98_RS03565	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
CEJ98_RS03570	COG0156	8-amino-7-oxononanoate synthase activity
CEJ98_RS03585	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CEJ98_RS03600	COG0583	DNA-binding transcription factor activity
CEJ98_RS03605	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS03660	COG0824	Thioesterase
CEJ98_RS03665	COG4221	oxidoreductase activity
CEJ98_RS03725	COG0450	alkyl hydroperoxide reductase
CEJ98_RS03745	COG2814	Major facilitator Superfamily
CEJ98_RS03755	COG2814	Major facilitator Superfamily
CEJ98_RS03760	COG0778	Nitroreductase
CEJ98_RS03765	COG0583	DNA-binding transcription factor activity
CEJ98_RS03775	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
CEJ98_RS03790	COG1529	Aldehyde oxidase and xanthine dehydrogenase
CEJ98_RS03810	COG0583	DNA-binding transcription factor activity
CEJ98_RS03830	COG0730	response to heat
CEJ98_RS03845	COG2376	Dihydroxyacetone kinase
CEJ98_RS03850	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
CEJ98_RS03865	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CEJ98_RS03880	COG1773	rubredoxin
CEJ98_RS03900	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
CEJ98_RS03905	COG0540	Belongs to the ATCase OTCase family
CEJ98_RS03950	COG1216	Glycosyl transferase, family 2
CEJ98_RS03950	COG0438	transferase activity, transferring glycosyl groups
CEJ98_RS03970	COG2226	methyltransferase
CEJ98_RS03985	COG1215	transferase activity, transferring glycosyl groups
CEJ98_RS04000	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CEJ98_RS04015	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CEJ98_RS04060	COG0830	nickel cation binding
CEJ98_RS04070	COG0804	urea catabolic process
CEJ98_RS04075	COG0832	Belongs to the urease beta subunit family
CEJ98_RS04100	COG1695	Transcriptional regulator
CEJ98_RS04140	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CEJ98_RS04195	COG0762	integral membrane protein
CEJ98_RS04215	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
CEJ98_RS04230	COG0436	Aminotransferase
CEJ98_RS04235	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CEJ98_RS04250	COG1280	lysine exporter protein (LysE YggA)
CEJ98_RS04265	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CEJ98_RS04270	COG2140	Oxalate decarboxylase
CEJ98_RS04275	COG1914	H( )-stimulated, divalent metal cation uptake system
CEJ98_RS04295	COG0697	spore germination
CEJ98_RS04300	COG2814	Major facilitator Superfamily
CEJ98_RS04325	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
CEJ98_RS04330	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CEJ98_RS04350	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CEJ98_RS04350	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CEJ98_RS04365	COG2814	Major facilitator Superfamily
CEJ98_RS04375	COG0363	glucosamine-6-phosphate deaminase activity
CEJ98_RS04380	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CEJ98_RS04390	COG1175	transmembrane transport
CEJ98_RS04395	COG0395	ABC-type sugar transport system, permease component
CEJ98_RS04400	COG3842	ATPase activity
CEJ98_RS04405	COG1193	negative regulation of DNA recombination
CEJ98_RS04410	COG0492	ferredoxin-NADP+ reductase activity
CEJ98_RS04415	COG1674	ftsk spoiiie
CEJ98_RS04420	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
CEJ98_RS04425	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CEJ98_RS04460	COG2894	cell division
CEJ98_RS04480	COG0477	Major facilitator Superfamily
CEJ98_RS04505	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CEJ98_RS04510	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
CEJ98_RS04520	COG1561	YicC-like family, N-terminal region
CEJ98_RS04535	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CEJ98_RS04565	COG1278	Cold shock
CEJ98_RS04570	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CEJ98_RS04570	COG1199	ATP-dependent helicase activity
CEJ98_RS04595	COG0308	aminopeptidase N
CEJ98_RS04605	COG0402	S-adenosylhomocysteine deaminase activity
CEJ98_RS04610	COG2252	PERMEase
CEJ98_RS04615	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
CEJ98_RS04635	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
CEJ98_RS04665	COG3383	formate dehydrogenase (NAD+) activity
CEJ98_RS04680	COG1910	domain protein
CEJ98_RS04705	COG1793	dna ligase
CEJ98_RS04705	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
CEJ98_RS04710	COG1793	dna ligase
CEJ98_RS04715	COG1201	RNA secondary structure unwinding
CEJ98_RS04730	COG0546	phosphoglycolate phosphatase activity
CEJ98_RS04735	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CEJ98_RS04760	COG1605	Chorismate mutase
CEJ98_RS04760	COG0077	Prephenate dehydratase
CEJ98_RS04765	COG0287	Prephenate dehydrogenase
CEJ98_RS04770	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
CEJ98_RS04785	COG0776	regulation of translation
CEJ98_RS04795	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
CEJ98_RS04805	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
CEJ98_RS04825	COG2951	lytic endotransglycosylase activity
CEJ98_RS04835	COG2267	carboxylic ester hydrolase activity
CEJ98_RS04845	COG2011	ABC-type metal ion transport system permease component
CEJ98_RS04865	COG1960	acyl-CoA dehydrogenase activity
CEJ98_RS04895	COG0228	four-way junction DNA binding
CEJ98_RS04905	COG0336	Belongs to the RNA methyltransferase TrmD family
CEJ98_RS04915	COG0494	nUDIX hydrolase
CEJ98_RS04935	COG0501	Belongs to the peptidase M48B family
CEJ98_RS04945	COG0521	Mo-molybdopterin cofactor biosynthetic process
CEJ98_RS04955	COG0312	modulator of DNA gyrase
CEJ98_RS04960	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CEJ98_RS04965	COG2204	response regulator
CEJ98_RS04985	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
CEJ98_RS05005	COG1607	acyl-coa hydrolase
CEJ98_RS05010	COG0114	fumarate hydratase activity
CEJ98_RS05015	COG0534	Mate efflux family protein
CEJ98_RS05020	COG2501	S4 domain
CEJ98_RS05060	COG3045	CreA protein
CEJ98_RS05075	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
CEJ98_RS05105	COG1322	Protein conserved in bacteria
CEJ98_RS05120	COG0303	'Molybdopterin
CEJ98_RS05130	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CEJ98_RS05135	COG1530	ribonuclease E activity
CEJ98_RS05150	COG0546	phosphoglycolate phosphatase activity
CEJ98_RS05160	COG0616	signal peptide processing
CEJ98_RS05160	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
CEJ98_RS05175	COG1399	metal-binding, possibly nucleic acid-binding protein
CEJ98_RS05200	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS05210	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CEJ98_RS05220	COG1595	DNA-templated transcription, initiation
CEJ98_RS05235	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CEJ98_RS05250	COG0681	Belongs to the peptidase S26 family
CEJ98_RS05255	COG0571	ribonuclease III activity
CEJ98_RS05260	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CEJ98_RS05270	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
CEJ98_RS05285	COG2204	response regulator
CEJ98_RS05300	COG0322	excinuclease ABC activity
CEJ98_RS05305	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CEJ98_RS05375	COG1956	GAF domain-containing protein
CEJ98_RS05380	COG0583	DNA-binding transcription factor activity
CEJ98_RS05390	COG2153	protein acetylation
CEJ98_RS05400	COG1999	signal sequence binding
CEJ98_RS05410	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
CEJ98_RS05415	COG1132	(ABC) transporter
CEJ98_RS05420	COG0438	transferase activity, transferring glycosyl groups
CEJ98_RS05440	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CEJ98_RS05445	COG3511	phospholipase C
CEJ98_RS05460	COG0596	Alpha beta hydrolase
CEJ98_RS05480	COG3394	polysaccharide catabolic process
CEJ98_RS05535	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CEJ98_RS05550	COG1012	belongs to the aldehyde dehydrogenase family
CEJ98_RS05560	COG2988	succinylglutamate desuccinylase activity
CEJ98_RS05580	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
CEJ98_RS05595	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CEJ98_RS05600	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CEJ98_RS05605	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CEJ98_RS05620	COG0004	ammonium transporteR
CEJ98_RS05645	COG1522	sequence-specific DNA binding
CEJ98_RS05655	COG1289	transmembrane transporter activity
CEJ98_RS05660	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
CEJ98_RS05665	COG1074	ATP-dependent DNA helicase activity
CEJ98_RS05670	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
CEJ98_RS05680	COG2199	diguanylate cyclase activity
CEJ98_RS05680	COG2200	EAL domain
CEJ98_RS05680	COG2203	Gaf domain
CEJ98_RS05700	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
CEJ98_RS05710	COG0697	spore germination
CEJ98_RS05715	COG2814	Major facilitator Superfamily
CEJ98_RS05720	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
CEJ98_RS05725	COG3842	ATPase activity
CEJ98_RS05730	COG1177	transmembrane transport
CEJ98_RS05735	COG4149	molybdate abc transporter
CEJ98_RS05740	COG1840	ABC-type Fe3 transport system, periplasmic component
CEJ98_RS05745	COG1609	Transcriptional regulator
CEJ98_RS05790	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
CEJ98_RS05825	COG2207	Transcriptional regulator
CEJ98_RS05850	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CEJ98_RS05850	COG1017	nitric oxide dioxygenase activity
CEJ98_RS05855	COG0625	glutathione transferase activity
CEJ98_RS05870	COG3209	COG3209 Rhs family protein
CEJ98_RS05885	COG0753	catalase activity
CEJ98_RS05890	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CEJ98_RS05895	COG2134	cdp-diacylglycerol pyrophosphatase
CEJ98_RS05900	COG1595	DNA-templated transcription, initiation
CEJ98_RS05910	COG0583	DNA-binding transcription factor activity
CEJ98_RS05925	COG3038	cytochrome b561
CEJ98_RS05955	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CEJ98_RS05965	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CEJ98_RS05980	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
CEJ98_RS06005	COG0625	glutathione transferase activity
CEJ98_RS06010	COG0604	alcohol dehydrogenase
CEJ98_RS06025	COG0668	transmembrane transport
CEJ98_RS06040	COG4336	lyase activity
CEJ98_RS06055	COG1984	allophanate hydrolase subunit 2
CEJ98_RS06060	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
CEJ98_RS06070	COG0583	DNA-binding transcription factor activity
CEJ98_RS06080	COG2271	Major facilitator Superfamily
CEJ98_RS06085	COG1846	Transcriptional regulator
CEJ98_RS06090	COG2010	Cytochrome c
CEJ98_RS06090	COG1529	Aldehyde oxidase and xanthine dehydrogenase
CEJ98_RS06095	COG1335	isochorismatase
CEJ98_RS06100	COG2309	aminopeptidase activity
CEJ98_RS06105	COG0596	Alpha beta hydrolase
CEJ98_RS06110	COG3473	Maleate cis-trans isomerase
CEJ98_RS06115	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CEJ98_RS06120	COG2080	2 iron, 2 sulfur cluster binding
CEJ98_RS06125	COG1529	Aldehyde oxidase and xanthine dehydrogenase
CEJ98_RS06125	COG2010	Cytochrome c
CEJ98_RS06140	COG0583	DNA-binding transcription factor activity
CEJ98_RS06145	COG2957	Belongs to the agmatine deiminase family
CEJ98_RS06150	COG1914	H( )-stimulated, divalent metal cation uptake system
CEJ98_RS06155	COG0215	cysteine-tRNA ligase activity
CEJ98_RS06160	COG0720	synthase
CEJ98_RS06165	COG0257	Belongs to the bacterial ribosomal protein bL36 family
CEJ98_RS06175	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
CEJ98_RS06180	COG0579	oxidoreductase
CEJ98_RS06185	COG0583	DNA-binding transcription factor activity
CEJ98_RS06190	COG4948	Mandelate Racemase Muconate Lactonizing
CEJ98_RS06195	COG1301	dicarboxylic acid transport
CEJ98_RS06230	COG2814	Major facilitator Superfamily
CEJ98_RS06260	COG1349	DNA-binding transcription factor activity
CEJ98_RS06265	COG2814	Major facilitator Superfamily
CEJ98_RS06275	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CEJ98_RS06290	COG2814	Major facilitator Superfamily
CEJ98_RS06295	COG2814	Major facilitator Superfamily
CEJ98_RS06300	COG0656	L-ascorbic acid biosynthetic process
CEJ98_RS06315	COG0071	Belongs to the small heat shock protein (HSP20) family
CEJ98_RS06325	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
CEJ98_RS06330	COG1250	3-hydroxyacyl-CoA dehydrogenase
CEJ98_RS06345	COG0583	DNA-binding transcription factor activity
CEJ98_RS06355	COG3052	prosthetic group binding
CEJ98_RS06375	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
CEJ98_RS06415	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CEJ98_RS06420	COG0328	RNA-DNA hybrid ribonuclease activity
CEJ98_RS06430	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CEJ98_RS06435	COG0741	lytic transglycosylase activity
CEJ98_RS06435	COG1388	LysM domain
CEJ98_RS06445	COG0505	Belongs to the CarA family
CEJ98_RS06455	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
CEJ98_RS06460	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CEJ98_RS06470	COG1534	Rna-binding protein
CEJ98_RS06480	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CEJ98_RS06485	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
CEJ98_RS06495	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CEJ98_RS06500	COG0573	inorganic phosphate transmembrane transporter activity
CEJ98_RS06505	COG0581	inorganic phosphate transmembrane transporter activity
CEJ98_RS06520	COG0745	RESPONSE REGULATOR receiver
CEJ98_RS06530	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
CEJ98_RS06585	COG2204	response regulator
CEJ98_RS06590	COG2204	response regulator
CEJ98_RS06645	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
CEJ98_RS06655	COG2226	methyltransferase
CEJ98_RS06690	COG1309	transcriptional regulator
CEJ98_RS06710	COG2070	2-Nitropropane dioxygenase
CEJ98_RS06720	COG0477	Major facilitator Superfamily
CEJ98_RS06745	COG0583	DNA-binding transcription factor activity
CEJ98_RS06760	COG1129	ABC transporter
CEJ98_RS06775	COG3386	PFAM SMP-30 Gluconolaconase
CEJ98_RS06780	COG1132	(ABC) transporter
CEJ98_RS06810	COG0534	Mate efflux family protein
CEJ98_RS06820	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CEJ98_RS06825	COG4942	peptidase
CEJ98_RS06865	COG2271	Major facilitator Superfamily
CEJ98_RS06870	COG2271	Major facilitator Superfamily
CEJ98_RS06875	COG1609	Transcriptional regulator
CEJ98_RS06890	COG0456	acetyltransferase
CEJ98_RS06900	COG2824	Alkylphosphonate utilization operon protein PhnA
CEJ98_RS06910	COG1902	pentaerythritol trinitrate reductase activity
CEJ98_RS06915	COG0604	alcohol dehydrogenase
CEJ98_RS06920	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CEJ98_RS06925	COG0673	inositol 2-dehydrogenase activity
CEJ98_RS06930	COG0583	DNA-binding transcription factor activity
CEJ98_RS06940	COG0583	DNA-binding transcription factor activity
CEJ98_RS06945	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS06950	COG2271	Major facilitator Superfamily
CEJ98_RS06955	COG3959	Transketolase, thiamine diphosphate binding domain
CEJ98_RS06960	COG3958	Transketolase
CEJ98_RS06970	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
CEJ98_RS07010	COG1309	transcriptional regulator
CEJ98_RS07015	COG0583	DNA-binding transcription factor activity
CEJ98_RS07050	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CEJ98_RS07055	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CEJ98_RS07060	COG2423	ornithine cyclodeaminase activity
CEJ98_RS07075	COG0529	Catalyzes the synthesis of activated sulfate
CEJ98_RS07080	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CEJ98_RS07090	COG1538	Outer membrane efflux protein
CEJ98_RS07110	COG2175	clavaminate synthase activity
CEJ98_RS07130	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CEJ98_RS07135	COG3958	Transketolase
CEJ98_RS07145	COG2755	lipolytic protein G-D-S-L family
CEJ98_RS07145	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
CEJ98_RS07150	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
CEJ98_RS07165	COG2895	sulfate adenylyltransferase (ATP) activity
CEJ98_RS07185	COG1012	belongs to the aldehyde dehydrogenase family
CEJ98_RS07190	COG1309	transcriptional regulator
CEJ98_RS07220	COG0519	Catalyzes the synthesis of GMP from XMP
CEJ98_RS07220	COG0518	GMP synthase (glutamine-hydrolyzing) activity
CEJ98_RS07225	COG1349	DNA-binding transcription factor activity
CEJ98_RS07235	COG3395	kinase activity
CEJ98_RS07240	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
CEJ98_RS07260	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CEJ98_RS07265	COG0765	amino acid transport
CEJ98_RS07270	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CEJ98_RS07275	COG1126	abc transporter atp-binding protein
CEJ98_RS07280	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CEJ98_RS07285	COG0583	DNA-binding transcription factor activity
CEJ98_RS07290	COG0840	transmembrane signaling receptor activity
CEJ98_RS07305	COG4948	Mandelate Racemase Muconate Lactonizing
CEJ98_RS07310	COG2271	Major facilitator Superfamily
CEJ98_RS07320	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CEJ98_RS07335	COG1301	dicarboxylic acid transport
CEJ98_RS07365	COG3220	belongs to the UPF0276 family
CEJ98_RS07385	COG3251	PFAM MbtH domain protein
CEJ98_RS07395	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CEJ98_RS07410	COG0137	argininosuccinate synthase activity
CEJ98_RS07415	COG0165	Argininosuccinate lyase
CEJ98_RS07435	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CEJ98_RS07460	COG2192	nodulation
CEJ98_RS07500	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CEJ98_RS07500	COG0512	Glutamine amidotransferase of anthranilate synthase
CEJ98_RS07515	COG0747	negative chemotaxis
CEJ98_RS07520	COG0601	transmembrane transport
CEJ98_RS07525	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CEJ98_RS07535	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CEJ98_RS07550	COG2423	ornithine cyclodeaminase activity
CEJ98_RS07560	COG4804	nuclease activity
CEJ98_RS07575	COG2271	Major facilitator Superfamily
CEJ98_RS07585	COG4948	Mandelate Racemase Muconate Lactonizing
CEJ98_RS07590	COG2721	sulfolactate sulfo-lyase activity
CEJ98_RS07595	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CEJ98_RS07600	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS07610	COG2706	6-phosphogluconolactonase activity
CEJ98_RS07615	COG0667	Aldo Keto reductase
CEJ98_RS07650	COG2814	Major facilitator Superfamily
CEJ98_RS07660	COG1960	acyl-CoA dehydrogenase activity
CEJ98_RS07665	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
CEJ98_RS07670	COG0583	DNA-binding transcription factor activity
CEJ98_RS07675	COG1737	Transcriptional regulator
CEJ98_RS07675	COG0837	glucose binding
CEJ98_RS07785	COG0124	histidyl-tRNA synthetase
CEJ98_RS07790	COG3511	phospholipase C
CEJ98_RS07795	COG1858	cytochrome C peroxidase
CEJ98_RS07805	COG0494	nUDIX hydrolase
CEJ98_RS07810	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CEJ98_RS07820	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CEJ98_RS07845	COG1609	Transcriptional regulator
CEJ98_RS07845	COG2207	Transcriptional regulator
CEJ98_RS07850	COG4213	ABC transporter substrate-binding protein
CEJ98_RS07855	COG1129	ABC transporter
CEJ98_RS07860	COG4214	carbohydrate transport
CEJ98_RS07875	COG0477	Major facilitator Superfamily
CEJ98_RS07885	COG2816	NAD+ diphosphatase activity
CEJ98_RS07900	COG0824	Thioesterase
CEJ98_RS07920	COG3718	enzyme involved in inositol metabolism
CEJ98_RS07930	COG3962	Belongs to the TPP enzyme family
CEJ98_RS07945	COG1172	Belongs to the binding-protein-dependent transport system permease family
CEJ98_RS07960	COG0673	inositol 2-dehydrogenase activity
CEJ98_RS07965	COG0673	inositol 2-dehydrogenase activity
CEJ98_RS07970	COG0425	Belongs to the sulfur carrier protein TusA family
CEJ98_RS07990	COG0745	RESPONSE REGULATOR receiver
CEJ98_RS08000	COG2205	protein histidine kinase activity
CEJ98_RS08015	COG0525	valine-tRNA ligase activity
CEJ98_RS08020	COG0210	DNA helicase
CEJ98_RS08025	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CEJ98_RS08030	COG2223	nitrite transmembrane transporter activity
CEJ98_RS08035	COG0840	transmembrane signaling receptor activity
CEJ98_RS08060	COG0583	DNA-binding transcription factor activity
CEJ98_RS08070	COG0277	FAD linked oxidase domain protein
CEJ98_RS08085	COG1295	ribonuclease BN
CEJ98_RS08100	COG0477	Major facilitator Superfamily
CEJ98_RS08115	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS08140	COG2267	carboxylic ester hydrolase activity
CEJ98_RS08145	COG0251	oxidation-reduction process
CEJ98_RS08150	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CEJ98_RS08165	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CEJ98_RS08170	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
CEJ98_RS08185	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
CEJ98_RS08195	COG0776	regulation of translation
CEJ98_RS08215	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CEJ98_RS08485	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
CEJ98_RS08525	COG0583	DNA-binding transcription factor activity
CEJ98_RS08530	COG0436	Aminotransferase
CEJ98_RS08535	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
CEJ98_RS08540	COG1187	pseudouridine synthase activity
CEJ98_RS08545	COG0779	Required for maturation of 30S ribosomal subunits
CEJ98_RS08550	COG0195	Participates in both transcription termination and antitermination
CEJ98_RS08550	COG2251	uridine kinase activity
CEJ98_RS08555	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
CEJ98_RS08570	COG2814	Major facilitator Superfamily
CEJ98_RS08575	COG1566	PFAM secretion protein HlyD family protein
CEJ98_RS08585	COG1846	Transcriptional regulator
CEJ98_RS08595	COG1217	gtp-binding protein TYPA
CEJ98_RS08600	COG0567	Dehydrogenase, E1 component
CEJ98_RS08605	COG0508	dehydrogenase complex catalyzes the overall conversion of
CEJ98_RS08610	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CEJ98_RS08615	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
CEJ98_RS08665	COG4964	Belongs to the GSP D family
CEJ98_RS08725	COG0318	PFAM AMP-dependent synthetase and ligase
CEJ98_RS08735	COG2814	Major facilitator Superfamily
CEJ98_RS08765	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CEJ98_RS08780	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS08795	COG2818	Glycosylase
CEJ98_RS08805	COG0557	exoribonuclease II activity
CEJ98_RS08815	COG3023	N-Acetylmuramoyl-L-alanine amidase
CEJ98_RS08835	COG0765	amino acid transport
CEJ98_RS08840	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CEJ98_RS08850	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
CEJ98_RS08890	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CEJ98_RS08960	COG1690	Belongs to the RtcB family
CEJ98_RS09180	COG4386	tail sheath protein
CEJ98_RS09215	COG4381	Mu-like prophage protein gp46
CEJ98_RS09220	COG3299	homolog of phage Mu protein gp47
CEJ98_RS09250	COG3179	chitinase
CEJ98_RS09280	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CEJ98_RS09295	COG2321	neutral zinc metallopeptidase
CEJ98_RS09300	COG0701	Predicted permease
CEJ98_RS09320	COG0589	response to stress
CEJ98_RS09345	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
CEJ98_RS09350	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
CEJ98_RS09355	COG4208	sulfate ABC transporter
CEJ98_RS09360	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
CEJ98_RS09365	COG0583	DNA-binding transcription factor activity
CEJ98_RS09370	COG1879	ABC-type sugar transport system periplasmic component
CEJ98_RS09375	COG1129	ABC transporter
CEJ98_RS09385	COG1609	Transcriptional regulator
CEJ98_RS09390	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CEJ98_RS09395	COG2766	serine protein kinase
CEJ98_RS09400	COG2718	Belongs to the UPF0229 family
CEJ98_RS09405	COG2719	SpoVR family
CEJ98_RS09410	COG0477	Major facilitator Superfamily
CEJ98_RS09475	COG1414	Transcriptional regulator
CEJ98_RS09495	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CEJ98_RS09500	COG1881	PFAM PEBP family protein
CEJ98_RS09515	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CEJ98_RS09520	COG1120	ATPase activity
CEJ98_RS09540	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CEJ98_RS09550	COG2099	Precorrin-6x reductase
CEJ98_RS09560	COG0625	glutathione transferase activity
CEJ98_RS09570	COG0024	Methionine aminopeptidase
CEJ98_RS09575	COG0583	DNA-binding transcription factor activity
CEJ98_RS09590	COG1174	glycine betaine transport
CEJ98_RS09595	COG1125	glycine betaine transport
CEJ98_RS09600	COG1174	glycine betaine transport
CEJ98_RS09605	COG1732	Glycine betaine
CEJ98_RS09620	COG2199	diguanylate cyclase activity
CEJ98_RS09620	COG2203	Gaf domain
CEJ98_RS09630	COG3511	phospholipase C
CEJ98_RS09640	COG0517	IMP dehydrogenase activity
CEJ98_RS09640	COG0516	GMP reductase activity
CEJ98_RS09655	COG2391	methyltransferase activity
CEJ98_RS09690	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CEJ98_RS09705	COG0179	Fumarylacetoacetate (FAA) hydrolase
CEJ98_RS09725	COG2851	Citrate transporter
CEJ98_RS09730	COG0583	DNA-binding transcription factor activity
CEJ98_RS09755	COG2986	histidine ammonia-lyase
CEJ98_RS09760	COG2188	Transcriptional regulator
CEJ98_RS09765	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
CEJ98_RS09795	COG4948	Mandelate Racemase Muconate Lactonizing
CEJ98_RS09800	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS09840	COG1139	Iron-sulfur cluster binding protein
CEJ98_RS09845	COG0247	lactate metabolic process
CEJ98_RS09850	COG2186	Transcriptional regulator
CEJ98_RS09855	COG0402	S-adenosylhomocysteine deaminase activity
CEJ98_RS09880	COG0183	Belongs to the thiolase family
CEJ98_RS09950	COG0318	PFAM AMP-dependent synthetase and ligase
CEJ98_RS09960	COG4771	TonB-dependent receptor
CEJ98_RS09995	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CEJ98_RS10035	COG1215	transferase activity, transferring glycosyl groups
CEJ98_RS10055	COG3634	alkyl hydroperoxide reductase activity
CEJ98_RS10060	COG0625	glutathione transferase activity
CEJ98_RS10080	COG1595	DNA-templated transcription, initiation
CEJ98_RS10085	COG0740	serine-type endopeptidase activity
CEJ98_RS10090	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CEJ98_RS10095	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CEJ98_RS10105	COG1695	Transcriptional regulator
CEJ98_RS10110	COG0446	pyridine nucleotide-disulphide oxidoreductase
CEJ98_RS10110	COG1902	pentaerythritol trinitrate reductase activity
CEJ98_RS10120	COG1024	Enoyl-CoA hydratase
CEJ98_RS10130	COG1595	DNA-templated transcription, initiation
CEJ98_RS10135	COG4944	Protein of unknown function (DUF1109)
CEJ98_RS10140	COG0297	glycogen (starch) synthase activity
CEJ98_RS10170	COG2271	Major facilitator Superfamily
CEJ98_RS10175	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
CEJ98_RS10180	COG0583	DNA-binding transcription factor activity
CEJ98_RS10185	COG1737	Transcriptional regulator
CEJ98_RS10200	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS10215	COG0395	ABC-type sugar transport system, permease component
CEJ98_RS10220	COG2706	6-phosphogluconolactonase activity
CEJ98_RS10245	COG1309	transcriptional regulator
CEJ98_RS10250	COG0583	DNA-binding transcription factor activity
CEJ98_RS10255	COG1473	amidohydrolase
CEJ98_RS10260	COG0583	DNA-binding transcription factor activity
CEJ98_RS10280	COG5487	UPF0391 membrane protein
CEJ98_RS10290	COG1335	isochorismatase
CEJ98_RS10345	COG3064	Membrane
CEJ98_RS10355	COG3059	membrane
CEJ98_RS10380	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
CEJ98_RS10395	COG1609	Transcriptional regulator
CEJ98_RS10400	COG1879	ABC-type sugar transport system periplasmic component
CEJ98_RS10405	COG1129	ABC transporter
CEJ98_RS10410	COG1172	Belongs to the binding-protein-dependent transport system permease family
CEJ98_RS10420	COG0434	BtpA family
CEJ98_RS10425	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CEJ98_RS10455	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
CEJ98_RS10470	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CEJ98_RS10555	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CEJ98_RS10575	COG1609	Transcriptional regulator
CEJ98_RS10580	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CEJ98_RS10585	COG0477	Major facilitator Superfamily
CEJ98_RS10590	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS10615	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
CEJ98_RS10620	COG1309	transcriptional regulator
CEJ98_RS10625	COG0604	alcohol dehydrogenase
CEJ98_RS10700	COG0583	DNA-binding transcription factor activity
CEJ98_RS10710	COG2233	PERMEase
CEJ98_RS10725	COG0604	alcohol dehydrogenase
CEJ98_RS10735	COG2207	Transcriptional regulator
CEJ98_RS10745	COG4221	oxidoreductase activity
CEJ98_RS10765	COG1196	nuclear chromosome segregation
CEJ98_RS10765	COG3264	Mechanosensitive ion channel
CEJ98_RS10785	COG0598	Magnesium transport protein CorA
CEJ98_RS10800	COG0668	transmembrane transport
CEJ98_RS10840	COG1609	Transcriptional regulator
CEJ98_RS10855	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CEJ98_RS10870	COG3121	Chaperone
CEJ98_RS10875	COG3188	usher protein
CEJ98_RS10895	COG2855	membrane
CEJ98_RS10900	COG0038	chloride channel
CEJ98_RS10910	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CEJ98_RS10915	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CEJ98_RS10925	COG0583	DNA-binding transcription factor activity
CEJ98_RS10945	COG1177	transmembrane transport
CEJ98_RS10950	COG1176	ABC-type spermidine putrescine transport system, permease component I
CEJ98_RS10955	COG3842	ATPase activity
CEJ98_RS10960	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
CEJ98_RS10975	COG3047	cAMP biosynthetic process
CEJ98_RS10980	COG2070	2-Nitropropane dioxygenase
CEJ98_RS10985	COG1280	lysine exporter protein (LysE YggA)
CEJ98_RS10990	COG0488	(ABC) transporter
CEJ98_RS10995	COG2982	Protein involved in outer membrane biogenesis
CEJ98_RS11000	COG1122	ATPase activity
CEJ98_RS11020	COG0583	DNA-binding transcription factor activity
CEJ98_RS11025	COG0560	Phosphoserine phosphatase
CEJ98_RS11030	COG0626	cystathionine gamma-synthase activity
CEJ98_RS11040	COG0183	Belongs to the thiolase family
CEJ98_RS11060	COG0745	RESPONSE REGULATOR receiver
CEJ98_RS11070	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS11075	COG0183	Belongs to the thiolase family
CEJ98_RS11080	COG3243	poly(R)-hydroxyalkanoic acid synthase
CEJ98_RS11090	COG0564	pseudouridine synthase activity
CEJ98_RS11100	COG1199	ATP-dependent helicase activity
CEJ98_RS11115	COG2183	response to ionizing radiation
CEJ98_RS11125	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
CEJ98_RS11135	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
CEJ98_RS11145	COG0330	HflC and HflK could
CEJ98_RS11150	COG0330	HflC and HflK could
CEJ98_RS11155	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CEJ98_RS11170	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CEJ98_RS11180	COG0124	histidyl-tRNA synthetase
CEJ98_RS11185	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
CEJ98_RS11195	COG0820	rRNA (adenine-C2-)-methyltransferase activity
CEJ98_RS11200	COG0105	UTP biosynthetic process
CEJ98_RS11205	COG0670	Belongs to the BI1 family
CEJ98_RS11235	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CEJ98_RS11245	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CEJ98_RS11260	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CEJ98_RS11275	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CEJ98_RS11280	COG0789	Transcriptional regulator
CEJ98_RS11290	COG3228	Belongs to the MtfA family
CEJ98_RS11295	COG0254	rRNA binding
CEJ98_RS11305	COG0534	Mate efflux family protein
CEJ98_RS11315	COG3753	Protein conserved in bacteria
CEJ98_RS11325	COG0542	response to heat
CEJ98_RS11330	COG1959	2 iron, 2 sulfur cluster binding
CEJ98_RS11345	COG0314	molybdopterin synthase activity
CEJ98_RS11350	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
CEJ98_RS11370	COG0436	Aminotransferase
CEJ98_RS11380	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
CEJ98_RS11390	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CEJ98_RS11395	COG0463	Glycosyl transferase, family 2
CEJ98_RS11405	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CEJ98_RS11405	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CEJ98_RS11410	COG0726	polysaccharide deacetylase
CEJ98_RS11415	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
CEJ98_RS11425	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
CEJ98_RS11430	COG0791	NLP P60 protein
CEJ98_RS11435	COG1414	Transcriptional regulator
CEJ98_RS11440	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CEJ98_RS11445	COG0765	amino acid transport
CEJ98_RS11450	COG1126	abc transporter atp-binding protein
CEJ98_RS11455	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CEJ98_RS11460	COG0306	phosphate transporter
CEJ98_RS11490	COG0360	Binds together with S18 to 16S ribosomal RNA
CEJ98_RS11495	COG0583	DNA-binding transcription factor activity
CEJ98_RS11500	COG3960	tartronate-semialdehyde synthase activity
CEJ98_RS11505	COG3622	Belongs to the hyi family
CEJ98_RS11510	COG2084	Dehydrogenase
CEJ98_RS11515	COG0252	asparaginase activity
CEJ98_RS11535	COG0438	transferase activity, transferring glycosyl groups
CEJ98_RS11540	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CEJ98_RS11560	COG0084	hydrolase, TatD family'
CEJ98_RS11570	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CEJ98_RS11575	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CEJ98_RS11590	COG2153	protein acetylation
CEJ98_RS11600	COG2130	NADP-dependent
CEJ98_RS11610	COG0183	Belongs to the thiolase family
CEJ98_RS11615	COG1335	isochorismatase
CEJ98_RS11620	COG1024	Enoyl-CoA hydratase
CEJ98_RS11620	COG1250	3-hydroxyacyl-CoA dehydrogenase
CEJ98_RS11625	COG0318	PFAM AMP-dependent synthetase and ligase
CEJ98_RS11635	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CEJ98_RS11650	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CEJ98_RS11670	COG0129	dihydroxy-acid dehydratase activity
CEJ98_RS11675	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CEJ98_RS11675	COG0047	phosphoribosylformylglycinamidine synthase activity
CEJ98_RS11680	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CEJ98_RS11695	COG4181	ATPase activity
CEJ98_RS11705	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CEJ98_RS11725	COG0776	regulation of translation
CEJ98_RS11730	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
CEJ98_RS11745	COG0544	peptidyl-prolyl cis-trans isomerase activity
CEJ98_RS11750	COG1929	Belongs to the glycerate kinase type-1 family
CEJ98_RS11760	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CEJ98_RS11780	COG1609	Transcriptional regulator
CEJ98_RS11785	COG1879	ABC-type sugar transport system periplasmic component
CEJ98_RS11790	COG1129	ABC transporter
CEJ98_RS11795	COG1172	Belongs to the binding-protein-dependent transport system permease family
CEJ98_RS11800	COG1172	Belongs to the binding-protein-dependent transport system permease family
CEJ98_RS11850	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
CEJ98_RS11855	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CEJ98_RS11890	COG1970	mechanosensitive ion channel activity
CEJ98_RS11905	COG3360	Dodecin
CEJ98_RS11925	COG2351	hydroxyisourate hydrolase activity
CEJ98_RS11935	COG0110	maltose O-acetyltransferase activity
CEJ98_RS11945	COG4266	Belongs to the allantoicase family
CEJ98_RS11950	COG3195	allantoin biosynthetic process
CEJ98_RS11950	COG3648	Uricase
CEJ98_RS11965	COG1953	Uracil, thiamine, allantoin
CEJ98_RS11975	COG1619	proteins homologs of microcin C7 resistance protein MccF
CEJ98_RS11990	COG0667	Aldo Keto reductase
CEJ98_RS12005	COG4221	oxidoreductase activity
CEJ98_RS12020	COG1733	regulation of RNA biosynthetic process
CEJ98_RS12030	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
CEJ98_RS12035	COG4221	oxidoreductase activity
CEJ98_RS12045	COG1309	transcriptional regulator
CEJ98_RS12050	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CEJ98_RS12060	COG1396	sequence-specific DNA binding
CEJ98_RS12065	COG0583	DNA-binding transcription factor activity
CEJ98_RS12070	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CEJ98_RS12075	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CEJ98_RS12080	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS12085	COG1309	transcriptional regulator
CEJ98_RS12090	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
CEJ98_RS12100	COG0583	DNA-binding transcription factor activity
CEJ98_RS12105	COG1902	pentaerythritol trinitrate reductase activity
CEJ98_RS12130	COG1027	Aspartate ammonia-lyase
CEJ98_RS12140	COG2271	Major facilitator Superfamily
CEJ98_RS12150	COG1126	abc transporter atp-binding protein
CEJ98_RS12155	COG0765	amino acid transport
CEJ98_RS12160	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CEJ98_RS12165	COG0384	phenazine biosynthesis protein PhzF
CEJ98_RS12195	COG3210	domain, Protein
CEJ98_RS12200	COG0667	Aldo Keto reductase
CEJ98_RS12230	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS12245	COG2207	Transcriptional regulator
CEJ98_RS12255	COG1573	uracil-dna glycosylase
CEJ98_RS12270	COG2207	Transcriptional regulator
CEJ98_RS12285	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CEJ98_RS12290	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CEJ98_RS12295	COG4771	TonB-dependent receptor
CEJ98_RS12300	COG0519	Catalyzes the synthesis of GMP from XMP
CEJ98_RS12300	COG0518	GMP synthase (glutamine-hydrolyzing) activity
CEJ98_RS12315	COG0697	spore germination
CEJ98_RS12335	COG0330	HflC and HflK could
CEJ98_RS12350	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
CEJ98_RS12355	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CEJ98_RS12365	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CEJ98_RS12375	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CEJ98_RS12380	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CEJ98_RS12395	COG0750	zinc metalloprotease
CEJ98_RS12410	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CEJ98_RS12415	COG0233	cytoplasmic translational termination
CEJ98_RS12435	COG0024	Methionine aminopeptidase
CEJ98_RS12450	COG0242	peptide deformylase activity
CEJ98_RS12485	COG1393	Belongs to the ArsC family
CEJ98_RS12495	COG2890	protein-(glutamine-N5) methyltransferase activity
CEJ98_RS12505	COG0386	Belongs to the glutathione peroxidase family
CEJ98_RS12510	COG0488	(ABC) transporter
CEJ98_RS12530	COG0477	Major facilitator Superfamily
CEJ98_RS12535	COG0351	phosphomethylpyrimidine kinase
CEJ98_RS12545	COG1573	uracil-dna glycosylase
CEJ98_RS12555	COG1214	PFAM Peptidase M22, glycoprotease
CEJ98_RS12565	COG0513	Belongs to the DEAD box helicase family
CEJ98_RS12570	COG2224	Isocitrate lyase
CEJ98_RS12580	COG0583	DNA-binding transcription factor activity
CEJ98_RS12590	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
CEJ98_RS12655	COG1752	Esterase of the alpha-beta hydrolase superfamily
CEJ98_RS12660	COG0791	NLP P60 protein
CEJ98_RS12665	COG4172	Belongs to the ABC transporter superfamily
CEJ98_RS12670	COG4239	(ABC) transporter, permease
CEJ98_RS12675	COG4174	ABC transporter (Permease)
CEJ98_RS12680	COG4166	transmembrane transport
CEJ98_RS12700	COG1397	ADP-ribosylglycohydrolase
CEJ98_RS12730	COG0583	DNA-binding transcription factor activity
CEJ98_RS12740	COG2197	response regulator
CEJ98_RS12750	COG2205	protein histidine kinase activity
CEJ98_RS12750	COG0784	Response regulator, receiver
CEJ98_RS12755	COG2916	Histone family protein nucleoid-structuring protein H-NS
CEJ98_RS12760	COG2197	response regulator
CEJ98_RS12775	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CEJ98_RS12795	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CEJ98_RS12815	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS12830	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CEJ98_RS12865	COG0667	Aldo Keto reductase
CEJ98_RS12885	COG0583	DNA-binding transcription factor activity
CEJ98_RS12890	COG2801	Transposase and inactivated derivatives
CEJ98_RS12925	COG0642	Histidine kinase
CEJ98_RS12960	COG1181	Belongs to the D-alanine--D-alanine ligase family
CEJ98_RS12965	COG4974	Belongs to the 'phage' integrase family
CEJ98_RS12990	COG1475	DNA binding
CEJ98_RS13040	COG2755	lipolytic protein G-D-S-L family
CEJ98_RS13040	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
CEJ98_RS13050	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
CEJ98_RS13055	COG0277	FAD linked oxidase domain protein
CEJ98_RS13075	COG2205	protein histidine kinase activity
CEJ98_RS13075	COG0784	Response regulator, receiver
CEJ98_RS13085	COG0683	leucine binding
CEJ98_RS13110	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CEJ98_RS13120	COG2706	6-phosphogluconolactonase activity
CEJ98_RS13125	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
CEJ98_RS13135	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
CEJ98_RS13155	COG1024	Enoyl-CoA hydratase
CEJ98_RS13170	COG1250	3-hydroxyacyl-CoA dehydrogenase
CEJ98_RS13175	COG2986	histidine ammonia-lyase
CEJ98_RS13190	COG1174	glycine betaine transport
CEJ98_RS13200	COG4584	PFAM Integrase catalytic
CEJ98_RS13200	COG2390	Transcriptional regulator
CEJ98_RS13235	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS13245	COG4336	lyase activity
CEJ98_RS13255	COG0848	biopolymer transport protein
CEJ98_RS13260	COG0811	peptide transport
CEJ98_RS13270	COG1012	belongs to the aldehyde dehydrogenase family
CEJ98_RS13275	COG0626	cystathionine gamma-synthase activity
CEJ98_RS13280	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS13285	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CEJ98_RS13290	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CEJ98_RS13300	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CEJ98_RS13320	COG0823	Involved in the tonB-independent uptake of proteins
CEJ98_RS13325	COG0583	DNA-binding transcription factor activity
CEJ98_RS13330	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS13335	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
CEJ98_RS13355	COG0683	leucine binding
CEJ98_RS13400	COG2086	electron transfer activity
CEJ98_RS13410	COG0583	DNA-binding transcription factor activity
CEJ98_RS13415	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CEJ98_RS13420	COG4638	Rieske (2fe-2S)
CEJ98_RS13425	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CEJ98_RS13435	COG1448	Aminotransferase
CEJ98_RS13450	COG0404	The glycine cleavage system catalyzes the degradation of glycine
CEJ98_RS13450	COG0446	pyridine nucleotide-disulphide oxidoreductase
CEJ98_RS13460	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CEJ98_RS13470	COG1309	transcriptional regulator
CEJ98_RS13480	COG1012	belongs to the aldehyde dehydrogenase family
CEJ98_RS13495	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CEJ98_RS13525	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS13530	COG1063	alcohol dehydrogenase
CEJ98_RS13545	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
CEJ98_RS13555	COG3265	gluconokinase activity
CEJ98_RS13565	COG0436	Aminotransferase
CEJ98_RS13575	COG0583	DNA-binding transcription factor activity
CEJ98_RS13585	COG0300	oxidoreductase activity
CEJ98_RS13615	COG0559	Belongs to the binding-protein-dependent transport system permease family
CEJ98_RS13640	COG0179	Fumarylacetoacetate (FAA) hydrolase
CEJ98_RS13675	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CEJ98_RS13680	COG1960	acyl-CoA dehydrogenase activity
CEJ98_RS13690	COG2814	Major facilitator Superfamily
CEJ98_RS13700	COG3485	protocatechuate 3,4-dioxygenase
CEJ98_RS13725	COG0179	Fumarylacetoacetate (FAA) hydrolase
CEJ98_RS13735	COG0402	S-adenosylhomocysteine deaminase activity
CEJ98_RS13740	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CEJ98_RS13780	COG0667	Aldo Keto reductase
CEJ98_RS13785	COG1472	Belongs to the glycosyl hydrolase 3 family
CEJ98_RS13815	COG1609	Transcriptional regulator
CEJ98_RS13825	COG2423	ornithine cyclodeaminase activity
CEJ98_RS13850	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CEJ98_RS13865	COG2205	protein histidine kinase activity
CEJ98_RS13875	COG0840	transmembrane signaling receptor activity
CEJ98_RS13880	COG0179	Fumarylacetoacetate (FAA) hydrolase
CEJ98_RS13900	COG2814	Major facilitator Superfamily
CEJ98_RS13910	COG0179	Fumarylacetoacetate (FAA) hydrolase
CEJ98_RS13915	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CEJ98_RS13960	COG2814	Major facilitator Superfamily
CEJ98_RS13965	COG0235	Class ii aldolase
CEJ98_RS14005	COG1595	DNA-templated transcription, initiation
CEJ98_RS14015	COG0312	modulator of DNA gyrase
CEJ98_RS14020	COG0312	modulator of DNA gyrase
CEJ98_RS14025	COG3118	belongs to the thioredoxin family
CEJ98_RS14030	COG4178	(ABC) transporter
CEJ98_RS14055	COG1522	sequence-specific DNA binding
CEJ98_RS14065	COG0730	response to heat
CEJ98_RS14160	COG1051	belongs to the nudix hydrolase family
CEJ98_RS14185	COG1104	cysteine desulfurase activity
CEJ98_RS14190	COG4974	Belongs to the 'phage' integrase family
CEJ98_RS14205	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
CEJ98_RS14210	COG1609	Transcriptional regulator
CEJ98_RS14260	COG3505	Type IV secretory pathway VirD4
CEJ98_RS14350	COG0154	amidase activity
CEJ98_RS14390	COG0154	amidase activity
CEJ98_RS14395	COG1802	Transcriptional regulator
CEJ98_RS14405	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CEJ98_RS14420	COG0318	PFAM AMP-dependent synthetase and ligase
CEJ98_RS14450	COG2771	luxR family
CEJ98_RS14455	COG3916	Acyl-homoserine-lactone synthase
CEJ98_RS14475	COG3328	transposase activity
CEJ98_RS14500	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CEJ98_RS14505	COG1136	(ABC) transporter
CEJ98_RS14505	COG0577	efflux transmembrane transporter activity
CEJ98_RS14535	COG0527	aspartate kinase activity
CEJ98_RS14545	COG0037	tRNA processing
CEJ98_RS14570	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CEJ98_RS14580	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CEJ98_RS14585	COG1045	serine acetyltransferase
CEJ98_RS14595	COG0483	inositol monophosphate 1-phosphatase activity
CEJ98_RS14620	COG1335	isochorismatase
CEJ98_RS14625	COG3845	ABC transporter
CEJ98_RS14630	COG1335	isochorismatase
CEJ98_RS14640	COG1802	Transcriptional regulator
CEJ98_RS14655	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
CEJ98_RS14660	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS14665	COG1414	Transcriptional regulator
CEJ98_RS14725	COG0784	Response regulator, receiver
CEJ98_RS14725	COG2205	protein histidine kinase activity
CEJ98_RS14725	COG2198	Histidine kinase
CEJ98_RS14735	COG1309	transcriptional regulator
CEJ98_RS14740	COG1252	NADH dehydrogenase
CEJ98_RS14750	COG0583	DNA-binding transcription factor activity
CEJ98_RS14760	COG0583	DNA-binding transcription factor activity
CEJ98_RS14765	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
CEJ98_RS14770	COG0511	ligase activity, forming carbon-carbon bonds
CEJ98_RS14775	COG0439	Biotin carboxylase
CEJ98_RS14785	COG1984	allophanate hydrolase subunit 2
CEJ98_RS14800	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
CEJ98_RS14835	COG4221	oxidoreductase activity
CEJ98_RS14880	COG1403	HNH endonuclease
CEJ98_RS15130	COG2850	peptidyl-arginine hydroxylation
CEJ98_RS15145	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
CEJ98_RS15150	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
CEJ98_RS15155	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CEJ98_RS15165	COG0180	Tryptophanyl-tRNA synthetase
CEJ98_RS15170	COG1994	Peptidase M50
CEJ98_RS15175	COG0009	L-threonylcarbamoyladenylate synthase
CEJ98_RS15180	COG0613	PHP domain protein
CEJ98_RS15185	COG0596	Alpha beta hydrolase
CEJ98_RS15190	COG2833	Protein of unknown function (DUF455)
CEJ98_RS15200	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
CEJ98_RS15210	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
CEJ98_RS15220	COG2877	3-deoxy-8-phosphooctulonate synthase activity
CEJ98_RS15225	COG0504	CTP synthase activity
CEJ98_RS15230	COG2267	carboxylic ester hydrolase activity
CEJ98_RS15240	COG0084	hydrolase, TatD family'
CEJ98_RS15260	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
CEJ98_RS15280	COG2975	iron-sulfur cluster assembly
CEJ98_RS15285	COG0633	Ferredoxin
CEJ98_RS15295	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
CEJ98_RS15300	COG0316	Belongs to the HesB IscA family
CEJ98_RS15305	COG0822	iron-sulfur transferase activity
CEJ98_RS15310	COG1104	cysteine desulfurase activity
CEJ98_RS15320	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CEJ98_RS15340	COG1414	Transcriptional regulator
CEJ98_RS15345	COG1686	Belongs to the peptidase S11 family
CEJ98_RS15355	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CEJ98_RS15360	COG0508	dehydrogenase complex catalyzes the overall conversion of
CEJ98_RS15365	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
CEJ98_RS15375	COG4566	intracellular signal transduction
CEJ98_RS15380	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
CEJ98_RS15385	COG0339	signal peptide processing
CEJ98_RS15390	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CEJ98_RS15400	COG1794	racemase activity, acting on amino acids and derivatives
CEJ98_RS15415	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CEJ98_RS15420	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
CEJ98_RS15425	COG1595	DNA-templated transcription, initiation
CEJ98_RS15465	COG3852	Histidine kinase
CEJ98_RS15470	COG0174	glutamine synthetase
CEJ98_RS15480	COG1058	Belongs to the CinA family
CEJ98_RS15480	COG1546	Belongs to the CinA family
CEJ98_RS15500	COG1643	Atp-dependent helicase
CEJ98_RS15505	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
CEJ98_RS15505	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
CEJ98_RS15530	COG0174	glutamine synthetase
CEJ98_RS15535	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
CEJ98_RS15545	COG1917	Cupin 2, conserved barrel domain protein
CEJ98_RS15545	COG1396	sequence-specific DNA binding
CEJ98_RS15550	COG1012	belongs to the aldehyde dehydrogenase family
CEJ98_RS15575	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
CEJ98_RS15600	COG0415	Belongs to the DNA photolyase family
CEJ98_RS15630	COG2207	Transcriptional regulator
CEJ98_RS15640	COG0222	ribosome binding
CEJ98_RS15670	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CEJ98_RS15705	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
CEJ98_RS15755	COG3193	protein, possibly involved in utilization of glycolate and propanediol
CEJ98_RS15765	COG0672	)-iron permease
CEJ98_RS15770	COG4633	Protein conserved in bacteria
CEJ98_RS15780	COG0556	nucleotide-excision repair
CEJ98_RS15790	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS15795	COG0667	Aldo Keto reductase
CEJ98_RS15800	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
CEJ98_RS15815	COG0789	Transcriptional regulator
CEJ98_RS15865	COG2866	Carboxypeptidase
CEJ98_RS15870	COG3022	response to hydroperoxide
CEJ98_RS15880	COG0436	Aminotransferase
CEJ98_RS15885	COG0625	glutathione transferase activity
CEJ98_RS15900	COG3642	lipopolysaccharide core region biosynthetic process
CEJ98_RS15905	COG1960	acyl-CoA dehydrogenase activity
CEJ98_RS15925	COG1960	acyl-CoA dehydrogenase activity
CEJ98_RS15945	COG1007	ATP synthesis coupled electron transport
CEJ98_RS15980	COG1034	ATP synthesis coupled electron transport
CEJ98_RS15990	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
CEJ98_RS16000	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CEJ98_RS16010	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CEJ98_RS16025	COG0149	triose-phosphate isomerase activity
CEJ98_RS16030	COG3321	synthase
CEJ98_RS16030	COG4221	oxidoreductase activity
CEJ98_RS16030	COG0604	alcohol dehydrogenase
CEJ98_RS16030	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CEJ98_RS16035	COG1185	polyribonucleotide nucleotidyltransferase activity
CEJ98_RS16045	COG0683	leucine binding
CEJ98_RS16055	COG0288	reversible hydration of carbon dioxide
CEJ98_RS16060	COG0659	secondary active sulfate transmembrane transporter activity
CEJ98_RS16075	COG1183	phosphatidylcholine synthase activity
CEJ98_RS16085	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
CEJ98_RS16095	COG0028	Belongs to the TPP enzyme family
CEJ98_RS16125	COG0438	transferase activity, transferring glycosyl groups
CEJ98_RS16145	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS16180	COG0745	RESPONSE REGULATOR receiver
CEJ98_RS16185	COG2205	protein histidine kinase activity
CEJ98_RS16190	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
CEJ98_RS16195	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
CEJ98_RS16200	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
CEJ98_RS16235	COG0217	transcriptional regulatory protein
CEJ98_RS16240	COG0151	Belongs to the GarS family
CEJ98_RS16255	COG0799	negative regulation of ribosome biogenesis
CEJ98_RS16260	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
CEJ98_RS16275	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CEJ98_RS16290	COG1285	pathogenesis
CEJ98_RS16305	COG0583	DNA-binding transcription factor activity
CEJ98_RS16310	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
CEJ98_RS16315	COG2159	amidohydrolase
CEJ98_RS16340	COG2814	Major facilitator Superfamily
CEJ98_RS16425	COG1196	nuclear chromosome segregation
CEJ98_RS16425	COG0739	heme binding
CEJ98_RS16425	COG0741	lytic transglycosylase activity
CEJ98_RS16620	COG0582	viral genome integration into host DNA
CEJ98_RS16645	COG0859	PFAM glycosyl transferase family 9
CEJ98_RS16655	COG1054	Belongs to the UPF0176 family
CEJ98_RS16660	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CEJ98_RS16665	COG0513	Belongs to the DEAD box helicase family
CEJ98_RS16670	COG3895	Periplasmic Protein
CEJ98_RS16685	COG1674	ftsk spoiiie
CEJ98_RS16685	COG1674	ftsk spoiiie
CEJ98_RS16690	COG2706	6-phosphogluconolactonase activity
CEJ98_RS16695	COG3387	PFAM Glycoside hydrolase 15-related
CEJ98_RS16705	COG1309	transcriptional regulator
CEJ98_RS16710	COG2878	Part of a membrane complex involved in electron transport
CEJ98_RS16715	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CEJ98_RS16750	COG3135	benzoate transporter
CEJ98_RS16755	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CEJ98_RS16805	COG0697	spore germination
CEJ98_RS16810	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CEJ98_RS16820	COG0384	phenazine biosynthesis protein PhzF
CEJ98_RS16850	COG0488	(ABC) transporter
CEJ98_RS16870	COG0582	viral genome integration into host DNA
CEJ98_RS16930	COG0358	DNA primase activity
CEJ98_RS16995	COG4574	serine-type endopeptidase inhibitor activity
CEJ98_RS17015	COG1881	PFAM PEBP family protein
CEJ98_RS17020	COG2814	Major facilitator Superfamily
CEJ98_RS17025	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
CEJ98_RS17060	COG1116	anion transmembrane transporter activity
CEJ98_RS17065	COG1176	ABC-type spermidine putrescine transport system, permease component I
CEJ98_RS17095	COG4215	(ABC) transporter
CEJ98_RS17110	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CEJ98_RS17115	COG0347	Belongs to the P(II) protein family
CEJ98_RS17130	COG2827	Endonuclease containing a URI domain
CEJ98_RS17135	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
CEJ98_RS17150	COG2271	Major facilitator Superfamily
CEJ98_RS17165	COG0181	hydroxymethylbilane synthase activity
CEJ98_RS17180	COG0165	Argininosuccinate lyase
CEJ98_RS17185	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CEJ98_RS17215	COG0489	protein tyrosine kinase activity
CEJ98_RS17220	COG2885	chlorophyll binding
CEJ98_RS17225	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CEJ98_RS17225	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CEJ98_RS17245	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
CEJ98_RS17250	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
CEJ98_RS17265	COG2259	Doxx family
CEJ98_RS17270	COG1492	cobalamin metabolic process
CEJ98_RS17290	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CEJ98_RS17300	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
CEJ98_RS17305	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
CEJ98_RS17310	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
CEJ98_RS17315	COG4139	cobalamin transport
CEJ98_RS17320	COG4206	TonB-dependent receptor
CEJ98_RS17355	COG0583	DNA-binding transcription factor activity
CEJ98_RS17380	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
CEJ98_RS17385	COG0795	lipopolysaccharide-transporting ATPase activity
CEJ98_RS17400	COG1648	precorrin-2 dehydrogenase activity
CEJ98_RS17400	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
CEJ98_RS17405	COG2895	sulfate adenylyltransferase (ATP) activity
CEJ98_RS17415	COG0175	sulfate reduction
CEJ98_RS17430	COG0583	DNA-binding transcription factor activity
CEJ98_RS17445	COG0582	viral genome integration into host DNA
CEJ98_RS17550	COG0583	DNA-binding transcription factor activity
CEJ98_RS17555	COG1187	pseudouridine synthase activity
CEJ98_RS17570	COG0543	2 iron, 2 sulfur cluster binding
CEJ98_RS17570	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CEJ98_RS17575	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CEJ98_RS17580	COG0456	acetyltransferase
CEJ98_RS17610	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
CEJ98_RS17615	COG1047	Peptidyl-prolyl cis-trans
CEJ98_RS17630	COG0267	Belongs to the bacterial ribosomal protein bL33 family
CEJ98_RS17635	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
CEJ98_RS17655	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
CEJ98_RS17655	COG3264	Mechanosensitive ion channel
CEJ98_RS17660	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CEJ98_RS17660	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CEJ98_RS17665	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CEJ98_RS17670	COG0196	riboflavin kinase activity
CEJ98_RS17675	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
CEJ98_RS17690	COG0756	dUTP diphosphatase activity
CEJ98_RS17695	COG0542	response to heat
CEJ98_RS17705	COG1278	Cold shock
CEJ98_RS17715	COG0745	RESPONSE REGULATOR receiver
CEJ98_RS17735	COG2198	Histidine kinase
CEJ98_RS17735	COG0643	Histidine kinase
CEJ98_RS17785	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
CEJ98_RS17790	COG0656	L-ascorbic acid biosynthetic process
CEJ98_RS17795	COG2188	Transcriptional regulator
CEJ98_RS17810	COG2814	Major facilitator Superfamily
CEJ98_RS17820	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CEJ98_RS17840	COG2207	Transcriptional regulator
CEJ98_RS17855	COG1570	exodeoxyribonuclease VII activity
CEJ98_RS17860	COG1663	tetraacyldisaccharide 4'-kinase activity
CEJ98_RS17870	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
CEJ98_RS17890	COG0728	peptidoglycan biosynthetic process
CEJ98_RS17905	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CEJ98_RS17920	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
CEJ98_RS17925	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CEJ98_RS17930	COG0318	PFAM AMP-dependent synthetase and ligase
CEJ98_RS17935	COG4974	Belongs to the 'phage' integrase family
CEJ98_RS17945	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CEJ98_RS17950	COG0802	atpase or kinase
CEJ98_RS17955	COG0860	N-Acetylmuramoyl-L-alanine amidase
CEJ98_RS17960	COG0697	spore germination
CEJ98_RS17965	COG1741	Belongs to the pirin family
CEJ98_RS17975	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
CEJ98_RS17980	COG0259	pyridoxamine-phosphate oxidase activity
CEJ98_RS17985	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CEJ98_RS17995	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CEJ98_RS18000	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CEJ98_RS18005	COG1522	sequence-specific DNA binding
CEJ98_RS18035	COG0246	Mannitol dehydrogenase
CEJ98_RS18040	COG1070	Carbohydrate kinase
CEJ98_RS18045	COG2390	Transcriptional regulator
CEJ98_RS18050	COG3842	ATPase activity
CEJ98_RS18055	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CEJ98_RS18065	COG4209	transmembrane transport
CEJ98_RS18080	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CEJ98_RS18090	COG0735	belongs to the Fur family
CEJ98_RS18100	COG1120	ATPase activity
CEJ98_RS18105	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CEJ98_RS18110	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
CEJ98_RS18120	COG2233	PERMEase
CEJ98_RS18130	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CEJ98_RS18135	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CEJ98_RS18155	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CEJ98_RS18170	COG2027	D-alanyl-D-alanine carboxypeptidase
CEJ98_RS18185	COG0702	epimerase
CEJ98_RS18190	COG0009	L-threonylcarbamoyladenylate synthase
CEJ98_RS18195	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CEJ98_RS18200	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CEJ98_RS18205	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
CEJ98_RS18215	COG0469	pyruvate kinase activity
CEJ98_RS18220	COG0126	phosphoglycerate kinase activity
CEJ98_RS18250	COG0429	hydrolase of the alpha beta-hydrolase fold
CEJ98_RS18260	COG4783	chaperone-mediated protein folding
CEJ98_RS18265	COG0315	cyclic pyranopterin monophosphate synthase activity
CEJ98_RS18270	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CEJ98_RS18290	COG4969	Belongs to the N-Me-Phe pilin family
CEJ98_RS18295	COG0861	Integral membrane protein TerC family
CEJ98_RS18300	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CEJ98_RS18315	COG2137	regulation of response to DNA damage stimulus
CEJ98_RS18320	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
CEJ98_RS18360	COG0840	transmembrane signaling receptor activity
CEJ98_RS18370	COG0436	Aminotransferase
CEJ98_RS18420	COG2207	Transcriptional regulator
CEJ98_RS18430	COG2814	Major facilitator Superfamily
CEJ98_RS18455	COG1732	Glycine betaine
CEJ98_RS18475	COG0583	DNA-binding transcription factor activity
CEJ98_RS18515	COG2186	Transcriptional regulator
CEJ98_RS18520	COG4948	Mandelate Racemase Muconate Lactonizing
CEJ98_RS18540	COG0513	Belongs to the DEAD box helicase family
CEJ98_RS18575	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CEJ98_RS18580	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CEJ98_RS18585	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CEJ98_RS18600	COG1702	phosphate starvation-inducible protein PhoH
CEJ98_RS18610	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
CEJ98_RS18620	COG0815	Transfers the fatty acyl group on membrane lipoproteins
CEJ98_RS18630	COG0752	glycyl-tRNA synthetase alpha subunit
CEJ98_RS18635	COG0751	glycine-tRNA ligase activity
CEJ98_RS18640	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
CEJ98_RS18645	COG0204	Acyl-transferase
CEJ98_RS18665	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
CEJ98_RS18685	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
CEJ98_RS18690	COG5265	(ABC) transporter
CEJ98_RS18695	COG1607	acyl-coa hydrolase
CEJ98_RS18705	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
CEJ98_RS18710	COG1024	Enoyl-CoA hydratase
CEJ98_RS18715	COG0183	Belongs to the thiolase family
CEJ98_RS18720	COG1250	3-hydroxyacyl-CoA dehydrogenase
CEJ98_RS18720	COG1024	Enoyl-CoA hydratase
CEJ98_RS18725	COG1960	acyl-CoA dehydrogenase activity
CEJ98_RS18740	COG0494	nUDIX hydrolase
CEJ98_RS18750	COG0583	DNA-binding transcription factor activity
CEJ98_RS18790	COG2226	methyltransferase
CEJ98_RS18815	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CEJ98_RS18825	COG0251	oxidation-reduction process
CEJ98_RS18830	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
CEJ98_RS18855	COG0477	Major facilitator Superfamily
CEJ98_RS18880	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CEJ98_RS18885	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS18890	COG0583	DNA-binding transcription factor activity
CEJ98_RS18895	COG2814	Major facilitator Superfamily
CEJ98_RS18900	COG1566	PFAM secretion protein HlyD family protein
CEJ98_RS18920	COG0583	DNA-binding transcription factor activity
CEJ98_RS18935	COG3397	chitin binding
CEJ98_RS18940	COG2985	domain, Protein
CEJ98_RS18960	COG2801	Transposase and inactivated derivatives
CEJ98_RS19000	COG0629	single-stranded DNA binding
CEJ98_RS19005	COG2814	Major facilitator Superfamily
CEJ98_RS19030	COG1280	lysine exporter protein (LysE YggA)
CEJ98_RS19035	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CEJ98_RS19050	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
CEJ98_RS19065	COG1137	ATPase activity
CEJ98_RS19070	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
CEJ98_RS19075	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CEJ98_RS19100	COG1194	a g-specific adenine glycosylase
CEJ98_RS19130	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CEJ98_RS19150	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
CEJ98_RS19160	COG0742	ribosomal rna small subunit methyltransferase
CEJ98_RS19170	COG0625	glutathione transferase activity
CEJ98_RS19175	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CEJ98_RS19180	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CEJ98_RS19195	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CEJ98_RS19210	COG1294	oxidase, subunit
CEJ98_RS19220	COG1263	PTS System
CEJ98_RS19220	COG2190	(PTS) system
CEJ98_RS19220	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CEJ98_RS19225	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
CEJ98_RS19225	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CEJ98_RS19230	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CEJ98_RS19235	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CEJ98_RS19250	COG0587	DNA-directed DNA polymerase activity
CEJ98_RS19275	COG1999	signal sequence binding
CEJ98_RS19285	COG1612	heme a metabolic process
CEJ98_RS19315	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
CEJ98_RS19325	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CEJ98_RS19340	COG2226	methyltransferase
CEJ98_RS19345	COG1040	competence protein
CEJ98_RS19350	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
CEJ98_RS19355	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
CEJ98_RS19360	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
CEJ98_RS19375	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CEJ98_RS19380	COG0588	phosphoglycerate mutase activity
CEJ98_RS19385	COG0793	Belongs to the peptidase S41A family
CEJ98_RS19390	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CEJ98_RS19395	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CEJ98_RS19400	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CEJ98_RS19410	COG0189	ligase activity
CEJ98_RS19420	COG0004	ammonium transporteR
CEJ98_RS19430	COG2960	long-chain fatty acid transporting porin activity
CEJ98_RS19435	COG0606	chelatase, subunit chli
CEJ98_RS19440	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
CEJ98_RS19510	COG4191	Histidine kinase
CEJ98_RS19520	COG1960	acyl-CoA dehydrogenase activity
CEJ98_RS19525	COG1960	acyl-CoA dehydrogenase activity
CEJ98_RS19535	COG0583	DNA-binding transcription factor activity
CEJ98_RS19540	COG0405	Gamma-glutamyltransferase
CEJ98_RS19550	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CEJ98_RS19560	COG4521	taurine ABC transporter
CEJ98_RS19580	COG0583	DNA-binding transcription factor activity
CEJ98_RS19585	COG2921	Belongs to the UPF0250 family
CEJ98_RS19595	COG1686	Belongs to the peptidase S11 family
CEJ98_RS19605	COG3411	Ferredoxin
CEJ98_RS19625	COG1127	ABC transporter
CEJ98_RS19630	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
CEJ98_RS19635	COG0737	Belongs to the 5'-nucleotidase family
CEJ98_RS19695	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
CEJ98_RS19715	COG1024	Enoyl-CoA hydratase
CEJ98_RS19765	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CEJ98_RS19775	COG0747	negative chemotaxis
CEJ98_RS19785	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
CEJ98_RS19790	COG0288	reversible hydration of carbon dioxide
CEJ98_RS19795	COG0183	Belongs to the thiolase family
CEJ98_RS19800	COG0300	oxidoreductase activity
CEJ98_RS19805	COG3012	SEC-C Motif Domain Protein
CEJ98_RS19820	COG0156	8-amino-7-oxononanoate synthase activity
CEJ98_RS19825	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
CEJ98_RS19830	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
CEJ98_RS19840	COG2200	EAL domain
CEJ98_RS19840	COG2199	diguanylate cyclase activity
CEJ98_RS19845	COG0025	NhaP-type Na H and K H
CEJ98_RS19855	COG0640	Transcriptional regulator
CEJ98_RS19860	COG0798	PFAM Bile acid sodium symporter
CEJ98_RS19870	COG0431	NADPH-dependent FMN reductase
CEJ98_RS19875	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
CEJ98_RS19880	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CEJ98_RS19900	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CEJ98_RS19925	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS19930	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS19935	COG0596	Alpha beta hydrolase
CEJ98_RS19945	COG0583	DNA-binding transcription factor activity
CEJ98_RS19970	COG1609	Transcriptional regulator
CEJ98_RS20020	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CEJ98_RS20045	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CEJ98_RS20050	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CEJ98_RS20105	COG2271	Major facilitator Superfamily
CEJ98_RS20115	COG0583	DNA-binding transcription factor activity
CEJ98_RS20130	COG4638	Rieske (2fe-2S)
CEJ98_RS20160	COG0183	Belongs to the thiolase family
CEJ98_RS20180	COG0137	argininosuccinate synthase activity
CEJ98_RS20195	COG0745	RESPONSE REGULATOR receiver
CEJ98_RS20215	COG2207	Transcriptional regulator
CEJ98_RS20220	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS20235	COG0745	RESPONSE REGULATOR receiver
CEJ98_RS20240	COG2205	protein histidine kinase activity
CEJ98_RS20270	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CEJ98_RS20295	COG2233	PERMEase
CEJ98_RS20310	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
CEJ98_RS20320	COG1706	bacterial-type flagellum-dependent cell motility
CEJ98_RS20345	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
CEJ98_RS20350	COG1558	bacterial-type flagellum-dependent cell motility
CEJ98_RS20355	COG1815	bacterial-type flagellum-dependent cell motility
CEJ98_RS20395	COG0741	lytic transglycosylase activity
CEJ98_RS20400	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CEJ98_RS20410	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
CEJ98_RS20415	COG1984	allophanate hydrolase subunit 2
CEJ98_RS20430	COG4608	Belongs to the ABC transporter superfamily
CEJ98_RS20435	COG0444	Belongs to the ABC transporter superfamily
CEJ98_RS20440	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CEJ98_RS20445	COG0601	transmembrane transport
CEJ98_RS20450	COG0747	negative chemotaxis
CEJ98_RS20465	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
CEJ98_RS20475	COG3568	Endonuclease Exonuclease Phosphatase
CEJ98_RS20495	COG0531	amino acid
CEJ98_RS20505	COG0457	Tetratricopeptide repeat
CEJ98_RS20505	COG0705	Rhomboid family
CEJ98_RS20510	COG2257	FlhB HrpN YscU SpaS Family
CEJ98_RS20550	COG1157	protein secretion by the type III secretion system
CEJ98_RS20570	COG1960	acyl-CoA dehydrogenase activity
CEJ98_RS20580	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CEJ98_RS20590	COG2814	Major facilitator Superfamily
CEJ98_RS20605	COG0667	Aldo Keto reductase
CEJ98_RS20630	COG1560	Kdo2-lipid A biosynthetic process
CEJ98_RS20635	COG3093	addiction module antidote protein HigA
CEJ98_RS20655	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
CEJ98_RS20660	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
CEJ98_RS20665	COG0523	cobalamin synthesis protein
CEJ98_RS20680	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
CEJ98_RS20685	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
CEJ98_RS20710	COG1309	transcriptional regulator
CEJ98_RS20720	COG2813	Specifically methylates the guanine in position
CEJ98_RS20720	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CEJ98_RS20725	COG2814	Major facilitator Superfamily
CEJ98_RS20735	COG2207	Transcriptional regulator
CEJ98_RS20740	COG1064	alcohol dehydrogenase
CEJ98_RS20745	COG0708	Exodeoxyribonuclease III
CEJ98_RS20750	COG2326	polyphosphate kinase activity
CEJ98_RS20760	COG0154	amidase activity
CEJ98_RS20770	COG1077	Cell shape determining protein MreB Mrl
CEJ98_RS20785	COG0768	penicillin binding
CEJ98_RS20790	COG0772	Belongs to the SEDS family
CEJ98_RS20800	COG0720	synthase
CEJ98_RS20805	COG0602	queuosine metabolic process
CEJ98_RS20820	COG2204	response regulator
CEJ98_RS20825	COG5000	phosphorelay sensor kinase activity
CEJ98_RS20865	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CEJ98_RS20870	COG0242	peptide deformylase activity
CEJ98_RS20875	COG0758	DNA mediated transformation
CEJ98_RS20890	COG0583	DNA-binding transcription factor activity
CEJ98_RS20895	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CEJ98_RS20920	COG0732	type I restriction modification DNA specificity domain
CEJ98_RS20955	COG2169	Transcriptional regulator
CEJ98_RS20955	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CEJ98_RS20980	COG0583	DNA-binding transcription factor activity
CEJ98_RS21005	COG0745	RESPONSE REGULATOR receiver
CEJ98_RS21010	COG2205	protein histidine kinase activity
CEJ98_RS21025	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CEJ98_RS21035	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
CEJ98_RS21045	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CEJ98_RS21135	COG2186	Transcriptional regulator
CEJ98_RS21140	COG2721	sulfolactate sulfo-lyase activity
CEJ98_RS21150	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CEJ98_RS21155	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CEJ98_RS21160	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CEJ98_RS21180	COG1012	belongs to the aldehyde dehydrogenase family
CEJ98_RS21185	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CEJ98_RS21190	COG2267	carboxylic ester hydrolase activity
CEJ98_RS21200	COG4175	Glycine betaine
CEJ98_RS21205	COG4176	ABC-type proline glycine betaine transport system permease component
CEJ98_RS21210	COG2113	Glycine betaine
CEJ98_RS21220	COG1012	belongs to the aldehyde dehydrogenase family
CEJ98_RS21225	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CEJ98_RS21230	COG1522	sequence-specific DNA binding
CEJ98_RS21255	COG2271	Major facilitator Superfamily
CEJ98_RS21260	COG1802	Transcriptional regulator
CEJ98_RS21265	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CEJ98_RS21285	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CEJ98_RS21290	COG2271	Major facilitator Superfamily
CEJ98_RS21295	COG0179	Fumarylacetoacetate (FAA) hydrolase
CEJ98_RS21305	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CEJ98_RS21325	COG1132	(ABC) transporter
CEJ98_RS21325	COG2375	cellular response to nickel ion
CEJ98_RS21330	COG0583	DNA-binding transcription factor activity
CEJ98_RS21340	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS21350	COG3246	L-lysine catabolic process to acetate
CEJ98_RS21360	COG0583	DNA-binding transcription factor activity
CEJ98_RS21365	COG1012	belongs to the aldehyde dehydrogenase family
CEJ98_RS21380	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
CEJ98_RS21435	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS21480	COG2226	methyltransferase
CEJ98_RS21490	COG1960	acyl-CoA dehydrogenase activity
CEJ98_RS21500	COG0318	PFAM AMP-dependent synthetase and ligase
CEJ98_RS21565	COG0318	PFAM AMP-dependent synthetase and ligase
CEJ98_RS21570	COG0583	DNA-binding transcription factor activity
CEJ98_RS21580	COG1487	ribonuclease activity
CEJ98_RS21585	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
CEJ98_RS21590	COG1349	DNA-binding transcription factor activity
CEJ98_RS21600	COG0738	Major facilitator superfamily
CEJ98_RS21605	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CEJ98_RS21625	COG1301	dicarboxylic acid transport
CEJ98_RS21635	COG3038	cytochrome b561
CEJ98_RS21640	COG0642	Histidine kinase
CEJ98_RS21665	COG2203	Gaf domain
CEJ98_RS21665	COG3706	GGDEF domain
CEJ98_RS21665	COG4251	negative regulation of phosphorylation
CEJ98_RS21665	COG5001	Diguanylate cyclase
CEJ98_RS21670	COG0840	transmembrane signaling receptor activity
CEJ98_RS21675	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CEJ98_RS21690	COG0596	Alpha beta hydrolase
CEJ98_RS21705	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CEJ98_RS21715	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS21725	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CEJ98_RS21730	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CEJ98_RS21735	COG0583	DNA-binding transcription factor activity
CEJ98_RS21745	COG1301	dicarboxylic acid transport
CEJ98_RS21765	COG3608	succinylglutamate desuccinylase aspartoacylase
CEJ98_RS21775	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CEJ98_RS21785	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CEJ98_RS21790	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CEJ98_RS21795	COG1126	abc transporter atp-binding protein
CEJ98_RS21810	COG3511	phospholipase C
CEJ98_RS21820	COG3618	amidohydrolase
CEJ98_RS21825	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CEJ98_RS21830	COG1609	Transcriptional regulator
CEJ98_RS21835	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
CEJ98_RS21840	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
CEJ98_RS21845	COG0840	transmembrane signaling receptor activity
CEJ98_RS21855	COG1609	Transcriptional regulator
CEJ98_RS21865	COG1172	Belongs to the binding-protein-dependent transport system permease family
CEJ98_RS21870	COG1879	ABC-type sugar transport system periplasmic component
CEJ98_RS21885	COG3121	Chaperone
CEJ98_RS21900	COG3539	Fimbrial protein
CEJ98_RS21905	COG2814	Major facilitator Superfamily
CEJ98_RS21915	COG4191	Histidine kinase
CEJ98_RS21925	COG4566	intracellular signal transduction
CEJ98_RS21970	COG0596	Alpha beta hydrolase
CEJ98_RS21990	COG2814	Major facilitator Superfamily
CEJ98_RS22005	COG2207	Transcriptional regulator
CEJ98_RS22020	COG0583	DNA-binding transcription factor activity
CEJ98_RS22045	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CEJ98_RS22050	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CEJ98_RS22090	COG2186	Transcriptional regulator
CEJ98_RS22105	COG1454	alcohol dehydrogenase
CEJ98_RS22110	COG3485	protocatechuate 3,4-dioxygenase
CEJ98_RS22115	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CEJ98_RS22120	COG1012	belongs to the aldehyde dehydrogenase family
CEJ98_RS22130	COG3038	cytochrome b561
CEJ98_RS22145	COG4772	TonB-dependent receptor
CEJ98_RS22165	COG1012	belongs to the aldehyde dehydrogenase family
CEJ98_RS22180	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CEJ98_RS22190	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CEJ98_RS22200	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
CEJ98_RS22220	COG3038	cytochrome b561
CEJ98_RS22235	COG2814	Major facilitator Superfamily
CEJ98_RS22240	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
CEJ98_RS22265	COG2188	Transcriptional regulator
CEJ98_RS22280	COG1053	succinate dehydrogenase
CEJ98_RS22285	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CEJ98_RS22290	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
CEJ98_RS22295	COG0372	Belongs to the citrate synthase family
CEJ98_RS22340	COG0473	3-isopropylmalate dehydrogenase activity
CEJ98_RS22370	COG0133	tryptophan synthase activity
CEJ98_RS22385	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
CEJ98_RS22390	COG0285	dihydrofolate synthase activity
CEJ98_RS22415	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CEJ98_RS22420	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
CEJ98_RS22425	COG2755	lipolytic protein G-D-S-L family
CEJ98_RS22425	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
CEJ98_RS22440	COG0438	transferase activity, transferring glycosyl groups
CEJ98_RS22455	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CEJ98_RS22465	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CEJ98_RS22470	COG1295	ribonuclease BN
CEJ98_RS22475	COG3608	succinylglutamate desuccinylase aspartoacylase
CEJ98_RS22480	COG0243	molybdopterin cofactor binding
CEJ98_RS22480	COG3383	formate dehydrogenase (NAD+) activity
CEJ98_RS22485	COG0243	molybdopterin cofactor binding
CEJ98_RS22485	COG3383	formate dehydrogenase (NAD+) activity
CEJ98_RS22490	COG0437	4 iron, 4 sulfur cluster binding
CEJ98_RS22495	COG2864	formate dehydrogenase
CEJ98_RS22510	COG3276	selenocysteine insertion sequence binding
CEJ98_RS22535	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS22540	COG0583	DNA-binding transcription factor activity
CEJ98_RS22555	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CEJ98_RS22560	COG1309	transcriptional regulator
CEJ98_RS22570	COG0493	'glutamate synthase
CEJ98_RS22580	COG1953	Uracil, thiamine, allantoin
CEJ98_RS22595	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CEJ98_RS22600	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
CEJ98_RS22615	COG0295	cytidine deaminase activity
CEJ98_RS22625	COG1309	transcriptional regulator
CEJ98_RS22640	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CEJ98_RS22645	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CEJ98_RS22710	COG2031	fatty acid transporter
CEJ98_RS22715	COG1309	transcriptional regulator
CEJ98_RS22765	COG1846	Transcriptional regulator
CEJ98_RS22775	COG1764	response to oxidative stress
CEJ98_RS22785	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
CEJ98_RS22815	COG0583	DNA-binding transcription factor activity
CEJ98_RS22820	COG1902	pentaerythritol trinitrate reductase activity
CEJ98_RS22830	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS22845	COG2916	Histone family protein nucleoid-structuring protein H-NS
CEJ98_RS22860	COG2204	response regulator
CEJ98_RS22900	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CEJ98_RS22905	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
CEJ98_RS22945	COG1215	transferase activity, transferring glycosyl groups
CEJ98_RS22950	COG0110	maltose O-acetyltransferase activity
CEJ98_RS22975	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CEJ98_RS23020	COG0513	Belongs to the DEAD box helicase family
CEJ98_RS23030	COG0583	DNA-binding transcription factor activity
CEJ98_RS23045	COG0066	3-isopropylmalate dehydratase activity
CEJ98_RS23050	COG1301	dicarboxylic acid transport
CEJ98_RS23055	COG0477	Major facilitator Superfamily
CEJ98_RS23090	COG0583	DNA-binding transcription factor activity
CEJ98_RS23095	COG0840	transmembrane signaling receptor activity
CEJ98_RS23115	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
CEJ98_RS23135	COG1120	ATPase activity
CEJ98_RS23140	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
CEJ98_RS23145	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CEJ98_RS23175	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CEJ98_RS23175	COG1116	anion transmembrane transporter activity
CEJ98_RS23180	COG3707	response regulator
CEJ98_RS23195	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CEJ98_RS23200	COG2146	nitrite reductase [NAD(P)H] activity
CEJ98_RS23210	COG0405	Gamma-glutamyltransferase
CEJ98_RS23235	COG0778	Nitroreductase
CEJ98_RS23240	COG0735	belongs to the Fur family
CEJ98_RS23245	COG2366	antibiotic biosynthetic process
CEJ98_RS23250	COG0420	3'-5' exonuclease activity
CEJ98_RS23260	COG1960	acyl-CoA dehydrogenase activity
CEJ98_RS23265	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CEJ98_RS23275	COG0251	oxidation-reduction process
CEJ98_RS23285	COG2175	clavaminate synthase activity
CEJ98_RS23300	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CEJ98_RS23305	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CEJ98_RS23315	COG1129	ABC transporter
CEJ98_RS23320	COG1172	Belongs to the binding-protein-dependent transport system permease family
CEJ98_RS23330	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CEJ98_RS23355	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
CEJ98_RS23360	COG2188	Transcriptional regulator
CEJ98_RS23370	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CEJ98_RS23375	COG2267	carboxylic ester hydrolase activity
CEJ98_RS23395	COG0346	lactoylglutathione lyase activity
CEJ98_RS23400	COG0512	Glutamine amidotransferase of anthranilate synthase
CEJ98_RS23400	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CEJ98_RS23425	COG1289	transmembrane transporter activity
CEJ98_RS23440	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CEJ98_RS23445	COG0765	amino acid transport
CEJ98_RS23450	COG0765	amino acid transport
CEJ98_RS23470	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CEJ98_RS23480	COG1090	epimerase
CEJ98_RS23515	COG0252	asparaginase activity
CEJ98_RS23530	COG0667	Aldo Keto reductase
CEJ98_RS23550	COG0583	DNA-binding transcription factor activity
CEJ98_RS23555	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CEJ98_RS23610	COG0667	Aldo Keto reductase
CEJ98_RS23625	COG0235	Class ii aldolase
CEJ98_RS23635	COG0583	DNA-binding transcription factor activity
CEJ98_RS23640	COG0546	phosphoglycolate phosphatase activity
CEJ98_RS23645	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
CEJ98_RS23645	COG2755	lipolytic protein G-D-S-L family
CEJ98_RS23655	COG3842	ATPase activity
CEJ98_RS23660	COG1176	ABC-type spermidine putrescine transport system, permease component I
CEJ98_RS23665	COG1177	transmembrane transport
CEJ98_RS23695	COG0583	DNA-binding transcription factor activity
CEJ98_RS23705	COG0300	oxidoreductase activity
CEJ98_RS23730	COG2271	Major facilitator Superfamily
CEJ98_RS23745	COG2188	Transcriptional regulator
CEJ98_RS23765	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CEJ98_RS23770	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CEJ98_RS23795	COG1228	amidohydrolase
CEJ98_RS23805	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CEJ98_RS23825	COG1172	Belongs to the binding-protein-dependent transport system permease family
CEJ98_RS23830	COG1172	Belongs to the binding-protein-dependent transport system permease family
CEJ98_RS23835	COG1129	ABC transporter
CEJ98_RS23840	COG1879	ABC-type sugar transport system periplasmic component
CEJ98_RS23880	COG3220	belongs to the UPF0276 family
CEJ98_RS23890	COG3321	synthase
CEJ98_RS23890	COG0604	alcohol dehydrogenase
CEJ98_RS23895	COG0583	DNA-binding transcription factor activity
CEJ98_RS23900	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CEJ98_RS23915	COG0596	Alpha beta hydrolase
CEJ98_RS23930	COG1024	Enoyl-CoA hydratase
CEJ98_RS23935	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CEJ98_RS23940	COG1960	acyl-CoA dehydrogenase activity
CEJ98_RS23995	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
CEJ98_RS24000	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CEJ98_RS24005	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
CEJ98_RS24015	COG2175	clavaminate synthase activity
CEJ98_RS24020	COG3634	alkyl hydroperoxide reductase activity
CEJ98_RS24055	COG1464	Belongs to the NlpA lipoprotein family
CEJ98_RS24060	COG1262	PFAM Formylglycine-generating sulfatase enzyme
CEJ98_RS24075	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS24090	COG0840	transmembrane signaling receptor activity
CEJ98_RS24140	COG2271	Major facilitator Superfamily
CEJ98_RS24145	COG1012	belongs to the aldehyde dehydrogenase family
CEJ98_RS24160	COG0583	DNA-binding transcription factor activity
CEJ98_RS24165	COG2252	PERMEase
CEJ98_RS24170	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
CEJ98_RS24195	COG1309	transcriptional regulator
CEJ98_RS24200	COG0300	oxidoreductase activity
CEJ98_RS24210	COG0477	Major facilitator Superfamily
CEJ98_RS24215	COG1414	Transcriptional regulator
CEJ98_RS24280	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CEJ98_RS24315	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CEJ98_RS24320	COG1686	Belongs to the peptidase S11 family
CEJ98_RS24340	COG0318	PFAM AMP-dependent synthetase and ligase
CEJ98_RS24360	COG1538	Outer membrane efflux protein
CEJ98_RS24370	COG0642	Histidine kinase
CEJ98_RS24415	COG4251	negative regulation of phosphorylation
CEJ98_RS24415	COG3706	GGDEF domain
CEJ98_RS24415	COG5001	Diguanylate cyclase
CEJ98_RS24415	COG2203	Gaf domain
CEJ98_RS24420	COG0583	DNA-binding transcription factor activity
CEJ98_RS24425	COG3485	protocatechuate 3,4-dioxygenase
CEJ98_RS24430	COG3485	protocatechuate 3,4-dioxygenase
CEJ98_RS24485	COG1538	Outer membrane efflux protein
CEJ98_RS24495	COG1309	transcriptional regulator
CEJ98_RS24505	COG0179	Fumarylacetoacetate (FAA) hydrolase
CEJ98_RS24530	COG0387	Pfam Sodium calcium exchanger
CEJ98_RS24535	COG0583	DNA-binding transcription factor activity
CEJ98_RS24560	COG0583	DNA-binding transcription factor activity
CEJ98_RS24565	COG1473	amidohydrolase
CEJ98_RS24575	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CEJ98_RS24580	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CEJ98_RS24585	COG2373	Large extracellular alpha-helical protein
CEJ98_RS24590	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CEJ98_RS24605	COG1012	belongs to the aldehyde dehydrogenase family
CEJ98_RS24610	COG2916	Histone family protein nucleoid-structuring protein H-NS
CEJ98_RS24620	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
CEJ98_RS24625	COG0028	Belongs to the TPP enzyme family
CEJ98_RS24655	COG4585	Histidine kinase
CEJ98_RS24660	COG2197	response regulator
CEJ98_RS24695	COG3511	phospholipase C
CEJ98_RS24705	COG1214	PFAM Peptidase M22, glycoprotease
CEJ98_RS24705	COG0456	acetyltransferase
CEJ98_RS24750	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS24760	COG0583	DNA-binding transcription factor activity
CEJ98_RS24770	COG4993	Dehydrogenase
CEJ98_RS24775	COG1294	oxidase, subunit
CEJ98_RS24780	COG1271	oxidase subunit
CEJ98_RS24785	COG0038	chloride channel
CEJ98_RS24810	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CEJ98_RS24815	COG0583	DNA-binding transcription factor activity
CEJ98_RS24850	COG0402	S-adenosylhomocysteine deaminase activity
CEJ98_RS24860	COG0583	DNA-binding transcription factor activity
CEJ98_RS24900	COG0583	DNA-binding transcription factor activity
CEJ98_RS24905	COG0235	Class ii aldolase
CEJ98_RS24915	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
CEJ98_RS24965	COG2226	methyltransferase
CEJ98_RS25005	COG0028	Belongs to the TPP enzyme family
CEJ98_RS25005	COG4032	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
CEJ98_RS25035	COG1272	protein, Hemolysin III
CEJ98_RS25045	COG0583	DNA-binding transcription factor activity
CEJ98_RS25050	COG1280	lysine exporter protein (LysE YggA)
CEJ98_RS25055	COG0693	protein deglycase activity
CEJ98_RS25060	COG0583	DNA-binding transcription factor activity
CEJ98_RS25065	COG0477	Major facilitator Superfamily
CEJ98_RS25080	COG3530	Putative quorum-sensing-regulated virulence factor
CEJ98_RS25090	COG1305	Transglutaminase-like
CEJ98_RS25120	COG2308	Evidence 4 Homologs of previously reported genes of
CEJ98_RS25125	COG0778	Nitroreductase
CEJ98_RS25135	COG2855	membrane
CEJ98_RS25145	COG0778	Nitroreductase
CEJ98_RS25150	COG3318	Belongs to the UPF0149 family
CEJ98_RS25150	COG3012	SEC-C Motif Domain Protein
CEJ98_RS25155	COG3739	integral membrane protein
CEJ98_RS25160	COG0450	alkyl hydroperoxide reductase
CEJ98_RS25165	COG3634	alkyl hydroperoxide reductase activity
CEJ98_RS25185	COG2207	Transcriptional regulator
CEJ98_RS25200	COG1116	anion transmembrane transporter activity
CEJ98_RS25205	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CEJ98_RS25210	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CEJ98_RS25215	COG1063	alcohol dehydrogenase
CEJ98_RS25220	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS25230	COG1522	sequence-specific DNA binding
CEJ98_RS25290	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
CEJ98_RS25295	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CEJ98_RS25310	COG2271	Major facilitator Superfamily
CEJ98_RS25325	COG1404	Belongs to the peptidase S8 family
CEJ98_RS25350	COG3468	outer membrane autotransporter barrel domain protein
CEJ98_RS25370	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CEJ98_RS25375	COG0583	DNA-binding transcription factor activity
CEJ98_RS25400	COG1335	isochorismatase
CEJ98_RS25405	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CEJ98_RS25420	COG0583	DNA-binding transcription factor activity
CEJ98_RS25425	COG0625	glutathione transferase activity
CEJ98_RS25430	COG0625	glutathione transferase activity
CEJ98_RS25445	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CEJ98_RS25450	COG0243	molybdopterin cofactor binding
CEJ98_RS25455	COG3781	membrane
CEJ98_RS25590	COG1222	aaa ATPase
CEJ98_RS25610	COG0601	transmembrane transport
CEJ98_RS25615	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CEJ98_RS25640	COG0583	DNA-binding transcription factor activity
CEJ98_RS25650	COG4942	peptidase
CEJ98_RS25650	COG1388	LysM domain
CEJ98_RS25675	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CEJ98_RS25685	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CEJ98_RS25700	COG0668	transmembrane transport
CEJ98_RS25710	COG2807	transmembrane transport
CEJ98_RS25725	COG1914	H( )-stimulated, divalent metal cation uptake system
CEJ98_RS25755	COG2207	Transcriptional regulator
CEJ98_RS25770	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CEJ98_RS25780	COG3713	MltA-interacting MipA family protein
CEJ98_RS25835	COG0789	Transcriptional regulator
CEJ98_RS25840	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CEJ98_RS25845	COG0659	secondary active sulfate transmembrane transporter activity
CEJ98_RS25855	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CEJ98_RS25865	COG2706	6-phosphogluconolactonase activity
CEJ98_RS25885	COG2721	sulfolactate sulfo-lyase activity
CEJ98_RS25925	COG2271	Major facilitator Superfamily
CEJ98_RS25940	COG1940	carbohydrate kinase activity
CEJ98_RS25945	COG0531	amino acid
CEJ98_RS25950	COG1940	carbohydrate kinase activity
CEJ98_RS25960	COG0583	DNA-binding transcription factor activity
CEJ98_RS25980	COG0596	Alpha beta hydrolase
CEJ98_RS25995	COG0235	Class ii aldolase
CEJ98_RS26000	COG1942	4-Oxalocrotonate Tautomerase
CEJ98_RS26005	COG1280	lysine exporter protein (LysE YggA)
CEJ98_RS26020	COG0583	DNA-binding transcription factor activity
CEJ98_RS26025	COG2162	N-hydroxyarylamine O-acetyltransferase activity
CEJ98_RS26055	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
CEJ98_RS26055	COG0546	phosphoglycolate phosphatase activity
CEJ98_RS26075	COG0477	Major facilitator Superfamily
CEJ98_RS26090	COG1012	belongs to the aldehyde dehydrogenase family
CEJ98_RS26100	COG0028	Belongs to the TPP enzyme family
CEJ98_RS26105	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS26110	COG1414	Transcriptional regulator
CEJ98_RS26140	COG2146	nitrite reductase [NAD(P)H] activity
CEJ98_RS26150	COG1414	Transcriptional regulator
CEJ98_RS26175	COG2271	Major facilitator Superfamily
CEJ98_RS26180	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CEJ98_RS26185	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CEJ98_RS26195	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CEJ98_RS26200	COG2239	Acts as a magnesium transporter
CEJ98_RS26225	COG0477	Major facilitator Superfamily
CEJ98_RS26235	COG0583	DNA-binding transcription factor activity
CEJ98_RS26240	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS26250	COG2205	protein histidine kinase activity
CEJ98_RS26255	COG0745	RESPONSE REGULATOR receiver
CEJ98_RS26300	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CEJ98_RS26315	COG2165	general secretion pathway protein
CEJ98_RS26345	COG3188	usher protein
CEJ98_RS26355	COG2197	response regulator
CEJ98_RS26370	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
CEJ98_RS26440	COG1902	pentaerythritol trinitrate reductase activity
CEJ98_RS26445	COG3670	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
CEJ98_RS26450	COG0281	malic enzyme
CEJ98_RS26450	COG0280	phosphate acetyltransferase
CEJ98_RS26460	COG0662	Cupin 2, conserved barrel domain protein
CEJ98_RS26470	COG0540	Belongs to the ATCase OTCase family
CEJ98_RS26515	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CEJ98_RS26515	COG4651	solute:proton antiporter activity
CEJ98_RS26540	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CEJ98_RS26550	COG1120	ATPase activity
CEJ98_RS26610	COG3712	iron ion homeostasis
CEJ98_RS26615	COG1595	DNA-templated transcription, initiation
CEJ98_RS26625	COG0765	amino acid transport
CEJ98_RS26630	COG0765	amino acid transport
CEJ98_RS26635	COG1126	abc transporter atp-binding protein
CEJ98_RS26650	COG1999	signal sequence binding
CEJ98_RS26665	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CEJ98_RS26670	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CEJ98_RS26680	COG1120	ATPase activity
CEJ98_RS26685	COG0251	oxidation-reduction process
CEJ98_RS26690	COG4774	siderophore transport
CEJ98_RS26710	COG4774	siderophore transport
CEJ98_RS26715	COG0154	amidase activity
CEJ98_RS26730	COG0583	DNA-binding transcription factor activity
CEJ98_RS26735	COG3842	ATPase activity
CEJ98_RS26775	COG0583	DNA-binding transcription factor activity
CEJ98_RS26800	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CEJ98_RS26805	COG2271	Major facilitator Superfamily
CEJ98_RS26810	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CEJ98_RS26815	COG1609	Transcriptional regulator
CEJ98_RS26825	COG0625	glutathione transferase activity
CEJ98_RS26850	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CEJ98_RS26855	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
CEJ98_RS26895	COG1739	Uncharacterized protein family UPF0029
CEJ98_RS26900	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CEJ98_RS26935	COG0583	DNA-binding transcription factor activity
CEJ98_RS26965	COG0436	Aminotransferase
CEJ98_RS26975	COG0583	DNA-binding transcription factor activity
CEJ98_RS26980	COG2916	Histone family protein nucleoid-structuring protein H-NS
CEJ98_RS26990	COG0531	amino acid
CEJ98_RS27005	COG1201	RNA secondary structure unwinding
CEJ98_RS27030	COG1309	transcriptional regulator
CEJ98_RS27035	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
CEJ98_RS27065	COG2205	protein histidine kinase activity
CEJ98_RS27070	COG0745	RESPONSE REGULATOR receiver
CEJ98_RS27075	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CEJ98_RS27085	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CEJ98_RS27090	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CEJ98_RS27125	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS27130	COG0179	Fumarylacetoacetate (FAA) hydrolase
CEJ98_RS27140	COG0129	dihydroxy-acid dehydratase activity
CEJ98_RS27145	COG3093	addiction module antidote protein HigA
CEJ98_RS27155	COG1609	Transcriptional regulator
CEJ98_RS27165	COG0366	Alpha amylase catalytic
CEJ98_RS27170	COG0366	Alpha amylase catalytic
CEJ98_RS27185	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
CEJ98_RS27190	COG1640	4-alpha-glucanotransferase
CEJ98_RS27200	COG1513	Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide
CEJ98_RS27220	COG1522	sequence-specific DNA binding
CEJ98_RS27260	COG0583	DNA-binding transcription factor activity
CEJ98_RS27265	COG0583	DNA-binding transcription factor activity
CEJ98_RS27280	COG2271	Major facilitator Superfamily
CEJ98_RS27325	COG0625	glutathione transferase activity
CEJ98_RS27340	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS27340	COG3321	synthase
CEJ98_RS27340	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CEJ98_RS27340	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CEJ98_RS27340	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CEJ98_RS27345	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CEJ98_RS27345	COG4221	oxidoreductase activity
CEJ98_RS27345	COG3321	synthase
CEJ98_RS27345	COG0300	oxidoreductase activity
CEJ98_RS27350	COG3321	synthase
CEJ98_RS27350	COG0300	oxidoreductase activity
CEJ98_RS27350	COG4221	oxidoreductase activity
CEJ98_RS27350	COG3321	synthase
CEJ98_RS27350	COG4221	oxidoreductase activity
CEJ98_RS27350	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CEJ98_RS27350	COG0300	oxidoreductase activity
CEJ98_RS27350	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CEJ98_RS27355	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CEJ98_RS27355	COG3321	synthase
CEJ98_RS27355	COG4221	oxidoreductase activity
CEJ98_RS27355	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS27360	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CEJ98_RS27360	COG4221	oxidoreductase activity
CEJ98_RS27360	COG3321	synthase
CEJ98_RS27360	COG0300	oxidoreductase activity
CEJ98_RS27365	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CEJ98_RS27365	COG0300	oxidoreductase activity
CEJ98_RS27365	COG3321	synthase
CEJ98_RS27365	COG4221	oxidoreductase activity
CEJ98_RS27370	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS27370	COG3321	synthase
CEJ98_RS27370	COG3321	synthase
CEJ98_RS27370	COG4221	oxidoreductase activity
CEJ98_RS27370	COG4221	oxidoreductase activity
CEJ98_RS27370	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS27370	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CEJ98_RS27370	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CEJ98_RS27380	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
CEJ98_RS27395	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CEJ98_RS27400	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CEJ98_RS27405	COG3425	synthase
CEJ98_RS27410	COG1024	Enoyl-CoA hydratase
CEJ98_RS27415	COG1024	Enoyl-CoA hydratase
CEJ98_RS27430	COG0154	amidase activity
CEJ98_RS27450	COG0534	Mate efflux family protein
CEJ98_RS27455	COG1024	Enoyl-CoA hydratase
CEJ98_RS27460	COG1024	Enoyl-CoA hydratase
CEJ98_RS27475	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CEJ98_RS27480	COG1960	acyl-CoA dehydrogenase activity
CEJ98_RS27500	COG2252	PERMEase
CEJ98_RS27515	COG3284	Transcriptional regulator
CEJ98_RS27525	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CEJ98_RS27550	COG0657	acetylesterase activity
CEJ98_RS27560	COG1250	3-hydroxyacyl-CoA dehydrogenase
CEJ98_RS27565	COG3246	L-lysine catabolic process to acetate
CEJ98_RS27575	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CEJ98_RS27610	COG0583	DNA-binding transcription factor activity
CEJ98_RS27630	COG3119	arylsulfatase activity
CEJ98_RS27680	COG1733	regulation of RNA biosynthetic process
CEJ98_RS27685	COG0702	epimerase
CEJ98_RS27690	COG3706	GGDEF domain
CEJ98_RS27695	COG0840	transmembrane signaling receptor activity
CEJ98_RS27710	COG2200	EAL domain
CEJ98_RS27720	COG1846	Transcriptional regulator
CEJ98_RS27735	COG2204	response regulator
CEJ98_RS27750	COG3284	Transcriptional regulator
CEJ98_RS27755	COG1012	belongs to the aldehyde dehydrogenase family
CEJ98_RS27760	COG1454	alcohol dehydrogenase
CEJ98_RS27765	COG2721	sulfolactate sulfo-lyase activity
CEJ98_RS27770	COG0246	Mannitol dehydrogenase
CEJ98_RS27775	COG1063	alcohol dehydrogenase
CEJ98_RS27790	COG1172	Belongs to the binding-protein-dependent transport system permease family
CEJ98_RS27805	COG2059	Chromate
CEJ98_RS27810	COG0583	DNA-binding transcription factor activity
CEJ98_RS27820	COG1473	amidohydrolase
CEJ98_RS27835	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CEJ98_RS27850	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CEJ98_RS27860	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CEJ98_RS27865	COG0601	transmembrane transport
CEJ98_RS27875	COG0840	transmembrane signaling receptor activity
CEJ98_RS27890	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CEJ98_RS27900	COG1522	sequence-specific DNA binding
CEJ98_RS27910	COG0459	protein refolding
CEJ98_RS27925	COG0567	Dehydrogenase, E1 component
CEJ98_RS27935	COG2916	Histone family protein nucleoid-structuring protein H-NS
CEJ98_RS27945	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CEJ98_RS27965	COG0517	IMP dehydrogenase activity
CEJ98_RS27965	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
CEJ98_RS27975	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
CEJ98_RS27980	COG2877	3-deoxy-8-phosphooctulonate synthase activity
CEJ98_RS27995	COG1045	serine acetyltransferase
CEJ98_RS28010	COG0489	protein tyrosine kinase activity
CEJ98_RS28010	COG3206	protein involved in exopolysaccharide biosynthesis
CEJ98_RS28020	COG1596	polysaccharide export
CEJ98_RS28030	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CEJ98_RS28030	COG2207	Transcriptional regulator
CEJ98_RS28035	COG0840	transmembrane signaling receptor activity
CEJ98_RS28040	COG1349	DNA-binding transcription factor activity
CEJ98_RS28055	COG3842	ATPase activity
CEJ98_RS28060	COG4208	sulfate ABC transporter
CEJ98_RS28095	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
CEJ98_RS28100	COG0247	lactate metabolic process
CEJ98_RS28100	COG2181	nitrate reductase activity
CEJ98_RS28105	COG0446	pyridine nucleotide-disulphide oxidoreductase
CEJ98_RS28105	COG1902	pentaerythritol trinitrate reductase activity
CEJ98_RS28140	COG2814	Major facilitator Superfamily
CEJ98_RS28170	COG2814	Major facilitator Superfamily
CEJ98_RS28190	COG1012	belongs to the aldehyde dehydrogenase family
CEJ98_RS28210	COG0583	DNA-binding transcription factor activity
CEJ98_RS28220	COG1131	(ABC) transporter
CEJ98_RS28225	COG0842	Transport permease protein
CEJ98_RS28235	COG2814	Major facilitator Superfamily
CEJ98_RS28240	COG2706	6-phosphogluconolactonase activity
CEJ98_RS28255	COG2140	Oxalate decarboxylase
CEJ98_RS28260	COG1914	H( )-stimulated, divalent metal cation uptake system
CEJ98_RS28300	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CEJ98_RS28305	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CEJ98_RS28340	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
CEJ98_RS28360	COG2267	carboxylic ester hydrolase activity
CEJ98_RS28365	COG0747	negative chemotaxis
CEJ98_RS28375	COG2271	Major facilitator Superfamily
CEJ98_RS28385	COG2186	Transcriptional regulator
CEJ98_RS28400	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CEJ98_RS28410	COG0625	glutathione transferase activity
CEJ98_RS28465	COG1760	l-serine dehydratase
CEJ98_RS28485	COG1802	Transcriptional regulator
CEJ98_RS28545	COG1566	PFAM secretion protein HlyD family protein
CEJ98_RS28550	COG1609	Transcriptional regulator
CEJ98_RS28575	COG0395	ABC-type sugar transport system, permease component
CEJ98_RS28585	COG1396	sequence-specific DNA binding
CEJ98_RS28595	COG3238	Protein conserved in bacteria
CEJ98_RS28605	COG2186	Transcriptional regulator
CEJ98_RS28610	COG2084	Dehydrogenase
CEJ98_RS28615	COG3395	kinase activity
CEJ98_RS28620	COG0235	Class ii aldolase
CEJ98_RS28625	COG2271	Major facilitator Superfamily
CEJ98_RS28630	COG3622	Belongs to the hyi family
CEJ98_RS28635	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CEJ98_RS28665	COG0477	Major facilitator Superfamily
CEJ98_RS28695	COG4175	Glycine betaine
CEJ98_RS28700	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
CEJ98_RS28735	COG5295	Hep Hag repeat protein
CEJ98_RS28735	COG5295	Hep Hag repeat protein
CEJ98_RS28755	COG0583	DNA-binding transcription factor activity
CEJ98_RS28760	COG0667	Aldo Keto reductase
CEJ98_RS28765	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS28770	COG2207	Transcriptional regulator
CEJ98_RS28810	COG2271	Major facilitator Superfamily
CEJ98_RS28815	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CEJ98_RS28815	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CEJ98_RS28820	COG1105	Belongs to the carbohydrate kinase PfkB family
CEJ98_RS28825	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CEJ98_RS28825	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
CEJ98_RS28830	COG1609	Transcriptional regulator
CEJ98_RS28835	COG1012	belongs to the aldehyde dehydrogenase family
CEJ98_RS28840	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CEJ98_RS28905	COG0154	amidase activity
CEJ98_RS28920	COG0583	DNA-binding transcription factor activity
CEJ98_RS28940	COG1280	lysine exporter protein (LysE YggA)
CEJ98_RS28945	COG1522	sequence-specific DNA binding
CEJ98_RS28960	COG0477	Major facilitator Superfamily
CEJ98_RS28965	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CEJ98_RS28970	COG0697	spore germination
CEJ98_RS28975	COG0306	phosphate transporter
CEJ98_RS28985	COG2814	Major facilitator Superfamily
CEJ98_RS29055	COG2271	Major facilitator Superfamily
CEJ98_RS29060	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CEJ98_RS29065	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
CEJ98_RS29095	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CEJ98_RS29115	COG2259	Doxx family
CEJ98_RS29125	COG2721	sulfolactate sulfo-lyase activity
CEJ98_RS29140	COG1012	belongs to the aldehyde dehydrogenase family
CEJ98_RS29145	COG2223	nitrite transmembrane transporter activity
CEJ98_RS29150	COG4948	Mandelate Racemase Muconate Lactonizing
CEJ98_RS29160	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CEJ98_RS29180	COG2271	Major facilitator Superfamily
CEJ98_RS29210	COG2132	Multicopper oxidase
CEJ98_RS29235	COG4774	siderophore transport
CEJ98_RS29265	COG0642	Histidine kinase
CEJ98_RS29295	COG1172	Belongs to the binding-protein-dependent transport system permease family
CEJ98_RS29340	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CEJ98_RS29345	COG0657	acetylesterase activity
CEJ98_RS29350	COG0583	DNA-binding transcription factor activity
CEJ98_RS29355	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
CEJ98_RS29360	COG0531	amino acid
CEJ98_RS29365	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CEJ98_RS29390	COG1522	sequence-specific DNA binding
CEJ98_RS29395	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CEJ98_RS29400	COG3657	addiction module killer protein
CEJ98_RS29425	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CEJ98_RS29430	COG1012	belongs to the aldehyde dehydrogenase family
CEJ98_RS29440	COG0840	transmembrane signaling receptor activity
CEJ98_RS29445	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CEJ98_RS29455	COG0183	Belongs to the thiolase family
CEJ98_RS29460	COG1414	Transcriptional regulator
CEJ98_RS29475	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CEJ98_RS29480	COG0667	Aldo Keto reductase
CEJ98_RS29485	COG0583	DNA-binding transcription factor activity
CEJ98_RS29505	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CEJ98_RS29545	COG0583	DNA-binding transcription factor activity
CEJ98_RS29565	COG0583	DNA-binding transcription factor activity
CEJ98_RS29600	COG2814	Major facilitator Superfamily
CEJ98_RS29605	COG0583	DNA-binding transcription factor activity
CEJ98_RS29615	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS29620	COG0400	carboxylic ester hydrolase activity
CEJ98_RS29660	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CEJ98_RS29680	COG2072	flavoprotein involved in K transport
CEJ98_RS29695	COG2144	transferase activity, transferring acyl groups
CEJ98_RS29720	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CEJ98_RS29725	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
CEJ98_RS29730	COG1845	cytochrome c oxidase, subunit III
CEJ98_RS29735	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CEJ98_RS29740	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
CEJ98_RS29745	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CEJ98_RS29755	COG0583	DNA-binding transcription factor activity
CEJ98_RS29760	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CEJ98_RS29765	COG2271	Major facilitator Superfamily
CEJ98_RS29770	COG0583	DNA-binding transcription factor activity
CEJ98_RS29805	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
CEJ98_RS29810	COG1301	dicarboxylic acid transport
CEJ98_RS29885	COG1595	DNA-templated transcription, initiation
CEJ98_RS29905	COG0631	protein serine/threonine phosphatase activity
CEJ98_RS30020	COG0515	serine threonine protein kinase
CEJ98_RS30050	COG0443	Heat shock 70 kDa protein
CEJ98_RS30055	COG0443	Heat shock 70 kDa protein
CEJ98_RS30065	COG2197	response regulator
CEJ98_RS30070	COG0840	transmembrane signaling receptor activity
CEJ98_RS30090	COG0784	Response regulator, receiver
CEJ98_RS30090	COG0835	chemotaxis
CEJ98_RS30110	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CEJ98_RS30115	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CEJ98_RS30120	COG0745	RESPONSE REGULATOR receiver
CEJ98_RS30125	COG5000	phosphorelay sensor kinase activity
CEJ98_RS30125	COG5002	protein histidine kinase activity
CEJ98_RS30150	COG1126	abc transporter atp-binding protein
CEJ98_RS30155	COG0765	amino acid transport
CEJ98_RS30160	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CEJ98_RS30180	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CEJ98_RS30185	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CEJ98_RS30195	COG0346	lactoylglutathione lyase activity
CEJ98_RS30200	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CEJ98_RS30215	COG0583	DNA-binding transcription factor activity
CEJ98_RS30220	COG2207	Transcriptional regulator
CEJ98_RS30240	COG0765	amino acid transport
CEJ98_RS30250	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CEJ98_RS30265	COG0583	DNA-binding transcription factor activity
CEJ98_RS30270	COG4638	Rieske (2fe-2S)
CEJ98_RS30275	COG3842	ATPase activity
CEJ98_RS30300	COG1335	isochorismatase
CEJ98_RS30305	COG2814	Major facilitator Superfamily
CEJ98_RS30320	COG1657	PFAM Prenyltransferase squalene oxidase
CEJ98_RS30340	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CEJ98_RS30350	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CEJ98_RS30365	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CEJ98_RS30390	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
CEJ98_RS30405	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CEJ98_RS30425	COG0022	dehydrogenase e1 component
CEJ98_RS30445	COG2837	iron assimilation
CEJ98_RS30450	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CEJ98_RS30465	COG1840	ABC-type Fe3 transport system, periplasmic component
CEJ98_RS30470	COG3842	ATPase activity
CEJ98_RS30515	COG1450	Type ii and iii secretion system protein
CEJ98_RS30520	COG2207	Transcriptional regulator
CEJ98_RS30565	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CEJ98_RS30570	COG4789	Type iii secretion
CEJ98_RS30580	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CEJ98_RS30590	COG4794	Type iii secretion
CEJ98_RS30610	COG2188	Transcriptional regulator
CEJ98_RS30630	COG0840	transmembrane signaling receptor activity
CEJ98_RS30645	COG0312	modulator of DNA gyrase
CEJ98_RS30650	COG0312	modulator of DNA gyrase
CEJ98_RS30660	COG4178	(ABC) transporter
CEJ98_RS30680	COG4774	siderophore transport
CEJ98_RS30685	COG1522	sequence-specific DNA binding
CEJ98_RS30695	COG1595	DNA-templated transcription, initiation
CEJ98_RS30705	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CEJ98_RS30710	COG2814	Major facilitator Superfamily
CEJ98_RS30715	COG0318	PFAM AMP-dependent synthetase and ligase
CEJ98_RS30720	COG1024	Enoyl-CoA hydratase
CEJ98_RS30740	COG0500	methyltransferase
CEJ98_RS30750	COG2807	transmembrane transport
CEJ98_RS30790	COG0259	pyridoxamine-phosphate oxidase activity
CEJ98_RS30795	COG0583	DNA-binding transcription factor activity
CEJ98_RS30810	COG4221	oxidoreductase activity
CEJ98_RS30815	COG1309	transcriptional regulator
CEJ98_RS30830	COG0513	Belongs to the DEAD box helicase family
CEJ98_RS30845	COG0300	oxidoreductase activity
CEJ98_RS30850	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CEJ98_RS30855	COG0583	DNA-binding transcription factor activity
CEJ98_RS30860	COG0417	DNA replication proofreading
CEJ98_RS30865	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
CEJ98_RS30875	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
CEJ98_RS30885	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CEJ98_RS30890	COG0477	Major facilitator Superfamily
CEJ98_RS30905	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CEJ98_RS30935	COG1414	Transcriptional regulator
CEJ98_RS30950	COG0583	DNA-binding transcription factor activity
CEJ98_RS30965	COG2159	amidohydrolase
CEJ98_RS30970	COG3384	dioxygenase
CEJ98_RS30980	COG0179	Fumarylacetoacetate (FAA) hydrolase
CEJ98_RS30990	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CEJ98_RS30995	COG4670	ketone body catabolic process
CEJ98_RS31000	COG2030	dehydratase
CEJ98_RS31015	COG0432	Pfam Uncharacterised protein family UPF0047
CEJ98_RS31020	COG1063	alcohol dehydrogenase
CEJ98_RS31025	COG4948	Mandelate Racemase Muconate Lactonizing
CEJ98_RS31030	COG2186	Transcriptional regulator
CEJ98_RS31035	COG0246	Mannitol dehydrogenase
CEJ98_RS31040	COG2271	Major facilitator Superfamily
CEJ98_RS31045	COG1404	Belongs to the peptidase S8 family
CEJ98_RS31060	COG3706	GGDEF domain
CEJ98_RS31070	COG0523	cobalamin synthesis protein
CEJ98_RS31080	COG0215	cysteine-tRNA ligase activity
CEJ98_RS31090	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
CEJ98_RS31110	COG0477	Major facilitator Superfamily
CEJ98_RS31115	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
CEJ98_RS31135	COG0583	DNA-binding transcription factor activity
CEJ98_RS31160	COG0662	Cupin 2, conserved barrel domain protein
CEJ98_RS31170	COG0318	PFAM AMP-dependent synthetase and ligase
CEJ98_RS31205	COG4221	oxidoreductase activity
CEJ98_RS31210	COG0583	DNA-binding transcription factor activity
CEJ98_RS31215	COG3550	peptidyl-serine autophosphorylation
CEJ98_RS31235	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CEJ98_RS31240	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CEJ98_RS31250	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
CEJ98_RS31270	COG0302	gtp cyclohydrolase
CEJ98_RS31275	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS31280	COG1045	serine acetyltransferase
CEJ98_RS31290	COG0589	response to stress
CEJ98_RS31295	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CEJ98_RS31310	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS31340	COG1414	Transcriptional regulator
CEJ98_RS31350	COG1764	response to oxidative stress
CEJ98_RS31370	COG0697	spore germination
CEJ98_RS31380	COG4221	oxidoreductase activity
CEJ98_RS31385	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
CEJ98_RS31395	COG4566	intracellular signal transduction
CEJ98_RS31400	COG4191	Histidine kinase
CEJ98_RS31405	COG4566	intracellular signal transduction
CEJ98_RS31425	COG0583	DNA-binding transcription factor activity
CEJ98_RS31445	COG1309	transcriptional regulator
CEJ98_RS31450	COG0604	alcohol dehydrogenase
CEJ98_RS31460	COG2186	Transcriptional regulator
CEJ98_RS31470	COG1172	Belongs to the binding-protein-dependent transport system permease family
CEJ98_RS31480	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS31485	COG4948	Mandelate Racemase Muconate Lactonizing
CEJ98_RS31495	COG2124	cytochrome p450
CEJ98_RS31505	COG0583	DNA-binding transcription factor activity
CEJ98_RS31545	COG3685	Protein conserved in bacteria
CEJ98_RS31555	COG0688	phosphatidylethanolamine metabolic process
CEJ98_RS31560	COG2204	response regulator
CEJ98_RS31565	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
CEJ98_RS31580	COG1285	pathogenesis
CEJ98_RS31585	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
CEJ98_RS31595	COG2814	Major facilitator Superfamily
CEJ98_RS31600	COG1566	PFAM secretion protein HlyD family protein
CEJ98_RS31605	COG0028	Belongs to the TPP enzyme family
CEJ98_RS31615	COG2124	cytochrome p450
CEJ98_RS31625	COG2233	PERMEase
CEJ98_RS31650	COG1278	Cold shock
CEJ98_RS31690	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS31700	COG3468	outer membrane autotransporter barrel domain protein
CEJ98_RS31705	COG0583	DNA-binding transcription factor activity
CEJ98_RS31720	COG2197	response regulator
CEJ98_RS31755	COG0739	heme binding
CEJ98_RS31755	COG1196	nuclear chromosome segregation
CEJ98_RS31755	COG0741	lytic transglycosylase activity
CEJ98_RS31785	COG4964	Belongs to the GSP D family
CEJ98_RS31835	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CEJ98_RS31850	COG4638	Rieske (2fe-2S)
CEJ98_RS31855	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
CEJ98_RS31865	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS31880	COG1012	belongs to the aldehyde dehydrogenase family
CEJ98_RS31905	COG3459	Glycosyltransferase 36 associated
CEJ98_RS31925	COG1278	Cold shock
CEJ98_RS31945	COG0671	phosphoesterase, PA-phosphatase related
CEJ98_RS31955	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS32000	COG0583	DNA-binding transcription factor activity
CEJ98_RS32005	COG0473	3-isopropylmalate dehydrogenase activity
CEJ98_RS32015	COG1309	transcriptional regulator
CEJ98_RS32030	COG1063	alcohol dehydrogenase
CEJ98_RS32035	COG0156	8-amino-7-oxononanoate synthase activity
CEJ98_RS32040	COG1396	sequence-specific DNA binding
CEJ98_RS32070	COG1192	Involved in chromosome partitioning
CEJ98_RS32100	COG1562	ergosterol biosynthetic process
CEJ98_RS32105	COG1657	PFAM Prenyltransferase squalene oxidase
CEJ98_RS32120	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CEJ98_RS32160	COG0745	RESPONSE REGULATOR receiver
CEJ98_RS32180	COG2208	phosphoserine phosphatase activity
CEJ98_RS32180	COG2770	Histidine kinase
CEJ98_RS32190	COG1366	Belongs to the anti-sigma-factor antagonist family
CEJ98_RS32200	COG0745	RESPONSE REGULATOR receiver
CEJ98_RS32205	COG5002	protein histidine kinase activity
CEJ98_RS32210	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
CEJ98_RS32240	COG4771	TonB-dependent receptor
CEJ98_RS32250	COG4174	ABC transporter (Permease)
CEJ98_RS32255	COG4239	(ABC) transporter, permease
CEJ98_RS32260	COG4172	Belongs to the ABC transporter superfamily
CEJ98_RS32285	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CEJ98_RS32290	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
CEJ98_RS32305	COG1802	Transcriptional regulator
CEJ98_RS32345	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS32355	COG2267	carboxylic ester hydrolase activity
CEJ98_RS32370	COG0583	DNA-binding transcription factor activity
CEJ98_RS32390	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
CEJ98_RS32395	COG5424	Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ
CEJ98_RS32405	COG0535	radical SAM domain protein
CEJ98_RS32415	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CEJ98_RS32430	COG1966	Carbon starvation protein
CEJ98_RS32435	COG2879	small protein
CEJ98_RS32455	COG2059	Chromate
CEJ98_RS32460	COG0583	DNA-binding transcription factor activity
CEJ98_RS32475	COG0535	radical SAM domain protein
CEJ98_RS32495	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CEJ98_RS32540	COG0586	Pfam SNARE associated Golgi protein
CEJ98_RS32550	COG2610	gluconate transmembrane transporter activity
CEJ98_RS32565	COG2916	Histone family protein nucleoid-structuring protein H-NS
CEJ98_RS32585	COG0179	Fumarylacetoacetate (FAA) hydrolase
CEJ98_RS32595	COG5001	Diguanylate cyclase
CEJ98_RS32595	COG5002	protein histidine kinase activity
CEJ98_RS32615	COG0450	alkyl hydroperoxide reductase
CEJ98_RS32630	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
CEJ98_RS32650	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CEJ98_RS32660	COG2942	2-epimerase
CEJ98_RS32665	COG1285	pathogenesis
CEJ98_RS32680	COG2860	membrane
CEJ98_RS32695	COG2217	Heavy metal translocating P-type atpase
CEJ98_RS32700	COG3511	phospholipase C
CEJ98_RS32735	COG0583	DNA-binding transcription factor activity
CEJ98_RS32740	COG0789	Transcriptional regulator
CEJ98_RS32755	COG1562	ergosterol biosynthetic process
CEJ98_RS32765	COG1902	pentaerythritol trinitrate reductase activity
CEJ98_RS32775	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS32780	COG0583	DNA-binding transcription factor activity
CEJ98_RS32790	COG1294	oxidase, subunit
CEJ98_RS32795	COG1271	oxidase subunit
CEJ98_RS32815	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
CEJ98_RS32820	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
CEJ98_RS32825	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CEJ98_RS32845	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CEJ98_RS32850	COG1464	Belongs to the NlpA lipoprotein family
CEJ98_RS32865	COG0583	DNA-binding transcription factor activity
CEJ98_RS32895	COG0583	DNA-binding transcription factor activity
CEJ98_RS32900	COG4106	trans-aconitate 2-methyltransferase activity
CEJ98_RS32935	COG1522	sequence-specific DNA binding
CEJ98_RS32945	COG2423	ornithine cyclodeaminase activity
CEJ98_RS32950	COG0683	leucine binding
CEJ98_RS32955	COG2814	Major facilitator Superfamily
CEJ98_RS32965	COG0583	DNA-binding transcription factor activity
CEJ98_RS32970	COG0457	Tetratricopeptide repeat
CEJ98_RS32975	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
CEJ98_RS32980	COG1215	transferase activity, transferring glycosyl groups
CEJ98_RS32985	COG1215	transferase activity, transferring glycosyl groups
CEJ98_RS32990	COG0489	protein tyrosine kinase activity
CEJ98_RS33070	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CEJ98_RS33080	COG0277	FAD linked oxidase domain protein
CEJ98_RS33105	COG2124	cytochrome p450
CEJ98_RS33140	COG0753	catalase activity
CEJ98_RS33165	COG1574	metal-dependent hydrolase with the TIM-barrel fold
CEJ98_RS33175	COG0583	DNA-binding transcription factor activity
CEJ98_RS33190	COG0039	L-malate dehydrogenase activity
CEJ98_RS33200	COG1473	amidohydrolase
CEJ98_RS33215	COG0024	Methionine aminopeptidase
CEJ98_RS33325	COG0488	(ABC) transporter
CEJ98_RS33335	COG0300	oxidoreductase activity
CEJ98_RS33350	COG1172	Belongs to the binding-protein-dependent transport system permease family
CEJ98_RS33360	COG1129	ABC transporter
CEJ98_RS33380	COG2267	carboxylic ester hydrolase activity
CEJ98_RS33385	COG0753	catalase activity
CEJ98_RS33425	COG4335	DNA alkylation repair
CEJ98_RS33430	COG2860	membrane
CEJ98_RS33450	COG3250	beta-galactosidase activity
CEJ98_RS33455	COG3537	Alpha-1,2-mannosidase
CEJ98_RS33460	COG0583	DNA-binding transcription factor activity
CEJ98_RS33465	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CEJ98_RS33475	COG0477	Major facilitator Superfamily
CEJ98_RS33485	COG1522	sequence-specific DNA binding
CEJ98_RS33520	COG2862	Uncharacterized protein family, UPF0114
CEJ98_RS33545	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS33560	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
CEJ98_RS33580	COG2814	Major facilitator Superfamily
CEJ98_RS33590	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CEJ98_RS33615	COG2814	Major facilitator Superfamily
CEJ98_RS33625	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CEJ98_RS33635	COG3386	PFAM SMP-30 Gluconolaconase
CEJ98_RS33640	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CEJ98_RS33645	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
CEJ98_RS33650	COG1414	Transcriptional regulator
CEJ98_RS33655	COG1414	Transcriptional regulator
CEJ98_RS33690	COG0300	oxidoreductase activity
CEJ98_RS33695	COG2207	Transcriptional regulator
CEJ98_RS33740	COG1671	Belongs to the UPF0178 family
CEJ98_RS33750	COG0583	DNA-binding transcription factor activity
CEJ98_RS33765	COG0681	Belongs to the peptidase S26 family
CEJ98_RS33770	COG0583	DNA-binding transcription factor activity
CEJ98_RS33780	COG0625	glutathione transferase activity
CEJ98_RS33805	COG4221	oxidoreductase activity
CEJ98_RS33825	COG1280	lysine exporter protein (LysE YggA)
CEJ98_RS33830	COG0583	DNA-binding transcription factor activity
CEJ98_RS33855	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CEJ98_RS33870	COG0784	Response regulator, receiver
CEJ98_RS33870	COG4191	Histidine kinase
CEJ98_RS33905	COG0596	Alpha beta hydrolase
CEJ98_RS33910	COG1335	isochorismatase
CEJ98_RS33915	COG0154	amidase activity
CEJ98_RS33920	COG0154	amidase activity
CEJ98_RS33990	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CEJ98_RS34015	COG4670	ketone body catabolic process
CEJ98_RS34035	COG0583	DNA-binding transcription factor activity
CEJ98_RS34040	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS34060	COG4221	oxidoreductase activity
CEJ98_RS34080	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CEJ98_RS34085	COG0601	transmembrane transport
CEJ98_RS34100	COG1733	regulation of RNA biosynthetic process
CEJ98_RS34110	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CEJ98_RS34140	COG1472	Belongs to the glycosyl hydrolase 3 family
CEJ98_RS34145	COG3537	Alpha-1,2-mannosidase
CEJ98_RS34190	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
CEJ98_RS34205	COG1959	2 iron, 2 sulfur cluster binding
CEJ98_RS34265	COG2814	Major facilitator Superfamily
CEJ98_RS34270	COG3618	amidohydrolase
CEJ98_RS34290	COG0583	DNA-binding transcription factor activity
CEJ98_RS34295	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CEJ98_RS34305	COG3665	Urea carboxylase-associated protein
CEJ98_RS34310	COG4770	biotin carboxylase activity
CEJ98_RS34315	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CEJ98_RS34320	COG1116	anion transmembrane transporter activity
CEJ98_RS34325	COG2814	Major facilitator Superfamily
CEJ98_RS34330	COG0583	DNA-binding transcription factor activity
CEJ98_RS34350	COG2171	N-acyltransferase activity
CEJ98_RS34355	COG4221	oxidoreductase activity
CEJ98_RS34370	COG3537	Alpha-1,2-mannosidase
CEJ98_RS34375	COG4774	siderophore transport
CEJ98_RS34380	COG2814	Major facilitator Superfamily
CEJ98_RS34385	COG3132	Protein of unknown function, DUF480
CEJ98_RS34410	COG0367	asparagine synthase
CEJ98_RS34415	COG0300	oxidoreductase activity
CEJ98_RS34415	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CEJ98_RS34415	COG3321	synthase
CEJ98_RS34415	COG4221	oxidoreductase activity
CEJ98_RS34420	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS34420	COG4221	oxidoreductase activity
CEJ98_RS34420	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CEJ98_RS34420	COG3321	synthase
CEJ98_RS34430	COG2130	NADP-dependent
CEJ98_RS34440	COG0583	DNA-binding transcription factor activity
CEJ98_RS34450	COG1012	belongs to the aldehyde dehydrogenase family
CEJ98_RS34460	COG1473	amidohydrolase
CEJ98_RS34470	COG2072	flavoprotein involved in K transport
CEJ98_RS34495	COG4221	oxidoreductase activity
CEJ98_RS34505	COG1012	belongs to the aldehyde dehydrogenase family
CEJ98_RS34515	COG3040	lipid binding
CEJ98_RS34545	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
CEJ98_RS34550	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CEJ98_RS34590	COG0546	phosphoglycolate phosphatase activity
CEJ98_RS34595	COG2271	Major facilitator Superfamily
CEJ98_RS34600	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CEJ98_RS34605	COG0129	dihydroxy-acid dehydratase activity
CEJ98_RS34610	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CEJ98_RS34615	COG0583	DNA-binding transcription factor activity
CEJ98_RS34640	COG0596	Alpha beta hydrolase
CEJ98_RS34660	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CEJ98_RS34670	COG1129	ABC transporter
CEJ98_RS34680	COG4214	carbohydrate transport
CEJ98_RS34685	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CEJ98_RS34700	COG1858	cytochrome C peroxidase
CEJ98_RS34730	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CEJ98_RS34740	COG0583	DNA-binding transcription factor activity
CEJ98_RS34745	COG0583	DNA-binding transcription factor activity
CEJ98_RS34770	COG1902	pentaerythritol trinitrate reductase activity
CEJ98_RS34780	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CEJ98_RS34795	COG2423	ornithine cyclodeaminase activity
CEJ98_RS34800	COG1301	dicarboxylic acid transport
CEJ98_RS34810	COG0583	DNA-binding transcription factor activity
CEJ98_RS34815	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CEJ98_RS34830	COG4608	Belongs to the ABC transporter superfamily
CEJ98_RS34835	COG0444	Belongs to the ABC transporter superfamily
CEJ98_RS34840	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CEJ98_RS34845	COG0601	transmembrane transport
CEJ98_RS34855	COG1529	Aldehyde oxidase and xanthine dehydrogenase
CEJ98_RS34860	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
CEJ98_RS34865	COG2080	2 iron, 2 sulfur cluster binding
CEJ98_RS34875	COG0840	transmembrane signaling receptor activity
CEJ98_RS34885	COG0583	DNA-binding transcription factor activity
CEJ98_RS34900	COG1012	belongs to the aldehyde dehydrogenase family
CEJ98_RS34905	COG2022	thiamine diphosphate biosynthetic process
CEJ98_RS34905	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CEJ98_RS34910	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CEJ98_RS34935	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS34965	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
CEJ98_RS34980	COG2205	protein histidine kinase activity
CEJ98_RS34985	COG0784	Response regulator, receiver
CEJ98_RS34990	COG4251	negative regulation of phosphorylation
CEJ98_RS35005	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
CEJ98_RS35015	COG0625	glutathione transferase activity
CEJ98_RS35045	COG0583	DNA-binding transcription factor activity
CEJ98_RS35075	COG4774	siderophore transport
CEJ98_RS35085	COG0642	Histidine kinase
CEJ98_RS35090	COG0745	RESPONSE REGULATOR receiver
CEJ98_RS35095	COG0596	Alpha beta hydrolase
CEJ98_RS35110	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CEJ98_RS35125	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CEJ98_RS35135	COG0765	amino acid transport
CEJ98_RS35140	COG0010	Belongs to the arginase family
CEJ98_RS35160	COG0477	Major facilitator Superfamily
CEJ98_RS35215	COG4944	Protein of unknown function (DUF1109)
CEJ98_RS35220	COG1595	DNA-templated transcription, initiation
CEJ98_RS35250	COG3345	alpha-galactosidase
CEJ98_RS35255	COG2706	6-phosphogluconolactonase activity
CEJ98_RS35285	COG0697	spore germination
CEJ98_RS35300	COG0679	Auxin Efflux Carrier
CEJ98_RS35315	COG0583	DNA-binding transcription factor activity
CEJ98_RS35320	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CEJ98_RS35325	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CEJ98_RS35350	COG1764	response to oxidative stress
CEJ98_RS35355	COG1522	sequence-specific DNA binding
CEJ98_RS35365	COG1473	amidohydrolase
CEJ98_RS35385	COG0247	lactate metabolic process
CEJ98_RS35385	COG0277	FAD linked oxidase domain protein
CEJ98_RS35430	COG2207	Transcriptional regulator
CEJ98_RS35435	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS35445	COG0477	Major facilitator Superfamily
CEJ98_RS35460	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CEJ98_RS35480	COG1309	transcriptional regulator
CEJ98_RS35535	COG5634	Uncharacterized conserved protein (DUF2278)
CEJ98_RS35550	COG2814	Major facilitator Superfamily
CEJ98_RS35555	COG0583	DNA-binding transcription factor activity
CEJ98_RS35585	COG4149	molybdate abc transporter
CEJ98_RS35590	COG1840	ABC-type Fe3 transport system, periplasmic component
CEJ98_RS35600	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CEJ98_RS35610	COG2066	Belongs to the glutaminase family
CEJ98_RS35615	COG4774	siderophore transport
CEJ98_RS35620	COG0745	RESPONSE REGULATOR receiver
CEJ98_RS35625	COG2205	protein histidine kinase activity
CEJ98_RS35635	COG1077	Cell shape determining protein MreB Mrl
CEJ98_RS35685	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CEJ98_RS35710	COG3214	Protein conserved in bacteria
CEJ98_RS35715	COG0477	Major facilitator Superfamily
CEJ98_RS35725	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
CEJ98_RS35730	COG0745	RESPONSE REGULATOR receiver
CEJ98_RS35745	COG1846	Transcriptional regulator
CEJ98_RS35750	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CEJ98_RS35755	COG3842	ATPase activity
CEJ98_RS35760	COG4208	sulfate ABC transporter
CEJ98_RS35780	COG0633	Ferredoxin
CEJ98_RS35780	COG3217	Mosc domain protein beta barrel domain protein
CEJ98_RS35795	COG1116	anion transmembrane transporter activity
CEJ98_RS35800	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CEJ98_RS35805	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CEJ98_RS35815	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CEJ98_RS35825	COG0583	DNA-binding transcription factor activity
CEJ98_RS35840	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CEJ98_RS35870	COG1262	PFAM Formylglycine-generating sulfatase enzyme
CEJ98_RS35875	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
CEJ98_RS35880	COG1051	belongs to the nudix hydrolase family
CEJ98_RS35880	COG1056	cytidyltransferase-related domain
CEJ98_RS35885	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CEJ98_RS35905	COG1773	rubredoxin
CEJ98_RS35920	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS35945	COG0300	oxidoreductase activity
CEJ98_RS35975	COG1253	flavin adenine dinucleotide binding
CEJ98_RS35980	COG0583	DNA-binding transcription factor activity
CEJ98_RS36000	COG0583	DNA-binding transcription factor activity
CEJ98_RS36005	COG2814	Major facilitator Superfamily
CEJ98_RS36025	COG0583	DNA-binding transcription factor activity
CEJ98_RS36030	COG1741	Belongs to the pirin family
CEJ98_RS36035	COG2259	Doxx family
CEJ98_RS36045	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CEJ98_RS36065	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
CEJ98_RS36080	COG2203	Gaf domain
CEJ98_RS36080	COG3706	GGDEF domain
CEJ98_RS36080	COG4251	negative regulation of phosphorylation
CEJ98_RS36080	COG5001	Diguanylate cyclase
CEJ98_RS36085	COG0583	DNA-binding transcription factor activity
CEJ98_RS36090	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CEJ98_RS36120	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CEJ98_RS36195	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
CEJ98_RS36235	COG4638	Rieske (2fe-2S)
CEJ98_RS36240	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
CEJ98_RS36245	COG2146	nitrite reductase [NAD(P)H] activity
CEJ98_RS36260	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CEJ98_RS36270	COG2733	membrane
CEJ98_RS36275	COG0025	NhaP-type Na H and K H
CEJ98_RS36290	COG1012	belongs to the aldehyde dehydrogenase family
CEJ98_RS36300	COG0840	transmembrane signaling receptor activity
CEJ98_RS36310	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CEJ98_RS36310	COG0457	Tetratricopeptide repeat
CEJ98_RS36335	COG3237	CsbD-like
CEJ98_RS36340	COG0038	chloride channel
CEJ98_RS36350	COG1132	(ABC) transporter
CEJ98_RS36355	COG2837	iron assimilation
CEJ98_RS36370	COG1960	acyl-CoA dehydrogenase activity
CEJ98_RS36385	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS36395	COG2130	NADP-dependent
CEJ98_RS36400	COG4206	TonB-dependent receptor
CEJ98_RS36435	COG3795	YCII-related domain
CEJ98_RS36440	COG3795	YCII-related domain
CEJ98_RS36445	COG4941	Belongs to the sigma-70 factor family
CEJ98_RS36465	COG0662	Cupin 2, conserved barrel domain protein
CEJ98_RS36465	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
CEJ98_RS36470	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
CEJ98_RS36490	COG0489	protein tyrosine kinase activity
CEJ98_RS36490	COG3206	protein involved in exopolysaccharide biosynthesis
CEJ98_RS36510	COG0438	transferase activity, transferring glycosyl groups
CEJ98_RS36515	COG0438	transferase activity, transferring glycosyl groups
CEJ98_RS36540	COG1129	ABC transporter
CEJ98_RS36545	COG1172	Belongs to the binding-protein-dependent transport system permease family
CEJ98_RS36550	COG1172	Belongs to the binding-protein-dependent transport system permease family
CEJ98_RS36560	COG1072	(Pantothenic acid kinase))
CEJ98_RS36565	COG0745	RESPONSE REGULATOR receiver
CEJ98_RS36570	COG2205	protein histidine kinase activity
CEJ98_RS36575	COG0745	RESPONSE REGULATOR receiver
CEJ98_RS36585	COG5642	Protein of unknown function (DUF2384)
CEJ98_RS36590	COG5654	RES domain protein
CEJ98_RS36610	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
CEJ98_RS36615	COG0352	thiamine-phosphate diphosphorylase activity
CEJ98_RS36620	COG0583	DNA-binding transcription factor activity
CEJ98_RS36630	COG1253	flavin adenine dinucleotide binding
CEJ98_RS36645	COG0583	DNA-binding transcription factor activity
CEJ98_RS36680	COG1846	Transcriptional regulator
CEJ98_RS36690	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CEJ98_RS36700	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CEJ98_RS36715	COG1611	Belongs to the LOG family
CEJ98_RS36725	COG1252	NADH dehydrogenase
CEJ98_RS36730	COG0412	Dienelactone hydrolase
CEJ98_RS36750	COG0142	geranyltranstransferase activity
CEJ98_RS36760	COG1469	GTP cyclohydrolase I activity
CEJ98_RS36780	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
CEJ98_RS36785	COG2081	HI0933 family
CEJ98_RS36810	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CEJ98_RS36820	COG0500	methyltransferase
CEJ98_RS36825	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CEJ98_RS36840	COG0477	Major facilitator Superfamily
CEJ98_RS36855	COG0583	DNA-binding transcription factor activity
CEJ98_RS36860	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CEJ98_RS36915	COG4974	Belongs to the 'phage' integrase family
CEJ98_RS36925	COG2916	Histone family protein nucleoid-structuring protein H-NS
CEJ98_RS36935	COG0587	DNA-directed DNA polymerase activity
CEJ98_RS36955	COG2135	peptidase activity
CEJ98_RS36970	COG2916	Histone family protein nucleoid-structuring protein H-NS
CEJ98_RS37140	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
CEJ98_RS37245	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CEJ98_RS37250	COG3246	L-lysine catabolic process to acetate
CEJ98_RS37270	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CEJ98_RS37275	COG3328	transposase activity
CEJ98_RS37365	COG4974	Belongs to the 'phage' integrase family
CEJ98_RS37370	COG4974	Belongs to the 'phage' integrase family
CEJ98_RS37450	COG0626	cystathionine gamma-synthase activity
CEJ98_RS37455	COG1028	Short-chain dehydrogenase reductase Sdr
CEJ98_RS37470	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CEJ98_RS37475	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
CEJ98_RS37480	COG1902	pentaerythritol trinitrate reductase activity
CEJ98_RS37485	COG0587	DNA-directed DNA polymerase activity
CEJ98_RS37495	COG0583	DNA-binding transcription factor activity
CEJ98_RS37510	COG4974	Belongs to the 'phage' integrase family
CEJ98_RS37515	COG1192	Involved in chromosome partitioning
CEJ98_RS37520	COG1475	DNA binding
CEJ98_RS37540	COG3504	Conjugal transfer protein
CEJ98_RS37655	COG0629	single-stranded DNA binding
CEJ98_RS37735	COG1484	DNA-dependent DNA replication
CEJ98_RS37740	COG4584	PFAM Integrase catalytic
CEJ98_RS37750	COG1475	DNA binding
CEJ98_RS37845	COG4962	Type ii secretion system protein e
CEJ98_RS37905	COG0210	DNA helicase
CEJ98_RS38065	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
CEJ98_RS38075	COG0789	Transcriptional regulator
CEJ98_RS38180	COG0789	Transcriptional regulator
CEJ98_RS38210	COG0789	Transcriptional regulator