##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM2466241v1 #!genome-build-accession NCBI_Assembly:GCF_024662415.1 #!annotation-date 08/15/2022 13:07:48 #!annotation-source NCBI RefSeq ##sequence-region NZ_CP100136.1 1 3644544 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=337 NZ_CP100136.1 RefSeq region 1 3644544 . + . ID=NZ_CP100136.1:1..3644544;Dbxref=taxon:337;Is_circular=true;Name=1;chromosome=1;collection-date=2018;country=South Korea: Taean-gun;gbkey=Src;genome=chromosome;mol_type=genomic DNA;strain=R93 NZ_CP100136.1 RefSeq gene 101 1705 . + . ID=gene-NIV78_RS00005;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=NIV78_RS00005 NZ_CP100136.1 Protein Homology CDS 101 1705 . + 0 ID=cds-WP_012734114.1;Parent=gene-NIV78_RS00005;Dbxref=Genbank:WP_012734114.1;Name=WP_012734114.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401751.1;locus_tag=NIV78_RS00005;product=chromosomal replication initiator protein DnaA;protein_id=WP_012734114.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1891 2997 . + . ID=gene-NIV78_RS00010;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=NIV78_RS00010 NZ_CP100136.1 Protein Homology CDS 1891 2997 . + 0 ID=cds-WP_012734115.1;Parent=gene-NIV78_RS00010;Dbxref=Genbank:WP_012734115.1;Name=WP_012734115.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009906826.1;locus_tag=NIV78_RS00010;product=DNA polymerase III subunit beta;protein_id=WP_012734115.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3235 5712 . + . ID=gene-NIV78_RS00015;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=NIV78_RS00015 NZ_CP100136.1 Protein Homology CDS 3235 5712 . + 0 ID=cds-WP_012734116.1;Parent=gene-NIV78_RS00015;Dbxref=Genbank:WP_012734116.1;Name=WP_012734116.1;Ontology_term=GO:0006265,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrB;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009906825.1;locus_tag=NIV78_RS00015;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_012734116.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 5908 6045 . - . ID=gene-NIV78_RS00020;Name=NIV78_RS00020;end_range=6045,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS00020;partial=true;pseudo=true NZ_CP100136.1 Protein Homology CDS 5908 6045 . - 0 ID=cds-NIV78_RS00020;Parent=gene-NIV78_RS00020;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=6045,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611183.1;locus_tag=NIV78_RS00020;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 6161 6385 . - . ID=gene-NIV78_RS00025;Name=NIV78_RS00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00025 NZ_CP100136.1 Protein Homology CDS 6161 6385 . - 0 ID=cds-WP_017432601.1;Parent=gene-NIV78_RS00025;Dbxref=Genbank:WP_017432601.1;Name=WP_017432601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012432984.1;locus_tag=NIV78_RS00025;product=hypothetical protein;protein_id=WP_017432601.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 6485 6995 . - . ID=gene-NIV78_RS00030;Name=NIV78_RS00030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS00030;partial=true;pseudo=true;start_range=.,6485 NZ_CP100136.1 Protein Homology CDS 6485 6995 . - 0 ID=cds-NIV78_RS00030;Parent=gene-NIV78_RS00030;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611587.1;locus_tag=NIV78_RS00030;partial=true;product=transposase;pseudo=true;start_range=.,6485;transl_table=11 NZ_CP100136.1 RefSeq gene 7166 7696 . + . ID=gene-NIV78_RS00035;Name=NIV78_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00035 NZ_CP100136.1 Protein Homology CDS 7166 7696 . + 0 ID=cds-WP_257757060.1;Parent=gene-NIV78_RS00035;Dbxref=Genbank:WP_257757060.1;Name=WP_257757060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425404.1;locus_tag=NIV78_RS00035;product=hypothetical protein;protein_id=WP_257757060.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 7770 8896 . - . ID=gene-NIV78_RS00040;Name=NIV78_RS00040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS00040;pseudo=true NZ_CP100136.1 Protein Homology CDS 7770 8896 . - 0 ID=cds-NIV78_RS00040;Parent=gene-NIV78_RS00040;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612008.1;locus_tag=NIV78_RS00040;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 9191 9547 . + . ID=gene-NIV78_RS00045;Name=NIV78_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00045 NZ_CP100136.1 Protein Homology CDS 9191 9547 . + 0 ID=cds-WP_017924097.1;Parent=gene-NIV78_RS00045;Dbxref=Genbank:WP_017924097.1;Name=WP_017924097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734117.1;locus_tag=NIV78_RS00045;product=DUF1311 domain-containing protein;protein_id=WP_017924097.1;transl_table=11 NZ_CP100136.1 RefSeq gene 9601 10146 . - . ID=gene-NIV78_RS00050;Name=NIV78_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00050 NZ_CP100136.1 Protein Homology CDS 9601 10146 . - 0 ID=cds-WP_017924098.1;Parent=gene-NIV78_RS00050;Dbxref=Genbank:WP_017924098.1;Name=WP_017924098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487164.1;locus_tag=NIV78_RS00050;product=cytochrome b;protein_id=WP_017924098.1;transl_table=11 NZ_CP100136.1 RefSeq gene 10143 11216 . - . ID=gene-NIV78_RS00055;Name=NIV78_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00055 NZ_CP100136.1 Protein Homology CDS 10143 11216 . - 0 ID=cds-WP_017924099.1;Parent=gene-NIV78_RS00055;Dbxref=Genbank:WP_017924099.1;Name=WP_017924099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734119.1;locus_tag=NIV78_RS00055;product=catalase family peroxidase;protein_id=WP_017924099.1;transl_table=11 NZ_CP100136.1 RefSeq gene 11419 11934 . + . ID=gene-NIV78_RS00060;Name=NIV78_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00060 NZ_CP100136.1 Protein Homology CDS 11419 11934 . + 0 ID=cds-WP_012734120.1;Parent=gene-NIV78_RS00060;Dbxref=Genbank:WP_012734120.1;Name=WP_012734120.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011401646.1;locus_tag=NIV78_RS00060;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_012734120.1;transl_table=11 NZ_CP100136.1 RefSeq gene 11931 12719 . + . ID=gene-NIV78_RS00065;Name=NIV78_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00065 NZ_CP100136.1 Protein Homology CDS 11931 12719 . + 0 ID=cds-WP_251107202.1;Parent=gene-NIV78_RS00065;Dbxref=Genbank:WP_251107202.1;Name=WP_251107202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734121.1;locus_tag=NIV78_RS00065;product=anti-sigma factor;protein_id=WP_251107202.1;transl_table=11 NZ_CP100136.1 RefSeq gene 13403 16447 . - . ID=gene-NIV78_RS00070;Name=NIV78_RS00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00070 NZ_CP100136.1 Protein Homology CDS 13403 16447 . - 0 ID=cds-WP_012734122.1;Parent=gene-NIV78_RS00070;Dbxref=Genbank:WP_012734122.1;Name=WP_012734122.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734122.1;locus_tag=NIV78_RS00070;product=DEAD/DEAH box helicase family protein;protein_id=WP_012734122.1;transl_table=11 NZ_CP100136.1 RefSeq gene 16492 18516 . - . ID=gene-NIV78_RS00075;Name=NIV78_RS00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00075 NZ_CP100136.1 Protein Homology CDS 16492 18516 . - 0 ID=cds-WP_012734123.1;Parent=gene-NIV78_RS00075;Dbxref=Genbank:WP_012734123.1;Name=WP_012734123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734123.1;locus_tag=NIV78_RS00075;product=site-specific DNA-methyltransferase;protein_id=WP_012734123.1;transl_table=11 NZ_CP100136.1 RefSeq gene 18853 19632 . - . ID=gene-NIV78_RS00080;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=NIV78_RS00080 NZ_CP100136.1 Protein Homology CDS 18853 19632 . - 0 ID=cds-WP_012734124.1;Parent=gene-NIV78_RS00080;Dbxref=Genbank:WP_012734124.1;Name=WP_012734124.1;Ontology_term=GO:0006605,GO:0044780,GO:0016021;gbkey=CDS;gene=fliR;go_component=integral component of membrane|0016021||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491278.1;locus_tag=NIV78_RS00080;product=flagellar biosynthetic protein FliR;protein_id=WP_012734124.1;transl_table=11 NZ_CP100136.1 RefSeq gene 19667 19939 . - . ID=gene-NIV78_RS00085;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=NIV78_RS00085 NZ_CP100136.1 Protein Homology CDS 19667 19939 . - 0 ID=cds-WP_012734125.1;Parent=gene-NIV78_RS00085;Dbxref=Genbank:WP_012734125.1;Name=WP_012734125.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliQ;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734125.1;locus_tag=NIV78_RS00085;product=flagellar biosynthesis protein FliQ;protein_id=WP_012734125.1;transl_table=11 NZ_CP100136.1 RefSeq gene 19953 20753 . - . ID=gene-NIV78_RS00090;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=NIV78_RS00090 NZ_CP100136.1 Protein Homology CDS 19953 20753 . - 0 ID=cds-WP_012734126.1;Parent=gene-NIV78_RS00090;Dbxref=Genbank:WP_012734126.1;Name=WP_012734126.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0001539;gbkey=CDS;gene=fliP;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734126.1;locus_tag=NIV78_RS00090;product=flagellar type III secretion system pore protein FliP;protein_id=WP_012734126.1;transl_table=11 NZ_CP100136.1 RefSeq gene 20756 21364 . - . ID=gene-NIV78_RS00095;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=NIV78_RS00095 NZ_CP100136.1 Protein Homology CDS 20756 21364 . - 0 ID=cds-WP_251107203.1;Parent=gene-NIV78_RS00095;Dbxref=Genbank:WP_251107203.1;Name=WP_251107203.1;Ontology_term=GO:0044781;gbkey=CDS;gene=fliO;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734127.1;locus_tag=NIV78_RS00095;product=flagellar biosynthetic protein FliO;protein_id=WP_251107203.1;transl_table=11 NZ_CP100136.1 RefSeq gene 21361 21795 . - . ID=gene-NIV78_RS00100;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=NIV78_RS00100 NZ_CP100136.1 Protein Homology CDS 21361 21795 . - 0 ID=cds-WP_012734128.1;Parent=gene-NIV78_RS00100;Dbxref=Genbank:WP_012734128.1;Name=WP_012734128.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734128.1;locus_tag=NIV78_RS00100;product=flagellar motor switch protein FliN;protein_id=WP_012734128.1;transl_table=11 NZ_CP100136.1 RefSeq gene 21788 22786 . - . ID=gene-NIV78_RS00105;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=NIV78_RS00105 NZ_CP100136.1 Protein Homology CDS 21788 22786 . - 0 ID=cds-WP_012734129.1;Parent=gene-NIV78_RS00105;Dbxref=Genbank:WP_012734129.1;Name=WP_012734129.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004524547.1;locus_tag=NIV78_RS00105;product=flagellar motor switch protein FliM;protein_id=WP_012734129.1;transl_table=11 NZ_CP100136.1 RefSeq gene 22805 23305 . - . ID=gene-NIV78_RS00110;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=NIV78_RS00110 NZ_CP100136.1 Protein Homology CDS 22805 23305 . - 0 ID=cds-WP_012734130.1;Parent=gene-NIV78_RS00110;Dbxref=Genbank:WP_012734130.1;Name=WP_012734130.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734130.1;locus_tag=NIV78_RS00110;product=flagellar basal body-associated protein FliL;protein_id=WP_012734130.1;transl_table=11 NZ_CP100136.1 RefSeq gene 23757 24701 . + . ID=gene-NIV78_RS00115;Name=NIV78_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00115 NZ_CP100136.1 Protein Homology CDS 23757 24701 . + 0 ID=cds-WP_012734131.1;Parent=gene-NIV78_RS00115;Dbxref=Genbank:WP_012734131.1;Name=WP_012734131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734131.1;locus_tag=NIV78_RS00115;product=LysR family transcriptional regulator;protein_id=WP_012734131.1;transl_table=11 NZ_CP100136.1 RefSeq gene 24809 25270 . - . ID=gene-NIV78_RS00120;Name=NIV78_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00120 NZ_CP100136.1 Protein Homology CDS 24809 25270 . - 0 ID=cds-WP_012734132.1;Parent=gene-NIV78_RS00120;Dbxref=Genbank:WP_012734132.1;Name=WP_012734132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734132.1;locus_tag=NIV78_RS00120;product=MarR family transcriptional regulator;protein_id=WP_012734132.1;transl_table=11 NZ_CP100136.1 RefSeq gene 25585 27108 . + . ID=gene-NIV78_RS00125;Name=NIV78_RS00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00125 NZ_CP100136.1 Protein Homology CDS 25585 27108 . + 0 ID=cds-WP_012734133.1;Parent=gene-NIV78_RS00125;Dbxref=Genbank:WP_012734133.1;Name=WP_012734133.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696122.1;locus_tag=NIV78_RS00125;product=efflux transporter outer membrane subunit;protein_id=WP_012734133.1;transl_table=11 NZ_CP100136.1 RefSeq gene 27222 27998 . - . ID=gene-NIV78_RS00130;Name=NIV78_RS00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00130 NZ_CP100136.1 Protein Homology CDS 27222 27998 . - 0 ID=cds-WP_017924430.1;Parent=gene-NIV78_RS00130;Dbxref=Genbank:WP_017924430.1;Name=WP_017924430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734134.1;locus_tag=NIV78_RS00130;product=type II secretion system protein N;protein_id=WP_017924430.1;transl_table=11 NZ_CP100136.1 RefSeq gene 28051 28554 . - . ID=gene-NIV78_RS00135;Name=NIV78_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00135 NZ_CP100136.1 Protein Homology CDS 28051 28554 . - 0 ID=cds-WP_012734135.1;Parent=gene-NIV78_RS00135;Dbxref=Genbank:WP_012734135.1;Name=WP_012734135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327581.1;locus_tag=NIV78_RS00135;product=type II secretion system protein M;protein_id=WP_012734135.1;transl_table=11 NZ_CP100136.1 RefSeq gene 28551 29963 . - . ID=gene-NIV78_RS00140;Name=gspL;gbkey=Gene;gene=gspL;gene_biotype=protein_coding;locus_tag=NIV78_RS00140 NZ_CP100136.1 Protein Homology CDS 28551 29963 . - 0 ID=cds-WP_100556143.1;Parent=gene-NIV78_RS00140;Dbxref=Genbank:WP_100556143.1;Name=WP_100556143.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspL;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004533517.1;locus_tag=NIV78_RS00140;product=type II secretion system protein GspL;protein_id=WP_100556143.1;transl_table=11 NZ_CP100136.1 RefSeq gene 29988 31124 . - . ID=gene-NIV78_RS00145;Name=gspK;gbkey=Gene;gene=gspK;gene_biotype=protein_coding;locus_tag=NIV78_RS00145 NZ_CP100136.1 Protein Homology CDS 29988 31124 . - 0 ID=cds-WP_017425333.1;Parent=gene-NIV78_RS00145;Dbxref=Genbank:WP_017425333.1;Name=WP_017425333.1;Ontology_term=GO:0009306,GO:0016021;gbkey=CDS;gene=gspK;go_component=integral component of membrane|0016021||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425333.1;locus_tag=NIV78_RS00145;product=type II secretion system minor pseudopilin GspK;protein_id=WP_017425333.1;transl_table=11 NZ_CP100136.1 RefSeq gene 31121 31798 . - . ID=gene-NIV78_RS00150;Name=NIV78_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00150 NZ_CP100136.1 Protein Homology CDS 31121 31798 . - 0 ID=cds-WP_017923395.1;Parent=gene-NIV78_RS00150;Dbxref=Genbank:WP_017923395.1;Name=WP_017923395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734138.1;locus_tag=NIV78_RS00150;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_017923395.1;transl_table=11 NZ_CP100136.1 RefSeq gene 31776 32195 . - . ID=gene-NIV78_RS00155;Name=gspI;gbkey=Gene;gene=gspI;gene_biotype=protein_coding;locus_tag=NIV78_RS00155 NZ_CP100136.1 Protein Homology CDS 31776 32195 . - 0 ID=cds-WP_012734139.1;Parent=gene-NIV78_RS00155;Dbxref=Genbank:WP_012734139.1;Name=WP_012734139.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspI;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004524538.1;locus_tag=NIV78_RS00155;product=type II secretion system minor pseudopilin GspI;protein_id=WP_012734139.1;transl_table=11 NZ_CP100136.1 RefSeq gene 32192 32683 . - . ID=gene-NIV78_RS00160;Name=NIV78_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00160 NZ_CP100136.1 Protein Homology CDS 32192 32683 . - 0 ID=cds-WP_012734140.1;Parent=gene-NIV78_RS00160;Dbxref=Genbank:WP_012734140.1;Name=WP_012734140.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734140.1;locus_tag=NIV78_RS00160;product=GspH/FimT family pseudopilin;protein_id=WP_012734140.1;transl_table=11 NZ_CP100136.1 RefSeq gene 32730 33182 . - . ID=gene-NIV78_RS00165;Name=gspG;gbkey=Gene;gene=gspG;gene_biotype=protein_coding;locus_tag=NIV78_RS00165 NZ_CP100136.1 Protein Homology CDS 32730 33182 . - 0 ID=cds-WP_012734141.1;Parent=gene-NIV78_RS00165;Dbxref=Genbank:WP_012734141.1;Name=WP_012734141.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspG;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751354.1;locus_tag=NIV78_RS00165;product=type II secretion system major pseudopilin GspG;protein_id=WP_012734141.1;transl_table=11 NZ_CP100136.1 RefSeq gene 33332 33742 . + . ID=gene-NIV78_RS00170;Name=NIV78_RS00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00170 NZ_CP100136.1 Protein Homology CDS 33332 33742 . + 0 ID=cds-WP_012734142.1;Parent=gene-NIV78_RS00170;Dbxref=Genbank:WP_012734142.1;Name=WP_012734142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910818.1;locus_tag=NIV78_RS00170;product=general secretion pathway protein GspC;protein_id=WP_012734142.1;transl_table=11 NZ_CP100136.1 RefSeq gene 33824 35041 . - . ID=gene-NIV78_RS00175;Name=gspF;gbkey=Gene;gene=gspF;gene_biotype=protein_coding;locus_tag=NIV78_RS00175 NZ_CP100136.1 Protein Homology CDS 33824 35041 . - 0 ID=cds-WP_012734143.1;Parent=gene-NIV78_RS00175;Dbxref=Genbank:WP_012734143.1;Name=WP_012734143.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspF;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477248.1;locus_tag=NIV78_RS00175;product=type II secretion system inner membrane protein GspF;protein_id=WP_012734143.1;transl_table=11 NZ_CP100136.1 RefSeq gene 35046 36479 . - . ID=gene-NIV78_RS00180;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=NIV78_RS00180 NZ_CP100136.1 Protein Homology CDS 35046 36479 . - 0 ID=cds-WP_017432979.1;Parent=gene-NIV78_RS00180;Dbxref=Genbank:WP_017432979.1;Name=WP_017432979.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspE;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696133.1;locus_tag=NIV78_RS00180;product=type II secretion system ATPase GspE;protein_id=WP_017432979.1;transl_table=11 NZ_CP100136.1 RefSeq gene 36527 38854 . - . ID=gene-NIV78_RS00185;Name=gspD;gbkey=Gene;gene=gspD;gene_biotype=protein_coding;locus_tag=NIV78_RS00185 NZ_CP100136.1 Protein Homology CDS 36527 38854 . - 0 ID=cds-WP_237657723.1;Parent=gene-NIV78_RS00185;Dbxref=Genbank:WP_237657723.1;Name=WP_237657723.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspD;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734145.1;locus_tag=NIV78_RS00185;product=type II secretion system secretin GspD;protein_id=WP_237657723.1;transl_table=11 NZ_CP100136.1 RefSeq gene 39236 39694 . + . ID=gene-NIV78_RS00190;Name=NIV78_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00190 NZ_CP100136.1 Protein Homology CDS 39236 39694 . + 0 ID=cds-WP_012734146.1;Parent=gene-NIV78_RS00190;Dbxref=Genbank:WP_012734146.1;Name=WP_012734146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734146.1;locus_tag=NIV78_RS00190;product=lytic transglycosylase domain-containing protein;protein_id=WP_012734146.1;transl_table=11 NZ_CP100136.1 RefSeq gene 40007 41356 . + . ID=gene-NIV78_RS00195;Name=NIV78_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00195 NZ_CP100136.1 Protein Homology CDS 40007 41356 . + 0 ID=cds-WP_017923546.1;Parent=gene-NIV78_RS00195;Dbxref=Genbank:WP_017923546.1;Name=WP_017923546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006023975.1;locus_tag=NIV78_RS00195;product=GTP-binding protein;protein_id=WP_017923546.1;transl_table=11 NZ_CP100136.1 RefSeq gene 41490 41768 . - . ID=gene-NIV78_RS00200;Name=NIV78_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00200 NZ_CP100136.1 Protein Homology CDS 41490 41768 . - 0 ID=cds-WP_006401505.1;Parent=gene-NIV78_RS00200;Dbxref=Genbank:WP_006401505.1;Name=WP_006401505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008352404.1;locus_tag=NIV78_RS00200;product=HU family DNA-binding protein;protein_id=WP_006401505.1;transl_table=11 NZ_CP100136.1 RefSeq gene 41937 42146 . + . ID=gene-NIV78_RS00205;Name=NIV78_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00205 NZ_CP100136.1 GeneMarkS-2+ CDS 41937 42146 . + 0 ID=cds-WP_157384157.1;Parent=gene-NIV78_RS00205;Dbxref=Genbank:WP_157384157.1;Name=WP_157384157.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS00205;product=hypothetical protein;protein_id=WP_157384157.1;transl_table=11 NZ_CP100136.1 RefSeq gene 42152 44140 . + . ID=gene-NIV78_RS00210;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=NIV78_RS00210 NZ_CP100136.1 Protein Homology CDS 42152 44140 . + 0 ID=cds-WP_251107204.1;Parent=gene-NIV78_RS00210;Dbxref=Genbank:WP_251107204.1;Name=WP_251107204.1;Ontology_term=GO:0008033,GO:0004808,GO:0016491;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity|0004808||IEA,oxidoreductase activity|0016491||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734148.1;locus_tag=NIV78_RS00210;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WP_251107204.1;transl_table=11 NZ_CP100136.1 RefSeq gene 44915 46129 . + . ID=gene-NIV78_RS00215;Name=NIV78_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00215 NZ_CP100136.1 Protein Homology CDS 44915 46129 . + 0 ID=cds-WP_012734149.1;Parent=gene-NIV78_RS00215;Dbxref=Genbank:WP_012734149.1;Name=WP_012734149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602304.1;locus_tag=NIV78_RS00215;product=cation:proton antiporter;protein_id=WP_012734149.1;transl_table=11 NZ_CP100136.1 RefSeq gene 46179 47294 . + . ID=gene-NIV78_RS00220;Name=NIV78_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00220 NZ_CP100136.1 Protein Homology CDS 46179 47294 . + 0 ID=cds-WP_012734150.1;Parent=gene-NIV78_RS00220;Dbxref=Genbank:WP_012734150.1;Name=WP_012734150.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=cellular modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334758.1;locus_tag=NIV78_RS00220;product=YbdK family carboxylate-amine ligase;protein_id=WP_012734150.1;transl_table=11 NZ_CP100136.1 RefSeq gene 47806 48447 . + . ID=gene-NIV78_RS00225;Name=NIV78_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00225 NZ_CP100136.1 Protein Homology CDS 47806 48447 . + 0 ID=cds-WP_012734151.1;Parent=gene-NIV78_RS00225;Dbxref=Genbank:WP_012734151.1;Name=WP_012734151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734151.1;locus_tag=NIV78_RS00225;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_012734151.1;transl_table=11 NZ_CP100136.1 RefSeq gene 48485 49195 . + . ID=gene-NIV78_RS00230;Name=NIV78_RS00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00230 NZ_CP100136.1 Protein Homology CDS 48485 49195 . + 0 ID=cds-WP_012734152.1;Parent=gene-NIV78_RS00230;Dbxref=Genbank:WP_012734152.1;Name=WP_012734152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601196.1;locus_tag=NIV78_RS00230;product=glutamine amidotransferase;protein_id=WP_012734152.1;transl_table=11 NZ_CP100136.1 RefSeq gene 49418 50530 . + . ID=gene-NIV78_RS00235;Name=NIV78_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00235 NZ_CP100136.1 Protein Homology CDS 49418 50530 . + 0 ID=cds-WP_012734153.1;Parent=gene-NIV78_RS00235;Dbxref=Genbank:WP_012734153.1;Name=WP_012734153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010093147.1;locus_tag=NIV78_RS00235;product=NADH:flavin oxidoreductase/NADH oxidase;protein_id=WP_012734153.1;transl_table=11 NZ_CP100136.1 RefSeq gene 50842 51399 . + . ID=gene-NIV78_RS00240;Name=NIV78_RS00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00240 NZ_CP100136.1 Protein Homology CDS 50842 51399 . + 0 ID=cds-WP_017922292.1;Parent=gene-NIV78_RS00240;Dbxref=Genbank:WP_017922292.1;Name=WP_017922292.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734154.1;locus_tag=NIV78_RS00240;product=SET domain-containing protein-lysine N-methyltransferase;protein_id=WP_017922292.1;transl_table=11 NZ_CP100136.1 RefSeq gene 51451 53004 . - . ID=gene-NIV78_RS00245;Name=NIV78_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00245 NZ_CP100136.1 Protein Homology CDS 51451 53004 . - 0 ID=cds-WP_017922291.1;Parent=gene-NIV78_RS00245;Dbxref=Genbank:WP_017922291.1;Name=WP_017922291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424411.1;locus_tag=NIV78_RS00245;product=sensor histidine kinase;protein_id=WP_017922291.1;transl_table=11 NZ_CP100136.1 RefSeq gene 53114 53806 . - . ID=gene-NIV78_RS00250;Name=NIV78_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00250 NZ_CP100136.1 Protein Homology CDS 53114 53806 . - 0 ID=cds-WP_012734156.1;Parent=gene-NIV78_RS00250;Dbxref=Genbank:WP_012734156.1;Name=WP_012734156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401494.1;locus_tag=NIV78_RS00250;product=response regulator transcription factor;protein_id=WP_012734156.1;transl_table=11 NZ_CP100136.1 RefSeq gene 53917 54147 . + . ID=gene-NIV78_RS00255;Name=NIV78_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00255 NZ_CP100136.1 Protein Homology CDS 53917 54147 . + 0 ID=cds-WP_017424412.1;Parent=gene-NIV78_RS00255;Dbxref=Genbank:WP_017424412.1;Name=WP_017424412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401493.1;locus_tag=NIV78_RS00255;product=DUF3717 domain-containing protein;protein_id=WP_017424412.1;transl_table=11 NZ_CP100136.1 RefSeq gene 54397 54789 . - . ID=gene-NIV78_RS00260;Name=NIV78_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00260 NZ_CP100136.1 Protein Homology CDS 54397 54789 . - 0 ID=cds-WP_017424413.1;Parent=gene-NIV78_RS00260;Dbxref=Genbank:WP_017424413.1;Name=WP_017424413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011517953.1;locus_tag=NIV78_RS00260;product=4a-hydroxytetrahydrobiopterin dehydratase;protein_id=WP_017424413.1;transl_table=11 NZ_CP100136.1 RefSeq gene 54821 55726 . - . ID=gene-NIV78_RS00265;Name=phhA;gbkey=Gene;gene=phhA;gene_biotype=protein_coding;locus_tag=NIV78_RS00265 NZ_CP100136.1 Protein Homology CDS 54821 55726 . - 0 ID=cds-WP_017922290.1;Parent=gene-NIV78_RS00265;Dbxref=Genbank:WP_017922290.1;Name=WP_017922290.1;Ontology_term=GO:0006559,GO:0004505;gbkey=CDS;gene=phhA;go_function=phenylalanine 4-monooxygenase activity|0004505||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734159.1;locus_tag=NIV78_RS00265;product=phenylalanine 4-monooxygenase;protein_id=WP_017922290.1;transl_table=11 NZ_CP100136.1 RefSeq gene 55866 56357 . + . ID=gene-NIV78_RS00270;Name=NIV78_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00270 NZ_CP100136.1 Protein Homology CDS 55866 56357 . + 0 ID=cds-WP_012734160.1;Parent=gene-NIV78_RS00270;Dbxref=Genbank:WP_012734160.1;Name=WP_012734160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696149.1;locus_tag=NIV78_RS00270;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_012734160.1;transl_table=11 NZ_CP100136.1 RefSeq gene 56414 56941 . - . ID=gene-NIV78_RS00275;Name=NIV78_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00275 NZ_CP100136.1 Protein Homology CDS 56414 56941 . - 0 ID=cds-WP_017922289.1;Parent=gene-NIV78_RS00275;Dbxref=Genbank:WP_017922289.1;Name=WP_017922289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734161.1;locus_tag=NIV78_RS00275;product=class IV adenylate cyclase;protein_id=WP_017922289.1;transl_table=11 NZ_CP100136.1 RefSeq gene 57156 58055 . - . ID=gene-NIV78_RS00280;Name=NIV78_RS00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00280 NZ_CP100136.1 Protein Homology CDS 57156 58055 . - 0 ID=cds-WP_017424414.1;Parent=gene-NIV78_RS00280;Dbxref=Genbank:WP_017424414.1;Name=WP_017424414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424414.1;locus_tag=NIV78_RS00280;product=LysR family transcriptional regulator;protein_id=WP_017424414.1;transl_table=11 NZ_CP100136.1 RefSeq gene 58221 59879 . + . ID=gene-NIV78_RS00285;Name=NIV78_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00285 NZ_CP100136.1 Protein Homology CDS 58221 59879 . + 0 ID=cds-WP_017922288.1;Parent=gene-NIV78_RS00285;Dbxref=Genbank:WP_017922288.1;Name=WP_017922288.1;Ontology_term=GO:0016614,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734163.1;locus_tag=NIV78_RS00285;product=GMC family oxidoreductase N-terminal domain-containing protein;protein_id=WP_017922288.1;transl_table=11 NZ_CP100136.1 RefSeq gene 60253 61017 . + . ID=gene-NIV78_RS00290;Name=NIV78_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00290 NZ_CP100136.1 Protein Homology CDS 60253 61017 . + 0 ID=cds-WP_012734164.1;Parent=gene-NIV78_RS00290;Dbxref=Genbank:WP_012734164.1;Name=WP_012734164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734164.1;locus_tag=NIV78_RS00290;product=ABC transporter ATP-binding protein;protein_id=WP_012734164.1;transl_table=11 NZ_CP100136.1 RefSeq gene 61014 61808 . + . ID=gene-NIV78_RS00295;Name=NIV78_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00295 NZ_CP100136.1 Protein Homology CDS 61014 61808 . + 0 ID=cds-WP_017424416.1;Parent=gene-NIV78_RS00295;Dbxref=Genbank:WP_017424416.1;Name=WP_017424416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734165.1;locus_tag=NIV78_RS00295;product=ABC transporter ATP-binding protein;protein_id=WP_017424416.1;transl_table=11 NZ_CP100136.1 RefSeq gene 61886 63094 . + . ID=gene-NIV78_RS00300;Name=NIV78_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00300 NZ_CP100136.1 Protein Homology CDS 61886 63094 . + 0 ID=cds-WP_017424417.1;Parent=gene-NIV78_RS00300;Dbxref=Genbank:WP_017424417.1;Name=WP_017424417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185183.1;locus_tag=NIV78_RS00300;product=ABC transporter substrate-binding protein;protein_id=WP_017424417.1;transl_table=11 NZ_CP100136.1 RefSeq gene 63197 64081 . + . ID=gene-NIV78_RS00305;Name=NIV78_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00305 NZ_CP100136.1 Protein Homology CDS 63197 64081 . + 0 ID=cds-WP_017424418.1;Parent=gene-NIV78_RS00305;Dbxref=Genbank:WP_017424418.1;Name=WP_017424418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018441363.1;locus_tag=NIV78_RS00305;product=branched-chain amino acid ABC transporter permease;protein_id=WP_017424418.1;transl_table=11 NZ_CP100136.1 RefSeq gene 64084 65061 . + . ID=gene-NIV78_RS00310;Name=NIV78_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00310 NZ_CP100136.1 Protein Homology CDS 64084 65061 . + 0 ID=cds-WP_035982934.1;Parent=gene-NIV78_RS00310;Dbxref=Genbank:WP_035982934.1;Name=WP_035982934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477270.1;locus_tag=NIV78_RS00310;product=branched-chain amino acid ABC transporter permease;protein_id=WP_035982934.1;transl_table=11 NZ_CP100136.1 RefSeq gene 65143 65505 . - . ID=gene-NIV78_RS00315;Name=NIV78_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00315 NZ_CP100136.1 GeneMarkS-2+ CDS 65143 65505 . - 0 ID=cds-WP_251107208.1;Parent=gene-NIV78_RS00315;Dbxref=Genbank:WP_251107208.1;Name=WP_251107208.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS00315;product=hypothetical protein;protein_id=WP_251107208.1;transl_table=11 NZ_CP100136.1 RefSeq gene 66078 68048 . + . ID=gene-NIV78_RS00320;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=NIV78_RS00320 NZ_CP100136.1 Protein Homology CDS 66078 68048 . + 0 ID=cds-WP_017424420.1;Parent=gene-NIV78_RS00320;Dbxref=Genbank:WP_017424420.1;Name=WP_017424420.1;Ontology_term=GO:0002098,GO:0008033,GO:0050660;gbkey=CDS;gene=mnmG;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408094.1;locus_tag=NIV78_RS00320;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_017424420.1;transl_table=11 NZ_CP100136.1 RefSeq gene 68096 68737 . + . ID=gene-NIV78_RS00325;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=NIV78_RS00325 NZ_CP100136.1 Protein Homology CDS 68096 68737 . + 0 ID=cds-WP_257757064.1;Parent=gene-NIV78_RS00325;Dbxref=Genbank:WP_257757064.1;Name=WP_257757064.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168,GO:0005575;gbkey=CDS;gene=rsmG;go_component=cellular_component|0005575||IEA;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734170.1;locus_tag=NIV78_RS00325;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_257757064.1;transl_table=11 NZ_CP100136.1 RefSeq gene 68792 69562 . + . ID=gene-NIV78_RS00330;Name=NIV78_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00330 NZ_CP100136.1 Protein Homology CDS 68792 69562 . + 0 ID=cds-WP_012734171.1;Parent=gene-NIV78_RS00330;Dbxref=Genbank:WP_012734171.1;Name=WP_012734171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006023943.1;locus_tag=NIV78_RS00330;product=AAA family ATPase;protein_id=WP_012734171.1;transl_table=11 NZ_CP100136.1 RefSeq gene 69600 70487 . + . ID=gene-NIV78_RS00335;Name=NIV78_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00335 NZ_CP100136.1 Protein Homology CDS 69600 70487 . + 0 ID=cds-WP_012734172.1;Parent=gene-NIV78_RS00335;Dbxref=Genbank:WP_012734172.1;Name=WP_012734172.1;Ontology_term=GO:0000910,GO:0007059,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cytokinesis|0000910||IEA,chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010107228.1;locus_tag=NIV78_RS00335;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_012734172.1;transl_table=11 NZ_CP100136.1 RefSeq gene 70501 71634 . + . ID=gene-NIV78_RS00340;Name=NIV78_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00340 NZ_CP100136.1 Protein Homology CDS 70501 71634 . + 0 ID=cds-WP_017432178.1;Parent=gene-NIV78_RS00340;Dbxref=Genbank:WP_017432178.1;Name=WP_017432178.1;Ontology_term=GO:0055085,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734173.1;locus_tag=NIV78_RS00340;product=SLC13 family permease;protein_id=WP_017432178.1;transl_table=11 NZ_CP100136.1 RefSeq gene 71902 72429 . + . ID=gene-NIV78_RS00345;Name=NIV78_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00345 NZ_CP100136.1 Protein Homology CDS 71902 72429 . + 0 ID=cds-WP_012734174.1;Parent=gene-NIV78_RS00345;Dbxref=Genbank:WP_012734174.1;Name=WP_012734174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401468.1;locus_tag=NIV78_RS00345;product=ATP synthase subunit I;protein_id=WP_012734174.1;transl_table=11 NZ_CP100136.1 RefSeq gene 72583 73434 . + . ID=gene-NIV78_RS00350;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=NIV78_RS00350 NZ_CP100136.1 Protein Homology CDS 72583 73434 . + 0 ID=cds-WP_012734175.1;Parent=gene-NIV78_RS00350;Dbxref=Genbank:WP_012734175.1;Name=WP_012734175.1;Ontology_term=GO:0015986,GO:0015078,GO:0045263;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011204192.1;locus_tag=NIV78_RS00350;product=F0F1 ATP synthase subunit A;protein_id=WP_012734175.1;transl_table=11 NZ_CP100136.1 RefSeq gene 73510 73779 . + . ID=gene-NIV78_RS00355;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=NIV78_RS00355 NZ_CP100136.1 Protein Homology CDS 73510 73779 . + 0 ID=cds-WP_012734176.1;Parent=gene-NIV78_RS00355;Dbxref=Genbank:WP_012734176.1;Name=WP_012734176.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734176.1;locus_tag=NIV78_RS00355;product=F0F1 ATP synthase subunit C;protein_id=WP_012734176.1;transl_table=11 NZ_CP100136.1 RefSeq gene 73912 74382 . + . ID=gene-NIV78_RS00360;Name=NIV78_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00360 NZ_CP100136.1 Protein Homology CDS 73912 74382 . + 0 ID=cds-WP_012734177.1;Parent=gene-NIV78_RS00360;Dbxref=Genbank:WP_012734177.1;Name=WP_012734177.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017772246.1;locus_tag=NIV78_RS00360;product=F0F1 ATP synthase subunit B;protein_id=WP_012734177.1;transl_table=11 NZ_CP100136.1 RefSeq gene 74385 74924 . + . ID=gene-NIV78_RS00365;Name=NIV78_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00365 NZ_CP100136.1 Protein Homology CDS 74385 74924 . + 0 ID=cds-WP_012734178.1;Parent=gene-NIV78_RS00365;Dbxref=Genbank:WP_012734178.1;Name=WP_012734178.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895498.1;locus_tag=NIV78_RS00365;product=F0F1 ATP synthase subunit delta;protein_id=WP_012734178.1;transl_table=11 NZ_CP100136.1 RefSeq gene 74969 76510 . + . ID=gene-NIV78_RS00370;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=NIV78_RS00370 NZ_CP100136.1 Protein Homology CDS 74969 76510 . + 0 ID=cds-WP_012734179.1;Parent=gene-NIV78_RS00370;Dbxref=Genbank:WP_012734179.1;Name=WP_012734179.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpA;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004524507.1;locus_tag=NIV78_RS00370;product=F0F1 ATP synthase subunit alpha;protein_id=WP_012734179.1;transl_table=11 NZ_CP100136.1 RefSeq gene 76579 77457 . + . ID=gene-NIV78_RS00375;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=NIV78_RS00375 NZ_CP100136.1 Protein Homology CDS 76579 77457 . + 0 ID=cds-WP_017922285.1;Parent=gene-NIV78_RS00375;Dbxref=Genbank:WP_017922285.1;Name=WP_017922285.1;Ontology_term=GO:0015986,GO:0046933,GO:0045261;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011299474.1;locus_tag=NIV78_RS00375;product=F0F1 ATP synthase subunit gamma;protein_id=WP_017922285.1;transl_table=11 NZ_CP100136.1 RefSeq gene 77530 78924 . + . ID=gene-NIV78_RS00380;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=NIV78_RS00380 NZ_CP100136.1 Protein Homology CDS 77530 78924 . + 0 ID=cds-WP_012734181.1;Parent=gene-NIV78_RS00380;Dbxref=Genbank:WP_012734181.1;Name=WP_012734181.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpD;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007180028.1;locus_tag=NIV78_RS00380;product=F0F1 ATP synthase subunit beta;protein_id=WP_012734181.1;transl_table=11 NZ_CP100136.1 RefSeq gene 79068 79493 . + . ID=gene-NIV78_RS00385;Name=NIV78_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00385 NZ_CP100136.1 Protein Homology CDS 79068 79493 . + 0 ID=cds-WP_012734182.1;Parent=gene-NIV78_RS00385;Dbxref=Genbank:WP_012734182.1;Name=WP_012734182.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010107215.1;locus_tag=NIV78_RS00385;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_012734182.1;transl_table=11 NZ_CP100136.1 RefSeq gene 79662 81440 . + . ID=gene-NIV78_RS00390;Name=NIV78_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00390 NZ_CP100136.1 Protein Homology CDS 79662 81440 . + 0 ID=cds-WP_017922284.1;Parent=gene-NIV78_RS00390;Dbxref=Genbank:WP_017922284.1;Name=WP_017922284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734183.1;locus_tag=NIV78_RS00390;product=AMP-binding protein;protein_id=WP_017922284.1;transl_table=11 NZ_CP100136.1 RefSeq gene 82053 82817 . - . ID=gene-NIV78_RS00395;Name=NIV78_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00395 NZ_CP100136.1 Protein Homology CDS 82053 82817 . - 0 ID=cds-WP_035981929.1;Parent=gene-NIV78_RS00395;Dbxref=Genbank:WP_035981929.1;Name=WP_035981929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334796.1;locus_tag=NIV78_RS00395;product=transporter substrate-binding domain-containing protein;protein_id=WP_035981929.1;transl_table=11 NZ_CP100136.1 RefSeq gene 83141 84235 . + . ID=gene-NIV78_RS00400;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=NIV78_RS00400 NZ_CP100136.1 Protein Homology CDS 83141 84235 . + 0 ID=cds-WP_017924469.1;Parent=gene-NIV78_RS00400;Dbxref=Genbank:WP_017924469.1;Name=WP_017924469.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423756.1;locus_tag=NIV78_RS00400;product=uroporphyrinogen decarboxylase;protein_id=WP_017924469.1;transl_table=11 NZ_CP100136.1 RefSeq gene 84669 86921 . + . ID=gene-NIV78_RS00405;Name=NIV78_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00405 NZ_CP100136.1 Protein Homology CDS 84669 86921 . + 0 ID=cds-WP_012734188.1;Parent=gene-NIV78_RS00405;Dbxref=Genbank:WP_012734188.1;Name=WP_012734188.1;Ontology_term=GO:0006260,GO:0032508,GO:0003678;gbkey=CDS;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA,DNA duplex unwinding|0032508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401456.1;locus_tag=NIV78_RS00405;product=primosomal protein N';protein_id=WP_012734188.1;transl_table=11 NZ_CP100136.1 RefSeq gene 87418 91341 . + . ID=gene-NIV78_RS00410;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=NIV78_RS00410 NZ_CP100136.1 Protein Homology CDS 87418 91341 . + 0 ID=cds-WP_012734189.1;Parent=gene-NIV78_RS00410;Dbxref=Genbank:WP_012734189.1;Name=WP_012734189.1;Ontology_term=GO:0006355,GO:0006561,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600251.1;locus_tag=NIV78_RS00410;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_012734189.1;transl_table=11 NZ_CP100136.1 RefSeq gene 91427 92566 . + . ID=gene-NIV78_RS00415;Name=NIV78_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00415 NZ_CP100136.1 Protein Homology CDS 91427 92566 . + 0 ID=cds-WP_012734190.1;Parent=gene-NIV78_RS00415;Dbxref=Genbank:WP_012734190.1;Name=WP_012734190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734190.1;locus_tag=NIV78_RS00415;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_012734190.1;transl_table=11 NZ_CP100136.1 RefSeq gene 93087 94241 . + . ID=gene-NIV78_RS00420;Name=NIV78_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00420 NZ_CP100136.1 Protein Homology CDS 93087 94241 . + 0 ID=cds-WP_017923566.1;Parent=gene-NIV78_RS00420;Dbxref=Genbank:WP_017923566.1;Name=WP_017923566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734191.1;locus_tag=NIV78_RS00420;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_017923566.1;transl_table=11 NZ_CP100136.1 RefSeq gene 94285 95076 . + . ID=gene-NIV78_RS00425;Name=NIV78_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00425 NZ_CP100136.1 Protein Homology CDS 94285 95076 . + 0 ID=cds-WP_017923565.1;Parent=gene-NIV78_RS00425;Dbxref=Genbank:WP_017923565.1;Name=WP_017923565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734192.1;locus_tag=NIV78_RS00425;product=transporter substrate-binding domain-containing protein;protein_id=WP_017923565.1;transl_table=11 NZ_CP100136.1 RefSeq gene 95104 95715 . - . ID=gene-NIV78_RS00430;Name=NIV78_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00430 NZ_CP100136.1 Protein Homology CDS 95104 95715 . - 0 ID=cds-WP_012734193.1;Parent=gene-NIV78_RS00430;Dbxref=Genbank:WP_012734193.1;Name=WP_012734193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734193.1;locus_tag=NIV78_RS00430;product=PadR family transcriptional regulator;protein_id=WP_012734193.1;transl_table=11 NZ_CP100136.1 RefSeq gene 95813 96244 . - . ID=gene-NIV78_RS00435;Name=cadR;gbkey=Gene;gene=cadR;gene_biotype=protein_coding;locus_tag=NIV78_RS00435 NZ_CP100136.1 Protein Homology CDS 95813 96244 . - 0 ID=cds-WP_017923564.1;Parent=gene-NIV78_RS00435;Dbxref=Genbank:WP_017923564.1;Name=WP_017923564.1;Ontology_term=GO:0045893,GO:0003677,GO:0003700,GO:0046872;gbkey=CDS;gene=cadR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,metal ion binding|0046872||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195850.1;locus_tag=NIV78_RS00435;product=Cd(II)/Pb(II)-responsive transcriptional regulator;protein_id=WP_017923564.1;transl_table=11 NZ_CP100136.1 RefSeq gene 96327 98780 . + . ID=gene-NIV78_RS00440;Name=NIV78_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00440 NZ_CP100136.1 Protein Homology CDS 96327 98780 . + 0 ID=cds-WP_251107209.1;Parent=gene-NIV78_RS00440;Dbxref=Genbank:WP_251107209.1;Name=WP_251107209.1;Ontology_term=GO:0042625;gbkey=CDS;go_function=ATPase-coupled ion transmembrane transporter activity|0042625||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734195.1;locus_tag=NIV78_RS00440;product=heavy metal translocating P-type ATPase;protein_id=WP_251107209.1;transl_table=11 NZ_CP100136.1 RefSeq gene 99289 100695 . + . ID=gene-NIV78_RS00445;Name=eat;gbkey=Gene;gene=eat;gene_biotype=protein_coding;locus_tag=NIV78_RS00445 NZ_CP100136.1 Protein Homology CDS 99289 100695 . + 0 ID=cds-WP_017924063.1;Parent=gene-NIV78_RS00445;Dbxref=Genbank:WP_017924063.1;Name=WP_017924063.1;Ontology_term=GO:0006865,GO:0015171,GO:0016021;gbkey=CDS;gene=eat;go_component=integral component of membrane|0016021||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195858.1;locus_tag=NIV78_RS00445;product=ethanolamine permease;protein_id=WP_017924063.1;transl_table=11 NZ_CP100136.1 RefSeq gene 100757 102154 . + . ID=gene-NIV78_RS00450;Name=NIV78_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00450 NZ_CP100136.1 Protein Homology CDS 100757 102154 . + 0 ID=cds-WP_012734197.1;Parent=gene-NIV78_RS00450;Dbxref=Genbank:WP_012734197.1;Name=WP_012734197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004524485.1;locus_tag=NIV78_RS00450;product=ethanolamine ammonia-lyase subunit EutB;protein_id=WP_012734197.1;transl_table=11 NZ_CP100136.1 RefSeq gene 102151 102939 . + . ID=gene-NIV78_RS00455;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=NIV78_RS00455 NZ_CP100136.1 Protein Homology CDS 102151 102939 . + 0 ID=cds-WP_012734198.1;Parent=gene-NIV78_RS00455;Dbxref=Genbank:WP_012734198.1;Name=WP_012734198.1;Ontology_term=GO:0006520,GO:0008851;gbkey=CDS;gene=eutC;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=cellular amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414701.1;locus_tag=NIV78_RS00455;product=ethanolamine ammonia-lyase subunit EutC;protein_id=WP_012734198.1;transl_table=11 NZ_CP100136.1 RefSeq gene 103219 104739 . - . ID=gene-NIV78_RS00460;Name=NIV78_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00460 NZ_CP100136.1 Protein Homology CDS 103219 104739 . - 0 ID=cds-WP_012734199.1;Parent=gene-NIV78_RS00460;Dbxref=Genbank:WP_012734199.1;Name=WP_012734199.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696193.1;locus_tag=NIV78_RS00460;product=aldehyde dehydrogenase family protein;protein_id=WP_012734199.1;transl_table=11 NZ_CP100136.1 RefSeq gene 105076 106137 . + . ID=gene-NIV78_RS00465;Name=NIV78_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00465 NZ_CP100136.1 Protein Homology CDS 105076 106137 . + 0 ID=cds-WP_251107210.1;Parent=gene-NIV78_RS00465;Dbxref=Genbank:WP_251107210.1;Name=WP_251107210.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734200.1;locus_tag=NIV78_RS00465;product=helix-turn-helix domain-containing protein;protein_id=WP_251107210.1;transl_table=11 NZ_CP100136.1 RefSeq gene 106337 107413 . - . ID=gene-NIV78_RS00470;Name=NIV78_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00470 NZ_CP100136.1 Protein Homology CDS 106337 107413 . - 0 ID=cds-WP_251107211.1;Parent=gene-NIV78_RS00470;Dbxref=Genbank:WP_251107211.1;Name=WP_251107211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734201.1;locus_tag=NIV78_RS00470;product=ADP-heptose--LPS heptosyltransferase;protein_id=WP_251107211.1;transl_table=11 NZ_CP100136.1 RefSeq gene 107620 109341 . - . ID=gene-NIV78_RS00475;Name=NIV78_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00475 NZ_CP100136.1 Protein Homology CDS 107620 109341 . - 0 ID=cds-WP_100556137.1;Parent=gene-NIV78_RS00475;Dbxref=Genbank:WP_100556137.1;Name=WP_100556137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734202.1;locus_tag=NIV78_RS00475;product=thiamine pyrophosphate-binding protein;protein_id=WP_100556137.1;transl_table=11 NZ_CP100136.1 RefSeq gene 109590 110978 . - . ID=gene-NIV78_RS00480;Name=NIV78_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00480 NZ_CP100136.1 Protein Homology CDS 109590 110978 . - 0 ID=cds-WP_017923233.1;Parent=gene-NIV78_RS00480;Dbxref=Genbank:WP_017923233.1;Name=WP_017923233.1;Ontology_term=GO:0009063,GO:0003941,GO:0051539;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=cellular amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015004074.1;locus_tag=NIV78_RS00480;product=L-serine ammonia-lyase;protein_id=WP_017923233.1;transl_table=11 NZ_CP100136.1 RefSeq gene 111009 112127 . - . ID=gene-NIV78_RS00485;Name=NIV78_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00485 NZ_CP100136.1 Protein Homology CDS 111009 112127 . - 0 ID=cds-WP_012734204.1;Parent=gene-NIV78_RS00485;Dbxref=Genbank:WP_012734204.1;Name=WP_012734204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004545290.1;locus_tag=NIV78_RS00485;product=alginate lyase family protein;protein_id=WP_012734204.1;transl_table=11 NZ_CP100136.1 RefSeq gene 112215 115142 . - . ID=gene-NIV78_RS00490;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=NIV78_RS00490 NZ_CP100136.1 Protein Homology CDS 112215 115142 . - 0 ID=cds-WP_153477189.1;Parent=gene-NIV78_RS00490;Dbxref=Genbank:WP_153477189.1;Name=WP_153477189.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754104.1;locus_tag=NIV78_RS00490;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_153477189.1;transl_table=11 NZ_CP100136.1 RefSeq gene 115204 115584 . - . ID=gene-NIV78_RS00495;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=NIV78_RS00495 NZ_CP100136.1 Protein Homology CDS 115204 115584 . - 0 ID=cds-WP_012734206.1;Parent=gene-NIV78_RS00495;Dbxref=Genbank:WP_012734206.1;Name=WP_012734206.1;Ontology_term=GO:0019464,GO:0003824;gbkey=CDS;gene=gcvH;go_function=catalytic activity|0003824||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759700.1;locus_tag=NIV78_RS00495;product=glycine cleavage system protein GcvH;protein_id=WP_012734206.1;transl_table=11 NZ_CP100136.1 RefSeq gene 115643 116761 . - . ID=gene-NIV78_RS00500;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=NIV78_RS00500 NZ_CP100136.1 Protein Homology CDS 115643 116761 . - 0 ID=cds-WP_043225768.1;Parent=gene-NIV78_RS00500;Dbxref=Genbank:WP_043225768.1;Name=WP_043225768.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010093063.1;locus_tag=NIV78_RS00500;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_043225768.1;transl_table=11 NZ_CP100136.1 cmsearch riboswitch 116858 116976 . - . ID=id-NZ_CP100136.1:116858..116976;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP100136.1 cmsearch riboswitch 117014 117112 . - . ID=id-NZ_CP100136.1:117014..117112;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP100136.1 RefSeq gene 117704 118108 . - . ID=gene-NIV78_RS00505;Name=NIV78_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00505 NZ_CP100136.1 Protein Homology CDS 117704 118108 . - 0 ID=cds-WP_012734208.1;Parent=gene-NIV78_RS00505;Dbxref=Genbank:WP_012734208.1;Name=WP_012734208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195883.1;locus_tag=NIV78_RS00505;product=hypothetical protein;protein_id=WP_012734208.1;transl_table=11 NZ_CP100136.1 RefSeq gene 118328 119380 . - . ID=gene-NIV78_RS00510;Name=NIV78_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00510 NZ_CP100136.1 Protein Homology CDS 118328 119380 . - 0 ID=cds-WP_012734209.1;Parent=gene-NIV78_RS00510;Dbxref=Genbank:WP_012734209.1;Name=WP_012734209.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734209.1;locus_tag=NIV78_RS00510;product=oxidoreductase;protein_id=WP_012734209.1;transl_table=11 NZ_CP100136.1 RefSeq gene 119804 121888 . + . ID=gene-NIV78_RS00515;Name=NIV78_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00515 NZ_CP100136.1 Protein Homology CDS 119804 121888 . + 0 ID=cds-WP_257757066.1;Parent=gene-NIV78_RS00515;Dbxref=Genbank:WP_257757066.1;Name=WP_257757066.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734210.1;locus_tag=NIV78_RS00515;product=UvrD-helicase domain-containing protein;protein_id=WP_257757066.1;transl_table=11 NZ_CP100136.1 RefSeq gene 122003 122905 . - . ID=gene-NIV78_RS00520;Name=NIV78_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00520 NZ_CP100136.1 Protein Homology CDS 122003 122905 . - 0 ID=cds-WP_124836165.1;Parent=gene-NIV78_RS00520;Dbxref=Genbank:WP_124836165.1;Name=WP_124836165.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011852352.1;locus_tag=NIV78_RS00520;product=c-type cytochrome;protein_id=WP_124836165.1;transl_table=11 NZ_CP100136.1 RefSeq gene 123161 123236 . + . ID=gene-NIV78_RS00525;Name=NIV78_RS00525;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS00525 NZ_CP100136.1 tRNAscan-SE tRNA 123161 123236 . + . ID=rna-NIV78_RS00525;Parent=gene-NIV78_RS00525;anticodon=(pos:123194..123196);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS00525;product=tRNA-Arg NZ_CP100136.1 tRNAscan-SE exon 123161 123236 . + . ID=exon-NIV78_RS00525-1;Parent=rna-NIV78_RS00525;anticodon=(pos:123194..123196);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS00525;product=tRNA-Arg NZ_CP100136.1 RefSeq gene 123291 124322 . - . ID=gene-NIV78_RS00530;Name=NIV78_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00530 NZ_CP100136.1 Protein Homology CDS 123291 124322 . - 0 ID=cds-WP_257757375.1;Parent=gene-NIV78_RS00530;Dbxref=Genbank:WP_257757375.1;Name=WP_257757375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734212.1;locus_tag=NIV78_RS00530;product=site-specific integrase;protein_id=WP_257757375.1;transl_table=11 NZ_CP100136.1 RefSeq gene 124235 124648 . - . ID=gene-NIV78_RS00535;Name=NIV78_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00535 NZ_CP100136.1 Protein Homology CDS 124235 124648 . - 0 ID=cds-WP_257757068.1;Parent=gene-NIV78_RS00535;Dbxref=Genbank:WP_257757068.1;Name=WP_257757068.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024139.2;locus_tag=NIV78_RS00535;product=helix-turn-helix domain-containing protein;protein_id=WP_257757068.1;transl_table=11 NZ_CP100136.1 RefSeq gene 124641 124937 . - . ID=gene-NIV78_RS00540;Name=NIV78_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00540 NZ_CP100136.1 GeneMarkS-2+ CDS 124641 124937 . - 0 ID=cds-WP_257757069.1;Parent=gene-NIV78_RS00540;Dbxref=Genbank:WP_257757069.1;Name=WP_257757069.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS00540;product=hypothetical protein;protein_id=WP_257757069.1;transl_table=11 NZ_CP100136.1 RefSeq gene 125258 128050 . - . ID=gene-NIV78_RS00545;Name=NIV78_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00545 NZ_CP100136.1 Protein Homology CDS 125258 128050 . - 0 ID=cds-WP_257757071.1;Parent=gene-NIV78_RS00545;Dbxref=Genbank:WP_257757071.1;Name=WP_257757071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019256232.1;locus_tag=NIV78_RS00545;product=toprim domain-containing protein;protein_id=WP_257757071.1;transl_table=11 NZ_CP100136.1 RefSeq gene 128053 128301 . - . ID=gene-NIV78_RS00550;Name=NIV78_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00550 NZ_CP100136.1 Protein Homology CDS 128053 128301 . - 0 ID=cds-WP_017432092.1;Parent=gene-NIV78_RS00550;Dbxref=Genbank:WP_017432092.1;Name=WP_017432092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016038182.1;locus_tag=NIV78_RS00550;product=hypothetical protein;protein_id=WP_017432092.1;transl_table=11 NZ_CP100136.1 RefSeq gene 128298 128660 . - . ID=gene-NIV78_RS00555;Name=NIV78_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00555 NZ_CP100136.1 Protein Homology CDS 128298 128660 . - 0 ID=cds-WP_257757073.1;Parent=gene-NIV78_RS00555;Dbxref=Genbank:WP_257757073.1;Name=WP_257757073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424051.1;locus_tag=NIV78_RS00555;product=hypothetical protein;protein_id=WP_257757073.1;transl_table=11 NZ_CP100136.1 RefSeq gene 128664 128858 . - . ID=gene-NIV78_RS00560;Name=NIV78_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00560 NZ_CP100136.1 Protein Homology CDS 128664 128858 . - 0 ID=cds-WP_257757074.1;Parent=gene-NIV78_RS00560;Dbxref=Genbank:WP_257757074.1;Name=WP_257757074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327646.1;locus_tag=NIV78_RS00560;product=hypothetical protein;protein_id=WP_257757074.1;transl_table=11 NZ_CP100136.1 RefSeq gene 128901 129095 . - . ID=gene-NIV78_RS00565;Name=NIV78_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00565 NZ_CP100136.1 Protein Homology CDS 128901 129095 . - 0 ID=cds-WP_257757076.1;Parent=gene-NIV78_RS00565;Dbxref=Genbank:WP_257757076.1;Name=WP_257757076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734467.1;locus_tag=NIV78_RS00565;product=hypothetical protein;protein_id=WP_257757076.1;transl_table=11 NZ_CP100136.1 RefSeq gene 129100 129294 . - . ID=gene-NIV78_RS00570;Name=NIV78_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00570 NZ_CP100136.1 Protein Homology CDS 129100 129294 . - 0 ID=cds-WP_257757077.1;Parent=gene-NIV78_RS00570;Dbxref=Genbank:WP_257757077.1;Name=WP_257757077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217443.1;locus_tag=NIV78_RS00570;product=hypothetical protein;protein_id=WP_257757077.1;transl_table=11 NZ_CP100136.1 RefSeq gene 129382 129630 . - . ID=gene-NIV78_RS00575;Name=NIV78_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00575 NZ_CP100136.1 Protein Homology CDS 129382 129630 . - 0 ID=cds-WP_006757081.1;Parent=gene-NIV78_RS00575;Dbxref=Genbank:WP_006757081.1;Name=WP_006757081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401793.1;locus_tag=NIV78_RS00575;product=ogr/Delta-like zinc finger family protein;protein_id=WP_006757081.1;transl_table=11 NZ_CP100136.1 RefSeq gene 129658 129849 . - . ID=gene-NIV78_RS00580;Name=NIV78_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00580 NZ_CP100136.1 Protein Homology CDS 129658 129849 . - 0 ID=cds-WP_012734469.1;Parent=gene-NIV78_RS00580;Dbxref=Genbank:WP_012734469.1;Name=WP_012734469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734469.1;locus_tag=NIV78_RS00580;product=hypothetical protein;protein_id=WP_012734469.1;transl_table=11 NZ_CP100136.1 RefSeq gene 129878 130069 . - . ID=gene-NIV78_RS00585;Name=NIV78_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00585 NZ_CP100136.1 Protein Homology CDS 129878 130069 . - 0 ID=cds-WP_017432096.1;Parent=gene-NIV78_RS00585;Dbxref=Genbank:WP_017432096.1;Name=WP_017432096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327650.1;locus_tag=NIV78_RS00585;product=hypothetical protein;protein_id=WP_017432096.1;transl_table=11 NZ_CP100136.1 RefSeq gene 130086 130313 . - . ID=gene-NIV78_RS00590;Name=NIV78_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00590 NZ_CP100136.1 Protein Homology CDS 130086 130313 . - 0 ID=cds-WP_257757078.1;Parent=gene-NIV78_RS00590;Dbxref=Genbank:WP_257757078.1;Name=WP_257757078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327651.1;locus_tag=NIV78_RS00590;product=hypothetical protein;protein_id=WP_257757078.1;transl_table=11 NZ_CP100136.1 RefSeq gene 130389 130880 . + . ID=gene-NIV78_RS00595;Name=NIV78_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00595 NZ_CP100136.1 Protein Homology CDS 130389 130880 . + 0 ID=cds-WP_257757079.1;Parent=gene-NIV78_RS00595;Dbxref=Genbank:WP_257757079.1;Name=WP_257757079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734224.1;locus_tag=NIV78_RS00595;product=helix-turn-helix transcriptional regulator;protein_id=WP_257757079.1;transl_table=11 NZ_CP100136.1 RefSeq gene 130871 131251 . - . ID=gene-NIV78_RS00600;Name=NIV78_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00600 NZ_CP100136.1 Protein Homology CDS 130871 131251 . - 0 ID=cds-WP_257757080.1;Parent=gene-NIV78_RS00600;Dbxref=Genbank:WP_257757080.1;Name=WP_257757080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724663.1;locus_tag=NIV78_RS00600;product=LysR family transcriptional regulator;protein_id=WP_257757080.1;transl_table=11 NZ_CP100136.1 RefSeq gene 131716 132870 . - . ID=gene-NIV78_RS00605;Name=NIV78_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00605 NZ_CP100136.1 Protein Homology CDS 131716 132870 . - 0 ID=cds-WP_257757082.1;Parent=gene-NIV78_RS00605;Dbxref=Genbank:WP_257757082.1;Name=WP_257757082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327654.1;locus_tag=NIV78_RS00605;product=phage late control D family protein;protein_id=WP_257757082.1;transl_table=11 NZ_CP100136.1 RefSeq gene 132867 133295 . - . ID=gene-NIV78_RS00610;Name=NIV78_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00610 NZ_CP100136.1 Protein Homology CDS 132867 133295 . - 0 ID=cds-WP_017432102.1;Parent=gene-NIV78_RS00610;Dbxref=Genbank:WP_017432102.1;Name=WP_017432102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401801.1;locus_tag=NIV78_RS00610;product=phage tail protein;protein_id=WP_017432102.1;transl_table=11 NZ_CP100136.1 RefSeq gene 133309 136560 . - . ID=gene-NIV78_RS00615;Name=NIV78_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00615 NZ_CP100136.1 Protein Homology CDS 133309 136560 . - 0 ID=cds-WP_257757084.1;Parent=gene-NIV78_RS00615;Dbxref=Genbank:WP_257757084.1;Name=WP_257757084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016038195.1;locus_tag=NIV78_RS00615;product=hypothetical protein;protein_id=WP_257757084.1;transl_table=11 NZ_CP100136.1 RefSeq gene 136557 136676 . - . ID=gene-NIV78_RS00620;Name=NIV78_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00620 NZ_CP100136.1 Protein Homology CDS 136557 136676 . - 0 ID=cds-WP_014724666.1;Parent=gene-NIV78_RS00620;Dbxref=Genbank:WP_014724666.1;Name=WP_014724666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724666.1;locus_tag=NIV78_RS00620;product=GpE family phage tail protein;protein_id=WP_014724666.1;transl_table=11 NZ_CP100136.1 RefSeq gene 136676 136987 . - . ID=gene-NIV78_RS00625;Name=NIV78_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00625 NZ_CP100136.1 Protein Homology CDS 136676 136987 . - 0 ID=cds-WP_006757090.1;Parent=gene-NIV78_RS00625;Dbxref=Genbank:WP_006757090.1;Name=WP_006757090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724667.1;locus_tag=NIV78_RS00625;product=phage tail assembly protein;protein_id=WP_006757090.1;transl_table=11 NZ_CP100136.1 RefSeq gene 137020 137529 . - . ID=gene-NIV78_RS00630;Name=NIV78_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00630 NZ_CP100136.1 Protein Homology CDS 137020 137529 . - 0 ID=cds-WP_257757085.1;Parent=gene-NIV78_RS00630;Dbxref=Genbank:WP_257757085.1;Name=WP_257757085.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217434.1;locus_tag=NIV78_RS00630;product=phage major tail tube protein;protein_id=WP_257757085.1;transl_table=11 NZ_CP100136.1 RefSeq gene 137559 138731 . - . ID=gene-NIV78_RS00635;Name=NIV78_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00635 NZ_CP100136.1 Protein Homology CDS 137559 138731 . - 0 ID=cds-WP_257757087.1;Parent=gene-NIV78_RS00635;Dbxref=Genbank:WP_257757087.1;Name=WP_257757087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217433.1;locus_tag=NIV78_RS00635;product=phage tail sheath protein;protein_id=WP_257757087.1;transl_table=11 NZ_CP100136.1 RefSeq gene 138843 139592 . - . ID=gene-NIV78_RS00640;Name=NIV78_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00640 NZ_CP100136.1 Protein Homology CDS 138843 139592 . - 0 ID=cds-WP_257757088.1;Parent=gene-NIV78_RS00640;Dbxref=Genbank:WP_257757088.1;Name=WP_257757088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217432.1;locus_tag=NIV78_RS00640;product=site-specific DNA-methyltransferase;protein_id=WP_257757088.1;transl_table=11 NZ_CP100136.1 RefSeq gene 139570 139752 . - . ID=gene-NIV78_RS00645;Name=NIV78_RS00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00645 NZ_CP100136.1 Protein Homology CDS 139570 139752 . - 0 ID=cds-WP_257757089.1;Parent=gene-NIV78_RS00645;Dbxref=Genbank:WP_257757089.1;Name=WP_257757089.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021626.2;locus_tag=NIV78_RS00645;product=Com family DNA-binding transcriptional regulator;protein_id=WP_257757089.1;transl_table=11 NZ_CP100136.1 RefSeq gene 139902 140240 . - . ID=gene-NIV78_RS00650;Name=NIV78_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00650 NZ_CP100136.1 Protein Homology CDS 139902 140240 . - 0 ID=cds-WP_017432108.1;Parent=gene-NIV78_RS00650;Dbxref=Genbank:WP_017432108.1;Name=WP_017432108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724672.1;locus_tag=NIV78_RS00650;product=hypothetical protein;protein_id=WP_017432108.1;transl_table=11 NZ_CP100136.1 RefSeq gene 140298 140729 . - . ID=gene-NIV78_RS00655;Name=NIV78_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00655 NZ_CP100136.1 Protein Homology CDS 140298 140729 . - 0 ID=cds-WP_257757090.1;Parent=gene-NIV78_RS00655;Dbxref=Genbank:WP_257757090.1;Name=WP_257757090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327664.1;locus_tag=NIV78_RS00655;product=phage tail assembly chaperone;protein_id=WP_257757090.1;transl_table=11 NZ_CP100136.1 RefSeq gene 140726 143833 . - . ID=gene-NIV78_RS00660;Name=NIV78_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00660 NZ_CP100136.1 Protein Homology CDS 140726 143833 . - 0 ID=cds-WP_257757091.1;Parent=gene-NIV78_RS00660;Dbxref=Genbank:WP_257757091.1;Name=WP_257757091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875769.1;locus_tag=NIV78_RS00660;product=phage tail protein;protein_id=WP_257757091.1;transl_table=11 NZ_CP100136.1 RefSeq gene 143839 144390 . - . ID=gene-NIV78_RS00665;Name=NIV78_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00665 NZ_CP100136.1 Protein Homology CDS 143839 144390 . - 0 ID=cds-WP_257757092.1;Parent=gene-NIV78_RS00665;Dbxref=Genbank:WP_257757092.1;Name=WP_257757092.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757097.1;locus_tag=NIV78_RS00665;product=phage tail protein I;protein_id=WP_257757092.1;transl_table=11 NZ_CP100136.1 RefSeq gene 144383 145288 . - . ID=gene-NIV78_RS00670;Name=NIV78_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00670 NZ_CP100136.1 Protein Homology CDS 144383 145288 . - 0 ID=cds-WP_257757093.1;Parent=gene-NIV78_RS00670;Dbxref=Genbank:WP_257757093.1;Name=WP_257757093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416675.1;locus_tag=NIV78_RS00670;product=baseplate J/gp47 family protein;protein_id=WP_257757093.1;transl_table=11 NZ_CP100136.1 RefSeq gene 145285 145650 . - . ID=gene-NIV78_RS00675;Name=NIV78_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00675 NZ_CP100136.1 Protein Homology CDS 145285 145650 . - 0 ID=cds-WP_257757094.1;Parent=gene-NIV78_RS00675;Dbxref=Genbank:WP_257757094.1;Name=WP_257757094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724677.1;locus_tag=NIV78_RS00675;product=GPW/gp25 family protein;protein_id=WP_257757094.1;transl_table=11 NZ_CP100136.1 RefSeq gene 145647 146351 . - . ID=gene-NIV78_RS00680;Name=NIV78_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00680 NZ_CP100136.1 Protein Homology CDS 145647 146351 . - 0 ID=cds-WP_257757095.1;Parent=gene-NIV78_RS00680;Dbxref=Genbank:WP_257757095.1;Name=WP_257757095.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416661.1;locus_tag=NIV78_RS00680;product=phage baseplate assembly protein V;protein_id=WP_257757095.1;transl_table=11 NZ_CP100136.1 RefSeq gene 146517 147029 . - . ID=gene-NIV78_RS00685;Name=NIV78_RS00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00685 NZ_CP100136.1 GeneMarkS-2+ CDS 146517 147029 . - 0 ID=cds-WP_257757096.1;Parent=gene-NIV78_RS00685;Dbxref=Genbank:WP_257757096.1;Name=WP_257757096.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS00685;product=hypothetical protein;protein_id=WP_257757096.1;transl_table=11 NZ_CP100136.1 RefSeq gene 147099 147548 . - . ID=gene-NIV78_RS00690;Name=NIV78_RS00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00690 NZ_CP100136.1 Protein Homology CDS 147099 147548 . - 0 ID=cds-WP_257757097.1;Parent=gene-NIV78_RS00690;Dbxref=Genbank:WP_257757097.1;Name=WP_257757097.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217424.1;locus_tag=NIV78_RS00690;product=phage virion morphogenesis protein;protein_id=WP_257757097.1;transl_table=11 NZ_CP100136.1 RefSeq gene 147548 147958 . - . ID=gene-NIV78_RS00695;Name=NIV78_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00695 NZ_CP100136.1 Protein Homology CDS 147548 147958 . - 0 ID=cds-WP_257757098.1;Parent=gene-NIV78_RS00695;Dbxref=Genbank:WP_257757098.1;Name=WP_257757098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217423.1;locus_tag=NIV78_RS00695;product=phage tail protein;protein_id=WP_257757098.1;transl_table=11 NZ_CP100136.1 RefSeq gene 147955 148446 . - . ID=gene-NIV78_RS00700;Name=NIV78_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00700 NZ_CP100136.1 Protein Homology CDS 147955 148446 . - 0 ID=cds-WP_257757099.1;Parent=gene-NIV78_RS00700;Dbxref=Genbank:WP_257757099.1;Name=WP_257757099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217422.1;locus_tag=NIV78_RS00700;product=hypothetical protein;protein_id=WP_257757099.1;transl_table=11 NZ_CP100136.1 RefSeq gene 148443 149243 . - . ID=gene-NIV78_RS00705;Name=NIV78_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00705 NZ_CP100136.1 Protein Homology CDS 148443 149243 . - 0 ID=cds-WP_257757100.1;Parent=gene-NIV78_RS00705;Dbxref=Genbank:WP_257757100.1;Name=WP_257757100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217421.1;locus_tag=NIV78_RS00705;product=N-acetylmuramidase domain-containing protein;protein_id=WP_257757100.1;transl_table=11 NZ_CP100136.1 RefSeq gene 149236 149556 . - . ID=gene-NIV78_RS00710;Name=NIV78_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00710 NZ_CP100136.1 Protein Homology CDS 149236 149556 . - 0 ID=cds-WP_257757101.1;Parent=gene-NIV78_RS00710;Dbxref=Genbank:WP_257757101.1;Name=WP_257757101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217420.1;locus_tag=NIV78_RS00710;product=phage holin family protein;protein_id=WP_257757101.1;transl_table=11 NZ_CP100136.1 RefSeq gene 149556 149930 . - . ID=gene-NIV78_RS00715;Name=NIV78_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00715 NZ_CP100136.1 Protein Homology CDS 149556 149930 . - 0 ID=cds-WP_257757102.1;Parent=gene-NIV78_RS00715;Dbxref=Genbank:WP_257757102.1;Name=WP_257757102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217419.1;locus_tag=NIV78_RS00715;product=phage holin family protein;protein_id=WP_257757102.1;transl_table=11 NZ_CP100136.1 RefSeq gene 149933 150145 . - . ID=gene-NIV78_RS00720;Name=NIV78_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00720 NZ_CP100136.1 Protein Homology CDS 149933 150145 . - 0 ID=cds-WP_017432121.1;Parent=gene-NIV78_RS00720;Dbxref=Genbank:WP_017432121.1;Name=WP_017432121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217418.1;locus_tag=NIV78_RS00720;product=tail protein X;protein_id=WP_017432121.1;transl_table=11 NZ_CP100136.1 RefSeq gene 150145 150381 . - . ID=gene-NIV78_RS00725;Name=NIV78_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00725 NZ_CP100136.1 GeneMarkS-2+ CDS 150145 150381 . - 0 ID=cds-WP_034196661.1;Parent=gene-NIV78_RS00725;Dbxref=Genbank:WP_034196661.1;Name=WP_034196661.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS00725;product=hypothetical protein;protein_id=WP_034196661.1;transl_table=11 NZ_CP100136.1 RefSeq gene 150381 150863 . - . ID=gene-NIV78_RS00730;Name=NIV78_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00730 NZ_CP100136.1 Protein Homology CDS 150381 150863 . - 0 ID=cds-WP_257757104.1;Parent=gene-NIV78_RS00730;Dbxref=Genbank:WP_257757104.1;Name=WP_257757104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416699.1;locus_tag=NIV78_RS00730;product=head completion/stabilization protein;protein_id=WP_257757104.1;transl_table=11 NZ_CP100136.1 RefSeq gene 150968 151654 . - . ID=gene-NIV78_RS00735;Name=NIV78_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00735 NZ_CP100136.1 Protein Homology CDS 150968 151654 . - 0 ID=cds-WP_077180189.1;Parent=gene-NIV78_RS00735;Dbxref=Genbank:WP_077180189.1;Name=WP_077180189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401825.1;locus_tag=NIV78_RS00735;product=terminase endonuclease subunit;protein_id=WP_077180189.1;transl_table=11 NZ_CP100136.1 RefSeq gene 151651 152670 . - . ID=gene-NIV78_RS00740;Name=NIV78_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00740 NZ_CP100136.1 Protein Homology CDS 151651 152670 . - 0 ID=cds-WP_027809296.1;Parent=gene-NIV78_RS00740;Dbxref=Genbank:WP_027809296.1;Name=WP_027809296.1;Ontology_term=GO:0019069,GO:0005198,GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217414.1;locus_tag=NIV78_RS00740;product=phage major capsid protein%2C P2 family;protein_id=WP_027809296.1;transl_table=11 NZ_CP100136.1 RefSeq gene 152707 153525 . - . ID=gene-NIV78_RS00745;Name=NIV78_RS00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00745 NZ_CP100136.1 Protein Homology CDS 152707 153525 . - 0 ID=cds-WP_257757107.1;Parent=gene-NIV78_RS00745;Dbxref=Genbank:WP_257757107.1;Name=WP_257757107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416683.1;locus_tag=NIV78_RS00745;product=GPO family capsid scaffolding protein;protein_id=WP_257757107.1;transl_table=11 NZ_CP100136.1 RefSeq gene 153670 155430 . + . ID=gene-NIV78_RS00750;Name=NIV78_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00750 NZ_CP100136.1 Protein Homology CDS 153670 155430 . + 0 ID=cds-WP_257757108.1;Parent=gene-NIV78_RS00750;Dbxref=Genbank:WP_257757108.1;Name=WP_257757108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217412.1;locus_tag=NIV78_RS00750;product=terminase ATPase subunit family protein;protein_id=WP_257757108.1;transl_table=11 NZ_CP100136.1 RefSeq gene 155420 156484 . + . ID=gene-NIV78_RS00755;Name=NIV78_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00755 NZ_CP100136.1 Protein Homology CDS 155420 156484 . + 0 ID=cds-WP_257757109.1;Parent=gene-NIV78_RS00755;Dbxref=Genbank:WP_257757109.1;Name=WP_257757109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217411.1;locus_tag=NIV78_RS00755;product=phage portal protein;protein_id=WP_257757109.1;transl_table=11 NZ_CP100136.1 RefSeq gene 157197 157952 . - . ID=gene-NIV78_RS00760;Name=NIV78_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00760 NZ_CP100136.1 Protein Homology CDS 157197 157952 . - 0 ID=cds-WP_257757111.1;Parent=gene-NIV78_RS00760;Dbxref=Genbank:WP_257757111.1;Name=WP_257757111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012416137.1;locus_tag=NIV78_RS00760;product=DUF3800 domain-containing protein;protein_id=WP_257757111.1;transl_table=11 NZ_CP100136.1 RefSeq gene 158177 159280 . - . ID=gene-NIV78_RS00765;Name=NIV78_RS00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00765 NZ_CP100136.1 Protein Homology CDS 158177 159280 . - 0 ID=cds-WP_257757113.1;Parent=gene-NIV78_RS00765;Dbxref=Genbank:WP_257757113.1;Name=WP_257757113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893924.1;locus_tag=NIV78_RS00765;product=DUF3396 domain-containing protein;protein_id=WP_257757113.1;transl_table=11 NZ_CP100136.1 RefSeq gene 159290 160018 . - . ID=gene-NIV78_RS00770;Name=NIV78_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00770 NZ_CP100136.1 Protein Homology CDS 159290 160018 . - 0 ID=cds-WP_257757114.1;Parent=gene-NIV78_RS00770;Dbxref=Genbank:WP_257757114.1;Name=WP_257757114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751049.1;locus_tag=NIV78_RS00770;product=VRR-NUC domain-containing protein;protein_id=WP_257757114.1;transl_table=11 NZ_CP100136.1 RefSeq gene 160015 160542 . - . ID=gene-NIV78_RS00775;Name=NIV78_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00775 NZ_CP100136.1 Protein Homology CDS 160015 160542 . - 0 ID=cds-WP_257757115.1;Parent=gene-NIV78_RS00775;Dbxref=Genbank:WP_257757115.1;Name=WP_257757115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751050.1;locus_tag=NIV78_RS00775;product=PAAR domain-containing protein;protein_id=WP_257757115.1;transl_table=11 NZ_CP100136.1 RefSeq gene 160681 161325 . - . ID=gene-NIV78_RS00780;Name=NIV78_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00780 NZ_CP100136.1 GeneMarkS-2+ CDS 160681 161325 . - 0 ID=cds-WP_257757116.1;Parent=gene-NIV78_RS00780;Dbxref=Genbank:WP_257757116.1;Name=WP_257757116.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS00780;product=hypothetical protein;protein_id=WP_257757116.1;transl_table=11 NZ_CP100136.1 RefSeq gene 161611 162375 . + . ID=gene-NIV78_RS00785;Name=NIV78_RS00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00785 NZ_CP100136.1 GeneMarkS-2+ CDS 161611 162375 . + 0 ID=cds-WP_257757117.1;Parent=gene-NIV78_RS00785;Dbxref=Genbank:WP_257757117.1;Name=WP_257757117.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS00785;product=hypothetical protein;protein_id=WP_257757117.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 162687 163795 . - . ID=gene-NIV78_RS00790;Name=NIV78_RS00790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS00790;pseudo=true NZ_CP100136.1 Protein Homology CDS 162687 163795 . - 0 ID=cds-NIV78_RS00790;Parent=gene-NIV78_RS00790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019256233.1;locus_tag=NIV78_RS00790;product=site-specific integrase;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 164165 164497 . - . ID=gene-NIV78_RS00795;Name=NIV78_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00795 NZ_CP100136.1 GeneMarkS-2+ CDS 164165 164497 . - 0 ID=cds-WP_017424819.1;Parent=gene-NIV78_RS00795;Dbxref=Genbank:WP_017424819.1;Name=WP_017424819.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS00795;product=hypothetical protein;protein_id=WP_017424819.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 164911 165832 . - . ID=gene-NIV78_RS00800;Name=NIV78_RS00800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS00800;pseudo=true NZ_CP100136.1 Protein Homology CDS 164911 165832 . - 0 ID=cds-NIV78_RS00800;Parent=gene-NIV78_RS00800;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734259.1;locus_tag=NIV78_RS00800;product=carbon-nitrogen hydrolase family protein;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 166011 166952 . + . ID=gene-NIV78_RS00805;Name=NIV78_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00805 NZ_CP100136.1 Protein Homology CDS 166011 166952 . + 0 ID=cds-WP_017924434.1;Parent=gene-NIV78_RS00805;Dbxref=Genbank:WP_017924434.1;Name=WP_017924434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734260.1;locus_tag=NIV78_RS00805;product=LysR family transcriptional regulator;protein_id=WP_017924434.1;transl_table=11 NZ_CP100136.1 RefSeq gene 167491 169158 . + . ID=gene-NIV78_RS00810;Name=NIV78_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00810 NZ_CP100136.1 Protein Homology CDS 167491 169158 . + 0 ID=cds-WP_251107557.1;Parent=gene-NIV78_RS00810;Dbxref=Genbank:WP_251107557.1;Name=WP_251107557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696253.1;locus_tag=NIV78_RS00810;product=acid phosphatase;protein_id=WP_251107557.1;transl_table=11 NZ_CP100136.1 RefSeq gene 169332 169958 . - . ID=gene-NIV78_RS00815;Name=NIV78_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00815 NZ_CP100136.1 Protein Homology CDS 169332 169958 . - 0 ID=cds-WP_017424065.1;Parent=gene-NIV78_RS00815;Dbxref=Genbank:WP_017424065.1;Name=WP_017424065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734262.1;locus_tag=NIV78_RS00815;product=LysE family translocator;protein_id=WP_017424065.1;transl_table=11 NZ_CP100136.1 RefSeq gene 170399 171457 . - . ID=gene-NIV78_RS00820;Name=NIV78_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00820 NZ_CP100136.1 Protein Homology CDS 170399 171457 . - 0 ID=cds-WP_012734263.1;Parent=gene-NIV78_RS00820;Dbxref=Genbank:WP_012734263.1;Name=WP_012734263.1;Ontology_term=GO:0051537;gbkey=CDS;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734263.1;locus_tag=NIV78_RS00820;product=Rieske 2Fe-2S domain-containing protein;protein_id=WP_012734263.1;transl_table=11 NZ_CP100136.1 RefSeq gene 171466 172146 . - . ID=gene-NIV78_RS00825;Name=NIV78_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00825 NZ_CP100136.1 Protein Homology CDS 171466 172146 . - 0 ID=cds-WP_045678867.1;Parent=gene-NIV78_RS00825;Dbxref=Genbank:WP_045678867.1;Name=WP_045678867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525710.1;locus_tag=NIV78_RS00825;product=acetyltransferase;protein_id=WP_045678867.1;transl_table=11 NZ_CP100136.1 RefSeq gene 172146 172910 . - . ID=gene-NIV78_RS00830;Name=NIV78_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00830 NZ_CP100136.1 Protein Homology CDS 172146 172910 . - 0 ID=cds-WP_012734265.1;Parent=gene-NIV78_RS00830;Dbxref=Genbank:WP_012734265.1;Name=WP_012734265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004200031.1;locus_tag=NIV78_RS00830;product=SDR family oxidoreductase;protein_id=WP_012734265.1;transl_table=11 NZ_CP100136.1 RefSeq gene 172907 174007 . - . ID=gene-NIV78_RS00835;Name=NIV78_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00835 NZ_CP100136.1 Protein Homology CDS 172907 174007 . - 0 ID=cds-WP_017923613.1;Parent=gene-NIV78_RS00835;Dbxref=Genbank:WP_017923613.1;Name=WP_017923613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015004037.1;locus_tag=NIV78_RS00835;product=ketoacyl-ACP synthase III;protein_id=WP_017923613.1;transl_table=11 NZ_CP100136.1 RefSeq gene 174010 174231 . - . ID=gene-NIV78_RS00840;Name=NIV78_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00840 NZ_CP100136.1 Protein Homology CDS 174010 174231 . - 0 ID=cds-WP_012734267.1;Parent=gene-NIV78_RS00840;Dbxref=Genbank:WP_012734267.1;Name=WP_012734267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696259.1;locus_tag=NIV78_RS00840;product=acyl carrier protein;protein_id=WP_012734267.1;transl_table=11 NZ_CP100136.1 RefSeq gene 174250 175281 . - . ID=gene-NIV78_RS00845;Name=NIV78_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00845 NZ_CP100136.1 Protein Homology CDS 174250 175281 . - 0 ID=cds-WP_012734268.1;Parent=gene-NIV78_RS00845;Dbxref=Genbank:WP_012734268.1;Name=WP_012734268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734268.1;locus_tag=NIV78_RS00845;product=ketoacyl-ACP synthase III;protein_id=WP_012734268.1;transl_table=11 NZ_CP100136.1 RefSeq gene 175281 176426 . - . ID=gene-NIV78_RS00850;Name=vioA;gbkey=Gene;gene=vioA;gene_biotype=protein_coding;locus_tag=NIV78_RS00850 NZ_CP100136.1 Protein Homology CDS 175281 176426 . - 0 ID=cds-WP_026051679.1;Parent=gene-NIV78_RS00850;Dbxref=Genbank:WP_026051679.1;Name=WP_026051679.1;gbkey=CDS;gene=vioA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696261.1;locus_tag=NIV78_RS00850;product=dTDP-4-amino-4%2C6-dideoxy-D-glucose aminotransferase VioA;protein_id=WP_026051679.1;transl_table=11 NZ_CP100136.1 RefSeq gene 176426 178798 . - . ID=gene-NIV78_RS00855;Name=NIV78_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00855 NZ_CP100136.1 Protein Homology CDS 176426 178798 . - 0 ID=cds-WP_251107214.1;Parent=gene-NIV78_RS00855;Dbxref=Genbank:WP_251107214.1;Name=WP_251107214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734270.1;locus_tag=NIV78_RS00855;product=tetratricopeptide repeat protein;protein_id=WP_251107214.1;transl_table=11 NZ_CP100136.1 RefSeq gene 179057 179365 . - . ID=gene-NIV78_RS00860;Name=NIV78_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00860 NZ_CP100136.1 Protein Homology CDS 179057 179365 . - 0 ID=cds-WP_230674527.1;Parent=gene-NIV78_RS00860;Dbxref=Genbank:WP_230674527.1;Name=WP_230674527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696263.1;locus_tag=NIV78_RS00860;product=flagellar protein FliT;protein_id=WP_230674527.1;transl_table=11 NZ_CP100136.1 RefSeq gene 179387 180943 . - . ID=gene-NIV78_RS00865;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=NIV78_RS00865 NZ_CP100136.1 Protein Homology CDS 179387 180943 . - 0 ID=cds-WP_012734272.1;Parent=gene-NIV78_RS00865;Dbxref=Genbank:WP_012734272.1;Name=WP_012734272.1;Ontology_term=GO:0007155,GO:0009288;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734272.1;locus_tag=NIV78_RS00865;product=flagellar filament capping protein FliD;protein_id=WP_012734272.1;transl_table=11 NZ_CP100136.1 RefSeq gene 181179 182333 . - . ID=gene-NIV78_RS00870;Name=NIV78_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00870 NZ_CP100136.1 Protein Homology CDS 181179 182333 . - 0 ID=cds-WP_012733690.1;Parent=gene-NIV78_RS00870;Dbxref=Genbank:WP_012733690.1;Name=WP_012733690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198207.1;locus_tag=NIV78_RS00870;product=flagellin;protein_id=WP_012733690.1;transl_table=11 NZ_CP100136.1 RefSeq gene 182926 183138 . + . ID=gene-NIV78_RS00875;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=NIV78_RS00875 NZ_CP100136.1 Protein Homology CDS 182926 183138 . + 0 ID=cds-WP_006401410.1;Parent=gene-NIV78_RS00875;Dbxref=Genbank:WP_006401410.1;Name=WP_006401410.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsU;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198205.1;locus_tag=NIV78_RS00875;product=30S ribosomal protein S21;protein_id=WP_006401410.1;transl_table=11 NZ_CP100136.1 RefSeq gene 183243 183944 . - . ID=gene-NIV78_RS00880;Name=NIV78_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00880 NZ_CP100136.1 Protein Homology CDS 183243 183944 . - 0 ID=cds-WP_169512242.1;Parent=gene-NIV78_RS00880;Dbxref=Genbank:WP_169512242.1;Name=WP_169512242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696266.1;locus_tag=NIV78_RS00880;product=DNA-3-methyladenine glycosylase I;protein_id=WP_169512242.1;transl_table=11 NZ_CP100136.1 RefSeq gene 184156 185058 . + . ID=gene-NIV78_RS00885;Name=NIV78_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00885 NZ_CP100136.1 Protein Homology CDS 184156 185058 . + 0 ID=cds-WP_251107215.1;Parent=gene-NIV78_RS00885;Dbxref=Genbank:WP_251107215.1;Name=WP_251107215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734274.1;locus_tag=NIV78_RS00885;product=ATPase;protein_id=WP_251107215.1;transl_table=11 NZ_CP100136.1 RefSeq gene 185142 185963 . + . ID=gene-NIV78_RS00890;Name=NIV78_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00890 NZ_CP100136.1 Protein Homology CDS 185142 185963 . + 0 ID=cds-WP_012734275.1;Parent=gene-NIV78_RS00890;Dbxref=Genbank:WP_012734275.1;Name=WP_012734275.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734275.1;locus_tag=NIV78_RS00890;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_012734275.1;transl_table=11 NZ_CP100136.1 RefSeq gene 186357 186653 . + . ID=gene-NIV78_RS00895;Name=NIV78_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00895 NZ_CP100136.1 Protein Homology CDS 186357 186653 . + 0 ID=cds-WP_012734276.1;Parent=gene-NIV78_RS00895;Dbxref=Genbank:WP_012734276.1;Name=WP_012734276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762906.1;locus_tag=NIV78_RS00895;product=H-NS histone family protein;protein_id=WP_012734276.1;transl_table=11 NZ_CP100136.1 RefSeq gene 186768 187832 . - . ID=gene-NIV78_RS00900;Name=NIV78_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00900 NZ_CP100136.1 Protein Homology CDS 186768 187832 . - 0 ID=cds-WP_012734277.1;Parent=gene-NIV78_RS00900;Dbxref=Genbank:WP_012734277.1;Name=WP_012734277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004536090.1;locus_tag=NIV78_RS00900;product=glycosyltransferase family 4 protein;protein_id=WP_012734277.1;transl_table=11 NZ_CP100136.1 RefSeq gene 188387 188707 . + . ID=gene-NIV78_RS00905;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=NIV78_RS00905 NZ_CP100136.1 Protein Homology CDS 188387 188707 . + 0 ID=cds-WP_043226645.1;Parent=gene-NIV78_RS00905;Dbxref=Genbank:WP_043226645.1;Name=WP_043226645.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198199.1;locus_tag=NIV78_RS00905;product=flagellar transcriptional regulator FlhD;protein_id=WP_043226645.1;transl_table=11 NZ_CP100136.1 RefSeq gene 188805 189371 . + . ID=gene-NIV78_RS00910;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=NIV78_RS00910 NZ_CP100136.1 Protein Homology CDS 188805 189371 . + 0 ID=cds-WP_012734279.1;Parent=gene-NIV78_RS00910;Dbxref=Genbank:WP_012734279.1;Name=WP_012734279.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734279.1;locus_tag=NIV78_RS00910;product=flagellar transcriptional regulator FlhC;protein_id=WP_012734279.1;transl_table=11 NZ_CP100136.1 RefSeq gene 189596 190456 . + . ID=gene-NIV78_RS00915;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=NIV78_RS00915 NZ_CP100136.1 Protein Homology CDS 189596 190456 . + 0 ID=cds-WP_012734280.1;Parent=gene-NIV78_RS00915;Dbxref=Genbank:WP_012734280.1;Name=WP_012734280.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013090904.1;locus_tag=NIV78_RS00915;product=flagellar motor stator protein MotA;protein_id=WP_012734280.1;transl_table=11 NZ_CP100136.1 RefSeq gene 190473 191522 . + . ID=gene-NIV78_RS00920;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=NIV78_RS00920 NZ_CP100136.1 Protein Homology CDS 190473 191522 . + 0 ID=cds-WP_012734281.1;Parent=gene-NIV78_RS00920;Dbxref=Genbank:WP_012734281.1;Name=WP_012734281.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734281.1;locus_tag=NIV78_RS00920;product=flagellar motor protein MotB;protein_id=WP_012734281.1;transl_table=11 NZ_CP100136.1 RefSeq gene 191544 191918 . + . ID=gene-NIV78_RS00925;Name=NIV78_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00925 NZ_CP100136.1 Protein Homology CDS 191544 191918 . + 0 ID=cds-WP_012734282.1;Parent=gene-NIV78_RS00925;Dbxref=Genbank:WP_012734282.1;Name=WP_012734282.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734282.1;locus_tag=NIV78_RS00925;product=response regulator;protein_id=WP_012734282.1;transl_table=11 NZ_CP100136.1 RefSeq gene 191985 194249 . + . ID=gene-NIV78_RS00930;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=NIV78_RS00930 NZ_CP100136.1 Protein Homology CDS 191985 194249 . + 0 ID=cds-WP_251107216.1;Parent=gene-NIV78_RS00930;Dbxref=Genbank:WP_251107216.1;Name=WP_251107216.1;Ontology_term=GO:0000160,GO:0006935,GO:0016310,GO:0000155;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734283.1;locus_tag=NIV78_RS00930;product=chemotaxis protein CheA;protein_id=WP_251107216.1;transl_table=11 NZ_CP100136.1 RefSeq gene 194284 194817 . + . ID=gene-NIV78_RS00935;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=NIV78_RS00935 NZ_CP100136.1 Protein Homology CDS 194284 194817 . + 0 ID=cds-WP_012734284.1;Parent=gene-NIV78_RS00935;Dbxref=Genbank:WP_012734284.1;Name=WP_012734284.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734284.1;locus_tag=NIV78_RS00935;product=chemotaxis protein CheW;protein_id=WP_012734284.1;transl_table=11 NZ_CP100136.1 RefSeq gene 194844 196856 . + . ID=gene-NIV78_RS00940;Name=NIV78_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00940 NZ_CP100136.1 Protein Homology CDS 194844 196856 . + 0 ID=cds-WP_251107217.1;Parent=gene-NIV78_RS00940;Dbxref=Genbank:WP_251107217.1;Name=WP_251107217.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011205290.1;locus_tag=NIV78_RS00940;product=methyl-accepting chemotaxis protein;protein_id=WP_251107217.1;transl_table=11 NZ_CP100136.1 RefSeq gene 196867 197838 . + . ID=gene-NIV78_RS00945;Name=NIV78_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00945 NZ_CP100136.1 Protein Homology CDS 196867 197838 . + 0 ID=cds-WP_012734286.1;Parent=gene-NIV78_RS00945;Dbxref=Genbank:WP_012734286.1;Name=WP_012734286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546711.1;locus_tag=NIV78_RS00945;product=chemotaxis protein CheR;protein_id=WP_012734286.1;transl_table=11 NZ_CP100136.1 RefSeq gene 197835 198530 . + . ID=gene-NIV78_RS00950;Name=cheD;gbkey=Gene;gene=cheD;gene_biotype=protein_coding;locus_tag=NIV78_RS00950 NZ_CP100136.1 Protein Homology CDS 197835 198530 . + 0 ID=cds-WP_012734287.1;Parent=gene-NIV78_RS00950;Dbxref=Genbank:WP_012734287.1;Name=WP_012734287.1;gbkey=CDS;gene=cheD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734287.1;locus_tag=NIV78_RS00950;product=chemoreceptor glutamine deamidase CheD;protein_id=WP_012734287.1;transl_table=11 NZ_CP100136.1 RefSeq gene 198536 199603 . + . ID=gene-NIV78_RS00955;Name=NIV78_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00955 NZ_CP100136.1 Protein Homology CDS 198536 199603 . + 0 ID=cds-WP_012734288.1;Parent=gene-NIV78_RS00955;Dbxref=Genbank:WP_012734288.1;Name=WP_012734288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722236.1;locus_tag=NIV78_RS00955;product=chemotaxis response regulator protein-glutamate methylesterase;protein_id=WP_012734288.1;transl_table=11 NZ_CP100136.1 RefSeq gene 199643 200038 . + . ID=gene-NIV78_RS00960;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=NIV78_RS00960 NZ_CP100136.1 Protein Homology CDS 199643 200038 . + 0 ID=cds-WP_012734289.1;Parent=gene-NIV78_RS00960;Dbxref=Genbank:WP_012734289.1;Name=WP_012734289.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754880.1;locus_tag=NIV78_RS00960;product=chemotaxis response regulator CheY;protein_id=WP_012734289.1;transl_table=11 NZ_CP100136.1 RefSeq gene 200040 200759 . + . ID=gene-NIV78_RS00965;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=NIV78_RS00965 NZ_CP100136.1 Protein Homology CDS 200040 200759 . + 0 ID=cds-WP_012734290.1;Parent=gene-NIV78_RS00965;Dbxref=Genbank:WP_012734290.1;Name=WP_012734290.1;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350602.1;locus_tag=NIV78_RS00965;product=protein phosphatase CheZ;protein_id=WP_012734290.1;transl_table=11 NZ_CP100136.1 RefSeq gene 201025 201543 . + . ID=gene-NIV78_RS00970;Name=NIV78_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00970 NZ_CP100136.1 Protein Homology CDS 201025 201543 . + 0 ID=cds-WP_012734291.1;Parent=gene-NIV78_RS00970;Dbxref=Genbank:WP_012734291.1;Name=WP_012734291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525697.1;locus_tag=NIV78_RS00970;product=DUF2844 domain-containing protein;protein_id=WP_012734291.1;transl_table=11 NZ_CP100136.1 RefSeq gene 201560 202837 . + . ID=gene-NIV78_RS00975;Name=NIV78_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00975 NZ_CP100136.1 Protein Homology CDS 201560 202837 . + 0 ID=cds-WP_017923756.1;Parent=gene-NIV78_RS00975;Dbxref=Genbank:WP_017923756.1;Name=WP_017923756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734292.1;locus_tag=NIV78_RS00975;product=DUF3443 domain-containing protein;protein_id=WP_017923756.1;transl_table=11 NZ_CP100136.1 RefSeq gene 203024 203554 . + . ID=gene-NIV78_RS00980;Name=NIV78_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS00980 NZ_CP100136.1 Protein Homology CDS 203024 203554 . + 0 ID=cds-WP_017923755.1;Parent=gene-NIV78_RS00980;Dbxref=Genbank:WP_017923755.1;Name=WP_017923755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734293.1;locus_tag=NIV78_RS00980;product=VOC family protein;protein_id=WP_017923755.1;transl_table=11 NZ_CP100136.1 RefSeq gene 203903 205129 . + . ID=gene-NIV78_RS00985;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=NIV78_RS00985 NZ_CP100136.1 Protein Homology CDS 203903 205129 . + 0 ID=cds-WP_100556214.1;Parent=gene-NIV78_RS00985;Dbxref=Genbank:WP_100556214.1;Name=WP_100556214.1;Ontology_term=GO:0001539;gbkey=CDS;gene=flhB;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734294.1;locus_tag=NIV78_RS00985;product=flagellar biosynthesis protein FlhB;protein_id=WP_100556214.1;transl_table=11 NZ_CP100136.1 RefSeq gene 205126 207228 . + . ID=gene-NIV78_RS00990;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=NIV78_RS00990 NZ_CP100136.1 Protein Homology CDS 205126 207228 . + 0 ID=cds-WP_012734295.1;Parent=gene-NIV78_RS00990;Dbxref=Genbank:WP_012734295.1;Name=WP_012734295.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=flhA;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602362.1;locus_tag=NIV78_RS00990;product=flagellar biosynthesis protein FlhA;protein_id=WP_012734295.1;transl_table=11 NZ_CP100136.1 RefSeq gene 207225 208949 . + . ID=gene-NIV78_RS00995;Name=flhF;gbkey=Gene;gene=flhF;gene_biotype=protein_coding;locus_tag=NIV78_RS00995 NZ_CP100136.1 Protein Homology CDS 207225 208949 . + 0 ID=cds-WP_251107218.1;Parent=gene-NIV78_RS00995;Dbxref=Genbank:WP_251107218.1;Name=WP_251107218.1;Ontology_term=GO:0006614,GO:0044781,GO:0003924,GO:0005525;gbkey=CDS;gene=flhF;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734296.1;locus_tag=NIV78_RS00995;product=flagellar biosynthesis protein FlhF;protein_id=WP_251107218.1;transl_table=11 NZ_CP100136.1 RefSeq gene 208942 209754 . + . ID=gene-NIV78_RS01000;Name=NIV78_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01000 NZ_CP100136.1 Protein Homology CDS 208942 209754 . + 0 ID=cds-WP_012734297.1;Parent=gene-NIV78_RS01000;Dbxref=Genbank:WP_012734297.1;Name=WP_012734297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734297.1;locus_tag=NIV78_RS01000;product=flagellar biosynthesis protein FlhG;protein_id=WP_012734297.1;transl_table=11 NZ_CP100136.1 RefSeq gene 209816 210541 . + . ID=gene-NIV78_RS01005;Name=NIV78_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01005 NZ_CP100136.1 Protein Homology CDS 209816 210541 . + 0 ID=cds-WP_012734298.1;Parent=gene-NIV78_RS01005;Dbxref=Genbank:WP_012734298.1;Name=WP_012734298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734298.1;locus_tag=NIV78_RS01005;product=RNA polymerase sigma factor FliA;protein_id=WP_012734298.1;transl_table=11 NZ_CP100136.1 cmsearch riboswitch 210669 210738 . + . ID=id-NZ_CP100136.1:210669..210738;Dbxref=RFAM:RF01057;Note=S-adenosyl-L-homocysteine riboswitch;bound_moiety=S-adenosyl-L-homocysteine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP100136.1 RefSeq gene 210839 212257 . + . ID=gene-NIV78_RS01010;Name=ahcY;gbkey=Gene;gene=ahcY;gene_biotype=protein_coding;locus_tag=NIV78_RS01010 NZ_CP100136.1 Protein Homology CDS 210839 212257 . + 0 ID=cds-WP_012734299.1;Parent=gene-NIV78_RS01010;Dbxref=Genbank:WP_012734299.1;Name=WP_012734299.1;Ontology_term=GO:0006730,GO:0004013;gbkey=CDS;gene=ahcY;go_function=adenosylhomocysteinase activity|0004013||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012434674.1;locus_tag=NIV78_RS01010;product=adenosylhomocysteinase;protein_id=WP_012734299.1;transl_table=11 NZ_CP100136.1 RefSeq gene 212403 212756 . + . ID=gene-NIV78_RS01015;Name=NIV78_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01015 NZ_CP100136.1 Protein Homology CDS 212403 212756 . + 0 ID=cds-WP_012734300.1;Parent=gene-NIV78_RS01015;Dbxref=Genbank:WP_012734300.1;Name=WP_012734300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009906537.1;locus_tag=NIV78_RS01015;product=phage holin family protein;protein_id=WP_012734300.1;transl_table=11 NZ_CP100136.1 RefSeq gene 212776 213606 . + . ID=gene-NIV78_RS01020;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=NIV78_RS01020 NZ_CP100136.1 Protein Homology CDS 212776 213606 . + 0 ID=cds-WP_012734301.1;Parent=gene-NIV78_RS01020;Dbxref=Genbank:WP_012734301.1;Name=WP_012734301.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734301.1;locus_tag=NIV78_RS01020;product=methylenetetrahydrofolate reductase [NAD(P)H];protein_id=WP_012734301.1;transl_table=11 NZ_CP100136.1 RefSeq gene 213754 215208 . - . ID=gene-NIV78_RS01025;Name=NIV78_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01025 NZ_CP100136.1 Protein Homology CDS 213754 215208 . - 0 ID=cds-WP_161521199.1;Parent=gene-NIV78_RS01025;Dbxref=Genbank:WP_161521199.1;Name=WP_161521199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895580.1;locus_tag=NIV78_RS01025;product=amidase;protein_id=WP_161521199.1;transl_table=11 NZ_CP100136.1 RefSeq gene 215318 216013 . - . ID=gene-NIV78_RS01030;Name=NIV78_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01030 NZ_CP100136.1 Protein Homology CDS 215318 216013 . - 0 ID=cds-WP_012734303.1;Parent=gene-NIV78_RS01030;Dbxref=Genbank:WP_012734303.1;Name=WP_012734303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009974414.1;locus_tag=NIV78_RS01030;product=dienelactone hydrolase family protein;protein_id=WP_012734303.1;transl_table=11 NZ_CP100136.1 RefSeq gene 216683 217825 . + . ID=gene-NIV78_RS01035;Name=NIV78_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01035 NZ_CP100136.1 Protein Homology CDS 216683 217825 . + 0 ID=cds-WP_012734304.1;Parent=gene-NIV78_RS01035;Dbxref=Genbank:WP_012734304.1;Name=WP_012734304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195762.1;locus_tag=NIV78_RS01035;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_012734304.1;transl_table=11 NZ_CP100136.1 RefSeq gene 217985 219100 . - . ID=gene-NIV78_RS01040;Name=NIV78_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01040 NZ_CP100136.1 Protein Homology CDS 217985 219100 . - 0 ID=cds-WP_251107219.1;Parent=gene-NIV78_RS01040;Dbxref=Genbank:WP_251107219.1;Name=WP_251107219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006023799.1;locus_tag=NIV78_RS01040;product=MFS transporter;protein_id=WP_251107219.1;transl_table=11 NZ_CP100136.1 RefSeq gene 219385 220059 . + . ID=gene-NIV78_RS01045;Name=NIV78_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01045 NZ_CP100136.1 Protein Homology CDS 219385 220059 . + 0 ID=cds-WP_017923167.1;Parent=gene-NIV78_RS01045;Dbxref=Genbank:WP_017923167.1;Name=WP_017923167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734306.1;locus_tag=NIV78_RS01045;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_017923167.1;transl_table=11 NZ_CP100136.1 RefSeq gene 220451 220744 . + . ID=gene-NIV78_RS01050;Name=NIV78_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01050 NZ_CP100136.1 Protein Homology CDS 220451 220744 . + 0 ID=cds-WP_012734307.1;Parent=gene-NIV78_RS01050;Dbxref=Genbank:WP_012734307.1;Name=WP_012734307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696300.1;locus_tag=NIV78_RS01050;product=H-NS histone family protein;protein_id=WP_012734307.1;transl_table=11 NZ_CP100136.1 RefSeq gene 221012 222172 . + . ID=gene-NIV78_RS01055;Name=NIV78_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01055 NZ_CP100136.1 Protein Homology CDS 221012 222172 . + 0 ID=cds-WP_017423938.1;Parent=gene-NIV78_RS01055;Dbxref=Genbank:WP_017423938.1;Name=WP_017423938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423938.1;locus_tag=NIV78_RS01055;product=cation diffusion facilitator family transporter;protein_id=WP_017423938.1;transl_table=11 NZ_CP100136.1 RefSeq gene 222227 222685 . - . ID=gene-NIV78_RS01060;Name=NIV78_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01060 NZ_CP100136.1 Protein Homology CDS 222227 222685 . - 0 ID=cds-WP_025101386.1;Parent=gene-NIV78_RS01060;Dbxref=Genbank:WP_025101386.1;Name=WP_025101386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008352298.1;locus_tag=NIV78_RS01060;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_025101386.1;transl_table=11 NZ_CP100136.1 RefSeq gene 222838 223452 . - . ID=gene-NIV78_RS01065;Name=NIV78_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01065 NZ_CP100136.1 Protein Homology CDS 222838 223452 . - 0 ID=cds-WP_012734310.1;Parent=gene-NIV78_RS01065;Dbxref=Genbank:WP_012734310.1;Name=WP_012734310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734310.1;locus_tag=NIV78_RS01065;product=exonuclease;protein_id=WP_012734310.1;transl_table=11 NZ_CP100136.1 RefSeq gene 223449 224096 . - . ID=gene-NIV78_RS01070;Name=NIV78_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01070 NZ_CP100136.1 Protein Homology CDS 223449 224096 . - 0 ID=cds-WP_012734311.1;Parent=gene-NIV78_RS01070;Dbxref=Genbank:WP_012734311.1;Name=WP_012734311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010107034.1;locus_tag=NIV78_RS01070;product=MBL fold metallo-hydrolase;protein_id=WP_012734311.1;transl_table=11 NZ_CP100136.1 RefSeq gene 224750 225379 . + . ID=gene-NIV78_RS01075;Name=NIV78_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01075 NZ_CP100136.1 Protein Homology CDS 224750 225379 . + 0 ID=cds-WP_017423939.1;Parent=gene-NIV78_RS01075;Dbxref=Genbank:WP_017423939.1;Name=WP_017423939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423939.1;locus_tag=NIV78_RS01075;product=septal ring lytic transglycosylase RlpA family protein;protein_id=WP_017423939.1;transl_table=11 NZ_CP100136.1 RefSeq gene 225544 226446 . - . ID=gene-NIV78_RS01080;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=NIV78_RS01080 NZ_CP100136.1 Protein Homology CDS 225544 226446 . - 0 ID=cds-WP_012734313.1;Parent=gene-NIV78_RS01080;Dbxref=Genbank:WP_012734313.1;Name=WP_012734313.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734313.1;locus_tag=NIV78_RS01080;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_012734313.1;transl_table=11 NZ_CP100136.1 RefSeq gene 226688 227095 . + . ID=gene-NIV78_RS01085;Name=NIV78_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01085 NZ_CP100136.1 Protein Homology CDS 226688 227095 . + 0 ID=cds-WP_026051505.1;Parent=gene-NIV78_RS01085;Dbxref=Genbank:WP_026051505.1;Name=WP_026051505.1;Ontology_term=GO:0003676,GO:0004518;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734314.1;locus_tag=NIV78_RS01085;product=YraN family protein;protein_id=WP_026051505.1;transl_table=11 NZ_CP100136.1 RefSeq gene 227258 227842 . + . ID=gene-NIV78_RS01090;Name=NIV78_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01090 NZ_CP100136.1 Protein Homology CDS 227258 227842 . + 0 ID=cds-WP_012734315.1;Parent=gene-NIV78_RS01090;Dbxref=Genbank:WP_012734315.1;Name=WP_012734315.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006023787.1;locus_tag=NIV78_RS01090;product=SIS domain-containing protein;protein_id=WP_012734315.1;transl_table=11 NZ_CP100136.1 RefSeq gene 227861 228673 . + . ID=gene-NIV78_RS01095;Name=NIV78_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01095 NZ_CP100136.1 Protein Homology CDS 227861 228673 . + 0 ID=cds-WP_017922969.1;Parent=gene-NIV78_RS01095;Dbxref=Genbank:WP_017922969.1;Name=WP_017922969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477384.1;locus_tag=NIV78_RS01095;product=BON domain-containing protein;protein_id=WP_017922969.1;transl_table=11 NZ_CP100136.1 RefSeq gene 228670 229035 . + . ID=gene-NIV78_RS01100;Name=NIV78_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01100 NZ_CP100136.1 Protein Homology CDS 228670 229035 . + 0 ID=cds-WP_012734317.1;Parent=gene-NIV78_RS01100;Dbxref=Genbank:WP_012734317.1;Name=WP_012734317.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734317.1;locus_tag=NIV78_RS01100;product=c-type cytochrome;protein_id=WP_012734317.1;transl_table=11 NZ_CP100136.1 RefSeq gene 229142 229217 . + . ID=gene-NIV78_RS01105;Name=NIV78_RS01105;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS01105 NZ_CP100136.1 tRNAscan-SE tRNA 229142 229217 . + . ID=rna-NIV78_RS01105;Parent=gene-NIV78_RS01105;anticodon=(pos:229175..229177);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS01105;product=tRNA-Ala NZ_CP100136.1 tRNAscan-SE exon 229142 229217 . + . ID=exon-NIV78_RS01105-1;Parent=rna-NIV78_RS01105;anticodon=(pos:229175..229177);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS01105;product=tRNA-Ala NZ_CP100136.1 RefSeq gene 229559 230647 . - . ID=gene-NIV78_RS01110;Name=NIV78_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01110 NZ_CP100136.1 Protein Homology CDS 229559 230647 . - 0 ID=cds-WP_017423941.1;Parent=gene-NIV78_RS01110;Dbxref=Genbank:WP_017423941.1;Name=WP_017423941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423941.1;locus_tag=NIV78_RS01110;product=diguanylate cyclase;protein_id=WP_017423941.1;transl_table=11 NZ_CP100136.1 RefSeq gene 231212 231613 . - . ID=gene-NIV78_RS01115;Name=NIV78_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01115 NZ_CP100136.1 Protein Homology CDS 231212 231613 . - 0 ID=cds-WP_026051506.1;Parent=gene-NIV78_RS01115;Dbxref=Genbank:WP_026051506.1;Name=WP_026051506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004524376.1;locus_tag=NIV78_RS01115;product=hypothetical protein;protein_id=WP_026051506.1;transl_table=11 NZ_CP100136.1 RefSeq gene 232070 233473 . + . ID=gene-NIV78_RS01120;Name=NIV78_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01120 NZ_CP100136.1 Protein Homology CDS 232070 233473 . + 0 ID=cds-WP_012734320.1;Parent=gene-NIV78_RS01120;Dbxref=Genbank:WP_012734320.1;Name=WP_012734320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401018.1;locus_tag=NIV78_RS01120;product=OFA family MFS transporter;protein_id=WP_012734320.1;transl_table=11 NZ_CP100136.1 RefSeq gene 233484 233627 . + . ID=gene-NIV78_RS01125;Name=NIV78_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01125 NZ_CP100136.1 Protein Homology CDS 233484 233627 . + 0 ID=cds-WP_012734321.1;Parent=gene-NIV78_RS01125;Dbxref=Genbank:WP_012734321.1;Name=WP_012734321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734321.1;locus_tag=NIV78_RS01125;product=hypothetical protein;protein_id=WP_012734321.1;transl_table=11 NZ_CP100136.1 RefSeq gene 233800 234669 . + . ID=gene-NIV78_RS01130;Name=NIV78_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01130 NZ_CP100136.1 Protein Homology CDS 233800 234669 . + 0 ID=cds-WP_012734322.1;Parent=gene-NIV78_RS01130;Dbxref=Genbank:WP_012734322.1;Name=WP_012734322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006023775.1;locus_tag=NIV78_RS01130;product=NAD(P)-dependent oxidoreductase;protein_id=WP_012734322.1;transl_table=11 NZ_CP100136.1 RefSeq gene 234732 235367 . + . ID=gene-NIV78_RS01135;Name=NIV78_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01135 NZ_CP100136.1 Protein Homology CDS 234732 235367 . + 0 ID=cds-WP_012734323.1;Parent=gene-NIV78_RS01135;Dbxref=Genbank:WP_012734323.1;Name=WP_012734323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757898.1;locus_tag=NIV78_RS01135;product=LysE family translocator;protein_id=WP_012734323.1;transl_table=11 NZ_CP100136.1 RefSeq gene 235596 236432 . - . ID=gene-NIV78_RS01140;Name=NIV78_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01140 NZ_CP100136.1 Protein Homology CDS 235596 236432 . - 0 ID=cds-WP_012734324.1;Parent=gene-NIV78_RS01140;Dbxref=Genbank:WP_012734324.1;Name=WP_012734324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752472.1;locus_tag=NIV78_RS01140;product=OmpW family protein;protein_id=WP_012734324.1;transl_table=11 NZ_CP100136.1 RefSeq gene 236449 237705 . - . ID=gene-NIV78_RS01145;Name=NIV78_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01145 NZ_CP100136.1 Protein Homology CDS 236449 237705 . - 0 ID=cds-WP_012734325.1;Parent=gene-NIV78_RS01145;Dbxref=Genbank:WP_012734325.1;Name=WP_012734325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523122.1;locus_tag=NIV78_RS01145;product=DUF2957 domain-containing protein;protein_id=WP_012734325.1;transl_table=11 NZ_CP100136.1 RefSeq gene 237790 238005 . - . ID=gene-NIV78_RS01150;Name=NIV78_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01150 NZ_CP100136.1 GeneMarkS-2+ CDS 237790 238005 . - 0 ID=cds-WP_017432182.1;Parent=gene-NIV78_RS01150;Dbxref=Genbank:WP_017432182.1;Name=WP_017432182.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS01150;product=hypothetical protein;protein_id=WP_017432182.1;transl_table=11 NZ_CP100136.1 RefSeq gene 238659 239606 . - . ID=gene-NIV78_RS01155;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=NIV78_RS01155 NZ_CP100136.1 Protein Homology CDS 238659 239606 . - 0 ID=cds-WP_012734326.1;Parent=gene-NIV78_RS01155;Dbxref=Genbank:WP_012734326.1;Name=WP_012734326.1;Ontology_term=GO:0006592,GO:0003942;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497427.1;locus_tag=NIV78_RS01155;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_012734326.1;transl_table=11 NZ_CP100136.1 RefSeq gene 239819 240415 . - . ID=gene-NIV78_RS01160;Name=NIV78_RS01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01160 NZ_CP100136.1 Protein Homology CDS 239819 240415 . - 0 ID=cds-WP_012734327.1;Parent=gene-NIV78_RS01160;Dbxref=Genbank:WP_012734327.1;Name=WP_012734327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734327.1;locus_tag=NIV78_RS01160;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_012734327.1;transl_table=11 NZ_CP100136.1 RefSeq gene 240709 241395 . - . ID=gene-NIV78_RS01165;Name=NIV78_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01165 NZ_CP100136.1 Protein Homology CDS 240709 241395 . - 0 ID=cds-WP_017924634.1;Parent=gene-NIV78_RS01165;Dbxref=Genbank:WP_017924634.1;Name=WP_017924634.1;Ontology_term=GO:0009116,GO:0004588;gbkey=CDS;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401311.1;locus_tag=NIV78_RS01165;product=orotate phosphoribosyltransferase;protein_id=WP_017924634.1;transl_table=11 NZ_CP100136.1 RefSeq gene 241855 244131 . + . ID=gene-NIV78_RS01170;Name=NIV78_RS01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01170 NZ_CP100136.1 Protein Homology CDS 241855 244131 . + 0 ID=cds-WP_012734329.1;Parent=gene-NIV78_RS01170;Dbxref=Genbank:WP_012734329.1;Name=WP_012734329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734329.1;locus_tag=NIV78_RS01170;product=NADP-dependent malic enzyme;protein_id=WP_012734329.1;transl_table=11 NZ_CP100136.1 RefSeq gene 244242 247829 . - . ID=gene-NIV78_RS01175;Name=NIV78_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01175 NZ_CP100136.1 Protein Homology CDS 244242 247829 . - 0 ID=cds-WP_017923133.1;Parent=gene-NIV78_RS01175;Dbxref=Genbank:WP_017923133.1;Name=WP_017923133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197902.1;locus_tag=NIV78_RS01175;product=indolepyruvate ferredoxin oxidoreductase family protein;protein_id=WP_017923133.1;transl_table=11 NZ_CP100136.1 RefSeq gene 248140 248322 . + . ID=gene-NIV78_RS01180;Name=NIV78_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01180 NZ_CP100136.1 Protein Homology CDS 248140 248322 . + 0 ID=cds-WP_012734331.1;Parent=gene-NIV78_RS01180;Dbxref=Genbank:WP_012734331.1;Name=WP_012734331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734331.1;locus_tag=NIV78_RS01180;product=hypothetical protein;protein_id=WP_012734331.1;transl_table=11 NZ_CP100136.1 RefSeq gene 248475 249572 . - . ID=gene-NIV78_RS01185;Name=hppD;gbkey=Gene;gene=hppD;gene_biotype=protein_coding;locus_tag=NIV78_RS01185 NZ_CP100136.1 Protein Homology CDS 248475 249572 . - 0 ID=cds-WP_257757120.1;Parent=gene-NIV78_RS01185;Dbxref=Genbank:WP_257757120.1;Name=WP_257757120.1;Ontology_term=GO:0006559,GO:0006572,GO:0003868;gbkey=CDS;gene=hppD;go_function=4-hydroxyphenylpyruvate dioxygenase activity|0003868||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497422.1;locus_tag=NIV78_RS01185;product=4-hydroxyphenylpyruvate dioxygenase;protein_id=WP_257757120.1;transl_table=11 NZ_CP100136.1 RefSeq gene 249739 250245 . + . ID=gene-NIV78_RS01190;Name=NIV78_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01190 NZ_CP100136.1 Protein Homology CDS 249739 250245 . + 0 ID=cds-WP_012734333.1;Parent=gene-NIV78_RS01190;Dbxref=Genbank:WP_012734333.1;Name=WP_012734333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009906479.1;locus_tag=NIV78_RS01190;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_012734333.1;transl_table=11 NZ_CP100136.1 RefSeq gene 250342 250989 . - . ID=gene-NIV78_RS01195;Name=NIV78_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01195 NZ_CP100136.1 Protein Homology CDS 250342 250989 . - 0 ID=cds-WP_026051342.1;Parent=gene-NIV78_RS01195;Dbxref=Genbank:WP_026051342.1;Name=WP_026051342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696340.1;locus_tag=NIV78_RS01195;product=GNAT family N-acetyltransferase;protein_id=WP_026051342.1;transl_table=11 NZ_CP100136.1 RefSeq gene 251220 251852 . - . ID=gene-NIV78_RS01200;Name=NIV78_RS01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01200 NZ_CP100136.1 Protein Homology CDS 251220 251852 . - 0 ID=cds-WP_012734335.1;Parent=gene-NIV78_RS01200;Dbxref=Genbank:WP_012734335.1;Name=WP_012734335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734335.1;locus_tag=NIV78_RS01200;product=TetR/AcrR family transcriptional regulator;protein_id=WP_012734335.1;transl_table=11 NZ_CP100136.1 RefSeq gene 251916 252737 . - . ID=gene-NIV78_RS01205;Name=NIV78_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01205 NZ_CP100136.1 Protein Homology CDS 251916 252737 . - 0 ID=cds-WP_251107220.1;Parent=gene-NIV78_RS01205;Dbxref=Genbank:WP_251107220.1;Name=WP_251107220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532477.1;locus_tag=NIV78_RS01205;product=DUF1835 domain-containing protein;protein_id=WP_251107220.1;transl_table=11 NZ_CP100136.1 RefSeq gene 252865 253953 . - . ID=gene-NIV78_RS01210;Name=paaK;gbkey=Gene;gene=paaK;gene_biotype=protein_coding;locus_tag=NIV78_RS01210 NZ_CP100136.1 Protein Homology CDS 252865 253953 . - 0 ID=cds-WP_012734337.1;Parent=gene-NIV78_RS01210;Dbxref=Genbank:WP_012734337.1;Name=WP_012734337.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaK;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255661.1;locus_tag=NIV78_RS01210;product=phenylacetate-CoA oxygenase/reductase subunit PaaK;protein_id=WP_012734337.1;transl_table=11 NZ_CP100136.1 RefSeq gene 253955 254551 . - . ID=gene-NIV78_RS01215;Name=paaJ;gbkey=Gene;gene=paaJ;gene_biotype=protein_coding;locus_tag=NIV78_RS01215 NZ_CP100136.1 Protein Homology CDS 253955 254551 . - 0 ID=cds-WP_017923469.1;Parent=gene-NIV78_RS01215;Dbxref=Genbank:WP_017923469.1;Name=WP_017923469.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaJ;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423184.1;locus_tag=NIV78_RS01215;product=phenylacetate-CoA oxygenase subunit PaaJ;protein_id=WP_017923469.1;transl_table=11 NZ_CP100136.1 RefSeq gene 254584 255390 . - . ID=gene-NIV78_RS01220;Name=paaC;gbkey=Gene;gene=paaC;gene_biotype=protein_coding;locus_tag=NIV78_RS01220 NZ_CP100136.1 Protein Homology CDS 254584 255390 . - 0 ID=cds-WP_012734339.1;Parent=gene-NIV78_RS01220;Dbxref=Genbank:WP_012734339.1;Name=WP_012734339.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaC;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009971143.1;locus_tag=NIV78_RS01220;product=phenylacetate-CoA oxygenase subunit PaaC;protein_id=WP_012734339.1;transl_table=11 NZ_CP100136.1 RefSeq gene 255398 255682 . - . ID=gene-NIV78_RS01225;Name=paaB;gbkey=Gene;gene=paaB;gene_biotype=protein_coding;locus_tag=NIV78_RS01225 NZ_CP100136.1 Protein Homology CDS 255398 255682 . - 0 ID=cds-WP_012734340.1;Parent=gene-NIV78_RS01225;Dbxref=Genbank:WP_012734340.1;Name=WP_012734340.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaB;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895631.1;locus_tag=NIV78_RS01225;product=1%2C2-phenylacetyl-CoA epoxidase subunit B;protein_id=WP_012734340.1;transl_table=11 NZ_CP100136.1 RefSeq gene 255721 256719 . - . ID=gene-NIV78_RS01230;Name=paaA;gbkey=Gene;gene=paaA;gene_biotype=protein_coding;locus_tag=NIV78_RS01230 NZ_CP100136.1 Protein Homology CDS 255721 256719 . - 0 ID=cds-WP_012734341.1;Parent=gene-NIV78_RS01230;Dbxref=Genbank:WP_012734341.1;Name=WP_012734341.1;Ontology_term=GO:0010124,GO:0097266;gbkey=CDS;gene=paaA;go_function=phenylacetyl-CoA 1%2C2-epoxidase activity|0097266||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006023750.1;locus_tag=NIV78_RS01230;product=1%2C2-phenylacetyl-CoA epoxidase subunit A;protein_id=WP_012734341.1;transl_table=11 NZ_CP100136.1 RefSeq gene 256906 258195 . + . ID=gene-NIV78_RS01235;Name=NIV78_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01235 NZ_CP100136.1 Protein Homology CDS 256906 258195 . + 0 ID=cds-WP_251107558.1;Parent=gene-NIV78_RS01235;Dbxref=Genbank:WP_251107558.1;Name=WP_251107558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734342.1;locus_tag=NIV78_RS01235;product=GDSL-type esterase/lipase family protein;protein_id=WP_251107558.1;transl_table=11 NZ_CP100136.1 RefSeq gene 258754 260286 . + . ID=gene-NIV78_RS01240;Name=NIV78_RS01240;gbkey=Gene;gene_biotype=rRNA;locus_tag=NIV78_RS01240 NZ_CP100136.1 cmsearch rRNA 258754 260286 . + . ID=rna-NIV78_RS01240;Parent=gene-NIV78_RS01240;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS01240;product=16S ribosomal RNA NZ_CP100136.1 cmsearch exon 258754 260286 . + . ID=exon-NIV78_RS01240-1;Parent=rna-NIV78_RS01240;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS01240;product=16S ribosomal RNA NZ_CP100136.1 RefSeq gene 260351 260427 . + . ID=gene-NIV78_RS01245;Name=NIV78_RS01245;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS01245 NZ_CP100136.1 tRNAscan-SE tRNA 260351 260427 . + . ID=rna-NIV78_RS01245;Parent=gene-NIV78_RS01245;anticodon=(pos:260385..260387);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS01245;product=tRNA-Ile NZ_CP100136.1 tRNAscan-SE exon 260351 260427 . + . ID=exon-NIV78_RS01245-1;Parent=rna-NIV78_RS01245;anticodon=(pos:260385..260387);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS01245;product=tRNA-Ile NZ_CP100136.1 RefSeq gene 260468 260543 . + . ID=gene-NIV78_RS01250;Name=NIV78_RS01250;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS01250 NZ_CP100136.1 tRNAscan-SE tRNA 260468 260543 . + . ID=rna-NIV78_RS01250;Parent=gene-NIV78_RS01250;anticodon=(pos:260501..260503);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS01250;product=tRNA-Ala NZ_CP100136.1 tRNAscan-SE exon 260468 260543 . + . ID=exon-NIV78_RS01250-1;Parent=rna-NIV78_RS01250;anticodon=(pos:260501..260503);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS01250;product=tRNA-Ala NZ_CP100136.1 RefSeq gene 260848 263727 . + . ID=gene-NIV78_RS01255;Name=NIV78_RS01255;gbkey=Gene;gene_biotype=rRNA;locus_tag=NIV78_RS01255 NZ_CP100136.1 cmsearch rRNA 260848 263727 . + . ID=rna-NIV78_RS01255;Parent=gene-NIV78_RS01255;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS01255;product=23S ribosomal RNA NZ_CP100136.1 cmsearch exon 260848 263727 . + . ID=exon-NIV78_RS01255-1;Parent=rna-NIV78_RS01255;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS01255;product=23S ribosomal RNA NZ_CP100136.1 RefSeq gene 263867 263980 . + . ID=gene-NIV78_RS01260;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=NIV78_RS01260 NZ_CP100136.1 cmsearch rRNA 263867 263980 . + . ID=rna-NIV78_RS01260;Parent=gene-NIV78_RS01260;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS01260;product=5S ribosomal RNA NZ_CP100136.1 cmsearch exon 263867 263980 . + . ID=exon-NIV78_RS01260-1;Parent=rna-NIV78_RS01260;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS01260;product=5S ribosomal RNA NZ_CP100136.1 RefSeq gene 264770 264855 . + . ID=gene-NIV78_RS01265;Name=NIV78_RS01265;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS01265 NZ_CP100136.1 tRNAscan-SE tRNA 264770 264855 . + . ID=rna-NIV78_RS01265;Parent=gene-NIV78_RS01265;anticodon=(pos:264804..264806);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS01265;product=tRNA-Tyr NZ_CP100136.1 tRNAscan-SE exon 264770 264855 . + . ID=exon-NIV78_RS01265-1;Parent=rna-NIV78_RS01265;anticodon=(pos:264804..264806);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS01265;product=tRNA-Tyr NZ_CP100136.1 RefSeq gene 264894 264967 . + . ID=gene-NIV78_RS01270;Name=NIV78_RS01270;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS01270 NZ_CP100136.1 tRNAscan-SE tRNA 264894 264967 . + . ID=rna-NIV78_RS01270;Parent=gene-NIV78_RS01270;anticodon=(pos:264926..264928);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS01270;product=tRNA-Gly NZ_CP100136.1 tRNAscan-SE exon 264894 264967 . + . ID=exon-NIV78_RS01270-1;Parent=rna-NIV78_RS01270;anticodon=(pos:264926..264928);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS01270;product=tRNA-Gly NZ_CP100136.1 RefSeq gene 264994 265068 . + . ID=gene-NIV78_RS01275;Name=NIV78_RS01275;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS01275 NZ_CP100136.1 tRNAscan-SE tRNA 264994 265068 . + . ID=rna-NIV78_RS01275;Parent=gene-NIV78_RS01275;anticodon=(pos:265026..265028);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS01275;product=tRNA-Thr NZ_CP100136.1 tRNAscan-SE exon 264994 265068 . + . ID=exon-NIV78_RS01275-1;Parent=rna-NIV78_RS01275;anticodon=(pos:265026..265028);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS01275;product=tRNA-Thr NZ_CP100136.1 RefSeq gene 265132 266322 . + . ID=gene-NIV78_RS01280;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=NIV78_RS01280 NZ_CP100136.1 Protein Homology CDS 265132 266322 . + 0 ID=cds-WP_012734343.1;Parent=gene-NIV78_RS01280;Dbxref=Genbank:WP_012734343.1;Name=WP_012734343.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011299314.1;locus_tag=NIV78_RS01280;product=elongation factor Tu;protein_id=WP_012734343.1;transl_table=11 NZ_CP100136.1 RefSeq gene 266380 266455 . + . ID=gene-NIV78_RS01285;Name=NIV78_RS01285;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS01285 NZ_CP100136.1 tRNAscan-SE tRNA 266380 266455 . + . ID=rna-NIV78_RS01285;Parent=gene-NIV78_RS01285;anticodon=(pos:266413..266415);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS01285;product=tRNA-Trp NZ_CP100136.1 tRNAscan-SE exon 266380 266455 . + . ID=exon-NIV78_RS01285-1;Parent=rna-NIV78_RS01285;anticodon=(pos:266413..266415);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS01285;product=tRNA-Trp NZ_CP100136.1 RefSeq gene 266495 266875 . + . ID=gene-NIV78_RS01290;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=NIV78_RS01290 NZ_CP100136.1 Protein Homology CDS 266495 266875 . + 0 ID=cds-WP_012734344.1;Parent=gene-NIV78_RS01290;Dbxref=Genbank:WP_012734344.1;Name=WP_012734344.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734344.1;locus_tag=NIV78_RS01290;product=preprotein translocase subunit SecE;protein_id=WP_012734344.1;transl_table=11 NZ_CP100136.1 RefSeq gene 266877 267434 . + . ID=gene-NIV78_RS01295;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=NIV78_RS01295 NZ_CP100136.1 Protein Homology CDS 266877 267434 . + 0 ID=cds-WP_012734345.1;Parent=gene-NIV78_RS01295;Dbxref=Genbank:WP_012734345.1;Name=WP_012734345.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusG;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013434764.1;locus_tag=NIV78_RS01295;product=transcription termination/antitermination protein NusG;protein_id=WP_012734345.1;transl_table=11 NZ_CP100136.1 RefSeq gene 267578 268009 . + . ID=gene-NIV78_RS01300;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=NIV78_RS01300 NZ_CP100136.1 Protein Homology CDS 267578 268009 . + 0 ID=cds-WP_012734346.1;Parent=gene-NIV78_RS01300;Dbxref=Genbank:WP_012734346.1;Name=WP_012734346.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplK;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012251786.1;locus_tag=NIV78_RS01300;product=50S ribosomal protein L11;protein_id=WP_012734346.1;transl_table=11 NZ_CP100136.1 RefSeq gene 268010 268708 . + . ID=gene-NIV78_RS01305;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=NIV78_RS01305 NZ_CP100136.1 Protein Homology CDS 268010 268708 . + 0 ID=cds-WP_012734347.1;Parent=gene-NIV78_RS01305;Dbxref=Genbank:WP_012734347.1;Name=WP_012734347.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplA;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407020.1;locus_tag=NIV78_RS01305;product=50S ribosomal protein L1;protein_id=WP_012734347.1;transl_table=11 NZ_CP100136.1 RefSeq gene 269008 269505 . + . ID=gene-NIV78_RS01310;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=NIV78_RS01310 NZ_CP100136.1 Protein Homology CDS 269008 269505 . + 0 ID=cds-WP_012734348.1;Parent=gene-NIV78_RS01310;Dbxref=Genbank:WP_012734348.1;Name=WP_012734348.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898361.1;locus_tag=NIV78_RS01310;product=50S ribosomal protein L10;protein_id=WP_012734348.1;transl_table=11 NZ_CP100136.1 RefSeq gene 269566 269940 . + . ID=gene-NIV78_RS01315;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=NIV78_RS01315 NZ_CP100136.1 Protein Homology CDS 269566 269940 . + 0 ID=cds-WP_012734349.1;Parent=gene-NIV78_RS01315;Dbxref=Genbank:WP_012734349.1;Name=WP_012734349.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplL;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006029839.1;locus_tag=NIV78_RS01315;product=50S ribosomal protein L7/L12;protein_id=WP_012734349.1;transl_table=11 NZ_CP100136.1 RefSeq gene 270312 274421 . + . ID=gene-NIV78_RS01320;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=NIV78_RS01320 NZ_CP100136.1 Protein Homology CDS 270312 274421 . + 0 ID=cds-WP_017423778.1;Parent=gene-NIV78_RS01320;Dbxref=Genbank:WP_017423778.1;Name=WP_017423778.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoB;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006029840.1;locus_tag=NIV78_RS01320;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_017423778.1;transl_table=11 NZ_CP100136.1 RefSeq gene 274443 278708 . + . ID=gene-NIV78_RS01325;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=NIV78_RS01325 NZ_CP100136.1 Protein Homology CDS 274443 278708 . + 0 ID=cds-WP_012734351.1;Parent=gene-NIV78_RS01325;Dbxref=Genbank:WP_012734351.1;Name=WP_012734351.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoC;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734351.1;locus_tag=NIV78_RS01325;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_012734351.1;transl_table=11 NZ_CP100136.1 RefSeq gene 278740 278922 . + . ID=gene-NIV78_RS01330;Name=NIV78_RS01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01330 NZ_CP100136.1 GeneMarkS-2+ CDS 278740 278922 . + 0 ID=cds-WP_127913972.1;Parent=gene-NIV78_RS01330;Dbxref=Genbank:WP_127913972.1;Name=WP_127913972.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS01330;product=hypothetical protein;protein_id=WP_127913972.1;transl_table=11 NZ_CP100136.1 RefSeq gene 279072 279665 . + . ID=gene-NIV78_RS01335;Name=NIV78_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01335 NZ_CP100136.1 Protein Homology CDS 279072 279665 . + 0 ID=cds-WP_017423779.1;Parent=gene-NIV78_RS01335;Dbxref=Genbank:WP_017423779.1;Name=WP_017423779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423779.1;locus_tag=NIV78_RS01335;product=hypothetical protein;protein_id=WP_017423779.1;transl_table=11 NZ_CP100136.1 RefSeq gene 279690 281537 . + . ID=gene-NIV78_RS01340;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=NIV78_RS01340 NZ_CP100136.1 Protein Homology CDS 279690 281537 . + 0 ID=cds-WP_012734352.1;Parent=gene-NIV78_RS01340;Dbxref=Genbank:WP_012734352.1;Name=WP_012734352.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696366.1;locus_tag=NIV78_RS01340;product=DNA helicase RecQ;protein_id=WP_012734352.1;transl_table=11 NZ_CP100136.1 RefSeq gene 281817 282197 . + . ID=gene-NIV78_RS01345;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=NIV78_RS01345 NZ_CP100136.1 Protein Homology CDS 281817 282197 . + 0 ID=cds-WP_012734353.1;Parent=gene-NIV78_RS01345;Dbxref=Genbank:WP_012734353.1;Name=WP_012734353.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsL;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006998493.1;locus_tag=NIV78_RS01345;product=30S ribosomal protein S12;protein_id=WP_012734353.1;transl_table=11 NZ_CP100136.1 RefSeq gene 282371 282841 . + . ID=gene-NIV78_RS01350;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=NIV78_RS01350 NZ_CP100136.1 Protein Homology CDS 282371 282841 . + 0 ID=cds-WP_004198359.1;Parent=gene-NIV78_RS01350;Dbxref=Genbank:WP_004198359.1;Name=WP_004198359.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsG;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008649176.1;locus_tag=NIV78_RS01350;product=30S ribosomal protein S7;protein_id=WP_004198359.1;transl_table=11 NZ_CP100136.1 RefSeq gene 282961 285063 . + . ID=gene-NIV78_RS01355;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=NIV78_RS01355 NZ_CP100136.1 Protein Homology CDS 282961 285063 . + 0 ID=cds-WP_012734354.1;Parent=gene-NIV78_RS01355;Dbxref=Genbank:WP_012734354.1;Name=WP_012734354.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482929.1;locus_tag=NIV78_RS01355;product=elongation factor G;protein_id=WP_012734354.1;transl_table=11 NZ_CP100136.1 RefSeq gene 285107 286297 . + . ID=gene-NIV78_RS01360;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=NIV78_RS01360 NZ_CP100136.1 Protein Homology CDS 285107 286297 . + 0 ID=cds-WP_012734343.1-2;Parent=gene-NIV78_RS01360;Dbxref=Genbank:WP_012734343.1;Name=WP_012734343.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011299314.1;locus_tag=NIV78_RS01360;product=elongation factor Tu;protein_id=WP_012734343.1;transl_table=11 NZ_CP100136.1 RefSeq gene 286443 286754 . + . ID=gene-NIV78_RS01365;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=NIV78_RS01365 NZ_CP100136.1 Protein Homology CDS 286443 286754 . + 0 ID=cds-WP_012734355.1;Parent=gene-NIV78_RS01365;Dbxref=Genbank:WP_012734355.1;Name=WP_012734355.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199280.1;locus_tag=NIV78_RS01365;product=30S ribosomal protein S10;protein_id=WP_012734355.1;transl_table=11 NZ_CP100136.1 RefSeq gene 286941 287591 . + . ID=gene-NIV78_RS01370;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=NIV78_RS01370 NZ_CP100136.1 Protein Homology CDS 286941 287591 . + 0 ID=cds-WP_251107221.1;Parent=gene-NIV78_RS01370;Dbxref=Genbank:WP_251107221.1;Name=WP_251107221.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212557.1;locus_tag=NIV78_RS01370;product=50S ribosomal protein L3;protein_id=WP_251107221.1;transl_table=11 NZ_CP100136.1 RefSeq gene 287591 288211 . + . ID=gene-NIV78_RS01375;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=NIV78_RS01375 NZ_CP100136.1 Protein Homology CDS 287591 288211 . + 0 ID=cds-WP_012734357.1;Parent=gene-NIV78_RS01375;Dbxref=Genbank:WP_012734357.1;Name=WP_012734357.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350675.1;locus_tag=NIV78_RS01375;product=50S ribosomal protein L4;protein_id=WP_012734357.1;transl_table=11 NZ_CP100136.1 RefSeq gene 288208 288522 . + . ID=gene-NIV78_RS01380;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=NIV78_RS01380 NZ_CP100136.1 Protein Homology CDS 288208 288522 . + 0 ID=cds-WP_012734358.1;Parent=gene-NIV78_RS01380;Dbxref=Genbank:WP_012734358.1;Name=WP_012734358.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008343846.1;locus_tag=NIV78_RS01380;product=50S ribosomal protein L23;protein_id=WP_012734358.1;transl_table=11 NZ_CP100136.1 RefSeq gene 288525 289352 . + . ID=gene-NIV78_RS01385;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=NIV78_RS01385 NZ_CP100136.1 Protein Homology CDS 288525 289352 . + 0 ID=cds-WP_012734359.1;Parent=gene-NIV78_RS01385;Dbxref=Genbank:WP_012734359.1;Name=WP_012734359.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplB;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009770933.1;locus_tag=NIV78_RS01385;product=50S ribosomal protein L2;protein_id=WP_012734359.1;transl_table=11 NZ_CP100136.1 RefSeq gene 289363 289638 . + . ID=gene-NIV78_RS01390;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=NIV78_RS01390 NZ_CP100136.1 Protein Homology CDS 289363 289638 . + 0 ID=cds-WP_004199273.1;Parent=gene-NIV78_RS01390;Dbxref=Genbank:WP_004199273.1;Name=WP_004199273.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsS;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018440478.1;locus_tag=NIV78_RS01390;product=30S ribosomal protein S19;protein_id=WP_004199273.1;transl_table=11 NZ_CP100136.1 RefSeq gene 289651 289980 . + . ID=gene-NIV78_RS01395;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=NIV78_RS01395 NZ_CP100136.1 Protein Homology CDS 289651 289980 . + 0 ID=cds-WP_004199272.1;Parent=gene-NIV78_RS01395;Dbxref=Genbank:WP_004199272.1;Name=WP_004199272.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplV;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018420150.1;locus_tag=NIV78_RS01395;product=50S ribosomal protein L22;protein_id=WP_004199272.1;transl_table=11 NZ_CP100136.1 RefSeq gene 289992 290792 . + . ID=gene-NIV78_RS01400;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=NIV78_RS01400 NZ_CP100136.1 Protein Homology CDS 289992 290792 . + 0 ID=cds-WP_012734360.1;Parent=gene-NIV78_RS01400;Dbxref=Genbank:WP_012734360.1;Name=WP_012734360.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsC;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185240.1;locus_tag=NIV78_RS01400;product=30S ribosomal protein S3;protein_id=WP_012734360.1;transl_table=11 NZ_CP100136.1 RefSeq gene 290795 291211 . + . ID=gene-NIV78_RS01405;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=NIV78_RS01405 NZ_CP100136.1 Protein Homology CDS 290795 291211 . + 0 ID=cds-WP_012734361.1;Parent=gene-NIV78_RS01405;Dbxref=Genbank:WP_012734361.1;Name=WP_012734361.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplP;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013340739.1;locus_tag=NIV78_RS01405;product=50S ribosomal protein L16;protein_id=WP_012734361.1;transl_table=11 NZ_CP100136.1 RefSeq gene 291221 291415 . + . ID=gene-NIV78_RS01410;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=NIV78_RS01410 NZ_CP100136.1 Protein Homology CDS 291221 291415 . + 0 ID=cds-WP_004199856.1;Parent=gene-NIV78_RS01410;Dbxref=Genbank:WP_004199856.1;Name=WP_004199856.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmC;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199856.1;locus_tag=NIV78_RS01410;product=50S ribosomal protein L29;protein_id=WP_004199856.1;transl_table=11 NZ_CP100136.1 RefSeq gene 291412 291684 . + . ID=gene-NIV78_RS01415;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=NIV78_RS01415 NZ_CP100136.1 Protein Homology CDS 291412 291684 . + 0 ID=cds-WP_012734362.1;Parent=gene-NIV78_RS01415;Dbxref=Genbank:WP_012734362.1;Name=WP_012734362.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004634482.1;locus_tag=NIV78_RS01415;product=30S ribosomal protein S17;protein_id=WP_012734362.1;transl_table=11 NZ_CP100136.1 RefSeq gene 291986 292354 . + . ID=gene-NIV78_RS01420;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=NIV78_RS01420 NZ_CP100136.1 Protein Homology CDS 291986 292354 . + 0 ID=cds-WP_004197951.1;Parent=gene-NIV78_RS01420;Dbxref=Genbank:WP_004197951.1;Name=WP_004197951.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplN;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009124801.1;locus_tag=NIV78_RS01420;product=50S ribosomal protein L14;protein_id=WP_004197951.1;transl_table=11 NZ_CP100136.1 RefSeq gene 292364 292669 . + . ID=gene-NIV78_RS01425;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=NIV78_RS01425 NZ_CP100136.1 Protein Homology CDS 292364 292669 . + 0 ID=cds-WP_012734363.1;Parent=gene-NIV78_RS01425;Dbxref=Genbank:WP_012734363.1;Name=WP_012734363.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplX;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696373.1;locus_tag=NIV78_RS01425;product=50S ribosomal protein L24;protein_id=WP_012734363.1;transl_table=11 NZ_CP100136.1 RefSeq gene 292684 293223 . + . ID=gene-NIV78_RS01430;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=NIV78_RS01430 NZ_CP100136.1 Protein Homology CDS 292684 293223 . + 0 ID=cds-WP_012734364.1;Parent=gene-NIV78_RS01430;Dbxref=Genbank:WP_012734364.1;Name=WP_012734364.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007875323.1;locus_tag=NIV78_RS01430;product=50S ribosomal protein L5;protein_id=WP_012734364.1;transl_table=11 NZ_CP100136.1 RefSeq gene 293231 293536 . + . ID=gene-NIV78_RS01435;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=NIV78_RS01435 NZ_CP100136.1 Protein Homology CDS 293231 293536 . + 0 ID=cds-WP_012734365.1;Parent=gene-NIV78_RS01435;Dbxref=Genbank:WP_012734365.1;Name=WP_012734365.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197948.1;locus_tag=NIV78_RS01435;product=30S ribosomal protein S14;protein_id=WP_012734365.1;transl_table=11 NZ_CP100136.1 RefSeq gene 293551 293946 . + . ID=gene-NIV78_RS01440;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=NIV78_RS01440 NZ_CP100136.1 Protein Homology CDS 293551 293946 . + 0 ID=cds-WP_012734366.1;Parent=gene-NIV78_RS01440;Dbxref=Genbank:WP_012734366.1;Name=WP_012734366.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011799763.1;locus_tag=NIV78_RS01440;product=30S ribosomal protein S8;protein_id=WP_012734366.1;transl_table=11 NZ_CP100136.1 RefSeq gene 293965 294495 . + . ID=gene-NIV78_RS01445;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=NIV78_RS01445 NZ_CP100136.1 Protein Homology CDS 293965 294495 . + 0 ID=cds-WP_012734367.1;Parent=gene-NIV78_RS01445;Dbxref=Genbank:WP_012734367.1;Name=WP_012734367.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0022625;gbkey=CDS;gene=rplF;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734367.1;locus_tag=NIV78_RS01445;product=50S ribosomal protein L6;protein_id=WP_012734367.1;transl_table=11 NZ_CP100136.1 RefSeq gene 294508 294873 . + . ID=gene-NIV78_RS01450;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=NIV78_RS01450 NZ_CP100136.1 Protein Homology CDS 294508 294873 . + 0 ID=cds-WP_012734368.1;Parent=gene-NIV78_RS01450;Dbxref=Genbank:WP_012734368.1;Name=WP_012734368.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplR;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013434799.1;locus_tag=NIV78_RS01450;product=50S ribosomal protein L18;protein_id=WP_012734368.1;transl_table=11 NZ_CP100136.1 RefSeq gene 294887 295405 . + . ID=gene-NIV78_RS01455;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=NIV78_RS01455 NZ_CP100136.1 Protein Homology CDS 294887 295405 . + 0 ID=cds-WP_012734369.1;Parent=gene-NIV78_RS01455;Dbxref=Genbank:WP_012734369.1;Name=WP_012734369.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsE;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011002906.1;locus_tag=NIV78_RS01455;product=30S ribosomal protein S5;protein_id=WP_012734369.1;transl_table=11 NZ_CP100136.1 RefSeq gene 295421 295603 . + . ID=gene-NIV78_RS01460;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=NIV78_RS01460 NZ_CP100136.1 Protein Homology CDS 295421 295603 . + 0 ID=cds-WP_010106952.1;Parent=gene-NIV78_RS01460;Dbxref=Genbank:WP_010106952.1;Name=WP_010106952.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmD;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106952.1;locus_tag=NIV78_RS01460;product=50S ribosomal protein L30;protein_id=WP_010106952.1;transl_table=11 NZ_CP100136.1 RefSeq gene 295631 296065 . + . ID=gene-NIV78_RS01465;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=NIV78_RS01465 NZ_CP100136.1 Protein Homology CDS 295631 296065 . + 0 ID=cds-WP_012734371.1;Parent=gene-NIV78_RS01465;Dbxref=Genbank:WP_012734371.1;Name=WP_012734371.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplO;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197941.1;locus_tag=NIV78_RS01465;product=50S ribosomal protein L15;protein_id=WP_012734371.1;transl_table=11 NZ_CP100136.1 RefSeq gene 296109 297455 . + . ID=gene-NIV78_RS01470;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=NIV78_RS01470 NZ_CP100136.1 Protein Homology CDS 296109 297455 . + 0 ID=cds-WP_012734372.1;Parent=gene-NIV78_RS01470;Dbxref=Genbank:WP_012734372.1;Name=WP_012734372.1;Ontology_term=GO:0043952,GO:0015450,GO:0005887;gbkey=CDS;gene=secY;go_component=integral component of plasma membrane|0005887||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018440464.1;locus_tag=NIV78_RS01470;product=preprotein translocase subunit SecY;protein_id=WP_012734372.1;transl_table=11 NZ_CP100136.1 RefSeq gene 297465 297683 . + . ID=gene-NIV78_RS01475;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=NIV78_RS01475 NZ_CP100136.1 Protein Homology CDS 297465 297683 . + 0 ID=cds-WP_012734373.1;Parent=gene-NIV78_RS01475;Dbxref=Genbank:WP_012734373.1;Name=WP_012734373.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018149800.1;locus_tag=NIV78_RS01475;product=translation initiation factor IF-1;protein_id=WP_012734373.1;transl_table=11 NZ_CP100136.1 RefSeq gene 297704 297820 . + . ID=gene-NIV78_RS01480;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=NIV78_RS01480 NZ_CP100136.1 Protein Homology CDS 297704 297820 . + 0 ID=cds-WP_004199844.1;Parent=gene-NIV78_RS01480;Dbxref=Genbank:WP_004199844.1;Name=WP_004199844.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199844.1;locus_tag=NIV78_RS01480;product=50S ribosomal protein L36;protein_id=WP_004199844.1;transl_table=11 NZ_CP100136.1 RefSeq gene 297859 298224 . + . ID=gene-NIV78_RS01485;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=NIV78_RS01485 NZ_CP100136.1 Protein Homology CDS 297859 298224 . + 0 ID=cds-WP_012734375.1;Parent=gene-NIV78_RS01485;Dbxref=Genbank:WP_012734375.1;Name=WP_012734375.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;gene=rpsM;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018440462.1;locus_tag=NIV78_RS01485;product=30S ribosomal protein S13;protein_id=WP_012734375.1;transl_table=11 NZ_CP100136.1 RefSeq gene 298248 298649 . + . ID=gene-NIV78_RS01490;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=NIV78_RS01490 NZ_CP100136.1 Protein Homology CDS 298248 298649 . + 0 ID=cds-WP_012734376.1;Parent=gene-NIV78_RS01490;Dbxref=Genbank:WP_012734376.1;Name=WP_012734376.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106947.1;locus_tag=NIV78_RS01490;product=30S ribosomal protein S11;protein_id=WP_012734376.1;transl_table=11 NZ_CP100136.1 RefSeq gene 298797 299420 . + . ID=gene-NIV78_RS01495;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=NIV78_RS01495 NZ_CP100136.1 Protein Homology CDS 298797 299420 . + 0 ID=cds-WP_012734377.1;Parent=gene-NIV78_RS01495;Dbxref=Genbank:WP_012734377.1;Name=WP_012734377.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009888438.1;locus_tag=NIV78_RS01495;product=30S ribosomal protein S4;protein_id=WP_012734377.1;transl_table=11 NZ_CP100136.1 RefSeq gene 299543 300520 . + . ID=gene-NIV78_RS01500;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=NIV78_RS01500 NZ_CP100136.1 Protein Homology CDS 299543 300520 . + 0 ID=cds-WP_012734378.1;Parent=gene-NIV78_RS01500;Dbxref=Genbank:WP_012734378.1;Name=WP_012734378.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;gene=rpoA;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018440459.1;locus_tag=NIV78_RS01500;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_012734378.1;transl_table=11 NZ_CP100136.1 RefSeq gene 300667 301059 . + . ID=gene-NIV78_RS01505;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=NIV78_RS01505 NZ_CP100136.1 Protein Homology CDS 300667 301059 . + 0 ID=cds-WP_012734379.1;Parent=gene-NIV78_RS01505;Dbxref=Genbank:WP_012734379.1;Name=WP_012734379.1;Ontology_term=GO:0006412,GO:0003735,GO:0005762,GO:0022625;gbkey=CDS;gene=rplQ;go_component=mitochondrial large ribosomal subunit|0005762||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477175.1;locus_tag=NIV78_RS01505;product=50S ribosomal protein L17;protein_id=WP_012734379.1;transl_table=11 NZ_CP100136.1 RefSeq gene 301192 301518 . + . ID=gene-NIV78_RS01510;Name=NIV78_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01510 NZ_CP100136.1 Protein Homology CDS 301192 301518 . + 0 ID=cds-WP_012734380.1;Parent=gene-NIV78_RS01510;Dbxref=Genbank:WP_012734380.1;Name=WP_012734380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199838.1;locus_tag=NIV78_RS01510;product=divalent-cation tolerance protein CutA;protein_id=WP_012734380.1;transl_table=11 NZ_CP100136.1 RefSeq gene 301511 303439 . + . ID=gene-NIV78_RS01515;Name=dsbD;gbkey=Gene;gene=dsbD;gene_biotype=protein_coding;locus_tag=NIV78_RS01515 NZ_CP100136.1 Protein Homology CDS 301511 303439 . + 0 ID=cds-WP_100556272.1;Parent=gene-NIV78_RS01515;Dbxref=Genbank:WP_100556272.1;Name=WP_100556272.1;Ontology_term=GO:0047134;gbkey=CDS;gene=dsbD;go_function=protein-disulfide reductase (NAD(P)) activity|0047134||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734381.1;locus_tag=NIV78_RS01515;product=protein-disulfide reductase DsbD;protein_id=WP_100556272.1;transl_table=11 NZ_CP100136.1 RefSeq gene 303526 304524 . - . ID=gene-NIV78_RS01520;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=NIV78_RS01520 NZ_CP100136.1 Protein Homology CDS 303526 304524 . - 0 ID=cds-WP_012734382.1;Parent=gene-NIV78_RS01520;Dbxref=Genbank:WP_012734382.1;Name=WP_012734382.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009913842.1;locus_tag=NIV78_RS01520;product=porphobilinogen synthase;protein_id=WP_012734382.1;transl_table=11 NZ_CP100136.1 RefSeq gene 304770 305429 . - . ID=gene-NIV78_RS01525;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=NIV78_RS01525 NZ_CP100136.1 Protein Homology CDS 304770 305429 . - 0 ID=cds-WP_017424371.1;Parent=gene-NIV78_RS01525;Dbxref=Genbank:WP_017424371.1;Name=WP_017424371.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521909.1;locus_tag=NIV78_RS01525;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_017424371.1;transl_table=11 NZ_CP100136.1 RefSeq gene 305682 306335 . + . ID=gene-NIV78_RS01530;Name=NIV78_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01530 NZ_CP100136.1 Protein Homology CDS 305682 306335 . + 0 ID=cds-WP_043225951.1;Parent=gene-NIV78_RS01530;Dbxref=Genbank:WP_043225951.1;Name=WP_043225951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012434559.1;locus_tag=NIV78_RS01530;product=cytochrome c4;protein_id=WP_043225951.1;transl_table=11 NZ_CP100136.1 RefSeq gene 306462 308642 . + . ID=gene-NIV78_RS01535;Name=NIV78_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01535 NZ_CP100136.1 Protein Homology CDS 306462 308642 . + 0 ID=cds-WP_012734385.1;Parent=gene-NIV78_RS01535;Dbxref=Genbank:WP_012734385.1;Name=WP_012734385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424373.1;locus_tag=NIV78_RS01535;product=cytochrome c biogenesis protein ResB;protein_id=WP_012734385.1;transl_table=11 NZ_CP100136.1 RefSeq gene 308647 309843 . + . ID=gene-NIV78_RS01540;Name=ccsB;gbkey=Gene;gene=ccsB;gene_biotype=protein_coding;locus_tag=NIV78_RS01540 NZ_CP100136.1 Protein Homology CDS 308647 309843 . + 0 ID=cds-WP_012734386.1;Parent=gene-NIV78_RS01540;Dbxref=Genbank:WP_012734386.1;Name=WP_012734386.1;Ontology_term=GO:0017004,GO:0020037;gbkey=CDS;gene=ccsB;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655767.1;locus_tag=NIV78_RS01540;product=c-type cytochrome biogenesis protein CcsB;protein_id=WP_012734386.1;transl_table=11 NZ_CP100136.1 RefSeq gene 310010 311002 . + . ID=gene-NIV78_RS01545;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=NIV78_RS01545 NZ_CP100136.1 Protein Homology CDS 310010 311002 . + 0 ID=cds-WP_012734387.1;Parent=gene-NIV78_RS01545;Dbxref=Genbank:WP_012734387.1;Name=WP_012734387.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009913838.1;locus_tag=NIV78_RS01545;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_012734387.1;transl_table=11 NZ_CP100136.1 RefSeq gene 311046 311696 . + . ID=gene-NIV78_RS01550;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=NIV78_RS01550 NZ_CP100136.1 Protein Homology CDS 311046 311696 . + 0 ID=cds-WP_230674338.1;Parent=gene-NIV78_RS01550;Dbxref=Genbank:WP_230674338.1;Name=WP_230674338.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734388.1;locus_tag=NIV78_RS01550;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_230674338.1;transl_table=11 NZ_CP100136.1 RefSeq gene 311782 313053 . - . ID=gene-NIV78_RS01555;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=NIV78_RS01555 NZ_CP100136.1 Protein Homology CDS 311782 313053 . - 0 ID=cds-WP_017923471.1;Parent=gene-NIV78_RS01555;Dbxref=Genbank:WP_017923471.1;Name=WP_017923471.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734389.1;locus_tag=NIV78_RS01555;product=diaminopimelate decarboxylase;protein_id=WP_017923471.1;transl_table=11 NZ_CP100136.1 RefSeq gene 313060 313332 . - . ID=gene-NIV78_RS01560;Name=NIV78_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01560 NZ_CP100136.1 Protein Homology CDS 313060 313332 . - 0 ID=cds-WP_012734390.1;Parent=gene-NIV78_RS01560;Dbxref=Genbank:WP_012734390.1;Name=WP_012734390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734390.1;locus_tag=NIV78_RS01560;product=lipoprotein;protein_id=WP_012734390.1;transl_table=11 NZ_CP100136.1 RefSeq gene 313369 313695 . + . ID=gene-NIV78_RS01565;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=NIV78_RS01565 NZ_CP100136.1 Protein Homology CDS 313369 313695 . + 0 ID=cds-WP_012734391.1;Parent=gene-NIV78_RS01565;Dbxref=Genbank:WP_012734391.1;Name=WP_012734391.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196764.1;locus_tag=NIV78_RS01565;product=iron donor protein CyaY;protein_id=WP_012734391.1;transl_table=11 NZ_CP100136.1 RefSeq gene 313777 316218 . - . ID=gene-NIV78_RS01570;Name=NIV78_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01570 NZ_CP100136.1 Protein Homology CDS 313777 316218 . - 0 ID=cds-WP_012734392.1;Parent=gene-NIV78_RS01570;Dbxref=Genbank:WP_012734392.1;Name=WP_012734392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734392.1;locus_tag=NIV78_RS01570;product=penicillin-binding protein 1A;protein_id=WP_012734392.1;transl_table=11 NZ_CP100136.1 RefSeq gene 316404 317351 . + . ID=gene-NIV78_RS01575;Name=pilM;gbkey=Gene;gene=pilM;gene_biotype=protein_coding;locus_tag=NIV78_RS01575 NZ_CP100136.1 Protein Homology CDS 316404 317351 . + 0 ID=cds-WP_251107222.1;Parent=gene-NIV78_RS01575;Dbxref=Genbank:WP_251107222.1;Name=WP_251107222.1;gbkey=CDS;gene=pilM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734393.1;locus_tag=NIV78_RS01575;product=pilus assembly protein PilM;protein_id=WP_251107222.1;transl_table=11 NZ_CP100136.1 RefSeq gene 317348 318034 . + . ID=gene-NIV78_RS01580;Name=NIV78_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01580 NZ_CP100136.1 Protein Homology CDS 317348 318034 . + 0 ID=cds-WP_251107223.1;Parent=gene-NIV78_RS01580;Dbxref=Genbank:WP_251107223.1;Name=WP_251107223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734394.1;locus_tag=NIV78_RS01580;product=pilus assembly protein PilN;protein_id=WP_251107223.1;transl_table=11 NZ_CP100136.1 RefSeq gene 318067 319152 . + . ID=gene-NIV78_RS01585;Name=NIV78_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01585 NZ_CP100136.1 GeneMarkS-2+ CDS 318067 319152 . + 0 ID=cds-WP_251107224.1;Parent=gene-NIV78_RS01585;Dbxref=Genbank:WP_251107224.1;Name=WP_251107224.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS01585;product=hypothetical protein;protein_id=WP_251107224.1;transl_table=11 NZ_CP100136.1 RefSeq gene 319211 320962 . + . ID=gene-NIV78_RS01590;Name=pilQ;gbkey=Gene;gene=pilQ;gene_biotype=protein_coding;locus_tag=NIV78_RS01590 NZ_CP100136.1 Protein Homology CDS 319211 320962 . + 0 ID=cds-WP_251107559.1;Parent=gene-NIV78_RS01590;Dbxref=Genbank:WP_251107559.1;Name=WP_251107559.1;Ontology_term=GO:0009297,GO:0009306;gbkey=CDS;gene=pilQ;go_process=pilus assembly|0009297||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734396.1;locus_tag=NIV78_RS01590;product=type IV pilus secretin PilQ;protein_id=WP_251107559.1;transl_table=11 NZ_CP100136.1 RefSeq gene 321050 321604 . + . ID=gene-NIV78_RS01595;Name=NIV78_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01595 NZ_CP100136.1 Protein Homology CDS 321050 321604 . + 0 ID=cds-WP_035979999.1;Parent=gene-NIV78_RS01595;Dbxref=Genbank:WP_035979999.1;Name=WP_035979999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492299.1;locus_tag=NIV78_RS01595;product=shikimate kinase;protein_id=WP_035979999.1;transl_table=11 NZ_CP100136.1 RefSeq gene 321601 322680 . + . ID=gene-NIV78_RS01600;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=NIV78_RS01600 NZ_CP100136.1 Protein Homology CDS 321601 322680 . + 0 ID=cds-WP_017924287.1;Parent=gene-NIV78_RS01600;Dbxref=Genbank:WP_017924287.1;Name=WP_017924287.1;Ontology_term=GO:0009423,GO:0003856;gbkey=CDS;gene=aroB;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004545609.1;locus_tag=NIV78_RS01600;product=3-dehydroquinate synthase;protein_id=WP_017924287.1;transl_table=11 NZ_CP100136.1 RefSeq gene 322918 324030 . + . ID=gene-NIV78_RS01605;Name=NIV78_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01605 NZ_CP100136.1 Protein Homology CDS 322918 324030 . + 0 ID=cds-WP_251107560.1;Parent=gene-NIV78_RS01605;Dbxref=Genbank:WP_251107560.1;Name=WP_251107560.1;Ontology_term=GO:0016793;gbkey=CDS;go_function=triphosphoric monoester hydrolase activity|0016793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492300.1;locus_tag=NIV78_RS01605;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=WP_251107560.1;transl_table=11 NZ_CP100136.1 RefSeq gene 324126 325451 . + . ID=gene-NIV78_RS01610;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=NIV78_RS01610 NZ_CP100136.1 Protein Homology CDS 324126 325451 . + 0 ID=cds-WP_017923688.1;Parent=gene-NIV78_RS01610;Dbxref=Genbank:WP_017923688.1;Name=WP_017923688.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734400.1;locus_tag=NIV78_RS01610;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WP_017923688.1;transl_table=11 NZ_CP100136.1 RefSeq gene 325512 326402 . + . ID=gene-NIV78_RS01615;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=NIV78_RS01615 NZ_CP100136.1 Protein Homology CDS 325512 326402 . + 0 ID=cds-WP_017923687.1;Parent=gene-NIV78_RS01615;Dbxref=Genbank:WP_017923687.1;Name=WP_017923687.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734401.1;locus_tag=NIV78_RS01615;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WP_017923687.1;transl_table=11 NZ_CP100136.1 RefSeq gene 326399 327244 . + . ID=gene-NIV78_RS01620;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=NIV78_RS01620 NZ_CP100136.1 Protein Homology CDS 326399 327244 . + 0 ID=cds-WP_017423387.1;Parent=gene-NIV78_RS01620;Dbxref=Genbank:WP_017423387.1;Name=WP_017423387.1;Ontology_term=GO:0015794,GO:0005887,GO:0055052;gbkey=CDS;gene=ugpE;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477155.1;locus_tag=NIV78_RS01620;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WP_017423387.1;transl_table=11 NZ_CP100136.1 RefSeq gene 327272 328357 . + . ID=gene-NIV78_RS01625;Name=NIV78_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01625 NZ_CP100136.1 Protein Homology CDS 327272 328357 . + 0 ID=cds-WP_012734403.1;Parent=gene-NIV78_RS01625;Dbxref=Genbank:WP_012734403.1;Name=WP_012734403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212578.1;locus_tag=NIV78_RS01625;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;protein_id=WP_012734403.1;transl_table=11 NZ_CP100136.1 RefSeq gene 328425 329204 . + . ID=gene-NIV78_RS01630;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=NIV78_RS01630 NZ_CP100136.1 Protein Homology CDS 328425 329204 . + 0 ID=cds-WP_251107225.1;Parent=gene-NIV78_RS01630;Dbxref=Genbank:WP_251107225.1;Name=WP_251107225.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734404.1;locus_tag=NIV78_RS01630;product=glycerophosphodiester phosphodiesterase;protein_id=WP_251107225.1;transl_table=11 NZ_CP100136.1 RefSeq gene 329350 330081 . - . ID=gene-NIV78_RS01635;Name=NIV78_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01635 NZ_CP100136.1 Protein Homology CDS 329350 330081 . - 0 ID=cds-WP_012734405.1;Parent=gene-NIV78_RS01635;Dbxref=Genbank:WP_012734405.1;Name=WP_012734405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011402559.1;locus_tag=NIV78_RS01635;product=outer membrane beta-barrel protein;protein_id=WP_012734405.1;transl_table=11 NZ_CP100136.1 RefSeq gene 330274 331002 . + . ID=gene-NIV78_RS01640;Name=NIV78_RS01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01640 NZ_CP100136.1 Protein Homology CDS 330274 331002 . + 0 ID=cds-WP_012734406.1;Parent=gene-NIV78_RS01640;Dbxref=Genbank:WP_012734406.1;Name=WP_012734406.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734406.1;locus_tag=NIV78_RS01640;product=transposase;protein_id=WP_012734406.1;transl_table=11 NZ_CP100136.1 RefSeq gene 331273 335973 . + . ID=gene-NIV78_RS01645;Name=NIV78_RS01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01645 NZ_CP100136.1 Protein Homology CDS 331273 335973 . + 0 ID=cds-WP_012734407.1;Parent=gene-NIV78_RS01645;Dbxref=Genbank:WP_012734407.1;Name=WP_012734407.1;Ontology_term=GO:0006537,GO:0015930,GO:0016638;gbkey=CDS;go_function=glutamate synthase activity|0015930||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors|0016638||IEA;go_process=glutamate biosynthetic process|0006537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477150.1;locus_tag=NIV78_RS01645;product=glutamate synthase-related protein;protein_id=WP_012734407.1;transl_table=11 NZ_CP100136.1 RefSeq gene 336078 337544 . + . ID=gene-NIV78_RS01650;Name=NIV78_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01650 NZ_CP100136.1 Protein Homology CDS 336078 337544 . + 0 ID=cds-WP_017922999.1;Parent=gene-NIV78_RS01650;Dbxref=Genbank:WP_017922999.1;Name=WP_017922999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016346426.1;locus_tag=NIV78_RS01650;product=glutamate synthase subunit beta;protein_id=WP_017922999.1;transl_table=11 NZ_CP100136.1 RefSeq gene 337635 339383 . - . ID=gene-NIV78_RS01655;Name=NIV78_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01655 NZ_CP100136.1 Protein Homology CDS 337635 339383 . - 0 ID=cds-WP_012734409.1;Parent=gene-NIV78_RS01655;Dbxref=Genbank:WP_012734409.1;Name=WP_012734409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734409.1;locus_tag=NIV78_RS01655;product=ABC transporter ATP-binding protein/permease;protein_id=WP_012734409.1;transl_table=11 NZ_CP100136.1 cmsearch riboswitch 339739 339875 . + . ID=id-NZ_CP100136.1:339739..339875;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP100136.1 RefSeq gene 340098 341264 . + . ID=gene-NIV78_RS01660;Name=NIV78_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01660 NZ_CP100136.1 Protein Homology CDS 340098 341264 . + 0 ID=cds-WP_251107227.1;Parent=gene-NIV78_RS01660;Dbxref=Genbank:WP_251107227.1;Name=WP_251107227.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423384.1;locus_tag=NIV78_RS01660;product=FAD-dependent oxidoreductase;protein_id=WP_251107227.1;transl_table=11 NZ_CP100136.1 RefSeq gene 341293 341490 . + . ID=gene-NIV78_RS01665;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=NIV78_RS01665 NZ_CP100136.1 Protein Homology CDS 341293 341490 . + 0 ID=cds-WP_012734411.1;Parent=gene-NIV78_RS01665;Dbxref=Genbank:WP_012734411.1;Name=WP_012734411.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009888501.1;locus_tag=NIV78_RS01665;product=sulfur carrier protein ThiS;protein_id=WP_012734411.1;transl_table=11 NZ_CP100136.1 RefSeq gene 341539 342354 . + . ID=gene-NIV78_RS01670;Name=NIV78_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01670 NZ_CP100136.1 Protein Homology CDS 341539 342354 . + 0 ID=cds-WP_012734412.1;Parent=gene-NIV78_RS01670;Dbxref=Genbank:WP_012734412.1;Name=WP_012734412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734412.1;locus_tag=NIV78_RS01670;product=thiazole synthase;protein_id=WP_012734412.1;transl_table=11 NZ_CP100136.1 RefSeq gene 342351 343448 . + . ID=gene-NIV78_RS01675;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=NIV78_RS01675 NZ_CP100136.1 Protein Homology CDS 342351 343448 . + 0 ID=cds-WP_100556277.1;Parent=gene-NIV78_RS01675;Dbxref=Genbank:WP_100556277.1;Name=WP_100556277.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734413.1;locus_tag=NIV78_RS01675;product=thiamine phosphate synthase;protein_id=WP_100556277.1;transl_table=11 NZ_CP100136.1 RefSeq gene 343753 344571 . + . ID=gene-NIV78_RS01680;Name=NIV78_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01680 NZ_CP100136.1 Protein Homology CDS 343753 344571 . + 0 ID=cds-WP_012734414.1;Parent=gene-NIV78_RS01680;Dbxref=Genbank:WP_012734414.1;Name=WP_012734414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106887.1;locus_tag=NIV78_RS01680;product=ABC transporter ATP-binding protein;protein_id=WP_012734414.1;transl_table=11 NZ_CP100136.1 RefSeq gene 344568 345335 . + . ID=gene-NIV78_RS01685;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=NIV78_RS01685 NZ_CP100136.1 Protein Homology CDS 344568 345335 . + 0 ID=cds-WP_012734415.1;Parent=gene-NIV78_RS01685;Dbxref=Genbank:WP_012734415.1;Name=WP_012734415.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734415.1;locus_tag=NIV78_RS01685;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_012734415.1;transl_table=11 NZ_CP100136.1 RefSeq gene 345352 345858 . + . ID=gene-NIV78_RS01690;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=NIV78_RS01690 NZ_CP100136.1 Protein Homology CDS 345352 345858 . + 0 ID=cds-WP_012734416.1;Parent=gene-NIV78_RS01690;Dbxref=Genbank:WP_012734416.1;Name=WP_012734416.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734416.1;locus_tag=NIV78_RS01690;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_012734416.1;transl_table=11 NZ_CP100136.1 RefSeq gene 345923 346909 . + . ID=gene-NIV78_RS01695;Name=NIV78_RS01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01695 NZ_CP100136.1 Protein Homology CDS 345923 346909 . + 0 ID=cds-WP_012734417.1;Parent=gene-NIV78_RS01695;Dbxref=Genbank:WP_012734417.1;Name=WP_012734417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734417.1;locus_tag=NIV78_RS01695;product=VacJ family lipoprotein;protein_id=WP_012734417.1;transl_table=11 NZ_CP100136.1 RefSeq gene 347017 347643 . + . ID=gene-NIV78_RS01700;Name=NIV78_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01700 NZ_CP100136.1 Protein Homology CDS 347017 347643 . + 0 ID=cds-WP_012734418.1;Parent=gene-NIV78_RS01700;Dbxref=Genbank:WP_012734418.1;Name=WP_012734418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106880.1;locus_tag=NIV78_RS01700;product=ABC transporter substrate-binding protein;protein_id=WP_012734418.1;transl_table=11 NZ_CP100136.1 RefSeq gene 347640 347909 . + . ID=gene-NIV78_RS01705;Name=NIV78_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01705 NZ_CP100136.1 Protein Homology CDS 347640 347909 . + 0 ID=cds-WP_012734419.1;Parent=gene-NIV78_RS01705;Dbxref=Genbank:WP_012734419.1;Name=WP_012734419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602125.1;locus_tag=NIV78_RS01705;product=STAS domain-containing protein;protein_id=WP_012734419.1;transl_table=11 NZ_CP100136.1 RefSeq gene 348091 349017 . + . ID=gene-NIV78_RS01710;Name=NIV78_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01710 NZ_CP100136.1 Protein Homology CDS 348091 349017 . + 0 ID=cds-WP_020381404.1;Parent=gene-NIV78_RS01710;Dbxref=Genbank:WP_020381404.1;Name=WP_020381404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004554063.1;locus_tag=NIV78_RS01710;product=ABC transporter ATP-binding protein;protein_id=WP_020381404.1;transl_table=11 NZ_CP100136.1 RefSeq gene 349014 349769 . + . ID=gene-NIV78_RS01715;Name=NIV78_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01715 NZ_CP100136.1 Protein Homology CDS 349014 349769 . + 0 ID=cds-WP_012734421.1;Parent=gene-NIV78_RS01715;Dbxref=Genbank:WP_012734421.1;Name=WP_012734421.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696427.1;locus_tag=NIV78_RS01715;product=ABC transporter permease;protein_id=WP_012734421.1;transl_table=11 NZ_CP100136.1 RefSeq gene 349793 350032 . + . ID=gene-NIV78_RS01720;Name=NIV78_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01720 NZ_CP100136.1 Protein Homology CDS 349793 350032 . + 0 ID=cds-WP_012734422.1;Parent=gene-NIV78_RS01720;Dbxref=Genbank:WP_012734422.1;Name=WP_012734422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006029348.1;locus_tag=NIV78_RS01720;product=BolA family transcriptional regulator;protein_id=WP_012734422.1;transl_table=11 NZ_CP100136.1 RefSeq gene 350049 351395 . + . ID=gene-NIV78_RS01725;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=NIV78_RS01725 NZ_CP100136.1 Protein Homology CDS 350049 351395 . + 0 ID=cds-WP_012734423.1;Parent=gene-NIV78_RS01725;Dbxref=Genbank:WP_012734423.1;Name=WP_012734423.1;Ontology_term=GO:0009252,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041492724.1;locus_tag=NIV78_RS01725;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_012734423.1;transl_table=11 NZ_CP100136.1 RefSeq gene 351392 352048 . + . ID=gene-NIV78_RS01730;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=NIV78_RS01730 NZ_CP100136.1 Protein Homology CDS 351392 352048 . + 0 ID=cds-WP_012734424.1;Parent=gene-NIV78_RS01730;Dbxref=Genbank:WP_012734424.1;Name=WP_012734424.1;Ontology_term=GO:0000105,GO:0003879;gbkey=CDS;gene=hisG;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009932070.1;locus_tag=NIV78_RS01730;product=ATP phosphoribosyltransferase;protein_id=WP_012734424.1;transl_table=11 NZ_CP100136.1 RefSeq gene 352089 353414 . + . ID=gene-NIV78_RS01735;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=NIV78_RS01735 NZ_CP100136.1 Protein Homology CDS 352089 353414 . + 0 ID=cds-WP_012734425.1;Parent=gene-NIV78_RS01735;Dbxref=Genbank:WP_012734425.1;Name=WP_012734425.1;Ontology_term=GO:0000105,GO:0004399;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734425.1;locus_tag=NIV78_RS01735;product=histidinol dehydrogenase;protein_id=WP_012734425.1;transl_table=11 NZ_CP100136.1 RefSeq gene 353565 354635 . + . ID=gene-NIV78_RS01740;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=NIV78_RS01740 NZ_CP100136.1 Protein Homology CDS 353565 354635 . + 0 ID=cds-WP_012734426.1;Parent=gene-NIV78_RS01740;Dbxref=Genbank:WP_012734426.1;Name=WP_012734426.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018433810.1;locus_tag=NIV78_RS01740;product=histidinol-phosphate transaminase;protein_id=WP_012734426.1;transl_table=11 NZ_CP100136.1 RefSeq gene 354712 355299 . + . ID=gene-NIV78_RS01745;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=NIV78_RS01745 NZ_CP100136.1 Protein Homology CDS 354712 355299 . + 0 ID=cds-WP_017424222.1;Parent=gene-NIV78_RS01745;Dbxref=Genbank:WP_017424222.1;Name=WP_017424222.1;Ontology_term=GO:0000105,GO:0004424;gbkey=CDS;gene=hisB;go_function=imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400582.1;locus_tag=NIV78_RS01745;product=imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_017424222.1;transl_table=11 NZ_CP100136.1 RefSeq gene 355397 356017 . + . ID=gene-NIV78_RS01750;Name=NIV78_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01750 NZ_CP100136.1 Protein Homology CDS 355397 356017 . + 0 ID=cds-WP_012734428.1;Parent=gene-NIV78_RS01750;Dbxref=Genbank:WP_012734428.1;Name=WP_012734428.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010092886.1;locus_tag=NIV78_RS01750;product=NAAT family transporter;protein_id=WP_012734428.1;transl_table=11 NZ_CP100136.1 RefSeq gene 356014 356655 . + . ID=gene-NIV78_RS01755;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=NIV78_RS01755 NZ_CP100136.1 Protein Homology CDS 356014 356655 . + 0 ID=cds-WP_012734429.1;Parent=gene-NIV78_RS01755;Dbxref=Genbank:WP_012734429.1;Name=WP_012734429.1;Ontology_term=GO:0000105,GO:0000107,GO:0016884;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA,carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007180210.1;locus_tag=NIV78_RS01755;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_012734429.1;transl_table=11 NZ_CP100136.1 RefSeq gene 356820 357575 . + . ID=gene-NIV78_RS01760;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=NIV78_RS01760 NZ_CP100136.1 Protein Homology CDS 356820 357575 . + 0 ID=cds-WP_012734430.1;Parent=gene-NIV78_RS01760;Dbxref=Genbank:WP_012734430.1;Name=WP_012734430.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883057.1;locus_tag=NIV78_RS01760;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_012734430.1;transl_table=11 NZ_CP100136.1 RefSeq gene 357660 358433 . + . ID=gene-NIV78_RS01765;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=NIV78_RS01765 NZ_CP100136.1 Protein Homology CDS 357660 358433 . + 0 ID=cds-WP_012734431.1;Parent=gene-NIV78_RS01765;Dbxref=Genbank:WP_012734431.1;Name=WP_012734431.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012362933.1;locus_tag=NIV78_RS01765;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_012734431.1;transl_table=11 NZ_CP100136.1 RefSeq gene 358436 358855 . + . ID=gene-NIV78_RS01770;Name=hisI;gbkey=Gene;gene=hisI;gene_biotype=protein_coding;locus_tag=NIV78_RS01770 NZ_CP100136.1 Protein Homology CDS 358436 358855 . + 0 ID=cds-WP_012734432.1;Parent=gene-NIV78_RS01770;Dbxref=Genbank:WP_012734432.1;Name=WP_012734432.1;Ontology_term=GO:0000105,GO:0004635;gbkey=CDS;gene=hisI;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734432.1;locus_tag=NIV78_RS01770;product=phosphoribosyl-AMP cyclohydrolase;protein_id=WP_012734432.1;transl_table=11 NZ_CP100136.1 RefSeq gene 358852 359217 . + . ID=gene-NIV78_RS01775;Name=NIV78_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01775 NZ_CP100136.1 Protein Homology CDS 358852 359217 . + 0 ID=cds-WP_012734433.1;Parent=gene-NIV78_RS01775;Dbxref=Genbank:WP_012734433.1;Name=WP_012734433.1;Ontology_term=GO:0000105,GO:0004636;gbkey=CDS;go_function=phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883060.1;locus_tag=NIV78_RS01775;product=phosphoribosyl-ATP diphosphatase;protein_id=WP_012734433.1;transl_table=11 NZ_CP100136.1 RefSeq gene 359264 359680 . + . ID=gene-NIV78_RS01780;Name=NIV78_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01780 NZ_CP100136.1 Protein Homology CDS 359264 359680 . + 0 ID=cds-WP_012734434.1;Parent=gene-NIV78_RS01780;Dbxref=Genbank:WP_012734434.1;Name=WP_012734434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734434.1;locus_tag=NIV78_RS01780;product=membrane protein;protein_id=WP_012734434.1;transl_table=11 NZ_CP100136.1 RefSeq gene 359712 360077 . + . ID=gene-NIV78_RS01785;Name=NIV78_RS01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01785 NZ_CP100136.1 Protein Homology CDS 359712 360077 . + 0 ID=cds-WP_012734435.1;Parent=gene-NIV78_RS01785;Dbxref=Genbank:WP_012734435.1;Name=WP_012734435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185206.1;locus_tag=NIV78_RS01785;product=histidine triad nucleotide-binding protein;protein_id=WP_012734435.1;transl_table=11 NZ_CP100136.1 RefSeq gene 360200 360433 . + . ID=gene-NIV78_RS01790;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=NIV78_RS01790 NZ_CP100136.1 Protein Homology CDS 360200 360433 . + 0 ID=cds-WP_012734436.1;Parent=gene-NIV78_RS01790;Dbxref=Genbank:WP_012734436.1;Name=WP_012734436.1;Ontology_term=GO:0043953,GO:0016021;gbkey=CDS;gene=tatA;go_component=integral component of membrane|0016021||IEA;go_process=protein transport by the Tat complex|0043953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477115.1;locus_tag=NIV78_RS01790;product=Sec-independent protein translocase subunit TatA;protein_id=WP_012734436.1;transl_table=11 NZ_CP100136.1 RefSeq gene 360460 361002 . + . ID=gene-NIV78_RS01795;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=NIV78_RS01795 NZ_CP100136.1 Protein Homology CDS 360460 361002 . + 0 ID=cds-WP_012734437.1;Parent=gene-NIV78_RS01795;Dbxref=Genbank:WP_012734437.1;Name=WP_012734437.1;Ontology_term=GO:0015031,GO:0015628;gbkey=CDS;gene=tatB;go_process=protein transport|0015031||IEA,protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477114.1;locus_tag=NIV78_RS01795;product=Sec-independent protein translocase protein TatB;protein_id=WP_012734437.1;transl_table=11 NZ_CP100136.1 RefSeq gene 361056 361838 . + . ID=gene-NIV78_RS01800;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=NIV78_RS01800 NZ_CP100136.1 Protein Homology CDS 361056 361838 . + 0 ID=cds-WP_012734438.1;Parent=gene-NIV78_RS01800;Dbxref=Genbank:WP_012734438.1;Name=WP_012734438.1;Ontology_term=GO:0015628,GO:0005887;gbkey=CDS;gene=tatC;go_component=integral component of plasma membrane|0005887||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734438.1;locus_tag=NIV78_RS01800;product=twin-arginine translocase subunit TatC;protein_id=WP_012734438.1;transl_table=11 NZ_CP100136.1 RefSeq gene 362152 363357 . - . ID=gene-NIV78_RS01805;Name=NIV78_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01805 NZ_CP100136.1 Protein Homology CDS 362152 363357 . - 0 ID=cds-WP_012734439.1;Parent=gene-NIV78_RS01805;Dbxref=Genbank:WP_012734439.1;Name=WP_012734439.1;Ontology_term=GO:0006508,GO:0006950,GO:0004252,GO:0005515,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751792.1;locus_tag=NIV78_RS01805;product=Do family serine endopeptidase;protein_id=WP_012734439.1;transl_table=11 NZ_CP100136.1 RefSeq gene 363379 364125 . + . ID=gene-NIV78_RS01810;Name=NIV78_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01810 NZ_CP100136.1 Protein Homology CDS 363379 364125 . + 0 ID=cds-WP_012734440.1;Parent=gene-NIV78_RS01810;Dbxref=Genbank:WP_012734440.1;Name=WP_012734440.1;Ontology_term=GO:0008150,GO:0051540,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=metal cluster binding|0051540||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009906350.1;locus_tag=NIV78_RS01810;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_012734440.1;transl_table=11 NZ_CP100136.1 RefSeq gene 364345 364965 . + . ID=gene-NIV78_RS01815;Name=petA;gbkey=Gene;gene=petA;gene_biotype=protein_coding;locus_tag=NIV78_RS01815 NZ_CP100136.1 Protein Homology CDS 364345 364965 . + 0 ID=cds-WP_012734441.1;Parent=gene-NIV78_RS01815;Dbxref=Genbank:WP_012734441.1;Name=WP_012734441.1;Ontology_term=GO:0009060,GO:0008121,GO:0009055,GO:0045275;gbkey=CDS;gene=petA;go_component=respiratory chain complex III|0045275||IEA;go_function=ubiquinol-cytochrome-c reductase activity|0008121||IEA,electron transfer activity|0009055||IEA;go_process=aerobic respiration|0009060||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491868.1;locus_tag=NIV78_RS01815;product=ubiquinol-cytochrome c reductase iron-sulfur subunit;protein_id=WP_012734441.1;transl_table=11 NZ_CP100136.1 RefSeq gene 364965 366347 . + . ID=gene-NIV78_RS01820;Name=NIV78_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01820 NZ_CP100136.1 Protein Homology CDS 364965 366347 . + 0 ID=cds-WP_012734442.1;Parent=gene-NIV78_RS01820;Dbxref=Genbank:WP_012734442.1;Name=WP_012734442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199894.1;locus_tag=NIV78_RS01820;product=cytochrome bc complex cytochrome b subunit;protein_id=WP_012734442.1;transl_table=11 NZ_CP100136.1 RefSeq gene 366370 367128 . + . ID=gene-NIV78_RS01825;Name=NIV78_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01825 NZ_CP100136.1 Protein Homology CDS 366370 367128 . + 0 ID=cds-WP_043225427.1;Parent=gene-NIV78_RS01825;Dbxref=Genbank:WP_043225427.1;Name=WP_043225427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199892.1;locus_tag=NIV78_RS01825;product=cytochrome c1;protein_id=WP_043225427.1;transl_table=11 NZ_CP100136.1 RefSeq gene 367225 367836 . + . ID=gene-NIV78_RS01830;Name=NIV78_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01830 NZ_CP100136.1 Protein Homology CDS 367225 367836 . + 0 ID=cds-WP_012734444.1;Parent=gene-NIV78_RS01830;Dbxref=Genbank:WP_012734444.1;Name=WP_012734444.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006999756.1;locus_tag=NIV78_RS01830;product=glutathione S-transferase N-terminal domain-containing protein;protein_id=WP_012734444.1;transl_table=11 NZ_CP100136.1 RefSeq gene 367900 368418 . + . ID=gene-NIV78_RS01835;Name=NIV78_RS01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01835 NZ_CP100136.1 Protein Homology CDS 367900 368418 . + 0 ID=cds-WP_017922935.1;Parent=gene-NIV78_RS01835;Dbxref=Genbank:WP_017922935.1;Name=WP_017922935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412425.1;locus_tag=NIV78_RS01835;product=ClpXP protease specificity-enhancing factor;protein_id=WP_017922935.1;transl_table=11 NZ_CP100136.1 RefSeq gene 368437 368512 . + . ID=gene-NIV78_RS01840;Name=NIV78_RS01840;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS01840 NZ_CP100136.1 tRNAscan-SE tRNA 368437 368512 . + . ID=rna-NIV78_RS01840;Parent=gene-NIV78_RS01840;anticodon=(pos:368470..368472);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS01840;product=tRNA-Thr NZ_CP100136.1 tRNAscan-SE exon 368437 368512 . + . ID=exon-NIV78_RS01840-1;Parent=rna-NIV78_RS01840;anticodon=(pos:368470..368472);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS01840;product=tRNA-Thr NZ_CP100136.1 RefSeq gene 368709 369911 . + . ID=gene-NIV78_RS01845;Name=NIV78_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01845 NZ_CP100136.1 Protein Homology CDS 368709 369911 . + 0 ID=cds-WP_017922934.1;Parent=gene-NIV78_RS01845;Dbxref=Genbank:WP_017922934.1;Name=WP_017922934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492455.1;locus_tag=NIV78_RS01845;product=integrase arm-type DNA-binding domain-containing protein;protein_id=WP_017922934.1;transl_table=11 NZ_CP100136.1 RefSeq gene 369919 370587 . + . ID=gene-NIV78_RS01850;Name=NIV78_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01850 NZ_CP100136.1 GeneMarkS-2+ CDS 369919 370587 . + 0 ID=cds-WP_257757131.1;Parent=gene-NIV78_RS01850;Dbxref=Genbank:WP_257757131.1;Name=WP_257757131.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS01850;product=hypothetical protein;protein_id=WP_257757131.1;transl_table=11 NZ_CP100136.1 RefSeq gene 370746 371909 . - . ID=gene-NIV78_RS01855;Name=NIV78_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01855 NZ_CP100136.1 Protein Homology CDS 370746 371909 . - 0 ID=cds-WP_157384111.1;Parent=gene-NIV78_RS01855;Dbxref=Genbank:WP_157384111.1;Name=WP_157384111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011871334.1;locus_tag=NIV78_RS01855;product=inovirus-type Gp2 protein;protein_id=WP_157384111.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 372289 372942 . - . ID=gene-NIV78_RS01860;Name=NIV78_RS01860;end_range=372942,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS01860;partial=true;pseudo=true NZ_CP100136.1 Protein Homology CDS 372289 372942 . - 0 ID=cds-NIV78_RS01860;Parent=gene-NIV78_RS01860;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=372942,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024547.2;locus_tag=NIV78_RS01860;partial=true;product=YfjI family protein;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 373112 374158 . + . ID=gene-NIV78_RS01865;Name=NIV78_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01865 NZ_CP100136.1 Protein Homology CDS 373112 374158 . + 0 ID=cds-WP_257757132.1;Parent=gene-NIV78_RS01865;Dbxref=Genbank:WP_257757132.1;Name=WP_257757132.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734099.1;locus_tag=NIV78_RS01865;product=IS481 family transposase;protein_id=WP_257757132.1;transl_table=11 NZ_CP100136.1 RefSeq gene 374207 375106 . - . ID=gene-NIV78_RS01870;Name=NIV78_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01870 NZ_CP100136.1 Protein Homology CDS 374207 375106 . - 0 ID=cds-WP_257757133.1;Parent=gene-NIV78_RS01870;Dbxref=Genbank:WP_257757133.1;Name=WP_257757133.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024547.2;locus_tag=NIV78_RS01870;product=YfjI family protein;protein_id=WP_257757133.1;transl_table=11 NZ_CP100136.1 RefSeq gene 375178 375492 . - . ID=gene-NIV78_RS01875;Name=NIV78_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01875 NZ_CP100136.1 GeneMarkS-2+ CDS 375178 375492 . - 0 ID=cds-WP_257757134.1;Parent=gene-NIV78_RS01875;Dbxref=Genbank:WP_257757134.1;Name=WP_257757134.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS01875;product=hypothetical protein;protein_id=WP_257757134.1;transl_table=11 NZ_CP100136.1 RefSeq gene 376563 377609 . - . ID=gene-NIV78_RS01880;Name=NIV78_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01880 NZ_CP100136.1 Protein Homology CDS 376563 377609 . - 0 ID=cds-WP_257757132.1-2;Parent=gene-NIV78_RS01880;Dbxref=Genbank:WP_257757132.1;Name=WP_257757132.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734099.1;locus_tag=NIV78_RS01880;product=IS481 family transposase;protein_id=WP_257757132.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 377895 378173 . - . ID=gene-NIV78_RS01885;Name=NIV78_RS01885;end_range=378173,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS01885;partial=true;pseudo=true NZ_CP100136.1 Protein Homology CDS 377895 378173 . - 0 ID=cds-NIV78_RS01885;Parent=gene-NIV78_RS01885;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=378173,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013700154.1;locus_tag=NIV78_RS01885;partial=true;product=ATP-binding protein;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 378241 379107 . - . ID=gene-NIV78_RS01890;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=NIV78_RS01890 NZ_CP100136.1 Protein Homology CDS 378241 379107 . - 0 ID=cds-WP_012732871.1;Parent=gene-NIV78_RS01890;Dbxref=Genbank:WP_012732871.1;Name=WP_012732871.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476481.1;locus_tag=NIV78_RS01890;product=IS21-like element ISBcen28 family helper ATPase IstB;protein_id=WP_012732871.1;transl_table=11 NZ_CP100136.1 RefSeq gene 379104 380360 . - . ID=gene-NIV78_RS01895;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=NIV78_RS01895 NZ_CP100136.1 Protein Homology CDS 379104 380360 . - 0 ID=cds-WP_012734039.1;Parent=gene-NIV78_RS01895;Dbxref=Genbank:WP_012734039.1;Name=WP_012734039.1;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476480.1;locus_tag=NIV78_RS01895;product=IS21 family transposase;protein_id=WP_012734039.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 380489 381010 . - . ID=gene-NIV78_RS01900;Name=NIV78_RS01900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS01900;partial=true;pseudo=true;start_range=.,380489 NZ_CP100136.1 Protein Homology CDS 380489 381010 . - 0 ID=cds-NIV78_RS01900;Parent=gene-NIV78_RS01900;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016495557.1;locus_tag=NIV78_RS01900;partial=true;product=ATP-binding protein;pseudo=true;start_range=.,380489;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 381003 381557 . - . ID=gene-NIV78_RS01905;Name=NIV78_RS01905;end_range=381557,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS01905;partial=true;pseudo=true NZ_CP100136.1 Protein Homology CDS 381003 381557 . - 0 ID=cds-NIV78_RS01905;Parent=gene-NIV78_RS01905;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=381557,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612028.1;locus_tag=NIV78_RS01905;partial=true;product=IS21 family transposase;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 381576 383132 . - . ID=gene-NIV78_RS01910;Name=NIV78_RS01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01910 NZ_CP100136.1 Protein Homology CDS 381576 383132 . - 0 ID=cds-WP_012732752.1;Parent=gene-NIV78_RS01910;Dbxref=Genbank:WP_012732752.1;Name=WP_012732752.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875269.1;locus_tag=NIV78_RS01910;product=IS66 family transposase;protein_id=WP_012732752.1;transl_table=11 NZ_CP100136.1 RefSeq gene 383164 383514 . - . ID=gene-NIV78_RS01915;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=NIV78_RS01915 NZ_CP100136.1 Protein Homology CDS 383164 383514 . - 0 ID=cds-WP_012732753.1;Parent=gene-NIV78_RS01915;Dbxref=Genbank:WP_012732753.1;Name=WP_012732753.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: protein motif:HMM:NF017528.2;locus_tag=NIV78_RS01915;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_012732753.1;transl_table=11 NZ_CP100136.1 RefSeq gene 383490 383966 . - . ID=gene-NIV78_RS01920;Name=NIV78_RS01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01920 NZ_CP100136.1 Protein Homology CDS 383490 383966 . - 0 ID=cds-WP_012734051.1;Parent=gene-NIV78_RS01920;Dbxref=Genbank:WP_012734051.1;Name=WP_012734051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699891.1;locus_tag=NIV78_RS01920;product=transposase;protein_id=WP_012734051.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 384055 385020 . - . ID=gene-NIV78_RS01925;Name=istA;gbkey=Gene;gene=istA;gene_biotype=pseudogene;locus_tag=NIV78_RS01925;partial=true;pseudo=true;start_range=.,384055 NZ_CP100136.1 Protein Homology CDS 384055 385020 . - 0 ID=cds-NIV78_RS01925;Parent=gene-NIV78_RS01925;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003097546.1;locus_tag=NIV78_RS01925;partial=true;product=IS21 family transposase;pseudo=true;start_range=.,384055;transl_table=11 NZ_CP100136.1 RefSeq gene 385219 386036 . + . ID=gene-NIV78_RS01930;Name=NIV78_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01930 NZ_CP100136.1 Protein Homology CDS 385219 385567 . + 0 ID=cds-WP_085962362.1;Parent=gene-NIV78_RS01930;Dbxref=Genbank:WP_085962362.1;Name=WP_085962362.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS01930;product=IS5 family transposase;protein_id=WP_085962362.1;transl_table=11 NZ_CP100136.1 Protein Homology CDS 385567 386036 . + 2 ID=cds-WP_085962362.1;Parent=gene-NIV78_RS01930;Dbxref=Genbank:WP_085962362.1;Name=WP_085962362.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS01930;product=IS5 family transposase;protein_id=WP_085962362.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 386048 386488 . - . ID=gene-NIV78_RS01935;Name=NIV78_RS01935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS01935;partial=true;pseudo=true;start_range=.,386048 NZ_CP100136.1 Protein Homology CDS 386048 386488 . - 0 ID=cds-NIV78_RS01935;Parent=gene-NIV78_RS01935;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011401676.1;locus_tag=NIV78_RS01935;partial=true;product=PAAR domain-containing protein;pseudo=true;start_range=.,386048;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 387441 387799 . + . ID=gene-NIV78_RS01940;Name=NIV78_RS01940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS01940;pseudo=true NZ_CP100136.1 Protein Homology CDS 387441 387799 . + 0 ID=cds-NIV78_RS01940;Parent=gene-NIV78_RS01940;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023288.2;locus_tag=NIV78_RS01940;product=N-acetylmuramidase family protein;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 387796 388428 . + . ID=gene-NIV78_RS01945;Name=NIV78_RS01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01945 NZ_CP100136.1 GeneMarkS-2+ CDS 387796 388428 . + 0 ID=cds-WP_251107231.1;Parent=gene-NIV78_RS01945;Dbxref=Genbank:WP_251107231.1;Name=WP_251107231.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS01945;product=hypothetical protein;protein_id=WP_251107231.1;transl_table=11 NZ_CP100136.1 RefSeq gene 389226 390413 . + . ID=gene-NIV78_RS01950;Name=NIV78_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01950 NZ_CP100136.1 Protein Homology CDS 389226 390413 . + 0 ID=cds-WP_012734474.1;Parent=gene-NIV78_RS01950;Dbxref=Genbank:WP_012734474.1;Name=WP_012734474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734474.1;locus_tag=NIV78_RS01950;product=GGDEF domain-containing protein;protein_id=WP_012734474.1;transl_table=11 NZ_CP100136.1 RefSeq gene 390592 391383 . - . ID=gene-NIV78_RS01955;Name=icmH;gbkey=Gene;gene=icmH;gene_biotype=protein_coding;locus_tag=NIV78_RS01955 NZ_CP100136.1 Protein Homology CDS 390592 391383 . - 0 ID=cds-WP_012734475.1;Parent=gene-NIV78_RS01955;Dbxref=Genbank:WP_012734475.1;Name=WP_012734475.1;gbkey=CDS;gene=icmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106837.1;locus_tag=NIV78_RS01955;product=type IVB secretion system protein IcmH/DotU;protein_id=WP_012734475.1;transl_table=11 NZ_CP100136.1 RefSeq gene 391380 392726 . - . ID=gene-NIV78_RS01960;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=NIV78_RS01960 NZ_CP100136.1 Protein Homology CDS 391380 392726 . - 0 ID=cds-WP_012734476.1;Parent=gene-NIV78_RS01960;Dbxref=Genbank:WP_012734476.1;Name=WP_012734476.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssK;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409507.1;locus_tag=NIV78_RS01960;product=type VI secretion system baseplate subunit TssK;protein_id=WP_012734476.1;transl_table=11 NZ_CP100136.1 RefSeq gene 392828 393445 . - . ID=gene-NIV78_RS01965;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=NIV78_RS01965 NZ_CP100136.1 Protein Homology CDS 392828 393445 . - 0 ID=cds-WP_012734477.1;Parent=gene-NIV78_RS01965;Dbxref=Genbank:WP_012734477.1;Name=WP_012734477.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssJ;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734477.1;locus_tag=NIV78_RS01965;product=type VI secretion system lipoprotein TssJ;protein_id=WP_012734477.1;transl_table=11 NZ_CP100136.1 RefSeq gene 393815 394459 . + . ID=gene-NIV78_RS01970;Name=NIV78_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01970 NZ_CP100136.1 Protein Homology CDS 393815 394459 . + 0 ID=cds-WP_017922810.1;Parent=gene-NIV78_RS01970;Dbxref=Genbank:WP_017922810.1;Name=WP_017922810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004531875.1;locus_tag=NIV78_RS01970;product=tetratricopeptide repeat protein;protein_id=WP_017922810.1;transl_table=11 NZ_CP100136.1 RefSeq gene 394503 395042 . + . ID=gene-NIV78_RS01975;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=NIV78_RS01975 NZ_CP100136.1 Protein Homology CDS 394503 395042 . + 0 ID=cds-WP_012734479.1;Parent=gene-NIV78_RS01975;Dbxref=Genbank:WP_012734479.1;Name=WP_012734479.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssB;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734479.1;locus_tag=NIV78_RS01975;product=type VI secretion system contractile sheath small subunit;protein_id=WP_012734479.1;transl_table=11 NZ_CP100136.1 RefSeq gene 395057 396547 . + . ID=gene-NIV78_RS01980;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=NIV78_RS01980 NZ_CP100136.1 Protein Homology CDS 395057 396547 . + 0 ID=cds-WP_012734480.1;Parent=gene-NIV78_RS01980;Dbxref=Genbank:WP_012734480.1;Name=WP_012734480.1;Ontology_term=GO:0033103,GO:0003674,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012426790.1;locus_tag=NIV78_RS01980;product=type VI secretion system contractile sheath large subunit;protein_id=WP_012734480.1;transl_table=11 NZ_CP100136.1 RefSeq gene 396625 397128 . + . ID=gene-NIV78_RS01985;Name=NIV78_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS01985 NZ_CP100136.1 Protein Homology CDS 396625 397128 . + 0 ID=cds-WP_012734481.1;Parent=gene-NIV78_RS01985;Dbxref=Genbank:WP_012734481.1;Name=WP_012734481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883106.1;locus_tag=NIV78_RS01985;product=type VI secretion system tube protein Hcp;protein_id=WP_012734481.1;transl_table=11 NZ_CP100136.1 RefSeq gene 397206 397688 . + . ID=gene-NIV78_RS01990;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=NIV78_RS01990 NZ_CP100136.1 Protein Homology CDS 397206 397688 . + 0 ID=cds-WP_012734482.1;Parent=gene-NIV78_RS01990;Dbxref=Genbank:WP_012734482.1;Name=WP_012734482.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssE;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734482.1;locus_tag=NIV78_RS01990;product=type VI secretion system baseplate subunit TssE;protein_id=WP_012734482.1;transl_table=11 NZ_CP100136.1 RefSeq gene 397781 399619 . + . ID=gene-NIV78_RS01995;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=NIV78_RS01995 NZ_CP100136.1 Protein Homology CDS 397781 399619 . + 0 ID=cds-WP_012734483.1;Parent=gene-NIV78_RS01995;Dbxref=Genbank:WP_012734483.1;Name=WP_012734483.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssF;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484396.1;locus_tag=NIV78_RS01995;product=type VI secretion system baseplate subunit TssF;protein_id=WP_012734483.1;transl_table=11 NZ_CP100136.1 RefSeq gene 399583 400680 . + . ID=gene-NIV78_RS02000;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=NIV78_RS02000 NZ_CP100136.1 Protein Homology CDS 399583 400680 . + 0 ID=cds-WP_017424101.1;Parent=gene-NIV78_RS02000;Dbxref=Genbank:WP_017424101.1;Name=WP_017424101.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009971111.1;locus_tag=NIV78_RS02000;product=type VI secretion system baseplate subunit TssG;protein_id=WP_017424101.1;transl_table=11 NZ_CP100136.1 RefSeq gene 400746 403415 . + . ID=gene-NIV78_RS02005;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;locus_tag=NIV78_RS02005 NZ_CP100136.1 Protein Homology CDS 400746 403415 . + 0 ID=cds-WP_124837388.1;Parent=gene-NIV78_RS02005;Dbxref=Genbank:WP_124837388.1;Name=WP_124837388.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009967199.1;locus_tag=NIV78_RS02005;product=type VI secretion system ATPase TssH;protein_id=WP_124837388.1;transl_table=11 NZ_CP100136.1 RefSeq gene 403506 404648 . + . ID=gene-NIV78_RS02010;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=NIV78_RS02010 NZ_CP100136.1 Protein Homology CDS 403506 404648 . + 0 ID=cds-WP_257757136.1;Parent=gene-NIV78_RS02010;Dbxref=Genbank:WP_257757136.1;Name=WP_257757136.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009967198.1;locus_tag=NIV78_RS02010;product=type VI secretion system protein TssA;protein_id=WP_257757136.1;transl_table=11 NZ_CP100136.1 RefSeq gene 404742 405806 . - . ID=gene-NIV78_RS02015;Name=NIV78_RS02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02015 NZ_CP100136.1 Protein Homology CDS 404742 405806 . - 0 ID=cds-WP_124837389.1;Parent=gene-NIV78_RS02015;Dbxref=Genbank:WP_124837389.1;Name=WP_124837389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734487.1;locus_tag=NIV78_RS02015;product=OmpA family protein;protein_id=WP_124837389.1;transl_table=11 NZ_CP100136.1 RefSeq gene 405811 406803 . - . ID=gene-NIV78_RS02020;Name=tagF;gbkey=Gene;gene=tagF;gene_biotype=protein_coding;locus_tag=NIV78_RS02020 NZ_CP100136.1 Protein Homology CDS 405811 406803 . - 0 ID=cds-WP_012734488.1;Parent=gene-NIV78_RS02020;Dbxref=Genbank:WP_012734488.1;Name=WP_012734488.1;gbkey=CDS;gene=tagF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006029394.1;locus_tag=NIV78_RS02020;product=type VI secretion system-associated protein TagF;protein_id=WP_012734488.1;transl_table=11 NZ_CP100136.1 RefSeq gene 406800 410672 . - . ID=gene-NIV78_RS02025;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=NIV78_RS02025 NZ_CP100136.1 Protein Homology CDS 406800 410672 . - 0 ID=cds-WP_257757139.1;Parent=gene-NIV78_RS02025;Dbxref=Genbank:WP_257757139.1;Name=WP_257757139.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssM;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527833.1;locus_tag=NIV78_RS02025;product=type VI secretion system membrane subunit TssM;protein_id=WP_257757139.1;transl_table=11 NZ_CP100136.1 RefSeq gene 410938 411789 . - . ID=gene-NIV78_RS02030;Name=NIV78_RS02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02030 NZ_CP100136.1 Protein Homology CDS 410938 411789 . - 0 ID=cds-WP_012734490.1;Parent=gene-NIV78_RS02030;Dbxref=Genbank:WP_012734490.1;Name=WP_012734490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696474.1;locus_tag=NIV78_RS02030;product=M15 family metallopeptidase;protein_id=WP_012734490.1;transl_table=11 NZ_CP100136.1 RefSeq gene 411913 412872 . + . ID=gene-NIV78_RS02035;Name=NIV78_RS02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02035 NZ_CP100136.1 Protein Homology CDS 411913 412872 . + 0 ID=cds-WP_012734491.1;Parent=gene-NIV78_RS02035;Dbxref=Genbank:WP_012734491.1;Name=WP_012734491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004542717.1;locus_tag=NIV78_RS02035;product=hypothetical protein;protein_id=WP_012734491.1;transl_table=11 NZ_CP100136.1 RefSeq gene 413269 414303 . + . ID=gene-NIV78_RS02040;Name=NIV78_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02040 NZ_CP100136.1 Protein Homology CDS 413269 414303 . + 0 ID=cds-WP_174524973.1;Parent=gene-NIV78_RS02040;Dbxref=Genbank:WP_174524973.1;Name=WP_174524973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009968483.1;locus_tag=NIV78_RS02040;product=transporter;protein_id=WP_174524973.1;transl_table=11 NZ_CP100136.1 RefSeq gene 414391 414543 . - . ID=gene-NIV78_RS02045;Name=NIV78_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02045 NZ_CP100136.1 Protein Homology CDS 414391 414543 . - 0 ID=cds-WP_012734493.1;Parent=gene-NIV78_RS02045;Dbxref=Genbank:WP_012734493.1;Name=WP_012734493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734493.1;locus_tag=NIV78_RS02045;product=DUF1427 family protein;protein_id=WP_012734493.1;transl_table=11 NZ_CP100136.1 RefSeq gene 414585 415562 . - . ID=gene-NIV78_RS02050;Name=NIV78_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02050 NZ_CP100136.1 Protein Homology CDS 414585 415562 . - 0 ID=cds-WP_017924486.1;Parent=gene-NIV78_RS02050;Dbxref=Genbank:WP_017924486.1;Name=WP_017924486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350777.1;locus_tag=NIV78_RS02050;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_017924486.1;transl_table=11 NZ_CP100136.1 RefSeq gene 415728 416651 . + . ID=gene-NIV78_RS02055;Name=NIV78_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02055 NZ_CP100136.1 Protein Homology CDS 415728 416651 . + 0 ID=cds-WP_124837391.1;Parent=gene-NIV78_RS02055;Dbxref=Genbank:WP_124837391.1;Name=WP_124837391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734495.1;locus_tag=NIV78_RS02055;product=LysR family transcriptional regulator;protein_id=WP_124837391.1;transl_table=11 NZ_CP100136.1 RefSeq gene 416850 417335 . + . ID=gene-NIV78_RS02060;Name=NIV78_RS02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02060 NZ_CP100136.1 Protein Homology CDS 416850 417335 . + 0 ID=cds-WP_017924404.1;Parent=gene-NIV78_RS02060;Dbxref=Genbank:WP_017924404.1;Name=WP_017924404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734496.1;locus_tag=NIV78_RS02060;product=LEA type 2 family protein;protein_id=WP_017924404.1;transl_table=11 NZ_CP100136.1 RefSeq gene 417506 418639 . + . ID=gene-NIV78_RS02065;Name=NIV78_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02065 NZ_CP100136.1 Protein Homology CDS 417506 418639 . + 0 ID=cds-WP_251107232.1;Parent=gene-NIV78_RS02065;Dbxref=Genbank:WP_251107232.1;Name=WP_251107232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010117200.1;locus_tag=NIV78_RS02065;product=methyltransferase;protein_id=WP_251107232.1;transl_table=11 NZ_CP100136.1 RefSeq gene 418850 419713 . + . ID=gene-NIV78_RS02070;Name=NIV78_RS02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02070 NZ_CP100136.1 Protein Homology CDS 418850 419713 . + 0 ID=cds-WP_257757142.1;Parent=gene-NIV78_RS02070;Dbxref=Genbank:WP_257757142.1;Name=WP_257757142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734498.1;locus_tag=NIV78_RS02070;product=SAM-dependent methyltransferase;protein_id=WP_257757142.1;transl_table=11 NZ_CP100136.1 RefSeq gene 419757 420338 . - . ID=gene-NIV78_RS02075;Name=NIV78_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02075 NZ_CP100136.1 Protein Homology CDS 419757 420338 . - 0 ID=cds-WP_012734499.1;Parent=gene-NIV78_RS02075;Dbxref=Genbank:WP_012734499.1;Name=WP_012734499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734499.1;locus_tag=NIV78_RS02075;product=DUF1415 domain-containing protein;protein_id=WP_012734499.1;transl_table=11 NZ_CP100136.1 RefSeq gene 420432 421046 . - . ID=gene-NIV78_RS02080;Name=NIV78_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02080 NZ_CP100136.1 Protein Homology CDS 420432 421046 . - 0 ID=cds-WP_017923953.1;Parent=gene-NIV78_RS02080;Dbxref=Genbank:WP_017923953.1;Name=WP_017923953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424172.1;locus_tag=NIV78_RS02080;product=TetR/AcrR family transcriptional regulator;protein_id=WP_017923953.1;transl_table=11 NZ_CP100136.1 RefSeq gene 421211 422497 . + . ID=gene-NIV78_RS02085;Name=NIV78_RS02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02085 NZ_CP100136.1 Protein Homology CDS 421211 422497 . + 0 ID=cds-WP_012734501.1;Parent=gene-NIV78_RS02085;Dbxref=Genbank:WP_012734501.1;Name=WP_012734501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734501.1;locus_tag=NIV78_RS02085;product=MFS transporter;protein_id=WP_012734501.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 422650 423251 . + . ID=gene-NIV78_RS02090;Name=NIV78_RS02090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS02090;pseudo=true NZ_CP100136.1 Protein Homology CDS 422650 423251 . + 0 ID=cds-NIV78_RS02090;Parent=gene-NIV78_RS02090;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734502.1;locus_tag=NIV78_RS02090;product=nitroreductase family protein;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 423406 424665 . + . ID=gene-NIV78_RS02095;Name=NIV78_RS02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02095 NZ_CP100136.1 Protein Homology CDS 423406 424665 . + 0 ID=cds-WP_257757143.1;Parent=gene-NIV78_RS02095;Dbxref=Genbank:WP_257757143.1;Name=WP_257757143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414128.1;locus_tag=NIV78_RS02095;product=Hsp70 family protein;protein_id=WP_257757143.1;transl_table=11 NZ_CP100136.1 RefSeq gene 424907 425110 . - . ID=gene-NIV78_RS02100;Name=NIV78_RS02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02100 NZ_CP100136.1 Protein Homology CDS 424907 425110 . - 0 ID=cds-WP_012734504.1;Parent=gene-NIV78_RS02100;Dbxref=Genbank:WP_012734504.1;Name=WP_012734504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003230776.1;locus_tag=NIV78_RS02100;product=cold-shock protein;protein_id=WP_012734504.1;transl_table=11 NZ_CP100136.1 RefSeq gene 425545 427143 . + . ID=gene-NIV78_RS02105;Name=NIV78_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02105 NZ_CP100136.1 Protein Homology CDS 425545 427143 . + 0 ID=cds-WP_012734505.1;Parent=gene-NIV78_RS02105;Dbxref=Genbank:WP_012734505.1;Name=WP_012734505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186824.1;locus_tag=NIV78_RS02105;product=APC family permease;protein_id=WP_012734505.1;transl_table=11 NZ_CP100136.1 RefSeq gene 427245 428036 . - . ID=gene-NIV78_RS02110;Name=NIV78_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02110 NZ_CP100136.1 Protein Homology CDS 427245 428036 . - 0 ID=cds-WP_161521228.1;Parent=gene-NIV78_RS02110;Dbxref=Genbank:WP_161521228.1;Name=WP_161521228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734506.1;locus_tag=NIV78_RS02110;product=dioxygenase;protein_id=WP_161521228.1;transl_table=11 NZ_CP100136.1 RefSeq gene 428214 428810 . - . ID=gene-NIV78_RS02115;Name=NIV78_RS02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02115 NZ_CP100136.1 Protein Homology CDS 428214 428810 . - 0 ID=cds-WP_012734507.1;Parent=gene-NIV78_RS02115;Dbxref=Genbank:WP_012734507.1;Name=WP_012734507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601632.1;locus_tag=NIV78_RS02115;product=UbiX family flavin prenyltransferase;protein_id=WP_012734507.1;transl_table=11 NZ_CP100136.1 RefSeq gene 428818 429129 . - . ID=gene-NIV78_RS02120;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=NIV78_RS02120 NZ_CP100136.1 Protein Homology CDS 428818 429129 . - 0 ID=cds-WP_012734508.1;Parent=gene-NIV78_RS02120;Dbxref=Genbank:WP_012734508.1;Name=WP_012734508.1;Ontology_term=GO:0009055;gbkey=CDS;gene=grxD;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018420101.1;locus_tag=NIV78_RS02120;product=Grx4 family monothiol glutaredoxin;protein_id=WP_012734508.1;transl_table=11 NZ_CP100136.1 RefSeq gene 429284 430132 . - . ID=gene-NIV78_RS02125;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=NIV78_RS02125 NZ_CP100136.1 Protein Homology CDS 429284 430132 . - 0 ID=cds-WP_124837395.1;Parent=gene-NIV78_RS02125;Dbxref=Genbank:WP_124837395.1;Name=WP_124837395.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696491.1;locus_tag=NIV78_RS02125;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_124837395.1;transl_table=11 NZ_CP100136.1 RefSeq gene 430153 431235 . - . ID=gene-NIV78_RS02130;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=NIV78_RS02130 NZ_CP100136.1 Protein Homology CDS 430153 431235 . - 0 ID=cds-WP_012734510.1;Parent=gene-NIV78_RS02130;Dbxref=Genbank:WP_012734510.1;Name=WP_012734510.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883134.1;locus_tag=NIV78_RS02130;product=peptide chain release factor 1;protein_id=WP_012734510.1;transl_table=11 NZ_CP100136.1 RefSeq gene 431316 432602 . - . ID=gene-NIV78_RS02135;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=NIV78_RS02135 NZ_CP100136.1 Protein Homology CDS 431316 432602 . - 0 ID=cds-WP_012734511.1;Parent=gene-NIV78_RS02135;Dbxref=Genbank:WP_012734511.1;Name=WP_012734511.1;Ontology_term=GO:0006779,GO:0008883,GO:0005737;gbkey=CDS;gene=hemA;go_component=cytoplasm|0005737||IEA;go_function=glutamyl-tRNA reductase activity|0008883||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734511.1;locus_tag=NIV78_RS02135;product=glutamyl-tRNA reductase;protein_id=WP_012734511.1;transl_table=11 NZ_CP100136.1 RefSeq gene 433213 433464 . + . ID=gene-NIV78_RS02140;Name=NIV78_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02140 NZ_CP100136.1 Protein Homology CDS 433213 433464 . + 0 ID=cds-WP_012734512.1;Parent=gene-NIV78_RS02140;Dbxref=Genbank:WP_012734512.1;Name=WP_012734512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696494.1;locus_tag=NIV78_RS02140;product=hypothetical protein;protein_id=WP_012734512.1;transl_table=11 NZ_CP100136.1 RefSeq gene 433487 435301 . + . ID=gene-NIV78_RS02145;Name=NIV78_RS02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02145 NZ_CP100136.1 Protein Homology CDS 433487 435301 . + 0 ID=cds-WP_035983132.1;Parent=gene-NIV78_RS02145;Dbxref=Genbank:WP_035983132.1;Name=WP_035983132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106698.1;locus_tag=NIV78_RS02145;product=aminopeptidase P family protein;protein_id=WP_035983132.1;transl_table=11 NZ_CP100136.1 RefSeq gene 435331 435957 . + . ID=gene-NIV78_RS02150;Name=NIV78_RS02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02150 NZ_CP100136.1 Protein Homology CDS 435331 435957 . + 0 ID=cds-WP_012734514.1;Parent=gene-NIV78_RS02150;Dbxref=Genbank:WP_012734514.1;Name=WP_012734514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734514.1;locus_tag=NIV78_RS02150;product=HAD family phosphatase;protein_id=WP_012734514.1;transl_table=11 NZ_CP100136.1 RefSeq gene 436042 437709 . - . ID=gene-NIV78_RS02155;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=NIV78_RS02155 NZ_CP100136.1 Protein Homology CDS 436042 437709 . - 0 ID=cds-WP_012734515.1;Parent=gene-NIV78_RS02155;Dbxref=Genbank:WP_012734515.1;Name=WP_012734515.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186903.1;locus_tag=NIV78_RS02155;product=energy-dependent translational throttle protein EttA;protein_id=WP_012734515.1;transl_table=11 NZ_CP100136.1 RefSeq gene 438263 439357 . - . ID=gene-NIV78_RS02160;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=NIV78_RS02160 NZ_CP100136.1 Protein Homology CDS 438263 439357 . - 0 ID=cds-WP_012734516.1;Parent=gene-NIV78_RS02160;Dbxref=Genbank:WP_012734516.1;Name=WP_012734516.1;Ontology_term=GO:0005525;gbkey=CDS;gene=ychF;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477050.1;locus_tag=NIV78_RS02160;product=redox-regulated ATPase YchF;protein_id=WP_012734516.1;transl_table=11 NZ_CP100136.1 RefSeq gene 439592 439957 . - . ID=gene-NIV78_RS02165;Name=NIV78_RS02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02165 NZ_CP100136.1 Protein Homology CDS 439592 439957 . - 0 ID=cds-WP_012734517.1;Parent=gene-NIV78_RS02165;Dbxref=Genbank:WP_012734517.1;Name=WP_012734517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186799.1;locus_tag=NIV78_RS02165;product=hypothetical protein;protein_id=WP_012734517.1;transl_table=11 NZ_CP100136.1 RefSeq gene 440088 440210 . - . ID=gene-NIV78_RS02170;Name=NIV78_RS02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02170 NZ_CP100136.1 Protein Homology CDS 440088 440210 . - 0 ID=cds-WP_012734518.1;Parent=gene-NIV78_RS02170;Dbxref=Genbank:WP_012734518.1;Name=WP_012734518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004534990.1;locus_tag=NIV78_RS02170;product=hypothetical protein;protein_id=WP_012734518.1;transl_table=11 NZ_CP100136.1 RefSeq gene 440632 441813 . + . ID=gene-NIV78_RS02175;Name=NIV78_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02175 NZ_CP100136.1 Protein Homology CDS 440632 441813 . + 0 ID=cds-WP_043226231.1;Parent=gene-NIV78_RS02175;Dbxref=Genbank:WP_043226231.1;Name=WP_043226231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214205.1;locus_tag=NIV78_RS02175;product=UbiH/UbiF family hydroxylase;protein_id=WP_043226231.1;transl_table=11 NZ_CP100136.1 RefSeq gene 442039 442764 . + . ID=gene-NIV78_RS02180;Name=NIV78_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02180 NZ_CP100136.1 Protein Homology CDS 442039 442764 . + 0 ID=cds-WP_012734520.1;Parent=gene-NIV78_RS02180;Dbxref=Genbank:WP_012734520.1;Name=WP_012734520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186871.1;locus_tag=NIV78_RS02180;product=DsbC family protein;protein_id=WP_012734520.1;transl_table=11 NZ_CP100136.1 RefSeq gene 442880 444670 . + . ID=gene-NIV78_RS02185;Name=NIV78_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02185 NZ_CP100136.1 Protein Homology CDS 442880 444670 . + 0 ID=cds-WP_012734521.1;Parent=gene-NIV78_RS02185;Dbxref=Genbank:WP_012734521.1;Name=WP_012734521.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734521.1;locus_tag=NIV78_RS02185;product=PDZ domain-containing protein;protein_id=WP_012734521.1;transl_table=11 NZ_CP100136.1 RefSeq gene 444816 445412 . + . ID=gene-NIV78_RS02190;Name=NIV78_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02190 NZ_CP100136.1 Protein Homology CDS 444816 445412 . + 0 ID=cds-WP_012734522.1;Parent=gene-NIV78_RS02190;Dbxref=Genbank:WP_012734522.1;Name=WP_012734522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006029810.1;locus_tag=NIV78_RS02190;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_012734522.1;transl_table=11 NZ_CP100136.1 RefSeq gene 445573 446421 . - . ID=gene-NIV78_RS02195;Name=NIV78_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02195 NZ_CP100136.1 Protein Homology CDS 445573 446421 . - 0 ID=cds-WP_251107233.1;Parent=gene-NIV78_RS02195;Dbxref=Genbank:WP_251107233.1;Name=WP_251107233.1;Ontology_term=GO:0006281,GO:0006284,GO:0004844;gbkey=CDS;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406911.1;locus_tag=NIV78_RS02195;product=uracil-DNA glycosylase;protein_id=WP_251107233.1;transl_table=11 NZ_CP100136.1 RefSeq gene 446436 447062 . - . ID=gene-NIV78_RS02200;Name=NIV78_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02200 NZ_CP100136.1 Protein Homology CDS 446436 447062 . - 0 ID=cds-WP_012734524.1;Parent=gene-NIV78_RS02200;Dbxref=Genbank:WP_012734524.1;Name=WP_012734524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696523.1;locus_tag=NIV78_RS02200;product=CYTH domain-containing protein;protein_id=WP_012734524.1;transl_table=11 NZ_CP100136.1 RefSeq gene 447080 447871 . - . ID=gene-NIV78_RS02205;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=NIV78_RS02205 NZ_CP100136.1 Protein Homology CDS 447080 447871 . - 0 ID=cds-WP_012734525.1;Parent=gene-NIV78_RS02205;Dbxref=Genbank:WP_012734525.1;Name=WP_012734525.1;Ontology_term=GO:0006568,GO:0004425;gbkey=CDS;gene=trpC;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA;go_process=tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106662.1;locus_tag=NIV78_RS02205;product=indole-3-glycerol phosphate synthase TrpC;protein_id=WP_012734525.1;transl_table=11 NZ_CP100136.1 RefSeq gene 447942 448970 . - . ID=gene-NIV78_RS02210;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=NIV78_RS02210 NZ_CP100136.1 Protein Homology CDS 447942 448970 . - 0 ID=cds-WP_012734526.1;Parent=gene-NIV78_RS02210;Dbxref=Genbank:WP_012734526.1;Name=WP_012734526.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007580661.1;locus_tag=NIV78_RS02210;product=anthranilate phosphoribosyltransferase;protein_id=WP_012734526.1;transl_table=11 NZ_CP100136.1 RefSeq gene 448982 449572 . - . ID=gene-NIV78_RS02215;Name=NIV78_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02215 NZ_CP100136.1 Protein Homology CDS 448982 449572 . - 0 ID=cds-WP_017924144.1;Parent=gene-NIV78_RS02215;Dbxref=Genbank:WP_017924144.1;Name=WP_017924144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400469.1;locus_tag=NIV78_RS02215;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=WP_017924144.1;transl_table=11 NZ_CP100136.1 RefSeq gene 449948 451198 . - . ID=gene-NIV78_RS02220;Name=NIV78_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02220 NZ_CP100136.1 Protein Homology CDS 449948 451198 . - 0 ID=cds-WP_012734528.1;Parent=gene-NIV78_RS02220;Dbxref=Genbank:WP_012734528.1;Name=WP_012734528.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006391139.1;locus_tag=NIV78_RS02220;product=MFS transporter;protein_id=WP_012734528.1;transl_table=11 NZ_CP100136.1 RefSeq gene 451485 452978 . - . ID=gene-NIV78_RS02225;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=NIV78_RS02225 NZ_CP100136.1 Protein Homology CDS 451485 452978 . - 0 ID=cds-WP_012734529.1;Parent=gene-NIV78_RS02225;Dbxref=Genbank:WP_012734529.1;Name=WP_012734529.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020070700.1;locus_tag=NIV78_RS02225;product=anthranilate synthase component I;protein_id=WP_012734529.1;transl_table=11 NZ_CP100136.1 RefSeq gene 453329 454042 . - . ID=gene-NIV78_RS02230;Name=NIV78_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02230 NZ_CP100136.1 Protein Homology CDS 453329 454042 . - 0 ID=cds-WP_017923880.1;Parent=gene-NIV78_RS02230;Dbxref=Genbank:WP_017923880.1;Name=WP_017923880.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424578.1;locus_tag=NIV78_RS02230;product=phosphoglycolate phosphatase;protein_id=WP_017923880.1;transl_table=11 NZ_CP100136.1 RefSeq gene 454047 454733 . - . ID=gene-NIV78_RS02235;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=NIV78_RS02235 NZ_CP100136.1 Protein Homology CDS 454047 454733 . - 0 ID=cds-WP_017923881.1;Parent=gene-NIV78_RS02235;Dbxref=Genbank:WP_017923881.1;Name=WP_017923881.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696529.1;locus_tag=NIV78_RS02235;product=ribulose-phosphate 3-epimerase;protein_id=WP_017923881.1;transl_table=11 NZ_CP100136.1 RefSeq gene 454913 455287 . + . ID=gene-NIV78_RS02240;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=NIV78_RS02240 NZ_CP100136.1 Protein Homology CDS 454913 455287 . + 0 ID=cds-WP_012734532.1;Parent=gene-NIV78_RS02240;Dbxref=Genbank:WP_012734532.1;Name=WP_012734532.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186878.1;locus_tag=NIV78_RS02240;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_012734532.1;transl_table=11 NZ_CP100136.1 RefSeq gene 455373 456605 . + . ID=gene-NIV78_RS02245;Name=NIV78_RS02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02245 NZ_CP100136.1 Protein Homology CDS 455373 456605 . + 0 ID=cds-WP_012734533.1;Parent=gene-NIV78_RS02245;Dbxref=Genbank:WP_012734533.1;Name=WP_012734533.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327838.1;locus_tag=NIV78_RS02245;product=MltA domain-containing protein;protein_id=WP_012734533.1;transl_table=11 NZ_CP100136.1 RefSeq gene 456655 457950 . - . ID=gene-NIV78_RS02250;Name=paaF;gbkey=Gene;gene=paaF;gene_biotype=protein_coding;locus_tag=NIV78_RS02250 NZ_CP100136.1 Protein Homology CDS 456655 457950 . - 0 ID=cds-WP_017923486.1;Parent=gene-NIV78_RS02250;Dbxref=Genbank:WP_017923486.1;Name=WP_017923486.1;Ontology_term=GO:0010124,GO:0047475;gbkey=CDS;gene=paaF;go_function=phenylacetate-CoA ligase activity|0047475||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734534.1;locus_tag=NIV78_RS02250;product=phenylacetate--CoA ligase;protein_id=WP_017923486.1;transl_table=11 NZ_CP100136.1 RefSeq gene 457993 458472 . - . ID=gene-NIV78_RS02255;Name=paaI;gbkey=Gene;gene=paaI;gene_biotype=protein_coding;locus_tag=NIV78_RS02255 NZ_CP100136.1 Protein Homology CDS 457993 458472 . - 0 ID=cds-WP_012734535.1;Parent=gene-NIV78_RS02255;Dbxref=Genbank:WP_012734535.1;Name=WP_012734535.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaI;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734535.1;locus_tag=NIV78_RS02255;product=hydroxyphenylacetyl-CoA thioesterase PaaI;protein_id=WP_012734535.1;transl_table=11 NZ_CP100136.1 RefSeq gene 458474 459265 . - . ID=gene-NIV78_RS02260;Name=paaG;gbkey=Gene;gene=paaG;gene_biotype=protein_coding;locus_tag=NIV78_RS02260 NZ_CP100136.1 Protein Homology CDS 458474 459265 . - 0 ID=cds-WP_012734536.1;Parent=gene-NIV78_RS02260;Dbxref=Genbank:WP_012734536.1;Name=WP_012734536.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaG;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006029796.1;locus_tag=NIV78_RS02260;product=2-(1%2C2-epoxy-1%2C2-dihydrophenyl)acetyl-CoA isomerase PaaG;protein_id=WP_012734536.1;transl_table=11 NZ_CP100136.1 RefSeq gene 459326 461020 . - . ID=gene-NIV78_RS02265;Name=paaN;gbkey=Gene;gene=paaN;gene_biotype=protein_coding;locus_tag=NIV78_RS02265 NZ_CP100136.1 Protein Homology CDS 459326 461020 . - 0 ID=cds-WP_251107234.1;Parent=gene-NIV78_RS02265;Dbxref=Genbank:WP_251107234.1;Name=WP_251107234.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaN;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734537.1;locus_tag=NIV78_RS02265;product=phenylacetic acid degradation protein PaaN;protein_id=WP_251107234.1;transl_table=11 NZ_CP100136.1 RefSeq gene 461156 461932 . + . ID=gene-NIV78_RS02270;Name=NIV78_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02270 NZ_CP100136.1 Protein Homology CDS 461156 461932 . + 0 ID=cds-WP_017923488.1;Parent=gene-NIV78_RS02270;Dbxref=Genbank:WP_017923488.1;Name=WP_017923488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008918651.1;locus_tag=NIV78_RS02270;product=enoyl-CoA hydratase;protein_id=WP_017923488.1;transl_table=11 NZ_CP100136.1 RefSeq gene 462530 464062 . + . ID=gene-NIV78_RS02275;Name=NIV78_RS02275;gbkey=Gene;gene_biotype=rRNA;locus_tag=NIV78_RS02275 NZ_CP100136.1 cmsearch rRNA 462530 464062 . + . ID=rna-NIV78_RS02275;Parent=gene-NIV78_RS02275;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS02275;product=16S ribosomal RNA NZ_CP100136.1 cmsearch exon 462530 464062 . + . ID=exon-NIV78_RS02275-1;Parent=rna-NIV78_RS02275;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS02275;product=16S ribosomal RNA NZ_CP100136.1 RefSeq gene 464126 464202 . + . ID=gene-NIV78_RS02280;Name=NIV78_RS02280;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS02280 NZ_CP100136.1 tRNAscan-SE tRNA 464126 464202 . + . ID=rna-NIV78_RS02280;Parent=gene-NIV78_RS02280;anticodon=(pos:464160..464162);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS02280;product=tRNA-Ile NZ_CP100136.1 tRNAscan-SE exon 464126 464202 . + . ID=exon-NIV78_RS02280-1;Parent=rna-NIV78_RS02280;anticodon=(pos:464160..464162);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS02280;product=tRNA-Ile NZ_CP100136.1 RefSeq gene 464243 464318 . + . ID=gene-NIV78_RS02285;Name=NIV78_RS02285;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS02285 NZ_CP100136.1 tRNAscan-SE tRNA 464243 464318 . + . ID=rna-NIV78_RS02285;Parent=gene-NIV78_RS02285;anticodon=(pos:464276..464278);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS02285;product=tRNA-Ala NZ_CP100136.1 tRNAscan-SE exon 464243 464318 . + . ID=exon-NIV78_RS02285-1;Parent=rna-NIV78_RS02285;anticodon=(pos:464276..464278);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS02285;product=tRNA-Ala NZ_CP100136.1 RefSeq gene 464623 467499 . + . ID=gene-NIV78_RS02290;Name=NIV78_RS02290;gbkey=Gene;gene_biotype=rRNA;locus_tag=NIV78_RS02290 NZ_CP100136.1 cmsearch rRNA 464623 467499 . + . ID=rna-NIV78_RS02290;Parent=gene-NIV78_RS02290;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS02290;product=23S ribosomal RNA NZ_CP100136.1 cmsearch exon 464623 467499 . + . ID=exon-NIV78_RS02290-1;Parent=rna-NIV78_RS02290;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS02290;product=23S ribosomal RNA NZ_CP100136.1 RefSeq gene 467639 467752 . + . ID=gene-NIV78_RS02295;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=NIV78_RS02295 NZ_CP100136.1 cmsearch rRNA 467639 467752 . + . ID=rna-NIV78_RS02295;Parent=gene-NIV78_RS02295;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS02295;product=5S ribosomal RNA NZ_CP100136.1 cmsearch exon 467639 467752 . + . ID=exon-NIV78_RS02295-1;Parent=rna-NIV78_RS02295;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS02295;product=5S ribosomal RNA NZ_CP100136.1 RefSeq gene 468065 469738 . + . ID=gene-NIV78_RS02300;Name=NIV78_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02300 NZ_CP100136.1 Protein Homology CDS 468065 469738 . + 0 ID=cds-WP_017922512.1;Parent=gene-NIV78_RS02300;Dbxref=Genbank:WP_017922512.1;Name=WP_017922512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898193.1;locus_tag=NIV78_RS02300;product=long-chain fatty acid--CoA ligase;protein_id=WP_017922512.1;transl_table=11 NZ_CP100136.1 RefSeq gene 470055 470684 . + . ID=gene-NIV78_RS02305;Name=coq7;gbkey=Gene;gene=coq7;gene_biotype=protein_coding;locus_tag=NIV78_RS02305 NZ_CP100136.1 Protein Homology CDS 470055 470684 . + 0 ID=cds-WP_012734540.1;Parent=gene-NIV78_RS02305;Dbxref=Genbank:WP_012734540.1;Name=WP_012734540.1;Ontology_term=GO:0006744,GO:0004497;gbkey=CDS;gene=coq7;go_function=monooxygenase activity|0004497||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106632.1;locus_tag=NIV78_RS02305;product=2-polyprenyl-3-methyl-6-methoxy-1%2C4-benzoquinone monooxygenase;protein_id=WP_012734540.1;transl_table=11 NZ_CP100136.1 RefSeq gene 471059 471487 . + . ID=gene-NIV78_RS02310;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=NIV78_RS02310 NZ_CP100136.1 Protein Homology CDS 471059 471487 . + 0 ID=cds-WP_012734541.1;Parent=gene-NIV78_RS02310;Dbxref=Genbank:WP_012734541.1;Name=WP_012734541.1;Ontology_term=GO:0051302,GO:0043565;gbkey=CDS;gene=mraZ;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of cell division|0051302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255554.1;locus_tag=NIV78_RS02310;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_012734541.1;transl_table=11 NZ_CP100136.1 RefSeq gene 471511 472452 . + . ID=gene-NIV78_RS02315;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=NIV78_RS02315 NZ_CP100136.1 Protein Homology CDS 471511 472452 . + 0 ID=cds-WP_012734542.1;Parent=gene-NIV78_RS02315;Dbxref=Genbank:WP_012734542.1;Name=WP_012734542.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350832.1;locus_tag=NIV78_RS02315;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_012734542.1;transl_table=11 NZ_CP100136.1 RefSeq gene 472449 472784 . + . ID=gene-NIV78_RS02320;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=NIV78_RS02320 NZ_CP100136.1 Protein Homology CDS 472449 472784 . + 0 ID=cds-WP_012734543.1;Parent=gene-NIV78_RS02320;Dbxref=Genbank:WP_012734543.1;Name=WP_012734543.1;Ontology_term=GO:0000910,GO:0016021;gbkey=CDS;gene=ftsL;go_component=integral component of membrane|0016021||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898189.1;locus_tag=NIV78_RS02320;product=cell division protein FtsL;protein_id=WP_012734543.1;transl_table=11 NZ_CP100136.1 RefSeq gene 472781 474619 . + . ID=gene-NIV78_RS02325;Name=NIV78_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02325 NZ_CP100136.1 Protein Homology CDS 472781 474619 . + 0 ID=cds-WP_012734544.1;Parent=gene-NIV78_RS02325;Dbxref=Genbank:WP_012734544.1;Name=WP_012734544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544496.1;locus_tag=NIV78_RS02325;product=penicillin-binding protein 2;protein_id=WP_012734544.1;transl_table=11 NZ_CP100136.1 RefSeq gene 474616 476163 . + . ID=gene-NIV78_RS02330;Name=NIV78_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02330 NZ_CP100136.1 Protein Homology CDS 474616 476163 . + 0 ID=cds-WP_017922511.1;Parent=gene-NIV78_RS02330;Dbxref=Genbank:WP_017922511.1;Name=WP_017922511.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602111.1;locus_tag=NIV78_RS02330;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_017922511.1;transl_table=11 NZ_CP100136.1 RefSeq gene 476160 477566 . + . ID=gene-NIV78_RS02335;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=NIV78_RS02335 NZ_CP100136.1 Protein Homology CDS 476160 477566 . + 0 ID=cds-WP_017922510.1;Parent=gene-NIV78_RS02335;Dbxref=Genbank:WP_017922510.1;Name=WP_017922510.1;Ontology_term=GO:0009252,GO:0047480;gbkey=CDS;gene=murF;go_function=UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333460.1;locus_tag=NIV78_RS02335;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_017922510.1;transl_table=11 NZ_CP100136.1 RefSeq gene 477581 478750 . + . ID=gene-NIV78_RS02340;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=NIV78_RS02340 NZ_CP100136.1 Protein Homology CDS 477581 478750 . + 0 ID=cds-WP_012734547.1;Parent=gene-NIV78_RS02340;Dbxref=Genbank:WP_012734547.1;Name=WP_012734547.1;Ontology_term=GO:0009252,GO:0008963;gbkey=CDS;gene=mraY;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477019.1;locus_tag=NIV78_RS02340;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_012734547.1;transl_table=11 NZ_CP100136.1 RefSeq gene 478776 480287 . + . ID=gene-NIV78_RS02345;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=NIV78_RS02345 NZ_CP100136.1 Protein Homology CDS 478776 480287 . + 0 ID=cds-WP_017922509.1;Parent=gene-NIV78_RS02345;Dbxref=Genbank:WP_017922509.1;Name=WP_017922509.1;Ontology_term=GO:0009252,GO:0008764;gbkey=CDS;gene=murD;go_function=UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601979.1;locus_tag=NIV78_RS02345;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_017922509.1;transl_table=11 NZ_CP100136.1 RefSeq gene 480284 481561 . + . ID=gene-NIV78_RS02350;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=NIV78_RS02350 NZ_CP100136.1 Protein Homology CDS 480284 481561 . + 0 ID=cds-WP_012734549.1;Parent=gene-NIV78_RS02350;Dbxref=Genbank:WP_012734549.1;Name=WP_012734549.1;Ontology_term=GO:0009252,GO:0051301,GO:0003674,GO:0016021;gbkey=CDS;gene=ftsW;go_component=integral component of membrane|0016021||IEA;go_function=molecular_function|0003674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600547.1;locus_tag=NIV78_RS02350;product=putative lipid II flippase FtsW;protein_id=WP_012734549.1;transl_table=11 NZ_CP100136.1 RefSeq gene 481558 482661 . + . ID=gene-NIV78_RS02355;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=NIV78_RS02355 NZ_CP100136.1 Protein Homology CDS 481558 482661 . + 0 ID=cds-WP_012734550.1;Parent=gene-NIV78_RS02355;Dbxref=Genbank:WP_012734550.1;Name=WP_012734550.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734550.1;locus_tag=NIV78_RS02355;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_012734550.1;transl_table=11 NZ_CP100136.1 RefSeq gene 482658 484058 . + . ID=gene-NIV78_RS02360;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=NIV78_RS02360 NZ_CP100136.1 Protein Homology CDS 482658 484058 . + 0 ID=cds-WP_012734551.1;Parent=gene-NIV78_RS02360;Dbxref=Genbank:WP_012734551.1;Name=WP_012734551.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734551.1;locus_tag=NIV78_RS02360;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_012734551.1;transl_table=11 NZ_CP100136.1 RefSeq gene 484060 485001 . + . ID=gene-NIV78_RS02365;Name=NIV78_RS02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02365 NZ_CP100136.1 Protein Homology CDS 484060 485001 . + 0 ID=cds-WP_012734552.1;Parent=gene-NIV78_RS02365;Dbxref=Genbank:WP_012734552.1;Name=WP_012734552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011489915.1;locus_tag=NIV78_RS02365;product=D-alanine--D-alanine ligase;protein_id=WP_012734552.1;transl_table=11 NZ_CP100136.1 RefSeq gene 485022 485774 . + . ID=gene-NIV78_RS02370;Name=NIV78_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02370 NZ_CP100136.1 Protein Homology CDS 485022 485774 . + 0 ID=cds-WP_012734553.1;Parent=gene-NIV78_RS02370;Dbxref=Genbank:WP_012734553.1;Name=WP_012734553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522020.1;locus_tag=NIV78_RS02370;product=cell division protein FtsQ/DivIB;protein_id=WP_012734553.1;transl_table=11 NZ_CP100136.1 RefSeq gene 485800 487032 . + . ID=gene-NIV78_RS02375;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=NIV78_RS02375 NZ_CP100136.1 Protein Homology CDS 485800 487032 . + 0 ID=cds-WP_012734554.1;Parent=gene-NIV78_RS02375;Dbxref=Genbank:WP_012734554.1;Name=WP_012734554.1;Ontology_term=GO:0043093,GO:0005515,GO:0005524;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898179.1;locus_tag=NIV78_RS02375;product=cell division protein FtsA;protein_id=WP_012734554.1;transl_table=11 NZ_CP100136.1 RefSeq gene 487136 488329 . + . ID=gene-NIV78_RS02380;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=NIV78_RS02380 NZ_CP100136.1 Protein Homology CDS 487136 488329 . + 0 ID=cds-WP_012734555.1;Parent=gene-NIV78_RS02380;Dbxref=Genbank:WP_012734555.1;Name=WP_012734555.1;Ontology_term=GO:0000910,GO:0003924;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020071225.1;locus_tag=NIV78_RS02380;product=cell division protein FtsZ;protein_id=WP_012734555.1;transl_table=11 NZ_CP100136.1 RefSeq gene 488504 489010 . + . ID=gene-NIV78_RS02385;Name=NIV78_RS02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02385 NZ_CP100136.1 Protein Homology CDS 488504 489010 . + 0 ID=cds-WP_012734556.1;Parent=gene-NIV78_RS02385;Dbxref=Genbank:WP_012734556.1;Name=WP_012734556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522021.1;locus_tag=NIV78_RS02385;product=peroxiredoxin;protein_id=WP_012734556.1;transl_table=11 NZ_CP100136.1 RefSeq gene 489262 490179 . + . ID=gene-NIV78_RS02390;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=NIV78_RS02390 NZ_CP100136.1 Protein Homology CDS 489262 490179 . + 0 ID=cds-WP_043224960.1;Parent=gene-NIV78_RS02390;Dbxref=Genbank:WP_043224960.1;Name=WP_043224960.1;Ontology_term=GO:0009245,GO:0008759;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity|0008759||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106607.1;locus_tag=NIV78_RS02390;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_043224960.1;transl_table=11 NZ_CP100136.1 RefSeq gene 490271 490780 . - . ID=gene-NIV78_RS02395;Name=NIV78_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02395 NZ_CP100136.1 Protein Homology CDS 490271 490780 . - 0 ID=cds-WP_017922507.1;Parent=gene-NIV78_RS02395;Dbxref=Genbank:WP_017922507.1;Name=WP_017922507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734558.1;locus_tag=NIV78_RS02395;product=DUF721 domain-containing protein;protein_id=WP_017922507.1;transl_table=11 NZ_CP100136.1 RefSeq gene 491163 493952 . + . ID=gene-NIV78_RS02400;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=NIV78_RS02400 NZ_CP100136.1 Protein Homology CDS 491163 493952 . + 0 ID=cds-WP_012734559.1;Parent=gene-NIV78_RS02400;Dbxref=Genbank:WP_012734559.1;Name=WP_012734559.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544506.1;locus_tag=NIV78_RS02400;product=preprotein translocase subunit SecA;protein_id=WP_012734559.1;transl_table=11 NZ_CP100136.1 RefSeq gene 494155 495396 . + . ID=gene-NIV78_RS02405;Name=argJ;gbkey=Gene;gene=argJ;gene_biotype=protein_coding;locus_tag=NIV78_RS02405 NZ_CP100136.1 Protein Homology CDS 494155 495396 . + 0 ID=cds-WP_012734560.1;Parent=gene-NIV78_RS02405;Dbxref=Genbank:WP_012734560.1;Name=WP_012734560.1;Ontology_term=GO:0006526,GO:0004358;gbkey=CDS;gene=argJ;go_function=glutamate N-acetyltransferase activity|0004358||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333474.1;locus_tag=NIV78_RS02405;product=bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ;protein_id=WP_012734560.1;transl_table=11 NZ_CP100136.1 RefSeq gene 495461 496330 . + . ID=gene-NIV78_RS02410;Name=NIV78_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02410 NZ_CP100136.1 Protein Homology CDS 495461 496330 . + 0 ID=cds-WP_012734561.1;Parent=gene-NIV78_RS02410;Dbxref=Genbank:WP_012734561.1;Name=WP_012734561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350849.1;locus_tag=NIV78_RS02410;product=ATP-binding protein;protein_id=WP_012734561.1;transl_table=11 NZ_CP100136.1 RefSeq gene 496327 496767 . + . ID=gene-NIV78_RS02415;Name=NIV78_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02415 NZ_CP100136.1 Protein Homology CDS 496327 496767 . + 0 ID=cds-WP_257757150.1;Parent=gene-NIV78_RS02415;Dbxref=Genbank:WP_257757150.1;Name=WP_257757150.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734562.1;locus_tag=NIV78_RS02415;product=NUDIX domain-containing protein;protein_id=WP_257757150.1;transl_table=11 NZ_CP100136.1 RefSeq gene 496826 497035 . - . ID=gene-NIV78_RS02420;Name=NIV78_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02420 NZ_CP100136.1 Protein Homology CDS 496826 497035 . - 0 ID=cds-WP_012734563.1;Parent=gene-NIV78_RS02420;Dbxref=Genbank:WP_012734563.1;Name=WP_012734563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734563.1;locus_tag=NIV78_RS02420;product=DNA gyrase inhibitor YacG;protein_id=WP_012734563.1;transl_table=11 NZ_CP100136.1 RefSeq gene 497043 497798 . - . ID=gene-NIV78_RS02425;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=NIV78_RS02425 NZ_CP100136.1 Protein Homology CDS 497043 497798 . - 0 ID=cds-WP_012734564.1;Parent=gene-NIV78_RS02425;Dbxref=Genbank:WP_012734564.1;Name=WP_012734564.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756831.1;locus_tag=NIV78_RS02425;product=cell division protein ZapD;protein_id=WP_012734564.1;transl_table=11 NZ_CP100136.1 RefSeq gene 497946 498554 . - . ID=gene-NIV78_RS02430;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=NIV78_RS02430 NZ_CP100136.1 Protein Homology CDS 497946 498554 . - 0 ID=cds-WP_012734565.1;Parent=gene-NIV78_RS02430;Dbxref=Genbank:WP_012734565.1;Name=WP_012734565.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734565.1;locus_tag=NIV78_RS02430;product=dephospho-CoA kinase;protein_id=WP_012734565.1;transl_table=11 NZ_CP100136.1 RefSeq gene 498559 499449 . - . ID=gene-NIV78_RS02435;Name=NIV78_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02435 NZ_CP100136.1 Protein Homology CDS 498559 499449 . - 0 ID=cds-WP_017923978.1;Parent=gene-NIV78_RS02435;Dbxref=Genbank:WP_017923978.1;Name=WP_017923978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734566.1;locus_tag=NIV78_RS02435;product=A24 family peptidase;protein_id=WP_017923978.1;transl_table=11 NZ_CP100136.1 RefSeq gene 499503 500711 . - . ID=gene-NIV78_RS02440;Name=NIV78_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02440 NZ_CP100136.1 Protein Homology CDS 499503 500711 . - 0 ID=cds-WP_100555664.1;Parent=gene-NIV78_RS02440;Dbxref=Genbank:WP_100555664.1;Name=WP_100555664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734567.1;locus_tag=NIV78_RS02440;product=type II secretion system F family protein;protein_id=WP_100555664.1;transl_table=11 NZ_CP100136.1 RefSeq gene 500708 501934 . - . ID=gene-NIV78_RS02445;Name=NIV78_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02445 NZ_CP100136.1 Protein Homology CDS 500708 501934 . - 0 ID=cds-WP_100555665.1;Parent=gene-NIV78_RS02445;Dbxref=Genbank:WP_100555665.1;Name=WP_100555665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350856.1;locus_tag=NIV78_RS02445;product=ATPase%2C T2SS/T4P/T4SS family;protein_id=WP_100555665.1;transl_table=11 NZ_CP100136.1 RefSeq gene 502090 503385 . - . ID=gene-NIV78_RS02450;Name=NIV78_RS02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02450 NZ_CP100136.1 Protein Homology CDS 502090 503385 . - 0 ID=cds-WP_012734569.1;Parent=gene-NIV78_RS02450;Dbxref=Genbank:WP_012734569.1;Name=WP_012734569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734569.1;locus_tag=NIV78_RS02450;product=HlyC/CorC family transporter;protein_id=WP_012734569.1;transl_table=11 NZ_CP100136.1 RefSeq gene 503541 503617 . - . ID=gene-NIV78_RS02455;Name=NIV78_RS02455;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS02455 NZ_CP100136.1 tRNAscan-SE tRNA 503541 503617 . - . ID=rna-NIV78_RS02455;Parent=gene-NIV78_RS02455;anticodon=(pos:complement(503581..503583));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS02455;product=tRNA-Pro NZ_CP100136.1 tRNAscan-SE exon 503541 503617 . - . ID=exon-NIV78_RS02455-1;Parent=rna-NIV78_RS02455;anticodon=(pos:complement(503581..503583));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS02455;product=tRNA-Pro NZ_CP100136.1 RefSeq gene 503648 504640 . - . ID=gene-NIV78_RS02460;Name=NIV78_RS02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02460 NZ_CP100136.1 Protein Homology CDS 503648 504640 . - 0 ID=cds-WP_043225088.1;Parent=gene-NIV78_RS02460;Dbxref=Genbank:WP_043225088.1;Name=WP_043225088.1;Ontology_term=GO:0008299;gbkey=CDS;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527775.1;locus_tag=NIV78_RS02460;product=polyprenyl synthetase family protein;protein_id=WP_043225088.1;transl_table=11 NZ_CP100136.1 RefSeq gene 504962 505273 . + . ID=gene-NIV78_RS02465;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=NIV78_RS02465 NZ_CP100136.1 Protein Homology CDS 504962 505273 . + 0 ID=cds-WP_004194344.1;Parent=gene-NIV78_RS02465;Dbxref=Genbank:WP_004194344.1;Name=WP_004194344.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplU;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011002728.1;locus_tag=NIV78_RS02465;product=50S ribosomal protein L21;protein_id=WP_004194344.1;transl_table=11 NZ_CP100136.1 RefSeq gene 505298 505561 . + . ID=gene-NIV78_RS02470;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=NIV78_RS02470 NZ_CP100136.1 Protein Homology CDS 505298 505561 . + 0 ID=cds-WP_017423638.1;Parent=gene-NIV78_RS02470;Dbxref=Genbank:WP_017423638.1;Name=WP_017423638.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194025.1;locus_tag=NIV78_RS02470;product=50S ribosomal protein L27;protein_id=WP_017423638.1;transl_table=11 NZ_CP100136.1 RefSeq gene 505744 506865 . + . ID=gene-NIV78_RS02475;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=NIV78_RS02475 NZ_CP100136.1 Protein Homology CDS 505744 506865 . + 0 ID=cds-WP_017922644.1;Parent=gene-NIV78_RS02475;Dbxref=Genbank:WP_017922644.1;Name=WP_017922644.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=obgE;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734572.1;locus_tag=NIV78_RS02475;product=GTPase ObgE;protein_id=WP_017922644.1;transl_table=11 NZ_CP100136.1 RefSeq gene 507032 508150 . + . ID=gene-NIV78_RS02480;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=NIV78_RS02480 NZ_CP100136.1 Protein Homology CDS 507032 508150 . + 0 ID=cds-WP_012734573.1;Parent=gene-NIV78_RS02480;Dbxref=Genbank:WP_012734573.1;Name=WP_012734573.1;Ontology_term=GO:0006561,GO:0004349;gbkey=CDS;gene=proB;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013340556.1;locus_tag=NIV78_RS02480;product=glutamate 5-kinase;protein_id=WP_012734573.1;transl_table=11 NZ_CP100136.1 RefSeq gene 508244 508813 . - . ID=gene-NIV78_RS02485;Name=NIV78_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02485 NZ_CP100136.1 Protein Homology CDS 508244 508813 . - 0 ID=cds-WP_026051432.1;Parent=gene-NIV78_RS02485;Dbxref=Genbank:WP_026051432.1;Name=WP_026051432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601058.1;locus_tag=NIV78_RS02485;product=CNP1-like family protein;protein_id=WP_026051432.1;transl_table=11 NZ_CP100136.1 RefSeq gene 508894 509526 . - . ID=gene-NIV78_RS02490;Name=NIV78_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02490 NZ_CP100136.1 Protein Homology CDS 508894 509526 . - 0 ID=cds-WP_012734575.1;Parent=gene-NIV78_RS02490;Dbxref=Genbank:WP_012734575.1;Name=WP_012734575.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600224.1;locus_tag=NIV78_RS02490;product=RNA pyrophosphohydrolase;protein_id=WP_012734575.1;transl_table=11 NZ_CP100136.1 RefSeq gene 509746 511482 . + . ID=gene-NIV78_RS02495;Name=NIV78_RS02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02495 NZ_CP100136.1 Protein Homology CDS 509746 511482 . + 0 ID=cds-WP_012734576.1;Parent=gene-NIV78_RS02495;Dbxref=Genbank:WP_012734576.1;Name=WP_012734576.1;Ontology_term=GO:0006418,GO:0006433,GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA editing activity|0002161||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA,prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012434396.1;locus_tag=NIV78_RS02495;product=proline--tRNA ligase;protein_id=WP_012734576.1;transl_table=11 NZ_CP100136.1 RefSeq gene 511556 512158 . + . ID=gene-NIV78_RS02500;Name=NIV78_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02500 NZ_CP100136.1 Protein Homology CDS 511556 512158 . + 0 ID=cds-WP_012734577.1;Parent=gene-NIV78_RS02500;Dbxref=Genbank:WP_012734577.1;Name=WP_012734577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194061.1;locus_tag=NIV78_RS02500;product=MarC family protein;protein_id=WP_012734577.1;transl_table=11 NZ_CP100136.1 RefSeq gene 512272 512823 . - . ID=gene-NIV78_RS02505;Name=NIV78_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02505 NZ_CP100136.1 Protein Homology CDS 512272 512823 . - 0 ID=cds-WP_012734578.1;Parent=gene-NIV78_RS02505;Dbxref=Genbank:WP_012734578.1;Name=WP_012734578.1;Ontology_term=GO:0009116;gbkey=CDS;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016346290.1;locus_tag=NIV78_RS02505;product=hypoxanthine-guanine phosphoribosyltransferase;protein_id=WP_012734578.1;transl_table=11 NZ_CP100136.1 RefSeq gene 512960 514327 . - . ID=gene-NIV78_RS02510;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=NIV78_RS02510 NZ_CP100136.1 Protein Homology CDS 512960 514327 . - 0 ID=cds-WP_017423639.1;Parent=gene-NIV78_RS02510;Dbxref=Genbank:WP_017423639.1;Name=WP_017423639.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194338.1;locus_tag=NIV78_RS02510;product=signal recognition particle protein;protein_id=WP_017423639.1;transl_table=11 NZ_CP100136.1 RefSeq gene 514415 515314 . + . ID=gene-NIV78_RS02515;Name=ccsA;gbkey=Gene;gene=ccsA;gene_biotype=protein_coding;locus_tag=NIV78_RS02515 NZ_CP100136.1 Protein Homology CDS 514415 515314 . + 0 ID=cds-WP_012734580.1;Parent=gene-NIV78_RS02515;Dbxref=Genbank:WP_012734580.1;Name=WP_012734580.1;Ontology_term=GO:0017004,GO:0020037;gbkey=CDS;gene=ccsA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004538773.1;locus_tag=NIV78_RS02515;product=cytochrome c biogenesis protein CcsA;protein_id=WP_012734580.1;transl_table=11 NZ_CP100136.1 RefSeq gene 515328 515615 . + . ID=gene-NIV78_RS02520;Name=NIV78_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02520 NZ_CP100136.1 Protein Homology CDS 515328 515615 . + 0 ID=cds-WP_012734581.1;Parent=gene-NIV78_RS02520;Dbxref=Genbank:WP_012734581.1;Name=WP_012734581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734581.1;locus_tag=NIV78_RS02520;product=PP0621 family protein;protein_id=WP_012734581.1;transl_table=11 NZ_CP100136.1 RefSeq gene 515612 516193 . + . ID=gene-NIV78_RS02525;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=NIV78_RS02525 NZ_CP100136.1 Protein Homology CDS 515612 516193 . + 0 ID=cds-WP_012734582.1;Parent=gene-NIV78_RS02525;Dbxref=Genbank:WP_012734582.1;Name=WP_012734582.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423641.1;locus_tag=NIV78_RS02525;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_012734582.1;transl_table=11 NZ_CP100136.1 RefSeq gene 516652 519651 . + . ID=gene-NIV78_RS02530;Name=NIV78_RS02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02530 NZ_CP100136.1 Protein Homology CDS 516652 519651 . + 0 ID=cds-WP_012734583.1;Parent=gene-NIV78_RS02530;Dbxref=Genbank:WP_012734583.1;Name=WP_012734583.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194230.1;locus_tag=NIV78_RS02530;product=ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_012734583.1;transl_table=11 NZ_CP100136.1 RefSeq gene 520008 521231 . + . ID=gene-NIV78_RS02535;Name=NIV78_RS02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02535 NZ_CP100136.1 Protein Homology CDS 520008 521231 . + 0 ID=cds-WP_012734584.1;Parent=gene-NIV78_RS02535;Dbxref=Genbank:WP_012734584.1;Name=WP_012734584.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194129.1;locus_tag=NIV78_RS02535;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_012734584.1;transl_table=11 NZ_CP100136.1 RefSeq gene 521663 522289 . + . ID=gene-NIV78_RS02540;Name=NIV78_RS02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02540 NZ_CP100136.1 Protein Homology CDS 521663 522289 . + 0 ID=cds-WP_017923607.1;Parent=gene-NIV78_RS02540;Dbxref=Genbank:WP_017923607.1;Name=WP_017923607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400402.1;locus_tag=NIV78_RS02540;product=histone H1-like DNA-binding protein;protein_id=WP_017923607.1;transl_table=11 NZ_CP100136.1 RefSeq gene 522534 523010 . - . ID=gene-NIV78_RS02545;Name=NIV78_RS02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02545 NZ_CP100136.1 Protein Homology CDS 522534 523010 . - 0 ID=cds-WP_012734587.1;Parent=gene-NIV78_RS02545;Dbxref=Genbank:WP_012734587.1;Name=WP_012734587.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601283.1;locus_tag=NIV78_RS02545;product=glycine zipper 2TM domain-containing protein;protein_id=WP_012734587.1;transl_table=11 NZ_CP100136.1 RefSeq gene 523033 523971 . - . ID=gene-NIV78_RS02550;Name=NIV78_RS02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02550 NZ_CP100136.1 Protein Homology CDS 523033 523971 . - 0 ID=cds-WP_012734588.1;Parent=gene-NIV78_RS02550;Dbxref=Genbank:WP_012734588.1;Name=WP_012734588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602176.1;locus_tag=NIV78_RS02550;product=carbohydrate kinase family protein;protein_id=WP_012734588.1;transl_table=11 NZ_CP100136.1 RefSeq gene 524070 524573 . - . ID=gene-NIV78_RS02555;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=NIV78_RS02555 NZ_CP100136.1 Protein Homology CDS 524070 524573 . - 0 ID=cds-WP_017923606.1;Parent=gene-NIV78_RS02555;Dbxref=Genbank:WP_017923606.1;Name=WP_017923606.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765230.1;locus_tag=NIV78_RS02555;product=thiol peroxidase;protein_id=WP_017923606.1;transl_table=11 NZ_CP100136.1 RefSeq gene 524668 526062 . - . ID=gene-NIV78_RS02560;Name=NIV78_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02560 NZ_CP100136.1 Protein Homology CDS 524668 526062 . - 0 ID=cds-WP_161521240.1;Parent=gene-NIV78_RS02560;Dbxref=Genbank:WP_161521240.1;Name=WP_161521240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194178.1;locus_tag=NIV78_RS02560;product=zinc-ribbon domain-containing protein;protein_id=WP_161521240.1;transl_table=11 NZ_CP100136.1 RefSeq gene 526108 527010 . - . ID=gene-NIV78_RS02565;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=NIV78_RS02565 NZ_CP100136.1 Protein Homology CDS 526108 527010 . - 0 ID=cds-WP_017923029.1;Parent=gene-NIV78_RS02565;Dbxref=Genbank:WP_017923029.1;Name=WP_017923029.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490720.1;locus_tag=NIV78_RS02565;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_017923029.1;transl_table=11 NZ_CP100136.1 RefSeq gene 527013 528380 . - . ID=gene-NIV78_RS02570;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=NIV78_RS02570 NZ_CP100136.1 Protein Homology CDS 527013 528380 . - 0 ID=cds-WP_012734592.1;Parent=gene-NIV78_RS02570;Dbxref=Genbank:WP_012734592.1;Name=WP_012734592.1;Ontology_term=GO:0006633,GO:0003989,GO:0004075,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,biotin carboxylase activity|0004075||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017777083.1;locus_tag=NIV78_RS02570;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_012734592.1;transl_table=11 NZ_CP100136.1 RefSeq gene 528436 528903 . - . ID=gene-NIV78_RS02575;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=NIV78_RS02575 NZ_CP100136.1 Protein Homology CDS 528436 528903 . - 0 ID=cds-WP_012734593.1;Parent=gene-NIV78_RS02575;Dbxref=Genbank:WP_012734593.1;Name=WP_012734593.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009888964.1;locus_tag=NIV78_RS02575;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_012734593.1;transl_table=11 NZ_CP100136.1 RefSeq gene 528973 529425 . - . ID=gene-NIV78_RS02580;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=NIV78_RS02580 NZ_CP100136.1 Protein Homology CDS 528973 529425 . - 0 ID=cds-WP_012734594.1;Parent=gene-NIV78_RS02580;Dbxref=Genbank:WP_012734594.1;Name=WP_012734594.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756005.1;locus_tag=NIV78_RS02580;product=type II 3-dehydroquinate dehydratase;protein_id=WP_012734594.1;transl_table=11 NZ_CP100136.1 RefSeq gene 529619 530164 . - . ID=gene-NIV78_RS02585;Name=NIV78_RS02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02585 NZ_CP100136.1 Protein Homology CDS 529619 530164 . - 0 ID=cds-WP_017423061.1;Parent=gene-NIV78_RS02585;Dbxref=Genbank:WP_017423061.1;Name=WP_017423061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423061.1;locus_tag=NIV78_RS02585;product=TlpA family protein disulfide reductase;protein_id=WP_017423061.1;transl_table=11 NZ_CP100136.1 RefSeq gene 530154 530816 . - . ID=gene-NIV78_RS02590;Name=NIV78_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02590 NZ_CP100136.1 Protein Homology CDS 530154 530816 . - 0 ID=cds-WP_012734596.1;Parent=gene-NIV78_RS02590;Dbxref=Genbank:WP_012734596.1;Name=WP_012734596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734596.1;locus_tag=NIV78_RS02590;product=hypothetical protein;protein_id=WP_012734596.1;transl_table=11 NZ_CP100136.1 RefSeq gene 531095 532507 . + . ID=gene-NIV78_RS02595;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=NIV78_RS02595 NZ_CP100136.1 Protein Homology CDS 531095 532507 . + 0 ID=cds-WP_012734597.1;Parent=gene-NIV78_RS02595;Dbxref=Genbank:WP_012734597.1;Name=WP_012734597.1;Ontology_term=GO:0009252,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018006316.1;locus_tag=NIV78_RS02595;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_012734597.1;transl_table=11 NZ_CP100136.1 RefSeq gene 532504 533082 . + . ID=gene-NIV78_RS02600;Name=NIV78_RS02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02600 NZ_CP100136.1 Protein Homology CDS 532504 533082 . + 0 ID=cds-WP_012734598.1;Parent=gene-NIV78_RS02600;Dbxref=Genbank:WP_012734598.1;Name=WP_012734598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734598.1;locus_tag=NIV78_RS02600;product=esterase;protein_id=WP_012734598.1;transl_table=11 NZ_CP100136.1 RefSeq gene 533199 535292 . + . ID=gene-NIV78_RS02605;Name=NIV78_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02605 NZ_CP100136.1 Protein Homology CDS 533199 535292 . + 0 ID=cds-WP_017923028.1;Parent=gene-NIV78_RS02605;Dbxref=Genbank:WP_017923028.1;Name=WP_017923028.1;Ontology_term=GO:0003723,GO:0004540;gbkey=CDS;go_function=RNA binding|0003723||IEA,ribonuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734599.1;locus_tag=NIV78_RS02605;product=RNB domain-containing ribonuclease;protein_id=WP_017923028.1;transl_table=11 NZ_CP100136.1 RefSeq gene 535324 536193 . + . ID=gene-NIV78_RS02610;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=NIV78_RS02610 NZ_CP100136.1 Protein Homology CDS 535324 536193 . + 0 ID=cds-WP_017923027.1;Parent=gene-NIV78_RS02610;Dbxref=Genbank:WP_017923027.1;Name=WP_017923027.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734600.1;locus_tag=NIV78_RS02610;product=shikimate dehydrogenase;protein_id=WP_017923027.1;transl_table=11 NZ_CP100136.1 RefSeq gene 536224 536982 . + . ID=gene-NIV78_RS02615;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=NIV78_RS02615 NZ_CP100136.1 Protein Homology CDS 536224 536982 . + 0 ID=cds-WP_012734601.1;Parent=gene-NIV78_RS02615;Dbxref=Genbank:WP_012734601.1;Name=WP_012734601.1;Ontology_term=GO:0009252,GO:0009274,GO:0016021;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,integral component of membrane|0016021||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883227.1;locus_tag=NIV78_RS02615;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_012734601.1;transl_table=11 NZ_CP100136.1 RefSeq gene 537385 538290 . + . ID=gene-NIV78_RS02620;Name=NIV78_RS02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02620 NZ_CP100136.1 Protein Homology CDS 537385 538290 . + 0 ID=cds-WP_012734602.1;Parent=gene-NIV78_RS02620;Dbxref=Genbank:WP_012734602.1;Name=WP_012734602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106500.1;locus_tag=NIV78_RS02620;product=IclR family transcriptional regulator;protein_id=WP_012734602.1;transl_table=11 NZ_CP100136.1 RefSeq gene 538287 539294 . + . ID=gene-NIV78_RS02625;Name=NIV78_RS02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02625 NZ_CP100136.1 Protein Homology CDS 538287 539294 . + 0 ID=cds-WP_017923928.1;Parent=gene-NIV78_RS02625;Dbxref=Genbank:WP_017923928.1;Name=WP_017923928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734603.1;locus_tag=NIV78_RS02625;product=2-dehydro-3-deoxygalactonokinase;protein_id=WP_017923928.1;transl_table=11 NZ_CP100136.1 RefSeq gene 539330 540010 . + . ID=gene-NIV78_RS02630;Name=NIV78_RS02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02630 NZ_CP100136.1 Protein Homology CDS 539330 540010 . + 0 ID=cds-WP_017923929.1;Parent=gene-NIV78_RS02630;Dbxref=Genbank:WP_017923929.1;Name=WP_017923929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734604.1;locus_tag=NIV78_RS02630;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;protein_id=WP_017923929.1;transl_table=11 NZ_CP100136.1 RefSeq gene 540007 540786 . + . ID=gene-NIV78_RS02635;Name=NIV78_RS02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02635 NZ_CP100136.1 Protein Homology CDS 540007 540786 . + 0 ID=cds-WP_100555669.1;Parent=gene-NIV78_RS02635;Dbxref=Genbank:WP_100555669.1;Name=WP_100555669.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527760.1;locus_tag=NIV78_RS02635;product=SDR family oxidoreductase;protein_id=WP_100555669.1;transl_table=11 NZ_CP100136.1 RefSeq gene 540915 541910 . + . ID=gene-NIV78_RS02640;Name=NIV78_RS02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02640 NZ_CP100136.1 Protein Homology CDS 540915 541910 . + 0 ID=cds-WP_012734606.1;Parent=gene-NIV78_RS02640;Dbxref=Genbank:WP_012734606.1;Name=WP_012734606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008342889.1;locus_tag=NIV78_RS02640;product=arabinose ABC transporter substrate-binding protein;protein_id=WP_012734606.1;transl_table=11 NZ_CP100136.1 RefSeq gene 542000 543511 . + . ID=gene-NIV78_RS02645;Name=araG;gbkey=Gene;gene=araG;gene_biotype=protein_coding;locus_tag=NIV78_RS02645 NZ_CP100136.1 Protein Homology CDS 542000 543511 . + 0 ID=cds-WP_012734607.1;Parent=gene-NIV78_RS02645;Dbxref=Genbank:WP_012734607.1;Name=WP_012734607.1;Ontology_term=GO:0042882,GO:0005524,GO:0015612,GO:0016020;gbkey=CDS;gene=araG;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type L-arabinose transporter activity|0015612||IEA;go_process=L-arabinose transmembrane transport|0042882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350895.1;locus_tag=NIV78_RS02645;product=L-arabinose ABC transporter ATP-binding protein AraG;protein_id=WP_012734607.1;transl_table=11 NZ_CP100136.1 RefSeq gene 543583 544599 . + . ID=gene-NIV78_RS02650;Name=araH;gbkey=Gene;gene=araH;gene_biotype=protein_coding;locus_tag=NIV78_RS02650 NZ_CP100136.1 Protein Homology CDS 543583 544599 . + 0 ID=cds-WP_012734608.1;Parent=gene-NIV78_RS02650;Dbxref=Genbank:WP_012734608.1;Name=WP_012734608.1;Ontology_term=GO:0055085,GO:0022857,GO:0016021;gbkey=CDS;gene=araH;go_component=integral component of membrane|0016021||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025224.1;locus_tag=NIV78_RS02650;product=L-arabinose ABC transporter permease AraH;protein_id=WP_012734608.1;transl_table=11 NZ_CP100136.1 RefSeq gene 544620 545408 . + . ID=gene-NIV78_RS02655;Name=NIV78_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02655 NZ_CP100136.1 Protein Homology CDS 544620 545408 . + 0 ID=cds-WP_017923371.1;Parent=gene-NIV78_RS02655;Dbxref=Genbank:WP_017923371.1;Name=WP_017923371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423286.1;locus_tag=NIV78_RS02655;product=SDR family oxidoreductase;protein_id=WP_017923371.1;transl_table=11 NZ_CP100136.1 RefSeq gene 545473 546528 . + . ID=gene-NIV78_RS02660;Name=NIV78_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02660 NZ_CP100136.1 Protein Homology CDS 545473 546528 . + 0 ID=cds-WP_012734610.1;Parent=gene-NIV78_RS02660;Dbxref=Genbank:WP_012734610.1;Name=WP_012734610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734610.1;locus_tag=NIV78_RS02660;product=aldose 1-epimerase;protein_id=WP_012734610.1;transl_table=11 NZ_CP100136.1 RefSeq gene 546565 547392 . + . ID=gene-NIV78_RS02665;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=NIV78_RS02665 NZ_CP100136.1 Protein Homology CDS 546565 547392 . + 0 ID=cds-WP_017423288.1;Parent=gene-NIV78_RS02665;Dbxref=Genbank:WP_017423288.1;Name=WP_017423288.1;Ontology_term=GO:0009220,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009971072.1;locus_tag=NIV78_RS02665;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_017423288.1;transl_table=11 NZ_CP100136.1 RefSeq gene 547516 548016 . - . ID=gene-NIV78_RS02670;Name=NIV78_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02670 NZ_CP100136.1 Protein Homology CDS 547516 548016 . - 0 ID=cds-WP_012734612.1;Parent=gene-NIV78_RS02670;Dbxref=Genbank:WP_012734612.1;Name=WP_012734612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601091.1;locus_tag=NIV78_RS02670;product=CinA family protein;protein_id=WP_012734612.1;transl_table=11 NZ_CP100136.1 RefSeq gene 548027 548533 . - . ID=gene-NIV78_RS02675;Name=NIV78_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02675 NZ_CP100136.1 Protein Homology CDS 548027 548533 . - 0 ID=cds-WP_051071199.1;Parent=gene-NIV78_RS02675;Dbxref=Genbank:WP_051071199.1;Name=WP_051071199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734613.1;locus_tag=NIV78_RS02675;product=phosphatidylglycerophosphatase A;protein_id=WP_051071199.1;transl_table=11 NZ_CP100136.1 RefSeq gene 548646 549650 . - . ID=gene-NIV78_RS02680;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=NIV78_RS02680 NZ_CP100136.1 Protein Homology CDS 548646 549650 . - 0 ID=cds-WP_251107238.1;Parent=gene-NIV78_RS02680;Dbxref=Genbank:WP_251107238.1;Name=WP_251107238.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696614.1;locus_tag=NIV78_RS02680;product=thiamine-phosphate kinase;protein_id=WP_251107238.1;transl_table=11 NZ_CP100136.1 RefSeq gene 549816 552116 . + . ID=gene-NIV78_RS02685;Name=NIV78_RS02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02685 NZ_CP100136.1 Protein Homology CDS 549816 552116 . + 0 ID=cds-WP_012734615.1;Parent=gene-NIV78_RS02685;Dbxref=Genbank:WP_012734615.1;Name=WP_012734615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467470.1;locus_tag=NIV78_RS02685;product=NADP-dependent malic enzyme;protein_id=WP_012734615.1;transl_table=11 NZ_CP100136.1 RefSeq gene 552653 553075 . + . ID=gene-NIV78_RS02690;Name=NIV78_RS02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02690 NZ_CP100136.1 Protein Homology CDS 552653 553075 . + 0 ID=cds-WP_017923179.1;Parent=gene-NIV78_RS02690;Dbxref=Genbank:WP_017923179.1;Name=WP_017923179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194152.1;locus_tag=NIV78_RS02690;product=ribonuclease;protein_id=WP_017923179.1;transl_table=11 NZ_CP100136.1 RefSeq gene 553092 553658 . + . ID=gene-NIV78_RS02695;Name=NIV78_RS02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02695 NZ_CP100136.1 Protein Homology CDS 553092 553658 . + 0 ID=cds-WP_026051526.1;Parent=gene-NIV78_RS02695;Dbxref=Genbank:WP_026051526.1;Name=WP_026051526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889020.1;locus_tag=NIV78_RS02695;product=barstar family protein;protein_id=WP_026051526.1;transl_table=11 NZ_CP100136.1 RefSeq gene 553849 554610 . - . ID=gene-NIV78_RS02700;Name=NIV78_RS02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02700 NZ_CP100136.1 Protein Homology CDS 553849 554610 . - 0 ID=cds-WP_012734618.1;Parent=gene-NIV78_RS02700;Dbxref=Genbank:WP_012734618.1;Name=WP_012734618.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734618.1;locus_tag=NIV78_RS02700;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_012734618.1;transl_table=11 NZ_CP100136.1 RefSeq gene 554607 555023 . - . ID=gene-NIV78_RS02705;Name=NIV78_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02705 NZ_CP100136.1 Protein Homology CDS 554607 555023 . - 0 ID=cds-WP_012734619.1;Parent=gene-NIV78_RS02705;Dbxref=Genbank:WP_012734619.1;Name=WP_012734619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734619.1;locus_tag=NIV78_RS02705;product=VOC family protein;protein_id=WP_012734619.1;transl_table=11 NZ_CP100136.1 RefSeq gene 555069 555926 . - . ID=gene-NIV78_RS02710;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=NIV78_RS02710 NZ_CP100136.1 Protein Homology CDS 555069 555926 . - 0 ID=cds-WP_257757159.1;Parent=gene-NIV78_RS02710;Dbxref=Genbank:WP_257757159.1;Name=WP_257757159.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496731.1;locus_tag=NIV78_RS02710;product=polyamine aminopropyltransferase;protein_id=WP_257757159.1;transl_table=11 NZ_CP100136.1 RefSeq gene 556342 558363 . + . ID=gene-NIV78_RS02715;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=NIV78_RS02715 NZ_CP100136.1 Protein Homology CDS 556342 558363 . + 0 ID=cds-WP_017424068.1;Parent=gene-NIV78_RS02715;Dbxref=Genbank:WP_017424068.1;Name=WP_017424068.1;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424068.1;locus_tag=NIV78_RS02715;product=transketolase;protein_id=WP_017424068.1;transl_table=11 NZ_CP100136.1 RefSeq gene 558457 559467 . + . ID=gene-NIV78_RS02720;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=NIV78_RS02720 NZ_CP100136.1 Protein Homology CDS 558457 559467 . + 0 ID=cds-WP_012734622.1;Parent=gene-NIV78_RS02720;Dbxref=Genbank:WP_012734622.1;Name=WP_012734622.1;Ontology_term=GO:0006094,GO:0006096,GO:0019682;gbkey=CDS;gene=gap;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA,glyceraldehyde-3-phosphate metabolic process|0019682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883251.1;locus_tag=NIV78_RS02720;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_012734622.1;transl_table=11 NZ_CP100136.1 RefSeq gene 559645 560337 . - . ID=gene-NIV78_RS02725;Name=NIV78_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02725 NZ_CP100136.1 Protein Homology CDS 559645 560337 . - 0 ID=cds-WP_012734623.1;Parent=gene-NIV78_RS02725;Dbxref=Genbank:WP_012734623.1;Name=WP_012734623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734623.1;locus_tag=NIV78_RS02725;product=FCD domain-containing protein;protein_id=WP_012734623.1;transl_table=11 NZ_CP100136.1 RefSeq gene 560553 561875 . + . ID=gene-NIV78_RS02730;Name=NIV78_RS02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02730 NZ_CP100136.1 Protein Homology CDS 560553 561875 . + 0 ID=cds-WP_012734624.1;Parent=gene-NIV78_RS02730;Dbxref=Genbank:WP_012734624.1;Name=WP_012734624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734624.1;locus_tag=NIV78_RS02730;product=C4-dicarboxylate transporter DctA;protein_id=WP_012734624.1;transl_table=11 NZ_CP100136.1 RefSeq gene 561973 562983 . + . ID=gene-NIV78_RS02735;Name=alc;gbkey=Gene;gene=alc;gene_biotype=protein_coding;locus_tag=NIV78_RS02735 NZ_CP100136.1 Protein Homology CDS 561973 562983 . + 0 ID=cds-WP_012734625.1;Parent=gene-NIV78_RS02735;Dbxref=Genbank:WP_012734625.1;Name=WP_012734625.1;Ontology_term=GO:0000256,GO:0004037;gbkey=CDS;gene=alc;go_function=allantoicase activity|0004037||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476931.1;locus_tag=NIV78_RS02735;product=allantoicase;protein_id=WP_012734625.1;transl_table=11 NZ_CP100136.1 RefSeq gene 563000 563533 . + . ID=gene-NIV78_RS02740;Name=NIV78_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02740 NZ_CP100136.1 Protein Homology CDS 563000 563533 . + 0 ID=cds-WP_012734626.1;Parent=gene-NIV78_RS02740;Dbxref=Genbank:WP_012734626.1;Name=WP_012734626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091325.1;locus_tag=NIV78_RS02740;product=ureidoglycolate lyase;protein_id=WP_012734626.1;transl_table=11 NZ_CP100136.1 RefSeq gene 563750 564178 . - . ID=gene-NIV78_RS02745;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=NIV78_RS02745 NZ_CP100136.1 Protein Homology CDS 563750 564178 . - 0 ID=cds-WP_012734627.1;Parent=gene-NIV78_RS02745;Dbxref=Genbank:WP_012734627.1;Name=WP_012734627.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006051897.1;locus_tag=NIV78_RS02745;product=ferric iron uptake transcriptional regulator;protein_id=WP_012734627.1;transl_table=11 NZ_CP100136.1 RefSeq gene 564332 565234 . + . ID=gene-NIV78_RS02750;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=NIV78_RS02750 NZ_CP100136.1 Protein Homology CDS 564332 565234 . + 0 ID=cds-WP_169512293.1;Parent=gene-NIV78_RS02750;Dbxref=Genbank:WP_169512293.1;Name=WP_169512293.1;Ontology_term=GO:0019867;gbkey=CDS;gene=bamE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734628.1;locus_tag=NIV78_RS02750;product=outer membrane protein assembly factor BamE;protein_id=WP_169512293.1;transl_table=11 NZ_CP100136.1 RefSeq gene 565325 566122 . + . ID=gene-NIV78_RS02755;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=NIV78_RS02755 NZ_CP100136.1 Protein Homology CDS 565325 566122 . + 0 ID=cds-WP_012734629.1;Parent=gene-NIV78_RS02755;Dbxref=Genbank:WP_012734629.1;Name=WP_012734629.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762730.1;locus_tag=NIV78_RS02755;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_012734629.1;transl_table=11 NZ_CP100136.1 RefSeq gene 566153 566842 . + . ID=gene-NIV78_RS02760;Name=NIV78_RS02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02760 NZ_CP100136.1 Protein Homology CDS 566153 566842 . + 0 ID=cds-WP_257757161.1;Parent=gene-NIV78_RS02760;Dbxref=Genbank:WP_257757161.1;Name=WP_257757161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734630.1;locus_tag=NIV78_RS02760;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_257757161.1;transl_table=11 NZ_CP100136.1 RefSeq gene 566852 567319 . + . ID=gene-NIV78_RS02765;Name=NIV78_RS02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02765 NZ_CP100136.1 Protein Homology CDS 566852 567319 . + 0 ID=cds-WP_012734631.1;Parent=gene-NIV78_RS02765;Dbxref=Genbank:WP_012734631.1;Name=WP_012734631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522077.1;locus_tag=NIV78_RS02765;product=biopolymer transporter ExbD;protein_id=WP_012734631.1;transl_table=11 NZ_CP100136.1 RefSeq gene 567570 570164 . + . ID=gene-NIV78_RS02770;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=NIV78_RS02770 NZ_CP100136.1 Protein Homology CDS 567570 570164 . + 0 ID=cds-WP_100555673.1;Parent=gene-NIV78_RS02770;Dbxref=Genbank:WP_100555673.1;Name=WP_100555673.1;Ontology_term=GO:0006429,GO:0004823,GO:0005737;gbkey=CDS;gene=leuS;go_component=cytoplasm|0005737||IEA;go_function=leucine-tRNA ligase activity|0004823||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363082.1;locus_tag=NIV78_RS02770;product=leucine--tRNA ligase;protein_id=WP_100555673.1;transl_table=11 NZ_CP100136.1 RefSeq gene 570193 570744 . + . ID=gene-NIV78_RS02775;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=NIV78_RS02775 NZ_CP100136.1 Protein Homology CDS 570193 570744 . + 0 ID=cds-WP_012734633.1;Parent=gene-NIV78_RS02775;Dbxref=Genbank:WP_012734633.1;Name=WP_012734633.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004541250.1;locus_tag=NIV78_RS02775;product=LPS assembly lipoprotein LptE;protein_id=WP_012734633.1;transl_table=11 NZ_CP100136.1 RefSeq gene 570795 571934 . + . ID=gene-NIV78_RS02780;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=NIV78_RS02780 NZ_CP100136.1 Protein Homology CDS 570795 571934 . + 0 ID=cds-WP_100555675.1;Parent=gene-NIV78_RS02780;Dbxref=Genbank:WP_100555675.1;Name=WP_100555675.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=holA;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734634.1;locus_tag=NIV78_RS02780;product=DNA polymerase III subunit delta;protein_id=WP_100555675.1;transl_table=11 NZ_CP100136.1 RefSeq gene 572057 573328 . + . ID=gene-NIV78_RS02785;Name=NIV78_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02785 NZ_CP100136.1 Protein Homology CDS 572057 573328 . + 0 ID=cds-WP_012734635.1;Parent=gene-NIV78_RS02785;Dbxref=Genbank:WP_012734635.1;Name=WP_012734635.1;Ontology_term=GO:0006561,GO:0004350,GO:0016620;gbkey=CDS;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413382.1;locus_tag=NIV78_RS02785;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_012734635.1;transl_table=11 NZ_CP100136.1 RefSeq gene 573402 573824 . + . ID=gene-NIV78_RS02790;Name=NIV78_RS02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02790 NZ_CP100136.1 Protein Homology CDS 573402 573824 . + 0 ID=cds-WP_012734636.1;Parent=gene-NIV78_RS02790;Dbxref=Genbank:WP_012734636.1;Name=WP_012734636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483416.1;locus_tag=NIV78_RS02790;product=CopD family protein;protein_id=WP_012734636.1;transl_table=11 NZ_CP100136.1 RefSeq gene 573921 574817 . - . ID=gene-NIV78_RS02795;Name=NIV78_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02795 NZ_CP100136.1 Protein Homology CDS 573921 574817 . - 0 ID=cds-WP_012734637.1;Parent=gene-NIV78_RS02795;Dbxref=Genbank:WP_012734637.1;Name=WP_012734637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734637.1;locus_tag=NIV78_RS02795;product=MurR/RpiR family transcriptional regulator;protein_id=WP_012734637.1;transl_table=11 NZ_CP100136.1 RefSeq gene 575107 576972 . + . ID=gene-NIV78_RS02800;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=NIV78_RS02800 NZ_CP100136.1 Protein Homology CDS 575107 576972 . + 0 ID=cds-WP_017923556.1;Parent=gene-NIV78_RS02800;Dbxref=Genbank:WP_017923556.1;Name=WP_017923556.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734638.1;locus_tag=NIV78_RS02800;product=phosphogluconate dehydratase;protein_id=WP_017923556.1;transl_table=11 NZ_CP100136.1 RefSeq gene 577064 577690 . + . ID=gene-NIV78_RS02805;Name=eda;gbkey=Gene;gene=eda;gene_biotype=protein_coding;locus_tag=NIV78_RS02805 NZ_CP100136.1 Protein Homology CDS 577064 577690 . + 0 ID=cds-WP_017423162.1;Parent=gene-NIV78_RS02805;Dbxref=Genbank:WP_017423162.1;Name=WP_017423162.1;Ontology_term=GO:0009084,GO:0009255,GO:0008675,GO:0008700;gbkey=CDS;gene=eda;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA,4-hydroxy-2-oxoglutarate aldolase activity|0008700||IEA;go_process=glutamine family amino acid biosynthetic process|0009084||IEA,Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009955692.1;locus_tag=NIV78_RS02805;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_017423162.1;transl_table=11 NZ_CP100136.1 RefSeq gene 578281 579645 . + . ID=gene-NIV78_RS02810;Name=NIV78_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02810 NZ_CP100136.1 Protein Homology CDS 578281 579645 . + 0 ID=cds-WP_012734640.1;Parent=gene-NIV78_RS02810;Dbxref=Genbank:WP_012734640.1;Name=WP_012734640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600646.1;locus_tag=NIV78_RS02810;product=gluconate:H+ symporter;protein_id=WP_012734640.1;transl_table=11 NZ_CP100136.1 RefSeq gene 579663 580166 . + . ID=gene-NIV78_RS02815;Name=NIV78_RS02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02815 NZ_CP100136.1 Protein Homology CDS 579663 580166 . + 0 ID=cds-WP_012734641.1;Parent=gene-NIV78_RS02815;Dbxref=Genbank:WP_012734641.1;Name=WP_012734641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734641.1;locus_tag=NIV78_RS02815;product=gluconokinase;protein_id=WP_012734641.1;transl_table=11 NZ_CP100136.1 RefSeq gene 580310 581698 . - . ID=gene-NIV78_RS02820;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=NIV78_RS02820 NZ_CP100136.1 Protein Homology CDS 580310 581698 . - 0 ID=cds-WP_257757164.1;Parent=gene-NIV78_RS02820;Dbxref=Genbank:WP_257757164.1;Name=WP_257757164.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009908754.1;locus_tag=NIV78_RS02820;product=adenylosuccinate lyase;protein_id=WP_257757164.1;transl_table=11 NZ_CP100136.1 RefSeq gene 581877 582833 . + . ID=gene-NIV78_RS02825;Name=NIV78_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02825 NZ_CP100136.1 Protein Homology CDS 581877 582833 . + 0 ID=cds-WP_017423160.1;Parent=gene-NIV78_RS02825;Dbxref=Genbank:WP_017423160.1;Name=WP_017423160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423160.1;locus_tag=NIV78_RS02825;product=LysR substrate-binding domain-containing protein;protein_id=WP_017423160.1;transl_table=11 NZ_CP100136.1 RefSeq gene 583006 584313 . + . ID=gene-NIV78_RS02830;Name=NIV78_RS02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02830 NZ_CP100136.1 Protein Homology CDS 583006 584313 . + 0 ID=cds-WP_012734644.1;Parent=gene-NIV78_RS02830;Dbxref=Genbank:WP_012734644.1;Name=WP_012734644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194166.1;locus_tag=NIV78_RS02830;product=Glu/Leu/Phe/Val dehydrogenase;protein_id=WP_012734644.1;transl_table=11 NZ_CP100136.1 RefSeq gene 584558 585451 . + . ID=gene-NIV78_RS02835;Name=NIV78_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02835 NZ_CP100136.1 Protein Homology CDS 584558 585451 . + 0 ID=cds-WP_012734645.1;Parent=gene-NIV78_RS02835;Dbxref=Genbank:WP_012734645.1;Name=WP_012734645.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889082.1;locus_tag=NIV78_RS02835;product=glutamate/aspartate ABC transporter substrate-binding protein;protein_id=WP_012734645.1;transl_table=11 NZ_CP100136.1 RefSeq gene 585538 586278 . + . ID=gene-NIV78_RS02840;Name=NIV78_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02840 NZ_CP100136.1 Protein Homology CDS 585538 586278 . + 0 ID=cds-WP_012734646.1;Parent=gene-NIV78_RS02840;Dbxref=Genbank:WP_012734646.1;Name=WP_012734646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601464.1;locus_tag=NIV78_RS02840;product=amino acid ABC transporter permease;protein_id=WP_012734646.1;transl_table=11 NZ_CP100136.1 RefSeq gene 586278 586955 . + . ID=gene-NIV78_RS02845;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=NIV78_RS02845 NZ_CP100136.1 Protein Homology CDS 586278 586955 . + 0 ID=cds-WP_012734647.1;Parent=gene-NIV78_RS02845;Dbxref=Genbank:WP_012734647.1;Name=WP_012734647.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025271.1;locus_tag=NIV78_RS02845;product=glutamate/aspartate ABC transporter permease GltK;protein_id=WP_012734647.1;transl_table=11 NZ_CP100136.1 RefSeq gene 586952 587677 . + . ID=gene-NIV78_RS02850;Name=NIV78_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02850 NZ_CP100136.1 Protein Homology CDS 586952 587677 . + 0 ID=cds-WP_012734648.1;Parent=gene-NIV78_RS02850;Dbxref=Genbank:WP_012734648.1;Name=WP_012734648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=NIV78_RS02850;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_012734648.1;transl_table=11 NZ_CP100136.1 RefSeq gene 587775 588719 . - . ID=gene-NIV78_RS02855;Name=NIV78_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02855 NZ_CP100136.1 Protein Homology CDS 587775 588719 . - 0 ID=cds-WP_012734649.1;Parent=gene-NIV78_RS02855;Dbxref=Genbank:WP_012734649.1;Name=WP_012734649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734649.1;locus_tag=NIV78_RS02855;product=class II glutamine amidotransferase;protein_id=WP_012734649.1;transl_table=11 NZ_CP100136.1 RefSeq gene 588929 589999 . + . ID=gene-NIV78_RS02860;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=NIV78_RS02860 NZ_CP100136.1 Protein Homology CDS 588929 589999 . + 0 ID=cds-WP_012734650.1;Parent=gene-NIV78_RS02860;Dbxref=Genbank:WP_012734650.1;Name=WP_012734650.1;Ontology_term=GO:0009220,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013589587.1;locus_tag=NIV78_RS02860;product=dihydroorotase;protein_id=WP_012734650.1;transl_table=11 NZ_CP100136.1 RefSeq gene 589996 590829 . + . ID=gene-NIV78_RS02865;Name=NIV78_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02865 NZ_CP100136.1 Protein Homology CDS 589996 590829 . + 0 ID=cds-WP_100555676.1;Parent=gene-NIV78_RS02865;Dbxref=Genbank:WP_100555676.1;Name=WP_100555676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011325891.1;locus_tag=NIV78_RS02865;product=DUF3025 domain-containing protein;protein_id=WP_100555676.1;transl_table=11 NZ_CP100136.1 RefSeq gene 590902 591317 . + . ID=gene-NIV78_RS02870;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=NIV78_RS02870 NZ_CP100136.1 cmsearch RNase_P_RNA 590902 591317 . + . ID=rna-NIV78_RS02870;Parent=gene-NIV78_RS02870;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS02870;product=RNase P RNA component class A NZ_CP100136.1 cmsearch exon 590902 591317 . + . ID=exon-NIV78_RS02870-1;Parent=rna-NIV78_RS02870;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS02870;product=RNase P RNA component class A NZ_CP100136.1 RefSeq gene 591404 591826 . - . ID=gene-NIV78_RS02875;Name=NIV78_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02875 NZ_CP100136.1 Protein Homology CDS 591404 591826 . - 0 ID=cds-WP_017424855.1;Parent=gene-NIV78_RS02875;Dbxref=Genbank:WP_017424855.1;Name=WP_017424855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004549988.1;locus_tag=NIV78_RS02875;product=OsmC family protein;protein_id=WP_017424855.1;transl_table=11 NZ_CP100136.1 RefSeq gene 592503 592931 . + . ID=gene-NIV78_RS02880;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=NIV78_RS02880 NZ_CP100136.1 Protein Homology CDS 592503 592931 . + 0 ID=cds-WP_012734653.1;Parent=gene-NIV78_RS02880;Dbxref=Genbank:WP_012734653.1;Name=WP_012734653.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplM;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008919631.1;locus_tag=NIV78_RS02880;product=50S ribosomal protein L13;protein_id=WP_012734653.1;transl_table=11 NZ_CP100136.1 RefSeq gene 592945 593337 . + . ID=gene-NIV78_RS02885;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=NIV78_RS02885 NZ_CP100136.1 Protein Homology CDS 592945 593337 . + 0 ID=cds-WP_012734654.1;Parent=gene-NIV78_RS02885;Dbxref=Genbank:WP_012734654.1;Name=WP_012734654.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019447061.1;locus_tag=NIV78_RS02885;product=30S ribosomal protein S9;protein_id=WP_012734654.1;transl_table=11 NZ_CP100136.1 RefSeq gene 593540 593914 . + . ID=gene-NIV78_RS02890;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=NIV78_RS02890 NZ_CP100136.1 Protein Homology CDS 593540 593914 . + 0 ID=cds-WP_012734655.1;Parent=gene-NIV78_RS02890;Dbxref=Genbank:WP_012734655.1;Name=WP_012734655.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007587442.1;locus_tag=NIV78_RS02890;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_012734655.1;transl_table=11 NZ_CP100136.1 RefSeq gene 594016 595119 . - . ID=gene-NIV78_RS02895;Name=NIV78_RS02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02895 NZ_CP100136.1 Protein Homology CDS 594016 595119 . - 0 ID=cds-WP_045678951.1;Parent=gene-NIV78_RS02895;Dbxref=Genbank:WP_045678951.1;Name=WP_045678951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883285.1;locus_tag=NIV78_RS02895;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_045678951.1;transl_table=11 NZ_CP100136.1 RefSeq gene 595321 596562 . + . ID=gene-NIV78_RS02900;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=NIV78_RS02900 NZ_CP100136.1 Protein Homology CDS 595321 596562 . + 0 ID=cds-WP_012734657.1;Parent=gene-NIV78_RS02900;Dbxref=Genbank:WP_012734657.1;Name=WP_012734657.1;Ontology_term=GO:0006437,GO:0004831,GO:0005737;gbkey=CDS;gene=tyrS;go_component=cytoplasm|0005737||IEA;go_function=tyrosine-tRNA ligase activity|0004831||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350958.1;locus_tag=NIV78_RS02900;product=tyrosine--tRNA ligase;protein_id=WP_012734657.1;transl_table=11 NZ_CP100136.1 RefSeq gene 596559 597017 . + . ID=gene-NIV78_RS02905;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=NIV78_RS02905 NZ_CP100136.1 Protein Homology CDS 596559 597017 . + 0 ID=cds-WP_012734658.1;Parent=gene-NIV78_RS02905;Dbxref=Genbank:WP_012734658.1;Name=WP_012734658.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009931857.1;locus_tag=NIV78_RS02905;product=D-aminoacyl-tRNA deacylase;protein_id=WP_012734658.1;transl_table=11 NZ_CP100136.1 RefSeq gene 597107 597769 . + . ID=gene-NIV78_RS02910;Name=NIV78_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02910 NZ_CP100136.1 Protein Homology CDS 597107 597769 . + 0 ID=cds-WP_012734659.1;Parent=gene-NIV78_RS02910;Dbxref=Genbank:WP_012734659.1;Name=WP_012734659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009903982.1;locus_tag=NIV78_RS02910;product=histidine phosphatase family protein;protein_id=WP_012734659.1;transl_table=11 NZ_CP100136.1 RefSeq gene 597833 598927 . - . ID=gene-NIV78_RS02915;Name=NIV78_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02915 NZ_CP100136.1 Protein Homology CDS 597833 598927 . - 0 ID=cds-WP_251118752.1;Parent=gene-NIV78_RS02915;Dbxref=Genbank:WP_251118752.1;Name=WP_251118752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734660.1;locus_tag=NIV78_RS02915;product=ParB/Srx family N-terminal domain-containing protein;protein_id=WP_251118752.1;transl_table=11 NZ_CP100136.1 RefSeq gene 599115 600191 . - . ID=gene-NIV78_RS02920;Name=NIV78_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02920 NZ_CP100136.1 Protein Homology CDS 599115 600191 . - 0 ID=cds-WP_035979397.1;Parent=gene-NIV78_RS02920;Dbxref=Genbank:WP_035979397.1;Name=WP_035979397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734661.1;locus_tag=NIV78_RS02920;product=oxygenase MpaB family protein;protein_id=WP_035979397.1;transl_table=11 NZ_CP100136.1 RefSeq gene 600211 601278 . - . ID=gene-NIV78_RS02925;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=NIV78_RS02925 NZ_CP100136.1 Protein Homology CDS 600211 601278 . - 0 ID=cds-WP_012734662.1;Parent=gene-NIV78_RS02925;Dbxref=Genbank:WP_012734662.1;Name=WP_012734662.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734662.1;locus_tag=NIV78_RS02925;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_012734662.1;transl_table=11 NZ_CP100136.1 RefSeq gene 601379 601960 . - . ID=gene-NIV78_RS02930;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=NIV78_RS02930 NZ_CP100136.1 Protein Homology CDS 601379 601960 . - 0 ID=cds-WP_012734663.1;Parent=gene-NIV78_RS02930;Dbxref=Genbank:WP_012734663.1;Name=WP_012734663.1;Ontology_term=GO:0006310,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=four-way junction helicase activity|0009378||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734663.1;locus_tag=NIV78_RS02930;product=Holliday junction branch migration protein RuvA;protein_id=WP_012734663.1;transl_table=11 NZ_CP100136.1 RefSeq gene 602044 602586 . - . ID=gene-NIV78_RS02935;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=NIV78_RS02935 NZ_CP100136.1 Protein Homology CDS 602044 602586 . - 0 ID=cds-WP_012734664.1;Parent=gene-NIV78_RS02935;Dbxref=Genbank:WP_012734664.1;Name=WP_012734664.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction endodeoxyribonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012401929.1;locus_tag=NIV78_RS02935;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_012734664.1;transl_table=11 NZ_CP100136.1 RefSeq gene 602999 604564 . - . ID=gene-NIV78_RS02940;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=NIV78_RS02940 NZ_CP100136.1 Protein Homology CDS 602999 604564 . - 0 ID=cds-WP_012734665.1;Parent=gene-NIV78_RS02940;Dbxref=Genbank:WP_012734665.1;Name=WP_012734665.1;Ontology_term=GO:0006164,GO:0006189,GO:0003824,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=catalytic activity|0003824||IEA,IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,'de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011869829.1;locus_tag=NIV78_RS02940;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_012734665.1;transl_table=11 NZ_CP100136.1 RefSeq gene 604610 604843 . - . ID=gene-NIV78_RS02945;Name=NIV78_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02945 NZ_CP100136.1 Protein Homology CDS 604610 604843 . - 0 ID=cds-WP_012734666.1;Parent=gene-NIV78_RS02945;Dbxref=Genbank:WP_012734666.1;Name=WP_012734666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013436270.1;locus_tag=NIV78_RS02945;product=Fis family transcriptional regulator;protein_id=WP_012734666.1;transl_table=11 NZ_CP100136.1 RefSeq gene 604848 605891 . - . ID=gene-NIV78_RS02950;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=NIV78_RS02950 NZ_CP100136.1 Protein Homology CDS 604848 605891 . - 0 ID=cds-WP_012734667.1;Parent=gene-NIV78_RS02950;Dbxref=Genbank:WP_012734667.1;Name=WP_012734667.1;Ontology_term=GO:0008033,GO:0003824,GO:0016491,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=catalytic activity|0003824||IEA,oxidoreductase activity|0016491||IEA,tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696669.1;locus_tag=NIV78_RS02950;product=tRNA dihydrouridine synthase DusB;protein_id=WP_012734667.1;transl_table=11 NZ_CP100136.1 RefSeq gene 606070 607275 . - . ID=gene-NIV78_RS02955;Name=NIV78_RS02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02955 NZ_CP100136.1 Protein Homology CDS 606070 607275 . - 0 ID=cds-WP_251107241.1;Parent=gene-NIV78_RS02955;Dbxref=Genbank:WP_251107241.1;Name=WP_251107241.1;Ontology_term=GO:0006744,GO:0016705,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413044.1;locus_tag=NIV78_RS02955;product=UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase;protein_id=WP_251107241.1;transl_table=11 NZ_CP100136.1 RefSeq gene 607328 608755 . - . ID=gene-NIV78_RS02960;Name=NIV78_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02960 NZ_CP100136.1 Protein Homology CDS 607328 608755 . - 0 ID=cds-WP_251107242.1;Parent=gene-NIV78_RS02960;Dbxref=Genbank:WP_251107242.1;Name=WP_251107242.1;Ontology_term=GO:0030145,GO:0070006;gbkey=CDS;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020069291.1;locus_tag=NIV78_RS02960;product=aminopeptidase P N-terminal domain-containing protein;protein_id=WP_251107242.1;transl_table=11 NZ_CP100136.1 RefSeq gene 608973 609587 . + . ID=gene-NIV78_RS02965;Name=NIV78_RS02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02965 NZ_CP100136.1 Protein Homology CDS 608973 609587 . + 0 ID=cds-WP_012734670.1;Parent=gene-NIV78_RS02965;Dbxref=Genbank:WP_012734670.1;Name=WP_012734670.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734670.1;locus_tag=NIV78_RS02965;product=glutathione S-transferase N-terminal domain-containing protein;protein_id=WP_012734670.1;transl_table=11 NZ_CP100136.1 RefSeq gene 609686 611305 . - . ID=gene-NIV78_RS02970;Name=NIV78_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02970 NZ_CP100136.1 Protein Homology CDS 609686 611305 . - 0 ID=cds-WP_017923267.1;Parent=gene-NIV78_RS02970;Dbxref=Genbank:WP_017923267.1;Name=WP_017923267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327911.1;locus_tag=NIV78_RS02970;product=FMN-binding glutamate synthase family protein;protein_id=WP_017923267.1;transl_table=11 NZ_CP100136.1 RefSeq gene 611503 612684 . - . ID=gene-NIV78_RS02975;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=NIV78_RS02975 NZ_CP100136.1 Protein Homology CDS 611503 612684 . - 0 ID=cds-WP_012734672.1;Parent=gene-NIV78_RS02975;Dbxref=Genbank:WP_012734672.1;Name=WP_012734672.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734672.1;locus_tag=NIV78_RS02975;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_012734672.1;transl_table=11 NZ_CP100136.1 RefSeq gene 612681 613190 . - . ID=gene-NIV78_RS02980;Name=NIV78_RS02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02980 NZ_CP100136.1 Protein Homology CDS 612681 613190 . - 0 ID=cds-WP_012734673.1;Parent=gene-NIV78_RS02980;Dbxref=Genbank:WP_012734673.1;Name=WP_012734673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194031.1;locus_tag=NIV78_RS02980;product=NUDIX hydrolase;protein_id=WP_012734673.1;transl_table=11 NZ_CP100136.1 RefSeq gene 613471 614616 . + . ID=gene-NIV78_RS02985;Name=NIV78_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02985 NZ_CP100136.1 Protein Homology CDS 613471 614616 . + 0 ID=cds-WP_257757166.1;Parent=gene-NIV78_RS02985;Dbxref=Genbank:WP_257757166.1;Name=WP_257757166.1;Ontology_term=GO:1902600,GO:0008746;gbkey=CDS;go_function=NAD(P)+ transhydrogenase activity|0008746||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889159.1;locus_tag=NIV78_RS02985;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_257757166.1;transl_table=11 NZ_CP100136.1 RefSeq gene 614629 614958 . + . ID=gene-NIV78_RS02990;Name=NIV78_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02990 NZ_CP100136.1 Protein Homology CDS 614629 614958 . + 0 ID=cds-WP_012734675.1;Parent=gene-NIV78_RS02990;Dbxref=Genbank:WP_012734675.1;Name=WP_012734675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194392.1;locus_tag=NIV78_RS02990;product=NAD(P) transhydrogenase subunit alpha;protein_id=WP_012734675.1;transl_table=11 NZ_CP100136.1 RefSeq gene 614955 616409 . + . ID=gene-NIV78_RS02995;Name=NIV78_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS02995 NZ_CP100136.1 Protein Homology CDS 614955 616409 . + 0 ID=cds-WP_017424581.1;Parent=gene-NIV78_RS02995;Dbxref=Genbank:WP_017424581.1;Name=WP_017424581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350976.1;locus_tag=NIV78_RS02995;product=NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta;protein_id=WP_017424581.1;transl_table=11 NZ_CP100136.1 RefSeq gene 616425 617036 . - . ID=gene-NIV78_RS03000;Name=NIV78_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03000 NZ_CP100136.1 Protein Homology CDS 616425 617036 . - 0 ID=cds-WP_251107561.1;Parent=gene-NIV78_RS03000;Dbxref=Genbank:WP_251107561.1;Name=WP_251107561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734677.1;locus_tag=NIV78_RS03000;product=WYL domain-containing protein;protein_id=WP_251107561.1;transl_table=11 NZ_CP100136.1 RefSeq gene 616928 617374 . - . ID=gene-NIV78_RS03005;Name=NIV78_RS03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03005 NZ_CP100136.1 Protein Homology CDS 616928 617374 . - 0 ID=cds-WP_232734506.1;Parent=gene-NIV78_RS03005;Dbxref=Genbank:WP_232734506.1;Name=WP_232734506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363116.1;locus_tag=NIV78_RS03005;product=VOC family protein;protein_id=WP_232734506.1;transl_table=11 NZ_CP100136.1 RefSeq gene 617656 618963 . - . ID=gene-NIV78_RS03010;Name=NIV78_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03010 NZ_CP100136.1 Protein Homology CDS 617656 618963 . - 0 ID=cds-WP_017924730.1;Parent=gene-NIV78_RS03010;Dbxref=Genbank:WP_017924730.1;Name=WP_017924730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722460.1;locus_tag=NIV78_RS03010;product=class I SAM-dependent RNA methyltransferase;protein_id=WP_017924730.1;transl_table=11 NZ_CP100136.1 RefSeq gene 619091 621211 . - . ID=gene-NIV78_RS03015;Name=NIV78_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03015 NZ_CP100136.1 Protein Homology CDS 619091 621211 . - 0 ID=cds-WP_100555679.1;Parent=gene-NIV78_RS03015;Dbxref=Genbank:WP_100555679.1;Name=WP_100555679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734680.1;locus_tag=NIV78_RS03015;product=site-specific recombinase;protein_id=WP_100555679.1;transl_table=11 NZ_CP100136.1 RefSeq gene 621410 622135 . - . ID=gene-NIV78_RS03020;Name=NIV78_RS03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03020 NZ_CP100136.1 Protein Homology CDS 621410 622135 . - 0 ID=cds-WP_012734681.1;Parent=gene-NIV78_RS03020;Dbxref=Genbank:WP_012734681.1;Name=WP_012734681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696683.1;locus_tag=NIV78_RS03020;product=PqiC family protein;protein_id=WP_012734681.1;transl_table=11 NZ_CP100136.1 RefSeq gene 622132 623772 . - . ID=gene-NIV78_RS03025;Name=NIV78_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03025 NZ_CP100136.1 Protein Homology CDS 622132 623772 . - 0 ID=cds-WP_017924226.1;Parent=gene-NIV78_RS03025;Dbxref=Genbank:WP_017924226.1;Name=WP_017924226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009974101.1;locus_tag=NIV78_RS03025;product=MlaD family protein;protein_id=WP_017924226.1;transl_table=11 NZ_CP100136.1 RefSeq gene 623765 624406 . - . ID=gene-NIV78_RS03030;Name=NIV78_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03030 NZ_CP100136.1 Protein Homology CDS 623765 624406 . - 0 ID=cds-WP_012734683.1;Parent=gene-NIV78_RS03030;Dbxref=Genbank:WP_012734683.1;Name=WP_012734683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734683.1;locus_tag=NIV78_RS03030;product=paraquat-inducible protein A;protein_id=WP_012734683.1;transl_table=11 NZ_CP100136.1 RefSeq gene 624403 625098 . - . ID=gene-NIV78_RS03035;Name=NIV78_RS03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03035 NZ_CP100136.1 Protein Homology CDS 624403 625098 . - 0 ID=cds-WP_012734684.1;Parent=gene-NIV78_RS03035;Dbxref=Genbank:WP_012734684.1;Name=WP_012734684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696686.1;locus_tag=NIV78_RS03035;product=paraquat-inducible protein A;protein_id=WP_012734684.1;transl_table=11 NZ_CP100136.1 RefSeq gene 625373 625933 . + . ID=gene-NIV78_RS03040;Name=NIV78_RS03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03040 NZ_CP100136.1 Protein Homology CDS 625373 625933 . + 0 ID=cds-WP_017424798.1;Parent=gene-NIV78_RS03040;Dbxref=Genbank:WP_017424798.1;Name=WP_017424798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363122.1;locus_tag=NIV78_RS03040;product=cytochrome b;protein_id=WP_017424798.1;transl_table=11 NZ_CP100136.1 RefSeq gene 625947 626507 . + . ID=gene-NIV78_RS03045;Name=NIV78_RS03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03045 NZ_CP100136.1 Protein Homology CDS 625947 626507 . + 0 ID=cds-WP_017424797.1;Parent=gene-NIV78_RS03045;Dbxref=Genbank:WP_017424797.1;Name=WP_017424797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106308.1;locus_tag=NIV78_RS03045;product=YceI family protein;protein_id=WP_017424797.1;transl_table=11 NZ_CP100136.1 RefSeq gene 626579 627157 . + . ID=gene-NIV78_RS03050;Name=NIV78_RS03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03050 NZ_CP100136.1 Protein Homology CDS 626579 627157 . + 0 ID=cds-WP_012734687.1;Parent=gene-NIV78_RS03050;Dbxref=Genbank:WP_012734687.1;Name=WP_012734687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025318.1;locus_tag=NIV78_RS03050;product=YceI family protein;protein_id=WP_012734687.1;transl_table=11 NZ_CP100136.1 RefSeq gene 627369 628319 . - . ID=gene-NIV78_RS03055;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=NIV78_RS03055 NZ_CP100136.1 Protein Homology CDS 627369 628319 . - 0 ID=cds-WP_012734688.1;Parent=gene-NIV78_RS03055;Dbxref=Genbank:WP_012734688.1;Name=WP_012734688.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011852175.1;locus_tag=NIV78_RS03055;product=protein translocase subunit SecF;protein_id=WP_012734688.1;transl_table=11 NZ_CP100136.1 RefSeq gene 628336 630369 . - . ID=gene-NIV78_RS03060;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=NIV78_RS03060 NZ_CP100136.1 Protein Homology CDS 628336 630369 . - 0 ID=cds-WP_100555680.1;Parent=gene-NIV78_RS03060;Dbxref=Genbank:WP_100555680.1;Name=WP_100555680.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363128.1;locus_tag=NIV78_RS03060;product=protein translocase subunit SecD;protein_id=WP_100555680.1;transl_table=11 NZ_CP100136.1 RefSeq gene 630478 630804 . - . ID=gene-NIV78_RS03065;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=NIV78_RS03065 NZ_CP100136.1 Protein Homology CDS 630478 630804 . - 0 ID=cds-WP_012734690.1;Parent=gene-NIV78_RS03065;Dbxref=Genbank:WP_012734690.1;Name=WP_012734690.1;Ontology_term=GO:0009306,GO:0015450,GO:0005887;gbkey=CDS;gene=yajC;go_component=integral component of plasma membrane|0005887||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014190436.1;locus_tag=NIV78_RS03065;product=preprotein translocase subunit YajC;protein_id=WP_012734690.1;transl_table=11 NZ_CP100136.1 RefSeq gene 631083 632303 . - . ID=gene-NIV78_RS03070;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=NIV78_RS03070 NZ_CP100136.1 Protein Homology CDS 631083 632303 . - 0 ID=cds-WP_012734691.1;Parent=gene-NIV78_RS03070;Dbxref=Genbank:WP_012734691.1;Name=WP_012734691.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=queuine tRNA-ribosyltransferase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734691.1;locus_tag=NIV78_RS03070;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_012734691.1;transl_table=11 NZ_CP100136.1 RefSeq gene 632419 633471 . - . ID=gene-NIV78_RS03075;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=NIV78_RS03075 NZ_CP100136.1 Protein Homology CDS 632419 633471 . - 0 ID=cds-WP_017923696.1;Parent=gene-NIV78_RS03075;Dbxref=Genbank:WP_017923696.1;Name=WP_017923696.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;gene=queA;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734692.1;locus_tag=NIV78_RS03075;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_017923696.1;transl_table=11 NZ_CP100136.1 RefSeq gene 633649 636192 . + . ID=gene-NIV78_RS03080;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=NIV78_RS03080 NZ_CP100136.1 Protein Homology CDS 633649 636192 . + 0 ID=cds-WP_251107244.1;Parent=gene-NIV78_RS03080;Dbxref=Genbank:WP_251107244.1;Name=WP_251107244.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678;gbkey=CDS;gene=recG;go_function=DNA helicase activity|0003678||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014917883.1;locus_tag=NIV78_RS03080;product=ATP-dependent DNA helicase RecG;protein_id=WP_251107244.1;transl_table=11 NZ_CP100136.1 RefSeq gene 636339 637298 . + . ID=gene-NIV78_RS03085;Name=NIV78_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03085 NZ_CP100136.1 Protein Homology CDS 636339 637298 . + 0 ID=cds-WP_012734694.1;Parent=gene-NIV78_RS03085;Dbxref=Genbank:WP_012734694.1;Name=WP_012734694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333233.1;locus_tag=NIV78_RS03085;product=hydrogen peroxide-inducible genes activator;protein_id=WP_012734694.1;transl_table=11 NZ_CP100136.1 RefSeq gene 637780 637956 . + . ID=gene-NIV78_RS03090;Name=NIV78_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03090 NZ_CP100136.1 Protein Homology CDS 637780 637956 . + 0 ID=cds-WP_017923724.1;Parent=gene-NIV78_RS03090;Dbxref=Genbank:WP_017923724.1;Name=WP_017923724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425149.1;locus_tag=NIV78_RS03090;product=hypothetical protein;protein_id=WP_017923724.1;transl_table=11 NZ_CP100136.1 RefSeq gene 638121 638609 . + . ID=gene-NIV78_RS03095;Name=NIV78_RS03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03095 NZ_CP100136.1 Protein Homology CDS 638121 638609 . + 0 ID=cds-WP_012734695.1;Parent=gene-NIV78_RS03095;Dbxref=Genbank:WP_012734695.1;Name=WP_012734695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734695.1;locus_tag=NIV78_RS03095;product=DNA starvation/stationary phase protection protein;protein_id=WP_012734695.1;transl_table=11 NZ_CP100136.1 RefSeq gene 638793 639656 . + . ID=gene-NIV78_RS03100;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=NIV78_RS03100 NZ_CP100136.1 Protein Homology CDS 638793 639656 . + 0 ID=cds-WP_012734696.1;Parent=gene-NIV78_RS03100;Dbxref=Genbank:WP_012734696.1;Name=WP_012734696.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate octaprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009967063.1;locus_tag=NIV78_RS03100;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_012734696.1;transl_table=11 NZ_CP100136.1 RefSeq gene 639861 640676 . - . ID=gene-NIV78_RS03105;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=NIV78_RS03105 NZ_CP100136.1 Protein Homology CDS 639861 640676 . - 0 ID=cds-WP_153478033.1;Parent=gene-NIV78_RS03105;Dbxref=Genbank:WP_153478033.1;Name=WP_153478033.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004550016.1;locus_tag=NIV78_RS03105;product=pyrroline-5-carboxylate reductase;protein_id=WP_153478033.1;transl_table=11 NZ_CP100136.1 RefSeq gene 640702 641412 . - . ID=gene-NIV78_RS03110;Name=NIV78_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03110 NZ_CP100136.1 Protein Homology CDS 640702 641412 . - 0 ID=cds-WP_012734698.1;Parent=gene-NIV78_RS03110;Dbxref=Genbank:WP_012734698.1;Name=WP_012734698.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696703.1;locus_tag=NIV78_RS03110;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_012734698.1;transl_table=11 NZ_CP100136.1 RefSeq gene 641533 642759 . - . ID=gene-NIV78_RS03115;Name=glcF;gbkey=Gene;gene=glcF;gene_biotype=protein_coding;locus_tag=NIV78_RS03115 NZ_CP100136.1 Protein Homology CDS 641533 642759 . - 0 ID=cds-WP_012734699.1;Parent=gene-NIV78_RS03115;Dbxref=Genbank:WP_012734699.1;Name=WP_012734699.1;Ontology_term=GO:0051536;gbkey=CDS;gene=glcF;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734699.1;locus_tag=NIV78_RS03115;product=glycolate oxidase subunit GlcF;protein_id=WP_012734699.1;transl_table=11 NZ_CP100136.1 RefSeq gene 642764 643852 . - . ID=gene-NIV78_RS03120;Name=glcE;gbkey=Gene;gene=glcE;gene_biotype=protein_coding;locus_tag=NIV78_RS03120 NZ_CP100136.1 Protein Homology CDS 642764 643852 . - 0 ID=cds-WP_012734700.1;Parent=gene-NIV78_RS03120;Dbxref=Genbank:WP_012734700.1;Name=WP_012734700.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;gene=glcE;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333241.1;locus_tag=NIV78_RS03120;product=glycolate oxidase subunit GlcE;protein_id=WP_012734700.1;transl_table=11 NZ_CP100136.1 RefSeq gene 643952 645469 . - . ID=gene-NIV78_RS03125;Name=NIV78_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03125 NZ_CP100136.1 Protein Homology CDS 643952 645469 . - 0 ID=cds-WP_257757171.1;Parent=gene-NIV78_RS03125;Dbxref=Genbank:WP_257757171.1;Name=WP_257757171.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734701.1;locus_tag=NIV78_RS03125;product=FAD-binding protein;protein_id=WP_257757171.1;transl_table=11 NZ_CP100136.1 RefSeq gene 645466 646881 . - . ID=gene-NIV78_RS03130;Name=NIV78_RS03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03130 NZ_CP100136.1 Protein Homology CDS 645466 646881 . - 0 ID=cds-WP_257757173.1;Parent=gene-NIV78_RS03130;Dbxref=Genbank:WP_257757173.1;Name=WP_257757173.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194328.1;locus_tag=NIV78_RS03130;product=FAD-binding protein;protein_id=WP_257757173.1;transl_table=11 NZ_CP100136.1 RefSeq gene 647286 647837 . + . ID=gene-NIV78_RS03135;Name=NIV78_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03135 NZ_CP100136.1 Protein Homology CDS 647286 647837 . + 0 ID=cds-WP_017925003.1;Parent=gene-NIV78_RS03135;Dbxref=Genbank:WP_017925003.1;Name=WP_017925003.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;go_function=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696708.1;locus_tag=NIV78_RS03135;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_017925003.1;transl_table=11 NZ_CP100136.1 RefSeq gene 647993 649201 . + . ID=gene-NIV78_RS03140;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=NIV78_RS03140 NZ_CP100136.1 Protein Homology CDS 647993 649201 . + 0 ID=cds-WP_017923455.1;Parent=gene-NIV78_RS03140;Dbxref=Genbank:WP_017923455.1;Name=WP_017923455.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734704.1;locus_tag=NIV78_RS03140;product=NO-inducible flavohemoprotein;protein_id=WP_017923455.1;transl_table=11 NZ_CP100136.1 RefSeq gene 649279 650352 . - . ID=gene-NIV78_RS03145;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=NIV78_RS03145 NZ_CP100136.1 Protein Homology CDS 649279 650352 . - 0 ID=cds-WP_012734705.1;Parent=gene-NIV78_RS03145;Dbxref=Genbank:WP_012734705.1;Name=WP_012734705.1;Ontology_term=GO:0009073,GO:0003849;gbkey=CDS;gene=aroG;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013587169.1;locus_tag=NIV78_RS03145;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_012734705.1;transl_table=11 NZ_CP100136.1 RefSeq gene 650772 652238 . - . ID=gene-NIV78_RS03150;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=NIV78_RS03150 NZ_CP100136.1 Protein Homology CDS 650772 652238 . - 0 ID=cds-WP_012734706.1;Parent=gene-NIV78_RS03150;Dbxref=Genbank:WP_012734706.1;Name=WP_012734706.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012431786.1;locus_tag=NIV78_RS03150;product=metalloprotease TldD;protein_id=WP_012734706.1;transl_table=11 NZ_CP100136.1 RefSeq gene 652331 653170 . - . ID=gene-NIV78_RS03155;Name=NIV78_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03155 NZ_CP100136.1 Protein Homology CDS 652331 653170 . - 0 ID=cds-WP_017923456.1;Parent=gene-NIV78_RS03155;Dbxref=Genbank:WP_017923456.1;Name=WP_017923456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734707.1;locus_tag=NIV78_RS03155;product=carbon-nitrogen hydrolase family protein;protein_id=WP_017923456.1;transl_table=11 NZ_CP100136.1 RefSeq gene 653211 657428 . - . ID=gene-NIV78_RS03160;Name=NIV78_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03160 NZ_CP100136.1 Protein Homology CDS 653211 657428 . - 0 ID=cds-WP_251118754.1;Parent=gene-NIV78_RS03160;Dbxref=Genbank:WP_251118754.1;Name=WP_251118754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424060.1;locus_tag=NIV78_RS03160;product=DUF3971 domain-containing protein;protein_id=WP_251118754.1;transl_table=11 NZ_CP100136.1 RefSeq gene 657685 660531 . + . ID=gene-NIV78_RS03165;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=NIV78_RS03165 NZ_CP100136.1 Protein Homology CDS 657685 660531 . + 0 ID=cds-WP_251107246.1;Parent=gene-NIV78_RS03165;Dbxref=Genbank:WP_251107246.1;Name=WP_251107246.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734709.1;locus_tag=NIV78_RS03165;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_251107246.1;transl_table=11 NZ_CP100136.1 RefSeq gene 660782 662431 . - . ID=gene-NIV78_RS03170;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=NIV78_RS03170 NZ_CP100136.1 Protein Homology CDS 660782 662431 . - 0 ID=cds-WP_017923088.1;Parent=gene-NIV78_RS03170;Dbxref=Genbank:WP_017923088.1;Name=WP_017923088.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889240.1;locus_tag=NIV78_RS03170;product=DNA repair protein RecN;protein_id=WP_017923088.1;transl_table=11 NZ_CP100136.1 RefSeq gene 662451 663353 . - . ID=gene-NIV78_RS03175;Name=NIV78_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03175 NZ_CP100136.1 Protein Homology CDS 662451 663353 . - 0 ID=cds-WP_012734711.1;Parent=gene-NIV78_RS03175;Dbxref=Genbank:WP_012734711.1;Name=WP_012734711.1;Ontology_term=GO:0019674,GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;go_process=NAD metabolic process|0019674||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734711.1;locus_tag=NIV78_RS03175;product=NAD kinase;protein_id=WP_012734711.1;transl_table=11 NZ_CP100136.1 RefSeq gene 663292 664497 . + . ID=gene-NIV78_RS03180;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=NIV78_RS03180 NZ_CP100136.1 Protein Homology CDS 663292 664497 . + 0 ID=cds-WP_167343614.1;Parent=gene-NIV78_RS03180;Dbxref=Genbank:WP_167343614.1;Name=WP_167343614.1;Ontology_term=GO:0009408,GO:0005737;gbkey=CDS;gene=hrcA;go_component=cytoplasm|0005737||IEA;go_process=response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196496.1;locus_tag=NIV78_RS03180;product=heat-inducible transcriptional repressor HrcA;protein_id=WP_167343614.1;transl_table=11 NZ_CP100136.1 RefSeq gene 664633 665700 . + . ID=gene-NIV78_RS03185;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=NIV78_RS03185 NZ_CP100136.1 Protein Homology CDS 664633 665700 . + 0 ID=cds-WP_012734713.1;Parent=gene-NIV78_RS03185;Dbxref=Genbank:WP_012734713.1;Name=WP_012734713.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734713.1;locus_tag=NIV78_RS03185;product=ferrochelatase;protein_id=WP_012734713.1;transl_table=11 NZ_CP100136.1 RefSeq gene 665745 666152 . + . ID=gene-NIV78_RS03190;Name=NIV78_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03190 NZ_CP100136.1 Protein Homology CDS 665745 666152 . + 0 ID=cds-WP_012734714.1;Parent=gene-NIV78_RS03190;Dbxref=Genbank:WP_012734714.1;Name=WP_012734714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401607.1;locus_tag=NIV78_RS03190;product=RNA-binding S4 domain-containing protein;protein_id=WP_012734714.1;transl_table=11 NZ_CP100136.1 RefSeq gene 666124 666285 . - . ID=gene-NIV78_RS03195;Name=NIV78_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03195 NZ_CP100136.1 Protein Homology CDS 666124 666285 . - 0 ID=cds-WP_012734715.1;Parent=gene-NIV78_RS03195;Dbxref=Genbank:WP_012734715.1;Name=WP_012734715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194079.1;locus_tag=NIV78_RS03195;product=hypothetical protein;protein_id=WP_012734715.1;transl_table=11 NZ_CP100136.1 RefSeq gene 666733 667296 . + . ID=gene-NIV78_RS03200;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=NIV78_RS03200 NZ_CP100136.1 Protein Homology CDS 666733 667296 . + 0 ID=cds-WP_012734716.1;Parent=gene-NIV78_RS03200;Dbxref=Genbank:WP_012734716.1;Name=WP_012734716.1;Ontology_term=GO:0006457,GO:0000774,GO:0051087;gbkey=CDS;gene=grpE;go_function=adenyl-nucleotide exchange factor activity|0000774||IEA,chaperone binding|0051087||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194243.1;locus_tag=NIV78_RS03200;product=nucleotide exchange factor GrpE;protein_id=WP_012734716.1;transl_table=11 NZ_CP100136.1 RefSeq gene 667626 669587 . + . ID=gene-NIV78_RS03205;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=NIV78_RS03205 NZ_CP100136.1 Protein Homology CDS 667626 669587 . + 0 ID=cds-WP_012734717.1;Parent=gene-NIV78_RS03205;Dbxref=Genbank:WP_012734717.1;Name=WP_012734717.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013088502.1;locus_tag=NIV78_RS03205;product=molecular chaperone DnaK;protein_id=WP_012734717.1;transl_table=11 NZ_CP100136.1 RefSeq gene 669809 670945 . + . ID=gene-NIV78_RS03210;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=NIV78_RS03210 NZ_CP100136.1 Protein Homology CDS 669809 670945 . + 0 ID=cds-WP_012734718.1;Parent=gene-NIV78_RS03210;Dbxref=Genbank:WP_012734718.1;Name=WP_012734718.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417099.1;locus_tag=NIV78_RS03210;product=molecular chaperone DnaJ;protein_id=WP_012734718.1;transl_table=11 NZ_CP100136.1 RefSeq gene 670962 672812 . + . ID=gene-NIV78_RS03215;Name=NIV78_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03215 NZ_CP100136.1 Protein Homology CDS 670962 672812 . + 0 ID=cds-WP_124836504.1;Parent=gene-NIV78_RS03215;Dbxref=Genbank:WP_124836504.1;Name=WP_124836504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734719.1;locus_tag=NIV78_RS03215;product=bifunctional anthranilate synthase component I family protein/class IV aminotransferase;protein_id=WP_124836504.1;transl_table=11 NZ_CP100136.1 RefSeq gene 672841 673656 . - . ID=gene-NIV78_RS03220;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=NIV78_RS03220 NZ_CP100136.1 Protein Homology CDS 672841 673656 . - 0 ID=cds-WP_012734720.1;Parent=gene-NIV78_RS03220;Dbxref=Genbank:WP_012734720.1;Name=WP_012734720.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351027.1;locus_tag=NIV78_RS03220;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_012734720.1;transl_table=11 NZ_CP100136.1 RefSeq gene 673703 674386 . - . ID=gene-NIV78_RS03225;Name=NIV78_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03225 NZ_CP100136.1 Protein Homology CDS 673703 674386 . - 0 ID=cds-WP_017423080.1;Parent=gene-NIV78_RS03225;Dbxref=Genbank:WP_017423080.1;Name=WP_017423080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532195.1;locus_tag=NIV78_RS03225;product=deoxynucleoside kinase;protein_id=WP_017423080.1;transl_table=11 NZ_CP100136.1 RefSeq gene 674383 674916 . - . ID=gene-NIV78_RS03230;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=NIV78_RS03230 NZ_CP100136.1 Protein Homology CDS 674383 674916 . - 0 ID=cds-WP_012734722.1;Parent=gene-NIV78_RS03230;Dbxref=Genbank:WP_012734722.1;Name=WP_012734722.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025371.1;locus_tag=NIV78_RS03230;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_012734722.1;transl_table=11 NZ_CP100136.1 RefSeq gene 674946 676523 . - . ID=gene-NIV78_RS03235;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=NIV78_RS03235 NZ_CP100136.1 Protein Homology CDS 674946 676523 . - 0 ID=cds-WP_012734723.1;Parent=gene-NIV78_RS03235;Dbxref=Genbank:WP_012734723.1;Name=WP_012734723.1;Ontology_term=GO:0006378,GO:0003723,GO:0004652;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,polynucleotide adenylyltransferase activity|0004652||IEA;go_process=mRNA polyadenylation|0006378||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734723.1;locus_tag=NIV78_RS03235;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_012734723.1;transl_table=11 NZ_CP100136.1 RefSeq gene 676520 677206 . - . ID=gene-NIV78_RS03240;Name=NIV78_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03240 NZ_CP100136.1 Protein Homology CDS 676520 677206 . - 0 ID=cds-WP_017423078.1;Parent=gene-NIV78_RS03240;Dbxref=Genbank:WP_017423078.1;Name=WP_017423078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106190.1;locus_tag=NIV78_RS03240;product=HAD-IB family hydrolase;protein_id=WP_017423078.1;transl_table=11 NZ_CP100136.1 RefSeq gene 677228 677953 . - . ID=gene-NIV78_RS03245;Name=hda;gbkey=Gene;gene=hda;gene_biotype=protein_coding;locus_tag=NIV78_RS03245 NZ_CP100136.1 Protein Homology CDS 677228 677953 . - 0 ID=cds-WP_017924621.1;Parent=gene-NIV78_RS03245;Dbxref=Genbank:WP_017924621.1;Name=WP_017924621.1;Ontology_term=GO:0032297,GO:0016818;gbkey=CDS;gene=hda;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106188.1;locus_tag=NIV78_RS03245;product=DnaA regulatory inactivator Hda;protein_id=WP_017924621.1;transl_table=11 NZ_CP100136.1 RefSeq gene 678231 679286 . + . ID=gene-NIV78_RS03250;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=NIV78_RS03250 NZ_CP100136.1 Protein Homology CDS 678231 679286 . + 0 ID=cds-WP_012734726.1;Parent=gene-NIV78_RS03250;Dbxref=Genbank:WP_012734726.1;Name=WP_012734726.1;Ontology_term=GO:0006189,GO:0009152,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010116949.1;locus_tag=NIV78_RS03250;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_012734726.1;transl_table=11 NZ_CP100136.1 RefSeq gene 679384 680352 . - . ID=gene-NIV78_RS03255;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=NIV78_RS03255 NZ_CP100136.1 Protein Homology CDS 679384 680352 . - 0 ID=cds-WP_012734727.1;Parent=gene-NIV78_RS03255;Dbxref=Genbank:WP_012734727.1;Name=WP_012734727.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734727.1;locus_tag=NIV78_RS03255;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_012734727.1;transl_table=11 NZ_CP100136.1 RefSeq gene 680349 682472 . - . ID=gene-NIV78_RS03260;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=NIV78_RS03260 NZ_CP100136.1 Protein Homology CDS 680349 682472 . - 0 ID=cds-WP_251107247.1;Parent=gene-NIV78_RS03260;Dbxref=Genbank:WP_251107247.1;Name=WP_251107247.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194266.1;locus_tag=NIV78_RS03260;product=DNA mismatch repair endonuclease MutL;protein_id=WP_251107247.1;transl_table=11 NZ_CP100136.1 RefSeq gene 682691 683386 . + . ID=gene-NIV78_RS03265;Name=NIV78_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03265 NZ_CP100136.1 Protein Homology CDS 682691 683386 . + 0 ID=cds-WP_017423203.1;Parent=gene-NIV78_RS03265;Dbxref=Genbank:WP_017423203.1;Name=WP_017423203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734729.1;locus_tag=NIV78_RS03265;product=VTT domain-containing protein;protein_id=WP_017423203.1;transl_table=11 NZ_CP100136.1 RefSeq gene 683417 684232 . - . ID=gene-NIV78_RS03270;Name=NIV78_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03270 NZ_CP100136.1 Protein Homology CDS 683417 684232 . - 0 ID=cds-WP_012734730.1;Parent=gene-NIV78_RS03270;Dbxref=Genbank:WP_012734730.1;Name=WP_012734730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734730.1;locus_tag=NIV78_RS03270;product=mechanosensitive ion channel family protein;protein_id=WP_012734730.1;transl_table=11 NZ_CP100136.1 RefSeq gene 684376 685227 . - . ID=gene-NIV78_RS03275;Name=NIV78_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03275 NZ_CP100136.1 Protein Homology CDS 684376 685227 . - 0 ID=cds-WP_017922531.1;Parent=gene-NIV78_RS03275;Dbxref=Genbank:WP_017922531.1;Name=WP_017922531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423202.1;locus_tag=NIV78_RS03275;product=class II glutamine amidotransferase;protein_id=WP_017922531.1;transl_table=11 NZ_CP100136.1 RefSeq gene 685409 686836 . - . ID=gene-NIV78_RS03280;Name=NIV78_RS03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03280 NZ_CP100136.1 Protein Homology CDS 685409 686836 . - 0 ID=cds-WP_012734732.1;Parent=gene-NIV78_RS03280;Dbxref=Genbank:WP_012734732.1;Name=WP_012734732.1;Ontology_term=GO:0009103,GO:0004476,GO:0008905;gbkey=CDS;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,mannose-phosphate guanylyltransferase activity|0008905||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734732.1;locus_tag=NIV78_RS03280;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_012734732.1;transl_table=11 NZ_CP100136.1 RefSeq gene 686922 688973 . - . ID=gene-NIV78_RS03285;Name=NIV78_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03285 NZ_CP100136.1 Protein Homology CDS 686922 688973 . - 0 ID=cds-WP_257757191.1;Parent=gene-NIV78_RS03285;Dbxref=Genbank:WP_257757191.1;Name=WP_257757191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734733.1;locus_tag=NIV78_RS03285;product=capsular biosynthesis protein;protein_id=WP_257757191.1;transl_table=11 NZ_CP100136.1 RefSeq gene 688974 690131 . - . ID=gene-NIV78_RS03290;Name=NIV78_RS03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03290 NZ_CP100136.1 Protein Homology CDS 688974 690131 . - 0 ID=cds-WP_012734734.1;Parent=gene-NIV78_RS03290;Dbxref=Genbank:WP_012734734.1;Name=WP_012734734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004544163.1;locus_tag=NIV78_RS03290;product=glycosyltransferase family 4 protein;protein_id=WP_012734734.1;transl_table=11 NZ_CP100136.1 RefSeq gene 690295 691482 . + . ID=gene-NIV78_RS03295;Name=NIV78_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03295 NZ_CP100136.1 Protein Homology CDS 690295 691482 . + 0 ID=cds-WP_173941157.1;Parent=gene-NIV78_RS03295;Dbxref=Genbank:WP_173941157.1;Name=WP_173941157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484977.1;locus_tag=NIV78_RS03295;product=polysaccharide export protein;protein_id=WP_173941157.1;transl_table=11 NZ_CP100136.1 RefSeq gene 691720 694398 . + . ID=gene-NIV78_RS03300;Name=NIV78_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03300 NZ_CP100136.1 Protein Homology CDS 691720 694398 . + 0 ID=cds-WP_251107248.1;Parent=gene-NIV78_RS03300;Dbxref=Genbank:WP_251107248.1;Name=WP_251107248.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423200.1;locus_tag=NIV78_RS03300;product=FkbM family methyltransferase;protein_id=WP_251107248.1;transl_table=11 NZ_CP100136.1 RefSeq gene 694471 697818 . + . ID=gene-NIV78_RS03305;Name=NIV78_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03305 NZ_CP100136.1 Protein Homology CDS 694471 697818 . + 0 ID=cds-WP_017423199.1;Parent=gene-NIV78_RS03305;Dbxref=Genbank:WP_017423199.1;Name=WP_017423199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423199.1;locus_tag=NIV78_RS03305;product=glycosyltransferase;protein_id=WP_017423199.1;transl_table=11 NZ_CP100136.1 RefSeq gene 697842 698876 . + . ID=gene-NIV78_RS03310;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=NIV78_RS03310 NZ_CP100136.1 Protein Homology CDS 697842 698876 . + 0 ID=cds-WP_017922529.1;Parent=gene-NIV78_RS03310;Dbxref=Genbank:WP_017922529.1;Name=WP_017922529.1;Ontology_term=GO:0000271,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423198.1;locus_tag=NIV78_RS03310;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_017922529.1;transl_table=11 NZ_CP100136.1 RefSeq gene 698880 699773 . + . ID=gene-NIV78_RS03315;Name=NIV78_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03315 NZ_CP100136.1 Protein Homology CDS 698880 699773 . + 0 ID=cds-WP_017423197.1;Parent=gene-NIV78_RS03315;Dbxref=Genbank:WP_017423197.1;Name=WP_017423197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734739.1;locus_tag=NIV78_RS03315;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_017423197.1;transl_table=11 NZ_CP100136.1 RefSeq gene 699770 700900 . + . ID=gene-NIV78_RS03320;Name=NIV78_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03320 NZ_CP100136.1 Protein Homology CDS 699770 700900 . + 0 ID=cds-WP_017922528.1;Parent=gene-NIV78_RS03320;Dbxref=Genbank:WP_017922528.1;Name=WP_017922528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734740.1;locus_tag=NIV78_RS03320;product=glycosyltransferase family 4 protein;protein_id=WP_017922528.1;transl_table=11 NZ_CP100136.1 RefSeq gene 700895 702160 . - . ID=gene-NIV78_RS03325;Name=NIV78_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03325 NZ_CP100136.1 Protein Homology CDS 700895 702160 . - 0 ID=cds-WP_017922527.1;Parent=gene-NIV78_RS03325;Dbxref=Genbank:WP_017922527.1;Name=WP_017922527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734741.1;locus_tag=NIV78_RS03325;product=glycosyltransferase family 4 protein;protein_id=WP_017922527.1;transl_table=11 NZ_CP100136.1 RefSeq gene 702176 702826 . - . ID=gene-NIV78_RS03330;Name=NIV78_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03330 NZ_CP100136.1 Protein Homology CDS 702176 702826 . - 0 ID=cds-WP_012734742.1;Parent=gene-NIV78_RS03330;Dbxref=Genbank:WP_012734742.1;Name=WP_012734742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734742.1;locus_tag=NIV78_RS03330;product=ABC transporter ATP-binding protein;protein_id=WP_012734742.1;transl_table=11 NZ_CP100136.1 RefSeq gene 702823 703617 . - . ID=gene-NIV78_RS03335;Name=NIV78_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03335 NZ_CP100136.1 Protein Homology CDS 702823 703617 . - 0 ID=cds-WP_026051347.1;Parent=gene-NIV78_RS03335;Dbxref=Genbank:WP_026051347.1;Name=WP_026051347.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010111002.1;locus_tag=NIV78_RS03335;product=ABC transporter permease;protein_id=WP_026051347.1;transl_table=11 NZ_CP100136.1 RefSeq gene 703627 704778 . - . ID=gene-NIV78_RS03340;Name=NIV78_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03340 NZ_CP100136.1 Protein Homology CDS 703627 704778 . - 0 ID=cds-WP_012734744.1;Parent=gene-NIV78_RS03340;Dbxref=Genbank:WP_012734744.1;Name=WP_012734744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734744.1;locus_tag=NIV78_RS03340;product=capsule polysaccharide export protein;protein_id=WP_012734744.1;transl_table=11 NZ_CP100136.1 RefSeq gene 705223 706428 . + . ID=gene-NIV78_RS03345;Name=NIV78_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03345 NZ_CP100136.1 Protein Homology CDS 705223 706428 . + 0 ID=cds-WP_026051346.1;Parent=gene-NIV78_RS03345;Dbxref=Genbank:WP_026051346.1;Name=WP_026051346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484925.1;locus_tag=NIV78_RS03345;product=capsular biosynthesis protein;protein_id=WP_026051346.1;transl_table=11 NZ_CP100136.1 RefSeq gene 706421 707212 . + . ID=gene-NIV78_RS03350;Name=NIV78_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03350 NZ_CP100136.1 Protein Homology CDS 706421 707212 . + 0 ID=cds-WP_153478013.1;Parent=gene-NIV78_RS03350;Dbxref=Genbank:WP_153478013.1;Name=WP_153478013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734746.1;locus_tag=NIV78_RS03350;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_153478013.1;transl_table=11 NZ_CP100136.1 RefSeq gene 707230 708735 . + . ID=gene-NIV78_RS03355;Name=NIV78_RS03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03355 NZ_CP100136.1 Protein Homology CDS 707230 708735 . + 0 ID=cds-WP_017924001.1;Parent=gene-NIV78_RS03355;Dbxref=Genbank:WP_017924001.1;Name=WP_017924001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734747.1;locus_tag=NIV78_RS03355;product=LTA synthase family protein;protein_id=WP_017924001.1;transl_table=11 NZ_CP100136.1 RefSeq gene 708738 716336 . + . ID=gene-NIV78_RS03360;Name=NIV78_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03360 NZ_CP100136.1 Protein Homology CDS 708738 716336 . + 0 ID=cds-WP_251107249.1;Parent=gene-NIV78_RS03360;Dbxref=Genbank:WP_251107249.1;Name=WP_251107249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734748.1;locus_tag=NIV78_RS03360;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_251107249.1;transl_table=11 NZ_CP100136.1 RefSeq gene 716333 717256 . + . ID=gene-NIV78_RS03365;Name=NIV78_RS03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03365 NZ_CP100136.1 Protein Homology CDS 716333 717256 . + 0 ID=cds-WP_017424857.1;Parent=gene-NIV78_RS03365;Dbxref=Genbank:WP_017424857.1;Name=WP_017424857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424857.1;locus_tag=NIV78_RS03365;product=UDP-3-O-acyl N-acetylglycosamine deacetylase;protein_id=WP_017424857.1;transl_table=11 NZ_CP100136.1 RefSeq gene 717294 718613 . + . ID=gene-NIV78_RS03370;Name=NIV78_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03370 NZ_CP100136.1 Protein Homology CDS 717294 718613 . + 0 ID=cds-WP_017923054.1;Parent=gene-NIV78_RS03370;Dbxref=Genbank:WP_017923054.1;Name=WP_017923054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194209.1;locus_tag=NIV78_RS03370;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_017923054.1;transl_table=11 NZ_CP100136.1 RefSeq gene 718622 719260 . + . ID=gene-NIV78_RS03375;Name=NIV78_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03375 NZ_CP100136.1 Protein Homology CDS 718622 719260 . + 0 ID=cds-WP_017923055.1;Parent=gene-NIV78_RS03375;Dbxref=Genbank:WP_017923055.1;Name=WP_017923055.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696759.1;locus_tag=NIV78_RS03375;product=GNAT family N-acetyltransferase;protein_id=WP_017923055.1;transl_table=11 NZ_CP100136.1 RefSeq gene 719605 719680 . - . ID=gene-NIV78_RS03380;Name=NIV78_RS03380;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS03380 NZ_CP100136.1 tRNAscan-SE tRNA 719605 719680 . - . ID=rna-NIV78_RS03380;Parent=gene-NIV78_RS03380;anticodon=(pos:complement(719645..719647));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS03380;product=tRNA-Lys NZ_CP100136.1 tRNAscan-SE exon 719605 719680 . - . ID=exon-NIV78_RS03380-1;Parent=rna-NIV78_RS03380;anticodon=(pos:complement(719645..719647));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS03380;product=tRNA-Lys NZ_CP100136.1 RefSeq gene 719752 720501 . - . ID=gene-NIV78_RS03385;Name=ybgF;gbkey=Gene;gene=ybgF;gene_biotype=protein_coding;locus_tag=NIV78_RS03385 NZ_CP100136.1 Protein Homology CDS 719752 720501 . - 0 ID=cds-WP_012734752.1;Parent=gene-NIV78_RS03385;Dbxref=Genbank:WP_012734752.1;Name=WP_012734752.1;Ontology_term=GO:0005515;gbkey=CDS;gene=ybgF;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025426.1;locus_tag=NIV78_RS03385;product=tol-pal system protein YbgF;protein_id=WP_012734752.1;transl_table=11 NZ_CP100136.1 RefSeq gene 720521 721033 . - . ID=gene-NIV78_RS03390;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=NIV78_RS03390 NZ_CP100136.1 Protein Homology CDS 720521 721033 . - 0 ID=cds-WP_012734753.1;Parent=gene-NIV78_RS03390;Dbxref=Genbank:WP_012734753.1;Name=WP_012734753.1;Ontology_term=GO:0009279;gbkey=CDS;gene=pal;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186227.1;locus_tag=NIV78_RS03390;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_012734753.1;transl_table=11 NZ_CP100136.1 RefSeq gene 721051 722352 . - . ID=gene-NIV78_RS03395;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=NIV78_RS03395 NZ_CP100136.1 Protein Homology CDS 721051 722352 . - 0 ID=cds-WP_026051366.1;Parent=gene-NIV78_RS03395;Dbxref=Genbank:WP_026051366.1;Name=WP_026051366.1;Ontology_term=GO:0006810,GO:0005215,GO:0030288;gbkey=CDS;gene=tolB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351073.1;locus_tag=NIV78_RS03395;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_026051366.1;transl_table=11 NZ_CP100136.1 RefSeq gene 722450 723493 . - . ID=gene-NIV78_RS03400;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=NIV78_RS03400 NZ_CP100136.1 Protein Homology CDS 722450 723493 . - 0 ID=cds-WP_257757196.1;Parent=gene-NIV78_RS03400;Dbxref=Genbank:WP_257757196.1;Name=WP_257757196.1;Ontology_term=GO:0006810,GO:0005215,GO:0031237;gbkey=CDS;gene=tolA;go_component=intrinsic component of periplasmic side of plasma membrane|0031237||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406396.1;locus_tag=NIV78_RS03400;product=cell envelope integrity protein TolA;protein_id=WP_257757196.1;transl_table=11 NZ_CP100136.1 RefSeq gene 723490 723939 . - . ID=gene-NIV78_RS03405;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=NIV78_RS03405 NZ_CP100136.1 Protein Homology CDS 723490 723939 . - 0 ID=cds-WP_012734756.1;Parent=gene-NIV78_RS03405;Dbxref=Genbank:WP_012734756.1;Name=WP_012734756.1;Ontology_term=GO:0061024,GO:1902600,GO:0015078,GO:0031237;gbkey=CDS;gene=tolR;go_component=intrinsic component of periplasmic side of plasma membrane|0031237||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=membrane organization|0061024||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194863.1;locus_tag=NIV78_RS03405;product=protein TolR;protein_id=WP_012734756.1;transl_table=11 NZ_CP100136.1 RefSeq gene 723950 724627 . - . ID=gene-NIV78_RS03410;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=NIV78_RS03410 NZ_CP100136.1 Protein Homology CDS 723950 724627 . - 0 ID=cds-WP_012734757.1;Parent=gene-NIV78_RS03410;Dbxref=Genbank:WP_012734757.1;Name=WP_012734757.1;Ontology_term=GO:1902600,GO:0015078,GO:0005887;gbkey=CDS;gene=tolQ;go_component=integral component of plasma membrane|0005887||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091489.1;locus_tag=NIV78_RS03410;product=protein TolQ;protein_id=WP_012734757.1;transl_table=11 NZ_CP100136.1 RefSeq gene 724816 725286 . - . ID=gene-NIV78_RS03415;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=NIV78_RS03415 NZ_CP100136.1 Protein Homology CDS 724816 725286 . - 0 ID=cds-WP_012734758.1;Parent=gene-NIV78_RS03415;Dbxref=Genbank:WP_012734758.1;Name=WP_012734758.1;Ontology_term=GO:0005515,GO:0047617,GO:0005737;gbkey=CDS;gene=ybgC;go_component=cytoplasm|0005737||IEA;go_function=protein binding|0005515||IEA,acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423283.1;locus_tag=NIV78_RS03415;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_012734758.1;transl_table=11 NZ_CP100136.1 RefSeq gene 725405 726151 . - . ID=gene-NIV78_RS03420;Name=NIV78_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03420 NZ_CP100136.1 Protein Homology CDS 725405 726151 . - 0 ID=cds-WP_017923057.1;Parent=gene-NIV78_RS03420;Dbxref=Genbank:WP_017923057.1;Name=WP_017923057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696778.1;locus_tag=NIV78_RS03420;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_017923057.1;transl_table=11 NZ_CP100136.1 cmsearch riboswitch 726412 726512 . + . ID=id-NZ_CP100136.1:726412..726512;Dbxref=RFAM:RF01750;Note=ZMP/ZTP riboswitches appear to regulate genes involved in one-carbon metabolism;bound_moiety=5-aminoimidazole-4-carboxamide ribonucleotide (ZMP)/ 5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-triphosphate (ZMT);gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP100136.1 RefSeq gene 726653 727900 . + . ID=gene-NIV78_RS03425;Name=NIV78_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03425 NZ_CP100136.1 Protein Homology CDS 726653 727900 . + 0 ID=cds-WP_017432707.1;Parent=gene-NIV78_RS03425;Dbxref=Genbank:WP_017432707.1;Name=WP_017432707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018442488.1;locus_tag=NIV78_RS03425;product=serine hydroxymethyltransferase;protein_id=WP_017432707.1;transl_table=11 NZ_CP100136.1 RefSeq gene 727907 728386 . + . ID=gene-NIV78_RS03430;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=NIV78_RS03430 NZ_CP100136.1 Protein Homology CDS 727907 728386 . + 0 ID=cds-WP_012734762.1;Parent=gene-NIV78_RS03430;Dbxref=Genbank:WP_012734762.1;Name=WP_012734762.1;Ontology_term=GO:0006355,GO:0140110;gbkey=CDS;gene=nrdR;go_function=transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476792.1;locus_tag=NIV78_RS03430;product=transcriptional regulator NrdR;protein_id=WP_012734762.1;transl_table=11 NZ_CP100136.1 RefSeq gene 728544 729113 . + . ID=gene-NIV78_RS03435;Name=NIV78_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03435 NZ_CP100136.1 Protein Homology CDS 728544 729113 . + 0 ID=cds-WP_017924224.1;Parent=gene-NIV78_RS03435;Dbxref=Genbank:WP_017924224.1;Name=WP_017924224.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734763.1;locus_tag=NIV78_RS03435;product=GspH/FimT family pseudopilin;protein_id=WP_017924224.1;transl_table=11 NZ_CP100136.1 RefSeq gene 729131 729514 . + . ID=gene-NIV78_RS03440;Name=NIV78_RS03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03440 NZ_CP100136.1 GeneMarkS-2+ CDS 729131 729514 . + 0 ID=cds-WP_012734764.1;Parent=gene-NIV78_RS03440;Dbxref=Genbank:WP_012734764.1;Name=WP_012734764.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS03440;product=hypothetical protein;protein_id=WP_012734764.1;transl_table=11 NZ_CP100136.1 RefSeq gene 729511 730317 . + . ID=gene-NIV78_RS03445;Name=NIV78_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03445 NZ_CP100136.1 Protein Homology CDS 729511 730317 . + 0 ID=cds-WP_012734765.1;Parent=gene-NIV78_RS03445;Dbxref=Genbank:WP_012734765.1;Name=WP_012734765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186509.1;locus_tag=NIV78_RS03445;product=type IV pillus assembly protein;protein_id=WP_012734765.1;transl_table=11 NZ_CP100136.1 RefSeq gene 730482 731018 . + . ID=gene-NIV78_RS03450;Name=NIV78_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03450 NZ_CP100136.1 Protein Homology CDS 730482 731018 . + 0 ID=cds-WP_251107251.1;Parent=gene-NIV78_RS03450;Dbxref=Genbank:WP_251107251.1;Name=WP_251107251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601932.1;locus_tag=NIV78_RS03450;product=hypothetical protein;protein_id=WP_251107251.1;transl_table=11 NZ_CP100136.1 RefSeq gene 731034 731513 . + . ID=gene-NIV78_RS03455;Name=NIV78_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03455 NZ_CP100136.1 Protein Homology CDS 731034 731513 . + 0 ID=cds-WP_124836741.1;Parent=gene-NIV78_RS03455;Dbxref=Genbank:WP_124836741.1;Name=WP_124836741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734767.1;locus_tag=NIV78_RS03455;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_124836741.1;transl_table=11 NZ_CP100136.1 RefSeq gene 731645 732142 . - . ID=gene-NIV78_RS03460;Name=NIV78_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03460 NZ_CP100136.1 Protein Homology CDS 731645 732142 . - 0 ID=cds-WP_012734768.1;Parent=gene-NIV78_RS03460;Dbxref=Genbank:WP_012734768.1;Name=WP_012734768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734768.1;locus_tag=NIV78_RS03460;product=DUF3318 domain-containing protein;protein_id=WP_012734768.1;transl_table=11 NZ_CP100136.1 RefSeq gene 732164 732553 . - . ID=gene-NIV78_RS03465;Name=NIV78_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03465 NZ_CP100136.1 Protein Homology CDS 732164 732553 . - 0 ID=cds-WP_012734769.1;Parent=gene-NIV78_RS03465;Dbxref=Genbank:WP_012734769.1;Name=WP_012734769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185460.1;locus_tag=NIV78_RS03465;product=phage holin family protein;protein_id=WP_012734769.1;transl_table=11 NZ_CP100136.1 RefSeq gene 732663 732965 . - . ID=gene-NIV78_RS03470;Name=NIV78_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03470 NZ_CP100136.1 Protein Homology CDS 732663 732965 . - 0 ID=cds-WP_012734770.1;Parent=gene-NIV78_RS03470;Dbxref=Genbank:WP_012734770.1;Name=WP_012734770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883416.1;locus_tag=NIV78_RS03470;product=YqjD family protein;protein_id=WP_012734770.1;transl_table=11 NZ_CP100136.1 RefSeq gene 733293 733934 . + . ID=gene-NIV78_RS03475;Name=NIV78_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03475 NZ_CP100136.1 Protein Homology CDS 733293 733934 . + 0 ID=cds-WP_012734771.1;Parent=gene-NIV78_RS03475;Dbxref=Genbank:WP_012734771.1;Name=WP_012734771.1;Ontology_term=GO:0098869,GO:0008379,GO:0051920;gbkey=CDS;go_function=thioredoxin peroxidase activity|0008379||IEA,peroxiredoxin activity|0051920||IEA;go_process=cellular oxidant detoxification|0098869||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734771.1;locus_tag=NIV78_RS03475;product=peroxiredoxin;protein_id=WP_012734771.1;transl_table=11 NZ_CP100136.1 RefSeq gene 734076 735263 . - . ID=gene-NIV78_RS03480;Name=NIV78_RS03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03480 NZ_CP100136.1 Protein Homology CDS 734076 735263 . - 0 ID=cds-WP_012734772.1;Parent=gene-NIV78_RS03480;Dbxref=Genbank:WP_012734772.1;Name=WP_012734772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734772.1;locus_tag=NIV78_RS03480;product=acyl-CoA dehydrogenase;protein_id=WP_012734772.1;transl_table=11 NZ_CP100136.1 RefSeq gene 735330 736130 . + . ID=gene-NIV78_RS03485;Name=NIV78_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03485 NZ_CP100136.1 Protein Homology CDS 735330 736130 . + 0 ID=cds-WP_017423416.1;Parent=gene-NIV78_RS03485;Dbxref=Genbank:WP_017423416.1;Name=WP_017423416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423416.1;locus_tag=NIV78_RS03485;product=IclR family transcriptional regulator;protein_id=WP_017423416.1;transl_table=11 NZ_CP100136.1 RefSeq gene 736192 736998 . - . ID=gene-NIV78_RS03490;Name=NIV78_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03490 NZ_CP100136.1 Protein Homology CDS 736192 736998 . - 0 ID=cds-WP_012734774.1;Parent=gene-NIV78_RS03490;Dbxref=Genbank:WP_012734774.1;Name=WP_012734774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106018.1;locus_tag=NIV78_RS03490;product=EAL domain-containing protein;protein_id=WP_012734774.1;transl_table=11 NZ_CP100136.1 RefSeq gene 737366 738721 . + . ID=gene-NIV78_RS03495;Name=NIV78_RS03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03495 NZ_CP100136.1 Protein Homology CDS 737366 738721 . + 0 ID=cds-WP_017423414.1;Parent=gene-NIV78_RS03495;Dbxref=Genbank:WP_017423414.1;Name=WP_017423414.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734775.1;locus_tag=NIV78_RS03495;product=MFS transporter;protein_id=WP_017423414.1;transl_table=11 NZ_CP100136.1 RefSeq gene 738771 739952 . - . ID=gene-NIV78_RS03500;Name=NIV78_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03500 NZ_CP100136.1 Protein Homology CDS 738771 739952 . - 0 ID=cds-WP_012734776.1;Parent=gene-NIV78_RS03500;Dbxref=Genbank:WP_012734776.1;Name=WP_012734776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417088.1;locus_tag=NIV78_RS03500;product=MFS transporter;protein_id=WP_012734776.1;transl_table=11 NZ_CP100136.1 RefSeq gene 740185 741354 . - . ID=gene-NIV78_RS03505;Name=NIV78_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03505 NZ_CP100136.1 Protein Homology CDS 740185 741354 . - 0 ID=cds-WP_251107253.1;Parent=gene-NIV78_RS03505;Dbxref=Genbank:WP_251107253.1;Name=WP_251107253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186025.1;locus_tag=NIV78_RS03505;product=MFS transporter;protein_id=WP_251107253.1;transl_table=11 NZ_CP100136.1 RefSeq gene 741484 742194 . - . ID=gene-NIV78_RS03510;Name=bluB;gbkey=Gene;gene=bluB;gene_biotype=protein_coding;locus_tag=NIV78_RS03510 NZ_CP100136.1 Protein Homology CDS 741484 742194 . - 0 ID=cds-WP_017924417.1;Parent=gene-NIV78_RS03510;Dbxref=Genbank:WP_017924417.1;Name=WP_017924417.1;Ontology_term=GO:0009236,GO:0032363,GO:0016722;gbkey=CDS;gene=bluB;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;go_process=cobalamin biosynthetic process|0009236||IEA,FMN catabolic process|0032363||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424461.1;locus_tag=NIV78_RS03510;product=5%2C6-dimethylbenzimidazole synthase;protein_id=WP_017924417.1;transl_table=11 NZ_CP100136.1 RefSeq gene 742532 743506 . - . ID=gene-NIV78_RS03515;Name=NIV78_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03515 NZ_CP100136.1 Protein Homology CDS 742532 743506 . - 0 ID=cds-WP_012734779.1;Parent=gene-NIV78_RS03515;Dbxref=Genbank:WP_012734779.1;Name=WP_012734779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734779.1;locus_tag=NIV78_RS03515;product=LysR family transcriptional regulator;protein_id=WP_012734779.1;transl_table=11 NZ_CP100136.1 RefSeq gene 744233 745444 . + . ID=gene-NIV78_RS03520;Name=NIV78_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03520 NZ_CP100136.1 Protein Homology CDS 744233 745444 . + 0 ID=cds-WP_012734780.1;Parent=gene-NIV78_RS03520;Dbxref=Genbank:WP_012734780.1;Name=WP_012734780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696799.1;locus_tag=NIV78_RS03520;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=WP_012734780.1;transl_table=11 NZ_CP100136.1 RefSeq gene 745698 746915 . - . ID=gene-NIV78_RS03525;Name=NIV78_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03525 NZ_CP100136.1 Protein Homology CDS 745698 746915 . - 0 ID=cds-WP_012734781.1;Parent=gene-NIV78_RS03525;Dbxref=Genbank:WP_012734781.1;Name=WP_012734781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004538680.1;locus_tag=NIV78_RS03525;product=MFS transporter;protein_id=WP_012734781.1;transl_table=11 NZ_CP100136.1 RefSeq gene 747195 748775 . + . ID=gene-NIV78_RS03530;Name=xdhA;gbkey=Gene;gene=xdhA;gene_biotype=protein_coding;locus_tag=NIV78_RS03530 NZ_CP100136.1 Protein Homology CDS 747195 748775 . + 0 ID=cds-WP_100555852.1;Parent=gene-NIV78_RS03530;Dbxref=Genbank:WP_100555852.1;Name=WP_100555852.1;Ontology_term=GO:0009115,GO:0004854;gbkey=CDS;gene=xdhA;go_function=xanthine dehydrogenase activity|0004854||IEA;go_process=xanthine catabolic process|0009115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734782.1;locus_tag=NIV78_RS03530;product=xanthine dehydrogenase small subunit;protein_id=WP_100555852.1;transl_table=11 NZ_CP100136.1 RefSeq gene 748804 751158 . + . ID=gene-NIV78_RS03535;Name=xdhB;gbkey=Gene;gene=xdhB;gene_biotype=protein_coding;locus_tag=NIV78_RS03535 NZ_CP100136.1 Protein Homology CDS 748804 751158 . + 0 ID=cds-WP_012734783.1;Parent=gene-NIV78_RS03535;Dbxref=Genbank:WP_012734783.1;Name=WP_012734783.1;Ontology_term=GO:0009115,GO:0004854,GO:0043546;gbkey=CDS;gene=xdhB;go_function=xanthine dehydrogenase activity|0004854||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=xanthine catabolic process|0009115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602156.1;locus_tag=NIV78_RS03535;product=xanthine dehydrogenase molybdopterin binding subunit;protein_id=WP_012734783.1;transl_table=11 NZ_CP100136.1 RefSeq gene 751165 751725 . + . ID=gene-NIV78_RS03540;Name=xdhC;gbkey=Gene;gene=xdhC;gene_biotype=protein_coding;locus_tag=NIV78_RS03540 NZ_CP100136.1 Protein Homology CDS 751165 751725 . + 0 ID=cds-WP_161521276.1;Parent=gene-NIV78_RS03540;Dbxref=Genbank:WP_161521276.1;Name=WP_161521276.1;Ontology_term=GO:0009115,GO:0065003,GO:0043546;gbkey=CDS;gene=xdhC;go_function=molybdopterin cofactor binding|0043546||IEA;go_process=xanthine catabolic process|0009115||IEA,protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734784.1;locus_tag=NIV78_RS03540;product=xanthine dehydrogenase accessory protein XdhC;protein_id=WP_161521276.1;transl_table=11 NZ_CP100136.1 RefSeq gene 751863 752681 . + . ID=gene-NIV78_RS03545;Name=NIV78_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03545 NZ_CP100136.1 Protein Homology CDS 751863 752681 . + 0 ID=cds-WP_017924047.1;Parent=gene-NIV78_RS03545;Dbxref=Genbank:WP_017924047.1;Name=WP_017924047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017454077.1;locus_tag=NIV78_RS03545;product=substrate-binding domain-containing protein;protein_id=WP_017924047.1;transl_table=11 NZ_CP100136.1 RefSeq gene 752815 753219 . + . ID=gene-NIV78_RS03550;Name=NIV78_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03550 NZ_CP100136.1 Protein Homology CDS 752815 753219 . + 0 ID=cds-WP_043226997.1;Parent=gene-NIV78_RS03550;Dbxref=Genbank:WP_043226997.1;Name=WP_043226997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656100.1;locus_tag=NIV78_RS03550;product=polyketide cyclase;protein_id=WP_043226997.1;transl_table=11 NZ_CP100136.1 RefSeq gene 753226 754200 . - . ID=gene-NIV78_RS03555;Name=NIV78_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03555 NZ_CP100136.1 Protein Homology CDS 753226 754200 . - 0 ID=cds-WP_012734787.1;Parent=gene-NIV78_RS03555;Dbxref=Genbank:WP_012734787.1;Name=WP_012734787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734787.1;locus_tag=NIV78_RS03555;product=LysR family transcriptional regulator;protein_id=WP_012734787.1;transl_table=11 NZ_CP100136.1 RefSeq gene 754298 754936 . - . ID=gene-NIV78_RS03560;Name=NIV78_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03560 NZ_CP100136.1 Protein Homology CDS 754298 754936 . - 0 ID=cds-WP_012734788.1;Parent=gene-NIV78_RS03560;Dbxref=Genbank:WP_012734788.1;Name=WP_012734788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734788.1;locus_tag=NIV78_RS03560;product=2-hydroxychromene-2-carboxylate isomerase;protein_id=WP_012734788.1;transl_table=11 NZ_CP100136.1 RefSeq gene 755110 756507 . - . ID=gene-NIV78_RS03565;Name=NIV78_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03565 NZ_CP100136.1 Protein Homology CDS 755110 756507 . - 0 ID=cds-WP_017924113.1;Parent=gene-NIV78_RS03565;Dbxref=Genbank:WP_017924113.1;Name=WP_017924113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734789.1;locus_tag=NIV78_RS03565;product=C4-dicarboxylate ABC transporter substrate-binding protein;protein_id=WP_017924113.1;transl_table=11 NZ_CP100136.1 RefSeq gene 756929 757297 . + . ID=gene-NIV78_RS03570;Name=NIV78_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03570 NZ_CP100136.1 Protein Homology CDS 756929 757297 . + 0 ID=cds-WP_012734790.1;Parent=gene-NIV78_RS03570;Dbxref=Genbank:WP_012734790.1;Name=WP_012734790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759602.1;locus_tag=NIV78_RS03570;product=BON domain-containing protein;protein_id=WP_012734790.1;transl_table=11 NZ_CP100136.1 RefSeq gene 757430 758218 . - . ID=gene-NIV78_RS03575;Name=NIV78_RS03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03575 NZ_CP100136.1 Protein Homology CDS 757430 758218 . - 0 ID=cds-WP_012734791.1;Parent=gene-NIV78_RS03575;Dbxref=Genbank:WP_012734791.1;Name=WP_012734791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004535504.1;locus_tag=NIV78_RS03575;product=sulfite exporter TauE/SafE family protein;protein_id=WP_012734791.1;transl_table=11 NZ_CP100136.1 RefSeq gene 758457 759380 . + . ID=gene-NIV78_RS03580;Name=NIV78_RS03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03580 NZ_CP100136.1 Protein Homology CDS 758457 759380 . + 0 ID=cds-WP_012734792.1;Parent=gene-NIV78_RS03580;Dbxref=Genbank:WP_012734792.1;Name=WP_012734792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696811.1;locus_tag=NIV78_RS03580;product=LysR family transcriptional regulator;protein_id=WP_012734792.1;transl_table=11 NZ_CP100136.1 RefSeq gene 759930 762449 . + . ID=gene-NIV78_RS03585;Name=NIV78_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03585 NZ_CP100136.1 GeneMarkS-2+ CDS 759930 762449 . + 0 ID=cds-WP_251107257.1;Parent=gene-NIV78_RS03585;Dbxref=Genbank:WP_251107257.1;Name=WP_251107257.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS03585;product=hypothetical protein;protein_id=WP_251107257.1;transl_table=11 NZ_CP100136.1 RefSeq gene 762855 764564 . + . ID=gene-NIV78_RS03590;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=NIV78_RS03590 NZ_CP100136.1 Protein Homology CDS 762855 764564 . + 0 ID=cds-WP_251107258.1;Parent=gene-NIV78_RS03590;Dbxref=Genbank:WP_251107258.1;Name=WP_251107258.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaL;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011490802.1;locus_tag=NIV78_RS03590;product=dihydroxyacetone kinase subunit DhaL;protein_id=WP_251107258.1;transl_table=11 NZ_CP100136.1 RefSeq gene 764691 765746 . + . ID=gene-NIV78_RS03595;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=NIV78_RS03595 NZ_CP100136.1 Protein Homology CDS 764691 765746 . + 0 ID=cds-WP_012734795.1;Parent=gene-NIV78_RS03595;Dbxref=Genbank:WP_012734795.1;Name=WP_012734795.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696813.1;locus_tag=NIV78_RS03595;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WP_012734795.1;transl_table=11 NZ_CP100136.1 RefSeq gene 766437 766730 . + . ID=gene-NIV78_RS03600;Name=NIV78_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03600 NZ_CP100136.1 Protein Homology CDS 766437 766730 . + 0 ID=cds-WP_012734796.1;Parent=gene-NIV78_RS03600;Dbxref=Genbank:WP_012734796.1;Name=WP_012734796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734796.1;locus_tag=NIV78_RS03600;product=co-chaperone GroES;protein_id=WP_012734796.1;transl_table=11 NZ_CP100136.1 RefSeq gene 766776 768416 . + . ID=gene-NIV78_RS03605;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=NIV78_RS03605 NZ_CP100136.1 Protein Homology CDS 766776 768416 . + 0 ID=cds-WP_012734797.1;Parent=gene-NIV78_RS03605;Dbxref=Genbank:WP_012734797.1;Name=WP_012734797.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0006457,GO:0005515,GO:0016887;gbkey=CDS;gene=groL;go_function=protein binding|0005515||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753915.1;locus_tag=NIV78_RS03605;product=chaperonin GroEL;protein_id=WP_012734797.1;transl_table=11 NZ_CP100136.1 RefSeq gene 768568 769431 . - . ID=gene-NIV78_RS03610;Name=NIV78_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03610 NZ_CP100136.1 Protein Homology CDS 768568 769431 . - 0 ID=cds-WP_012734798.1;Parent=gene-NIV78_RS03610;Dbxref=Genbank:WP_012734798.1;Name=WP_012734798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696820.1;locus_tag=NIV78_RS03610;product=hydroxymethylpyrimidine/phosphomethylpyrimidine kinase;protein_id=WP_012734798.1;transl_table=11 NZ_CP100136.1 RefSeq gene 769758 769928 . + . ID=gene-NIV78_RS03615;Name=NIV78_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03615 NZ_CP100136.1 Protein Homology CDS 769758 769928 . + 0 ID=cds-WP_006400971.1;Parent=gene-NIV78_RS03615;Dbxref=Genbank:WP_006400971.1;Name=WP_006400971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013436118.1;locus_tag=NIV78_RS03615;product=rubredoxin;protein_id=WP_006400971.1;transl_table=11 NZ_CP100136.1 RefSeq gene 770048 771334 . + . ID=gene-NIV78_RS03620;Name=NIV78_RS03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03620 NZ_CP100136.1 Protein Homology CDS 770048 771334 . + 0 ID=cds-WP_100555843.1;Parent=gene-NIV78_RS03620;Dbxref=Genbank:WP_100555843.1;Name=WP_100555843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734799.1;locus_tag=NIV78_RS03620;product=hypothetical protein;protein_id=WP_100555843.1;transl_table=11 NZ_CP100136.1 RefSeq gene 771677 772255 . + . ID=gene-NIV78_RS03625;Name=NIV78_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03625 NZ_CP100136.1 Protein Homology CDS 771677 772255 . + 0 ID=cds-WP_012734800.1;Parent=gene-NIV78_RS03625;Dbxref=Genbank:WP_012734800.1;Name=WP_012734800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185441.1;locus_tag=NIV78_RS03625;product=YqgE/AlgH family protein;protein_id=WP_012734800.1;transl_table=11 NZ_CP100136.1 RefSeq gene 772252 772710 . + . ID=gene-NIV78_RS03630;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=NIV78_RS03630 NZ_CP100136.1 Protein Homology CDS 772252 772710 . + 0 ID=cds-WP_012734801.1;Parent=gene-NIV78_RS03630;Dbxref=Genbank:WP_012734801.1;Name=WP_012734801.1;Ontology_term=GO:0008150,GO:0003674,GO:0005737;gbkey=CDS;gene=ruvX;go_component=cytoplasm|0005737||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025496.1;locus_tag=NIV78_RS03630;product=Holliday junction resolvase RuvX;protein_id=WP_012734801.1;transl_table=11 NZ_CP100136.1 RefSeq gene 772697 773215 . + . ID=gene-NIV78_RS03635;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=NIV78_RS03635 NZ_CP100136.1 Protein Homology CDS 772697 773215 . + 0 ID=cds-WP_012734802.1;Parent=gene-NIV78_RS03635;Dbxref=Genbank:WP_012734802.1;Name=WP_012734802.1;Ontology_term=GO:0009116;gbkey=CDS;gene=pyrR;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734802.1;locus_tag=NIV78_RS03635;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;protein_id=WP_012734802.1;transl_table=11 NZ_CP100136.1 RefSeq gene 773298 774329 . + . ID=gene-NIV78_RS03640;Name=NIV78_RS03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03640 NZ_CP100136.1 Protein Homology CDS 773298 774329 . + 0 ID=cds-WP_012734803.1;Parent=gene-NIV78_RS03640;Dbxref=Genbank:WP_012734803.1;Name=WP_012734803.1;Ontology_term=GO:0006207,GO:0006520,GO:0004070,GO:0016597;gbkey=CDS;go_function=aspartate carbamoyltransferase activity|0004070||IEA,amino acid binding|0016597||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,cellular amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600263.1;locus_tag=NIV78_RS03640;product=aspartate carbamoyltransferase catalytic subunit;protein_id=WP_012734803.1;transl_table=11 NZ_CP100136.1 RefSeq gene 774400 775677 . + . ID=gene-NIV78_RS03645;Name=NIV78_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03645 NZ_CP100136.1 Protein Homology CDS 774400 775677 . + 0 ID=cds-WP_017923690.1;Parent=gene-NIV78_RS03645;Dbxref=Genbank:WP_017923690.1;Name=WP_017923690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696826.1;locus_tag=NIV78_RS03645;product=dihydroorotase;protein_id=WP_017923690.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 775691 776458 . + . ID=gene-NIV78_RS03650;Name=NIV78_RS03650;end_range=776458,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS03650;partial=true;pseudo=true NZ_CP100136.1 Protein Homology CDS 775691 776458 . + 0 ID=cds-NIV78_RS03650;Parent=gene-NIV78_RS03650;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=776458,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186297.1;locus_tag=NIV78_RS03650;partial=true;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 776614 777465 . - . ID=gene-NIV78_RS03655;Name=NIV78_RS03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03655 NZ_CP100136.1 Protein Homology CDS 776614 777465 . - 0 ID=cds-WP_017424957.1;Parent=gene-NIV78_RS03655;Dbxref=Genbank:WP_017424957.1;Name=WP_017424957.1;Ontology_term=GO:0008803;gbkey=CDS;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734806.1;locus_tag=NIV78_RS03655;product=symmetrical bis(5'-nucleosyl)-tetraphosphatase;protein_id=WP_017424957.1;transl_table=11 NZ_CP100136.1 RefSeq gene 777867 778928 . + . ID=gene-NIV78_RS03660;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=NIV78_RS03660 NZ_CP100136.1 Protein Homology CDS 777867 778928 . + 0 ID=cds-WP_017425485.1;Parent=gene-NIV78_RS03660;Dbxref=Genbank:WP_017425485.1;Name=WP_017425485.1;Ontology_term=GO:0009243,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406347.1;locus_tag=NIV78_RS03660;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_017425485.1;transl_table=11 NZ_CP100136.1 RefSeq gene 778939 779832 . + . ID=gene-NIV78_RS03665;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=NIV78_RS03665 NZ_CP100136.1 Protein Homology CDS 778939 779832 . + 0 ID=cds-WP_012734808.1;Parent=gene-NIV78_RS03665;Dbxref=Genbank:WP_012734808.1;Name=WP_012734808.1;Ontology_term=GO:0009243,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328029.1;locus_tag=NIV78_RS03665;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_012734808.1;transl_table=11 NZ_CP100136.1 RefSeq gene 779817 780368 . + . ID=gene-NIV78_RS03670;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=NIV78_RS03670 NZ_CP100136.1 Protein Homology CDS 779817 780368 . + 0 ID=cds-WP_012734809.1;Parent=gene-NIV78_RS03670;Dbxref=Genbank:WP_012734809.1;Name=WP_012734809.1;Ontology_term=GO:0009243,GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008920718.1;locus_tag=NIV78_RS03670;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_012734809.1;transl_table=11 NZ_CP100136.1 RefSeq gene 780380 781276 . + . ID=gene-NIV78_RS03675;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=NIV78_RS03675 NZ_CP100136.1 Protein Homology CDS 780380 781276 . + 0 ID=cds-WP_035982949.1;Parent=gene-NIV78_RS03675;Dbxref=Genbank:WP_035982949.1;Name=WP_035982949.1;Ontology_term=GO:0009243,GO:0019305,GO:0008831;gbkey=CDS;gene=rfbD;go_function=dTDP-4-dehydrorhamnose reductase activity|0008831||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734810.1;locus_tag=NIV78_RS03675;product=dTDP-4-dehydrorhamnose reductase;protein_id=WP_035982949.1;transl_table=11 NZ_CP100136.1 RefSeq gene 781255 782181 . + . ID=gene-NIV78_RS03680;Name=NIV78_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03680 NZ_CP100136.1 Protein Homology CDS 781255 782181 . + 0 ID=cds-WP_017923198.1;Parent=gene-NIV78_RS03680;Dbxref=Genbank:WP_017923198.1;Name=WP_017923198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734811.1;locus_tag=NIV78_RS03680;product=glycosyltransferase family 2 protein;protein_id=WP_017923198.1;transl_table=11 NZ_CP100136.1 RefSeq gene 782232 784229 . - . ID=gene-NIV78_RS03685;Name=NIV78_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03685 NZ_CP100136.1 Protein Homology CDS 782232 784229 . - 0 ID=cds-WP_017425356.1;Parent=gene-NIV78_RS03685;Dbxref=Genbank:WP_017425356.1;Name=WP_017425356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425356.1;locus_tag=NIV78_RS03685;product=glycosyltransferase family 2 protein;protein_id=WP_017425356.1;transl_table=11 NZ_CP100136.1 RefSeq gene 784272 785708 . - . ID=gene-NIV78_RS03690;Name=NIV78_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03690 NZ_CP100136.1 Protein Homology CDS 784272 785708 . - 0 ID=cds-WP_161521285.1;Parent=gene-NIV78_RS03690;Dbxref=Genbank:WP_161521285.1;Name=WP_161521285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734813.1;locus_tag=NIV78_RS03690;product=ABC transporter ATP-binding protein;protein_id=WP_161521285.1;transl_table=11 NZ_CP100136.1 RefSeq gene 785698 786522 . - . ID=gene-NIV78_RS03695;Name=NIV78_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03695 NZ_CP100136.1 Protein Homology CDS 785698 786522 . - 0 ID=cds-WP_012734814.1;Parent=gene-NIV78_RS03695;Dbxref=Genbank:WP_012734814.1;Name=WP_012734814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734814.1;locus_tag=NIV78_RS03695;product=ABC transporter permease;protein_id=WP_012734814.1;transl_table=11 NZ_CP100136.1 RefSeq gene 786988 788361 . + . ID=gene-NIV78_RS03700;Name=NIV78_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03700 NZ_CP100136.1 Protein Homology CDS 786988 788361 . + 0 ID=cds-WP_251107261.1;Parent=gene-NIV78_RS03700;Dbxref=Genbank:WP_251107261.1;Name=WP_251107261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734815.1;locus_tag=NIV78_RS03700;product=Wzt carbohydrate-binding domain-containing protein;protein_id=WP_251107261.1;transl_table=11 NZ_CP100136.1 RefSeq gene 788440 791742 . + . ID=gene-NIV78_RS03705;Name=NIV78_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03705 NZ_CP100136.1 Protein Homology CDS 788440 791742 . + 0 ID=cds-WP_251107262.1;Parent=gene-NIV78_RS03705;Dbxref=Genbank:WP_251107262.1;Name=WP_251107262.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696838.1;locus_tag=NIV78_RS03705;product=methyltransferase domain-containing protein;protein_id=WP_251107262.1;transl_table=11 NZ_CP100136.1 RefSeq gene 791771 793006 . + . ID=gene-NIV78_RS03710;Name=NIV78_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03710 NZ_CP100136.1 Protein Homology CDS 791771 793006 . + 0 ID=cds-WP_012734817.1;Parent=gene-NIV78_RS03710;Dbxref=Genbank:WP_012734817.1;Name=WP_012734817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734817.1;locus_tag=NIV78_RS03710;product=glycosyltransferase family 4 protein;protein_id=WP_012734817.1;transl_table=11 NZ_CP100136.1 RefSeq gene 793019 793597 . + . ID=gene-NIV78_RS03715;Name=NIV78_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03715 NZ_CP100136.1 Protein Homology CDS 793019 793597 . + 0 ID=cds-WP_012734818.1;Parent=gene-NIV78_RS03715;Dbxref=Genbank:WP_012734818.1;Name=WP_012734818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734818.1;locus_tag=NIV78_RS03715;product=acyltransferase;protein_id=WP_012734818.1;transl_table=11 NZ_CP100136.1 RefSeq gene 793641 794678 . + . ID=gene-NIV78_RS03720;Name=NIV78_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03720 NZ_CP100136.1 Protein Homology CDS 793641 794678 . + 0 ID=cds-WP_017923202.1;Parent=gene-NIV78_RS03720;Dbxref=Genbank:WP_017923202.1;Name=WP_017923202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696841.1;locus_tag=NIV78_RS03720;product=glycosyltransferase family 2 protein;protein_id=WP_017923202.1;transl_table=11 NZ_CP100136.1 RefSeq gene 794705 795556 . + . ID=gene-NIV78_RS03725;Name=NIV78_RS03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03725 NZ_CP100136.1 Protein Homology CDS 794705 795556 . + 0 ID=cds-WP_017923201.1;Parent=gene-NIV78_RS03725;Dbxref=Genbank:WP_017923201.1;Name=WP_017923201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734820.1;locus_tag=NIV78_RS03725;product=glycosyltransferase family 2 protein;protein_id=WP_017923201.1;transl_table=11 NZ_CP100136.1 RefSeq gene 795553 796536 . + . ID=gene-NIV78_RS03730;Name=NIV78_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03730 NZ_CP100136.1 Protein Homology CDS 795553 796536 . + 0 ID=cds-WP_012734821.1;Parent=gene-NIV78_RS03730;Dbxref=Genbank:WP_012734821.1;Name=WP_012734821.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009913376.1;locus_tag=NIV78_RS03730;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_012734821.1;transl_table=11 NZ_CP100136.1 RefSeq gene 796547 797590 . + . ID=gene-NIV78_RS03735;Name=NIV78_RS03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03735 NZ_CP100136.1 Protein Homology CDS 796547 797590 . + 0 ID=cds-WP_017923012.1;Parent=gene-NIV78_RS03735;Dbxref=Genbank:WP_017923012.1;Name=WP_017923012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734822.1;locus_tag=NIV78_RS03735;product=glycosyl transferase;protein_id=WP_017923012.1;transl_table=11 NZ_CP100136.1 RefSeq gene 797587 799470 . + . ID=gene-NIV78_RS03740;Name=NIV78_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03740 NZ_CP100136.1 Protein Homology CDS 797587 799470 . + 0 ID=cds-WP_012734823.1;Parent=gene-NIV78_RS03740;Dbxref=Genbank:WP_012734823.1;Name=WP_012734823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734823.1;locus_tag=NIV78_RS03740;product=polysaccharide biosynthesis protein;protein_id=WP_012734823.1;transl_table=11 NZ_CP100136.1 RefSeq gene 799575 800687 . - . ID=gene-NIV78_RS03745;Name=NIV78_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03745 NZ_CP100136.1 Protein Homology CDS 799575 800687 . - 0 ID=cds-WP_257757202.1;Parent=gene-NIV78_RS03745;Dbxref=Genbank:WP_257757202.1;Name=WP_257757202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734824.1;locus_tag=NIV78_RS03745;product=glycosyltransferase;protein_id=WP_257757202.1;transl_table=11 NZ_CP100136.1 RefSeq gene 800884 801906 . - . ID=gene-NIV78_RS03750;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=NIV78_RS03750 NZ_CP100136.1 Protein Homology CDS 800884 801906 . - 0 ID=cds-WP_012734825.1;Parent=gene-NIV78_RS03750;Dbxref=Genbank:WP_012734825.1;Name=WP_012734825.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734825.1;locus_tag=NIV78_RS03750;product=UDP-glucose 4-epimerase GalE;protein_id=WP_012734825.1;transl_table=11 NZ_CP100136.1 RefSeq gene 801919 803055 . - . ID=gene-NIV78_RS03755;Name=NIV78_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03755 NZ_CP100136.1 Protein Homology CDS 801919 803055 . - 0 ID=cds-WP_012734826.1;Parent=gene-NIV78_RS03755;Dbxref=Genbank:WP_012734826.1;Name=WP_012734826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696848.1;locus_tag=NIV78_RS03755;product=glycosyltransferase family 4 protein;protein_id=WP_012734826.1;transl_table=11 NZ_CP100136.1 RefSeq gene 803090 803917 . - . ID=gene-NIV78_RS03760;Name=NIV78_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03760 NZ_CP100136.1 Protein Homology CDS 803090 803917 . - 0 ID=cds-WP_017923011.1;Parent=gene-NIV78_RS03760;Dbxref=Genbank:WP_017923011.1;Name=WP_017923011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889604.1;locus_tag=NIV78_RS03760;product=glycosyltransferase;protein_id=WP_017923011.1;transl_table=11 NZ_CP100136.1 RefSeq gene 803914 805176 . - . ID=gene-NIV78_RS03765;Name=NIV78_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03765 NZ_CP100136.1 Protein Homology CDS 803914 805176 . - 0 ID=cds-WP_251107263.1;Parent=gene-NIV78_RS03765;Dbxref=Genbank:WP_251107263.1;Name=WP_251107263.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424889.1;locus_tag=NIV78_RS03765;product=oligosaccharide flippase family protein;protein_id=WP_251107263.1;transl_table=11 NZ_CP100136.1 RefSeq gene 805428 806822 . + . ID=gene-NIV78_RS03770;Name=NIV78_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03770 NZ_CP100136.1 Protein Homology CDS 805428 806822 . + 0 ID=cds-WP_017923009.1;Parent=gene-NIV78_RS03770;Dbxref=Genbank:WP_017923009.1;Name=WP_017923009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897868.1;locus_tag=NIV78_RS03770;product=phosphomannomutase/phosphoglucomutase;protein_id=WP_017923009.1;transl_table=11 NZ_CP100136.1 RefSeq gene 807070 808065 . + . ID=gene-NIV78_RS03775;Name=waaC;gbkey=Gene;gene=waaC;gene_biotype=protein_coding;locus_tag=NIV78_RS03775 NZ_CP100136.1 Protein Homology CDS 807070 808065 . + 0 ID=cds-WP_017424859.1;Parent=gene-NIV78_RS03775;Dbxref=Genbank:WP_017424859.1;Name=WP_017424859.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=waaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696852.1;locus_tag=NIV78_RS03775;product=lipopolysaccharide heptosyltransferase I;protein_id=WP_017424859.1;transl_table=11 NZ_CP100136.1 RefSeq gene 808076 808960 . + . ID=gene-NIV78_RS03780;Name=NIV78_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03780 NZ_CP100136.1 Protein Homology CDS 808076 808960 . + 0 ID=cds-WP_012734831.1;Parent=gene-NIV78_RS03780;Dbxref=Genbank:WP_012734831.1;Name=WP_012734831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332912.1;locus_tag=NIV78_RS03780;product=Kdo hydroxylase family protein;protein_id=WP_012734831.1;transl_table=11 NZ_CP100136.1 RefSeq gene 809001 810392 . + . ID=gene-NIV78_RS03785;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=NIV78_RS03785 NZ_CP100136.1 Protein Homology CDS 809001 810392 . + 0 ID=cds-WP_100555839.1;Parent=gene-NIV78_RS03785;Dbxref=Genbank:WP_100555839.1;Name=WP_100555839.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734832.1;locus_tag=NIV78_RS03785;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_100555839.1;transl_table=11 NZ_CP100136.1 RefSeq gene 810475 811134 . - . ID=gene-NIV78_RS03790;Name=ureG;gbkey=Gene;gene=ureG;gene_biotype=protein_coding;locus_tag=NIV78_RS03790 NZ_CP100136.1 Protein Homology CDS 810475 811134 . - 0 ID=cds-WP_043194480.1;Parent=gene-NIV78_RS03790;Dbxref=Genbank:WP_043194480.1;Name=WP_043194480.1;Ontology_term=GO:0019627,GO:0016530,GO:0046872;gbkey=CDS;gene=ureG;go_function=metallochaperone activity|0016530||IEA,metal ion binding|0046872||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656154.1;locus_tag=NIV78_RS03790;product=urease accessory protein UreG;protein_id=WP_043194480.1;transl_table=11 NZ_CP100136.1 RefSeq gene 811131 811811 . - . ID=gene-NIV78_RS03795;Name=NIV78_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03795 NZ_CP100136.1 Protein Homology CDS 811131 811811 . - 0 ID=cds-WP_012734834.1;Parent=gene-NIV78_RS03795;Dbxref=Genbank:WP_012734834.1;Name=WP_012734834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601275.1;locus_tag=NIV78_RS03795;product=urease accessory protein UreF;protein_id=WP_012734834.1;transl_table=11 NZ_CP100136.1 RefSeq gene 811798 812511 . - . ID=gene-NIV78_RS03800;Name=ureE;gbkey=Gene;gene=ureE;gene_biotype=protein_coding;locus_tag=NIV78_RS03800 NZ_CP100136.1 Protein Homology CDS 811798 812511 . - 0 ID=cds-WP_017923744.1;Parent=gene-NIV78_RS03800;Dbxref=Genbank:WP_017923744.1;Name=WP_017923744.1;Ontology_term=GO:0019627,GO:0016151;gbkey=CDS;gene=ureE;go_function=nickel cation binding|0016151||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734835.1;locus_tag=NIV78_RS03800;product=urease accessory protein UreE;protein_id=WP_017923744.1;transl_table=11 NZ_CP100136.1 RefSeq gene 812519 814225 . - . ID=gene-NIV78_RS03805;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=NIV78_RS03805 NZ_CP100136.1 Protein Homology CDS 812519 814225 . - 0 ID=cds-WP_257757203.1;Parent=gene-NIV78_RS03805;Dbxref=Genbank:WP_257757203.1;Name=WP_257757203.1;Ontology_term=GO:0019627,GO:0009039,GO:0016151;gbkey=CDS;gene=ureC;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758739.1;locus_tag=NIV78_RS03805;product=urease subunit alpha;protein_id=WP_257757203.1;transl_table=11 NZ_CP100136.1 RefSeq gene 814288 814593 . - . ID=gene-NIV78_RS03810;Name=NIV78_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03810 NZ_CP100136.1 Protein Homology CDS 814288 814593 . - 0 ID=cds-WP_012734837.1;Parent=gene-NIV78_RS03810;Dbxref=Genbank:WP_012734837.1;Name=WP_012734837.1;Ontology_term=GO:0043419,GO:0035550;gbkey=CDS;go_component=urease complex|0035550||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332918.1;locus_tag=NIV78_RS03810;product=urease subunit beta;protein_id=WP_012734837.1;transl_table=11 NZ_CP100136.1 RefSeq gene 814601 814903 . - . ID=gene-NIV78_RS03815;Name=NIV78_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03815 NZ_CP100136.1 Protein Homology CDS 814601 814903 . - 0 ID=cds-WP_012734838.1;Parent=gene-NIV78_RS03815;Dbxref=Genbank:WP_012734838.1;Name=WP_012734838.1;Ontology_term=GO:0043419,GO:0009039,GO:0016151;gbkey=CDS;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008923043.1;locus_tag=NIV78_RS03815;product=urease subunit gamma;protein_id=WP_012734838.1;transl_table=11 NZ_CP100136.1 RefSeq gene 815127 816041 . - . ID=gene-NIV78_RS03820;Name=NIV78_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03820 NZ_CP100136.1 Protein Homology CDS 815127 816041 . - 0 ID=cds-WP_251107264.1;Parent=gene-NIV78_RS03820;Dbxref=Genbank:WP_251107264.1;Name=WP_251107264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734839.1;locus_tag=NIV78_RS03820;product=urease accessory protein UreD;protein_id=WP_251107264.1;transl_table=11 NZ_CP100136.1 RefSeq gene 816296 816610 . + . ID=gene-NIV78_RS03825;Name=NIV78_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03825 NZ_CP100136.1 Protein Homology CDS 816296 816610 . + 0 ID=cds-WP_012734840.1;Parent=gene-NIV78_RS03825;Dbxref=Genbank:WP_012734840.1;Name=WP_012734840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734840.1;locus_tag=NIV78_RS03825;product=antibiotic biosynthesis monooxygenase;protein_id=WP_012734840.1;transl_table=11 NZ_CP100136.1 RefSeq gene 816714 817406 . - . ID=gene-NIV78_RS03830;Name=urtE;gbkey=Gene;gene=urtE;gene_biotype=protein_coding;locus_tag=NIV78_RS03830 NZ_CP100136.1 Protein Homology CDS 816714 817406 . - 0 ID=cds-WP_012734841.1;Parent=gene-NIV78_RS03830;Dbxref=Genbank:WP_012734841.1;Name=WP_012734841.1;Ontology_term=GO:0015840,GO:0005524,GO:0033221,GO:0009898,GO:0055052;gbkey=CDS;gene=urtE;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332923.1;locus_tag=NIV78_RS03830;product=urea ABC transporter ATP-binding subunit UrtE;protein_id=WP_012734841.1;transl_table=11 NZ_CP100136.1 RefSeq gene 817430 818260 . - . ID=gene-NIV78_RS03835;Name=urtD;gbkey=Gene;gene=urtD;gene_biotype=protein_coding;locus_tag=NIV78_RS03835 NZ_CP100136.1 Protein Homology CDS 817430 818260 . - 0 ID=cds-WP_017423052.1;Parent=gene-NIV78_RS03835;Dbxref=Genbank:WP_017423052.1;Name=WP_017423052.1;Ontology_term=GO:0015840,GO:0005524,GO:0033221,GO:0009898,GO:0055052;gbkey=CDS;gene=urtD;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423052.1;locus_tag=NIV78_RS03835;product=urea ABC transporter ATP-binding protein UrtD;protein_id=WP_017423052.1;transl_table=11 NZ_CP100136.1 RefSeq gene 818257 819435 . - . ID=gene-NIV78_RS03840;Name=urtC;gbkey=Gene;gene=urtC;gene_biotype=protein_coding;locus_tag=NIV78_RS03840 NZ_CP100136.1 Protein Homology CDS 818257 819435 . - 0 ID=cds-WP_251107265.1;Parent=gene-NIV78_RS03840;Dbxref=Genbank:WP_251107265.1;Name=WP_251107265.1;Ontology_term=GO:0015840,GO:0033221,GO:0005887,GO:0055052;gbkey=CDS;gene=urtC;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897856.1;locus_tag=NIV78_RS03840;product=urea ABC transporter permease subunit UrtC;protein_id=WP_251107265.1;transl_table=11 NZ_CP100136.1 RefSeq gene 819440 821053 . - . ID=gene-NIV78_RS03845;Name=urtB;gbkey=Gene;gene=urtB;gene_biotype=protein_coding;locus_tag=NIV78_RS03845 NZ_CP100136.1 Protein Homology CDS 819440 821053 . - 0 ID=cds-WP_257757204.1;Parent=gene-NIV78_RS03845;Dbxref=Genbank:WP_257757204.1;Name=WP_257757204.1;Ontology_term=GO:0015840,GO:0033221,GO:0005887,GO:0055052;gbkey=CDS;gene=urtB;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696869.1;locus_tag=NIV78_RS03845;product=urea ABC transporter permease subunit UrtB;protein_id=WP_257757204.1;transl_table=11 NZ_CP100136.1 RefSeq gene 821127 822434 . - . ID=gene-NIV78_RS03850;Name=urtA;gbkey=Gene;gene=urtA;gene_biotype=protein_coding;locus_tag=NIV78_RS03850 NZ_CP100136.1 Protein Homology CDS 821127 822434 . - 0 ID=cds-WP_017423049.1;Parent=gene-NIV78_RS03850;Dbxref=Genbank:WP_017423049.1;Name=WP_017423049.1;Ontology_term=GO:0015840,GO:0033219,GO:0033221,GO:0030288,GO:0055052;gbkey=CDS;gene=urtA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=urea binding|0033219||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734845.1;locus_tag=NIV78_RS03850;product=urea ABC transporter substrate-binding protein;protein_id=WP_017423049.1;transl_table=11 NZ_CP100136.1 RefSeq gene 822894 823217 . - . ID=gene-NIV78_RS03855;Name=NIV78_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03855 NZ_CP100136.1 Protein Homology CDS 822894 823217 . - 0 ID=cds-WP_257757380.1;Parent=gene-NIV78_RS03855;Dbxref=Genbank:WP_257757380.1;Name=WP_257757380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091617.1;locus_tag=NIV78_RS03855;product=rhodanese-like domain-containing protein;protein_id=WP_257757380.1;transl_table=11 NZ_CP100136.1 RefSeq gene 823247 823900 . - . ID=gene-NIV78_RS03860;Name=NIV78_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03860 NZ_CP100136.1 Protein Homology CDS 823247 823900 . - 0 ID=cds-WP_012734847.1;Parent=gene-NIV78_RS03860;Dbxref=Genbank:WP_012734847.1;Name=WP_012734847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332930.1;locus_tag=NIV78_RS03860;product=protein-L-isoaspartate O-methyltransferase;protein_id=WP_012734847.1;transl_table=11 NZ_CP100136.1 RefSeq gene 824006 824263 . - . ID=gene-NIV78_RS03865;Name=NIV78_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03865 NZ_CP100136.1 Protein Homology CDS 824006 824263 . - 0 ID=cds-WP_017423047.1;Parent=gene-NIV78_RS03865;Dbxref=Genbank:WP_017423047.1;Name=WP_017423047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004534051.1;locus_tag=NIV78_RS03865;product=hypothetical protein;protein_id=WP_017423047.1;transl_table=11 NZ_CP100136.1 RefSeq gene 824357 825748 . - . ID=gene-NIV78_RS03870;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=NIV78_RS03870 NZ_CP100136.1 Protein Homology CDS 824357 825748 . - 0 ID=cds-WP_017922654.1;Parent=gene-NIV78_RS03870;Dbxref=Genbank:WP_017922654.1;Name=WP_017922654.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemN;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467510.1;locus_tag=NIV78_RS03870;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_017922654.1;transl_table=11 NZ_CP100136.1 RefSeq gene 825906 826235 . + . ID=gene-NIV78_RS03875;Name=NIV78_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03875 NZ_CP100136.1 Protein Homology CDS 825906 826235 . + 0 ID=cds-WP_017423045.1;Parent=gene-NIV78_RS03875;Dbxref=Genbank:WP_017423045.1;Name=WP_017423045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734850.1;locus_tag=NIV78_RS03875;product=YkgJ family cysteine cluster protein;protein_id=WP_017423045.1;transl_table=11 NZ_CP100136.1 RefSeq gene 826232 826819 . + . ID=gene-NIV78_RS03880;Name=NIV78_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03880 NZ_CP100136.1 Protein Homology CDS 826232 826819 . + 0 ID=cds-WP_012734851.1;Parent=gene-NIV78_RS03880;Dbxref=Genbank:WP_012734851.1;Name=WP_012734851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400908.1;locus_tag=NIV78_RS03880;product=DUF1439 domain-containing protein;protein_id=WP_012734851.1;transl_table=11 NZ_CP100136.1 RefSeq gene 826910 827740 . + . ID=gene-NIV78_RS03885;Name=NIV78_RS03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03885 NZ_CP100136.1 Protein Homology CDS 826910 827740 . + 0 ID=cds-WP_012734852.1;Parent=gene-NIV78_RS03885;Dbxref=Genbank:WP_012734852.1;Name=WP_012734852.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734852.1;locus_tag=NIV78_RS03885;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_012734852.1;transl_table=11 NZ_CP100136.1 RefSeq gene 827848 828630 . - . ID=gene-NIV78_RS03890;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=NIV78_RS03890 NZ_CP100136.1 Protein Homology CDS 827848 828630 . - 0 ID=cds-WP_012734853.1;Parent=gene-NIV78_RS03890;Dbxref=Genbank:WP_012734853.1;Name=WP_012734853.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine-N7-)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752095.1;locus_tag=NIV78_RS03890;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_012734853.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 829201 829860 . - . ID=gene-NIV78_RS03895;Name=NIV78_RS03895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS03895;partial=true;pseudo=true;start_range=.,829201 NZ_CP100136.1 Protein Homology CDS 829201 829860 . - 0 ID=cds-NIV78_RS03895;Parent=gene-NIV78_RS03895;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018422861.1;locus_tag=NIV78_RS03895;partial=true;product=transposase;pseudo=true;start_range=.,829201;transl_table=11 NZ_CP100136.1 RefSeq gene 830040 830114 . - . ID=gene-NIV78_RS03900;Name=NIV78_RS03900;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS03900 NZ_CP100136.1 tRNAscan-SE tRNA 830040 830114 . - . ID=rna-NIV78_RS03900;Parent=gene-NIV78_RS03900;anticodon=(pos:complement(830079..830081));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS03900;product=tRNA-Gly NZ_CP100136.1 tRNAscan-SE exon 830040 830114 . - . ID=exon-NIV78_RS03900-1;Parent=rna-NIV78_RS03900;anticodon=(pos:complement(830079..830081));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS03900;product=tRNA-Gly NZ_CP100136.1 RefSeq gene 830678 831064 . + . ID=gene-NIV78_RS03905;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=NIV78_RS03905 NZ_CP100136.1 Protein Homology CDS 830678 831064 . + 0 ID=cds-WP_017423043.1;Parent=gene-NIV78_RS03905;Dbxref=Genbank:WP_017423043.1;Name=WP_017423043.1;Ontology_term=GO:0016021;gbkey=CDS;gene=crcB;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522284.1;locus_tag=NIV78_RS03905;product=fluoride efflux transporter CrcB;protein_id=WP_017423043.1;transl_table=11 NZ_CP100136.1 RefSeq gene 831150 831713 . - . ID=gene-NIV78_RS03910;Name=NIV78_RS03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03910 NZ_CP100136.1 Protein Homology CDS 831150 831713 . - 0 ID=cds-WP_012734860.1;Parent=gene-NIV78_RS03910;Dbxref=Genbank:WP_012734860.1;Name=WP_012734860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010116661.1;locus_tag=NIV78_RS03910;product=YggT family protein;protein_id=WP_012734860.1;transl_table=11 NZ_CP100136.1 RefSeq gene 831790 832719 . - . ID=gene-NIV78_RS03915;Name=NIV78_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03915 NZ_CP100136.1 Protein Homology CDS 831790 832719 . - 0 ID=cds-WP_012734861.1;Parent=gene-NIV78_RS03915;Dbxref=Genbank:WP_012734861.1;Name=WP_012734861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696881.1;locus_tag=NIV78_RS03915;product=DUF2520 domain-containing protein;protein_id=WP_012734861.1;transl_table=11 NZ_CP100136.1 RefSeq gene 833147 833449 . + . ID=gene-NIV78_RS03920;Name=NIV78_RS03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03920 NZ_CP100136.1 Protein Homology CDS 833147 833449 . + 0 ID=cds-WP_012734862.1;Parent=gene-NIV78_RS03920;Dbxref=Genbank:WP_012734862.1;Name=WP_012734862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734862.1;locus_tag=NIV78_RS03920;product=hypothetical protein;protein_id=WP_012734862.1;transl_table=11 NZ_CP100136.1 RefSeq gene 833689 835260 . - . ID=gene-NIV78_RS03925;Name=NIV78_RS03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03925 NZ_CP100136.1 Protein Homology CDS 833689 835260 . - 0 ID=cds-WP_017922657.1;Parent=gene-NIV78_RS03925;Dbxref=Genbank:WP_017922657.1;Name=WP_017922657.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734863.1;locus_tag=NIV78_RS03925;product=UbiD family decarboxylase;protein_id=WP_017922657.1;transl_table=11 NZ_CP100136.1 RefSeq gene 835824 836945 . + . ID=gene-NIV78_RS03930;Name=NIV78_RS03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03930 NZ_CP100136.1 Protein Homology CDS 835824 836945 . + 0 ID=cds-WP_012734864.1;Parent=gene-NIV78_RS03930;Dbxref=Genbank:WP_012734864.1;Name=WP_012734864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011852047.1;locus_tag=NIV78_RS03930;product=transglycosylase SLT domain-containing protein;protein_id=WP_012734864.1;transl_table=11 NZ_CP100136.1 RefSeq gene 837043 838254 . - . ID=gene-NIV78_RS03935;Name=NIV78_RS03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03935 NZ_CP100136.1 Protein Homology CDS 837043 838254 . - 0 ID=cds-WP_017922658.1;Parent=gene-NIV78_RS03935;Dbxref=Genbank:WP_017922658.1;Name=WP_017922658.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734865.1;locus_tag=NIV78_RS03935;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_017922658.1;transl_table=11 NZ_CP100136.1 RefSeq gene 838307 838744 . - . ID=gene-NIV78_RS03940;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=NIV78_RS03940 NZ_CP100136.1 Protein Homology CDS 838307 838744 . - 0 ID=cds-WP_012734866.1;Parent=gene-NIV78_RS03940;Dbxref=Genbank:WP_012734866.1;Name=WP_012734866.1;Ontology_term=GO:0006355;gbkey=CDS;gene=nusB;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185707.1;locus_tag=NIV78_RS03940;product=transcription antitermination factor NusB;protein_id=WP_012734866.1;transl_table=11 NZ_CP100136.1 RefSeq gene 838741 839247 . - . ID=gene-NIV78_RS03945;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=NIV78_RS03945 NZ_CP100136.1 Protein Homology CDS 838741 839247 . - 0 ID=cds-WP_017922989.1;Parent=gene-NIV78_RS03945;Dbxref=Genbank:WP_017922989.1;Name=WP_017922989.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012400029.1;locus_tag=NIV78_RS03945;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_017922989.1;transl_table=11 NZ_CP100136.1 RefSeq gene 839313 840440 . - . ID=gene-NIV78_RS03950;Name=ribBA;gbkey=Gene;gene=ribBA;gene_biotype=protein_coding;locus_tag=NIV78_RS03950 NZ_CP100136.1 Protein Homology CDS 839313 840440 . - 0 ID=cds-WP_012734868.1;Parent=gene-NIV78_RS03950;Dbxref=Genbank:WP_012734868.1;Name=WP_012734868.1;Ontology_term=GO:0003935,GO:0008686;gbkey=CDS;gene=ribBA;go_function=GTP cyclohydrolase II activity|0003935||IEA,3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734868.1;locus_tag=NIV78_RS03950;product=bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II;protein_id=WP_012734868.1;transl_table=11 NZ_CP100136.1 RefSeq gene 840642 840854 . - . ID=gene-NIV78_RS03955;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=NIV78_RS03955 NZ_CP100136.1 Protein Homology CDS 840642 840854 . - 0 ID=cds-WP_012734869.1;Parent=gene-NIV78_RS03955;Dbxref=Genbank:WP_012734869.1;Name=WP_012734869.1;Ontology_term=GO:0043953,GO:0016021;gbkey=CDS;gene=tatA;go_component=integral component of membrane|0016021||IEA;go_process=protein transport by the Tat complex|0043953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423039.1;locus_tag=NIV78_RS03955;product=Sec-independent protein translocase subunit TatA;protein_id=WP_012734869.1;transl_table=11 NZ_CP100136.1 RefSeq gene 841202 842458 . + . ID=gene-NIV78_RS03960;Name=NIV78_RS03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03960 NZ_CP100136.1 Protein Homology CDS 841202 842458 . + 0 ID=cds-WP_012734870.1;Parent=gene-NIV78_RS03960;Dbxref=Genbank:WP_012734870.1;Name=WP_012734870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734870.1;locus_tag=NIV78_RS03960;product=cupin domain-containing protein;protein_id=WP_012734870.1;transl_table=11 NZ_CP100136.1 RefSeq gene 842561 843865 . + . ID=gene-NIV78_RS03965;Name=NIV78_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03965 NZ_CP100136.1 Protein Homology CDS 842561 843865 . + 0 ID=cds-WP_017922990.1;Parent=gene-NIV78_RS03965;Dbxref=Genbank:WP_017922990.1;Name=WP_017922990.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696894.1;locus_tag=NIV78_RS03965;product=Nramp family divalent metal transporter;protein_id=WP_017922990.1;transl_table=11 NZ_CP100136.1 RefSeq gene 843752 845035 . - . ID=gene-NIV78_RS03970;Name=NIV78_RS03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03970 NZ_CP100136.1 Protein Homology CDS 843752 845035 . - 0 ID=cds-WP_257757206.1;Parent=gene-NIV78_RS03970;Dbxref=Genbank:WP_257757206.1;Name=WP_257757206.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.2;locus_tag=NIV78_RS03970;product=LysR family transcriptional regulator;protein_id=WP_257757206.1;transl_table=11 NZ_CP100136.1 RefSeq gene 845759 846394 . - . ID=gene-NIV78_RS03975;Name=NIV78_RS03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03975 NZ_CP100136.1 Protein Homology CDS 845759 846394 . - 0 ID=cds-WP_017922992.1;Parent=gene-NIV78_RS03975;Dbxref=Genbank:WP_017922992.1;Name=WP_017922992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424640.1;locus_tag=NIV78_RS03975;product=riboflavin synthase;protein_id=WP_017922992.1;transl_table=11 NZ_CP100136.1 RefSeq gene 846421 847539 . - . ID=gene-NIV78_RS03980;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=NIV78_RS03980 NZ_CP100136.1 Protein Homology CDS 846421 847539 . - 0 ID=cds-WP_017922993.1;Parent=gene-NIV78_RS03980;Dbxref=Genbank:WP_017922993.1;Name=WP_017922993.1;Ontology_term=GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734873.1;locus_tag=NIV78_RS03980;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_017922993.1;transl_table=11 NZ_CP100136.1 RefSeq gene 847558 848841 . - . ID=gene-NIV78_RS03985;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=NIV78_RS03985 NZ_CP100136.1 Protein Homology CDS 847558 848841 . - 0 ID=cds-WP_012734874.1;Parent=gene-NIV78_RS03985;Dbxref=Genbank:WP_012734874.1;Name=WP_012734874.1;Ontology_term=GO:0006779,GO:0042286,GO:0005737;gbkey=CDS;gene=hemL;go_component=cytoplasm|0005737||IEA;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410509.1;locus_tag=NIV78_RS03985;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_012734874.1;transl_table=11 NZ_CP100136.1 RefSeq gene 849016 849471 . - . ID=gene-NIV78_RS03990;Name=NIV78_RS03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03990 NZ_CP100136.1 Protein Homology CDS 849016 849471 . - 0 ID=cds-WP_257757207.1;Parent=gene-NIV78_RS03990;Dbxref=Genbank:WP_257757207.1;Name=WP_257757207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696909.1;locus_tag=NIV78_RS03990;product=hypothetical protein;protein_id=WP_257757207.1;transl_table=11 NZ_CP100136.1 RefSeq gene 849751 850965 . + . ID=gene-NIV78_RS03995;Name=NIV78_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS03995 NZ_CP100136.1 Protein Homology CDS 849751 850965 . + 0 ID=cds-WP_017924481.1;Parent=gene-NIV78_RS03995;Dbxref=Genbank:WP_017924481.1;Name=WP_017924481.1;Ontology_term=GO:0042908,GO:1990961,GO:0042910,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA,xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696910.1;locus_tag=NIV78_RS03995;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=WP_017924481.1;transl_table=11 NZ_CP100136.1 RefSeq gene 851142 853058 . - . ID=gene-NIV78_RS04000;Name=NIV78_RS04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04000 NZ_CP100136.1 Protein Homology CDS 851142 853058 . - 0 ID=cds-WP_012734876.1;Parent=gene-NIV78_RS04000;Dbxref=Genbank:WP_012734876.1;Name=WP_012734876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410513.1;locus_tag=NIV78_RS04000;product=bifunctional transcriptional regulator/glucokinase;protein_id=WP_012734876.1;transl_table=11 NZ_CP100136.1 RefSeq gene 853036 853716 . - . ID=gene-NIV78_RS04005;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=NIV78_RS04005 NZ_CP100136.1 Protein Homology CDS 853036 853716 . - 0 ID=cds-WP_012734877.1;Parent=gene-NIV78_RS04005;Dbxref=Genbank:WP_012734877.1;Name=WP_012734877.1;Ontology_term=GO:0006098,GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600696.1;locus_tag=NIV78_RS04005;product=6-phosphogluconolactonase;protein_id=WP_012734877.1;transl_table=11 NZ_CP100136.1 RefSeq gene 853813 855282 . - . ID=gene-NIV78_RS04010;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=NIV78_RS04010 NZ_CP100136.1 Protein Homology CDS 853813 855282 . - 0 ID=cds-WP_012734878.1;Parent=gene-NIV78_RS04010;Dbxref=Genbank:WP_012734878.1;Name=WP_012734878.1;Ontology_term=GO:0006098,GO:0004345;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213936.1;locus_tag=NIV78_RS04010;product=glucose-6-phosphate dehydrogenase;protein_id=WP_012734878.1;transl_table=11 NZ_CP100136.1 RefSeq gene 855809 857056 . + . ID=gene-NIV78_RS04015;Name=NIV78_RS04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04015 NZ_CP100136.1 Protein Homology CDS 855809 857056 . + 0 ID=cds-WP_257757209.1;Parent=gene-NIV78_RS04015;Dbxref=Genbank:WP_257757209.1;Name=WP_257757209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185848.1;locus_tag=NIV78_RS04015;product=ABC transporter substrate-binding protein;protein_id=WP_257757209.1;transl_table=11 NZ_CP100136.1 RefSeq gene 857196 858137 . + . ID=gene-NIV78_RS04020;Name=NIV78_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04020 NZ_CP100136.1 Protein Homology CDS 857196 858137 . + 0 ID=cds-WP_012734880.1;Parent=gene-NIV78_RS04020;Dbxref=Genbank:WP_012734880.1;Name=WP_012734880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025593.1;locus_tag=NIV78_RS04020;product=sugar ABC transporter permease;protein_id=WP_012734880.1;transl_table=11 NZ_CP100136.1 RefSeq gene 858127 858984 . + . ID=gene-NIV78_RS04025;Name=NIV78_RS04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04025 NZ_CP100136.1 Protein Homology CDS 858127 858984 . + 0 ID=cds-WP_012734881.1;Parent=gene-NIV78_RS04025;Dbxref=Genbank:WP_012734881.1;Name=WP_012734881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764932.1;locus_tag=NIV78_RS04025;product=carbohydrate ABC transporter permease;protein_id=WP_012734881.1;transl_table=11 NZ_CP100136.1 RefSeq gene 859097 860215 . + . ID=gene-NIV78_RS04030;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=NIV78_RS04030 NZ_CP100136.1 Protein Homology CDS 859097 860215 . + 0 ID=cds-WP_012734882.1;Parent=gene-NIV78_RS04030;Dbxref=Genbank:WP_012734882.1;Name=WP_012734882.1;Ontology_term=GO:0005524,GO:0140359;gbkey=CDS;gene=ugpC;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018440516.1;locus_tag=NIV78_RS04030;product=sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC;protein_id=WP_012734882.1;transl_table=11 NZ_CP100136.1 RefSeq gene 860436 861233 . - . ID=gene-NIV78_RS04035;Name=NIV78_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04035 NZ_CP100136.1 Protein Homology CDS 860436 861233 . - 0 ID=cds-WP_169512368.1;Parent=gene-NIV78_RS04035;Dbxref=Genbank:WP_169512368.1;Name=WP_169512368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734883.1;locus_tag=NIV78_RS04035;product=Smr/MutS family protein;protein_id=WP_169512368.1;transl_table=11 NZ_CP100136.1 RefSeq gene 861417 862376 . - . ID=gene-NIV78_RS04040;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=NIV78_RS04040 NZ_CP100136.1 Protein Homology CDS 861417 862376 . - 0 ID=cds-WP_017923090.1;Parent=gene-NIV78_RS04040;Dbxref=Genbank:WP_017923090.1;Name=WP_017923090.1;Ontology_term=GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase activity|0004791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734884.1;locus_tag=NIV78_RS04040;product=thioredoxin-disulfide reductase;protein_id=WP_017923090.1;transl_table=11 NZ_CP100136.1 RefSeq gene 862676 864988 . + . ID=gene-NIV78_RS04045;Name=NIV78_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04045 NZ_CP100136.1 Protein Homology CDS 862676 864988 . + 0 ID=cds-WP_012734885.1;Parent=gene-NIV78_RS04045;Dbxref=Genbank:WP_012734885.1;Name=WP_012734885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186104.1;locus_tag=NIV78_RS04045;product=DNA translocase FtsK;protein_id=WP_012734885.1;transl_table=11 NZ_CP100136.1 RefSeq gene 865049 865750 . + . ID=gene-NIV78_RS04050;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=NIV78_RS04050 NZ_CP100136.1 Protein Homology CDS 865049 865750 . + 0 ID=cds-WP_012734886.1;Parent=gene-NIV78_RS04050;Dbxref=Genbank:WP_012734886.1;Name=WP_012734886.1;gbkey=CDS;gene=lolA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734886.1;locus_tag=NIV78_RS04050;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_012734886.1;transl_table=11 NZ_CP100136.1 RefSeq gene 865962 867272 . + . ID=gene-NIV78_RS04055;Name=NIV78_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04055 NZ_CP100136.1 Protein Homology CDS 865962 867272 . + 0 ID=cds-WP_012734887.1;Parent=gene-NIV78_RS04055;Dbxref=Genbank:WP_012734887.1;Name=WP_012734887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333010.1;locus_tag=NIV78_RS04055;product=replication-associated recombination protein A;protein_id=WP_012734887.1;transl_table=11 NZ_CP100136.1 RefSeq gene 867428 868729 . + . ID=gene-NIV78_RS04060;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=NIV78_RS04060 NZ_CP100136.1 Protein Homology CDS 867428 868729 . + 0 ID=cds-WP_017923091.1;Parent=gene-NIV78_RS04060;Dbxref=Genbank:WP_017923091.1;Name=WP_017923091.1;Ontology_term=GO:0006434,GO:0004828,GO:0005737;gbkey=CDS;gene=serS;go_component=cytoplasm|0005737||IEA;go_function=serine-tRNA ligase activity|0004828||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904317.1;locus_tag=NIV78_RS04060;product=serine--tRNA ligase;protein_id=WP_017923091.1;transl_table=11 NZ_CP100136.1 RefSeq gene 868888 868978 . + . ID=gene-NIV78_RS04065;Name=NIV78_RS04065;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS04065 NZ_CP100136.1 tRNAscan-SE tRNA 868888 868978 . + . ID=rna-NIV78_RS04065;Parent=gene-NIV78_RS04065;anticodon=(pos:868922..868924);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS04065;product=tRNA-Ser NZ_CP100136.1 tRNAscan-SE exon 868888 868978 . + . ID=exon-NIV78_RS04065-1;Parent=rna-NIV78_RS04065;anticodon=(pos:868922..868924);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS04065;product=tRNA-Ser NZ_CP100136.1 RefSeq gene 869418 869639 . - . ID=gene-NIV78_RS04070;Name=NIV78_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04070 NZ_CP100136.1 GeneMarkS-2+ CDS 869418 869639 . - 0 ID=cds-WP_251107572.1;Parent=gene-NIV78_RS04070;Dbxref=Genbank:WP_251107572.1;Name=WP_251107572.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS04070;product=hypothetical protein;protein_id=WP_251107572.1;transl_table=11 NZ_CP100136.1 RefSeq gene 869547 870200 . + . ID=gene-NIV78_RS04075;Name=NIV78_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04075 NZ_CP100136.1 Protein Homology CDS 869547 870200 . + 0 ID=cds-WP_251107562.1;Parent=gene-NIV78_RS04075;Dbxref=Genbank:WP_251107562.1;Name=WP_251107562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476637.1;locus_tag=NIV78_RS04075;product=GNAT family N-acetyltransferase;protein_id=WP_251107562.1;transl_table=11 NZ_CP100136.1 RefSeq gene 870365 871213 . + . ID=gene-NIV78_RS04080;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=NIV78_RS04080 NZ_CP100136.1 Protein Homology CDS 870365 871213 . + 0 ID=cds-WP_257757213.1;Parent=gene-NIV78_RS04080;Dbxref=Genbank:WP_257757213.1;Name=WP_257757213.1;Ontology_term=GO:0000918,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186698.1;locus_tag=NIV78_RS04080;product=septum site-determining protein MinC;protein_id=WP_257757213.1;transl_table=11 NZ_CP100136.1 RefSeq gene 871276 872091 . + . ID=gene-NIV78_RS04085;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=NIV78_RS04085 NZ_CP100136.1 Protein Homology CDS 871276 872091 . + 0 ID=cds-WP_012734891.1;Parent=gene-NIV78_RS04085;Dbxref=Genbank:WP_012734891.1;Name=WP_012734891.1;Ontology_term=GO:0000918,GO:0016887;gbkey=CDS;gene=minD;go_function=ATP hydrolysis activity|0016887||IEA;go_process=division septum site selection|0000918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025606.1;locus_tag=NIV78_RS04085;product=septum site-determining protein MinD;protein_id=WP_012734891.1;transl_table=11 NZ_CP100136.1 RefSeq gene 872104 872358 . + . ID=gene-NIV78_RS04090;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=NIV78_RS04090 NZ_CP100136.1 Protein Homology CDS 872104 872358 . + 0 ID=cds-WP_012734892.1;Parent=gene-NIV78_RS04090;Dbxref=Genbank:WP_012734892.1;Name=WP_012734892.1;gbkey=CDS;gene=minE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004628536.1;locus_tag=NIV78_RS04090;product=cell division topological specificity factor MinE;protein_id=WP_012734892.1;transl_table=11 NZ_CP100136.1 RefSeq gene 872702 873061 . + . ID=gene-NIV78_RS04095;Name=NIV78_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04095 NZ_CP100136.1 Protein Homology CDS 872702 873061 . + 0 ID=cds-WP_017924302.1;Parent=gene-NIV78_RS04095;Dbxref=Genbank:WP_017924302.1;Name=WP_017924302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734893.1;locus_tag=NIV78_RS04095;product=YXWGXW repeat-containing protein;protein_id=WP_017924302.1;transl_table=11 NZ_CP100136.1 RefSeq gene 873203 874834 . - . ID=gene-NIV78_RS04100;Name=NIV78_RS04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04100 NZ_CP100136.1 Protein Homology CDS 873203 874834 . - 0 ID=cds-WP_153477963.1;Parent=gene-NIV78_RS04100;Dbxref=Genbank:WP_153477963.1;Name=WP_153477963.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734895.1;locus_tag=NIV78_RS04100;product=chloride channel protein;protein_id=WP_153477963.1;transl_table=11 NZ_CP100136.1 RefSeq gene 875020 876330 . - . ID=gene-NIV78_RS04105;Name=NIV78_RS04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04105 NZ_CP100136.1 Protein Homology CDS 875020 876330 . - 0 ID=cds-WP_017924157.1;Parent=gene-NIV78_RS04105;Dbxref=Genbank:WP_017924157.1;Name=WP_017924157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734896.1;locus_tag=NIV78_RS04105;product=MHS family MFS transporter;protein_id=WP_017924157.1;transl_table=11 NZ_CP100136.1 RefSeq gene 876798 877295 . - . ID=gene-NIV78_RS04110;Name=NIV78_RS04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04110 NZ_CP100136.1 Protein Homology CDS 876798 877295 . - 0 ID=cds-WP_051071150.1;Parent=gene-NIV78_RS04110;Dbxref=Genbank:WP_051071150.1;Name=WP_051071150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734897.1;locus_tag=NIV78_RS04110;product=energy transducer TonB;protein_id=WP_051071150.1;transl_table=11 NZ_CP100136.1 RefSeq gene 877593 877680 . - . ID=gene-NIV78_RS04115;Name=NIV78_RS04115;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS04115 NZ_CP100136.1 tRNAscan-SE tRNA 877593 877680 . - . ID=rna-NIV78_RS04115;Parent=gene-NIV78_RS04115;anticodon=(pos:complement(877644..877646));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS04115;product=tRNA-Ser NZ_CP100136.1 tRNAscan-SE exon 877593 877680 . - . ID=exon-NIV78_RS04115-1;Parent=rna-NIV78_RS04115;anticodon=(pos:complement(877644..877646));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS04115;product=tRNA-Ser NZ_CP100136.1 RefSeq gene 877735 878955 . - . ID=gene-NIV78_RS04120;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=NIV78_RS04120 NZ_CP100136.1 Protein Homology CDS 877735 878955 . - 0 ID=cds-WP_012734898.1;Parent=gene-NIV78_RS04120;Dbxref=Genbank:WP_012734898.1;Name=WP_012734898.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemW;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734898.1;locus_tag=NIV78_RS04120;product=radical SAM family heme chaperone HemW;protein_id=WP_012734898.1;transl_table=11 NZ_CP100136.1 RefSeq gene 878952 879596 . - . ID=gene-NIV78_RS04125;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;locus_tag=NIV78_RS04125 NZ_CP100136.1 Protein Homology CDS 878952 879596 . - 0 ID=cds-WP_012734899.1;Parent=gene-NIV78_RS04125;Dbxref=Genbank:WP_012734899.1;Name=WP_012734899.1;Ontology_term=GO:0006281,GO:0016462;gbkey=CDS;gene=rdgB;go_function=pyrophosphatase activity|0016462||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734899.1;locus_tag=NIV78_RS04125;product=RdgB/HAM1 family non-canonical purine NTP pyrophosphatase;protein_id=WP_012734899.1;transl_table=11 NZ_CP100136.1 RefSeq gene 879598 880329 . - . ID=gene-NIV78_RS04130;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=NIV78_RS04130 NZ_CP100136.1 Protein Homology CDS 879598 880329 . - 0 ID=cds-WP_012734900.1;Parent=gene-NIV78_RS04130;Dbxref=Genbank:WP_012734900.1;Name=WP_012734900.1;Ontology_term=GO:0008033,GO:0004549;gbkey=CDS;gene=rph;go_function=tRNA-specific ribonuclease activity|0004549||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025617.1;locus_tag=NIV78_RS04130;product=ribonuclease PH;protein_id=WP_012734900.1;transl_table=11 NZ_CP100136.1 RefSeq gene 880554 881477 . + . ID=gene-NIV78_RS04135;Name=NIV78_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04135 NZ_CP100136.1 Protein Homology CDS 880554 881477 . + 0 ID=cds-WP_012734901.1;Parent=gene-NIV78_RS04135;Dbxref=Genbank:WP_012734901.1;Name=WP_012734901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333042.1;locus_tag=NIV78_RS04135;product=YicC family protein;protein_id=WP_012734901.1;transl_table=11 NZ_CP100136.1 RefSeq gene 881484 882158 . + . ID=gene-NIV78_RS04140;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=NIV78_RS04140 NZ_CP100136.1 Protein Homology CDS 881484 882158 . + 0 ID=cds-WP_012734902.1;Parent=gene-NIV78_RS04140;Dbxref=Genbank:WP_012734902.1;Name=WP_012734902.1;Ontology_term=GO:0015949,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486663.1;locus_tag=NIV78_RS04140;product=guanylate kinase;protein_id=WP_012734902.1;transl_table=11 NZ_CP100136.1 RefSeq gene 882218 882421 . + . ID=gene-NIV78_RS04145;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=NIV78_RS04145 NZ_CP100136.1 Protein Homology CDS 882218 882421 . + 0 ID=cds-WP_006999799.1;Parent=gene-NIV78_RS04145;Dbxref=Genbank:WP_006999799.1;Name=WP_006999799.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoZ;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008921215.1;locus_tag=NIV78_RS04145;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_006999799.1;transl_table=11 NZ_CP100136.1 RefSeq gene 882488 884863 . + . ID=gene-NIV78_RS04150;Name=NIV78_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04150 NZ_CP100136.1 Protein Homology CDS 882488 884863 . + 0 ID=cds-WP_012734903.1;Parent=gene-NIV78_RS04150;Dbxref=Genbank:WP_012734903.1;Name=WP_012734903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194871.1;locus_tag=NIV78_RS04150;product=bifunctional (p)ppGpp synthetase/guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=WP_012734903.1;transl_table=11 NZ_CP100136.1 RefSeq gene 884949 885025 . - . ID=gene-NIV78_RS04155;Name=NIV78_RS04155;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS04155 NZ_CP100136.1 tRNAscan-SE tRNA 884949 885025 . - . ID=rna-NIV78_RS04155;Parent=gene-NIV78_RS04155;anticodon=(pos:complement(884989..884991));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS04155;product=tRNA-Arg NZ_CP100136.1 tRNAscan-SE exon 884949 885025 . - . ID=exon-NIV78_RS04155-1;Parent=rna-NIV78_RS04155;anticodon=(pos:complement(884989..884991));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS04155;product=tRNA-Arg NZ_CP100136.1 RefSeq gene 885084 885160 . - . ID=gene-NIV78_RS04160;Name=NIV78_RS04160;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS04160 NZ_CP100136.1 tRNAscan-SE tRNA 885084 885160 . - . ID=rna-NIV78_RS04160;Parent=gene-NIV78_RS04160;anticodon=(pos:complement(885124..885126));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS04160;product=tRNA-Arg NZ_CP100136.1 tRNAscan-SE exon 885084 885160 . - . ID=exon-NIV78_RS04160-1;Parent=rna-NIV78_RS04160;anticodon=(pos:complement(885124..885126));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS04160;product=tRNA-Arg NZ_CP100136.1 RefSeq gene 885275 885835 . + . ID=gene-NIV78_RS04165;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=NIV78_RS04165 NZ_CP100136.1 Protein Homology CDS 885275 885835 . + 0 ID=cds-WP_012734904.1;Parent=gene-NIV78_RS04165;Dbxref=Genbank:WP_012734904.1;Name=WP_012734904.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696954.1;locus_tag=NIV78_RS04165;product=transcription elongation factor GreB;protein_id=WP_012734904.1;transl_table=11 NZ_CP100136.1 RefSeq gene 885963 887114 . - . ID=gene-NIV78_RS04170;Name=NIV78_RS04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04170 NZ_CP100136.1 Protein Homology CDS 885963 887114 . - 0 ID=cds-WP_012734905.1;Parent=gene-NIV78_RS04170;Dbxref=Genbank:WP_012734905.1;Name=WP_012734905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004184655.1;locus_tag=NIV78_RS04170;product=porin;protein_id=WP_012734905.1;transl_table=11 NZ_CP100136.1 RefSeq gene 887667 887924 . - . ID=gene-NIV78_RS04175;Name=NIV78_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04175 NZ_CP100136.1 Protein Homology CDS 887667 887924 . - 0 ID=cds-WP_230674370.1;Parent=gene-NIV78_RS04175;Dbxref=Genbank:WP_230674370.1;Name=WP_230674370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544851.1;locus_tag=NIV78_RS04175;product=hypothetical protein;protein_id=WP_230674370.1;transl_table=11 NZ_CP100136.1 RefSeq gene 888326 888529 . + . ID=gene-NIV78_RS04180;Name=NIV78_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04180 NZ_CP100136.1 Protein Homology CDS 888326 888529 . + 0 ID=cds-WP_012734907.1;Parent=gene-NIV78_RS04180;Dbxref=Genbank:WP_012734907.1;Name=WP_012734907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003230776.1;locus_tag=NIV78_RS04180;product=cold-shock protein;protein_id=WP_012734907.1;transl_table=11 NZ_CP100136.1 RefSeq gene 888647 889792 . + . ID=gene-NIV78_RS04185;Name=NIV78_RS04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04185 NZ_CP100136.1 Protein Homology CDS 888647 889792 . + 0 ID=cds-WP_017922601.1;Parent=gene-NIV78_RS04185;Dbxref=Genbank:WP_017922601.1;Name=WP_017922601.1;Ontology_term=GO:0004527;gbkey=CDS;go_function=exonuclease activity|0004527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423718.1;locus_tag=NIV78_RS04185;product=exonuclease domain-containing protein;protein_id=WP_017922601.1;transl_table=11 NZ_CP100136.1 RefSeq gene 889894 890484 . - . ID=gene-NIV78_RS04190;Name=NIV78_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04190 NZ_CP100136.1 Protein Homology CDS 889894 890484 . - 0 ID=cds-WP_012734909.1;Parent=gene-NIV78_RS04190;Dbxref=Genbank:WP_012734909.1;Name=WP_012734909.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476613.1;locus_tag=NIV78_RS04190;product=chorismate mutase;protein_id=WP_012734909.1;transl_table=11 NZ_CP100136.1 RefSeq gene 890693 890839 . - . ID=gene-NIV78_RS04195;Name=NIV78_RS04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04195 NZ_CP100136.1 Protein Homology CDS 890693 890839 . - 0 ID=cds-WP_012734910.1;Parent=gene-NIV78_RS04195;Dbxref=Genbank:WP_012734910.1;Name=WP_012734910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010105617.1;locus_tag=NIV78_RS04195;product=hypothetical protein;protein_id=WP_012734910.1;transl_table=11 NZ_CP100136.1 RefSeq gene 891198 891449 . - . ID=gene-NIV78_RS04200;Name=NIV78_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04200 NZ_CP100136.1 Protein Homology CDS 891198 891449 . - 0 ID=cds-WP_012734911.1;Parent=gene-NIV78_RS04200;Dbxref=Genbank:WP_012734911.1;Name=WP_012734911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197795.1;locus_tag=NIV78_RS04200;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_012734911.1;transl_table=11 NZ_CP100136.1 RefSeq gene 891751 891826 . - . ID=gene-NIV78_RS04205;Name=NIV78_RS04205;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS04205 NZ_CP100136.1 tRNAscan-SE tRNA 891751 891826 . - . ID=rna-NIV78_RS04205;Parent=gene-NIV78_RS04205;anticodon=(pos:complement(891791..891793));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS04205;product=tRNA-Thr NZ_CP100136.1 tRNAscan-SE exon 891751 891826 . - . ID=exon-NIV78_RS04205-1;Parent=rna-NIV78_RS04205;anticodon=(pos:complement(891791..891793));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS04205;product=tRNA-Thr NZ_CP100136.1 RefSeq gene 892064 893083 . - . ID=gene-NIV78_RS04210;Name=NIV78_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04210 NZ_CP100136.1 Protein Homology CDS 892064 893083 . - 0 ID=cds-WP_012734912.1;Parent=gene-NIV78_RS04210;Dbxref=Genbank:WP_012734912.1;Name=WP_012734912.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734912.1;locus_tag=NIV78_RS04210;product=class 1 fructose-bisphosphatase;protein_id=WP_012734912.1;transl_table=11 NZ_CP100136.1 RefSeq gene 893195 894127 . - . ID=gene-NIV78_RS04215;Name=NIV78_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04215 NZ_CP100136.1 Protein Homology CDS 893195 894127 . - 0 ID=cds-WP_012734913.1;Parent=gene-NIV78_RS04215;Dbxref=Genbank:WP_012734913.1;Name=WP_012734913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189234.1;locus_tag=NIV78_RS04215;product=LysR family transcriptional regulator;protein_id=WP_012734913.1;transl_table=11 NZ_CP100136.1 RefSeq gene 894259 896535 . + . ID=gene-NIV78_RS04220;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=NIV78_RS04220 NZ_CP100136.1 Protein Homology CDS 894259 896535 . + 0 ID=cds-WP_161521332.1;Parent=gene-NIV78_RS04220;Dbxref=Genbank:WP_161521332.1;Name=WP_161521332.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=cellular amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734914.1;locus_tag=NIV78_RS04220;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_161521332.1;transl_table=11 NZ_CP100136.1 RefSeq gene 896647 899349 . - . ID=gene-NIV78_RS04225;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=NIV78_RS04225 NZ_CP100136.1 Protein Homology CDS 896647 899349 . - 0 ID=cds-WP_017923970.1;Parent=gene-NIV78_RS04225;Dbxref=Genbank:WP_017923970.1;Name=WP_017923970.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189239.1;locus_tag=NIV78_RS04225;product=aminopeptidase N;protein_id=WP_017923970.1;transl_table=11 NZ_CP100136.1 RefSeq gene 899564 900274 . + . ID=gene-NIV78_RS04230;Name=NIV78_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04230 NZ_CP100136.1 Protein Homology CDS 899564 900274 . + 0 ID=cds-WP_012734916.1;Parent=gene-NIV78_RS04230;Dbxref=Genbank:WP_012734916.1;Name=WP_012734916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734916.1;locus_tag=NIV78_RS04230;product=DUF4136 domain-containing protein;protein_id=WP_012734916.1;transl_table=11 NZ_CP100136.1 RefSeq gene 900421 901734 . - . ID=gene-NIV78_RS04235;Name=guaD;gbkey=Gene;gene=guaD;gene_biotype=protein_coding;locus_tag=NIV78_RS04235 NZ_CP100136.1 Protein Homology CDS 900421 901734 . - 0 ID=cds-WP_251107269.1;Parent=gene-NIV78_RS04235;Dbxref=Genbank:WP_251107269.1;Name=WP_251107269.1;Ontology_term=GO:0006147,GO:0008892;gbkey=CDS;gene=guaD;go_function=guanine deaminase activity|0008892||IEA;go_process=guanine catabolic process|0006147||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010105570.1;locus_tag=NIV78_RS04235;product=guanine deaminase;protein_id=WP_251107269.1;transl_table=11 NZ_CP100136.1 RefSeq gene 901778 903154 . - . ID=gene-NIV78_RS04240;Name=NIV78_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04240 NZ_CP100136.1 Protein Homology CDS 901778 903154 . - 0 ID=cds-WP_012734918.1;Parent=gene-NIV78_RS04240;Dbxref=Genbank:WP_012734918.1;Name=WP_012734918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004552700.1;locus_tag=NIV78_RS04240;product=NCS2 family permease;protein_id=WP_012734918.1;transl_table=11 NZ_CP100136.1 RefSeq gene 903253 904278 . - . ID=gene-NIV78_RS04245;Name=NIV78_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04245 NZ_CP100136.1 Protein Homology CDS 903253 904278 . - 0 ID=cds-WP_012734919.1;Parent=gene-NIV78_RS04245;Dbxref=Genbank:WP_012734919.1;Name=WP_012734919.1;Ontology_term=GO:0006146,GO:0000034;gbkey=CDS;go_function=adenine deaminase activity|0000034||IEA;go_process=adenine catabolic process|0006146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189005.1;locus_tag=NIV78_RS04245;product=adenosine deaminase;protein_id=WP_012734919.1;transl_table=11 NZ_CP100136.1 RefSeq gene 904296 905318 . - . ID=gene-NIV78_RS04250;Name=xdhC;gbkey=Gene;gene=xdhC;gene_biotype=protein_coding;locus_tag=NIV78_RS04250 NZ_CP100136.1 Protein Homology CDS 904296 905318 . - 0 ID=cds-WP_012734920.1;Parent=gene-NIV78_RS04250;Dbxref=Genbank:WP_012734920.1;Name=WP_012734920.1;Ontology_term=GO:0009115,GO:0065003,GO:0043546;gbkey=CDS;gene=xdhC;go_function=molybdopterin cofactor binding|0043546||IEA;go_process=xanthine catabolic process|0009115||IEA,protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734920.1;locus_tag=NIV78_RS04250;product=xanthine dehydrogenase accessory protein XdhC;protein_id=WP_012734920.1;transl_table=11 NZ_CP100136.1 RefSeq gene 905897 906403 . - . ID=gene-NIV78_RS04255;Name=NIV78_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04255 NZ_CP100136.1 Protein Homology CDS 905897 906403 . - 0 ID=cds-WP_012734921.1;Parent=gene-NIV78_RS04255;Dbxref=Genbank:WP_012734921.1;Name=WP_012734921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656245.1;locus_tag=NIV78_RS04255;product=disulfide bond formation protein B;protein_id=WP_012734921.1;transl_table=11 NZ_CP100136.1 RefSeq gene 906555 907931 . - . ID=gene-NIV78_RS04260;Name=NIV78_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04260 NZ_CP100136.1 Protein Homology CDS 906555 907931 . - 0 ID=cds-WP_251107270.1;Parent=gene-NIV78_RS04260;Dbxref=Genbank:WP_251107270.1;Name=WP_251107270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600517.1;locus_tag=NIV78_RS04260;product=amidase;protein_id=WP_251107270.1;transl_table=11 NZ_CP100136.1 RefSeq gene 908201 909493 . + . ID=gene-NIV78_RS04265;Name=NIV78_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04265 NZ_CP100136.1 Protein Homology CDS 908201 909493 . + 0 ID=cds-WP_012734923.1;Parent=gene-NIV78_RS04265;Dbxref=Genbank:WP_012734923.1;Name=WP_012734923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696972.1;locus_tag=NIV78_RS04265;product=type 1 glutamine amidotransferase;protein_id=WP_012734923.1;transl_table=11 NZ_CP100136.1 RefSeq gene 909630 910445 . + . ID=gene-NIV78_RS04270;Name=NIV78_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04270 NZ_CP100136.1 Protein Homology CDS 909630 910445 . + 0 ID=cds-WP_012734924.1;Parent=gene-NIV78_RS04270;Dbxref=Genbank:WP_012734924.1;Name=WP_012734924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696973.1;locus_tag=NIV78_RS04270;product=DUF2968 domain-containing protein;protein_id=WP_012734924.1;transl_table=11 NZ_CP100136.1 RefSeq gene 910717 912015 . + . ID=gene-NIV78_RS04275;Name=NIV78_RS04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04275 NZ_CP100136.1 Protein Homology CDS 910717 912015 . + 0 ID=cds-WP_012734925.1;Parent=gene-NIV78_RS04275;Dbxref=Genbank:WP_012734925.1;Name=WP_012734925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496552.1;locus_tag=NIV78_RS04275;product=MFS transporter;protein_id=WP_012734925.1;transl_table=11 NZ_CP100136.1 RefSeq gene 912199 914049 . - . ID=gene-NIV78_RS04280;Name=NIV78_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04280 NZ_CP100136.1 Protein Homology CDS 912199 914049 . - 0 ID=cds-WP_012734926.1;Parent=gene-NIV78_RS04280;Dbxref=Genbank:WP_012734926.1;Name=WP_012734926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734926.1;locus_tag=NIV78_RS04280;product=tetratricopeptide repeat protein;protein_id=WP_012734926.1;transl_table=11 NZ_CP100136.1 RefSeq gene 914189 915862 . + . ID=gene-NIV78_RS04285;Name=NIV78_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04285 NZ_CP100136.1 Protein Homology CDS 914189 915862 . + 0 ID=cds-WP_251107271.1;Parent=gene-NIV78_RS04285;Dbxref=Genbank:WP_251107271.1;Name=WP_251107271.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734927.1;locus_tag=NIV78_RS04285;product=FAD-dependent monooxygenase;protein_id=WP_251107271.1;transl_table=11 NZ_CP100136.1 RefSeq gene 915979 916230 . - . ID=gene-NIV78_RS04290;Name=NIV78_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04290 NZ_CP100136.1 Protein Homology CDS 915979 916230 . - 0 ID=cds-WP_012734928.1;Parent=gene-NIV78_RS04290;Dbxref=Genbank:WP_012734928.1;Name=WP_012734928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734928.1;locus_tag=NIV78_RS04290;product=formate dehydrogenase subunit delta;protein_id=WP_012734928.1;transl_table=11 NZ_CP100136.1 RefSeq gene 916244 919198 . - . ID=gene-NIV78_RS04295;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=NIV78_RS04295 NZ_CP100136.1 Protein Homology CDS 916244 919198 . - 0 ID=cds-WP_012734929.1;Parent=gene-NIV78_RS04295;Dbxref=Genbank:WP_012734929.1;Name=WP_012734929.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734929.1;locus_tag=NIV78_RS04295;product=formate dehydrogenase subunit alpha;protein_id=WP_012734929.1;transl_table=11 NZ_CP100136.1 RefSeq gene 919211 920785 . - . ID=gene-NIV78_RS04300;Name=NIV78_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04300 NZ_CP100136.1 Protein Homology CDS 919211 920785 . - 0 ID=cds-WP_012734930.1;Parent=gene-NIV78_RS04300;Dbxref=Genbank:WP_012734930.1;Name=WP_012734930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696979.1;locus_tag=NIV78_RS04300;product=formate dehydrogenase beta subunit;protein_id=WP_012734930.1;transl_table=11 NZ_CP100136.1 RefSeq gene 920782 921270 . - . ID=gene-NIV78_RS04305;Name=NIV78_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04305 NZ_CP100136.1 Protein Homology CDS 920782 921270 . - 0 ID=cds-WP_012734931.1;Parent=gene-NIV78_RS04305;Dbxref=Genbank:WP_012734931.1;Name=WP_012734931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734931.1;locus_tag=NIV78_RS04305;product=NAD(P)H-dependent oxidoreductase subunit E;protein_id=WP_012734931.1;transl_table=11 NZ_CP100136.1 RefSeq gene 921398 922480 . + . ID=gene-NIV78_RS04310;Name=NIV78_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04310 NZ_CP100136.1 Protein Homology CDS 921398 922480 . + 0 ID=cds-WP_012734932.1;Parent=gene-NIV78_RS04310;Dbxref=Genbank:WP_012734932.1;Name=WP_012734932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734932.1;locus_tag=NIV78_RS04310;product=helix-turn-helix transcriptional regulator;protein_id=WP_012734932.1;transl_table=11 NZ_CP100136.1 RefSeq gene 922674 922940 . + . ID=gene-NIV78_RS04315;Name=NIV78_RS04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04315 NZ_CP100136.1 Protein Homology CDS 922674 922940 . + 0 ID=cds-WP_012734933.1;Parent=gene-NIV78_RS04315;Dbxref=Genbank:WP_012734933.1;Name=WP_012734933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734933.1;locus_tag=NIV78_RS04315;product=hypothetical protein;protein_id=WP_012734933.1;transl_table=11 NZ_CP100136.1 RefSeq gene 923169 924053 . - . ID=gene-NIV78_RS04320;Name=NIV78_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04320 NZ_CP100136.1 Protein Homology CDS 923169 924053 . - 0 ID=cds-WP_012734934.1;Parent=gene-NIV78_RS04320;Dbxref=Genbank:WP_012734934.1;Name=WP_012734934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734934.1;locus_tag=NIV78_RS04320;product=LysR family transcriptional regulator;protein_id=WP_012734934.1;transl_table=11 NZ_CP100136.1 RefSeq gene 924131 924907 . + . ID=gene-NIV78_RS04325;Name=NIV78_RS04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04325 NZ_CP100136.1 Protein Homology CDS 924131 924907 . + 0 ID=cds-WP_012734935.1;Parent=gene-NIV78_RS04325;Dbxref=Genbank:WP_012734935.1;Name=WP_012734935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734935.1;locus_tag=NIV78_RS04325;product=MBL fold metallo-hydrolase;protein_id=WP_012734935.1;transl_table=11 NZ_CP100136.1 RefSeq gene 924997 927294 . - . ID=gene-NIV78_RS04330;Name=NIV78_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04330 NZ_CP100136.1 Protein Homology CDS 924997 927294 . - 0 ID=cds-WP_012734936.1;Parent=gene-NIV78_RS04330;Dbxref=Genbank:WP_012734936.1;Name=WP_012734936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734936.1;locus_tag=NIV78_RS04330;product=arginine decarboxylase;protein_id=WP_012734936.1;transl_table=11 NZ_CP100136.1 RefSeq gene 927394 928698 . - . ID=gene-NIV78_RS04335;Name=NIV78_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04335 NZ_CP100136.1 Protein Homology CDS 927394 928698 . - 0 ID=cds-WP_012734937.1;Parent=gene-NIV78_RS04335;Dbxref=Genbank:WP_012734937.1;Name=WP_012734937.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734937.1;locus_tag=NIV78_RS04335;product=amino acid permease;protein_id=WP_012734937.1;transl_table=11 NZ_CP100136.1 RefSeq gene 928643 929848 . + . ID=gene-NIV78_RS04340;Name=NIV78_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04340 NZ_CP100136.1 GeneMarkS-2+ CDS 928643 929848 . + 0 ID=cds-WP_127913968.1;Parent=gene-NIV78_RS04340;Dbxref=Genbank:WP_127913968.1;Name=WP_127913968.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS04340;product=hypothetical protein;protein_id=WP_127913968.1;transl_table=11 NZ_CP100136.1 RefSeq gene 930151 930555 . + . ID=gene-NIV78_RS04345;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=NIV78_RS04345 NZ_CP100136.1 Protein Homology CDS 930151 930555 . + 0 ID=cds-WP_017922213.1;Parent=gene-NIV78_RS04345;Dbxref=Genbank:WP_017922213.1;Name=WP_017922213.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884080.1;locus_tag=NIV78_RS04345;product=aminoacyl-tRNA hydrolase;protein_id=WP_017922213.1;transl_table=11 NZ_CP100136.1 RefSeq gene 930644 930796 . + . ID=gene-NIV78_RS04350;Name=NIV78_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04350 NZ_CP100136.1 GeneMarkS-2+ CDS 930644 930796 . + 0 ID=cds-WP_157384046.1;Parent=gene-NIV78_RS04350;Dbxref=Genbank:WP_157384046.1;Name=WP_157384046.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS04350;product=hypothetical protein;protein_id=WP_157384046.1;transl_table=11 NZ_CP100136.1 RefSeq gene 930858 931295 . - . ID=gene-NIV78_RS04355;Name=NIV78_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04355 NZ_CP100136.1 Protein Homology CDS 930858 931295 . - 0 ID=cds-WP_012734939.1;Parent=gene-NIV78_RS04355;Dbxref=Genbank:WP_012734939.1;Name=WP_012734939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734939.1;locus_tag=NIV78_RS04355;product=RICIN domain-containing protein;protein_id=WP_012734939.1;transl_table=11 NZ_CP100136.1 RefSeq gene 931600 931969 . - . ID=gene-NIV78_RS04360;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=NIV78_RS04360 NZ_CP100136.1 cmsearch tmRNA 931600 931969 . - . ID=rna-NIV78_RS04360;Parent=gene-NIV78_RS04360;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS04360;product=transfer-messenger RNA NZ_CP100136.1 cmsearch exon 931600 931969 . - . ID=exon-NIV78_RS04360-1;Parent=rna-NIV78_RS04360;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS04360;product=transfer-messenger RNA NZ_CP100136.1 RefSeq gene 931982 932695 . - . ID=gene-NIV78_RS04365;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=NIV78_RS04365 NZ_CP100136.1 Protein Homology CDS 931982 932695 . - 0 ID=cds-WP_017922214.1;Parent=gene-NIV78_RS04365;Dbxref=Genbank:WP_017922214.1;Name=WP_017922214.1;Note=PGP is an essential enzyme in the glycolate salvage pathway in higher organisms (photorespiration in plants). Phosphoglycolate results from the oxidase activity of RubisCO in the Calvin cycle when concentrations of carbon dioxide are low relative to oxygen. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (PF00702).;Ontology_term=GO:0008152,GO:0009853,GO:0043094,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=metabolic process|0008152||IEA,photorespiration|0009853||IEA,cellular metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351325.1;locus_tag=NIV78_RS04365;product=phosphoglycolate phosphatase;protein_id=WP_017922214.1;transl_table=11 NZ_CP100136.1 RefSeq gene 932713 933411 . - . ID=gene-NIV78_RS04370;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=NIV78_RS04370 NZ_CP100136.1 Protein Homology CDS 932713 933411 . - 0 ID=cds-WP_012734941.1;Parent=gene-NIV78_RS04370;Dbxref=Genbank:WP_012734941.1;Name=WP_012734941.1;Ontology_term=GO:0006744,GO:0008689;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinone-9 3-O-methyltransferase activity|0008689||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486844.1;locus_tag=NIV78_RS04370;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_012734941.1;transl_table=11 NZ_CP100136.1 RefSeq gene 933564 934220 . - . ID=gene-NIV78_RS04375;Name=NIV78_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04375 NZ_CP100136.1 Protein Homology CDS 933564 934220 . - 0 ID=cds-WP_012734942.1;Parent=gene-NIV78_RS04375;Dbxref=Genbank:WP_012734942.1;Name=WP_012734942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696991.1;locus_tag=NIV78_RS04375;product=OmpA family protein;protein_id=WP_012734942.1;transl_table=11 NZ_CP100136.1 RefSeq gene 934841 937450 . + . ID=gene-NIV78_RS04380;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=NIV78_RS04380 NZ_CP100136.1 Protein Homology CDS 934841 937450 . + 0 ID=cds-WP_012734944.1;Parent=gene-NIV78_RS04380;Dbxref=Genbank:WP_012734944.1;Name=WP_012734944.1;Ontology_term=GO:0006259,GO:0006265,GO:0003677,GO:0003916,GO:0003918,GO:0005524;gbkey=CDS;gene=gyrA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA metabolic process|0006259||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527513.1;locus_tag=NIV78_RS04380;product=DNA gyrase subunit A;protein_id=WP_012734944.1;transl_table=11 NZ_CP100136.1 RefSeq gene 937544 938143 . + . ID=gene-NIV78_RS04385;Name=NIV78_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04385 NZ_CP100136.1 Protein Homology CDS 937544 938143 . + 0 ID=cds-WP_026051649.1;Parent=gene-NIV78_RS04385;Dbxref=Genbank:WP_026051649.1;Name=WP_026051649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009916801.1;locus_tag=NIV78_RS04385;product=DUF2059 domain-containing protein;protein_id=WP_026051649.1;transl_table=11 NZ_CP100136.1 RefSeq gene 938300 939382 . + . ID=gene-NIV78_RS04390;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=NIV78_RS04390 NZ_CP100136.1 Protein Homology CDS 938300 939382 . + 0 ID=cds-WP_012734946.1;Parent=gene-NIV78_RS04390;Dbxref=Genbank:WP_012734946.1;Name=WP_012734946.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476577.1;locus_tag=NIV78_RS04390;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_012734946.1;transl_table=11 NZ_CP100136.1 RefSeq gene 939417 940499 . + . ID=gene-NIV78_RS04395;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=NIV78_RS04395 NZ_CP100136.1 Protein Homology CDS 939417 940499 . + 0 ID=cds-WP_251107274.1;Parent=gene-NIV78_RS04395;Dbxref=Genbank:WP_251107274.1;Name=WP_251107274.1;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;gene=pheA;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328120.1;locus_tag=NIV78_RS04395;product=prephenate dehydratase;protein_id=WP_251107274.1;transl_table=11 NZ_CP100136.1 RefSeq gene 940603 941529 . + . ID=gene-NIV78_RS04400;Name=NIV78_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04400 NZ_CP100136.1 Protein Homology CDS 940603 941529 . + 0 ID=cds-WP_012734948.1;Parent=gene-NIV78_RS04400;Dbxref=Genbank:WP_012734948.1;Name=WP_012734948.1;Ontology_term=GO:0006571,GO:0004665,GO:0008977;gbkey=CDS;go_function=prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696996.1;locus_tag=NIV78_RS04400;product=prephenate dehydrogenase/arogenate dehydrogenase family protein;protein_id=WP_012734948.1;transl_table=11 NZ_CP100136.1 RefSeq gene 941540 942838 . + . ID=gene-NIV78_RS04405;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=NIV78_RS04405 NZ_CP100136.1 Protein Homology CDS 941540 942838 . + 0 ID=cds-WP_017424044.1;Parent=gene-NIV78_RS04405;Dbxref=Genbank:WP_017424044.1;Name=WP_017424044.1;Ontology_term=GO:0009423,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734949.1;locus_tag=NIV78_RS04405;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_017424044.1;transl_table=11 NZ_CP100136.1 RefSeq gene 942852 943538 . + . ID=gene-NIV78_RS04410;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=NIV78_RS04410 NZ_CP100136.1 Protein Homology CDS 942852 943538 . + 0 ID=cds-WP_017922216.1;Parent=gene-NIV78_RS04410;Dbxref=Genbank:WP_017922216.1;Name=WP_017922216.1;Ontology_term=GO:0015949,GO:0004127;gbkey=CDS;gene=cmk;go_function=cytidylate kinase activity|0004127||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189396.1;locus_tag=NIV78_RS04410;product=(d)CMP kinase;protein_id=WP_017922216.1;transl_table=11 NZ_CP100136.1 RefSeq gene 943759 945471 . + . ID=gene-NIV78_RS04415;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=NIV78_RS04415 NZ_CP100136.1 Protein Homology CDS 943759 945471 . + 0 ID=cds-WP_026051520.1;Parent=gene-NIV78_RS04415;Dbxref=Genbank:WP_026051520.1;Name=WP_026051520.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025716.1;locus_tag=NIV78_RS04415;product=30S ribosomal protein S1;protein_id=WP_026051520.1;transl_table=11 NZ_CP100136.1 RefSeq gene 945494 945820 . + . ID=gene-NIV78_RS04420;Name=NIV78_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04420 NZ_CP100136.1 Protein Homology CDS 945494 945820 . + 0 ID=cds-WP_012734952.1;Parent=gene-NIV78_RS04420;Dbxref=Genbank:WP_012734952.1;Name=WP_012734952.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734952.1;locus_tag=NIV78_RS04420;product=integration host factor subunit beta;protein_id=WP_012734952.1;transl_table=11 NZ_CP100136.1 RefSeq gene 946062 946355 . + . ID=gene-NIV78_RS04425;Name=NIV78_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04425 NZ_CP100136.1 Protein Homology CDS 946062 946355 . + 0 ID=cds-WP_012734953.1;Parent=gene-NIV78_RS04425;Dbxref=Genbank:WP_012734953.1;Name=WP_012734953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195986.1;locus_tag=NIV78_RS04425;product=LapA family protein;protein_id=WP_012734953.1;transl_table=11 NZ_CP100136.1 RefSeq gene 946407 947579 . + . ID=gene-NIV78_RS04430;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=NIV78_RS04430 NZ_CP100136.1 Protein Homology CDS 946407 947579 . + 0 ID=cds-WP_012734954.1;Parent=gene-NIV78_RS04430;Dbxref=Genbank:WP_012734954.1;Name=WP_012734954.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734954.1;locus_tag=NIV78_RS04430;product=lipopolysaccharide assembly protein LapB;protein_id=WP_012734954.1;transl_table=11 NZ_CP100136.1 RefSeq gene 947652 949052 . + . ID=gene-NIV78_RS04435;Name=NIV78_RS04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04435 NZ_CP100136.1 Protein Homology CDS 947652 949052 . + 0 ID=cds-WP_017424045.1;Parent=gene-NIV78_RS04435;Dbxref=Genbank:WP_017424045.1;Name=WP_017424045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010105519.1;locus_tag=NIV78_RS04435;product=UDP-glucose/GDP-mannose dehydrogenase family protein;protein_id=WP_017424045.1;transl_table=11 NZ_CP100136.1 RefSeq gene 949021 950001 . + . ID=gene-NIV78_RS04440;Name=rfaE1;gbkey=Gene;gene=rfaE1;gene_biotype=protein_coding;locus_tag=NIV78_RS04440 NZ_CP100136.1 Protein Homology CDS 949021 950001 . + 0 ID=cds-WP_017922220.1;Parent=gene-NIV78_RS04440;Dbxref=Genbank:WP_017922220.1;Name=WP_017922220.1;Ontology_term=GO:0009244,GO:0016773;gbkey=CDS;gene=rfaE1;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734956.1;locus_tag=NIV78_RS04440;product=D-glycero-beta-D-manno-heptose-7-phosphate kinase;protein_id=WP_017922220.1;transl_table=11 NZ_CP100136.1 RefSeq gene 950056 951048 . + . ID=gene-NIV78_RS04445;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=NIV78_RS04445 NZ_CP100136.1 Protein Homology CDS 950056 951048 . + 0 ID=cds-WP_012734957.1;Parent=gene-NIV78_RS04445;Dbxref=Genbank:WP_012734957.1;Name=WP_012734957.1;Ontology_term=GO:0009244,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904403.1;locus_tag=NIV78_RS04445;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_012734957.1;transl_table=11 NZ_CP100136.1 RefSeq gene 951123 951446 . + . ID=gene-NIV78_RS04450;Name=NIV78_RS04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04450 NZ_CP100136.1 Protein Homology CDS 951123 951446 . + 0 ID=cds-WP_012734958.1;Parent=gene-NIV78_RS04450;Dbxref=Genbank:WP_012734958.1;Name=WP_012734958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734958.1;locus_tag=NIV78_RS04450;product=helix-hairpin-helix domain-containing protein;protein_id=WP_012734958.1;transl_table=11 NZ_CP100136.1 RefSeq gene 951499 951645 . - . ID=gene-NIV78_RS04455;Name=NIV78_RS04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04455 NZ_CP100136.1 GeneMarkS-2+ CDS 951499 951645 . - 0 ID=cds-WP_153477922.1;Parent=gene-NIV78_RS04455;Dbxref=Genbank:WP_153477922.1;Name=WP_153477922.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS04455;product=hypothetical protein;protein_id=WP_153477922.1;transl_table=11 NZ_CP100136.1 RefSeq gene 951670 952572 . + . ID=gene-NIV78_RS04460;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=NIV78_RS04460 NZ_CP100136.1 Protein Homology CDS 951670 952572 . + 0 ID=cds-WP_012734959.1;Parent=gene-NIV78_RS04460;Dbxref=Genbank:WP_012734959.1;Name=WP_012734959.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476564.1;locus_tag=NIV78_RS04460;product=cysteine synthase CysM;protein_id=WP_012734959.1;transl_table=11 NZ_CP100136.1 RefSeq gene 952661 953941 . - . ID=gene-NIV78_RS04465;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=NIV78_RS04465 NZ_CP100136.1 Protein Homology CDS 952661 953941 . - 0 ID=cds-WP_012734960.1;Parent=gene-NIV78_RS04465;Dbxref=Genbank:WP_012734960.1;Name=WP_012734960.1;Ontology_term=GO:0009253,GO:0016757;gbkey=CDS;gene=mltB;go_function=glycosyltransferase activity|0016757||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697008.1;locus_tag=NIV78_RS04465;product=lytic murein transglycosylase B;protein_id=WP_012734960.1;transl_table=11 NZ_CP100136.1 RefSeq gene 954119 955042 . + . ID=gene-NIV78_RS04470;Name=NIV78_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04470 NZ_CP100136.1 Protein Homology CDS 954119 955042 . + 0 ID=cds-WP_017922222.1;Parent=gene-NIV78_RS04470;Dbxref=Genbank:WP_017922222.1;Name=WP_017922222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889864.1;locus_tag=NIV78_RS04470;product=histone deacetylase family protein;protein_id=WP_017922222.1;transl_table=11 NZ_CP100136.1 RefSeq gene 955113 955982 . - . ID=gene-NIV78_RS04475;Name=NIV78_RS04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04475 NZ_CP100136.1 Protein Homology CDS 955113 955982 . - 0 ID=cds-WP_251107275.1;Parent=gene-NIV78_RS04475;Dbxref=Genbank:WP_251107275.1;Name=WP_251107275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734962.1;locus_tag=NIV78_RS04475;product=alpha/beta fold hydrolase;protein_id=WP_251107275.1;transl_table=11 NZ_CP100136.1 RefSeq gene 956207 957241 . + . ID=gene-NIV78_RS04480;Name=NIV78_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04480 NZ_CP100136.1 Protein Homology CDS 956207 957241 . + 0 ID=cds-WP_017922224.1;Parent=gene-NIV78_RS04480;Dbxref=Genbank:WP_017922224.1;Name=WP_017922224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889868.1;locus_tag=NIV78_RS04480;product=methionine ABC transporter ATP-binding protein;protein_id=WP_017922224.1;transl_table=11 NZ_CP100136.1 RefSeq gene 957231 957884 . + . ID=gene-NIV78_RS04485;Name=NIV78_RS04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04485 NZ_CP100136.1 Protein Homology CDS 957231 957884 . + 0 ID=cds-WP_012734964.1;Parent=gene-NIV78_RS04485;Dbxref=Genbank:WP_012734964.1;Name=WP_012734964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016345956.1;locus_tag=NIV78_RS04485;product=ABC transporter permease;protein_id=WP_012734964.1;transl_table=11 NZ_CP100136.1 RefSeq gene 957924 958718 . + . ID=gene-NIV78_RS04490;Name=NIV78_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04490 NZ_CP100136.1 Protein Homology CDS 957924 958718 . + 0 ID=cds-WP_017922225.1;Parent=gene-NIV78_RS04490;Dbxref=Genbank:WP_017922225.1;Name=WP_017922225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011402125.1;locus_tag=NIV78_RS04490;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_017922225.1;transl_table=11 NZ_CP100136.1 RefSeq gene 958952 959701 . + . ID=gene-NIV78_RS04495;Name=NIV78_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04495 NZ_CP100136.1 Protein Homology CDS 958952 959701 . + 0 ID=cds-WP_012734966.1;Parent=gene-NIV78_RS04495;Dbxref=Genbank:WP_012734966.1;Name=WP_012734966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189750.1;locus_tag=NIV78_RS04495;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_012734966.1;transl_table=11 NZ_CP100136.1 RefSeq gene 959717 960652 . + . ID=gene-NIV78_RS04500;Name=NIV78_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04500 NZ_CP100136.1 Protein Homology CDS 959717 960652 . + 0 ID=cds-WP_012734967.1;Parent=gene-NIV78_RS04500;Dbxref=Genbank:WP_012734967.1;Name=WP_012734967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189890.1;locus_tag=NIV78_RS04500;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_012734967.1;transl_table=11 NZ_CP100136.1 RefSeq gene 960766 962556 . + . ID=gene-NIV78_RS04505;Name=NIV78_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04505 NZ_CP100136.1 Protein Homology CDS 960766 962556 . + 0 ID=cds-WP_017424078.1;Parent=gene-NIV78_RS04505;Dbxref=Genbank:WP_017424078.1;Name=WP_017424078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904408.1;locus_tag=NIV78_RS04505;product=acyl-CoA dehydrogenase;protein_id=WP_017424078.1;transl_table=11 NZ_CP100136.1 RefSeq gene 962657 963943 . - . ID=gene-NIV78_RS04510;Name=NIV78_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04510 NZ_CP100136.1 Protein Homology CDS 962657 963943 . - 0 ID=cds-WP_012734969.1;Parent=gene-NIV78_RS04510;Dbxref=Genbank:WP_012734969.1;Name=WP_012734969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018433359.1;locus_tag=NIV78_RS04510;product=D-amino acid dehydrogenase;protein_id=WP_012734969.1;transl_table=11 NZ_CP100136.1 RefSeq gene 964091 964579 . + . ID=gene-NIV78_RS04515;Name=NIV78_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04515 NZ_CP100136.1 Protein Homology CDS 964091 964579 . + 0 ID=cds-WP_012734970.1;Parent=gene-NIV78_RS04515;Dbxref=Genbank:WP_012734970.1;Name=WP_012734970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188962.1;locus_tag=NIV78_RS04515;product=Lrp/AsnC ligand binding domain-containing protein;protein_id=WP_012734970.1;transl_table=11 NZ_CP100136.1 RefSeq gene 964689 965846 . + . ID=gene-NIV78_RS04520;Name=NIV78_RS04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04520 NZ_CP100136.1 Protein Homology CDS 964689 965846 . + 0 ID=cds-WP_043224751.1;Parent=gene-NIV78_RS04520;Dbxref=Genbank:WP_043224751.1;Name=WP_043224751.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889883.1;locus_tag=NIV78_RS04520;product=PA0069 family radical SAM protein;protein_id=WP_043224751.1;transl_table=11 NZ_CP100136.1 RefSeq gene 965869 966354 . - . ID=gene-NIV78_RS04525;Name=NIV78_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04525 NZ_CP100136.1 Protein Homology CDS 965869 966354 . - 0 ID=cds-WP_012734972.1;Parent=gene-NIV78_RS04525;Dbxref=Genbank:WP_012734972.1;Name=WP_012734972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734972.1;locus_tag=NIV78_RS04525;product=TM2 domain-containing protein;protein_id=WP_012734972.1;transl_table=11 NZ_CP100136.1 RefSeq gene 966470 967621 . - . ID=gene-NIV78_RS04530;Name=NIV78_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04530 NZ_CP100136.1 Protein Homology CDS 966470 967621 . - 0 ID=cds-WP_012734973.1;Parent=gene-NIV78_RS04530;Dbxref=Genbank:WP_012734973.1;Name=WP_012734973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013340117.1;locus_tag=NIV78_RS04530;product=PQQ-dependent sugar dehydrogenase;protein_id=WP_012734973.1;transl_table=11 NZ_CP100136.1 RefSeq gene 967824 968078 . + . ID=gene-NIV78_RS04535;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=NIV78_RS04535 NZ_CP100136.1 Protein Homology CDS 967824 968078 . + 0 ID=cds-WP_012734974.1;Parent=gene-NIV78_RS04535;Dbxref=Genbank:WP_012734974.1;Name=WP_012734974.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008342343.1;locus_tag=NIV78_RS04535;product=30S ribosomal protein S16;protein_id=WP_012734974.1;transl_table=11 NZ_CP100136.1 RefSeq gene 968122 968835 . + . ID=gene-NIV78_RS04540;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=NIV78_RS04540 NZ_CP100136.1 Protein Homology CDS 968122 968835 . + 0 ID=cds-WP_012734975.1;Parent=gene-NIV78_RS04540;Dbxref=Genbank:WP_012734975.1;Name=WP_012734975.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0003723;gbkey=CDS;gene=rimM;go_function=RNA binding|0003723||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527496.1;locus_tag=NIV78_RS04540;product=ribosome maturation factor RimM;protein_id=WP_012734975.1;transl_table=11 NZ_CP100136.1 RefSeq gene 968837 969634 . + . ID=gene-NIV78_RS04545;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=NIV78_RS04545 NZ_CP100136.1 Protein Homology CDS 968837 969634 . + 0 ID=cds-WP_257757242.1;Parent=gene-NIV78_RS04545;Dbxref=Genbank:WP_257757242.1;Name=WP_257757242.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N(1))-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734976.1;locus_tag=NIV78_RS04545;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_257757242.1;transl_table=11 NZ_CP100136.1 RefSeq gene 969771 970160 . + . ID=gene-NIV78_RS04550;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=NIV78_RS04550 NZ_CP100136.1 Protein Homology CDS 969771 970160 . + 0 ID=cds-WP_012734977.1;Parent=gene-NIV78_RS04550;Dbxref=Genbank:WP_012734977.1;Name=WP_012734977.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734977.1;locus_tag=NIV78_RS04550;product=50S ribosomal protein L19;protein_id=WP_012734977.1;transl_table=11 NZ_CP100136.1 RefSeq gene 970279 970935 . + . ID=gene-NIV78_RS04555;Name=NIV78_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04555 NZ_CP100136.1 Protein Homology CDS 970279 970935 . + 0 ID=cds-WP_232252277.1;Parent=gene-NIV78_RS04555;Dbxref=Genbank:WP_232252277.1;Name=WP_232252277.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,CoA pyrophosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734978.1;locus_tag=NIV78_RS04555;product=CoA pyrophosphatase;protein_id=WP_232252277.1;transl_table=11 NZ_CP100136.1 RefSeq gene 971047 971985 . + . ID=gene-NIV78_RS04560;Name=NIV78_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04560 NZ_CP100136.1 Protein Homology CDS 971047 971985 . + 0 ID=cds-WP_012734979.1;Parent=gene-NIV78_RS04560;Dbxref=Genbank:WP_012734979.1;Name=WP_012734979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213825.1;locus_tag=NIV78_RS04560;product=CobD/CbiB family protein;protein_id=WP_012734979.1;transl_table=11 NZ_CP100136.1 RefSeq gene 972198 972533 . - . ID=gene-NIV78_RS04565;Name=NIV78_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04565 NZ_CP100136.1 Protein Homology CDS 972198 972533 . - 0 ID=cds-WP_251107276.1;Parent=gene-NIV78_RS04565;Dbxref=Genbank:WP_251107276.1;Name=WP_251107276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734980.1;locus_tag=NIV78_RS04565;product=DUF2007 domain-containing protein;protein_id=WP_251107276.1;transl_table=11 NZ_CP100136.1 RefSeq gene 972566 973519 . - . ID=gene-NIV78_RS04570;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=NIV78_RS04570 NZ_CP100136.1 Protein Homology CDS 972566 973519 . - 0 ID=cds-WP_017423462.1;Parent=gene-NIV78_RS04570;Dbxref=Genbank:WP_017423462.1;Name=WP_017423462.1;Ontology_term=GO:0006412,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423462.1;locus_tag=NIV78_RS04570;product=ribosome small subunit-dependent GTPase A;protein_id=WP_017423462.1;transl_table=11 NZ_CP100136.1 RefSeq gene 973516 974775 . - . ID=gene-NIV78_RS04575;Name=NIV78_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04575 NZ_CP100136.1 Protein Homology CDS 973516 974775 . - 0 ID=cds-WP_017923436.1;Parent=gene-NIV78_RS04575;Dbxref=Genbank:WP_017923436.1;Name=WP_017923436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601592.1;locus_tag=NIV78_RS04575;product=M48 family metallopeptidase;protein_id=WP_017923436.1;transl_table=11 NZ_CP100136.1 RefSeq gene 974895 975503 . + . ID=gene-NIV78_RS04580;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=NIV78_RS04580 NZ_CP100136.1 Protein Homology CDS 974895 975503 . + 0 ID=cds-WP_017923437.1;Parent=gene-NIV78_RS04580;Dbxref=Genbank:WP_017923437.1;Name=WP_017923437.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-exoribonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734983.1;locus_tag=NIV78_RS04580;product=oligoribonuclease;protein_id=WP_017923437.1;transl_table=11 NZ_CP100136.1 RefSeq gene 975571 976194 . - . ID=gene-NIV78_RS04585;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=NIV78_RS04585 NZ_CP100136.1 Protein Homology CDS 975571 976194 . - 0 ID=cds-WP_017923438.1;Parent=gene-NIV78_RS04585;Dbxref=Genbank:WP_017923438.1;Name=WP_017923438.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697032.1;locus_tag=NIV78_RS04585;product=molybdopterin adenylyltransferase;protein_id=WP_017923438.1;transl_table=11 NZ_CP100136.1 RefSeq gene 976178 976798 . - . ID=gene-NIV78_RS04590;Name=NIV78_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04590 NZ_CP100136.1 Protein Homology CDS 976178 976798 . - 0 ID=cds-WP_085967305.1;Parent=gene-NIV78_RS04590;Dbxref=Genbank:WP_085967305.1;Name=WP_085967305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883874.1;locus_tag=NIV78_RS04590;product=ribosome-associated protein;protein_id=WP_085967305.1;transl_table=11 NZ_CP100136.1 RefSeq gene 976939 978309 . + . ID=gene-NIV78_RS04595;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=NIV78_RS04595 NZ_CP100136.1 Protein Homology CDS 976939 978309 . + 0 ID=cds-WP_012734986.1;Parent=gene-NIV78_RS04595;Dbxref=Genbank:WP_012734986.1;Name=WP_012734986.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734986.1;locus_tag=NIV78_RS04595;product=metalloprotease PmbA;protein_id=WP_012734986.1;transl_table=11 NZ_CP100136.1 RefSeq gene 978419 978922 . - . ID=gene-NIV78_RS04600;Name=NIV78_RS04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04600 NZ_CP100136.1 Protein Homology CDS 978419 978922 . - 0 ID=cds-WP_012734987.1;Parent=gene-NIV78_RS04600;Dbxref=Genbank:WP_012734987.1;Name=WP_012734987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734987.1;locus_tag=NIV78_RS04600;product=dihydrofolate reductase;protein_id=WP_012734987.1;transl_table=11 NZ_CP100136.1 RefSeq gene 979158 980129 . + . ID=gene-NIV78_RS04605;Name=NIV78_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04605 NZ_CP100136.1 Protein Homology CDS 979158 980129 . + 0 ID=cds-WP_012734988.1;Parent=gene-NIV78_RS04605;Dbxref=Genbank:WP_012734988.1;Name=WP_012734988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400684.1;locus_tag=NIV78_RS04605;product=thymidylate synthase;protein_id=WP_012734988.1;transl_table=11 NZ_CP100136.1 RefSeq gene 980268 982712 . - . ID=gene-NIV78_RS04610;Name=NIV78_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04610 NZ_CP100136.1 Protein Homology CDS 980268 982712 . - 0 ID=cds-WP_251107277.1;Parent=gene-NIV78_RS04610;Dbxref=Genbank:WP_251107277.1;Name=WP_251107277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734989.1;locus_tag=NIV78_RS04610;product=FecR domain-containing protein;protein_id=WP_251107277.1;transl_table=11 NZ_CP100136.1 RefSeq gene 982872 983582 . - . ID=gene-NIV78_RS04615;Name=NIV78_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04615 NZ_CP100136.1 Protein Homology CDS 982872 983582 . - 0 ID=cds-WP_012734990.1;Parent=gene-NIV78_RS04615;Dbxref=Genbank:WP_012734990.1;Name=WP_012734990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004550132.1;locus_tag=NIV78_RS04615;product=winged helix-turn-helix domain-containing protein;protein_id=WP_012734990.1;transl_table=11 NZ_CP100136.1 RefSeq gene 983728 983880 . + . ID=gene-NIV78_RS04620;Name=NIV78_RS04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04620 NZ_CP100136.1 Protein Homology CDS 983728 983880 . + 0 ID=cds-WP_012734991.1;Parent=gene-NIV78_RS04620;Dbxref=Genbank:WP_012734991.1;Name=WP_012734991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734991.1;locus_tag=NIV78_RS04620;product=hypothetical protein;protein_id=WP_012734991.1;transl_table=11 NZ_CP100136.1 RefSeq gene 983994 984503 . + . ID=gene-NIV78_RS04625;Name=NIV78_RS04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04625 NZ_CP100136.1 Protein Homology CDS 983994 984503 . + 0 ID=cds-WP_012734992.1;Parent=gene-NIV78_RS04625;Dbxref=Genbank:WP_012734992.1;Name=WP_012734992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010105411.1;locus_tag=NIV78_RS04625;product=acyl-CoA thioesterase;protein_id=WP_012734992.1;transl_table=11 NZ_CP100136.1 RefSeq gene 984625 986019 . - . ID=gene-NIV78_RS04630;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=NIV78_RS04630 NZ_CP100136.1 Protein Homology CDS 984625 986019 . - 0 ID=cds-WP_017923404.1;Parent=gene-NIV78_RS04630;Dbxref=Genbank:WP_017923404.1;Name=WP_017923404.1;Ontology_term=GO:0006099,GO:0004333;gbkey=CDS;gene=fumC;go_function=fumarate hydratase activity|0004333||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734993.1;locus_tag=NIV78_RS04630;product=class II fumarate hydratase;protein_id=WP_017923404.1;transl_table=11 NZ_CP100136.1 RefSeq gene 986170 987552 . - . ID=gene-NIV78_RS04635;Name=NIV78_RS04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04635 NZ_CP100136.1 Protein Homology CDS 986170 987552 . - 0 ID=cds-WP_012734994.1;Parent=gene-NIV78_RS04635;Dbxref=Genbank:WP_012734994.1;Name=WP_012734994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734994.1;locus_tag=NIV78_RS04635;product=MATE family efflux transporter;protein_id=WP_012734994.1;transl_table=11 NZ_CP100136.1 RefSeq gene 987716 987934 . - . ID=gene-NIV78_RS04640;Name=NIV78_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04640 NZ_CP100136.1 Protein Homology CDS 987716 987934 . - 0 ID=cds-WP_012734995.1;Parent=gene-NIV78_RS04640;Dbxref=Genbank:WP_012734995.1;Name=WP_012734995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753074.1;locus_tag=NIV78_RS04640;product=RNA-binding S4 domain-containing protein;protein_id=WP_012734995.1;transl_table=11 NZ_CP100136.1 RefSeq gene 987927 988334 . + . ID=gene-NIV78_RS04645;Name=NIV78_RS04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04645 NZ_CP100136.1 GeneMarkS-2+ CDS 987927 988334 . + 0 ID=cds-WP_257757244.1;Parent=gene-NIV78_RS04645;Dbxref=Genbank:WP_257757244.1;Name=WP_257757244.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS04645;product=hypothetical protein;protein_id=WP_257757244.1;transl_table=11 NZ_CP100136.1 RefSeq gene 988425 988793 . + . ID=gene-NIV78_RS04650;Name=NIV78_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04650 NZ_CP100136.1 Protein Homology CDS 988425 988793 . + 0 ID=cds-WP_251107280.1;Parent=gene-NIV78_RS04650;Dbxref=Genbank:WP_251107280.1;Name=WP_251107280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007176501.1;locus_tag=NIV78_RS04650;product=hypothetical protein;protein_id=WP_251107280.1;transl_table=11 NZ_CP100136.1 RefSeq gene 988903 989685 . - . ID=gene-NIV78_RS04655;Name=NIV78_RS04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04655 NZ_CP100136.1 Protein Homology CDS 988903 989685 . - 0 ID=cds-WP_012734996.1;Parent=gene-NIV78_RS04655;Dbxref=Genbank:WP_012734996.1;Name=WP_012734996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734996.1;locus_tag=NIV78_RS04655;product=DUF4088 family protein;protein_id=WP_012734996.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 989819 989956 . - . ID=gene-NIV78_RS04660;Name=NIV78_RS04660;end_range=989956,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS04660;partial=true;pseudo=true;start_range=.,989819 NZ_CP100136.1 Protein Homology CDS 989819 989956 . - 0 ID=cds-NIV78_RS04660;Parent=gene-NIV78_RS04660;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=989956,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897682.1;locus_tag=NIV78_RS04660;partial=true;product=AzlD domain-containing protein;pseudo=true;start_range=.,989819;transl_table=11 NZ_CP100136.1 RefSeq gene 989988 990464 . - . ID=gene-NIV78_RS04665;Name=NIV78_RS04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04665 NZ_CP100136.1 Protein Homology CDS 989988 990464 . - 0 ID=cds-WP_012734997.1;Parent=gene-NIV78_RS04665;Dbxref=Genbank:WP_012734997.1;Name=WP_012734997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011832346.1;locus_tag=NIV78_RS04665;product=CreA family protein;protein_id=WP_012734997.1;transl_table=11 NZ_CP100136.1 RefSeq gene 990664 990739 . - . ID=gene-NIV78_RS04670;Name=NIV78_RS04670;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS04670 NZ_CP100136.1 tRNAscan-SE tRNA 990664 990739 . - . ID=rna-NIV78_RS04670;Parent=gene-NIV78_RS04670;anticodon=(pos:complement(990704..990706));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS04670;product=tRNA-Asn NZ_CP100136.1 tRNAscan-SE exon 990664 990739 . - . ID=exon-NIV78_RS04670-1;Parent=rna-NIV78_RS04670;anticodon=(pos:complement(990704..990706));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS04670;product=tRNA-Asn NZ_CP100136.1 RefSeq gene 990808 990883 . - . ID=gene-NIV78_RS04675;Name=NIV78_RS04675;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS04675 NZ_CP100136.1 tRNAscan-SE tRNA 990808 990883 . - . ID=rna-NIV78_RS04675;Parent=gene-NIV78_RS04675;anticodon=(pos:complement(990848..990850));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS04675;product=tRNA-Asn NZ_CP100136.1 tRNAscan-SE exon 990808 990883 . - . ID=exon-NIV78_RS04675-1;Parent=rna-NIV78_RS04675;anticodon=(pos:complement(990848..990850));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS04675;product=tRNA-Asn NZ_CP100136.1 RefSeq gene 990990 991313 . - . ID=gene-NIV78_RS04680;Name=NIV78_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04680 NZ_CP100136.1 Protein Homology CDS 990990 991313 . - 0 ID=cds-WP_012734998.1;Parent=gene-NIV78_RS04680;Dbxref=Genbank:WP_012734998.1;Name=WP_012734998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697054.1;locus_tag=NIV78_RS04680;product=ferredoxin family protein;protein_id=WP_012734998.1;transl_table=11 NZ_CP100136.1 RefSeq gene 991596 992795 . + . ID=gene-NIV78_RS04685;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=NIV78_RS04685 NZ_CP100136.1 Protein Homology CDS 991596 992795 . + 0 ID=cds-WP_017425489.1;Parent=gene-NIV78_RS04685;Dbxref=Genbank:WP_017425489.1;Name=WP_017425489.1;Ontology_term=GO:0019358,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=nicotinate nucleotide salvage|0019358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656325.1;locus_tag=NIV78_RS04685;product=nicotinate phosphoribosyltransferase;protein_id=WP_017425489.1;transl_table=11 NZ_CP100136.1 RefSeq gene 992902 993573 . + . ID=gene-NIV78_RS04690;Name=NIV78_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04690 NZ_CP100136.1 Protein Homology CDS 992902 993573 . + 0 ID=cds-WP_012735000.1;Parent=gene-NIV78_RS04690;Dbxref=Genbank:WP_012735000.1;Name=WP_012735000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363387.1;locus_tag=NIV78_RS04690;product=lactate utilization protein C;protein_id=WP_012735000.1;transl_table=11 NZ_CP100136.1 RefSeq gene 993570 995177 . + . ID=gene-NIV78_RS04695;Name=NIV78_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04695 NZ_CP100136.1 Protein Homology CDS 993570 995177 . + 0 ID=cds-WP_232734518.1;Parent=gene-NIV78_RS04695;Dbxref=Genbank:WP_232734518.1;Name=WP_232734518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735001.1;locus_tag=NIV78_RS04695;product=sodium:proton antiporter;protein_id=WP_232734518.1;transl_table=11 NZ_CP100136.1 RefSeq gene 995275 996264 . + . ID=gene-NIV78_RS04700;Name=NIV78_RS04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04700 NZ_CP100136.1 Protein Homology CDS 995275 996264 . + 0 ID=cds-WP_012735002.1;Parent=gene-NIV78_RS04700;Dbxref=Genbank:WP_012735002.1;Name=WP_012735002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544923.1;locus_tag=NIV78_RS04700;product=D-glycerate dehydrogenase;protein_id=WP_012735002.1;transl_table=11 NZ_CP100136.1 RefSeq gene 996261 997730 . + . ID=gene-NIV78_RS04705;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=NIV78_RS04705 NZ_CP100136.1 Protein Homology CDS 996261 997730 . + 0 ID=cds-WP_251107281.1;Parent=gene-NIV78_RS04705;Dbxref=Genbank:WP_251107281.1;Name=WP_251107281.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735003.1;locus_tag=NIV78_RS04705;product=DNA recombination protein RmuC;protein_id=WP_251107281.1;transl_table=11 NZ_CP100136.1 RefSeq gene 997833 998327 . - . ID=gene-NIV78_RS04710;Name=NIV78_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04710 NZ_CP100136.1 Protein Homology CDS 997833 998327 . - 0 ID=cds-WP_012735004.1;Parent=gene-NIV78_RS04710;Dbxref=Genbank:WP_012735004.1;Name=WP_012735004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735004.1;locus_tag=NIV78_RS04710;product=GNAT family N-acetyltransferase;protein_id=WP_012735004.1;transl_table=11 NZ_CP100136.1 RefSeq gene 998324 998599 . - . ID=gene-NIV78_RS04715;Name=NIV78_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04715 NZ_CP100136.1 Protein Homology CDS 998324 998599 . - 0 ID=cds-WP_012735005.1;Parent=gene-NIV78_RS04715;Dbxref=Genbank:WP_012735005.1;Name=WP_012735005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192965.1;locus_tag=NIV78_RS04715;product=hypothetical protein;protein_id=WP_012735005.1;transl_table=11 NZ_CP100136.1 RefSeq gene 998638 999903 . - . ID=gene-NIV78_RS04720;Name=NIV78_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04720 NZ_CP100136.1 Protein Homology CDS 998638 999903 . - 0 ID=cds-WP_100555790.1;Parent=gene-NIV78_RS04720;Dbxref=Genbank:WP_100555790.1;Name=WP_100555790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735006.1;locus_tag=NIV78_RS04720;product=molybdopterin molybdotransferase MoeA;protein_id=WP_100555790.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1000022 1000663 . - . ID=gene-NIV78_RS04725;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=NIV78_RS04725 NZ_CP100136.1 Protein Homology CDS 1000022 1000663 . - 0 ID=cds-WP_012735007.1;Parent=gene-NIV78_RS04725;Dbxref=Genbank:WP_012735007.1;Name=WP_012735007.1;gbkey=CDS;gene=mobA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735007.1;locus_tag=NIV78_RS04725;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_012735007.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1000679 1001791 . - . ID=gene-NIV78_RS04730;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=NIV78_RS04730 NZ_CP100136.1 Protein Homology CDS 1000679 1001791 . - 0 ID=cds-WP_012735008.1;Parent=gene-NIV78_RS04730;Dbxref=Genbank:WP_012735008.1;Name=WP_012735008.1;Ontology_term=GO:0006777,GO:0051539;gbkey=CDS;gene=moaA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213801.1;locus_tag=NIV78_RS04730;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_012735008.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1002049 1005426 . - . ID=gene-NIV78_RS04735;Name=NIV78_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04735 NZ_CP100136.1 Protein Homology CDS 1002049 1005426 . - 0 ID=cds-WP_100555789.1;Parent=gene-NIV78_RS04735;Dbxref=Genbank:WP_100555789.1;Name=WP_100555789.1;Ontology_term=GO:0006401,GO:0004540;gbkey=CDS;go_function=ribonuclease activity|0004540||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527470.1;locus_tag=NIV78_RS04735;product=Rne/Rng family ribonuclease;protein_id=WP_100555789.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1006149 1007153 . + . ID=gene-NIV78_RS04740;Name=NIV78_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04740 NZ_CP100136.1 Protein Homology CDS 1006149 1007153 . + 0 ID=cds-WP_026051662.1;Parent=gene-NIV78_RS04740;Dbxref=Genbank:WP_026051662.1;Name=WP_026051662.1;Ontology_term=GO:0001522,GO:0009451,GO:0009982;gbkey=CDS;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697066.1;locus_tag=NIV78_RS04740;product=RluA family pseudouridine synthase;protein_id=WP_026051662.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1007159 1007818 . + . ID=gene-NIV78_RS04745;Name=NIV78_RS04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04745 NZ_CP100136.1 Protein Homology CDS 1007159 1007818 . + 0 ID=cds-WP_012735011.1;Parent=gene-NIV78_RS04745;Dbxref=Genbank:WP_012735011.1;Name=WP_012735011.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904464.1;locus_tag=NIV78_RS04745;product=HAD-IA family hydrolase;protein_id=WP_012735011.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1007815 1008198 . + . ID=gene-NIV78_RS04750;Name=NIV78_RS04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04750 NZ_CP100136.1 Protein Homology CDS 1007815 1008198 . + 0 ID=cds-WP_012735012.1;Parent=gene-NIV78_RS04750;Dbxref=Genbank:WP_012735012.1;Name=WP_012735012.1;Ontology_term=GO:0051537;gbkey=CDS;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735012.1;locus_tag=NIV78_RS04750;product=Rieske 2Fe-2S domain-containing protein;protein_id=WP_012735012.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1008241 1009233 . + . ID=gene-NIV78_RS04755;Name=NIV78_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04755 NZ_CP100136.1 Protein Homology CDS 1008241 1009233 . + 0 ID=cds-WP_012735013.1;Parent=gene-NIV78_RS04755;Dbxref=Genbank:WP_012735013.1;Name=WP_012735013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004554228.1;locus_tag=NIV78_RS04755;product=S49 family peptidase;protein_id=WP_012735013.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1009297 1010019 . - . ID=gene-NIV78_RS04760;Name=NIV78_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04760 NZ_CP100136.1 Protein Homology CDS 1009297 1010019 . - 0 ID=cds-WP_012735014.1;Parent=gene-NIV78_RS04760;Dbxref=Genbank:WP_012735014.1;Name=WP_012735014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883942.1;locus_tag=NIV78_RS04760;product=SAM-dependent methyltransferase;protein_id=WP_012735014.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1010016 1010639 . - . ID=gene-NIV78_RS04765;Name=NIV78_RS04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04765 NZ_CP100136.1 Protein Homology CDS 1010016 1010639 . - 0 ID=cds-WP_017922701.1;Parent=gene-NIV78_RS04765;Dbxref=Genbank:WP_017922701.1;Name=WP_017922701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735015.1;locus_tag=NIV78_RS04765;product=Maf-like protein;protein_id=WP_017922701.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1010924 1011568 . + . ID=gene-NIV78_RS04770;Name=NIV78_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04770 NZ_CP100136.1 Protein Homology CDS 1010924 1011568 . + 0 ID=cds-WP_012735016.1;Parent=gene-NIV78_RS04770;Dbxref=Genbank:WP_012735016.1;Name=WP_012735016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889985.1;locus_tag=NIV78_RS04770;product=DUF177 domain-containing protein;protein_id=WP_012735016.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1011669 1011848 . + . ID=gene-NIV78_RS04775;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=NIV78_RS04775 NZ_CP100136.1 Protein Homology CDS 1011669 1011848 . + 0 ID=cds-WP_012735017.1;Parent=gene-NIV78_RS04775;Dbxref=Genbank:WP_012735017.1;Name=WP_012735017.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmF;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889986.1;locus_tag=NIV78_RS04775;product=50S ribosomal protein L32;protein_id=WP_012735017.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1011985 1013091 . + . ID=gene-NIV78_RS04780;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=NIV78_RS04780 NZ_CP100136.1 Protein Homology CDS 1011985 1013091 . + 0 ID=cds-WP_012735018.1;Parent=gene-NIV78_RS04780;Dbxref=Genbank:WP_012735018.1;Name=WP_012735018.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764798.1;locus_tag=NIV78_RS04780;product=phosphate acyltransferase PlsX;protein_id=WP_012735018.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1013092 1014081 . + . ID=gene-NIV78_RS04785;Name=NIV78_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04785 NZ_CP100136.1 Protein Homology CDS 1013092 1014081 . + 0 ID=cds-WP_012735019.1;Parent=gene-NIV78_RS04785;Dbxref=Genbank:WP_012735019.1;Name=WP_012735019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010105339.1;locus_tag=NIV78_RS04785;product=ketoacyl-ACP synthase III;protein_id=WP_012735019.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1014154 1015086 . + . ID=gene-NIV78_RS04790;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=NIV78_RS04790 NZ_CP100136.1 Protein Homology CDS 1014154 1015086 . + 0 ID=cds-WP_017423169.1;Parent=gene-NIV78_RS04790;Dbxref=Genbank:WP_017423169.1;Name=WP_017423169.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025800.1;locus_tag=NIV78_RS04790;product=ACP S-malonyltransferase;protein_id=WP_017423169.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1015131 1015880 . + . ID=gene-NIV78_RS04795;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=NIV78_RS04795 NZ_CP100136.1 Protein Homology CDS 1015131 1015880 . + 0 ID=cds-WP_012735021.1;Parent=gene-NIV78_RS04795;Dbxref=Genbank:WP_012735021.1;Name=WP_012735021.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192016.1;locus_tag=NIV78_RS04795;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_012735021.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1016030 1016269 . + . ID=gene-NIV78_RS04800;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=NIV78_RS04800 NZ_CP100136.1 Protein Homology CDS 1016030 1016269 . + 0 ID=cds-WP_012735022.1;Parent=gene-NIV78_RS04800;Dbxref=Genbank:WP_012735022.1;Name=WP_012735022.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735022.1;locus_tag=NIV78_RS04800;product=acyl carrier protein;protein_id=WP_012735022.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1016433 1017671 . + . ID=gene-NIV78_RS04805;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=NIV78_RS04805 NZ_CP100136.1 Protein Homology CDS 1016433 1017671 . + 0 ID=cds-WP_012735023.1;Parent=gene-NIV78_RS04805;Dbxref=Genbank:WP_012735023.1;Name=WP_012735023.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009913173.1;locus_tag=NIV78_RS04805;product=beta-ketoacyl-ACP synthase II;protein_id=WP_012735023.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1017683 1018153 . + . ID=gene-NIV78_RS04810;Name=NIV78_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04810 NZ_CP100136.1 Protein Homology CDS 1017683 1018153 . + 0 ID=cds-WP_012735024.1;Parent=gene-NIV78_RS04810;Dbxref=Genbank:WP_012735024.1;Name=WP_012735024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735024.1;locus_tag=NIV78_RS04810;product=hypothetical protein;protein_id=WP_012735024.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1018248 1018847 . + . ID=gene-NIV78_RS04815;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=NIV78_RS04815 NZ_CP100136.1 Protein Homology CDS 1018248 1018847 . + 0 ID=cds-WP_012735025.1;Parent=gene-NIV78_RS04815;Dbxref=Genbank:WP_012735025.1;Name=WP_012735025.1;Ontology_term=GO:0006352,GO:0006979,GO:0016987,GO:0005737;gbkey=CDS;gene=rpoE;go_component=cytoplasm|0005737||IEA;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883961.1;locus_tag=NIV78_RS04815;product=RNA polymerase sigma factor RpoE;protein_id=WP_012735025.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1018934 1019545 . + . ID=gene-NIV78_RS04820;Name=NIV78_RS04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04820 NZ_CP100136.1 Protein Homology CDS 1018934 1019545 . + 0 ID=cds-WP_012735026.1;Parent=gene-NIV78_RS04820;Dbxref=Genbank:WP_012735026.1;Name=WP_012735026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004524614.1;locus_tag=NIV78_RS04820;product=sigma-E factor negative regulatory protein;protein_id=WP_012735026.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1019551 1020603 . + . ID=gene-NIV78_RS04825;Name=NIV78_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04825 NZ_CP100136.1 Protein Homology CDS 1019551 1020603 . + 0 ID=cds-WP_012735027.1;Parent=gene-NIV78_RS04825;Dbxref=Genbank:WP_012735027.1;Name=WP_012735027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192760.1;locus_tag=NIV78_RS04825;product=MucB/RseB C-terminal domain-containing protein;protein_id=WP_012735027.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1020621 1022159 . + . ID=gene-NIV78_RS04830;Name=NIV78_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04830 NZ_CP100136.1 Protein Homology CDS 1020621 1022159 . + 0 ID=cds-WP_017423576.1;Parent=gene-NIV78_RS04830;Dbxref=Genbank:WP_017423576.1;Name=WP_017423576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009921555.1;locus_tag=NIV78_RS04830;product=DegQ family serine endoprotease;protein_id=WP_017423576.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1022167 1022412 . + . ID=gene-NIV78_RS04835;Name=NIV78_RS04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04835 NZ_CP100136.1 Protein Homology CDS 1022167 1022412 . + 0 ID=cds-WP_017423575.1;Parent=gene-NIV78_RS04835;Dbxref=Genbank:WP_017423575.1;Name=WP_017423575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735029.1;locus_tag=NIV78_RS04835;product=glutaredoxin family protein;protein_id=WP_017423575.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1022615 1024408 . + . ID=gene-NIV78_RS04840;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=NIV78_RS04840 NZ_CP100136.1 Protein Homology CDS 1022615 1024408 . + 0 ID=cds-WP_017923375.1;Parent=gene-NIV78_RS04840;Dbxref=Genbank:WP_017923375.1;Name=WP_017923375.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897649.1;locus_tag=NIV78_RS04840;product=translation elongation factor 4;protein_id=WP_017923375.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1024425 1025321 . + . ID=gene-NIV78_RS04845;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=NIV78_RS04845 NZ_CP100136.1 Protein Homology CDS 1024425 1025321 . + 0 ID=cds-WP_012735031.1;Parent=gene-NIV78_RS04845;Dbxref=Genbank:WP_012735031.1;Name=WP_012735031.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890017.1;locus_tag=NIV78_RS04845;product=signal peptidase I;protein_id=WP_012735031.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1025466 1026755 . + . ID=gene-NIV78_RS04850;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=NIV78_RS04850 NZ_CP100136.1 Protein Homology CDS 1025466 1026755 . + 0 ID=cds-WP_017423574.1;Parent=gene-NIV78_RS04850;Dbxref=Genbank:WP_017423574.1;Name=WP_017423574.1;Ontology_term=GO:0006396,GO:0004525;gbkey=CDS;gene=rnc;go_function=ribonuclease III activity|0004525||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735032.1;locus_tag=NIV78_RS04850;product=ribonuclease III;protein_id=WP_017423574.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1026816 1027715 . + . ID=gene-NIV78_RS04855;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=NIV78_RS04855 NZ_CP100136.1 Protein Homology CDS 1026816 1027715 . + 0 ID=cds-WP_017423573.1;Parent=gene-NIV78_RS04855;Dbxref=Genbank:WP_017423573.1;Name=WP_017423573.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009913163.1;locus_tag=NIV78_RS04855;product=GTPase Era;protein_id=WP_017423573.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1027702 1028547 . + . ID=gene-NIV78_RS04860;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=NIV78_RS04860 NZ_CP100136.1 Protein Homology CDS 1027702 1028547 . + 0 ID=cds-WP_012735034.1;Parent=gene-NIV78_RS04860;Dbxref=Genbank:WP_012735034.1;Name=WP_012735034.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532089.1;locus_tag=NIV78_RS04860;product=DNA repair protein RecO;protein_id=WP_012735034.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1028544 1029317 . + . ID=gene-NIV78_RS04865;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=NIV78_RS04865 NZ_CP100136.1 Protein Homology CDS 1028544 1029317 . + 0 ID=cds-WP_012735035.1;Parent=gene-NIV78_RS04865;Dbxref=Genbank:WP_012735035.1;Name=WP_012735035.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010105322.1;locus_tag=NIV78_RS04865;product=pyridoxine 5'-phosphate synthase;protein_id=WP_012735035.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1029328 1029750 . + . ID=gene-NIV78_RS04870;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=NIV78_RS04870 NZ_CP100136.1 Protein Homology CDS 1029328 1029750 . + 0 ID=cds-WP_012735036.1;Parent=gene-NIV78_RS04870;Dbxref=Genbank:WP_012735036.1;Name=WP_012735036.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735036.1;locus_tag=NIV78_RS04870;product=holo-ACP synthase;protein_id=WP_012735036.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1029793 1030821 . + . ID=gene-NIV78_RS04875;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=NIV78_RS04875 NZ_CP100136.1 Protein Homology CDS 1029793 1030821 . + 0 ID=cds-WP_012735037.1;Parent=gene-NIV78_RS04875;Dbxref=Genbank:WP_012735037.1;Name=WP_012735037.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735037.1;locus_tag=NIV78_RS04875;product=beta-N-acetylhexosaminidase;protein_id=WP_012735037.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1030858 1032258 . - . ID=gene-NIV78_RS04880;Name=NIV78_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04880 NZ_CP100136.1 Protein Homology CDS 1030858 1032258 . - 0 ID=cds-WP_012735038.1;Parent=gene-NIV78_RS04880;Dbxref=Genbank:WP_012735038.1;Name=WP_012735038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401253.1;locus_tag=NIV78_RS04880;product=sigma-54 dependent transcriptional regulator;protein_id=WP_012735038.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1032523 1033080 . - . ID=gene-NIV78_RS04885;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=NIV78_RS04885 NZ_CP100136.1 Protein Homology CDS 1032523 1033080 . - 0 ID=cds-WP_012735039.1;Parent=gene-NIV78_RS04885;Dbxref=Genbank:WP_012735039.1;Name=WP_012735039.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883975.1;locus_tag=NIV78_RS04885;product=elongation factor P;protein_id=WP_012735039.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1033327 1034526 . - . ID=gene-NIV78_RS04890;Name=earP;gbkey=Gene;gene=earP;gene_biotype=protein_coding;locus_tag=NIV78_RS04890 NZ_CP100136.1 Protein Homology CDS 1033327 1034526 . - 0 ID=cds-WP_017923153.1;Parent=gene-NIV78_RS04890;Dbxref=Genbank:WP_017923153.1;Name=WP_017923153.1;Ontology_term=GO:0106361;gbkey=CDS;gene=earP;go_function=protein-arginine rhamnosyltransferase activity|0106361||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735040.1;locus_tag=NIV78_RS04890;product=elongation factor P maturation arginine rhamnosyltransferase EarP;protein_id=WP_017923153.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1034604 1036871 . + . ID=gene-NIV78_RS04895;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=NIV78_RS04895 NZ_CP100136.1 Protein Homology CDS 1034604 1036871 . + 0 ID=cds-WP_251107282.1;Parent=gene-NIV78_RS04895;Dbxref=Genbank:WP_251107282.1;Name=WP_251107282.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735041.1;locus_tag=NIV78_RS04895;product=excinuclease ABC subunit UvrC;protein_id=WP_251107282.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1036950 1037543 . + . ID=gene-NIV78_RS04900;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=NIV78_RS04900 NZ_CP100136.1 Protein Homology CDS 1036950 1037543 . + 0 ID=cds-WP_012735042.1;Parent=gene-NIV78_RS04900;Dbxref=Genbank:WP_012735042.1;Name=WP_012735042.1;Ontology_term=GO:0008654,GO:0008444;gbkey=CDS;gene=pgsA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697096.1;locus_tag=NIV78_RS04900;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_012735042.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1037707 1037782 . + . ID=gene-NIV78_RS04905;Name=NIV78_RS04905;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS04905 NZ_CP100136.1 tRNAscan-SE tRNA 1037707 1037782 . + . ID=rna-NIV78_RS04905;Parent=gene-NIV78_RS04905;anticodon=(pos:1037740..1037742);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS04905;product=tRNA-Gly NZ_CP100136.1 tRNAscan-SE exon 1037707 1037782 . + . ID=exon-NIV78_RS04905-1;Parent=rna-NIV78_RS04905;anticodon=(pos:1037740..1037742);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS04905;product=tRNA-Gly NZ_CP100136.1 RefSeq gene 1037844 1037919 . + . ID=gene-NIV78_RS04910;Name=NIV78_RS04910;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS04910 NZ_CP100136.1 tRNAscan-SE tRNA 1037844 1037919 . + . ID=rna-NIV78_RS04910;Parent=gene-NIV78_RS04910;anticodon=(pos:1037877..1037879);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS04910;product=tRNA-Gly NZ_CP100136.1 tRNAscan-SE exon 1037844 1037919 . + . ID=exon-NIV78_RS04910-1;Parent=rna-NIV78_RS04910;anticodon=(pos:1037877..1037879);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS04910;product=tRNA-Gly NZ_CP100136.1 RefSeq gene 1038031 1038104 . + . ID=gene-NIV78_RS04915;Name=NIV78_RS04915;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS04915 NZ_CP100136.1 tRNAscan-SE tRNA 1038031 1038104 . + . ID=rna-NIV78_RS04915;Parent=gene-NIV78_RS04915;anticodon=(pos:1038063..1038065);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS04915;product=tRNA-Cys NZ_CP100136.1 tRNAscan-SE exon 1038031 1038104 . + . ID=exon-NIV78_RS04915-1;Parent=rna-NIV78_RS04915;anticodon=(pos:1038063..1038065);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS04915;product=tRNA-Cys NZ_CP100136.1 RefSeq pseudogene 1038269 1038668 . + . ID=gene-NIV78_RS04920;Name=NIV78_RS04920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS04920;partial=true;pseudo=true;start_range=.,1038269 NZ_CP100136.1 Protein Homology CDS 1038269 1038668 . + 0 ID=cds-NIV78_RS04920;Parent=gene-NIV78_RS04920;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890252.1;locus_tag=NIV78_RS04920;partial=true;product=DNA adenine methylase;pseudo=true;start_range=.,1038269;transl_table=11 NZ_CP100136.1 RefSeq gene 1038709 1038996 . - . ID=gene-NIV78_RS04925;Name=NIV78_RS04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04925 NZ_CP100136.1 Protein Homology CDS 1038709 1038996 . - 0 ID=cds-WP_012735043.1;Parent=gene-NIV78_RS04925;Dbxref=Genbank:WP_012735043.1;Name=WP_012735043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735043.1;locus_tag=NIV78_RS04925;product=hypothetical protein;protein_id=WP_012735043.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 1038993 1039471 . - . ID=gene-NIV78_RS04930;Name=NIV78_RS04930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS04930;pseudo=true NZ_CP100136.1 Protein Homology CDS 1038993 1039471 . - 0 ID=cds-NIV78_RS04930;Parent=gene-NIV78_RS04930;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004551969.1;locus_tag=NIV78_RS04930;product=DUF2778 domain-containing protein;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 1039823 1040581 . - . ID=gene-NIV78_RS04935;Name=NIV78_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04935 NZ_CP100136.1 Protein Homology CDS 1039823 1040581 . - 0 ID=cds-WP_012735044.1;Parent=gene-NIV78_RS04935;Dbxref=Genbank:WP_012735044.1;Name=WP_012735044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106146.1;locus_tag=NIV78_RS04935;product=toll/interleukin-1 receptor domain-containing protein;protein_id=WP_012735044.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1041723 1042226 . - . ID=gene-NIV78_RS04940;Name=NIV78_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04940 NZ_CP100136.1 Protein Homology CDS 1041723 1042226 . - 0 ID=cds-WP_017424677.1;Parent=gene-NIV78_RS04940;Dbxref=Genbank:WP_017424677.1;Name=WP_017424677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735045.1;locus_tag=NIV78_RS04940;product=GAF domain-containing protein;protein_id=WP_017424677.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1042376 1043281 . - . ID=gene-NIV78_RS04945;Name=NIV78_RS04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04945 NZ_CP100136.1 Protein Homology CDS 1042376 1043281 . - 0 ID=cds-WP_017923122.1;Parent=gene-NIV78_RS04945;Dbxref=Genbank:WP_017923122.1;Name=WP_017923122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197652.1;locus_tag=NIV78_RS04945;product=LysR family transcriptional regulator;protein_id=WP_017923122.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1043407 1044273 . + . ID=gene-NIV78_RS04950;Name=NIV78_RS04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04950 NZ_CP100136.1 Protein Homology CDS 1043407 1044273 . + 0 ID=cds-WP_159372595.1;Parent=gene-NIV78_RS04950;Dbxref=Genbank:WP_159372595.1;Name=WP_159372595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532092.1;locus_tag=NIV78_RS04950;product=pirin family protein;protein_id=WP_159372595.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1044414 1044917 . + . ID=gene-NIV78_RS04955;Name=NIV78_RS04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04955 NZ_CP100136.1 Protein Homology CDS 1044414 1044917 . + 0 ID=cds-WP_012735048.1;Parent=gene-NIV78_RS04955;Dbxref=Genbank:WP_012735048.1;Name=WP_012735048.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735048.1;locus_tag=NIV78_RS04955;product=GNAT family N-acetyltransferase;protein_id=WP_012735048.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1044939 1045811 . - . ID=gene-NIV78_RS04960;Name=NIV78_RS04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04960 NZ_CP100136.1 Protein Homology CDS 1044939 1045811 . - 0 ID=cds-WP_012735049.1;Parent=gene-NIV78_RS04960;Dbxref=Genbank:WP_012735049.1;Name=WP_012735049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009955133.1;locus_tag=NIV78_RS04960;product=cytochrome c oxidase assembly protein;protein_id=WP_012735049.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1045849 1046460 . - . ID=gene-NIV78_RS04965;Name=NIV78_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04965 NZ_CP100136.1 Protein Homology CDS 1045849 1046460 . - 0 ID=cds-WP_045678888.1;Parent=gene-NIV78_RS04965;Dbxref=Genbank:WP_045678888.1;Name=WP_045678888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476463.1;locus_tag=NIV78_RS04965;product=SCO family protein;protein_id=WP_045678888.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1046835 1047587 . + . ID=gene-NIV78_RS04970;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=NIV78_RS04970 NZ_CP100136.1 Protein Homology CDS 1046835 1047587 . + 0 ID=cds-WP_017923386.1;Parent=gene-NIV78_RS04970;Dbxref=Genbank:WP_017923386.1;Name=WP_017923386.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656375.1;locus_tag=NIV78_RS04970;product=trehalose-phosphatase;protein_id=WP_017923386.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1047584 1048987 . + . ID=gene-NIV78_RS04975;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=NIV78_RS04975 NZ_CP100136.1 Protein Homology CDS 1047584 1048987 . + 0 ID=cds-WP_017424707.1;Parent=gene-NIV78_RS04975;Dbxref=Genbank:WP_017424707.1;Name=WP_017424707.1;Ontology_term=GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735052.1;locus_tag=NIV78_RS04975;product=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming);protein_id=WP_017424707.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1049051 1050883 . - . ID=gene-NIV78_RS04980;Name=NIV78_RS04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04980 NZ_CP100136.1 Protein Homology CDS 1049051 1050883 . - 0 ID=cds-WP_012735053.1;Parent=gene-NIV78_RS04980;Dbxref=Genbank:WP_012735053.1;Name=WP_012735053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735053.1;locus_tag=NIV78_RS04980;product=ABC transporter ATP-binding protein/permease;protein_id=WP_012735053.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1051521 1052585 . + . ID=gene-NIV78_RS04985;Name=NIV78_RS04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04985 NZ_CP100136.1 Protein Homology CDS 1051521 1052585 . + 0 ID=cds-WP_012735054.1;Parent=gene-NIV78_RS04985;Dbxref=Genbank:WP_012735054.1;Name=WP_012735054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476459.1;locus_tag=NIV78_RS04985;product=glycosyltransferase family 4 protein;protein_id=WP_012735054.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1052811 1053896 . + . ID=gene-NIV78_RS04990;Name=NIV78_RS04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04990 NZ_CP100136.1 Protein Homology CDS 1052811 1053896 . + 0 ID=cds-WP_251107283.1;Parent=gene-NIV78_RS04990;Dbxref=Genbank:WP_251107283.1;Name=WP_251107283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735055.1;locus_tag=NIV78_RS04990;product=hypothetical protein;protein_id=WP_251107283.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1054015 1054482 . + . ID=gene-NIV78_RS04995;Name=NIV78_RS04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS04995 NZ_CP100136.1 Protein Homology CDS 1054015 1054482 . + 0 ID=cds-WP_017923646.1;Parent=gene-NIV78_RS04995;Dbxref=Genbank:WP_017923646.1;Name=WP_017923646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476457.1;locus_tag=NIV78_RS04995;product=DUF2214 family protein;protein_id=WP_017923646.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1054732 1055490 . + . ID=gene-NIV78_RS05000;Name=NIV78_RS05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05000 NZ_CP100136.1 Protein Homology CDS 1054732 1055490 . + 0 ID=cds-WP_012735057.1;Parent=gene-NIV78_RS05000;Dbxref=Genbank:WP_012735057.1;Name=WP_012735057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401228.1;locus_tag=NIV78_RS05000;product=FadR family transcriptional regulator;protein_id=WP_012735057.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1055683 1056525 . + . ID=gene-NIV78_RS05005;Name=NIV78_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05005 NZ_CP100136.1 Protein Homology CDS 1055683 1056525 . + 0 ID=cds-WP_017424036.1;Parent=gene-NIV78_RS05005;Dbxref=Genbank:WP_017424036.1;Name=WP_017424036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424036.1;locus_tag=NIV78_RS05005;product=NAD(P)-dependent oxidoreductase;protein_id=WP_017424036.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1056664 1058760 . - . ID=gene-NIV78_RS05010;Name=NIV78_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05010 NZ_CP100136.1 Protein Homology CDS 1056664 1058760 . - 0 ID=cds-WP_012735059.1;Parent=gene-NIV78_RS05010;Dbxref=Genbank:WP_012735059.1;Name=WP_012735059.1;Ontology_term=GO:0004629;gbkey=CDS;go_function=phospholipase C activity|0004629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600326.1;locus_tag=NIV78_RS05010;product=phospholipase C%2C phosphocholine-specific;protein_id=WP_012735059.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1059116 1061605 . - . ID=gene-NIV78_RS05015;Name=NIV78_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05015 NZ_CP100136.1 Protein Homology CDS 1059116 1061605 . - 0 ID=cds-WP_012735060.1;Parent=gene-NIV78_RS05015;Dbxref=Genbank:WP_012735060.1;Name=WP_012735060.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012402502.1;locus_tag=NIV78_RS05015;product=FAD-dependent oxidoreductase;protein_id=WP_012735060.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1061934 1062797 . - . ID=gene-NIV78_RS05020;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=NIV78_RS05020 NZ_CP100136.1 Protein Homology CDS 1061934 1062797 . - 0 ID=cds-WP_012735061.1;Parent=gene-NIV78_RS05020;Dbxref=Genbank:WP_012735061.1;Name=WP_012735061.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199376.1;locus_tag=NIV78_RS05020;product=pyridoxal kinase PdxY;protein_id=WP_012735061.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1063128 1064120 . - . ID=gene-NIV78_RS05025;Name=NIV78_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05025 NZ_CP100136.1 Protein Homology CDS 1063128 1064120 . - 0 ID=cds-WP_012735062.1;Parent=gene-NIV78_RS05025;Dbxref=Genbank:WP_012735062.1;Name=WP_012735062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735062.1;locus_tag=NIV78_RS05025;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_012735062.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1064791 1066077 . + . ID=gene-NIV78_RS05030;Name=hpnI;gbkey=Gene;gene=hpnI;gene_biotype=protein_coding;locus_tag=NIV78_RS05030 NZ_CP100136.1 Protein Homology CDS 1064791 1066077 . + 0 ID=cds-WP_159372588.1;Parent=gene-NIV78_RS05030;Dbxref=Genbank:WP_159372588.1;Name=WP_159372588.1;Ontology_term=GO:0016757;gbkey=CDS;gene=hpnI;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735063.1;locus_tag=NIV78_RS05030;product=bacteriohopanetetrol glucosamine biosynthesis glycosyltransferase HpnI;protein_id=WP_159372588.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1066074 1067495 . + . ID=gene-NIV78_RS05035;Name=hpnJ;gbkey=Gene;gene=hpnJ;gene_biotype=protein_coding;locus_tag=NIV78_RS05035 NZ_CP100136.1 Protein Homology CDS 1066074 1067495 . + 0 ID=cds-WP_017424621.1;Parent=gene-NIV78_RS05035;Dbxref=Genbank:WP_017424621.1;Name=WP_017424621.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;gene=hpnJ;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007181785.1;locus_tag=NIV78_RS05035;product=hopanoid biosynthesis associated radical SAM protein HpnJ;protein_id=WP_017424621.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1067500 1068411 . + . ID=gene-NIV78_RS05040;Name=hpnK;gbkey=Gene;gene=hpnK;gene_biotype=protein_coding;locus_tag=NIV78_RS05040 NZ_CP100136.1 Protein Homology CDS 1067500 1068411 . + 0 ID=cds-WP_012735065.1;Parent=gene-NIV78_RS05040;Dbxref=Genbank:WP_012735065.1;Name=WP_012735065.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=hpnK;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401218.1;locus_tag=NIV78_RS05040;product=hopanoid biosynthesis-associated protein HpnK;protein_id=WP_012735065.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1068408 1069451 . + . ID=gene-NIV78_RS05045;Name=NIV78_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05045 NZ_CP100136.1 Protein Homology CDS 1068408 1069451 . + 0 ID=cds-WP_012735066.1;Parent=gene-NIV78_RS05045;Dbxref=Genbank:WP_012735066.1;Name=WP_012735066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004524636.1;locus_tag=NIV78_RS05045;product=lysylphosphatidylglycerol synthase domain-containing protein;protein_id=WP_012735066.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1069619 1070191 . + . ID=gene-NIV78_RS05050;Name=NIV78_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05050 NZ_CP100136.1 Protein Homology CDS 1069619 1070191 . + 0 ID=cds-WP_043307101.1;Parent=gene-NIV78_RS05050;Dbxref=Genbank:WP_043307101.1;Name=WP_043307101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697173.1;locus_tag=NIV78_RS05050;product=outer membrane protein assembly factor BamE;protein_id=WP_043307101.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1070623 1071312 . + . ID=gene-NIV78_RS05055;Name=hisQ;gbkey=Gene;gene=hisQ;gene_biotype=protein_coding;locus_tag=NIV78_RS05055 NZ_CP100136.1 Protein Homology CDS 1070623 1071312 . + 0 ID=cds-WP_012735068.1;Parent=gene-NIV78_RS05055;Dbxref=Genbank:WP_012735068.1;Name=WP_012735068.1;Ontology_term=GO:0003333,GO:0022857,GO:0016021,GO:0043190;gbkey=CDS;gene=hisQ;go_component=integral component of membrane|0016021||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527442.1;locus_tag=NIV78_RS05055;product=histidine ABC transporter permease HisQ;protein_id=WP_012735068.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1071309 1072022 . + . ID=gene-NIV78_RS05060;Name=NIV78_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05060 NZ_CP100136.1 Protein Homology CDS 1071309 1072022 . + 0 ID=cds-WP_017424506.1;Parent=gene-NIV78_RS05060;Dbxref=Genbank:WP_017424506.1;Name=WP_017424506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424506.1;locus_tag=NIV78_RS05060;product=ABC transporter permease;protein_id=WP_017424506.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1072049 1072843 . + . ID=gene-NIV78_RS05065;Name=NIV78_RS05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05065 NZ_CP100136.1 Protein Homology CDS 1072049 1072843 . + 0 ID=cds-WP_251107285.1;Parent=gene-NIV78_RS05065;Dbxref=Genbank:WP_251107285.1;Name=WP_251107285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254933.1;locus_tag=NIV78_RS05065;product=ATP-binding cassette domain-containing protein;protein_id=WP_251107285.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1072857 1073900 . + . ID=gene-NIV78_RS05070;Name=NIV78_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05070 NZ_CP100136.1 Protein Homology CDS 1072857 1073900 . + 0 ID=cds-WP_012735071.1;Parent=gene-NIV78_RS05070;Dbxref=Genbank:WP_012735071.1;Name=WP_012735071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735071.1;locus_tag=NIV78_RS05070;product=GlxA family transcriptional regulator;protein_id=WP_012735071.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1074055 1075275 . + . ID=gene-NIV78_RS05075;Name=NIV78_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05075 NZ_CP100136.1 Protein Homology CDS 1074055 1075275 . + 0 ID=cds-WP_012735072.1;Parent=gene-NIV78_RS05075;Dbxref=Genbank:WP_012735072.1;Name=WP_012735072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425465.1;locus_tag=NIV78_RS05075;product=aspartate aminotransferase family protein;protein_id=WP_012735072.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1075301 1076395 . + . ID=gene-NIV78_RS05080;Name=aruF;gbkey=Gene;gene=aruF;gene_biotype=protein_coding;locus_tag=NIV78_RS05080 NZ_CP100136.1 Protein Homology CDS 1075301 1076395 . + 0 ID=cds-WP_012735073.1;Parent=gene-NIV78_RS05080;Dbxref=Genbank:WP_012735073.1;Name=WP_012735073.1;gbkey=CDS;gene=aruF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735073.1;locus_tag=NIV78_RS05080;product=arginine/ornithine succinyltransferase subunit alpha;protein_id=WP_012735073.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1076392 1077423 . + . ID=gene-NIV78_RS05085;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=NIV78_RS05085 NZ_CP100136.1 Protein Homology CDS 1076392 1077423 . + 0 ID=cds-WP_012735074.1;Parent=gene-NIV78_RS05085;Dbxref=Genbank:WP_012735074.1;Name=WP_012735074.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735074.1;locus_tag=NIV78_RS05085;product=arginine N-succinyltransferase;protein_id=WP_012735074.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1077428 1078891 . + . ID=gene-NIV78_RS05090;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=NIV78_RS05090 NZ_CP100136.1 Protein Homology CDS 1077428 1078891 . + 0 ID=cds-WP_017923286.1;Parent=gene-NIV78_RS05090;Dbxref=Genbank:WP_017923286.1;Name=WP_017923286.1;Ontology_term=GO:0006527,GO:0016620;gbkey=CDS;gene=astD;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656401.1;locus_tag=NIV78_RS05090;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_017923286.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1078904 1080256 . + . ID=gene-NIV78_RS05095;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=NIV78_RS05095 NZ_CP100136.1 Protein Homology CDS 1078904 1080256 . + 0 ID=cds-WP_159372587.1;Parent=gene-NIV78_RS05095;Dbxref=Genbank:WP_159372587.1;Name=WP_159372587.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735076.1;locus_tag=NIV78_RS05095;product=N-succinylarginine dihydrolase;protein_id=WP_159372587.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1080240 1081319 . + . ID=gene-NIV78_RS05100;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=NIV78_RS05100 NZ_CP100136.1 Protein Homology CDS 1080240 1081319 . + 0 ID=cds-WP_251107286.1;Parent=gene-NIV78_RS05100;Dbxref=Genbank:WP_251107286.1;Name=WP_251107286.1;Ontology_term=GO:0006527,GO:0009017;gbkey=CDS;gene=astE;go_function=succinylglutamate desuccinylase activity|0009017||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735077.1;locus_tag=NIV78_RS05100;product=succinylglutamate desuccinylase;protein_id=WP_251107286.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1081547 1082344 . + . ID=gene-NIV78_RS05105;Name=NIV78_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05105 NZ_CP100136.1 Protein Homology CDS 1081547 1082344 . + 0 ID=cds-WP_017924578.1;Parent=gene-NIV78_RS05105;Dbxref=Genbank:WP_017924578.1;Name=WP_017924578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025859.1;locus_tag=NIV78_RS05105;product=ABC transporter substrate-binding protein;protein_id=WP_017924578.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1082499 1084007 . - . ID=gene-NIV78_RS05110;Name=NIV78_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05110 NZ_CP100136.1 Protein Homology CDS 1082499 1084007 . - 0 ID=cds-WP_251107287.1;Parent=gene-NIV78_RS05110;Dbxref=Genbank:WP_251107287.1;Name=WP_251107287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735079.1;locus_tag=NIV78_RS05110;product=HDOD domain-containing protein;protein_id=WP_251107287.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1084032 1085774 . - . ID=gene-NIV78_RS05115;Name=cdpA;gbkey=Gene;gene=cdpA;gene_biotype=protein_coding;locus_tag=NIV78_RS05115 NZ_CP100136.1 Protein Homology CDS 1084032 1085774 . - 0 ID=cds-WP_194290229.1;Parent=gene-NIV78_RS05115;Dbxref=Genbank:WP_194290229.1;Name=WP_194290229.1;gbkey=CDS;gene=cdpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735080.1;locus_tag=NIV78_RS05115;product=cyclic di-GMP phosphodiesterase CdpA;protein_id=WP_194290229.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1086052 1086600 . + . ID=gene-NIV78_RS05120;Name=NIV78_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05120 NZ_CP100136.1 Protein Homology CDS 1086052 1086600 . + 0 ID=cds-WP_012735081.1;Parent=gene-NIV78_RS05120;Dbxref=Genbank:WP_012735081.1;Name=WP_012735081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897592.1;locus_tag=NIV78_RS05120;product=peroxiredoxin;protein_id=WP_012735081.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1086690 1087319 . - . ID=gene-NIV78_RS05125;Name=NIV78_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05125 NZ_CP100136.1 Protein Homology CDS 1086690 1087319 . - 0 ID=cds-WP_012735082.1;Parent=gene-NIV78_RS05125;Dbxref=Genbank:WP_012735082.1;Name=WP_012735082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735082.1;locus_tag=NIV78_RS05125;product=SDR family oxidoreductase;protein_id=WP_012735082.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1087616 1090918 . - . ID=gene-NIV78_RS05130;Name=NIV78_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05130 NZ_CP100136.1 Protein Homology CDS 1087616 1090918 . - 0 ID=cds-WP_100556428.1;Parent=gene-NIV78_RS05130;Dbxref=Genbank:WP_100556428.1;Name=WP_100556428.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735083.1;locus_tag=NIV78_RS05130;product=efflux RND transporter permease subunit;protein_id=WP_100556428.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1090922 1094044 . - . ID=gene-NIV78_RS05135;Name=NIV78_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05135 NZ_CP100136.1 Protein Homology CDS 1090922 1094044 . - 0 ID=cds-WP_012735084.1;Parent=gene-NIV78_RS05135;Dbxref=Genbank:WP_012735084.1;Name=WP_012735084.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735084.1;locus_tag=NIV78_RS05135;product=MdtB/MuxB family multidrug efflux RND transporter permease subunit;protein_id=WP_012735084.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1094058 1095410 . - . ID=gene-NIV78_RS05140;Name=NIV78_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05140 NZ_CP100136.1 Protein Homology CDS 1094058 1095410 . - 0 ID=cds-WP_012735085.1;Parent=gene-NIV78_RS05140;Dbxref=Genbank:WP_012735085.1;Name=WP_012735085.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424965.1;locus_tag=NIV78_RS05140;product=MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit;protein_id=WP_012735085.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1095759 1096586 . - . ID=gene-NIV78_RS05145;Name=NIV78_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05145 NZ_CP100136.1 Protein Homology CDS 1095759 1096586 . - 0 ID=cds-WP_012735086.1;Parent=gene-NIV78_RS05145;Dbxref=Genbank:WP_012735086.1;Name=WP_012735086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735086.1;locus_tag=NIV78_RS05145;product=IclR family transcriptional regulator;protein_id=WP_012735086.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1097171 1099144 . - . ID=gene-NIV78_RS05150;Name=NIV78_RS05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05150 NZ_CP100136.1 Protein Homology CDS 1097171 1099144 . - 0 ID=cds-WP_017923905.1;Parent=gene-NIV78_RS05150;Dbxref=Genbank:WP_017923905.1;Name=WP_017923905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735087.1;locus_tag=NIV78_RS05150;product=DUF839 domain-containing protein;protein_id=WP_017923905.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1099396 1100589 . - . ID=gene-NIV78_RS05155;Name=NIV78_RS05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05155 NZ_CP100136.1 Protein Homology CDS 1099396 1100589 . - 0 ID=cds-WP_017924153.1;Parent=gene-NIV78_RS05155;Dbxref=Genbank:WP_017924153.1;Name=WP_017924153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694238.1;locus_tag=NIV78_RS05155;product=ammonium transporter;protein_id=WP_017924153.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1100961 1101401 . + . ID=gene-NIV78_RS05160;Name=NIV78_RS05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05160 NZ_CP100136.1 Protein Homology CDS 1100961 1101401 . + 0 ID=cds-WP_251107288.1;Parent=gene-NIV78_RS05160;Dbxref=Genbank:WP_251107288.1;Name=WP_251107288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697200.1;locus_tag=NIV78_RS05160;product=hypothetical protein;protein_id=WP_251107288.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1101504 1101941 . + . ID=gene-NIV78_RS05165;Name=NIV78_RS05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05165 NZ_CP100136.1 Protein Homology CDS 1101504 1101941 . + 0 ID=cds-WP_012735090.1;Parent=gene-NIV78_RS05165;Dbxref=Genbank:WP_012735090.1;Name=WP_012735090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735090.1;locus_tag=NIV78_RS05165;product=Rrf2 family transcriptional regulator;protein_id=WP_012735090.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1102051 1102695 . + . ID=gene-NIV78_RS05170;Name=NIV78_RS05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05170 NZ_CP100136.1 Protein Homology CDS 1102051 1102695 . + 0 ID=cds-WP_012735091.1;Parent=gene-NIV78_RS05170;Dbxref=Genbank:WP_012735091.1;Name=WP_012735091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213741.1;locus_tag=NIV78_RS05170;product=NAD(P)H-binding protein;protein_id=WP_012735091.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1102872 1103342 . + . ID=gene-NIV78_RS05175;Name=NIV78_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05175 NZ_CP100136.1 Protein Homology CDS 1102872 1103342 . + 0 ID=cds-WP_012735092.1;Parent=gene-NIV78_RS05175;Dbxref=Genbank:WP_012735092.1;Name=WP_012735092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735092.1;locus_tag=NIV78_RS05175;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_012735092.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1103402 1103596 . + . ID=gene-NIV78_RS05180;Name=NIV78_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05180 NZ_CP100136.1 Protein Homology CDS 1103402 1103596 . + 0 ID=cds-WP_012735093.1;Parent=gene-NIV78_RS05180;Dbxref=Genbank:WP_012735093.1;Name=WP_012735093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735093.1;locus_tag=NIV78_RS05180;product=hypothetical protein;protein_id=WP_012735093.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1103667 1105979 . - . ID=gene-NIV78_RS05185;Name=NIV78_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05185 NZ_CP100136.1 Protein Homology CDS 1103667 1105979 . - 0 ID=cds-WP_012735094.1;Parent=gene-NIV78_RS05185;Dbxref=Genbank:WP_012735094.1;Name=WP_012735094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004534567.1;locus_tag=NIV78_RS05185;product=FUSC family protein;protein_id=WP_012735094.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1106168 1109512 . + . ID=gene-NIV78_RS05190;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=NIV78_RS05190 NZ_CP100136.1 Protein Homology CDS 1106168 1109512 . + 0 ID=cds-WP_251107289.1;Parent=gene-NIV78_RS05190;Dbxref=Genbank:WP_251107289.1;Name=WP_251107289.1;Ontology_term=GO:0006281,GO:0006310,GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011204976.1;locus_tag=NIV78_RS05190;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_251107289.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1109509 1113258 . + . ID=gene-NIV78_RS05195;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=NIV78_RS05195 NZ_CP100136.1 Protein Homology CDS 1109509 1113258 . + 0 ID=cds-WP_251107290.1;Parent=gene-NIV78_RS05195;Dbxref=Genbank:WP_251107290.1;Name=WP_251107290.1;Ontology_term=GO:0006281,GO:0006310,GO:0008854,GO:0009338;gbkey=CDS;gene=recB;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735095.1;locus_tag=NIV78_RS05195;product=exodeoxyribonuclease V subunit beta;protein_id=WP_251107290.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1113255 1115576 . + . ID=gene-NIV78_RS05200;Name=NIV78_RS05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05200 NZ_CP100136.1 Protein Homology CDS 1113255 1115576 . + 0 ID=cds-WP_012735096.1;Parent=gene-NIV78_RS05200;Dbxref=Genbank:WP_012735096.1;Name=WP_012735096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697208.1;locus_tag=NIV78_RS05200;product=AAA family ATPase;protein_id=WP_012735096.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1115879 1116037 . - . ID=gene-NIV78_RS05205;Name=NIV78_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05205 NZ_CP100136.1 GeneMarkS-2+ CDS 1115879 1116037 . - 0 ID=cds-WP_157384139.1;Parent=gene-NIV78_RS05205;Dbxref=Genbank:WP_157384139.1;Name=WP_157384139.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS05205;product=hypothetical protein;protein_id=WP_157384139.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1116322 1116762 . - . ID=gene-NIV78_RS05210;Name=NIV78_RS05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05210 NZ_CP100136.1 GeneMarkS-2+ CDS 1116322 1116762 . - 0 ID=cds-WP_124836728.1;Parent=gene-NIV78_RS05210;Dbxref=Genbank:WP_124836728.1;Name=WP_124836728.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS05210;product=hypothetical protein;protein_id=WP_124836728.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1117088 1118773 . + . ID=gene-NIV78_RS05215;Name=aspT;gbkey=Gene;gene=aspT;gene_biotype=protein_coding;locus_tag=NIV78_RS05215 NZ_CP100136.1 Protein Homology CDS 1117088 1118773 . + 0 ID=cds-WP_257757255.1;Parent=gene-NIV78_RS05215;Dbxref=Genbank:WP_257757255.1;Name=WP_257757255.1;Ontology_term=GO:0015297,GO:0070906;gbkey=CDS;gene=aspT;go_function=antiporter activity|0015297||IEA,aspartate:alanine antiporter activity|0070906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020069753.1;locus_tag=NIV78_RS05215;product=aspartate-alanine antiporter;protein_id=WP_257757255.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1118893 1120548 . + . ID=gene-NIV78_RS05220;Name=NIV78_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05220 NZ_CP100136.1 Protein Homology CDS 1118893 1120548 . + 0 ID=cds-WP_012735098.1;Parent=gene-NIV78_RS05220;Dbxref=Genbank:WP_012735098.1;Name=WP_012735098.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735098.1;locus_tag=NIV78_RS05220;product=bifunctional aspartate transaminase/aspartate 4-decarboxylase;protein_id=WP_012735098.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1120701 1121123 . + . ID=gene-NIV78_RS05225;Name=NIV78_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05225 NZ_CP100136.1 Protein Homology CDS 1120701 1121123 . + 0 ID=cds-WP_251107292.1;Parent=gene-NIV78_RS05225;Dbxref=Genbank:WP_251107292.1;Name=WP_251107292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424827.1;locus_tag=NIV78_RS05225;product=hypothetical protein;protein_id=WP_251107292.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1121136 1122422 . - . ID=gene-NIV78_RS05230;Name=NIV78_RS05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05230 NZ_CP100136.1 Protein Homology CDS 1121136 1122422 . - 0 ID=cds-WP_017923239.1;Parent=gene-NIV78_RS05230;Dbxref=Genbank:WP_017923239.1;Name=WP_017923239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424826.1;locus_tag=NIV78_RS05230;product=EAL domain-containing protein;protein_id=WP_017923239.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1122824 1123750 . - . ID=gene-NIV78_RS05235;Name=NIV78_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05235 NZ_CP100136.1 Protein Homology CDS 1122824 1123750 . - 0 ID=cds-WP_017923814.1;Parent=gene-NIV78_RS05235;Dbxref=Genbank:WP_017923814.1;Name=WP_017923814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656437.1;locus_tag=NIV78_RS05235;product=DMT family transporter;protein_id=WP_017923814.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1124005 1124319 . - . ID=gene-NIV78_RS05240;Name=NIV78_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05240 NZ_CP100136.1 Protein Homology CDS 1124005 1124319 . - 0 ID=cds-WP_017923813.1;Parent=gene-NIV78_RS05240;Dbxref=Genbank:WP_017923813.1;Name=WP_017923813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735101.1;locus_tag=NIV78_RS05240;product=hypothetical protein;protein_id=WP_017923813.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1124600 1124812 . - . ID=gene-NIV78_RS05245;Name=NIV78_RS05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05245 NZ_CP100136.1 Protein Homology CDS 1124600 1124812 . - 0 ID=cds-WP_012735102.1;Parent=gene-NIV78_RS05245;Dbxref=Genbank:WP_012735102.1;Name=WP_012735102.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011402513.1;locus_tag=NIV78_RS05245;product=glycine zipper 2TM domain-containing protein;protein_id=WP_012735102.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1125001 1126932 . - . ID=gene-NIV78_RS05250;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=NIV78_RS05250 NZ_CP100136.1 Protein Homology CDS 1125001 1126932 . - 0 ID=cds-WP_017923812.1;Parent=gene-NIV78_RS05250;Dbxref=Genbank:WP_017923812.1;Name=WP_017923812.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697214.1;locus_tag=NIV78_RS05250;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_017923812.1;transl_table=11 NZ_CP100136.1 cmsearch riboswitch 1127007 1127123 . - . ID=id-NZ_CP100136.1:1127007..1127123;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP100136.1 RefSeq gene 1127623 1128570 . + . ID=gene-NIV78_RS05255;Name=NIV78_RS05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05255 NZ_CP100136.1 Protein Homology CDS 1127623 1128570 . + 0 ID=cds-WP_012735104.1;Parent=gene-NIV78_RS05255;Dbxref=Genbank:WP_012735104.1;Name=WP_012735104.1;Ontology_term=GO:0016020,GO:0016021;gbkey=CDS;go_component=membrane|0016020||IEA,integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004534655.1;locus_tag=NIV78_RS05255;product=EamA family transporter;protein_id=WP_012735104.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 1128676 1129884 . - . ID=gene-NIV78_RS05260;Name=NIV78_RS05260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS05260;pseudo=true NZ_CP100136.1 Protein Homology CDS 1128676 1129884 . - 0 ID=cds-NIV78_RS05260;Parent=gene-NIV78_RS05260;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735105.1;locus_tag=NIV78_RS05260;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 1130066 1130890 . - . ID=gene-NIV78_RS05265;Name=NIV78_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05265 NZ_CP100136.1 Protein Homology CDS 1130066 1130890 . - 0 ID=cds-WP_012735106.1;Parent=gene-NIV78_RS05265;Dbxref=Genbank:WP_012735106.1;Name=WP_012735106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762416.1;locus_tag=NIV78_RS05265;product=phosphodiesterase;protein_id=WP_012735106.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1130927 1131955 . - . ID=gene-NIV78_RS05270;Name=NIV78_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05270 NZ_CP100136.1 Protein Homology CDS 1130927 1131955 . - 0 ID=cds-WP_012735107.1;Parent=gene-NIV78_RS05270;Dbxref=Genbank:WP_012735107.1;Name=WP_012735107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735107.1;locus_tag=NIV78_RS05270;product=ABC transporter ATP-binding protein;protein_id=WP_012735107.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1131952 1132941 . - . ID=gene-NIV78_RS05275;Name=NIV78_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05275 NZ_CP100136.1 Protein Homology CDS 1131952 1132941 . - 0 ID=cds-WP_012735108.1;Parent=gene-NIV78_RS05275;Dbxref=Genbank:WP_012735108.1;Name=WP_012735108.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004200134.1;locus_tag=NIV78_RS05275;product=ABC transporter permease subunit;protein_id=WP_012735108.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1132952 1133773 . - . ID=gene-NIV78_RS05280;Name=NIV78_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05280 NZ_CP100136.1 Protein Homology CDS 1132952 1133773 . - 0 ID=cds-WP_035978555.1;Parent=gene-NIV78_RS05280;Dbxref=Genbank:WP_035978555.1;Name=WP_035978555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255790.1;locus_tag=NIV78_RS05280;product=ABC transporter permease;protein_id=WP_035978555.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1133785 1134834 . - . ID=gene-NIV78_RS05285;Name=NIV78_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05285 NZ_CP100136.1 Protein Homology CDS 1133785 1134834 . - 0 ID=cds-WP_012735110.1;Parent=gene-NIV78_RS05285;Dbxref=Genbank:WP_012735110.1;Name=WP_012735110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735110.1;locus_tag=NIV78_RS05285;product=ABC transporter substrate-binding protein;protein_id=WP_012735110.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1135001 1136035 . - . ID=gene-NIV78_RS05290;Name=NIV78_RS05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05290 NZ_CP100136.1 Protein Homology CDS 1135001 1136035 . - 0 ID=cds-WP_012735111.1;Parent=gene-NIV78_RS05290;Dbxref=Genbank:WP_012735111.1;Name=WP_012735111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735111.1;locus_tag=NIV78_RS05290;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_012735111.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1137270 1137554 . + . ID=gene-NIV78_RS05295;Name=NIV78_RS05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05295 NZ_CP100136.1 GeneMarkS-2+ CDS 1137270 1137554 . + 0 ID=cds-WP_157384092.1;Parent=gene-NIV78_RS05295;Dbxref=Genbank:WP_157384092.1;Name=WP_157384092.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS05295;product=hypothetical protein;protein_id=WP_157384092.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1137746 1140445 . + . ID=gene-NIV78_RS05300;Name=NIV78_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05300 NZ_CP100136.1 Protein Homology CDS 1137746 1140445 . + 0 ID=cds-WP_251107293.1;Parent=gene-NIV78_RS05300;Dbxref=Genbank:WP_251107293.1;Name=WP_251107293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696768.1;locus_tag=NIV78_RS05300;product=type VI secretion system tip protein VgrG;protein_id=WP_251107293.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1140464 1141630 . + . ID=gene-NIV78_RS05305;Name=NIV78_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05305 NZ_CP100136.1 Protein Homology CDS 1140464 1141630 . + 0 ID=cds-WP_017923963.1;Parent=gene-NIV78_RS05305;Dbxref=Genbank:WP_017923963.1;Name=WP_017923963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696769.1;locus_tag=NIV78_RS05305;product=hypothetical protein;protein_id=WP_017923963.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1141695 1142576 . + . ID=gene-NIV78_RS05310;Name=NIV78_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05310 NZ_CP100136.1 Protein Homology CDS 1141695 1142576 . + 0 ID=cds-WP_232734616.1;Parent=gene-NIV78_RS05310;Dbxref=Genbank:WP_232734616.1;Name=WP_232734616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735112.1;locus_tag=NIV78_RS05310;product=hypothetical protein;protein_id=WP_232734616.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1142629 1143555 . - . ID=gene-NIV78_RS05315;Name=NIV78_RS05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05315 NZ_CP100136.1 Protein Homology CDS 1142629 1143555 . - 0 ID=cds-WP_012735113.1;Parent=gene-NIV78_RS05315;Dbxref=Genbank:WP_012735113.1;Name=WP_012735113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735113.1;locus_tag=NIV78_RS05315;product=bile acid:sodium symporter family protein;protein_id=WP_012735113.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1143983 1144975 . - . ID=gene-NIV78_RS05320;Name=NIV78_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05320 NZ_CP100136.1 GeneMarkS-2+ CDS 1143983 1144975 . - 0 ID=cds-WP_251107294.1;Parent=gene-NIV78_RS05320;Dbxref=Genbank:WP_251107294.1;Name=WP_251107294.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS05320;product=hypothetical protein;protein_id=WP_251107294.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1145161 1147107 . - . ID=gene-NIV78_RS05325;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=NIV78_RS05325 NZ_CP100136.1 Protein Homology CDS 1145161 1147107 . - 0 ID=cds-WP_100556508.1;Parent=gene-NIV78_RS05325;Dbxref=Genbank:WP_100556508.1;Name=WP_100556508.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735115.1;locus_tag=NIV78_RS05325;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_100556508.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1147453 1150125 . - . ID=gene-NIV78_RS05330;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=NIV78_RS05330 NZ_CP100136.1 Protein Homology CDS 1147453 1150125 . - 0 ID=cds-WP_012735116.1;Parent=gene-NIV78_RS05330;Dbxref=Genbank:WP_012735116.1;Name=WP_012735116.1;Ontology_term=GO:0006086,GO:0004738,GO:0045250;gbkey=CDS;gene=aceE;go_component=cytosolic pyruvate dehydrogenase complex|0045250||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012079736.1;locus_tag=NIV78_RS05330;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_012735116.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1150311 1150775 . + . ID=gene-NIV78_RS05335;Name=NIV78_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05335 NZ_CP100136.1 Protein Homology CDS 1150311 1150775 . + 0 ID=cds-WP_012735117.1;Parent=gene-NIV78_RS05335;Dbxref=Genbank:WP_012735117.1;Name=WP_012735117.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735117.1;locus_tag=NIV78_RS05335;product=MarR family transcriptional regulator;protein_id=WP_012735117.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1150806 1151618 . - . ID=gene-NIV78_RS05340;Name=NIV78_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05340 NZ_CP100136.1 Protein Homology CDS 1150806 1151618 . - 0 ID=cds-WP_012735118.1;Parent=gene-NIV78_RS05340;Dbxref=Genbank:WP_012735118.1;Name=WP_012735118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735118.1;locus_tag=NIV78_RS05340;product=inositol-phosphate phosphatase;protein_id=WP_012735118.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1151694 1151954 . - . ID=gene-NIV78_RS05345;Name=NIV78_RS05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05345 NZ_CP100136.1 Protein Homology CDS 1151694 1151954 . - 0 ID=cds-WP_012735119.1;Parent=gene-NIV78_RS05345;Dbxref=Genbank:WP_012735119.1;Name=WP_012735119.1;Ontology_term=GO:0051537;gbkey=CDS;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735119.1;locus_tag=NIV78_RS05345;product=Rieske 2Fe-2S domain-containing protein;protein_id=WP_012735119.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1152133 1152966 . - . ID=gene-NIV78_RS05350;Name=NIV78_RS05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05350 NZ_CP100136.1 Protein Homology CDS 1152133 1152966 . - 0 ID=cds-WP_026051350.1;Parent=gene-NIV78_RS05350;Dbxref=Genbank:WP_026051350.1;Name=WP_026051350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735120.1;locus_tag=NIV78_RS05350;product=iron-containing redox enzyme family protein;protein_id=WP_026051350.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1152963 1153769 . - . ID=gene-NIV78_RS05355;Name=NIV78_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05355 NZ_CP100136.1 Protein Homology CDS 1152963 1153769 . - 0 ID=cds-WP_012735121.1;Parent=gene-NIV78_RS05355;Dbxref=Genbank:WP_012735121.1;Name=WP_012735121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735121.1;locus_tag=NIV78_RS05355;product=dihydrodipicolinate synthase family protein;protein_id=WP_012735121.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1153759 1154274 . - . ID=gene-NIV78_RS05360;Name=NIV78_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05360 NZ_CP100136.1 Protein Homology CDS 1153759 1154274 . - 0 ID=cds-WP_012735122.1;Parent=gene-NIV78_RS05360;Dbxref=Genbank:WP_012735122.1;Name=WP_012735122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423207.1;locus_tag=NIV78_RS05360;product=DUF6190 family protein;protein_id=WP_012735122.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1154267 1155460 . - . ID=gene-NIV78_RS05365;Name=NIV78_RS05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05365 NZ_CP100136.1 Protein Homology CDS 1154267 1155460 . - 0 ID=cds-WP_012735123.1;Parent=gene-NIV78_RS05365;Dbxref=Genbank:WP_012735123.1;Name=WP_012735123.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735123.1;locus_tag=NIV78_RS05365;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_012735123.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1155909 1156385 . - . ID=gene-NIV78_RS05370;Name=NIV78_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05370 NZ_CP100136.1 Protein Homology CDS 1155909 1156385 . - 0 ID=cds-WP_012735124.1;Parent=gene-NIV78_RS05370;Dbxref=Genbank:WP_012735124.1;Name=WP_012735124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735124.1;locus_tag=NIV78_RS05370;product=cupin domain-containing protein;protein_id=WP_012735124.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1156416 1157453 . - . ID=gene-NIV78_RS05375;Name=NIV78_RS05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05375 NZ_CP100136.1 Protein Homology CDS 1156416 1157453 . - 0 ID=cds-WP_012735125.1;Parent=gene-NIV78_RS05375;Dbxref=Genbank:WP_012735125.1;Name=WP_012735125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735125.1;locus_tag=NIV78_RS05375;product=aromatic ring-hydroxylating dioxygenase subunit alpha;protein_id=WP_012735125.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1158954 1159679 . + . ID=gene-NIV78_RS05380;Name=NIV78_RS05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05380 NZ_CP100136.1 Protein Homology CDS 1158954 1159679 . + 0 ID=cds-WP_257757258.1;Parent=gene-NIV78_RS05380;Dbxref=Genbank:WP_257757258.1;Name=WP_257757258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735126.1;locus_tag=NIV78_RS05380;product=LuxR family transcriptional regulator;protein_id=WP_257757258.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1159705 1160817 . - . ID=gene-NIV78_RS05385;Name=NIV78_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05385 NZ_CP100136.1 Protein Homology CDS 1159705 1160817 . - 0 ID=cds-WP_012735127.1;Parent=gene-NIV78_RS05385;Dbxref=Genbank:WP_012735127.1;Name=WP_012735127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735127.1;locus_tag=NIV78_RS05385;product=hypothetical protein;protein_id=WP_012735127.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1160897 1161523 . - . ID=gene-NIV78_RS05390;Name=NIV78_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05390 NZ_CP100136.1 Protein Homology CDS 1160897 1161523 . - 0 ID=cds-WP_017923876.1;Parent=gene-NIV78_RS05390;Dbxref=Genbank:WP_017923876.1;Name=WP_017923876.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735128.1;locus_tag=NIV78_RS05390;product=glutathione S-transferase N-terminal domain-containing protein;protein_id=WP_017923876.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1161884 1162435 . + . ID=gene-NIV78_RS05395;Name=NIV78_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05395 NZ_CP100136.1 Protein Homology CDS 1161884 1162435 . + 0 ID=cds-WP_012735129.1;Parent=gene-NIV78_RS05395;Dbxref=Genbank:WP_012735129.1;Name=WP_012735129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735129.1;locus_tag=NIV78_RS05395;product=peptidoglycan domain-containing protein;protein_id=WP_012735129.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1162432 1163031 . + . ID=gene-NIV78_RS05400;Name=NIV78_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05400 NZ_CP100136.1 Protein Homology CDS 1162432 1163031 . + 0 ID=cds-WP_012735130.1;Parent=gene-NIV78_RS05400;Dbxref=Genbank:WP_012735130.1;Name=WP_012735130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735130.1;locus_tag=NIV78_RS05400;product=hypothetical protein;protein_id=WP_012735130.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1163102 1163434 . - . ID=gene-NIV78_RS05405;Name=NIV78_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05405 NZ_CP100136.1 Protein Homology CDS 1163102 1163434 . - 0 ID=cds-WP_012735131.1;Parent=gene-NIV78_RS05405;Dbxref=Genbank:WP_012735131.1;Name=WP_012735131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017452674.1;locus_tag=NIV78_RS05405;product=hypothetical protein;protein_id=WP_012735131.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1163431 1165299 . - . ID=gene-NIV78_RS05410;Name=NIV78_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05410 NZ_CP100136.1 Protein Homology CDS 1163431 1165299 . - 0 ID=cds-WP_100556505.1;Parent=gene-NIV78_RS05410;Dbxref=Genbank:WP_100556505.1;Name=WP_100556505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735132.1;locus_tag=NIV78_RS05410;product=ferrous iron transporter B;protein_id=WP_100556505.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1165296 1165616 . - . ID=gene-NIV78_RS05415;Name=NIV78_RS05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05415 NZ_CP100136.1 Protein Homology CDS 1165296 1165616 . - 0 ID=cds-WP_232252273.1;Parent=gene-NIV78_RS05415;Dbxref=Genbank:WP_232252273.1;Name=WP_232252273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011871000.1;locus_tag=NIV78_RS05415;product=FeoA domain-containing protein;protein_id=WP_232252273.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1165765 1166490 . - . ID=gene-NIV78_RS05420;Name=NIV78_RS05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05420 NZ_CP100136.1 Protein Homology CDS 1165765 1166490 . - 0 ID=cds-WP_012735134.1;Parent=gene-NIV78_RS05420;Dbxref=Genbank:WP_012735134.1;Name=WP_012735134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735134.1;locus_tag=NIV78_RS05420;product=GGDEF domain-containing protein;protein_id=WP_012735134.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1166500 1166886 . - . ID=gene-NIV78_RS05425;Name=NIV78_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05425 NZ_CP100136.1 Protein Homology CDS 1166500 1166886 . - 0 ID=cds-WP_012735135.1;Parent=gene-NIV78_RS05425;Dbxref=Genbank:WP_012735135.1;Name=WP_012735135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735135.1;locus_tag=NIV78_RS05425;product=DUF1987 domain-containing protein;protein_id=WP_012735135.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1166910 1167473 . - . ID=gene-NIV78_RS05430;Name=NIV78_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05430 NZ_CP100136.1 Protein Homology CDS 1166910 1167473 . - 0 ID=cds-WP_012735136.1;Parent=gene-NIV78_RS05430;Dbxref=Genbank:WP_012735136.1;Name=WP_012735136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008345892.1;locus_tag=NIV78_RS05430;product=SiaB family protein kinase;protein_id=WP_012735136.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1167486 1168601 . - . ID=gene-NIV78_RS05435;Name=NIV78_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05435 NZ_CP100136.1 Protein Homology CDS 1167486 1168601 . - 0 ID=cds-WP_043227072.1;Parent=gene-NIV78_RS05435;Dbxref=Genbank:WP_043227072.1;Name=WP_043227072.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018423979.1;locus_tag=NIV78_RS05435;product=SpoIIE family protein phosphatase;protein_id=WP_043227072.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1169846 1173592 . + . ID=gene-NIV78_RS05440;Name=NIV78_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05440 NZ_CP100136.1 Protein Homology CDS 1169846 1173592 . + 0 ID=cds-WP_257757388.1;Parent=gene-NIV78_RS05440;Dbxref=Genbank:WP_257757388.1;Name=WP_257757388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735138.1;locus_tag=NIV78_RS05440;product=ATP-binding protein;protein_id=WP_257757388.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1173696 1174013 . - . ID=gene-NIV78_RS05445;Name=NIV78_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05445 NZ_CP100136.1 Protein Homology CDS 1173696 1174013 . - 0 ID=cds-WP_012735139.1;Parent=gene-NIV78_RS05445;Dbxref=Genbank:WP_012735139.1;Name=WP_012735139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735139.1;locus_tag=NIV78_RS05445;product=hypothetical protein;protein_id=WP_012735139.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1174348 1175889 . + . ID=gene-NIV78_RS05450;Name=NIV78_RS05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05450 NZ_CP100136.1 Protein Homology CDS 1174348 1175889 . + 0 ID=cds-WP_100556502.1;Parent=gene-NIV78_RS05450;Dbxref=Genbank:WP_100556502.1;Name=WP_100556502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735140.1;locus_tag=NIV78_RS05450;product=class I SAM-dependent methyltransferase;protein_id=WP_100556502.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1176049 1177551 . + . ID=gene-NIV78_RS05455;Name=NIV78_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05455 NZ_CP100136.1 Protein Homology CDS 1176049 1177551 . + 0 ID=cds-WP_017924492.1;Parent=gene-NIV78_RS05455;Dbxref=Genbank:WP_017924492.1;Name=WP_017924492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425041.1;locus_tag=NIV78_RS05455;product=MFS transporter;protein_id=WP_017924492.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1177776 1178972 . + . ID=gene-NIV78_RS05460;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=NIV78_RS05460 NZ_CP100136.1 Protein Homology CDS 1177776 1178972 . + 0 ID=cds-WP_251118778.1;Parent=gene-NIV78_RS05460;Dbxref=Genbank:WP_251118778.1;Name=WP_251118778.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735142.1;locus_tag=NIV78_RS05460;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_251118778.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1179013 1180560 . - . ID=gene-NIV78_RS05465;Name=NIV78_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05465 NZ_CP100136.1 Protein Homology CDS 1179013 1180560 . - 0 ID=cds-WP_257757261.1;Parent=gene-NIV78_RS05465;Dbxref=Genbank:WP_257757261.1;Name=WP_257757261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735143.1;locus_tag=NIV78_RS05465;product=glycosyltransferase family 2 protein;protein_id=WP_257757261.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1180557 1181162 . - . ID=gene-NIV78_RS05470;Name=NIV78_RS05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05470 NZ_CP100136.1 Protein Homology CDS 1180557 1181162 . - 0 ID=cds-WP_017923985.1;Parent=gene-NIV78_RS05470;Dbxref=Genbank:WP_017923985.1;Name=WP_017923985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006047364.1;locus_tag=NIV78_RS05470;product=cytochrome b;protein_id=WP_017923985.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1181473 1182290 . - . ID=gene-NIV78_RS05475;Name=NIV78_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05475 NZ_CP100136.1 Protein Homology CDS 1181942 1182290 . - 0 ID=cds-WP_085962451.1;Parent=gene-NIV78_RS05475;Dbxref=Genbank:WP_085962451.1;Name=WP_085962451.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS05475;product=IS5 family transposase;protein_id=WP_085962451.1;transl_table=11 NZ_CP100136.1 Protein Homology CDS 1181473 1181942 . - 2 ID=cds-WP_085962451.1;Parent=gene-NIV78_RS05475;Dbxref=Genbank:WP_085962451.1;Name=WP_085962451.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS05475;product=IS5 family transposase;protein_id=WP_085962451.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1182378 1182827 . - . ID=gene-NIV78_RS05480;Name=NIV78_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05480 NZ_CP100136.1 Protein Homology CDS 1182378 1182827 . - 0 ID=cds-WP_230674574.1;Parent=gene-NIV78_RS05480;Dbxref=Genbank:WP_230674574.1;Name=WP_230674574.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024698.2;locus_tag=NIV78_RS05480;product=GNAT family N-acetyltransferase;protein_id=WP_230674574.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1183052 1183459 . - . ID=gene-NIV78_RS05485;Name=NIV78_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05485 NZ_CP100136.1 Protein Homology CDS 1183052 1183459 . - 0 ID=cds-WP_035984571.1;Parent=gene-NIV78_RS05485;Dbxref=Genbank:WP_035984571.1;Name=WP_035984571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735145.1;locus_tag=NIV78_RS05485;product=PRC-barrel domain-containing protein;protein_id=WP_035984571.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1184365 1185630 . + . ID=gene-NIV78_RS05490;Name=NIV78_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05490 NZ_CP100136.1 Protein Homology CDS 1184365 1185630 . + 0 ID=cds-WP_257757262.1;Parent=gene-NIV78_RS05490;Dbxref=Genbank:WP_257757262.1;Name=WP_257757262.1;Ontology_term=GO:0006303,GO:0045027;gbkey=CDS;go_function=DNA end binding|0045027||IEA;go_process=double-strand break repair via nonhomologous end joining|0006303||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735146.1;locus_tag=NIV78_RS05490;product=Ku protein;protein_id=WP_257757262.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1185650 1188367 . + . ID=gene-NIV78_RS05495;Name=ligD;gbkey=Gene;gene=ligD;gene_biotype=protein_coding;locus_tag=NIV78_RS05495 NZ_CP100136.1 Protein Homology CDS 1185650 1188367 . + 0 ID=cds-WP_124836709.1;Parent=gene-NIV78_RS05495;Dbxref=Genbank:WP_124836709.1;Name=WP_124836709.1;Ontology_term=GO:0006303;gbkey=CDS;gene=ligD;go_process=double-strand break repair via nonhomologous end joining|0006303||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735147.1;locus_tag=NIV78_RS05495;product=DNA ligase D;protein_id=WP_124836709.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1188464 1189075 . + . ID=gene-NIV78_RS05500;Name=NIV78_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05500 NZ_CP100136.1 Protein Homology CDS 1188464 1189075 . + 0 ID=cds-WP_257757263.1;Parent=gene-NIV78_RS05500;Dbxref=Genbank:WP_257757263.1;Name=WP_257757263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735148.1;locus_tag=NIV78_RS05500;product=TetR/AcrR family transcriptional regulator;protein_id=WP_257757263.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1189418 1189801 . + . ID=gene-NIV78_RS05505;Name=NIV78_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05505 NZ_CP100136.1 Protein Homology CDS 1189418 1189801 . + 0 ID=cds-WP_012735149.1;Parent=gene-NIV78_RS05505;Dbxref=Genbank:WP_012735149.1;Name=WP_012735149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735149.1;locus_tag=NIV78_RS05505;product=VOC family protein;protein_id=WP_012735149.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1189925 1190590 . + . ID=gene-NIV78_RS05510;Name=NIV78_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05510 NZ_CP100136.1 Protein Homology CDS 1189925 1190590 . + 0 ID=cds-WP_017924311.1;Parent=gene-NIV78_RS05510;Dbxref=Genbank:WP_017924311.1;Name=WP_017924311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735150.1;locus_tag=NIV78_RS05510;product=class I SAM-dependent methyltransferase;protein_id=WP_017924311.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1190644 1191510 . - . ID=gene-NIV78_RS05515;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=NIV78_RS05515 NZ_CP100136.1 Protein Homology CDS 1190644 1191510 . - 0 ID=cds-WP_017924312.1;Parent=gene-NIV78_RS05515;Dbxref=Genbank:WP_017924312.1;Name=WP_017924312.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425370.1;locus_tag=NIV78_RS05515;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=WP_017924312.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1191928 1192941 . + . ID=gene-NIV78_RS05520;Name=NIV78_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05520 NZ_CP100136.1 Protein Homology CDS 1191928 1192941 . + 0 ID=cds-WP_017924265.1;Parent=gene-NIV78_RS05520;Dbxref=Genbank:WP_017924265.1;Name=WP_017924265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697274.1;locus_tag=NIV78_RS05520;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_017924265.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1193000 1194511 . - . ID=gene-NIV78_RS05525;Name=NIV78_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05525 NZ_CP100136.1 Protein Homology CDS 1193000 1194511 . - 0 ID=cds-WP_124836706.1;Parent=gene-NIV78_RS05525;Dbxref=Genbank:WP_124836706.1;Name=WP_124836706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017773946.1;locus_tag=NIV78_RS05525;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;protein_id=WP_124836706.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1194630 1195586 . + . ID=gene-NIV78_RS05530;Name=NIV78_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05530 NZ_CP100136.1 Protein Homology CDS 1194630 1195586 . + 0 ID=cds-WP_017425369.1;Parent=gene-NIV78_RS05530;Dbxref=Genbank:WP_017425369.1;Name=WP_017425369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735154.1;locus_tag=NIV78_RS05530;product=LysR family transcriptional regulator;protein_id=WP_017425369.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1195730 1198306 . - . ID=gene-NIV78_RS05535;Name=NIV78_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05535 NZ_CP100136.1 Protein Homology CDS 1195730 1198306 . - 0 ID=cds-WP_124836705.1;Parent=gene-NIV78_RS05535;Dbxref=Genbank:WP_124836705.1;Name=WP_124836705.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697279.1;locus_tag=NIV78_RS05535;product=mechanosensitive ion channel;protein_id=WP_124836705.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1198785 1199690 . + . ID=gene-NIV78_RS05540;Name=NIV78_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05540 NZ_CP100136.1 Protein Homology CDS 1198785 1199690 . + 0 ID=cds-WP_124836704.1;Parent=gene-NIV78_RS05540;Dbxref=Genbank:WP_124836704.1;Name=WP_124836704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735156.1;locus_tag=NIV78_RS05540;product=LysR family transcriptional regulator;protein_id=WP_124836704.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1199986 1201299 . + . ID=gene-NIV78_RS05545;Name=NIV78_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05545 NZ_CP100136.1 Protein Homology CDS 1199986 1201299 . + 0 ID=cds-WP_012735157.1;Parent=gene-NIV78_RS05545;Dbxref=Genbank:WP_012735157.1;Name=WP_012735157.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600234.1;locus_tag=NIV78_RS05545;product=Nramp family divalent metal transporter;protein_id=WP_012735157.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1201462 1202586 . + . ID=gene-NIV78_RS05550;Name=NIV78_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05550 NZ_CP100136.1 Protein Homology CDS 1201462 1202586 . + 0 ID=cds-WP_124836703.1;Parent=gene-NIV78_RS05550;Dbxref=Genbank:WP_124836703.1;Name=WP_124836703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735158.1;locus_tag=NIV78_RS05550;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_124836703.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1203035 1203478 . - . ID=gene-NIV78_RS05555;Name=NIV78_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05555 NZ_CP100136.1 Protein Homology CDS 1203035 1203478 . - 0 ID=cds-WP_012735159.1;Parent=gene-NIV78_RS05555;Dbxref=Genbank:WP_012735159.1;Name=WP_012735159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697316.1;locus_tag=NIV78_RS05555;product=DUF2471 family protein;protein_id=WP_012735159.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1203896 1204576 . + . ID=gene-NIV78_RS05560;Name=NIV78_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05560 NZ_CP100136.1 Protein Homology CDS 1203896 1204576 . + 0 ID=cds-WP_017924185.1;Parent=gene-NIV78_RS05560;Dbxref=Genbank:WP_017924185.1;Name=WP_017924185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735160.1;locus_tag=NIV78_RS05560;product=flavin reductase family protein;protein_id=WP_017924185.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1204604 1204972 . - . ID=gene-NIV78_RS05565;Name=NIV78_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05565 NZ_CP100136.1 Protein Homology CDS 1204604 1204972 . - 0 ID=cds-WP_012735161.1;Parent=gene-NIV78_RS05565;Dbxref=Genbank:WP_012735161.1;Name=WP_012735161.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735161.1;locus_tag=NIV78_RS05565;product=NUDIX domain-containing protein;protein_id=WP_012735161.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1205080 1205763 . - . ID=gene-NIV78_RS05570;Name=NIV78_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05570 NZ_CP100136.1 Protein Homology CDS 1205080 1205763 . - 0 ID=cds-WP_257757267.1;Parent=gene-NIV78_RS05570;Dbxref=Genbank:WP_257757267.1;Name=WP_257757267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006048104.1;locus_tag=NIV78_RS05570;product=HAD-IB family hydrolase;protein_id=WP_257757267.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1206016 1206756 . - . ID=gene-NIV78_RS05575;Name=NIV78_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05575 NZ_CP100136.1 Protein Homology CDS 1206016 1206756 . - 0 ID=cds-WP_257757390.1;Parent=gene-NIV78_RS05575;Dbxref=Genbank:WP_257757390.1;Name=WP_257757390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735163.1;locus_tag=NIV78_RS05575;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_257757390.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1207160 1207735 . - . ID=gene-NIV78_RS05580;Name=NIV78_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05580 NZ_CP100136.1 Protein Homology CDS 1207160 1207735 . - 0 ID=cds-WP_012735164.1;Parent=gene-NIV78_RS05580;Dbxref=Genbank:WP_012735164.1;Name=WP_012735164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735164.1;locus_tag=NIV78_RS05580;product=flavin reductase family protein;protein_id=WP_012735164.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1207983 1208315 . + . ID=gene-NIV78_RS05585;Name=NIV78_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05585 NZ_CP100136.1 Protein Homology CDS 1207983 1208315 . + 0 ID=cds-WP_012735165.1;Parent=gene-NIV78_RS05585;Dbxref=Genbank:WP_012735165.1;Name=WP_012735165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735165.1;locus_tag=NIV78_RS05585;product=DUF2322 family protein;protein_id=WP_012735165.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1208396 1209136 . - . ID=gene-NIV78_RS05590;Name=NIV78_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05590 NZ_CP100136.1 Protein Homology CDS 1208396 1209136 . - 0 ID=cds-WP_012735166.1;Parent=gene-NIV78_RS05590;Dbxref=Genbank:WP_012735166.1;Name=WP_012735166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735166.1;locus_tag=NIV78_RS05590;product=HAD family phosphatase;protein_id=WP_012735166.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1209986 1211284 . - . ID=gene-NIV78_RS05595;Name=NIV78_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05595 NZ_CP100136.1 Protein Homology CDS 1209986 1211284 . - 0 ID=cds-WP_257757268.1;Parent=gene-NIV78_RS05595;Dbxref=Genbank:WP_257757268.1;Name=WP_257757268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735167.1;locus_tag=NIV78_RS05595;product=DUF2242 domain-containing protein;protein_id=WP_257757268.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1211514 1211966 . - . ID=gene-NIV78_RS05600;Name=NIV78_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05600 NZ_CP100136.1 Protein Homology CDS 1211514 1211966 . - 0 ID=cds-WP_257757270.1;Parent=gene-NIV78_RS05600;Dbxref=Genbank:WP_257757270.1;Name=WP_257757270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735168.1;locus_tag=NIV78_RS05600;product=Hsp20/alpha crystallin family protein;protein_id=WP_257757270.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1211998 1212438 . - . ID=gene-NIV78_RS05605;Name=NIV78_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05605 NZ_CP100136.1 Protein Homology CDS 1211998 1212438 . - 0 ID=cds-WP_012735169.1;Parent=gene-NIV78_RS05605;Dbxref=Genbank:WP_012735169.1;Name=WP_012735169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751146.1;locus_tag=NIV78_RS05605;product=Hsp20/alpha crystallin family protein;protein_id=WP_012735169.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1213053 1214918 . + . ID=gene-NIV78_RS05610;Name=NIV78_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05610 NZ_CP100136.1 Protein Homology CDS 1213053 1214918 . + 0 ID=cds-WP_017923887.1;Parent=gene-NIV78_RS05610;Dbxref=Genbank:WP_017923887.1;Name=WP_017923887.1;Ontology_term=GO:0006094,GO:0004611,GO:0005525,GO:0017076;gbkey=CDS;go_function=phosphoenolpyruvate carboxykinase activity|0004611||IEA,GTP binding|0005525||IEA,purine nucleotide binding|0017076||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009911895.1;locus_tag=NIV78_RS05610;product=phosphoenolpyruvate carboxykinase (GTP);protein_id=WP_017923887.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1215106 1216026 . + . ID=gene-NIV78_RS05615;Name=NIV78_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05615 NZ_CP100136.1 Protein Homology CDS 1215106 1216026 . + 0 ID=cds-WP_017425354.1;Parent=gene-NIV78_RS05615;Dbxref=Genbank:WP_017425354.1;Name=WP_017425354.1;Ontology_term=GO:0006631,GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004553996.1;locus_tag=NIV78_RS05615;product=3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein;protein_id=WP_017425354.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1216200 1217048 . - . ID=gene-NIV78_RS05620;Name=NIV78_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05620 NZ_CP100136.1 Protein Homology CDS 1216200 1217048 . - 0 ID=cds-WP_012735172.1;Parent=gene-NIV78_RS05620;Dbxref=Genbank:WP_012735172.1;Name=WP_012735172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004550662.1;locus_tag=NIV78_RS05620;product=LysR family transcriptional regulator;protein_id=WP_012735172.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1217301 1218947 . + . ID=gene-NIV78_RS05625;Name=mdcA;gbkey=Gene;gene=mdcA;gene_biotype=protein_coding;locus_tag=NIV78_RS05625 NZ_CP100136.1 Protein Homology CDS 1217301 1218947 . + 0 ID=cds-WP_012735173.1;Parent=gene-NIV78_RS05625;Dbxref=Genbank:WP_012735173.1;Name=WP_012735173.1;Ontology_term=GO:0006810,GO:0015451;gbkey=CDS;gene=mdcA;go_function=decarboxylation-driven active transmembrane transporter activity|0015451||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764672.1;locus_tag=NIV78_RS05625;product=malonate decarboxylase subunit alpha;protein_id=WP_012735173.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1219043 1219360 . + . ID=gene-NIV78_RS05630;Name=mdcC;gbkey=Gene;gene=mdcC;gene_biotype=protein_coding;locus_tag=NIV78_RS05630 NZ_CP100136.1 Protein Homology CDS 1219043 1219360 . + 0 ID=cds-WP_012735174.1;Parent=gene-NIV78_RS05630;Dbxref=Genbank:WP_012735174.1;Name=WP_012735174.1;gbkey=CDS;gene=mdcC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004534559.1;locus_tag=NIV78_RS05630;product=malonate decarboxylase acyl carrier protein;protein_id=WP_012735174.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1219357 1220271 . + . ID=gene-NIV78_RS05635;Name=NIV78_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05635 NZ_CP100136.1 Protein Homology CDS 1219357 1220271 . + 0 ID=cds-WP_017923965.1;Parent=gene-NIV78_RS05635;Dbxref=Genbank:WP_017923965.1;Name=WP_017923965.1;Ontology_term=GO:0006633,GO:0044262,GO:0003989,GO:0016831,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,carboxy-lyase activity|0016831||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,cellular carbohydrate metabolic process|0044262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735175.1;locus_tag=NIV78_RS05635;product=biotin-independent malonate decarboxylase subunit beta;protein_id=WP_017923965.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1220268 1220984 . + . ID=gene-NIV78_RS05640;Name=NIV78_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05640 NZ_CP100136.1 Protein Homology CDS 1220268 1220984 . + 0 ID=cds-WP_012735176.1;Parent=gene-NIV78_RS05640;Dbxref=Genbank:WP_012735176.1;Name=WP_012735176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697342.1;locus_tag=NIV78_RS05640;product=malonate decarboxylase subunit gamma;protein_id=WP_012735176.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1220959 1221687 . + . ID=gene-NIV78_RS05645;Name=mdcG;gbkey=Gene;gene=mdcG;gene_biotype=protein_coding;locus_tag=NIV78_RS05645 NZ_CP100136.1 Protein Homology CDS 1220959 1221687 . + 0 ID=cds-WP_251107300.1;Parent=gene-NIV78_RS05645;Dbxref=Genbank:WP_251107300.1;Name=WP_251107300.1;Ontology_term=GO:0051191;gbkey=CDS;gene=mdcG;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735177.1;locus_tag=NIV78_RS05645;product=malonate decarboxylase holo-[acyl-carrier-protein] synthase;protein_id=WP_251107300.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1221684 1222679 . + . ID=gene-NIV78_RS05650;Name=NIV78_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05650 NZ_CP100136.1 Protein Homology CDS 1221684 1222679 . + 0 ID=cds-WP_124836700.1;Parent=gene-NIV78_RS05650;Dbxref=Genbank:WP_124836700.1;Name=WP_124836700.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735178.1;locus_tag=NIV78_RS05650;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WP_124836700.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1222676 1223617 . + . ID=gene-NIV78_RS05655;Name=NIV78_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05655 NZ_CP100136.1 Protein Homology CDS 1222676 1223617 . + 0 ID=cds-WP_161521391.1;Parent=gene-NIV78_RS05655;Dbxref=Genbank:WP_161521391.1;Name=WP_161521391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897449.1;locus_tag=NIV78_RS05655;product=acyltransferase domain-containing protein;protein_id=WP_161521391.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1223754 1224287 . + . ID=gene-NIV78_RS05660;Name=NIV78_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05660 NZ_CP100136.1 Protein Homology CDS 1223754 1224287 . + 0 ID=cds-WP_012735180.1;Parent=gene-NIV78_RS05660;Dbxref=Genbank:WP_012735180.1;Name=WP_012735180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408699.1;locus_tag=NIV78_RS05660;product=hypothetical protein;protein_id=WP_012735180.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1224576 1225424 . + . ID=gene-NIV78_RS05665;Name=NIV78_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05665 NZ_CP100136.1 Protein Homology CDS 1224576 1225424 . + 0 ID=cds-WP_100556177.1;Parent=gene-NIV78_RS05665;Dbxref=Genbank:WP_100556177.1;Name=WP_100556177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735181.1;locus_tag=NIV78_RS05665;product=alpha/beta hydrolase;protein_id=WP_100556177.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1225504 1226133 . + . ID=gene-NIV78_RS05670;Name=NIV78_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05670 NZ_CP100136.1 Protein Homology CDS 1225504 1226133 . + 0 ID=cds-WP_012735182.1;Parent=gene-NIV78_RS05670;Dbxref=Genbank:WP_012735182.1;Name=WP_012735182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735182.1;locus_tag=NIV78_RS05670;product=glutathione S-transferase;protein_id=WP_012735182.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1226301 1226501 . + . ID=gene-NIV78_RS05675;Name=NIV78_RS05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05675 NZ_CP100136.1 Protein Homology CDS 1226301 1226501 . + 0 ID=cds-WP_017924707.1;Parent=gene-NIV78_RS05675;Dbxref=Genbank:WP_017924707.1;Name=WP_017924707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735183.1;locus_tag=NIV78_RS05675;product=hypothetical protein;protein_id=WP_017924707.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1226686 1228167 . - . ID=gene-NIV78_RS05680;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=NIV78_RS05680 NZ_CP100136.1 Protein Homology CDS 1226686 1228167 . - 0 ID=cds-WP_012735184.1;Parent=gene-NIV78_RS05680;Dbxref=Genbank:WP_012735184.1;Name=WP_012735184.1;Ontology_term=GO:0055085,GO:0022857,GO:0016021;gbkey=CDS;gene=proP;go_component=integral component of membrane|0016021||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735184.1;locus_tag=NIV78_RS05680;product=glycine betaine/L-proline transporter ProP;protein_id=WP_012735184.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1228771 1229103 . + . ID=gene-NIV78_RS05685;Name=NIV78_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05685 NZ_CP100136.1 Protein Homology CDS 1228771 1229103 . + 0 ID=cds-WP_017924380.1;Parent=gene-NIV78_RS05685;Dbxref=Genbank:WP_017924380.1;Name=WP_017924380.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401062.1;locus_tag=NIV78_RS05685;product=YnfA family protein;protein_id=WP_017924380.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1229172 1229894 . - . ID=gene-NIV78_RS05690;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=NIV78_RS05690 NZ_CP100136.1 Protein Homology CDS 1229172 1229894 . - 0 ID=cds-WP_017923746.1;Parent=gene-NIV78_RS05690;Dbxref=Genbank:WP_017923746.1;Name=WP_017923746.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697352.1;locus_tag=NIV78_RS05690;product=DNA polymerase III subunit epsilon;protein_id=WP_017923746.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1230005 1230454 . - . ID=gene-NIV78_RS05695;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=NIV78_RS05695 NZ_CP100136.1 Protein Homology CDS 1230005 1230454 . - 0 ID=cds-WP_012735187.1;Parent=gene-NIV78_RS05695;Dbxref=Genbank:WP_012735187.1;Name=WP_012735187.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735187.1;locus_tag=NIV78_RS05695;product=ribonuclease HI;protein_id=WP_012735187.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1230451 1231263 . - . ID=gene-NIV78_RS05700;Name=NIV78_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05700 NZ_CP100136.1 Protein Homology CDS 1230451 1231263 . - 0 ID=cds-WP_012735188.1;Parent=gene-NIV78_RS05700;Dbxref=Genbank:WP_012735188.1;Name=WP_012735188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004556858.1;locus_tag=NIV78_RS05700;product=class I SAM-dependent methyltransferase;protein_id=WP_012735188.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1231282 1232088 . + . ID=gene-NIV78_RS05705;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=NIV78_RS05705 NZ_CP100136.1 Protein Homology CDS 1231282 1232088 . + 0 ID=cds-WP_017923747.1;Parent=gene-NIV78_RS05705;Dbxref=Genbank:WP_017923747.1;Name=WP_017923747.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600438.1;locus_tag=NIV78_RS05705;product=hydroxyacylglutathione hydrolase;protein_id=WP_017923747.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1232357 1233964 . + . ID=gene-NIV78_RS05710;Name=NIV78_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05710 NZ_CP100136.1 Protein Homology CDS 1232357 1233964 . + 0 ID=cds-WP_012735190.1;Parent=gene-NIV78_RS05710;Dbxref=Genbank:WP_012735190.1;Name=WP_012735190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417355.1;locus_tag=NIV78_RS05710;product=transglycosylase SLT domain-containing protein;protein_id=WP_012735190.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1234112 1235341 . + . ID=gene-NIV78_RS05715;Name=NIV78_RS05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05715 NZ_CP100136.1 Protein Homology CDS 1234112 1235341 . + 0 ID=cds-WP_012735191.1;Parent=gene-NIV78_RS05715;Dbxref=Genbank:WP_012735191.1;Name=WP_012735191.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735191.1;locus_tag=NIV78_RS05715;product=MFS transporter;protein_id=WP_012735191.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1235766 1236908 . + . ID=gene-NIV78_RS05720;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=NIV78_RS05720 NZ_CP100136.1 Protein Homology CDS 1235766 1236908 . + 0 ID=cds-WP_012735192.1;Parent=gene-NIV78_RS05720;Dbxref=Genbank:WP_012735192.1;Name=WP_012735192.1;Ontology_term=GO:0009220,GO:0004088,GO:0005951;gbkey=CDS;gene=carA;go_component=carbamoyl-phosphate synthase complex|0005951||IEA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735192.1;locus_tag=NIV78_RS05720;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_012735192.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1236931 1237587 . + . ID=gene-NIV78_RS05725;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=NIV78_RS05725 NZ_CP100136.1 Protein Homology CDS 1236931 1237587 . + 0 ID=cds-WP_017923213.1;Parent=gene-NIV78_RS05725;Dbxref=Genbank:WP_017923213.1;Name=WP_017923213.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735193.1;locus_tag=NIV78_RS05725;product=leucine efflux protein LeuE;protein_id=WP_017923213.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1237639 1240893 . + . ID=gene-NIV78_RS05730;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=NIV78_RS05730 NZ_CP100136.1 Protein Homology CDS 1237639 1240893 . + 0 ID=cds-WP_017923214.1;Parent=gene-NIV78_RS05730;Dbxref=Genbank:WP_017923214.1;Name=WP_017923214.1;Ontology_term=GO:0006807,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193866.1;locus_tag=NIV78_RS05730;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_017923214.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1241012 1241488 . + . ID=gene-NIV78_RS05735;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=NIV78_RS05735 NZ_CP100136.1 Protein Homology CDS 1241012 1241488 . + 0 ID=cds-WP_012735195.1;Parent=gene-NIV78_RS05735;Dbxref=Genbank:WP_012735195.1;Name=WP_012735195.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004534614.1;locus_tag=NIV78_RS05735;product=transcription elongation factor GreA;protein_id=WP_012735195.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1241500 1241988 . + . ID=gene-NIV78_RS05740;Name=NIV78_RS05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05740 NZ_CP100136.1 Protein Homology CDS 1241500 1241988 . + 0 ID=cds-WP_012735196.1;Parent=gene-NIV78_RS05740;Dbxref=Genbank:WP_012735196.1;Name=WP_012735196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735196.1;locus_tag=NIV78_RS05740;product=DUF4149 domain-containing protein;protein_id=WP_012735196.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1242037 1242582 . - . ID=gene-NIV78_RS05745;Name=NIV78_RS05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05745 NZ_CP100136.1 Protein Homology CDS 1242037 1242582 . - 0 ID=cds-WP_012735197.1;Parent=gene-NIV78_RS05745;Dbxref=Genbank:WP_012735197.1;Name=WP_012735197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193985.1;locus_tag=NIV78_RS05745;product=YhbY family RNA-binding protein;protein_id=WP_012735197.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1242798 1243460 . + . ID=gene-NIV78_RS05750;Name=NIV78_RS05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05750 NZ_CP100136.1 Protein Homology CDS 1242798 1243460 . + 0 ID=cds-WP_012735198.1;Parent=gene-NIV78_RS05750;Dbxref=Genbank:WP_012735198.1;Name=WP_012735198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009911930.1;locus_tag=NIV78_RS05750;product=RlmE family RNA methyltransferase;protein_id=WP_012735198.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1243630 1245519 . + . ID=gene-NIV78_RS05755;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=NIV78_RS05755 NZ_CP100136.1 Protein Homology CDS 1243630 1245519 . + 0 ID=cds-WP_012735199.1;Parent=gene-NIV78_RS05755;Dbxref=Genbank:WP_012735199.1;Name=WP_012735199.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887;gbkey=CDS;gene=ftsH;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010102839.1;locus_tag=NIV78_RS05755;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_012735199.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1245632 1246495 . + . ID=gene-NIV78_RS05760;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=NIV78_RS05760 NZ_CP100136.1 Protein Homology CDS 1245632 1246495 . + 0 ID=cds-WP_017922635.1;Parent=gene-NIV78_RS05760;Dbxref=Genbank:WP_017922635.1;Name=WP_017922635.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735200.1;locus_tag=NIV78_RS05760;product=dihydropteroate synthase;protein_id=WP_017922635.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1246528 1247883 . + . ID=gene-NIV78_RS05765;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=NIV78_RS05765 NZ_CP100136.1 Protein Homology CDS 1246528 1247883 . + 0 ID=cds-WP_257757274.1;Parent=gene-NIV78_RS05765;Dbxref=Genbank:WP_257757274.1;Name=WP_257757274.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular transferase activity%2C phosphotransferases|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004542480.1;locus_tag=NIV78_RS05765;product=phosphoglucosamine mutase;protein_id=WP_257757274.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1248596 1249627 . + . ID=gene-NIV78_RS05770;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=NIV78_RS05770 NZ_CP100136.1 Protein Homology CDS 1248596 1249627 . + 0 ID=cds-WP_012735202.1;Parent=gene-NIV78_RS05770;Dbxref=Genbank:WP_012735202.1;Name=WP_012735202.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199345.1;locus_tag=NIV78_RS05770;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_012735202.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1249779 1250717 . + . ID=gene-NIV78_RS05775;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=NIV78_RS05775 NZ_CP100136.1 Protein Homology CDS 1249779 1250717 . + 0 ID=cds-WP_169512420.1;Parent=gene-NIV78_RS05775;Dbxref=Genbank:WP_169512420.1;Name=WP_169512420.1;Ontology_term=GO:0055085,GO:0016021;gbkey=CDS;gene=pstC;go_component=integral component of membrane|0016021||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009891904.1;locus_tag=NIV78_RS05775;product=phosphate ABC transporter permease PstC;protein_id=WP_169512420.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1250714 1251610 . + . ID=gene-NIV78_RS05780;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=NIV78_RS05780 NZ_CP100136.1 Protein Homology CDS 1250714 1251610 . + 0 ID=cds-WP_012735204.1;Parent=gene-NIV78_RS05780;Dbxref=Genbank:WP_012735204.1;Name=WP_012735204.1;Ontology_term=GO:0035435,GO:0005887;gbkey=CDS;gene=pstA;go_component=integral component of plasma membrane|0005887||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009906011.1;locus_tag=NIV78_RS05780;product=phosphate ABC transporter permease PstA;protein_id=WP_012735204.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1251626 1252474 . + . ID=gene-NIV78_RS05785;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=NIV78_RS05785 NZ_CP100136.1 Protein Homology CDS 1251626 1252474 . + 0 ID=cds-WP_012735205.1;Parent=gene-NIV78_RS05785;Dbxref=Genbank:WP_012735205.1;Name=WP_012735205.1;Ontology_term=GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401039.1;locus_tag=NIV78_RS05785;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_012735205.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1252491 1253195 . + . ID=gene-NIV78_RS05790;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=NIV78_RS05790 NZ_CP100136.1 Protein Homology CDS 1252491 1253195 . + 0 ID=cds-WP_012735206.1;Parent=gene-NIV78_RS05790;Dbxref=Genbank:WP_012735206.1;Name=WP_012735206.1;Ontology_term=GO:0051049,GO:0003700;gbkey=CDS;gene=phoU;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transport|0051049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351613.1;locus_tag=NIV78_RS05790;product=phosphate signaling complex protein PhoU;protein_id=WP_012735206.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1253229 1253930 . + . ID=gene-NIV78_RS05795;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=NIV78_RS05795 NZ_CP100136.1 Protein Homology CDS 1253229 1253930 . + 0 ID=cds-WP_026051494.1;Parent=gene-NIV78_RS05795;Dbxref=Genbank:WP_026051494.1;Name=WP_026051494.1;Ontology_term=GO:0000160,GO:0006355,GO:0006796,GO:0000156,GO:0003700;gbkey=CDS;gene=phoB;go_function=phosphorelay response regulator activity|0000156||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332664.1;locus_tag=NIV78_RS05795;product=phosphate regulon transcriptional regulator PhoB;protein_id=WP_026051494.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1253997 1255307 . + . ID=gene-NIV78_RS05800;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=NIV78_RS05800 NZ_CP100136.1 Protein Homology CDS 1253997 1255307 . + 0 ID=cds-WP_012735208.1;Parent=gene-NIV78_RS05800;Dbxref=Genbank:WP_012735208.1;Name=WP_012735208.1;Ontology_term=GO:0000160,GO:0006796,GO:0000155;gbkey=CDS;gene=phoR;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004534627.1;locus_tag=NIV78_RS05800;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_012735208.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1255432 1257495 . - . ID=gene-NIV78_RS05805;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=NIV78_RS05805 NZ_CP100136.1 Protein Homology CDS 1255432 1257495 . - 0 ID=cds-WP_012735209.1;Parent=gene-NIV78_RS05805;Dbxref=Genbank:WP_012735209.1;Name=WP_012735209.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735209.1;locus_tag=NIV78_RS05805;product=polyphosphate kinase 1;protein_id=WP_012735209.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1257849 1259363 . + . ID=gene-NIV78_RS05810;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=NIV78_RS05810 NZ_CP100136.1 Protein Homology CDS 1257849 1259363 . + 0 ID=cds-WP_012735210.1;Parent=gene-NIV78_RS05810;Dbxref=Genbank:WP_012735210.1;Name=WP_012735210.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009970405.1;locus_tag=NIV78_RS05810;product=exopolyphosphatase;protein_id=WP_012735210.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1259433 1259876 . - . ID=gene-NIV78_RS05815;Name=NIV78_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05815 NZ_CP100136.1 Protein Homology CDS 1259433 1259876 . - 0 ID=cds-WP_043225075.1;Parent=gene-NIV78_RS05815;Dbxref=Genbank:WP_043225075.1;Name=WP_043225075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735211.1;locus_tag=NIV78_RS05815;product=hypothetical protein;protein_id=WP_043225075.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1260044 1260445 . - . ID=gene-NIV78_RS05820;Name=NIV78_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05820 NZ_CP100136.1 Protein Homology CDS 1260044 1260445 . - 0 ID=cds-WP_012735212.1;Parent=gene-NIV78_RS05820;Dbxref=Genbank:WP_012735212.1;Name=WP_012735212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735212.1;locus_tag=NIV78_RS05820;product=hypothetical protein;protein_id=WP_012735212.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1260511 1262286 . - . ID=gene-NIV78_RS05825;Name=NIV78_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05825 NZ_CP100136.1 Protein Homology CDS 1260511 1262286 . - 0 ID=cds-WP_012735213.1;Parent=gene-NIV78_RS05825;Dbxref=Genbank:WP_012735213.1;Name=WP_012735213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735213.1;locus_tag=NIV78_RS05825;product=peptidase S10;protein_id=WP_012735213.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1262726 1263424 . - . ID=gene-NIV78_RS05830;Name=NIV78_RS05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05830 NZ_CP100136.1 Protein Homology CDS 1262726 1263424 . - 0 ID=cds-WP_251107302.1;Parent=gene-NIV78_RS05830;Dbxref=Genbank:WP_251107302.1;Name=WP_251107302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735214.1;locus_tag=NIV78_RS05830;product=DJ-1/PfpI family protein;protein_id=WP_251107302.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1263493 1263789 . - . ID=gene-NIV78_RS05835;Name=NIV78_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05835 NZ_CP100136.1 Protein Homology CDS 1263493 1263789 . - 0 ID=cds-WP_017923988.1;Parent=gene-NIV78_RS05835;Dbxref=Genbank:WP_017923988.1;Name=WP_017923988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425166.1;locus_tag=NIV78_RS05835;product=DUF1272 domain-containing protein;protein_id=WP_017923988.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1263991 1264929 . + . ID=gene-NIV78_RS05840;Name=NIV78_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05840 NZ_CP100136.1 Protein Homology CDS 1263991 1264929 . + 0 ID=cds-WP_012735216.1;Parent=gene-NIV78_RS05840;Dbxref=Genbank:WP_012735216.1;Name=WP_012735216.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735216.1;locus_tag=NIV78_RS05840;product=helix-turn-helix domain-containing protein;protein_id=WP_012735216.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1264961 1265284 . - . ID=gene-NIV78_RS05845;Name=NIV78_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05845 NZ_CP100136.1 Protein Homology CDS 1264961 1265284 . - 0 ID=cds-WP_017923989.1;Parent=gene-NIV78_RS05845;Dbxref=Genbank:WP_017923989.1;Name=WP_017923989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735217.1;locus_tag=NIV78_RS05845;product=hypothetical protein;protein_id=WP_017923989.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1265421 1265681 . + . ID=gene-NIV78_RS05850;Name=NIV78_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05850 NZ_CP100136.1 Protein Homology CDS 1265421 1265681 . + 0 ID=cds-WP_232734566.1;Parent=gene-NIV78_RS05850;Dbxref=Genbank:WP_232734566.1;Name=WP_232734566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425165.1;locus_tag=NIV78_RS05850;product=hypothetical protein;protein_id=WP_232734566.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1265760 1266128 . + . ID=gene-NIV78_RS05855;Name=NIV78_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05855 NZ_CP100136.1 Protein Homology CDS 1265760 1266128 . + 0 ID=cds-WP_017923990.1;Parent=gene-NIV78_RS05855;Dbxref=Genbank:WP_017923990.1;Name=WP_017923990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735218.1;locus_tag=NIV78_RS05855;product=hypothetical protein;protein_id=WP_017923990.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1266256 1267104 . + . ID=gene-NIV78_RS05860;Name=NIV78_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05860 NZ_CP100136.1 Protein Homology CDS 1266256 1267104 . + 0 ID=cds-WP_251107303.1;Parent=gene-NIV78_RS05860;Dbxref=Genbank:WP_251107303.1;Name=WP_251107303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735219.1;locus_tag=NIV78_RS05860;product=BON domain-containing protein;protein_id=WP_251107303.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1267122 1268105 . - . ID=gene-NIV78_RS05865;Name=NIV78_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05865 NZ_CP100136.1 Protein Homology CDS 1267122 1268105 . - 0 ID=cds-WP_012735220.1;Parent=gene-NIV78_RS05865;Dbxref=Genbank:WP_012735220.1;Name=WP_012735220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735220.1;locus_tag=NIV78_RS05865;product=sigma-54 dependent transcriptional regulator;protein_id=WP_012735220.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1268496 1269860 . + . ID=gene-NIV78_RS05870;Name=NIV78_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05870 NZ_CP100136.1 Protein Homology CDS 1268496 1269860 . + 0 ID=cds-WP_017425052.1;Parent=gene-NIV78_RS05870;Dbxref=Genbank:WP_017425052.1;Name=WP_017425052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398906.1;locus_tag=NIV78_RS05870;product=sigma-54 dependent transcriptional regulator;protein_id=WP_017425052.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1269979 1272336 . + . ID=gene-NIV78_RS05875;Name=NIV78_RS05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05875 NZ_CP100136.1 Protein Homology CDS 1269979 1272336 . + 0 ID=cds-WP_232734567.1;Parent=gene-NIV78_RS05875;Dbxref=Genbank:WP_232734567.1;Name=WP_232734567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735222.1;locus_tag=NIV78_RS05875;product=ATP-binding protein;protein_id=WP_232734567.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1272645 1273034 . + . ID=gene-NIV78_RS05880;Name=NIV78_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05880 NZ_CP100136.1 Protein Homology CDS 1272645 1273034 . + 0 ID=cds-WP_012735223.1;Parent=gene-NIV78_RS05880;Dbxref=Genbank:WP_012735223.1;Name=WP_012735223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735223.1;locus_tag=NIV78_RS05880;product=BON domain-containing protein;protein_id=WP_012735223.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1273157 1273780 . + . ID=gene-NIV78_RS05885;Name=NIV78_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05885 NZ_CP100136.1 Protein Homology CDS 1273157 1273780 . + 0 ID=cds-WP_017425051.1;Parent=gene-NIV78_RS05885;Dbxref=Genbank:WP_017425051.1;Name=WP_017425051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425051.1;locus_tag=NIV78_RS05885;product=DUF4142 domain-containing protein;protein_id=WP_017425051.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1273872 1274468 . + . ID=gene-NIV78_RS05890;Name=NIV78_RS05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05890 NZ_CP100136.1 Protein Homology CDS 1273872 1274468 . + 0 ID=cds-WP_012735225.1;Parent=gene-NIV78_RS05890;Dbxref=Genbank:WP_012735225.1;Name=WP_012735225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697390.1;locus_tag=NIV78_RS05890;product=hypothetical protein;protein_id=WP_012735225.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1274824 1275009 . - . ID=gene-NIV78_RS05895;Name=NIV78_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05895 NZ_CP100136.1 Protein Homology CDS 1274824 1275009 . - 0 ID=cds-WP_043194984.1;Parent=gene-NIV78_RS05895;Dbxref=Genbank:WP_043194984.1;Name=WP_043194984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658805.1;locus_tag=NIV78_RS05895;product=hypothetical protein;protein_id=WP_043194984.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1275353 1275646 . + . ID=gene-NIV78_RS05900;Name=NIV78_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05900 NZ_CP100136.1 GeneMarkS-2+ CDS 1275353 1275646 . + 0 ID=cds-WP_257757283.1;Parent=gene-NIV78_RS05900;Dbxref=Genbank:WP_257757283.1;Name=WP_257757283.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS05900;product=hypothetical protein;protein_id=WP_257757283.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1275791 1276690 . + . ID=gene-NIV78_RS05905;Name=NIV78_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05905 NZ_CP100136.1 Protein Homology CDS 1275791 1276690 . + 0 ID=cds-WP_017924168.1;Parent=gene-NIV78_RS05905;Dbxref=Genbank:WP_017924168.1;Name=WP_017924168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735226.1;locus_tag=NIV78_RS05905;product=MipA/OmpV family protein;protein_id=WP_017924168.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1276759 1277277 . + . ID=gene-NIV78_RS05910;Name=NIV78_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05910 NZ_CP100136.1 Protein Homology CDS 1276759 1277277 . + 0 ID=cds-WP_012735227.1;Parent=gene-NIV78_RS05910;Dbxref=Genbank:WP_012735227.1;Name=WP_012735227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735227.1;locus_tag=NIV78_RS05910;product=DUF3005 domain-containing protein;protein_id=WP_012735227.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1277511 1278278 . - . ID=gene-NIV78_RS05915;Name=NIV78_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05915 NZ_CP100136.1 Protein Homology CDS 1277511 1278278 . - 0 ID=cds-WP_012735228.1;Parent=gene-NIV78_RS05915;Dbxref=Genbank:WP_012735228.1;Name=WP_012735228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004553958.1;locus_tag=NIV78_RS05915;product=DUF4397 domain-containing protein;protein_id=WP_012735228.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1278809 1280263 . + . ID=gene-NIV78_RS05920;Name=NIV78_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05920 NZ_CP100136.1 Protein Homology CDS 1278809 1280263 . + 0 ID=cds-WP_012735229.1;Parent=gene-NIV78_RS05920;Dbxref=Genbank:WP_012735229.1;Name=WP_012735229.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523340.1;locus_tag=NIV78_RS05920;product=RNA polymerase factor sigma-54;protein_id=WP_012735229.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1280325 1280486 . + . ID=gene-NIV78_RS05925;Name=NIV78_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05925 NZ_CP100136.1 Protein Homology CDS 1280325 1280486 . + 0 ID=cds-WP_012735230.1;Parent=gene-NIV78_RS05925;Dbxref=Genbank:WP_012735230.1;Name=WP_012735230.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010120894.1;locus_tag=NIV78_RS05925;product=DUF1328 domain-containing protein;protein_id=WP_012735230.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1280660 1281763 . - . ID=gene-NIV78_RS05930;Name=NIV78_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05930 NZ_CP100136.1 Protein Homology CDS 1280660 1281763 . - 0 ID=cds-WP_012735231.1;Parent=gene-NIV78_RS05930;Dbxref=Genbank:WP_012735231.1;Name=WP_012735231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735231.1;locus_tag=NIV78_RS05930;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_012735231.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1281772 1282395 . - . ID=gene-NIV78_RS05935;Name=NIV78_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05935 NZ_CP100136.1 Protein Homology CDS 1281772 1282395 . - 0 ID=cds-WP_169511727.1;Parent=gene-NIV78_RS05935;Dbxref=Genbank:WP_169511727.1;Name=WP_169511727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735232.1;locus_tag=NIV78_RS05935;product=chemotaxis protein CheB;protein_id=WP_169511727.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1282454 1283302 . - . ID=gene-NIV78_RS05940;Name=NIV78_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05940 NZ_CP100136.1 Protein Homology CDS 1282454 1283302 . - 0 ID=cds-WP_017924391.1;Parent=gene-NIV78_RS05940;Dbxref=Genbank:WP_017924391.1;Name=WP_017924391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735233.1;locus_tag=NIV78_RS05940;product=chemotaxis protein CheR;protein_id=WP_017924391.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1283318 1286866 . - . ID=gene-NIV78_RS05945;Name=NIV78_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05945 NZ_CP100136.1 Protein Homology CDS 1283318 1286866 . - 0 ID=cds-WP_251107304.1;Parent=gene-NIV78_RS05945;Dbxref=Genbank:WP_251107304.1;Name=WP_251107304.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735234.1;locus_tag=NIV78_RS05945;product=response regulator;protein_id=WP_251107304.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1287399 1287653 . + . ID=gene-NIV78_RS05950;Name=NIV78_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05950 NZ_CP100136.1 Protein Homology CDS 1287399 1287653 . + 0 ID=cds-WP_012735235.1;Parent=gene-NIV78_RS05950;Dbxref=Genbank:WP_012735235.1;Name=WP_012735235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735235.1;locus_tag=NIV78_RS05950;product=Imm74 family immunity protein;protein_id=WP_012735235.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1288037 1288522 . + . ID=gene-NIV78_RS05955;Name=NIV78_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05955 NZ_CP100136.1 Protein Homology CDS 1288037 1288522 . + 0 ID=cds-WP_080630213.1;Parent=gene-NIV78_RS05955;Dbxref=Genbank:WP_080630213.1;Name=WP_080630213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017233341.1;locus_tag=NIV78_RS05955;product=cupin domain-containing protein;protein_id=WP_080630213.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1288714 1289577 . - . ID=gene-NIV78_RS05960;Name=NIV78_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05960 NZ_CP100136.1 Protein Homology CDS 1288714 1289577 . - 0 ID=cds-WP_257757288.1;Parent=gene-NIV78_RS05960;Dbxref=Genbank:WP_257757288.1;Name=WP_257757288.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039499.1;locus_tag=NIV78_RS05960;product=DUF5677 domain-containing protein;protein_id=WP_257757288.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1289611 1290279 . - . ID=gene-NIV78_RS05965;Name=NIV78_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05965 NZ_CP100136.1 GeneMarkS-2+ CDS 1289611 1290279 . - 0 ID=cds-WP_257757290.1;Parent=gene-NIV78_RS05965;Dbxref=Genbank:WP_257757290.1;Name=WP_257757290.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS05965;product=hypothetical protein;protein_id=WP_257757290.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1290802 1291038 . - . ID=gene-NIV78_RS05970;Name=NIV78_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05970 NZ_CP100136.1 Protein Homology CDS 1290802 1291038 . - 0 ID=cds-WP_012735238.1;Parent=gene-NIV78_RS05970;Dbxref=Genbank:WP_012735238.1;Name=WP_012735238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735238.1;locus_tag=NIV78_RS05970;product=hypothetical protein;protein_id=WP_012735238.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1291038 1291280 . - . ID=gene-NIV78_RS05975;Name=NIV78_RS05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05975 NZ_CP100136.1 Protein Homology CDS 1291038 1291280 . - 0 ID=cds-WP_257757292.1;Parent=gene-NIV78_RS05975;Dbxref=Genbank:WP_257757292.1;Name=WP_257757292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735239.1;locus_tag=NIV78_RS05975;product=DUF2778 domain-containing protein;protein_id=WP_257757292.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1291500 1292317 . - . ID=gene-NIV78_RS05980;Name=NIV78_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05980 NZ_CP100136.1 Protein Homology CDS 1291969 1292317 . - 0 ID=cds-WP_085962356.1;Parent=gene-NIV78_RS05980;Dbxref=Genbank:WP_085962356.1;Name=WP_085962356.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS05980;product=IS5 family transposase;protein_id=WP_085962356.1;transl_table=11 NZ_CP100136.1 Protein Homology CDS 1291500 1291969 . - 2 ID=cds-WP_085962356.1;Parent=gene-NIV78_RS05980;Dbxref=Genbank:WP_085962356.1;Name=WP_085962356.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS05980;product=IS5 family transposase;protein_id=WP_085962356.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1292749 1292825 . - . ID=gene-NIV78_RS05985;Name=NIV78_RS05985;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS05985 NZ_CP100136.1 tRNAscan-SE tRNA 1292749 1292825 . - . ID=rna-NIV78_RS05985;Parent=gene-NIV78_RS05985;anticodon=(pos:complement(1292789..1292791));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS05985;product=tRNA-Pro NZ_CP100136.1 tRNAscan-SE exon 1292749 1292825 . - . ID=exon-NIV78_RS05985-1;Parent=rna-NIV78_RS05985;anticodon=(pos:complement(1292789..1292791));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS05985;product=tRNA-Pro NZ_CP100136.1 RefSeq gene 1292938 1293396 . + . ID=gene-NIV78_RS05990;Name=NIV78_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05990 NZ_CP100136.1 Protein Homology CDS 1292938 1293396 . + 0 ID=cds-WP_017423122.1;Parent=gene-NIV78_RS05990;Dbxref=Genbank:WP_017423122.1;Name=WP_017423122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004556863.1;locus_tag=NIV78_RS05990;product=histidine phosphatase family protein;protein_id=WP_017423122.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1293548 1294366 . + . ID=gene-NIV78_RS05995;Name=NIV78_RS05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS05995 NZ_CP100136.1 Protein Homology CDS 1293548 1294366 . + 0 ID=cds-WP_012735241.1;Parent=gene-NIV78_RS05995;Dbxref=Genbank:WP_012735241.1;Name=WP_012735241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004266561.1;locus_tag=NIV78_RS05995;product=GNAT family N-acetyltransferase;protein_id=WP_012735241.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1294568 1294756 . + . ID=gene-NIV78_RS06000;Name=NIV78_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06000 NZ_CP100136.1 Protein Homology CDS 1294568 1294756 . + 0 ID=cds-WP_012735242.1;Parent=gene-NIV78_RS06000;Dbxref=Genbank:WP_012735242.1;Name=WP_012735242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735242.1;locus_tag=NIV78_RS06000;product=hypothetical protein;protein_id=WP_012735242.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1294856 1296217 . - . ID=gene-NIV78_RS06005;Name=NIV78_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06005 NZ_CP100136.1 Protein Homology CDS 1294856 1296217 . - 0 ID=cds-WP_017923041.1;Parent=gene-NIV78_RS06005;Dbxref=Genbank:WP_017923041.1;Name=WP_017923041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735243.1;locus_tag=NIV78_RS06005;product=MATE family efflux transporter;protein_id=WP_017923041.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1296226 1296561 . - . ID=gene-NIV78_RS06010;Name=NIV78_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06010 NZ_CP100136.1 Protein Homology CDS 1296226 1296561 . - 0 ID=cds-WP_012735244.1;Parent=gene-NIV78_RS06010;Dbxref=Genbank:WP_012735244.1;Name=WP_012735244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735244.1;locus_tag=NIV78_RS06010;product=DUF2288 domain-containing protein;protein_id=WP_012735244.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1296801 1298423 . - . ID=gene-NIV78_RS06015;Name=NIV78_RS06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06015 NZ_CP100136.1 Protein Homology CDS 1296801 1298423 . - 0 ID=cds-WP_017923042.1;Parent=gene-NIV78_RS06015;Dbxref=Genbank:WP_017923042.1;Name=WP_017923042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601940.1;locus_tag=NIV78_RS06015;product=acyl-CoA synthetase;protein_id=WP_017923042.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1298743 1299444 . - . ID=gene-NIV78_RS06020;Name=NIV78_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06020 NZ_CP100136.1 Protein Homology CDS 1298743 1299444 . - 0 ID=cds-WP_012735246.1;Parent=gene-NIV78_RS06020;Dbxref=Genbank:WP_012735246.1;Name=WP_012735246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010102904.1;locus_tag=NIV78_RS06020;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_012735246.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1299826 1300734 . - . ID=gene-NIV78_RS06025;Name=NIV78_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06025 NZ_CP100136.1 Protein Homology CDS 1299826 1300734 . - 0 ID=cds-WP_012735247.1;Parent=gene-NIV78_RS06025;Dbxref=Genbank:WP_012735247.1;Name=WP_012735247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735247.1;locus_tag=NIV78_RS06025;product=aldose 1-epimerase;protein_id=WP_012735247.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1301039 1301383 . - . ID=gene-NIV78_RS06030;Name=NIV78_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06030 NZ_CP100136.1 GeneMarkS-2+ CDS 1301039 1301383 . - 0 ID=cds-WP_171466530.1;Parent=gene-NIV78_RS06030;Dbxref=Genbank:WP_171466530.1;Name=WP_171466530.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS06030;product=hypothetical protein;protein_id=WP_171466530.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1301306 1302136 . + . ID=gene-NIV78_RS06035;Name=NIV78_RS06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06035 NZ_CP100136.1 Protein Homology CDS 1301306 1302136 . + 0 ID=cds-WP_012735248.1;Parent=gene-NIV78_RS06035;Dbxref=Genbank:WP_012735248.1;Name=WP_012735248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007181041.1;locus_tag=NIV78_RS06035;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_012735248.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1302419 1302495 . + . ID=gene-NIV78_RS06040;Name=NIV78_RS06040;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS06040 NZ_CP100136.1 tRNAscan-SE tRNA 1302419 1302495 . + . ID=rna-NIV78_RS06040;Parent=gene-NIV78_RS06040;anticodon=(pos:1302453..1302455);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS06040;product=tRNA-Arg NZ_CP100136.1 tRNAscan-SE exon 1302419 1302495 . + . ID=exon-NIV78_RS06040-1;Parent=rna-NIV78_RS06040;anticodon=(pos:1302453..1302455);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS06040;product=tRNA-Arg NZ_CP100136.1 RefSeq gene 1302951 1303931 . + . ID=gene-NIV78_RS06045;Name=NIV78_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06045 NZ_CP100136.1 GeneMarkS-2+ CDS 1302951 1303931 . + 0 ID=cds-WP_143262526.1;Parent=gene-NIV78_RS06045;Dbxref=Genbank:WP_143262526.1;Name=WP_143262526.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS06045;product=hypothetical protein;protein_id=WP_143262526.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1304119 1304391 . + . ID=gene-NIV78_RS06050;Name=NIV78_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06050 NZ_CP100136.1 GeneMarkS-2+ CDS 1304119 1304391 . + 0 ID=cds-WP_217042897.1;Parent=gene-NIV78_RS06050;Dbxref=Genbank:WP_217042897.1;Name=WP_217042897.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS06050;product=helix-turn-helix domain-containing protein;protein_id=WP_217042897.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1304392 1305543 . + . ID=gene-NIV78_RS06055;Name=NIV78_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06055 NZ_CP100136.1 GeneMarkS-2+ CDS 1304392 1305543 . + 0 ID=cds-WP_257757296.1;Parent=gene-NIV78_RS06055;Dbxref=Genbank:WP_257757296.1;Name=WP_257757296.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS06055;product=hypothetical protein;protein_id=WP_257757296.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1305549 1306346 . - . ID=gene-NIV78_RS06060;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=NIV78_RS06060 NZ_CP100136.1 Protein Homology CDS 1305549 1306346 . - 0 ID=cds-WP_012732720.1;Parent=gene-NIV78_RS06060;Dbxref=Genbank:WP_012732720.1;Name=WP_012732720.1;Ontology_term=GO:0005524;gbkey=CDS;gene=istB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013700154.1;locus_tag=NIV78_RS06060;product=IS21-like element helper ATPase IstB;protein_id=WP_012732720.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1306339 1307844 . - . ID=gene-NIV78_RS06065;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=NIV78_RS06065 NZ_CP100136.1 Protein Homology CDS 1306339 1307844 . - 0 ID=cds-WP_012732721.1;Parent=gene-NIV78_RS06065;Dbxref=Genbank:WP_012732721.1;Name=WP_012732721.1;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546517.1;locus_tag=NIV78_RS06065;product=IS21 family transposase;protein_id=WP_012732721.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1307976 1308347 . + . ID=gene-NIV78_RS06070;Name=NIV78_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06070 NZ_CP100136.1 GeneMarkS-2+ CDS 1307976 1308347 . + 0 ID=cds-WP_080324719.1;Parent=gene-NIV78_RS06070;Dbxref=Genbank:WP_080324719.1;Name=WP_080324719.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS06070;product=hypothetical protein;protein_id=WP_080324719.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 1308754 1309032 . - . ID=gene-NIV78_RS06075;Name=NIV78_RS06075;end_range=1309032,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS06075;partial=true;pseudo=true NZ_CP100136.1 Protein Homology CDS 1308754 1309032 . - 0 ID=cds-NIV78_RS06075;Parent=gene-NIV78_RS06075;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1309032,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490566.1;locus_tag=NIV78_RS06075;partial=true;product=preprotein translocase;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 1309161 1309646 . + . ID=gene-NIV78_RS06080;Name=NIV78_RS06080;end_range=1309646,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS06080;partial=true;pseudo=true NZ_CP100136.1 Protein Homology CDS 1309161 1309646 . + 0 ID=cds-NIV78_RS06080;Parent=gene-NIV78_RS06080;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1309646,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734099.1;locus_tag=NIV78_RS06080;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 1309773 1311029 . + . ID=gene-NIV78_RS06085;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=NIV78_RS06085 NZ_CP100136.1 Protein Homology CDS 1309773 1311029 . + 0 ID=cds-WP_012734039.1-2;Parent=gene-NIV78_RS06085;Dbxref=Genbank:WP_012734039.1;Name=WP_012734039.1;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476480.1;locus_tag=NIV78_RS06085;product=IS21 family transposase;protein_id=WP_012734039.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1311026 1311892 . + . ID=gene-NIV78_RS06090;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=NIV78_RS06090 NZ_CP100136.1 Protein Homology CDS 1311026 1311892 . + 0 ID=cds-WP_012732871.1-2;Parent=gene-NIV78_RS06090;Dbxref=Genbank:WP_012732871.1;Name=WP_012732871.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476481.1;locus_tag=NIV78_RS06090;product=IS21-like element ISBcen28 family helper ATPase IstB;protein_id=WP_012732871.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 1311962 1312525 . + . ID=gene-NIV78_RS06095;Name=NIV78_RS06095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS06095;partial=true;pseudo=true;start_range=.,1311962 NZ_CP100136.1 Protein Homology CDS 1311962 1312525 . + 0 ID=cds-NIV78_RS06095;Parent=gene-NIV78_RS06095;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734099.1;locus_tag=NIV78_RS06095;partial=true;product=integrase core domain-containing protein;pseudo=true;start_range=.,1311962;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 1312555 1313351 . - . ID=gene-NIV78_RS06100;Name=NIV78_RS06100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS06100;pseudo=true NZ_CP100136.1 Protein Homology CDS 1312555 1313351 . - 0 ID=cds-NIV78_RS06100;Parent=gene-NIV78_RS06100;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611587.1;locus_tag=NIV78_RS06100;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 1313472 1314275 . - . ID=gene-NIV78_RS06105;Name=NIV78_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06105 NZ_CP100136.1 Protein Homology CDS 1313472 1314275 . - 0 ID=cds-WP_015876294.1;Parent=gene-NIV78_RS06105;Dbxref=Genbank:WP_015876294.1;Name=WP_015876294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876294.1;locus_tag=NIV78_RS06105;product=phytanoyl-CoA dioxygenase family protein;protein_id=WP_015876294.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1314284 1314862 . - . ID=gene-NIV78_RS06110;Name=NIV78_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06110 NZ_CP100136.1 Protein Homology CDS 1314284 1314862 . - 0 ID=cds-WP_017924011.1;Parent=gene-NIV78_RS06110;Dbxref=Genbank:WP_017924011.1;Name=WP_017924011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007180001.1;locus_tag=NIV78_RS06110;product=methyltransferase domain-containing protein;protein_id=WP_017924011.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1314912 1315202 . - . ID=gene-NIV78_RS06115;Name=NIV78_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06115 NZ_CP100136.1 GeneMarkS-2+ CDS 1314912 1315202 . - 0 ID=cds-WP_017924012.1;Parent=gene-NIV78_RS06115;Dbxref=Genbank:WP_017924012.1;Name=WP_017924012.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS06115;product=hypothetical protein;protein_id=WP_017924012.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 1315469 1315963 . + . ID=gene-NIV78_RS06120;Name=NIV78_RS06120;end_range=1315963,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS06120;partial=true;pseudo=true NZ_CP100136.1 Protein Homology CDS 1315469 1315963 . + 0 ID=cds-NIV78_RS06120;Parent=gene-NIV78_RS06120;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1315963,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558218.1;locus_tag=NIV78_RS06120;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP100136.1 cmsearch sequence_feature 1315750 1315866 . + . ID=id-NIV78_RS06120;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS06120;pseudo=true NZ_CP100136.1 RefSeq gene 1316965 1317741 . + . ID=gene-NIV78_RS06125;Name=NIV78_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06125 NZ_CP100136.1 Protein Homology CDS 1316965 1317741 . + 0 ID=cds-WP_257757302.1;Parent=gene-NIV78_RS06125;Dbxref=Genbank:WP_257757302.1;Name=WP_257757302.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425185.1;locus_tag=NIV78_RS06125;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_257757302.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1317754 1318002 . + . ID=gene-NIV78_RS06130;Name=NIV78_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06130 NZ_CP100136.1 Protein Homology CDS 1317754 1318002 . + 0 ID=cds-WP_017425184.1;Parent=gene-NIV78_RS06130;Dbxref=Genbank:WP_017425184.1;Name=WP_017425184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425184.1;locus_tag=NIV78_RS06130;product=hypothetical protein;protein_id=WP_017425184.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1318103 1322116 . + . ID=gene-NIV78_RS06135;Name=NIV78_RS06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06135 NZ_CP100136.1 Protein Homology CDS 1318103 1322116 . + 0 ID=cds-WP_257757304.1;Parent=gene-NIV78_RS06135;Dbxref=Genbank:WP_257757304.1;Name=WP_257757304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877003.1;locus_tag=NIV78_RS06135;product=FAD/FMN-binding oxidoreductase;protein_id=WP_257757304.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1322318 1322743 . - . ID=gene-NIV78_RS06140;Name=NIV78_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06140 NZ_CP100136.1 GeneMarkS-2+ CDS 1322318 1322743 . - 0 ID=cds-WP_241766980.1;Parent=gene-NIV78_RS06140;Dbxref=Genbank:WP_241766980.1;Name=WP_241766980.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS06140;product=hypothetical protein;protein_id=WP_241766980.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1322742 1323452 . + . ID=gene-NIV78_RS06145;Name=NIV78_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06145 NZ_CP100136.1 Protein Homology CDS 1322742 1323452 . + 0 ID=cds-WP_015876290.1;Parent=gene-NIV78_RS06145;Dbxref=Genbank:WP_015876290.1;Name=WP_015876290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876290.1;locus_tag=NIV78_RS06145;product=ABC transporter ATP-binding protein;protein_id=WP_015876290.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1323449 1324840 . + . ID=gene-NIV78_RS06150;Name=NIV78_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06150 NZ_CP100136.1 Protein Homology CDS 1323449 1324840 . + 0 ID=cds-WP_015876289.1;Parent=gene-NIV78_RS06150;Dbxref=Genbank:WP_015876289.1;Name=WP_015876289.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190565.1;locus_tag=NIV78_RS06150;product=FtsX-like permease family protein;protein_id=WP_015876289.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1324902 1325339 . + . ID=gene-NIV78_RS06155;Name=NIV78_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06155 NZ_CP100136.1 Protein Homology CDS 1324902 1325339 . + 0 ID=cds-WP_251107542.1;Parent=gene-NIV78_RS06155;Dbxref=Genbank:WP_251107542.1;Name=WP_251107542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876288.1;locus_tag=NIV78_RS06155;product=FixH family protein;protein_id=WP_251107542.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1325399 1326532 . + . ID=gene-NIV78_RS06160;Name=NIV78_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06160 NZ_CP100136.1 Protein Homology CDS 1325399 1326532 . + 0 ID=cds-WP_251107541.1;Parent=gene-NIV78_RS06160;Dbxref=Genbank:WP_251107541.1;Name=WP_251107541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876287.1;locus_tag=NIV78_RS06160;product=DJ-1/PfpI family protein;protein_id=WP_251107541.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1326619 1327386 . + . ID=gene-NIV78_RS06165;Name=NIV78_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06165 NZ_CP100136.1 Protein Homology CDS 1326619 1327386 . + 0 ID=cds-WP_035979296.1;Parent=gene-NIV78_RS06165;Dbxref=Genbank:WP_035979296.1;Name=WP_035979296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876286.1;locus_tag=NIV78_RS06165;product=outer membrane lipoprotein-sorting protein;protein_id=WP_035979296.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1327383 1328660 . + . ID=gene-NIV78_RS06170;Name=NIV78_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06170 NZ_CP100136.1 Protein Homology CDS 1327383 1328660 . + 0 ID=cds-WP_015876285.1;Parent=gene-NIV78_RS06170;Dbxref=Genbank:WP_015876285.1;Name=WP_015876285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425079.1;locus_tag=NIV78_RS06170;product=hypothetical protein;protein_id=WP_015876285.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1328742 1329134 . + . ID=gene-NIV78_RS06175;Name=NIV78_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06175 NZ_CP100136.1 Protein Homology CDS 1328742 1329134 . + 0 ID=cds-WP_015876284.1;Parent=gene-NIV78_RS06175;Dbxref=Genbank:WP_015876284.1;Name=WP_015876284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876284.1;locus_tag=NIV78_RS06175;product=RidA family protein;protein_id=WP_015876284.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1329153 1330472 . - . ID=gene-NIV78_RS06180;Name=NIV78_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06180 NZ_CP100136.1 Protein Homology CDS 1329153 1330472 . - 0 ID=cds-WP_161520748.1;Parent=gene-NIV78_RS06180;Dbxref=Genbank:WP_161520748.1;Name=WP_161520748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876283.1;locus_tag=NIV78_RS06180;product=cytochrome-c peroxidase;protein_id=WP_161520748.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1330459 1331421 . - . ID=gene-NIV78_RS06185;Name=NIV78_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06185 NZ_CP100136.1 Protein Homology CDS 1330459 1331421 . - 0 ID=cds-WP_017923931.1;Parent=gene-NIV78_RS06185;Dbxref=Genbank:WP_017923931.1;Name=WP_017923931.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF016777.2;locus_tag=NIV78_RS06185;product=amidohydrolase family protein;protein_id=WP_017923931.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1331418 1332080 . - . ID=gene-NIV78_RS06190;Name=NIV78_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06190 NZ_CP100136.1 Protein Homology CDS 1331418 1332080 . - 0 ID=cds-WP_015876281.1;Parent=gene-NIV78_RS06190;Dbxref=Genbank:WP_015876281.1;Name=WP_015876281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876281.1;locus_tag=NIV78_RS06190;product=N-acetyltransferase;protein_id=WP_015876281.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1332094 1333119 . - . ID=gene-NIV78_RS06195;Name=NIV78_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06195 NZ_CP100136.1 Protein Homology CDS 1332094 1333119 . - 0 ID=cds-WP_015876280.1;Parent=gene-NIV78_RS06195;Dbxref=Genbank:WP_015876280.1;Name=WP_015876280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876280.1;locus_tag=NIV78_RS06195;product=cysteine synthase family protein;protein_id=WP_015876280.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1333278 1335107 . - . ID=gene-NIV78_RS06200;Name=NIV78_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06200 NZ_CP100136.1 GeneMarkS-2+ CDS 1333278 1335107 . - 0 ID=cds-WP_161520749.1;Parent=gene-NIV78_RS06200;Dbxref=Genbank:WP_161520749.1;Name=WP_161520749.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS06200;product=alpha/beta hydrolase;protein_id=WP_161520749.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1335116 1335382 . - . ID=gene-NIV78_RS06205;Name=NIV78_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06205 NZ_CP100136.1 Protein Homology CDS 1335116 1335382 . - 0 ID=cds-WP_017924261.1;Parent=gene-NIV78_RS06205;Dbxref=Genbank:WP_017924261.1;Name=WP_017924261.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012759.2;locus_tag=NIV78_RS06205;product=acyl carrier protein;protein_id=WP_017924261.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1335553 1336299 . + . ID=gene-NIV78_RS06210;Name=NIV78_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06210 NZ_CP100136.1 Protein Homology CDS 1335553 1336299 . + 0 ID=cds-WP_015876278.1;Parent=gene-NIV78_RS06210;Dbxref=Genbank:WP_015876278.1;Name=WP_015876278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876278.1;locus_tag=NIV78_RS06210;product=iron-containing redox enzyme family protein;protein_id=WP_015876278.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1336244 1337824 . + . ID=gene-NIV78_RS06215;Name=NIV78_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06215 NZ_CP100136.1 Protein Homology CDS 1336244 1337824 . + 0 ID=cds-WP_237657738.1;Parent=gene-NIV78_RS06215;Dbxref=Genbank:WP_237657738.1;Name=WP_237657738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876277.1;locus_tag=NIV78_RS06215;product=AMP-binding protein;protein_id=WP_237657738.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1337889 1340141 . + . ID=gene-NIV78_RS06220;Name=NIV78_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06220 NZ_CP100136.1 Protein Homology CDS 1337889 1340141 . + 0 ID=cds-WP_124836354.1;Parent=gene-NIV78_RS06220;Dbxref=Genbank:WP_124836354.1;Name=WP_124836354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424127.1;locus_tag=NIV78_RS06220;product=AMP-binding protein;protein_id=WP_124836354.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1340188 1345806 . + . ID=gene-NIV78_RS06225;Name=NIV78_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06225 NZ_CP100136.1 Protein Homology CDS 1340188 1345806 . + 0 ID=cds-WP_198292423.1;Parent=gene-NIV78_RS06225;Dbxref=Genbank:WP_198292423.1;Name=WP_198292423.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012901.2;locus_tag=NIV78_RS06225;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_198292423.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1345803 1350437 . + . ID=gene-NIV78_RS06230;Name=NIV78_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06230 NZ_CP100136.1 Protein Homology CDS 1345803 1350437 . + 0 ID=cds-WP_169511750.1;Parent=gene-NIV78_RS06230;Dbxref=Genbank:WP_169511750.1;Name=WP_169511750.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012873.2;locus_tag=NIV78_RS06230;product=condensation domain-containing protein;protein_id=WP_169511750.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1350456 1354829 . + . ID=gene-NIV78_RS06235;Name=NIV78_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06235 NZ_CP100136.1 Protein Homology CDS 1350456 1354829 . + 0 ID=cds-WP_251118787.1;Parent=gene-NIV78_RS06235;Dbxref=Genbank:WP_251118787.1;Name=WP_251118787.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012873.2;locus_tag=NIV78_RS06235;product=thioester reductase domain-containing protein;protein_id=WP_251118787.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1355034 1356644 . - . ID=gene-NIV78_RS06240;Name=NIV78_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06240 NZ_CP100136.1 Protein Homology CDS 1355034 1356644 . - 0 ID=cds-WP_251118788.1;Parent=gene-NIV78_RS06240;Dbxref=Genbank:WP_251118788.1;Name=WP_251118788.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024905.2;locus_tag=NIV78_RS06240;product=FUSC family protein;protein_id=WP_251118788.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1356631 1357752 . + . ID=gene-NIV78_RS06245;Name=NIV78_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06245 NZ_CP100136.1 Protein Homology CDS 1356631 1357752 . + 0 ID=cds-WP_237657739.1;Parent=gene-NIV78_RS06245;Dbxref=Genbank:WP_237657739.1;Name=WP_237657739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013591666.1;locus_tag=NIV78_RS06245;product=DUF484 family protein;protein_id=WP_237657739.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1357817 1358008 . + . ID=gene-NIV78_RS06250;Name=NIV78_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06250 NZ_CP100136.1 GeneMarkS-2+ CDS 1357817 1358008 . + 0 ID=cds-WP_017433389.1;Parent=gene-NIV78_RS06250;Dbxref=Genbank:WP_017433389.1;Name=WP_017433389.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS06250;product=hypothetical protein;protein_id=WP_017433389.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1358115 1358762 . + . ID=gene-NIV78_RS06255;Name=NIV78_RS06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06255 NZ_CP100136.1 Protein Homology CDS 1358115 1358762 . + 0 ID=cds-WP_015876271.1;Parent=gene-NIV78_RS06255;Dbxref=Genbank:WP_015876271.1;Name=WP_015876271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876271.1;locus_tag=NIV78_RS06255;product=carbonic anhydrase;protein_id=WP_015876271.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1359060 1359374 . + . ID=gene-NIV78_RS06260;Name=NIV78_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06260 NZ_CP100136.1 GeneMarkS-2+ CDS 1359060 1359374 . + 0 ID=cds-WP_017433388.1;Parent=gene-NIV78_RS06260;Dbxref=Genbank:WP_017433388.1;Name=WP_017433388.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS06260;product=hypothetical protein;protein_id=WP_017433388.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1359446 1360600 . + . ID=gene-NIV78_RS06265;Name=NIV78_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06265 NZ_CP100136.1 Protein Homology CDS 1359446 1360600 . + 0 ID=cds-WP_232252236.1;Parent=gene-NIV78_RS06265;Dbxref=Genbank:WP_232252236.1;Name=WP_232252236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876270.1;locus_tag=NIV78_RS06265;product=beta-ketoacyl-[acyl-carrier-protein] synthase family protein;protein_id=WP_232252236.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1360880 1364293 . + . ID=gene-NIV78_RS06270;Name=NIV78_RS06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06270 NZ_CP100136.1 Protein Homology CDS 1360880 1364293 . + 0 ID=cds-WP_251107534.1;Parent=gene-NIV78_RS06270;Dbxref=Genbank:WP_251107534.1;Name=WP_251107534.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=NIV78_RS06270;product=ATP-binding protein;protein_id=WP_251107534.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1364348 1365004 . - . ID=gene-NIV78_RS06275;Name=NIV78_RS06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06275 NZ_CP100136.1 Protein Homology CDS 1364348 1365004 . - 0 ID=cds-WP_015876268.1;Parent=gene-NIV78_RS06275;Dbxref=Genbank:WP_015876268.1;Name=WP_015876268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876268.1;locus_tag=NIV78_RS06275;product=response regulator transcription factor;protein_id=WP_015876268.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1365138 1366091 . - . ID=gene-NIV78_RS06280;Name=NIV78_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06280 NZ_CP100136.1 Protein Homology CDS 1365138 1366091 . - 0 ID=cds-WP_015876267.1;Parent=gene-NIV78_RS06280;Dbxref=Genbank:WP_015876267.1;Name=WP_015876267.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876267.1;locus_tag=NIV78_RS06280;product=fimbrial protein;protein_id=WP_015876267.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1366088 1368607 . - . ID=gene-NIV78_RS06285;Name=NIV78_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06285 NZ_CP100136.1 Protein Homology CDS 1366088 1368607 . - 0 ID=cds-WP_080630164.1;Parent=gene-NIV78_RS06285;Dbxref=Genbank:WP_080630164.1;Name=WP_080630164.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012786.2;locus_tag=NIV78_RS06285;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_080630164.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1368519 1369259 . - . ID=gene-NIV78_RS06290;Name=NIV78_RS06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06290 NZ_CP100136.1 Protein Homology CDS 1368519 1369259 . - 0 ID=cds-WP_015876265.1;Parent=gene-NIV78_RS06290;Dbxref=Genbank:WP_015876265.1;Name=WP_015876265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876265.1;locus_tag=NIV78_RS06290;product=molecular chaperone;protein_id=WP_015876265.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1369267 1370193 . - . ID=gene-NIV78_RS06295;Name=NIV78_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06295 NZ_CP100136.1 Protein Homology CDS 1369267 1370193 . - 0 ID=cds-WP_017424367.1;Parent=gene-NIV78_RS06295;Dbxref=Genbank:WP_017424367.1;Name=WP_017424367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424367.1;locus_tag=NIV78_RS06295;product=type 1 fimbrial protein;protein_id=WP_017424367.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1371041 1371205 . + . ID=gene-NIV78_RS06300;Name=NIV78_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06300 NZ_CP100136.1 GeneMarkS-2+ CDS 1371041 1371205 . + 0 ID=cds-WP_153477764.1;Parent=gene-NIV78_RS06300;Dbxref=Genbank:WP_153477764.1;Name=WP_153477764.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS06300;product=hypothetical protein;protein_id=WP_153477764.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1371202 1372923 . + . ID=gene-NIV78_RS06305;Name=NIV78_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06305 NZ_CP100136.1 Protein Homology CDS 1371202 1372923 . + 0 ID=cds-WP_017424365.1;Parent=gene-NIV78_RS06305;Dbxref=Genbank:WP_017424365.1;Name=WP_017424365.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424365.1;locus_tag=NIV78_RS06305;product=ABC transporter permease subunit;protein_id=WP_017424365.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1372946 1373764 . + . ID=gene-NIV78_RS06310;Name=NIV78_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06310 NZ_CP100136.1 Protein Homology CDS 1372946 1373764 . + 0 ID=cds-WP_017424364.1;Parent=gene-NIV78_RS06310;Dbxref=Genbank:WP_017424364.1;Name=WP_017424364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876262.1;locus_tag=NIV78_RS06310;product=ABC transporter ATP-binding protein;protein_id=WP_017424364.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1373887 1375281 . + . ID=gene-NIV78_RS06315;Name=NIV78_RS06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06315 NZ_CP100136.1 Protein Homology CDS 1373887 1375281 . + 0 ID=cds-WP_017922844.1;Parent=gene-NIV78_RS06315;Dbxref=Genbank:WP_017922844.1;Name=WP_017922844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876261.1;locus_tag=NIV78_RS06315;product=carbohydrate porin;protein_id=WP_017922844.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1375493 1376263 . + . ID=gene-NIV78_RS06320;Name=NIV78_RS06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06320 NZ_CP100136.1 Protein Homology CDS 1375493 1376263 . + 0 ID=cds-WP_257757313.1;Parent=gene-NIV78_RS06320;Dbxref=Genbank:WP_257757313.1;Name=WP_257757313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424363.1;locus_tag=NIV78_RS06320;product=SDR family oxidoreductase;protein_id=WP_257757313.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1376361 1376756 . - . ID=gene-NIV78_RS06325;Name=NIV78_RS06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06325 NZ_CP100136.1 Protein Homology CDS 1376361 1376756 . - 0 ID=cds-WP_015876259.1;Parent=gene-NIV78_RS06325;Dbxref=Genbank:WP_015876259.1;Name=WP_015876259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876259.1;locus_tag=NIV78_RS06325;product=tautomerase family protein;protein_id=WP_015876259.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1376782 1376931 . + . ID=gene-NIV78_RS06330;Name=NIV78_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06330 NZ_CP100136.1 GeneMarkS-2+ CDS 1376782 1376931 . + 0 ID=cds-WP_257757315.1;Parent=gene-NIV78_RS06330;Dbxref=Genbank:WP_257757315.1;Name=WP_257757315.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS06330;product=hypothetical protein;protein_id=WP_257757315.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1376931 1377836 . + . ID=gene-NIV78_RS06335;Name=NIV78_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06335 NZ_CP100136.1 Protein Homology CDS 1376931 1377836 . + 0 ID=cds-WP_026051577.1;Parent=gene-NIV78_RS06335;Dbxref=Genbank:WP_026051577.1;Name=WP_026051577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876258.1;locus_tag=NIV78_RS06335;product=LysR substrate-binding domain-containing protein;protein_id=WP_026051577.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1378254 1379399 . - . ID=gene-NIV78_RS06340;Name=NIV78_RS06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06340 NZ_CP100136.1 Protein Homology CDS 1378254 1379399 . - 0 ID=cds-WP_161520758.1;Parent=gene-NIV78_RS06340;Dbxref=Genbank:WP_161520758.1;Name=WP_161520758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876257.1;locus_tag=NIV78_RS06340;product=glycosyltransferase family 9 protein;protein_id=WP_161520758.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1379587 1380150 . - . ID=gene-NIV78_RS06345;Name=NIV78_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06345 NZ_CP100136.1 Protein Homology CDS 1379587 1380150 . - 0 ID=cds-WP_251107533.1;Parent=gene-NIV78_RS06345;Dbxref=Genbank:WP_251107533.1;Name=WP_251107533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875546.1;locus_tag=NIV78_RS06345;product=SDR family oxidoreductase;protein_id=WP_251107533.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1380461 1381990 . - . ID=gene-NIV78_RS06350;Name=NIV78_RS06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06350 NZ_CP100136.1 Protein Homology CDS 1380461 1381990 . - 0 ID=cds-WP_045678925.1;Parent=gene-NIV78_RS06350;Dbxref=Genbank:WP_045678925.1;Name=WP_045678925.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007582308.1;locus_tag=NIV78_RS06350;product=response regulator;protein_id=WP_045678925.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1381978 1383471 . - . ID=gene-NIV78_RS06355;Name=NIV78_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06355 NZ_CP100136.1 Protein Homology CDS 1381978 1383471 . - 0 ID=cds-WP_251107532.1;Parent=gene-NIV78_RS06355;Dbxref=Genbank:WP_251107532.1;Name=WP_251107532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876254.1;locus_tag=NIV78_RS06355;product=ATP-binding protein;protein_id=WP_251107532.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1383529 1384668 . - . ID=gene-NIV78_RS06360;Name=NIV78_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06360 NZ_CP100136.1 Protein Homology CDS 1383529 1384668 . - 0 ID=cds-WP_017423557.1;Parent=gene-NIV78_RS06360;Dbxref=Genbank:WP_017423557.1;Name=WP_017423557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876253.1;locus_tag=NIV78_RS06360;product=ATP-binding protein;protein_id=WP_017423557.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1384653 1385078 . - . ID=gene-NIV78_RS06365;Name=NIV78_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06365 NZ_CP100136.1 Protein Homology CDS 1384653 1385078 . - 0 ID=cds-WP_015876252.1;Parent=gene-NIV78_RS06365;Dbxref=Genbank:WP_015876252.1;Name=WP_015876252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876252.1;locus_tag=NIV78_RS06365;product=ATP-binding protein;protein_id=WP_015876252.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1385099 1385458 . - . ID=gene-NIV78_RS06370;Name=NIV78_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06370 NZ_CP100136.1 Protein Homology CDS 1385099 1385458 . - 0 ID=cds-WP_015876251.1;Parent=gene-NIV78_RS06370;Dbxref=Genbank:WP_015876251.1;Name=WP_015876251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876251.1;locus_tag=NIV78_RS06370;product=STAS domain-containing protein;protein_id=WP_015876251.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1385469 1386332 . - . ID=gene-NIV78_RS06375;Name=NIV78_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06375 NZ_CP100136.1 Protein Homology CDS 1385469 1386332 . - 0 ID=cds-WP_015876250.1;Parent=gene-NIV78_RS06375;Dbxref=Genbank:WP_015876250.1;Name=WP_015876250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016355275.1;locus_tag=NIV78_RS06375;product=STAS domain-containing protein;protein_id=WP_015876250.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 1386701 1386907 . - . ID=gene-NIV78_RS06380;Name=NIV78_RS06380;end_range=1386907,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS06380;partial=true;pseudo=true NZ_CP100136.1 Protein Homology CDS 1386701 1386907 . - 0 ID=cds-NIV78_RS06380;Parent=gene-NIV78_RS06380;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1386907,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007883986.1;locus_tag=NIV78_RS06380;partial=true;product=FCD domain-containing protein;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 1387021 1387446 . - . ID=gene-NIV78_RS06385;Name=NIV78_RS06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06385 NZ_CP100136.1 Protein Homology CDS 1387021 1387446 . - 0 ID=cds-WP_232734565.1;Parent=gene-NIV78_RS06385;Dbxref=Genbank:WP_232734565.1;Name=WP_232734565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876248.1;locus_tag=NIV78_RS06385;product=GNAT family N-acetyltransferase;protein_id=WP_232734565.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1387620 1388282 . + . ID=gene-NIV78_RS06390;Name=NIV78_RS06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06390 NZ_CP100136.1 Protein Homology CDS 1387620 1388282 . + 0 ID=cds-WP_015876247.1;Parent=gene-NIV78_RS06390;Dbxref=Genbank:WP_015876247.1;Name=WP_015876247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876247.1;locus_tag=NIV78_RS06390;product=GntR family transcriptional regulator;protein_id=WP_015876247.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1388266 1389513 . + . ID=gene-NIV78_RS06395;Name=NIV78_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06395 NZ_CP100136.1 Protein Homology CDS 1388266 1389513 . + 0 ID=cds-WP_015876246.1;Parent=gene-NIV78_RS06395;Dbxref=Genbank:WP_015876246.1;Name=WP_015876246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876246.1;locus_tag=NIV78_RS06395;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_015876246.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1389972 1390715 . + . ID=gene-NIV78_RS06400;Name=NIV78_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06400 NZ_CP100136.1 Protein Homology CDS 1389972 1390715 . + 0 ID=cds-WP_217908212.1;Parent=gene-NIV78_RS06400;Dbxref=Genbank:WP_217908212.1;Name=WP_217908212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876245.1;locus_tag=NIV78_RS06400;product=autoinducer binding domain-containing protein;protein_id=WP_217908212.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1391177 1391404 . + . ID=gene-NIV78_RS06405;Name=NIV78_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06405 NZ_CP100136.1 GeneMarkS-2+ CDS 1391177 1391404 . + 0 ID=cds-WP_153477761.1;Parent=gene-NIV78_RS06405;Dbxref=Genbank:WP_153477761.1;Name=WP_153477761.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS06405;product=hypothetical protein;protein_id=WP_153477761.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1391540 1391866 . + . ID=gene-NIV78_RS06410;Name=NIV78_RS06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06410 NZ_CP100136.1 GeneMarkS-2+ CDS 1391540 1391866 . + 0 ID=cds-WP_257757317.1;Parent=gene-NIV78_RS06410;Dbxref=Genbank:WP_257757317.1;Name=WP_257757317.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS06410;product=hypothetical protein;protein_id=WP_257757317.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1392453 1394858 . + . ID=gene-NIV78_RS06415;Name=NIV78_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06415 NZ_CP100136.1 Protein Homology CDS 1392453 1394858 . + 0 ID=cds-WP_257757318.1;Parent=gene-NIV78_RS06415;Dbxref=Genbank:WP_257757318.1;Name=WP_257757318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851633.1;locus_tag=NIV78_RS06415;product=penicillin acylase family protein;protein_id=WP_257757318.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1394943 1396115 . - . ID=gene-NIV78_RS06420;Name=NIV78_RS06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06420 NZ_CP100136.1 Protein Homology CDS 1394943 1396115 . - 0 ID=cds-WP_100556162.1;Parent=gene-NIV78_RS06420;Dbxref=Genbank:WP_100556162.1;Name=WP_100556162.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876243.1;locus_tag=NIV78_RS06420;product=alpha-hydroxy-acid oxidizing protein;protein_id=WP_100556162.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1396460 1397029 . + . ID=gene-NIV78_RS06425;Name=NIV78_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06425 NZ_CP100136.1 Protein Homology CDS 1396460 1397029 . + 0 ID=cds-WP_015876242.1;Parent=gene-NIV78_RS06425;Dbxref=Genbank:WP_015876242.1;Name=WP_015876242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423092.1;locus_tag=NIV78_RS06425;product=VOC family protein;protein_id=WP_015876242.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1397086 1398366 . + . ID=gene-NIV78_RS06430;Name=NIV78_RS06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06430 NZ_CP100136.1 Protein Homology CDS 1397086 1398366 . + 0 ID=cds-WP_015876241.1;Parent=gene-NIV78_RS06430;Dbxref=Genbank:WP_015876241.1;Name=WP_015876241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876241.1;locus_tag=NIV78_RS06430;product=PLP-dependent aminotransferase family protein;protein_id=WP_015876241.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1398470 1398667 . - . ID=gene-NIV78_RS06435;Name=NIV78_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06435 NZ_CP100136.1 GeneMarkS-2+ CDS 1398470 1398667 . - 0 ID=cds-WP_153477753.1;Parent=gene-NIV78_RS06435;Dbxref=Genbank:WP_153477753.1;Name=WP_153477753.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS06435;product=hypothetical protein;protein_id=WP_153477753.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1398810 1400291 . + . ID=gene-NIV78_RS06440;Name=NIV78_RS06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06440 NZ_CP100136.1 Protein Homology CDS 1398810 1400291 . + 0 ID=cds-WP_169512424.1;Parent=gene-NIV78_RS06440;Dbxref=Genbank:WP_169512424.1;Name=WP_169512424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697646.1;locus_tag=NIV78_RS06440;product=catalase;protein_id=WP_169512424.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1400443 1401054 . + . ID=gene-NIV78_RS06445;Name=NIV78_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06445 NZ_CP100136.1 Protein Homology CDS 1400443 1401054 . + 0 ID=cds-WP_017922910.1;Parent=gene-NIV78_RS06445;Dbxref=Genbank:WP_017922910.1;Name=WP_017922910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876239.1;locus_tag=NIV78_RS06445;product=ankyrin repeat domain-containing protein;protein_id=WP_017922910.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1401164 1402204 . - . ID=gene-NIV78_RS06450;Name=NIV78_RS06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06450 NZ_CP100136.1 Protein Homology CDS 1401164 1402204 . - 0 ID=cds-WP_017922909.1;Parent=gene-NIV78_RS06450;Dbxref=Genbank:WP_017922909.1;Name=WP_017922909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423095.1;locus_tag=NIV78_RS06450;product=questin oxidase family protein;protein_id=WP_017922909.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1402274 1402774 . + . ID=gene-NIV78_RS06455;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=NIV78_RS06455 NZ_CP100136.1 Protein Homology CDS 1402274 1402774 . + 0 ID=cds-WP_017423096.1;Parent=gene-NIV78_RS06455;Dbxref=Genbank:WP_017423096.1;Name=WP_017423096.1;Ontology_term=GO:0006355,GO:0006979,GO:0003677,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423096.1;locus_tag=NIV78_RS06455;product=redox-sensitive transcriptional activator SoxR;protein_id=WP_017423096.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1402788 1403615 . + . ID=gene-NIV78_RS06460;Name=NIV78_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06460 NZ_CP100136.1 Protein Homology CDS 1402788 1403615 . + 0 ID=cds-WP_257757319.1;Parent=gene-NIV78_RS06460;Dbxref=Genbank:WP_257757319.1;Name=WP_257757319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549089.1;locus_tag=NIV78_RS06460;product=class I SAM-dependent methyltransferase;protein_id=WP_257757319.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1403714 1404355 . + . ID=gene-NIV78_RS06465;Name=NIV78_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06465 NZ_CP100136.1 Protein Homology CDS 1403714 1404355 . + 0 ID=cds-WP_017922906.1;Parent=gene-NIV78_RS06465;Dbxref=Genbank:WP_017922906.1;Name=WP_017922906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876235.1;locus_tag=NIV78_RS06465;product=Type 1 glutamine amidotransferase-like domain-containing protein;protein_id=WP_017922906.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1404576 1404965 . + . ID=gene-NIV78_RS06470;Name=NIV78_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06470 NZ_CP100136.1 Protein Homology CDS 1404576 1404965 . + 0 ID=cds-WP_017922905.1;Parent=gene-NIV78_RS06470;Dbxref=Genbank:WP_017922905.1;Name=WP_017922905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876234.1;locus_tag=NIV78_RS06470;product=VOC family protein;protein_id=WP_017922905.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1405147 1405734 . + . ID=gene-NIV78_RS06475;Name=NIV78_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06475 NZ_CP100136.1 Protein Homology CDS 1405147 1405734 . + 0 ID=cds-WP_017433235.1;Parent=gene-NIV78_RS06475;Dbxref=Genbank:WP_017433235.1;Name=WP_017433235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423097.1;locus_tag=NIV78_RS06475;product=class I SAM-dependent methyltransferase;protein_id=WP_017433235.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1405812 1407104 . - . ID=gene-NIV78_RS06480;Name=NIV78_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06480 NZ_CP100136.1 Protein Homology CDS 1405812 1407104 . - 0 ID=cds-WP_017922904.1;Parent=gene-NIV78_RS06480;Dbxref=Genbank:WP_017922904.1;Name=WP_017922904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423098.1;locus_tag=NIV78_RS06480;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_017922904.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1407248 1407916 . + . ID=gene-NIV78_RS06485;Name=NIV78_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06485 NZ_CP100136.1 Protein Homology CDS 1407248 1407916 . + 0 ID=cds-WP_015876231.1;Parent=gene-NIV78_RS06485;Dbxref=Genbank:WP_015876231.1;Name=WP_015876231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876231.1;locus_tag=NIV78_RS06485;product=TetR/AcrR family transcriptional regulator;protein_id=WP_015876231.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 1407822 1408034 . + . ID=gene-NIV78_RS06490;Name=NIV78_RS06490;end_range=1408034,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS06490;partial=true;pseudo=true NZ_CP100136.1 Protein Homology CDS 1407822 1408034 . + 0 ID=cds-NIV78_RS06490;Parent=gene-NIV78_RS06490;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1408034,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013014.2;locus_tag=NIV78_RS06490;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 1408147 1409874 . - . ID=gene-NIV78_RS06495;Name=NIV78_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06495 NZ_CP100136.1 Protein Homology CDS 1408147 1409874 . - 0 ID=cds-WP_017923783.1;Parent=gene-NIV78_RS06495;Dbxref=Genbank:WP_017923783.1;Name=WP_017923783.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876230.1;locus_tag=NIV78_RS06495;product=methyl-accepting chemotaxis protein;protein_id=WP_017923783.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1410324 1411304 . - . ID=gene-NIV78_RS06500;Name=NIV78_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06500 NZ_CP100136.1 Protein Homology CDS 1410324 1411304 . - 0 ID=cds-WP_017423099.1;Parent=gene-NIV78_RS06500;Dbxref=Genbank:WP_017423099.1;Name=WP_017423099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876229.1;locus_tag=NIV78_RS06500;product=ABC transporter permease;protein_id=WP_017423099.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1411297 1412349 . - . ID=gene-NIV78_RS06505;Name=NIV78_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06505 NZ_CP100136.1 Protein Homology CDS 1411297 1412349 . - 0 ID=cds-WP_251107530.1;Parent=gene-NIV78_RS06505;Dbxref=Genbank:WP_251107530.1;Name=WP_251107530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876228.1;locus_tag=NIV78_RS06505;product=ABC transporter permease;protein_id=WP_251107530.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1412346 1413911 . - . ID=gene-NIV78_RS06510;Name=NIV78_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06510 NZ_CP100136.1 Protein Homology CDS 1412346 1413911 . - 0 ID=cds-WP_169511763.1;Parent=gene-NIV78_RS06510;Dbxref=Genbank:WP_169511763.1;Name=WP_169511763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423100.1;locus_tag=NIV78_RS06510;product=sugar ABC transporter ATP-binding protein;protein_id=WP_169511763.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1413908 1414912 . - . ID=gene-NIV78_RS06515;Name=NIV78_RS06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06515 NZ_CP100136.1 Protein Homology CDS 1413908 1414912 . - 0 ID=cds-WP_017423101.1;Parent=gene-NIV78_RS06515;Dbxref=Genbank:WP_017423101.1;Name=WP_017423101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423101.1;locus_tag=NIV78_RS06515;product=sugar ABC transporter substrate-binding protein;protein_id=WP_017423101.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1415712 1417397 . + . ID=gene-NIV78_RS06520;Name=NIV78_RS06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06520 NZ_CP100136.1 Protein Homology CDS 1415712 1417397 . + 0 ID=cds-WP_015876225.1;Parent=gene-NIV78_RS06520;Dbxref=Genbank:WP_015876225.1;Name=WP_015876225.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876225.1;locus_tag=NIV78_RS06520;product=methyl-accepting chemotaxis protein;protein_id=WP_015876225.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1417533 1418350 . + . ID=gene-NIV78_RS06525;Name=NIV78_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06525 NZ_CP100136.1 Protein Homology CDS 1417533 1417881 . + 0 ID=cds-WP_085962451.1-2;Parent=gene-NIV78_RS06525;Dbxref=Genbank:WP_085962451.1;Name=WP_085962451.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS06525;product=IS5 family transposase;protein_id=WP_085962451.1;transl_table=11 NZ_CP100136.1 Protein Homology CDS 1417881 1418350 . + 2 ID=cds-WP_085962451.1-2;Parent=gene-NIV78_RS06525;Dbxref=Genbank:WP_085962451.1;Name=WP_085962451.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS06525;product=IS5 family transposase;protein_id=WP_085962451.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1418654 1419166 . + . ID=gene-NIV78_RS06530;Name=NIV78_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06530 NZ_CP100136.1 Protein Homology CDS 1418654 1419166 . + 0 ID=cds-WP_017923279.1;Parent=gene-NIV78_RS06530;Dbxref=Genbank:WP_017923279.1;Name=WP_017923279.1;Ontology_term=GO:0006935,GO:0007165;gbkey=CDS;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876224.1;locus_tag=NIV78_RS06530;product=chemotaxis protein CheW;protein_id=WP_017923279.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 1419500 1419807 . + . ID=gene-NIV78_RS06535;Name=NIV78_RS06535;end_range=1419807,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS06535;partial=true;pseudo=true NZ_CP100136.1 Protein Homology CDS 1419500 1419807 . + 0 ID=cds-NIV78_RS06535;Parent=gene-NIV78_RS06535;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1419807,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558218.1;locus_tag=NIV78_RS06535;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 1420160 1420651 . + . ID=gene-NIV78_RS06540;Name=NIV78_RS06540;end_range=1420651,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS06540;partial=true;pseudo=true NZ_CP100136.1 Protein Homology CDS 1420160 1420651 . + 0 ID=cds-NIV78_RS06540;Parent=gene-NIV78_RS06540;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1420651,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011625997.1;locus_tag=NIV78_RS06540;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 1420801 1421101 . + . ID=gene-NIV78_RS06545;Name=NIV78_RS06545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS06545;partial=true;pseudo=true;start_range=.,1420801 NZ_CP100136.1 Protein Homology CDS 1420801 1421101 . + 0 ID=cds-NIV78_RS06545;Parent=gene-NIV78_RS06545;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS06545;partial=true;product=transposase;pseudo=true;start_range=.,1420801;transl_table=11 NZ_CP100136.1 RefSeq gene 1421365 1421619 . - . ID=gene-NIV78_RS06550;Name=NIV78_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06550 NZ_CP100136.1 Protein Homology CDS 1421365 1421619 . - 0 ID=cds-WP_017923280.1;Parent=gene-NIV78_RS06550;Dbxref=Genbank:WP_017923280.1;Name=WP_017923280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008923155.1;locus_tag=NIV78_RS06550;product=hypothetical protein;protein_id=WP_017923280.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1421600 1422118 . - . ID=gene-NIV78_RS06555;Name=NIV78_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06555 NZ_CP100136.1 Protein Homology CDS 1421600 1422118 . - 0 ID=cds-WP_017423104.1;Parent=gene-NIV78_RS06555;Dbxref=Genbank:WP_017423104.1;Name=WP_017423104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423104.1;locus_tag=NIV78_RS06555;product=DUF2778 domain-containing protein;protein_id=WP_017423104.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1422130 1422501 . - . ID=gene-NIV78_RS06560;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;locus_tag=NIV78_RS06560 NZ_CP100136.1 Protein Homology CDS 1422130 1422501 . - 0 ID=cds-WP_241766866.1;Parent=gene-NIV78_RS06560;Dbxref=Genbank:WP_241766866.1;Name=WP_241766866.1;Ontology_term=GO:0003674;gbkey=CDS;gene=hcp;go_function=molecular_function|0003674||IEA;inference=COORDINATES: protein motif:HMM:TIGR03344.1;locus_tag=NIV78_RS06560;product=type VI secretion system tube protein Hcp;protein_id=WP_241766866.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1422498 1422716 . - . ID=gene-NIV78_RS06565;Name=NIV78_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06565 NZ_CP100136.1 GeneMarkS-2+ CDS 1422498 1422716 . - 0 ID=cds-WP_237657742.1;Parent=gene-NIV78_RS06565;Dbxref=Genbank:WP_237657742.1;Name=WP_237657742.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS06565;product=hypothetical protein;protein_id=WP_237657742.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1423136 1424026 . - . ID=gene-NIV78_RS06570;Name=NIV78_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06570 NZ_CP100136.1 Protein Homology CDS 1423136 1424026 . - 0 ID=cds-WP_015876220.1;Parent=gene-NIV78_RS06570;Dbxref=Genbank:WP_015876220.1;Name=WP_015876220.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015411.2;locus_tag=NIV78_RS06570;product=NAD(P)-dependent oxidoreductase;protein_id=WP_015876220.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1424275 1425315 . + . ID=gene-NIV78_RS06575;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=NIV78_RS06575 NZ_CP100136.1 Protein Homology CDS 1424275 1425315 . + 0 ID=cds-WP_042968320.1;Parent=gene-NIV78_RS06575;Dbxref=Genbank:WP_042968320.1;Name=WP_042968320.1;Ontology_term=GO:0047834;gbkey=CDS;gene=mgrA;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876219.1;locus_tag=NIV78_RS06575;product=L-glyceraldehyde 3-phosphate reductase;protein_id=WP_042968320.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1425376 1425954 . - . ID=gene-NIV78_RS06580;Name=NIV78_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06580 NZ_CP100136.1 Protein Homology CDS 1425376 1425954 . - 0 ID=cds-WP_017923282.1;Parent=gene-NIV78_RS06580;Dbxref=Genbank:WP_017923282.1;Name=WP_017923282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876218.1;locus_tag=NIV78_RS06580;product=methyltransferase domain-containing protein;protein_id=WP_017923282.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1426301 1427197 . + . ID=gene-NIV78_RS06585;Name=NIV78_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06585 NZ_CP100136.1 Protein Homology CDS 1426301 1427197 . + 0 ID=cds-WP_051071187.1;Parent=gene-NIV78_RS06585;Dbxref=Genbank:WP_051071187.1;Name=WP_051071187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876217.1;locus_tag=NIV78_RS06585;product=MurR/RpiR family transcriptional regulator;protein_id=WP_051071187.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1427434 1430604 . + . ID=gene-NIV78_RS06590;Name=NIV78_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06590 NZ_CP100136.1 Protein Homology CDS 1427434 1430604 . + 0 ID=cds-WP_124836382.1;Parent=gene-NIV78_RS06590;Dbxref=Genbank:WP_124836382.1;Name=WP_124836382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876216.1;locus_tag=NIV78_RS06590;product=type VI secretion system tip protein VgrG;protein_id=WP_124836382.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1430663 1431079 . + . ID=gene-NIV78_RS06595;Name=NIV78_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06595 NZ_CP100136.1 Protein Homology CDS 1430663 1431079 . + 0 ID=cds-WP_015876215.1;Parent=gene-NIV78_RS06595;Dbxref=Genbank:WP_015876215.1;Name=WP_015876215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876215.1;locus_tag=NIV78_RS06595;product=hypothetical protein;protein_id=WP_015876215.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 1431084 1431421 . - . ID=gene-NIV78_RS06600;Name=NIV78_RS06600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS06600;partial=true;pseudo=true;start_range=.,1431084 NZ_CP100136.1 Protein Homology CDS 1431084 1431421 . - 0 ID=cds-NIV78_RS06600;Parent=gene-NIV78_RS06600;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013592781.1;locus_tag=NIV78_RS06600;partial=true;product=transposase;pseudo=true;start_range=.,1431084;transl_table=11 NZ_CP100136.1 RefSeq gene 1431759 1431980 . + . ID=gene-NIV78_RS06605;Name=NIV78_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06605 NZ_CP100136.1 GeneMarkS-2+ CDS 1431759 1431980 . + 0 ID=cds-WP_157384174.1;Parent=gene-NIV78_RS06605;Dbxref=Genbank:WP_157384174.1;Name=WP_157384174.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS06605;product=hypothetical protein;protein_id=WP_157384174.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1432184 1432654 . + . ID=gene-NIV78_RS06610;Name=NIV78_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06610 NZ_CP100136.1 Protein Homology CDS 1432184 1432654 . + 0 ID=cds-WP_237657743.1;Parent=gene-NIV78_RS06610;Dbxref=Genbank:WP_237657743.1;Name=WP_237657743.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876214.1;locus_tag=NIV78_RS06610;product=GNAT family N-acetyltransferase;protein_id=WP_237657743.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1432861 1434120 . - . ID=gene-NIV78_RS06615;Name=NIV78_RS06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06615 NZ_CP100136.1 Protein Homology CDS 1432861 1434120 . - 0 ID=cds-WP_045678924.1;Parent=gene-NIV78_RS06615;Dbxref=Genbank:WP_045678924.1;Name=WP_045678924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423068.1;locus_tag=NIV78_RS06615;product=MFS transporter;protein_id=WP_045678924.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1434282 1435334 . - . ID=gene-NIV78_RS06620;Name=NIV78_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06620 NZ_CP100136.1 Protein Homology CDS 1434282 1435334 . - 0 ID=cds-WP_100556603.1;Parent=gene-NIV78_RS06620;Dbxref=Genbank:WP_100556603.1;Name=WP_100556603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697679.1;locus_tag=NIV78_RS06620;product=ABC transporter substrate-binding protein;protein_id=WP_100556603.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1435596 1436261 . + . ID=gene-NIV78_RS06625;Name=NIV78_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06625 NZ_CP100136.1 Protein Homology CDS 1435596 1436261 . + 0 ID=cds-WP_015876211.1;Parent=gene-NIV78_RS06625;Dbxref=Genbank:WP_015876211.1;Name=WP_015876211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697680.1;locus_tag=NIV78_RS06625;product=response regulator transcription factor;protein_id=WP_015876211.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1436248 1437654 . + . ID=gene-NIV78_RS06630;Name=NIV78_RS06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06630 NZ_CP100136.1 Protein Homology CDS 1436248 1437654 . + 0 ID=cds-WP_015876210.1;Parent=gene-NIV78_RS06630;Dbxref=Genbank:WP_015876210.1;Name=WP_015876210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876210.1;locus_tag=NIV78_RS06630;product=sensor histidine kinase;protein_id=WP_015876210.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1437803 1439425 . - . ID=gene-NIV78_RS06635;Name=NIV78_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06635 NZ_CP100136.1 Protein Homology CDS 1437803 1439425 . - 0 ID=cds-WP_017923799.1;Parent=gene-NIV78_RS06635;Dbxref=Genbank:WP_017923799.1;Name=WP_017923799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876209.1;locus_tag=NIV78_RS06635;product=acid phosphatase;protein_id=WP_017923799.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1439627 1441057 . + . ID=gene-NIV78_RS06640;Name=NIV78_RS06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06640 NZ_CP100136.1 Protein Homology CDS 1439627 1441057 . + 0 ID=cds-WP_015876208.1;Parent=gene-NIV78_RS06640;Dbxref=Genbank:WP_015876208.1;Name=WP_015876208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697685.1;locus_tag=NIV78_RS06640;product=cytochrome-c peroxidase;protein_id=WP_015876208.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1441101 1441376 . + . ID=gene-NIV78_RS06645;Name=NIV78_RS06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06645 NZ_CP100136.1 GeneMarkS-2+ CDS 1441101 1441376 . + 0 ID=cds-WP_124836387.1;Parent=gene-NIV78_RS06645;Dbxref=Genbank:WP_124836387.1;Name=WP_124836387.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS06645;product=hypothetical protein;protein_id=WP_124836387.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1441382 1441858 . + . ID=gene-NIV78_RS06650;Name=NIV78_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06650 NZ_CP100136.1 Protein Homology CDS 1441382 1441858 . + 0 ID=cds-WP_017923868.1;Parent=gene-NIV78_RS06650;Dbxref=Genbank:WP_017923868.1;Name=WP_017923868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424934.1;locus_tag=NIV78_RS06650;product=NUDIX hydrolase;protein_id=WP_017923868.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1441939 1443648 . - . ID=gene-NIV78_RS06655;Name=NIV78_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06655 NZ_CP100136.1 Protein Homology CDS 1441939 1443648 . - 0 ID=cds-WP_017923867.1;Parent=gene-NIV78_RS06655;Dbxref=Genbank:WP_017923867.1;Name=WP_017923867.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876206.1;locus_tag=NIV78_RS06655;product=glutamine--tRNA ligase/YqeY domain fusion protein;protein_id=WP_017923867.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1443873 1444082 . + . ID=gene-NIV78_RS06660;Name=NIV78_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06660 NZ_CP100136.1 Protein Homology CDS 1443873 1444082 . + 0 ID=cds-WP_015876205.1;Parent=gene-NIV78_RS06660;Dbxref=Genbank:WP_015876205.1;Name=WP_015876205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010092621.1;locus_tag=NIV78_RS06660;product=ornithine acetyltransferase;protein_id=WP_015876205.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1444250 1445470 . - . ID=gene-NIV78_RS06665;Name=NIV78_RS06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06665 NZ_CP100136.1 Protein Homology CDS 1444250 1445470 . - 0 ID=cds-WP_035983801.1;Parent=gene-NIV78_RS06665;Dbxref=Genbank:WP_035983801.1;Name=WP_035983801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754069.1;locus_tag=NIV78_RS06665;product=CoA transferase;protein_id=WP_035983801.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1445825 1448449 . + . ID=gene-NIV78_RS06670;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=NIV78_RS06670 NZ_CP100136.1 Protein Homology CDS 1445825 1448449 . + 0 ID=cds-WP_017923430.1;Parent=gene-NIV78_RS06670;Dbxref=Genbank:WP_017923430.1;Name=WP_017923430.1;Ontology_term=GO:0006419,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012401005.1;locus_tag=NIV78_RS06670;product=alanine--tRNA ligase;protein_id=WP_017923430.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1448763 1449125 . + . ID=gene-NIV78_RS06675;Name=NIV78_RS06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06675 NZ_CP100136.1 GeneMarkS-2+ CDS 1448763 1449125 . + 0 ID=cds-WP_241766879.1;Parent=gene-NIV78_RS06675;Dbxref=Genbank:WP_241766879.1;Name=WP_241766879.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS06675;product=hypothetical protein;protein_id=WP_241766879.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1450127 1451047 . + . ID=gene-NIV78_RS06680;Name=NIV78_RS06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06680 NZ_CP100136.1 Protein Homology CDS 1450127 1451047 . + 0 ID=cds-WP_017923429.1;Parent=gene-NIV78_RS06680;Dbxref=Genbank:WP_017923429.1;Name=WP_017923429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327799.1;locus_tag=NIV78_RS06680;product=DUF3304 domain-containing protein;protein_id=WP_017923429.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 1451241 1452103 . + . ID=gene-NIV78_RS06685;Name=NIV78_RS06685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS06685;partial=true;pseudo=true;start_range=.,1451241 NZ_CP100136.1 Protein Homology CDS 1451241 1452103 . + 0 ID=cds-NIV78_RS06685;Parent=gene-NIV78_RS06685;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558218.1;locus_tag=NIV78_RS06685;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1451241;transl_table=11 NZ_CP100136.1 RefSeq gene 1452183 1453253 . - . ID=gene-NIV78_RS06690;Name=NIV78_RS06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06690 NZ_CP100136.1 Protein Homology CDS 1452183 1453253 . - 0 ID=cds-WP_124836389.1;Parent=gene-NIV78_RS06690;Dbxref=Genbank:WP_124836389.1;Name=WP_124836389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876200.1;locus_tag=NIV78_RS06690;product=galactose mutarotase;protein_id=WP_124836389.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1453250 1454473 . - . ID=gene-NIV78_RS06695;Name=NIV78_RS06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06695 NZ_CP100136.1 Protein Homology CDS 1453250 1454473 . - 0 ID=cds-WP_017924384.1;Parent=gene-NIV78_RS06695;Dbxref=Genbank:WP_017924384.1;Name=WP_017924384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697695.1;locus_tag=NIV78_RS06695;product=DNA-binding transcriptional regulator;protein_id=WP_017924384.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1454790 1455818 . + . ID=gene-NIV78_RS06700;Name=xylF;gbkey=Gene;gene=xylF;gene_biotype=protein_coding;locus_tag=NIV78_RS06700 NZ_CP100136.1 Protein Homology CDS 1454790 1455818 . + 0 ID=cds-WP_015876198.1;Parent=gene-NIV78_RS06700;Dbxref=Genbank:WP_015876198.1;Name=WP_015876198.1;Ontology_term=GO:0015753,GO:0015614,GO:0033222,GO:0030288,GO:0031362,GO:0055052;gbkey=CDS;gene=xylF;go_component=outer membrane-bounded periplasmic space|0030288||IEA,anchored component of external side of plasma membrane|0031362||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type D-xylose transporter activity|0015614||IEA,xylose binding|0033222||IEA;go_process=D-xylose transmembrane transport|0015753||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876198.1;locus_tag=NIV78_RS06700;product=D-xylose ABC transporter substrate-binding protein;protein_id=WP_015876198.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1455907 1457466 . + . ID=gene-NIV78_RS06705;Name=xylG;gbkey=Gene;gene=xylG;gene_biotype=protein_coding;locus_tag=NIV78_RS06705 NZ_CP100136.1 Protein Homology CDS 1455907 1457466 . + 0 ID=cds-WP_015876197.1;Parent=gene-NIV78_RS06705;Dbxref=Genbank:WP_015876197.1;Name=WP_015876197.1;Ontology_term=GO:0015753,GO:0005524,GO:0015614,GO:0009898,GO:0055052;gbkey=CDS;gene=xylG;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-xylose transporter activity|0015614||IEA;go_process=D-xylose transmembrane transport|0015753||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697697.1;locus_tag=NIV78_RS06705;product=D-xylose ABC transporter ATP-binding protein;protein_id=WP_015876197.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1457463 1458665 . + . ID=gene-NIV78_RS06710;Name=gguB;gbkey=Gene;gene=gguB;gene_biotype=protein_coding;locus_tag=NIV78_RS06710 NZ_CP100136.1 Protein Homology CDS 1457463 1458665 . + 0 ID=cds-WP_017923591.1;Parent=gene-NIV78_RS06710;Dbxref=Genbank:WP_017923591.1;Name=WP_017923591.1;Ontology_term=GO:0043190;gbkey=CDS;gene=gguB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006047720.1;locus_tag=NIV78_RS06710;product=sugar ABC transporter permease;protein_id=WP_017923591.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1458727 1459494 . + . ID=gene-NIV78_RS06715;Name=NIV78_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06715 NZ_CP100136.1 Protein Homology CDS 1458727 1459494 . + 0 ID=cds-WP_017923590.1;Parent=gene-NIV78_RS06715;Dbxref=Genbank:WP_017923590.1;Name=WP_017923590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012430167.1;locus_tag=NIV78_RS06715;product=SDR family oxidoreductase;protein_id=WP_017923590.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1459491 1460384 . + . ID=gene-NIV78_RS06720;Name=NIV78_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06720 NZ_CP100136.1 Protein Homology CDS 1459491 1460384 . + 0 ID=cds-WP_017923589.1;Parent=gene-NIV78_RS06720;Dbxref=Genbank:WP_017923589.1;Name=WP_017923589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876194.1;locus_tag=NIV78_RS06720;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_017923589.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1460532 1461068 . + . ID=gene-NIV78_RS06725;Name=NIV78_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06725 NZ_CP100136.1 Protein Homology CDS 1460532 1461068 . + 0 ID=cds-WP_017924586.1;Parent=gene-NIV78_RS06725;Dbxref=Genbank:WP_017924586.1;Name=WP_017924586.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494058.1;locus_tag=NIV78_RS06725;product=NUDIX domain-containing protein;protein_id=WP_017924586.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1461094 1461435 . - . ID=gene-NIV78_RS06730;Name=NIV78_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06730 NZ_CP100136.1 Protein Homology CDS 1461094 1461435 . - 0 ID=cds-WP_015876192.1;Parent=gene-NIV78_RS06730;Dbxref=Genbank:WP_015876192.1;Name=WP_015876192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876192.1;locus_tag=NIV78_RS06730;product=YbjQ family protein;protein_id=WP_015876192.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1461696 1462157 . + . ID=gene-NIV78_RS06735;Name=NIV78_RS06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06735 NZ_CP100136.1 Protein Homology CDS 1461696 1462157 . + 0 ID=cds-WP_015876191.1;Parent=gene-NIV78_RS06735;Dbxref=Genbank:WP_015876191.1;Name=WP_015876191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004542523.1;locus_tag=NIV78_RS06735;product=acyl-CoA thioesterase;protein_id=WP_015876191.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1462217 1463086 . - . ID=gene-NIV78_RS06740;Name=iolB;gbkey=Gene;gene=iolB;gene_biotype=protein_coding;locus_tag=NIV78_RS06740 NZ_CP100136.1 Protein Homology CDS 1462217 1463086 . - 0 ID=cds-WP_017924682.1;Parent=gene-NIV78_RS06740;Dbxref=Genbank:WP_017924682.1;Name=WP_017924682.1;Ontology_term=GO:0019310,GO:0016861;gbkey=CDS;gene=iolB;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876190.1;locus_tag=NIV78_RS06740;product=5-deoxy-glucuronate isomerase;protein_id=WP_017924682.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1463086 1464003 . - . ID=gene-NIV78_RS06745;Name=iolE;gbkey=Gene;gene=iolE;gene_biotype=protein_coding;locus_tag=NIV78_RS06745 NZ_CP100136.1 Protein Homology CDS 1463086 1464003 . - 0 ID=cds-WP_015876189.1;Parent=gene-NIV78_RS06745;Dbxref=Genbank:WP_015876189.1;Name=WP_015876189.1;Ontology_term=GO:0019310,GO:0050114;gbkey=CDS;gene=iolE;go_function=myo-inosose-2 dehydratase activity|0050114||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009980605.1;locus_tag=NIV78_RS06745;product=myo-inosose-2 dehydratase;protein_id=WP_015876189.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1464000 1466030 . - . ID=gene-NIV78_RS06750;Name=iolD;gbkey=Gene;gene=iolD;gene_biotype=protein_coding;locus_tag=NIV78_RS06750 NZ_CP100136.1 Protein Homology CDS 1464000 1466030 . - 0 ID=cds-WP_124836391.1;Parent=gene-NIV78_RS06750;Dbxref=Genbank:WP_124836391.1;Name=WP_124836391.1;Ontology_term=GO:0019310,GO:0000287,GO:0016823,GO:0030976;gbkey=CDS;gene=iolD;go_function=magnesium ion binding|0000287||IEA,hydrolase activity%2C acting on acid carbon-carbon bonds%2C in ketonic substances|0016823||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876188.1;locus_tag=NIV78_RS06750;product=3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione acylhydrolase (decyclizing);protein_id=WP_124836391.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1466042 1468018 . - . ID=gene-NIV78_RS06755;Name=iolC;gbkey=Gene;gene=iolC;gene_biotype=protein_coding;locus_tag=NIV78_RS06755 NZ_CP100136.1 Protein Homology CDS 1466042 1468018 . - 0 ID=cds-WP_017923252.1;Parent=gene-NIV78_RS06755;Dbxref=Genbank:WP_017923252.1;Name=WP_017923252.1;Ontology_term=GO:0019310,GO:0047590;gbkey=CDS;gene=iolC;go_function=5-dehydro-2-deoxygluconokinase activity|0047590||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697712.1;locus_tag=NIV78_RS06755;product=5-dehydro-2-deoxygluconokinase;protein_id=WP_017923252.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1468037 1468861 . - . ID=gene-NIV78_RS06760;Name=NIV78_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06760 NZ_CP100136.1 Protein Homology CDS 1468037 1468861 . - 0 ID=cds-WP_017923251.1;Parent=gene-NIV78_RS06760;Dbxref=Genbank:WP_017923251.1;Name=WP_017923251.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019256136.1;locus_tag=NIV78_RS06760;product=ATP-binding cassette domain-containing protein;protein_id=WP_017923251.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1468874 1470019 . - . ID=gene-NIV78_RS06765;Name=NIV78_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06765 NZ_CP100136.1 Protein Homology CDS 1468874 1470019 . - 0 ID=cds-WP_015876185.1;Parent=gene-NIV78_RS06765;Dbxref=Genbank:WP_015876185.1;Name=WP_015876185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192697.1;locus_tag=NIV78_RS06765;product=ABC transporter permease;protein_id=WP_015876185.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1470162 1471238 . - . ID=gene-NIV78_RS06770;Name=NIV78_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06770 NZ_CP100136.1 Protein Homology CDS 1470162 1471238 . - 0 ID=cds-WP_017424392.1;Parent=gene-NIV78_RS06770;Dbxref=Genbank:WP_017424392.1;Name=WP_017424392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424392.1;locus_tag=NIV78_RS06770;product=sugar ABC transporter substrate-binding protein;protein_id=WP_017424392.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1471455 1472333 . + . ID=gene-NIV78_RS06775;Name=NIV78_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06775 NZ_CP100136.1 Protein Homology CDS 1471455 1472333 . + 0 ID=cds-WP_043225790.1;Parent=gene-NIV78_RS06775;Dbxref=Genbank:WP_043225790.1;Name=WP_043225790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009891665.1;locus_tag=NIV78_RS06775;product=MurR/RpiR family transcriptional regulator;protein_id=WP_043225790.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1472326 1473354 . + . ID=gene-NIV78_RS06780;Name=iolG;gbkey=Gene;gene=iolG;gene_biotype=protein_coding;locus_tag=NIV78_RS06780 NZ_CP100136.1 Protein Homology CDS 1472326 1473354 . + 0 ID=cds-WP_017923249.1;Parent=gene-NIV78_RS06780;Dbxref=Genbank:WP_017923249.1;Name=WP_017923249.1;Ontology_term=GO:0019310,GO:0050112;gbkey=CDS;gene=iolG;go_function=inositol 2-dehydrogenase activity|0050112||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876182.1;locus_tag=NIV78_RS06780;product=inositol 2-dehydrogenase;protein_id=WP_017923249.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1473365 1474405 . + . ID=gene-NIV78_RS06785;Name=NIV78_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06785 NZ_CP100136.1 Protein Homology CDS 1473365 1474405 . + 0 ID=cds-WP_015876181.1;Parent=gene-NIV78_RS06785;Dbxref=Genbank:WP_015876181.1;Name=WP_015876181.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697718.1;locus_tag=NIV78_RS06785;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_015876181.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1474563 1474790 . + . ID=gene-NIV78_RS06790;Name=NIV78_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06790 NZ_CP100136.1 Protein Homology CDS 1474563 1474790 . + 0 ID=cds-WP_015876180.1;Parent=gene-NIV78_RS06790;Dbxref=Genbank:WP_015876180.1;Name=WP_015876180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026473.1;locus_tag=NIV78_RS06790;product=sulfurtransferase TusA family protein;protein_id=WP_015876180.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1475618 1476322 . + . ID=gene-NIV78_RS06795;Name=NIV78_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06795 NZ_CP100136.1 Protein Homology CDS 1475618 1476322 . + 0 ID=cds-WP_015876179.1;Parent=gene-NIV78_RS06795;Dbxref=Genbank:WP_015876179.1;Name=WP_015876179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193573.1;locus_tag=NIV78_RS06795;product=response regulator transcription factor;protein_id=WP_015876179.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1476319 1477773 . + . ID=gene-NIV78_RS06800;Name=NIV78_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06800 NZ_CP100136.1 Protein Homology CDS 1476319 1477773 . + 0 ID=cds-WP_124836393.1;Parent=gene-NIV78_RS06800;Dbxref=Genbank:WP_124836393.1;Name=WP_124836393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876178.1;locus_tag=NIV78_RS06800;product=FecR domain-containing protein;protein_id=WP_124836393.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1477782 1480232 . + . ID=gene-NIV78_RS06805;Name=NIV78_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06805 NZ_CP100136.1 Protein Homology CDS 1477782 1480232 . + 0 ID=cds-WP_124836394.1;Parent=gene-NIV78_RS06805;Dbxref=Genbank:WP_124836394.1;Name=WP_124836394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876177.1;locus_tag=NIV78_RS06805;product=CHASE2 domain-containing protein;protein_id=WP_124836394.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1480307 1480921 . + . ID=gene-NIV78_RS06810;Name=NIV78_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06810 NZ_CP100136.1 Protein Homology CDS 1480307 1480921 . + 0 ID=cds-WP_124836395.1;Parent=gene-NIV78_RS06810;Dbxref=Genbank:WP_124836395.1;Name=WP_124836395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876176.1;locus_tag=NIV78_RS06810;product=DUF4136 domain-containing protein;protein_id=WP_124836395.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1481191 1483056 . + . ID=gene-NIV78_RS06815;Name=NIV78_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06815 NZ_CP100136.1 Protein Homology CDS 1481191 1483056 . + 0 ID=cds-WP_015876175.1;Parent=gene-NIV78_RS06815;Dbxref=Genbank:WP_015876175.1;Name=WP_015876175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876175.1;locus_tag=NIV78_RS06815;product=hypothetical protein;protein_id=WP_015876175.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1483201 1484082 . - . ID=gene-NIV78_RS06820;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=NIV78_RS06820 NZ_CP100136.1 Protein Homology CDS 1483201 1484082 . - 0 ID=cds-WP_017923503.1;Parent=gene-NIV78_RS06820;Dbxref=Genbank:WP_017923503.1;Name=WP_017923503.1;Ontology_term=GO:0009225,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876174.1;locus_tag=NIV78_RS06820;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_017923503.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1484171 1487041 . - . ID=gene-NIV78_RS06825;Name=NIV78_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06825 NZ_CP100136.1 Protein Homology CDS 1484171 1487041 . - 0 ID=cds-WP_257757325.1;Parent=gene-NIV78_RS06825;Dbxref=Genbank:WP_257757325.1;Name=WP_257757325.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876173.1;locus_tag=NIV78_RS06825;product=valine--tRNA ligase;protein_id=WP_257757325.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1487336 1489705 . + . ID=gene-NIV78_RS06830;Name=NIV78_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06830 NZ_CP100136.1 Protein Homology CDS 1487336 1489705 . + 0 ID=cds-WP_015876172.1;Parent=gene-NIV78_RS06830;Dbxref=Genbank:WP_015876172.1;Name=WP_015876172.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404978.1;locus_tag=NIV78_RS06830;product=UvrD-helicase domain-containing protein;protein_id=WP_015876172.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1489711 1490517 . + . ID=gene-NIV78_RS06835;Name=NIV78_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06835 NZ_CP100136.1 Protein Homology CDS 1489711 1490517 . + 0 ID=cds-WP_015876171.1;Parent=gene-NIV78_RS06835;Dbxref=Genbank:WP_015876171.1;Name=WP_015876171.1;Ontology_term=GO:0009116,GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside metabolic process|0009116||IEA,nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876171.1;locus_tag=NIV78_RS06835;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;protein_id=WP_015876171.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1490619 1491866 . - . ID=gene-NIV78_RS06840;Name=NIV78_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06840 NZ_CP100136.1 Protein Homology CDS 1490619 1491866 . - 0 ID=cds-WP_015876170.1;Parent=gene-NIV78_RS06840;Dbxref=Genbank:WP_015876170.1;Name=WP_015876170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697731.1;locus_tag=NIV78_RS06840;product=MFS transporter;protein_id=WP_015876170.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1492227 1493906 . + . ID=gene-NIV78_RS06845;Name=NIV78_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06845 NZ_CP100136.1 Protein Homology CDS 1492227 1493906 . + 0 ID=cds-WP_015876169.1;Parent=gene-NIV78_RS06845;Dbxref=Genbank:WP_015876169.1;Name=WP_015876169.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697732.1;locus_tag=NIV78_RS06845;product=methyl-accepting chemotaxis protein;protein_id=WP_015876169.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1493977 1494924 . - . ID=gene-NIV78_RS06850;Name=NIV78_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06850 NZ_CP100136.1 Protein Homology CDS 1493977 1494924 . - 0 ID=cds-WP_124836398.1;Parent=gene-NIV78_RS06850;Dbxref=Genbank:WP_124836398.1;Name=WP_124836398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876168.1;locus_tag=NIV78_RS06850;product=HlyD family secretion protein;protein_id=WP_124836398.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1494938 1495141 . - . ID=gene-NIV78_RS06855;Name=NIV78_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06855 NZ_CP100136.1 Protein Homology CDS 1494938 1495141 . - 0 ID=cds-WP_015876167.1;Parent=gene-NIV78_RS06855;Dbxref=Genbank:WP_015876167.1;Name=WP_015876167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009891634.1;locus_tag=NIV78_RS06855;product=DUF1656 domain-containing protein;protein_id=WP_015876167.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1495138 1497354 . - . ID=gene-NIV78_RS06860;Name=NIV78_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06860 NZ_CP100136.1 Protein Homology CDS 1495138 1497354 . - 0 ID=cds-WP_257757326.1;Parent=gene-NIV78_RS06860;Dbxref=Genbank:WP_257757326.1;Name=WP_257757326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876166.1;locus_tag=NIV78_RS06860;product=FUSC family protein;protein_id=WP_257757326.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1497367 1498845 . - . ID=gene-NIV78_RS06865;Name=NIV78_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06865 NZ_CP100136.1 Protein Homology CDS 1497367 1498845 . - 0 ID=cds-WP_230674414.1;Parent=gene-NIV78_RS06865;Dbxref=Genbank:WP_230674414.1;Name=WP_230674414.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697736.1;locus_tag=NIV78_RS06865;product=efflux transporter outer membrane subunit;protein_id=WP_230674414.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1499052 1499993 . + . ID=gene-NIV78_RS06870;Name=NIV78_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06870 NZ_CP100136.1 Protein Homology CDS 1499052 1499993 . + 0 ID=cds-WP_015876164.1;Parent=gene-NIV78_RS06870;Dbxref=Genbank:WP_015876164.1;Name=WP_015876164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010115732.1;locus_tag=NIV78_RS06870;product=LysR family transcriptional regulator;protein_id=WP_015876164.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1500122 1500271 . + . ID=gene-NIV78_RS06875;Name=NIV78_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06875 NZ_CP100136.1 Protein Homology CDS 1500122 1500271 . + 0 ID=cds-WP_017433449.1;Parent=gene-NIV78_RS06875;Dbxref=Genbank:WP_017433449.1;Name=WP_017433449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007585434.1;locus_tag=NIV78_RS06875;product=hypothetical protein;protein_id=WP_017433449.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1500832 1501755 . + . ID=gene-NIV78_RS06880;Name=NIV78_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06880 NZ_CP100136.1 Protein Homology CDS 1500832 1501755 . + 0 ID=cds-WP_015876163.1;Parent=gene-NIV78_RS06880;Dbxref=Genbank:WP_015876163.1;Name=WP_015876163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876163.1;locus_tag=NIV78_RS06880;product=dihydrodipicolinate synthase family protein;protein_id=WP_015876163.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 1502052 1502909 . + . ID=gene-NIV78_RS06885;Name=NIV78_RS06885;end_range=1502909,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS06885;partial=true;pseudo=true NZ_CP100136.1 Protein Homology CDS 1502052 1502909 . + 0 ID=cds-NIV78_RS06885;Parent=gene-NIV78_RS06885;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1502909,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876162.1;locus_tag=NIV78_RS06885;partial=true;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 1502921 1503738 . - . ID=gene-NIV78_RS06890;Name=NIV78_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06890 NZ_CP100136.1 Protein Homology CDS 1503390 1503738 . - 0 ID=cds-WP_085962362.1-2;Parent=gene-NIV78_RS06890;Dbxref=Genbank:WP_085962362.1;Name=WP_085962362.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS06890;product=IS5 family transposase;protein_id=WP_085962362.1;transl_table=11 NZ_CP100136.1 Protein Homology CDS 1502921 1503390 . - 2 ID=cds-WP_085962362.1-2;Parent=gene-NIV78_RS06890;Dbxref=Genbank:WP_085962362.1;Name=WP_085962362.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS06890;product=IS5 family transposase;protein_id=WP_085962362.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1503833 1504363 . + . ID=gene-NIV78_RS06895;Name=NIV78_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06895 NZ_CP100136.1 Protein Homology CDS 1503833 1504363 . + 0 ID=cds-WP_257757327.1;Parent=gene-NIV78_RS06895;Dbxref=Genbank:WP_257757327.1;Name=WP_257757327.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.2;locus_tag=NIV78_RS06895;product=MFS transporter;protein_id=WP_257757327.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1504594 1505658 . - . ID=gene-NIV78_RS06900;Name=NIV78_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06900 NZ_CP100136.1 Protein Homology CDS 1504594 1505658 . - 0 ID=cds-WP_017923594.1;Parent=gene-NIV78_RS06900;Dbxref=Genbank:WP_017923594.1;Name=WP_017923594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020379644.1;locus_tag=NIV78_RS06900;product=porin;protein_id=WP_017923594.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1506030 1506824 . + . ID=gene-NIV78_RS06905;Name=NIV78_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06905 NZ_CP100136.1 Protein Homology CDS 1506030 1506824 . + 0 ID=cds-WP_241766890.1;Parent=gene-NIV78_RS06905;Dbxref=Genbank:WP_241766890.1;Name=WP_241766890.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.2;locus_tag=NIV78_RS06905;product=LysR substrate-binding domain-containing protein;protein_id=WP_241766890.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1506921 1507967 . + . ID=gene-NIV78_RS06910;Name=NIV78_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06910 NZ_CP100136.1 Protein Homology CDS 1506921 1507967 . + 0 ID=cds-WP_257757132.1-3;Parent=gene-NIV78_RS06910;Dbxref=Genbank:WP_257757132.1;Name=WP_257757132.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734099.1;locus_tag=NIV78_RS06910;product=IS481 family transposase;protein_id=WP_257757132.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1508341 1509141 . - . ID=gene-NIV78_RS06915;Name=NIV78_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06915 NZ_CP100136.1 Protein Homology CDS 1508341 1509141 . - 0 ID=cds-WP_015876157.1;Parent=gene-NIV78_RS06915;Dbxref=Genbank:WP_015876157.1;Name=WP_015876157.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011798280.1;locus_tag=NIV78_RS06915;product=metallophosphoesterase;protein_id=WP_015876157.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1509391 1510812 . - . ID=gene-NIV78_RS06920;Name=NIV78_RS06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06920 NZ_CP100136.1 Protein Homology CDS 1509391 1510812 . - 0 ID=cds-WP_017924172.1;Parent=gene-NIV78_RS06920;Dbxref=Genbank:WP_017924172.1;Name=WP_017924172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545230.1;locus_tag=NIV78_RS06920;product=FAD-binding oxidoreductase;protein_id=WP_017924172.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1510833 1511339 . - . ID=gene-NIV78_RS06925;Name=NIV78_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06925 NZ_CP100136.1 Protein Homology CDS 1510833 1511339 . - 0 ID=cds-WP_251107522.1;Parent=gene-NIV78_RS06925;Dbxref=Genbank:WP_251107522.1;Name=WP_251107522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656652.1;locus_tag=NIV78_RS06925;product=DUF2069 domain-containing protein;protein_id=WP_251107522.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1511350 1511958 . - . ID=gene-NIV78_RS06930;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=NIV78_RS06930 NZ_CP100136.1 Protein Homology CDS 1511350 1511958 . - 0 ID=cds-WP_015876154.1;Parent=gene-NIV78_RS06930;Dbxref=Genbank:WP_015876154.1;Name=WP_015876154.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697740.1;locus_tag=NIV78_RS06930;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_015876154.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1512042 1513346 . + . ID=gene-NIV78_RS06935;Name=NIV78_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06935 NZ_CP100136.1 Protein Homology CDS 1512042 1513346 . + 0 ID=cds-WP_035983455.1;Parent=gene-NIV78_RS06935;Dbxref=Genbank:WP_035983455.1;Name=WP_035983455.1;Ontology_term=GO:0008150,GO:0003674,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010115728.1;locus_tag=NIV78_RS06935;product=YihY family inner membrane protein;protein_id=WP_035983455.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1513448 1513768 . - . ID=gene-NIV78_RS06940;Name=NIV78_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06940 NZ_CP100136.1 Protein Homology CDS 1513448 1513768 . - 0 ID=cds-WP_026051341.1;Parent=gene-NIV78_RS06940;Dbxref=Genbank:WP_026051341.1;Name=WP_026051341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009905783.1;locus_tag=NIV78_RS06940;product=DUF962 domain-containing protein;protein_id=WP_026051341.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1513949 1514419 . + . ID=gene-NIV78_RS06945;Name=NIV78_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06945 NZ_CP100136.1 Protein Homology CDS 1513949 1514419 . + 0 ID=cds-WP_015876151.1;Parent=gene-NIV78_RS06945;Dbxref=Genbank:WP_015876151.1;Name=WP_015876151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026496.1;locus_tag=NIV78_RS06945;product=CBS domain-containing protein;protein_id=WP_015876151.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1514569 1516503 . + . ID=gene-NIV78_RS06950;Name=NIV78_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06950 NZ_CP100136.1 Protein Homology CDS 1514569 1516503 . + 0 ID=cds-WP_015876150.1;Parent=gene-NIV78_RS06950;Dbxref=Genbank:WP_015876150.1;Name=WP_015876150.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697744.1;locus_tag=NIV78_RS06950;product=MFS transporter;protein_id=WP_015876150.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1516630 1517730 . + . ID=gene-NIV78_RS06955;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=NIV78_RS06955 NZ_CP100136.1 Protein Homology CDS 1516630 1517730 . + 0 ID=cds-WP_015876149.1;Parent=gene-NIV78_RS06955;Dbxref=Genbank:WP_015876149.1;Name=WP_015876149.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697745.1;locus_tag=NIV78_RS06955;product=chorismate synthase;protein_id=WP_015876149.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1517849 1519522 . - . ID=gene-NIV78_RS06960;Name=NIV78_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06960 NZ_CP100136.1 Protein Homology CDS 1517849 1519522 . - 0 ID=cds-WP_015876148.1;Parent=gene-NIV78_RS06960;Dbxref=Genbank:WP_015876148.1;Name=WP_015876148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015003297.1;locus_tag=NIV78_RS06960;product=electron transfer flavoprotein-ubiquinone oxidoreductase;protein_id=WP_015876148.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1519692 1520468 . + . ID=gene-NIV78_RS06965;Name=NIV78_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06965 NZ_CP100136.1 Protein Homology CDS 1519692 1520468 . + 0 ID=cds-WP_257757328.1;Parent=gene-NIV78_RS06965;Dbxref=Genbank:WP_257757328.1;Name=WP_257757328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602148.1;locus_tag=NIV78_RS06965;product=SDR family oxidoreductase;protein_id=WP_257757328.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1520497 1520928 . + . ID=gene-NIV78_RS06970;Name=NIV78_RS06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06970 NZ_CP100136.1 Protein Homology CDS 1520497 1520928 . + 0 ID=cds-WP_015876146.1;Parent=gene-NIV78_RS06970;Dbxref=Genbank:WP_015876146.1;Name=WP_015876146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402091.1;locus_tag=NIV78_RS06970;product=acyl-CoA thioesterase;protein_id=WP_015876146.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1520987 1521532 . - . ID=gene-NIV78_RS06975;Name=NIV78_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06975 NZ_CP100136.1 Protein Homology CDS 1520987 1521532 . - 0 ID=cds-WP_015876145.1;Parent=gene-NIV78_RS06975;Dbxref=Genbank:WP_015876145.1;Name=WP_015876145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026504.1;locus_tag=NIV78_RS06975;product=PAS and helix-turn-helix domain-containing protein;protein_id=WP_015876145.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1521771 1522475 . + . ID=gene-NIV78_RS06980;Name=NIV78_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06980 NZ_CP100136.1 Protein Homology CDS 1521771 1522475 . + 0 ID=cds-WP_017424584.1;Parent=gene-NIV78_RS06980;Dbxref=Genbank:WP_017424584.1;Name=WP_017424584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009891596.1;locus_tag=NIV78_RS06980;product=CoA transferase subunit A;protein_id=WP_017424584.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1522477 1523118 . + . ID=gene-NIV78_RS06985;Name=NIV78_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06985 NZ_CP100136.1 Protein Homology CDS 1522477 1523118 . + 0 ID=cds-WP_015876143.1;Parent=gene-NIV78_RS06985;Dbxref=Genbank:WP_015876143.1;Name=WP_015876143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402088.1;locus_tag=NIV78_RS06985;product=CoA transferase subunit B;protein_id=WP_015876143.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1523264 1524166 . + . ID=gene-NIV78_RS06990;Name=NIV78_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06990 NZ_CP100136.1 Protein Homology CDS 1523264 1524166 . + 0 ID=cds-WP_015876142.1;Parent=gene-NIV78_RS06990;Dbxref=Genbank:WP_015876142.1;Name=WP_015876142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876142.1;locus_tag=NIV78_RS06990;product=alpha/beta hydrolase;protein_id=WP_015876142.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1524240 1524593 . + . ID=gene-NIV78_RS06995;Name=NIV78_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS06995 NZ_CP100136.1 Protein Homology CDS 1524240 1524593 . + 0 ID=cds-WP_015876141.1;Parent=gene-NIV78_RS06995;Dbxref=Genbank:WP_015876141.1;Name=WP_015876141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486103.1;locus_tag=NIV78_RS06995;product=RidA family protein;protein_id=WP_015876141.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1524643 1526871 . + . ID=gene-NIV78_RS07000;Name=NIV78_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07000 NZ_CP100136.1 Protein Homology CDS 1524643 1526871 . + 0 ID=cds-WP_017423425.1;Parent=gene-NIV78_RS07000;Dbxref=Genbank:WP_017423425.1;Name=WP_017423425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423425.1;locus_tag=NIV78_RS07000;product=bifunctional (p)ppGpp synthetase/guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=WP_017423425.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1526961 1527037 . + . ID=gene-NIV78_RS07005;Name=NIV78_RS07005;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS07005 NZ_CP100136.1 tRNAscan-SE tRNA 1526961 1527037 . + . ID=rna-NIV78_RS07005;Parent=gene-NIV78_RS07005;anticodon=(pos:1526995..1526997);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS07005;product=tRNA-Val NZ_CP100136.1 tRNAscan-SE exon 1526961 1527037 . + . ID=exon-NIV78_RS07005-1;Parent=rna-NIV78_RS07005;anticodon=(pos:1526995..1526997);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS07005;product=tRNA-Val NZ_CP100136.1 RefSeq gene 1527281 1529188 . + . ID=gene-NIV78_RS07010;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=NIV78_RS07010 NZ_CP100136.1 Protein Homology CDS 1527281 1529188 . + 0 ID=cds-WP_017922560.1;Parent=gene-NIV78_RS07010;Dbxref=Genbank:WP_017922560.1;Name=WP_017922560.1;Ontology_term=GO:0006435,GO:0004829,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191232.1;locus_tag=NIV78_RS07010;product=threonine--tRNA ligase;protein_id=WP_017922560.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1529238 1529762 . + . ID=gene-NIV78_RS07015;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=NIV78_RS07015 NZ_CP100136.1 Protein Homology CDS 1529238 1529762 . + 0 ID=cds-WP_080569308.1;Parent=gene-NIV78_RS07015;Dbxref=Genbank:WP_080569308.1;Name=WP_080569308.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012435921.1;locus_tag=NIV78_RS07015;product=translation initiation factor IF-3;protein_id=WP_080569308.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1529951 1530148 . + . ID=gene-NIV78_RS07020;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=NIV78_RS07020 NZ_CP100136.1 Protein Homology CDS 1529951 1530148 . + 0 ID=cds-WP_004191477.1;Parent=gene-NIV78_RS07020;Dbxref=Genbank:WP_004191477.1;Name=WP_004191477.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmI;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012433738.1;locus_tag=NIV78_RS07020;product=50S ribosomal protein L35;protein_id=WP_004191477.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1530177 1530536 . + . ID=gene-NIV78_RS07025;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=NIV78_RS07025 NZ_CP100136.1 Protein Homology CDS 1530177 1530536 . + 0 ID=cds-WP_004192938.1;Parent=gene-NIV78_RS07025;Dbxref=Genbank:WP_004192938.1;Name=WP_004192938.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplT;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192938.1;locus_tag=NIV78_RS07025;product=50S ribosomal protein L20;protein_id=WP_004192938.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1530685 1531698 . + . ID=gene-NIV78_RS07030;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=NIV78_RS07030 NZ_CP100136.1 Protein Homology CDS 1530685 1531698 . + 0 ID=cds-WP_015876137.1;Parent=gene-NIV78_RS07030;Dbxref=Genbank:WP_015876137.1;Name=WP_015876137.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheS;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753318.1;locus_tag=NIV78_RS07030;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_015876137.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1531776 1534205 . + . ID=gene-NIV78_RS07035;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=NIV78_RS07035 NZ_CP100136.1 Protein Homology CDS 1531776 1534205 . + 0 ID=cds-WP_017922559.1;Parent=gene-NIV78_RS07035;Dbxref=Genbank:WP_017922559.1;Name=WP_017922559.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheT;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010115709.1;locus_tag=NIV78_RS07035;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_017922559.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1534280 1534681 . + . ID=gene-NIV78_RS07040;Name=NIV78_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07040 NZ_CP100136.1 Protein Homology CDS 1534280 1534681 . + 0 ID=cds-WP_015876135.1;Parent=gene-NIV78_RS07040;Dbxref=Genbank:WP_015876135.1;Name=WP_015876135.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010104148.1;locus_tag=NIV78_RS07040;product=integration host factor subunit alpha;protein_id=WP_015876135.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1534740 1535147 . + . ID=gene-NIV78_RS07045;Name=NIV78_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07045 NZ_CP100136.1 Protein Homology CDS 1534740 1535147 . + 0 ID=cds-WP_017423428.1;Parent=gene-NIV78_RS07045;Dbxref=Genbank:WP_017423428.1;Name=WP_017423428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876134.1;locus_tag=NIV78_RS07045;product=MerR family transcriptional regulator;protein_id=WP_017423428.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1535254 1537419 . - . ID=gene-NIV78_RS07050;Name=NIV78_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07050 NZ_CP100136.1 Protein Homology CDS 1535254 1537419 . - 0 ID=cds-WP_015876133.1;Parent=gene-NIV78_RS07050;Dbxref=Genbank:WP_015876133.1;Name=WP_015876133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722909.1;locus_tag=NIV78_RS07050;product=hypothetical protein;protein_id=WP_015876133.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1537588 1537842 . + . ID=gene-NIV78_RS07055;Name=NIV78_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07055 NZ_CP100136.1 GeneMarkS-2+ CDS 1537588 1537842 . + 0 ID=cds-WP_127913941.1;Parent=gene-NIV78_RS07055;Dbxref=Genbank:WP_127913941.1;Name=WP_127913941.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS07055;product=hypothetical protein;protein_id=WP_127913941.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1537896 1538066 . + . ID=gene-NIV78_RS07060;Name=NIV78_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07060 NZ_CP100136.1 Protein Homology CDS 1537896 1538066 . + 0 ID=cds-WP_015876132.1;Parent=gene-NIV78_RS07060;Dbxref=Genbank:WP_015876132.1;Name=WP_015876132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876132.1;locus_tag=NIV78_RS07060;product=Flp family type IVb pilin;protein_id=WP_015876132.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1538125 1539567 . - . ID=gene-NIV78_RS07065;Name=NIV78_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07065 NZ_CP100136.1 Protein Homology CDS 1538125 1539567 . - 0 ID=cds-WP_015876131.1;Parent=gene-NIV78_RS07065;Dbxref=Genbank:WP_015876131.1;Name=WP_015876131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876131.1;locus_tag=NIV78_RS07065;product=PLP-dependent aminotransferase family protein;protein_id=WP_015876131.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1540013 1541377 . + . ID=gene-NIV78_RS07070;Name=NIV78_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07070 NZ_CP100136.1 Protein Homology CDS 1540013 1541377 . + 0 ID=cds-WP_017922549.1;Parent=gene-NIV78_RS07070;Dbxref=Genbank:WP_017922549.1;Name=WP_017922549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876130.1;locus_tag=NIV78_RS07070;product=lysine 2%2C3-aminomutase;protein_id=WP_017922549.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1541382 1542455 . + . ID=gene-NIV78_RS07075;Name=NIV78_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07075 NZ_CP100136.1 Protein Homology CDS 1541382 1542455 . + 0 ID=cds-WP_015876129.1;Parent=gene-NIV78_RS07075;Dbxref=Genbank:WP_015876129.1;Name=WP_015876129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876129.1;locus_tag=NIV78_RS07075;product=Ldh family oxidoreductase;protein_id=WP_015876129.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1542452 1543357 . + . ID=gene-NIV78_RS07080;Name=NIV78_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07080 NZ_CP100136.1 Protein Homology CDS 1542452 1543357 . + 0 ID=cds-WP_017424688.1;Parent=gene-NIV78_RS07080;Dbxref=Genbank:WP_017424688.1;Name=WP_017424688.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876128.1;locus_tag=NIV78_RS07080;product=branched-chain amino acid aminotransferase;protein_id=WP_017424688.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1543350 1544114 . + . ID=gene-NIV78_RS07085;Name=NIV78_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07085 NZ_CP100136.1 Protein Homology CDS 1543350 1544114 . + 0 ID=cds-WP_015876127.1;Parent=gene-NIV78_RS07085;Dbxref=Genbank:WP_015876127.1;Name=WP_015876127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876127.1;locus_tag=NIV78_RS07085;product=TauD/TfdA family dioxygenase;protein_id=WP_015876127.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1544124 1545059 . + . ID=gene-NIV78_RS07090;Name=NIV78_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07090 NZ_CP100136.1 Protein Homology CDS 1544124 1545059 . + 0 ID=cds-WP_017922550.1;Parent=gene-NIV78_RS07090;Dbxref=Genbank:WP_017922550.1;Name=WP_017922550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876126.1;locus_tag=NIV78_RS07090;product=diiron oxygenase;protein_id=WP_017922550.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1545116 1545961 . + . ID=gene-NIV78_RS07095;Name=NIV78_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07095 NZ_CP100136.1 Protein Homology CDS 1545116 1545961 . + 0 ID=cds-WP_015876125.1;Parent=gene-NIV78_RS07095;Dbxref=Genbank:WP_015876125.1;Name=WP_015876125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876125.1;locus_tag=NIV78_RS07095;product=N-acyl homoserine lactonase family protein;protein_id=WP_015876125.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1545963 1546502 . + . ID=gene-NIV78_RS07100;Name=NIV78_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07100 NZ_CP100136.1 Protein Homology CDS 1545963 1546502 . + 0 ID=cds-WP_017922551.1;Parent=gene-NIV78_RS07100;Dbxref=Genbank:WP_017922551.1;Name=WP_017922551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876124.1;locus_tag=NIV78_RS07100;product=cupin domain-containing protein;protein_id=WP_017922551.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1546499 1547755 . + . ID=gene-NIV78_RS07105;Name=NIV78_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07105 NZ_CP100136.1 Protein Homology CDS 1546499 1547755 . + 0 ID=cds-WP_017922552.1;Parent=gene-NIV78_RS07105;Dbxref=Genbank:WP_017922552.1;Name=WP_017922552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876123.1;locus_tag=NIV78_RS07105;product=MFS transporter;protein_id=WP_017922552.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1547905 1548540 . + . ID=gene-NIV78_RS07110;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=NIV78_RS07110 NZ_CP100136.1 Protein Homology CDS 1547905 1548540 . + 0 ID=cds-WP_017922553.1;Parent=gene-NIV78_RS07110;Dbxref=Genbank:WP_017922553.1;Name=WP_017922553.1;Ontology_term=GO:0006749;gbkey=CDS;gene=yfcF;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876122.1;locus_tag=NIV78_RS07110;product=glutathione transferase;protein_id=WP_017922553.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1548562 1548942 . - . ID=gene-NIV78_RS07115;Name=NIV78_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07115 NZ_CP100136.1 Protein Homology CDS 1548562 1548942 . - 0 ID=cds-WP_017423835.1;Parent=gene-NIV78_RS07115;Dbxref=Genbank:WP_017423835.1;Name=WP_017423835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423835.1;locus_tag=NIV78_RS07115;product=hypothetical protein;protein_id=WP_017423835.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1548939 1549181 . - . ID=gene-NIV78_RS07120;Name=NIV78_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07120 NZ_CP100136.1 GeneMarkS-2+ CDS 1548939 1549181 . - 0 ID=cds-WP_124836406.1;Parent=gene-NIV78_RS07120;Dbxref=Genbank:WP_124836406.1;Name=WP_124836406.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS07120;product=hypothetical protein;protein_id=WP_124836406.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1549245 1549321 . + . ID=gene-NIV78_RS07125;Name=NIV78_RS07125;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS07125 NZ_CP100136.1 tRNAscan-SE tRNA 1549245 1549321 . + . ID=rna-NIV78_RS07125;Parent=gene-NIV78_RS07125;anticodon=(pos:1549279..1549281);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS07125;product=tRNA-Pro NZ_CP100136.1 tRNAscan-SE exon 1549245 1549321 . + . ID=exon-NIV78_RS07125-1;Parent=rna-NIV78_RS07125;anticodon=(pos:1549279..1549281);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS07125;product=tRNA-Pro NZ_CP100136.1 RefSeq gene 1549454 1549999 . + . ID=gene-NIV78_RS07130;Name=NIV78_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07130 NZ_CP100136.1 GeneMarkS-2+ CDS 1549454 1549999 . + 0 ID=cds-WP_251118796.1;Parent=gene-NIV78_RS07130;Dbxref=Genbank:WP_251118796.1;Name=WP_251118796.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS07130;product=hypothetical protein;protein_id=WP_251118796.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1550013 1551140 . - . ID=gene-NIV78_RS07135;Name=NIV78_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07135 NZ_CP100136.1 Protein Homology CDS 1550013 1551140 . - 0 ID=cds-WP_251118797.1;Parent=gene-NIV78_RS07135;Dbxref=Genbank:WP_251118797.1;Name=WP_251118797.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876073.1;locus_tag=NIV78_RS07135;product=tyrosine-type recombinase/integrase;protein_id=WP_251118797.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1551137 1551364 . - . ID=gene-NIV78_RS07140;Name=NIV78_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07140 NZ_CP100136.1 Protein Homology CDS 1551137 1551364 . - 0 ID=cds-WP_251118798.1;Parent=gene-NIV78_RS07140;Dbxref=Genbank:WP_251118798.1;Name=WP_251118798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876074.1;locus_tag=NIV78_RS07140;product=DUF4224 domain-containing protein;protein_id=WP_251118798.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1551361 1551513 . - . ID=gene-NIV78_RS07145;Name=NIV78_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07145 NZ_CP100136.1 GeneMarkS-2+ CDS 1551361 1551513 . - 0 ID=cds-WP_257757333.1;Parent=gene-NIV78_RS07145;Dbxref=Genbank:WP_257757333.1;Name=WP_257757333.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS07145;product=hypothetical protein;protein_id=WP_257757333.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1551510 1551848 . - . ID=gene-NIV78_RS07150;Name=NIV78_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07150 NZ_CP100136.1 GeneMarkS-2+ CDS 1551510 1551848 . - 0 ID=cds-WP_257757334.1;Parent=gene-NIV78_RS07150;Dbxref=Genbank:WP_257757334.1;Name=WP_257757334.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS07150;product=hypothetical protein;protein_id=WP_257757334.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1551845 1552183 . - . ID=gene-NIV78_RS07155;Name=NIV78_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07155 NZ_CP100136.1 GeneMarkS-2+ CDS 1551845 1552183 . - 0 ID=cds-WP_257757335.1;Parent=gene-NIV78_RS07155;Dbxref=Genbank:WP_257757335.1;Name=WP_257757335.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS07155;product=hypothetical protein;protein_id=WP_257757335.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1552180 1552704 . - . ID=gene-NIV78_RS07160;Name=NIV78_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07160 NZ_CP100136.1 GeneMarkS-2+ CDS 1552180 1552704 . - 0 ID=cds-WP_257757336.1;Parent=gene-NIV78_RS07160;Dbxref=Genbank:WP_257757336.1;Name=WP_257757336.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS07160;product=hypothetical protein;protein_id=WP_257757336.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1552701 1552991 . - . ID=gene-NIV78_RS07165;Name=NIV78_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07165 NZ_CP100136.1 Protein Homology CDS 1552701 1552991 . - 0 ID=cds-WP_257757337.1;Parent=gene-NIV78_RS07165;Dbxref=Genbank:WP_257757337.1;Name=WP_257757337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488885.1;locus_tag=NIV78_RS07165;product=hypothetical protein;protein_id=WP_257757337.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1552988 1554994 . - . ID=gene-NIV78_RS07170;Name=NIV78_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07170 NZ_CP100136.1 GeneMarkS-2+ CDS 1552988 1554994 . - 0 ID=cds-WP_257757338.1;Parent=gene-NIV78_RS07170;Dbxref=Genbank:WP_257757338.1;Name=WP_257757338.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS07170;product=hypothetical protein;protein_id=WP_257757338.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1554991 1555356 . - . ID=gene-NIV78_RS07175;Name=NIV78_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07175 NZ_CP100136.1 Protein Homology CDS 1554991 1555356 . - 0 ID=cds-WP_257757339.1;Parent=gene-NIV78_RS07175;Dbxref=Genbank:WP_257757339.1;Name=WP_257757339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010110032.1;locus_tag=NIV78_RS07175;product=hypothetical protein;protein_id=WP_257757339.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1555369 1556388 . - . ID=gene-NIV78_RS07180;Name=NIV78_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07180 NZ_CP100136.1 Protein Homology CDS 1555369 1556388 . - 0 ID=cds-WP_257757395.1;Parent=gene-NIV78_RS07180;Dbxref=Genbank:WP_257757395.1;Name=WP_257757395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018435315.1;locus_tag=NIV78_RS07180;product=site-specific DNA-methyltransferase;protein_id=WP_257757395.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1556589 1556792 . - . ID=gene-NIV78_RS07185;Name=NIV78_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07185 NZ_CP100136.1 GeneMarkS-2+ CDS 1556589 1556792 . - 0 ID=cds-WP_251118806.1;Parent=gene-NIV78_RS07185;Dbxref=Genbank:WP_251118806.1;Name=WP_251118806.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS07185;product=hypothetical protein;protein_id=WP_251118806.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1556800 1557081 . - . ID=gene-NIV78_RS07190;Name=NIV78_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07190 NZ_CP100136.1 GeneMarkS-2+ CDS 1556800 1557081 . - 0 ID=cds-WP_251118807.1;Parent=gene-NIV78_RS07190;Dbxref=Genbank:WP_251118807.1;Name=WP_251118807.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS07190;product=hypothetical protein;protein_id=WP_251118807.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1557112 1557372 . - . ID=gene-NIV78_RS07195;Name=NIV78_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07195 NZ_CP100136.1 GeneMarkS-2+ CDS 1557112 1557372 . - 0 ID=cds-WP_251118808.1;Parent=gene-NIV78_RS07195;Dbxref=Genbank:WP_251118808.1;Name=WP_251118808.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS07195;product=hypothetical protein;protein_id=WP_251118808.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1557608 1557781 . - . ID=gene-NIV78_RS07200;Name=NIV78_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07200 NZ_CP100136.1 GeneMarkS-2+ CDS 1557608 1557781 . - 0 ID=cds-WP_257757342.1;Parent=gene-NIV78_RS07200;Dbxref=Genbank:WP_257757342.1;Name=WP_257757342.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS07200;product=hypothetical protein;protein_id=WP_257757342.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1558177 1558563 . + . ID=gene-NIV78_RS07205;Name=NIV78_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07205 NZ_CP100136.1 GeneMarkS-2+ CDS 1558177 1558563 . + 0 ID=cds-WP_251118811.1;Parent=gene-NIV78_RS07205;Dbxref=Genbank:WP_251118811.1;Name=WP_251118811.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS07205;product=hypothetical protein;protein_id=WP_251118811.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1558986 1559462 . - . ID=gene-NIV78_RS07210;Name=NIV78_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07210 NZ_CP100136.1 Protein Homology CDS 1558986 1559462 . - 0 ID=cds-WP_251118812.1;Parent=gene-NIV78_RS07210;Dbxref=Genbank:WP_251118812.1;Name=WP_251118812.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013540.2;locus_tag=NIV78_RS07210;product=helix-turn-helix domain-containing protein;protein_id=WP_251118812.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1559538 1559798 . + . ID=gene-NIV78_RS07215;Name=NIV78_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07215 NZ_CP100136.1 GeneMarkS-2+ CDS 1559538 1559798 . + 0 ID=cds-WP_257757343.1;Parent=gene-NIV78_RS07215;Dbxref=Genbank:WP_257757343.1;Name=WP_257757343.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS07215;product=helix-turn-helix domain-containing protein;protein_id=WP_257757343.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1559855 1560178 . - . ID=gene-NIV78_RS07220;Name=NIV78_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07220 NZ_CP100136.1 GeneMarkS-2+ CDS 1559855 1560178 . - 0 ID=cds-WP_251118814.1;Parent=gene-NIV78_RS07220;Dbxref=Genbank:WP_251118814.1;Name=WP_251118814.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS07220;product=hypothetical protein;protein_id=WP_251118814.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1560334 1560708 . + . ID=gene-NIV78_RS07225;Name=NIV78_RS07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07225 NZ_CP100136.1 Protein Homology CDS 1560334 1560708 . + 0 ID=cds-WP_251118815.1;Parent=gene-NIV78_RS07225;Dbxref=Genbank:WP_251118815.1;Name=WP_251118815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012401298.1;locus_tag=NIV78_RS07225;product=helix-turn-helix domain-containing protein;protein_id=WP_251118815.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1560705 1560893 . + . ID=gene-NIV78_RS07230;Name=NIV78_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07230 NZ_CP100136.1 GeneMarkS-2+ CDS 1560705 1560893 . + 0 ID=cds-WP_257757344.1;Parent=gene-NIV78_RS07230;Dbxref=Genbank:WP_257757344.1;Name=WP_257757344.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS07230;product=hypothetical protein;protein_id=WP_257757344.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1561164 1561520 . + . ID=gene-NIV78_RS07235;Name=NIV78_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07235 NZ_CP100136.1 Protein Homology CDS 1561164 1561520 . + 0 ID=cds-WP_251118817.1;Parent=gene-NIV78_RS07235;Dbxref=Genbank:WP_251118817.1;Name=WP_251118817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495279.1;locus_tag=NIV78_RS07235;product=hypothetical protein;protein_id=WP_251118817.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1561530 1562378 . + . ID=gene-NIV78_RS07240;Name=NIV78_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07240 NZ_CP100136.1 Protein Homology CDS 1561530 1562378 . + 0 ID=cds-WP_251118818.1;Parent=gene-NIV78_RS07240;Dbxref=Genbank:WP_251118818.1;Name=WP_251118818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330103.1;locus_tag=NIV78_RS07240;product=hypothetical protein;protein_id=WP_251118818.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1562375 1562659 . + . ID=gene-NIV78_RS07245;Name=NIV78_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07245 NZ_CP100136.1 Protein Homology CDS 1562375 1562659 . + 0 ID=cds-WP_257757345.1;Parent=gene-NIV78_RS07245;Dbxref=Genbank:WP_257757345.1;Name=WP_257757345.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025107.2;locus_tag=NIV78_RS07245;product=helix-turn-helix domain-containing protein;protein_id=WP_257757345.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1562726 1563523 . - . ID=gene-NIV78_RS07250;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=NIV78_RS07250 NZ_CP100136.1 Protein Homology CDS 1562726 1563523 . - 0 ID=cds-WP_012732720.1-2;Parent=gene-NIV78_RS07250;Dbxref=Genbank:WP_012732720.1;Name=WP_012732720.1;Ontology_term=GO:0005524;gbkey=CDS;gene=istB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013700154.1;locus_tag=NIV78_RS07250;product=IS21-like element helper ATPase IstB;protein_id=WP_012732720.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1563608 1564474 . - . ID=gene-NIV78_RS07255;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=NIV78_RS07255 NZ_CP100136.1 Protein Homology CDS 1563608 1564474 . - 0 ID=cds-WP_012732871.1-3;Parent=gene-NIV78_RS07255;Dbxref=Genbank:WP_012732871.1;Name=WP_012732871.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476481.1;locus_tag=NIV78_RS07255;product=IS21-like element ISBcen28 family helper ATPase IstB;protein_id=WP_012732871.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1564471 1565727 . - . ID=gene-NIV78_RS07260;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=NIV78_RS07260 NZ_CP100136.1 Protein Homology CDS 1564471 1565727 . - 0 ID=cds-WP_012734039.1-3;Parent=gene-NIV78_RS07260;Dbxref=Genbank:WP_012734039.1;Name=WP_012734039.1;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476480.1;locus_tag=NIV78_RS07260;product=IS21 family transposase;protein_id=WP_012734039.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1565921 1567426 . - . ID=gene-NIV78_RS07265;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=NIV78_RS07265 NZ_CP100136.1 Protein Homology CDS 1565921 1567426 . - 0 ID=cds-WP_012732721.1-2;Parent=gene-NIV78_RS07265;Dbxref=Genbank:WP_012732721.1;Name=WP_012732721.1;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546517.1;locus_tag=NIV78_RS07265;product=IS21 family transposase;protein_id=WP_012732721.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1567510 1568964 . - . ID=gene-NIV78_RS07270;Name=NIV78_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07270 NZ_CP100136.1 Protein Homology CDS 1567510 1568964 . - 0 ID=cds-WP_257757346.1;Parent=gene-NIV78_RS07270;Dbxref=Genbank:WP_257757346.1;Name=WP_257757346.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014380.2;locus_tag=NIV78_RS07270;product=hypothetical protein;protein_id=WP_257757346.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1568961 1569443 . - . ID=gene-NIV78_RS07275;Name=NIV78_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07275 NZ_CP100136.1 Protein Homology CDS 1568961 1569443 . - 0 ID=cds-WP_257757347.1;Parent=gene-NIV78_RS07275;Dbxref=Genbank:WP_257757347.1;Name=WP_257757347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884356.1;locus_tag=NIV78_RS07275;product=hypothetical protein;protein_id=WP_257757347.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1569505 1569843 . - . ID=gene-NIV78_RS07280;Name=NIV78_RS07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07280 NZ_CP100136.1 Protein Homology CDS 1569505 1569843 . - 0 ID=cds-WP_257757348.1;Parent=gene-NIV78_RS07280;Dbxref=Genbank:WP_257757348.1;Name=WP_257757348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884357.1;locus_tag=NIV78_RS07280;product=helix-turn-helix domain-containing protein;protein_id=WP_257757348.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1569988 1570779 . + . ID=gene-NIV78_RS07285;Name=NIV78_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07285 NZ_CP100136.1 Protein Homology CDS 1569988 1570779 . + 0 ID=cds-WP_257757349.1;Parent=gene-NIV78_RS07285;Dbxref=Genbank:WP_257757349.1;Name=WP_257757349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884358.1;locus_tag=NIV78_RS07285;product=phage repressor protein C;protein_id=WP_257757349.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1570794 1571300 . + . ID=gene-NIV78_RS07290;Name=NIV78_RS07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07290 NZ_CP100136.1 GeneMarkS-2+ CDS 1570794 1571300 . + 0 ID=cds-WP_257757351.1;Parent=gene-NIV78_RS07290;Dbxref=Genbank:WP_257757351.1;Name=WP_257757351.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS07290;product=hypothetical protein;protein_id=WP_257757351.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 1571637 1571942 . - . ID=gene-NIV78_RS07295;Name=NIV78_RS07295;end_range=1571942,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS07295;partial=true;pseudo=true NZ_CP100136.1 Protein Homology CDS 1571637 1571942 . - 0 ID=cds-NIV78_RS07295;Parent=gene-NIV78_RS07295;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1571942,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492354.1;locus_tag=NIV78_RS07295;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 1572186 1572557 . + . ID=gene-NIV78_RS07300;Name=NIV78_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07300 NZ_CP100136.1 Protein Homology CDS 1572186 1572557 . + 0 ID=cds-WP_015876011.1;Parent=gene-NIV78_RS07300;Dbxref=Genbank:WP_015876011.1;Name=WP_015876011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876011.1;locus_tag=NIV78_RS07300;product=DUF1493 family protein;protein_id=WP_015876011.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 1572554 1573718 . - . ID=gene-NIV78_RS07305;Name=NIV78_RS07305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS07305;pseudo=true NZ_CP100136.1 Protein Homology CDS 1572554 1573718 . - 0 ID=cds-NIV78_RS07305;Parent=gene-NIV78_RS07305;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558183.1;locus_tag=NIV78_RS07305;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 1573945 1575147 . + . ID=gene-NIV78_RS07310;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=NIV78_RS07310 NZ_CP100136.1 Protein Homology CDS 1573945 1575147 . + 0 ID=cds-WP_015876009.1;Parent=gene-NIV78_RS07310;Dbxref=Genbank:WP_015876009.1;Name=WP_015876009.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004205956.1;locus_tag=NIV78_RS07310;product=outer membrane protein assembly factor BamC;protein_id=WP_015876009.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1575295 1575480 . + . ID=gene-NIV78_RS07315;Name=NIV78_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07315 NZ_CP100136.1 GeneMarkS-2+ CDS 1575295 1575480 . + 0 ID=cds-WP_124836410.1;Parent=gene-NIV78_RS07315;Dbxref=Genbank:WP_124836410.1;Name=WP_124836410.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS07315;product=hypothetical protein;protein_id=WP_124836410.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1575647 1575937 . + . ID=gene-NIV78_RS07320;Name=NIV78_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07320 NZ_CP100136.1 Protein Homology CDS 1575647 1575937 . + 0 ID=cds-WP_015876008.1;Parent=gene-NIV78_RS07320;Dbxref=Genbank:WP_015876008.1;Name=WP_015876008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193694.1;locus_tag=NIV78_RS07320;product=antibiotic biosynthesis monooxygenase;protein_id=WP_015876008.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1575994 1576251 . - . ID=gene-NIV78_RS07325;Name=NIV78_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07325 NZ_CP100136.1 Protein Homology CDS 1575994 1576251 . - 0 ID=cds-WP_015876007.1;Parent=gene-NIV78_RS07325;Dbxref=Genbank:WP_015876007.1;Name=WP_015876007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191628.1;locus_tag=NIV78_RS07325;product=hypothetical protein;protein_id=WP_015876007.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1576408 1576668 . - . ID=gene-NIV78_RS07330;Name=NIV78_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07330 NZ_CP100136.1 Protein Homology CDS 1576408 1576668 . - 0 ID=cds-WP_015876006.1;Parent=gene-NIV78_RS07330;Dbxref=Genbank:WP_015876006.1;Name=WP_015876006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521679.1;locus_tag=NIV78_RS07330;product=hypothetical protein;protein_id=WP_015876006.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1576922 1577638 . - . ID=gene-NIV78_RS07335;Name=NIV78_RS07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07335 NZ_CP100136.1 Protein Homology CDS 1576922 1577638 . - 0 ID=cds-WP_017922555.1;Parent=gene-NIV78_RS07335;Dbxref=Genbank:WP_017922555.1;Name=WP_017922555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526847.1;locus_tag=NIV78_RS07335;product=YdcF family protein;protein_id=WP_017922555.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1577827 1578144 . + . ID=gene-NIV78_RS07340;Name=NIV78_RS07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07340 NZ_CP100136.1 Protein Homology CDS 1577827 1578144 . + 0 ID=cds-WP_015876004.1;Parent=gene-NIV78_RS07340;Dbxref=Genbank:WP_015876004.1;Name=WP_015876004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332596.1;locus_tag=NIV78_RS07340;product=hypothetical protein;protein_id=WP_015876004.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1578309 1578575 . - . ID=gene-NIV78_RS07345;Name=NIV78_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07345 NZ_CP100136.1 Protein Homology CDS 1578309 1578575 . - 0 ID=cds-WP_015876003.1;Parent=gene-NIV78_RS07345;Dbxref=Genbank:WP_015876003.1;Name=WP_015876003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197394.1;locus_tag=NIV78_RS07345;product=hypothetical protein;protein_id=WP_015876003.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1578783 1579184 . - . ID=gene-NIV78_RS07350;Name=NIV78_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07350 NZ_CP100136.1 Protein Homology CDS 1578783 1579184 . - 0 ID=cds-WP_015876002.1;Parent=gene-NIV78_RS07350;Dbxref=Genbank:WP_015876002.1;Name=WP_015876002.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024736.2;locus_tag=NIV78_RS07350;product=transposase;protein_id=WP_015876002.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1579580 1580482 . + . ID=gene-NIV78_RS07355;Name=NIV78_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07355 NZ_CP100136.1 Protein Homology CDS 1579580 1580482 . + 0 ID=cds-WP_015876001.1;Parent=gene-NIV78_RS07355;Dbxref=Genbank:WP_015876001.1;Name=WP_015876001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193481.1;locus_tag=NIV78_RS07355;product=LysR family transcriptional regulator;protein_id=WP_015876001.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1580594 1581793 . + . ID=gene-NIV78_RS07360;Name=NIV78_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07360 NZ_CP100136.1 Protein Homology CDS 1580594 1581793 . + 0 ID=cds-WP_017424987.1;Parent=gene-NIV78_RS07360;Dbxref=Genbank:WP_017424987.1;Name=WP_017424987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876000.1;locus_tag=NIV78_RS07360;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_017424987.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1582080 1583171 . + . ID=gene-NIV78_RS07365;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=NIV78_RS07365 NZ_CP100136.1 Protein Homology CDS 1582080 1583171 . + 0 ID=cds-WP_017922556.1;Parent=gene-NIV78_RS07365;Dbxref=Genbank:WP_017922556.1;Name=WP_017922556.1;Ontology_term=GO:0007059,GO:0005515;gbkey=CDS;gene=scpB;go_function=protein binding|0005515||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851532.1;locus_tag=NIV78_RS07365;product=SMC-Scp complex subunit ScpB;protein_id=WP_017922556.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1583233 1584948 . + . ID=gene-NIV78_RS07370;Name=NIV78_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07370 NZ_CP100136.1 Protein Homology CDS 1583233 1584948 . + 0 ID=cds-WP_124836414.1;Parent=gene-NIV78_RS07370;Dbxref=Genbank:WP_124836414.1;Name=WP_124836414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004548140.1;locus_tag=NIV78_RS07370;product=rRNA pseudouridine synthase;protein_id=WP_124836414.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1585253 1585714 . + . ID=gene-NIV78_RS07375;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=NIV78_RS07375 NZ_CP100136.1 Protein Homology CDS 1585253 1585714 . + 0 ID=cds-WP_015875997.1;Parent=gene-NIV78_RS07375;Dbxref=Genbank:WP_015875997.1;Name=WP_015875997.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012432651.1;locus_tag=NIV78_RS07375;product=ribosome maturation factor RimP;protein_id=WP_015875997.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1585711 1587186 . + . ID=gene-NIV78_RS07380;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=NIV78_RS07380 NZ_CP100136.1 Protein Homology CDS 1585711 1587186 . + 0 ID=cds-WP_015875996.1;Parent=gene-NIV78_RS07380;Dbxref=Genbank:WP_015875996.1;Name=WP_015875996.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012432652.1;locus_tag=NIV78_RS07380;product=transcription termination factor NusA;protein_id=WP_015875996.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1587280 1590246 . + . ID=gene-NIV78_RS07385;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=NIV78_RS07385 NZ_CP100136.1 Protein Homology CDS 1587280 1590246 . + 0 ID=cds-WP_017423930.1;Parent=gene-NIV78_RS07385;Dbxref=Genbank:WP_017423930.1;Name=WP_017423930.1;Ontology_term=GO:0006413,GO:0003743,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402062.1;locus_tag=NIV78_RS07385;product=translation initiation factor IF-2;protein_id=WP_017423930.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1590360 1590728 . + . ID=gene-NIV78_RS07390;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=NIV78_RS07390 NZ_CP100136.1 Protein Homology CDS 1590360 1590728 . + 0 ID=cds-WP_015875994.1;Parent=gene-NIV78_RS07390;Dbxref=Genbank:WP_015875994.1;Name=WP_015875994.1;Ontology_term=GO:0006396,GO:0019843;gbkey=CDS;gene=rbfA;go_function=rRNA binding|0019843||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009891499.1;locus_tag=NIV78_RS07390;product=30S ribosome-binding factor RbfA;protein_id=WP_015875994.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1590765 1591721 . + . ID=gene-NIV78_RS07395;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=NIV78_RS07395 NZ_CP100136.1 Protein Homology CDS 1590765 1591721 . + 0 ID=cds-WP_017924033.1;Parent=gene-NIV78_RS07395;Dbxref=Genbank:WP_017924033.1;Name=WP_017924033.1;Ontology_term=GO:0006400,GO:0004730;gbkey=CDS;gene=truB;go_function=pseudouridylate synthase activity|0004730||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423929.1;locus_tag=NIV78_RS07395;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_017924033.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1591846 1593408 . - . ID=gene-NIV78_RS07400;Name=NIV78_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07400 NZ_CP100136.1 Protein Homology CDS 1591846 1593408 . - 0 ID=cds-WP_015875992.1;Parent=gene-NIV78_RS07400;Dbxref=Genbank:WP_015875992.1;Name=WP_015875992.1;Ontology_term=GO:0006855,GO:0009410,GO:0005887;gbkey=CDS;go_component=integral component of plasma membrane|0005887||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA,response to xenobiotic stimulus|0009410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875992.1;locus_tag=NIV78_RS07400;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_015875992.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1593427 1594644 . - . ID=gene-NIV78_RS07405;Name=NIV78_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07405 NZ_CP100136.1 Protein Homology CDS 1593427 1594644 . - 0 ID=cds-WP_017922895.1;Parent=gene-NIV78_RS07405;Dbxref=Genbank:WP_017922895.1;Name=WP_017922895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875991.1;locus_tag=NIV78_RS07405;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WP_017922895.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1594712 1596211 . - . ID=gene-NIV78_RS07410;Name=NIV78_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07410 NZ_CP100136.1 Protein Homology CDS 1594712 1596211 . - 0 ID=cds-WP_026051503.1;Parent=gene-NIV78_RS07410;Dbxref=Genbank:WP_026051503.1;Name=WP_026051503.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423927.1;locus_tag=NIV78_RS07410;product=efflux transporter outer membrane subunit;protein_id=WP_026051503.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1596294 1596803 . - . ID=gene-NIV78_RS07415;Name=NIV78_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07415 NZ_CP100136.1 Protein Homology CDS 1596294 1596803 . - 0 ID=cds-WP_015875989.1;Parent=gene-NIV78_RS07415;Dbxref=Genbank:WP_015875989.1;Name=WP_015875989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875989.1;locus_tag=NIV78_RS07415;product=MarR family transcriptional regulator;protein_id=WP_015875989.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1597195 1599015 . + . ID=gene-NIV78_RS07420;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=NIV78_RS07420 NZ_CP100136.1 Protein Homology CDS 1597195 1599015 . + 0 ID=cds-WP_017423926.1;Parent=gene-NIV78_RS07420;Dbxref=Genbank:WP_017423926.1;Name=WP_017423926.1;Ontology_term=GO:0006412,GO:0006950,GO:0005525;gbkey=CDS;gene=typA;go_function=GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875988.1;locus_tag=NIV78_RS07420;product=translational GTPase TypA;protein_id=WP_017423926.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1599033 1599221 . + . ID=gene-NIV78_RS07425;Name=NIV78_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07425 NZ_CP100136.1 GeneMarkS-2+ CDS 1599033 1599221 . + 0 ID=cds-WP_127913947.1;Parent=gene-NIV78_RS07425;Dbxref=Genbank:WP_127913947.1;Name=WP_127913947.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS07425;product=hypothetical protein;protein_id=WP_127913947.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1599334 1602201 . + . ID=gene-NIV78_RS07430;Name=NIV78_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07430 NZ_CP100136.1 Protein Homology CDS 1599334 1602201 . + 0 ID=cds-WP_015875987.1;Parent=gene-NIV78_RS07430;Dbxref=Genbank:WP_015875987.1;Name=WP_015875987.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976;gbkey=CDS;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526855.1;locus_tag=NIV78_RS07430;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_015875987.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1602325 1603596 . + . ID=gene-NIV78_RS07435;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=NIV78_RS07435 NZ_CP100136.1 Protein Homology CDS 1602325 1603596 . + 0 ID=cds-WP_015875986.1;Parent=gene-NIV78_RS07435;Dbxref=Genbank:WP_015875986.1;Name=WP_015875986.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601426.1;locus_tag=NIV78_RS07435;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_015875986.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1603685 1605115 . + . ID=gene-NIV78_RS07440;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=NIV78_RS07440 NZ_CP100136.1 Protein Homology CDS 1603685 1605115 . + 0 ID=cds-WP_015875985.1;Parent=gene-NIV78_RS07440;Dbxref=Genbank:WP_015875985.1;Name=WP_015875985.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884605.1;locus_tag=NIV78_RS07440;product=dihydrolipoyl dehydrogenase;protein_id=WP_015875985.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1605233 1606330 . + . ID=gene-NIV78_RS07445;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=NIV78_RS07445 NZ_CP100136.1 Protein Homology CDS 1605233 1606330 . + 0 ID=cds-WP_026051502.1;Parent=gene-NIV78_RS07445;Dbxref=Genbank:WP_026051502.1;Name=WP_026051502.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011402415.1;locus_tag=NIV78_RS07445;product=cell division protein ZapE;protein_id=WP_026051502.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1606514 1606957 . + . ID=gene-NIV78_RS07450;Name=NIV78_RS07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07450 NZ_CP100136.1 Protein Homology CDS 1606514 1606957 . + 0 ID=cds-WP_017432937.1;Parent=gene-NIV78_RS07450;Dbxref=Genbank:WP_017432937.1;Name=WP_017432937.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024736.2;locus_tag=NIV78_RS07450;product=transposase;protein_id=WP_017432937.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1607060 1607467 . - . ID=gene-NIV78_RS07455;Name=NIV78_RS07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07455 NZ_CP100136.1 Protein Homology CDS 1607060 1607467 . - 0 ID=cds-WP_230674444.1;Parent=gene-NIV78_RS07455;Dbxref=Genbank:WP_230674444.1;Name=WP_230674444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010092525.1;locus_tag=NIV78_RS07455;product=DUF2147 domain-containing protein;protein_id=WP_230674444.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1607661 1609343 . - . ID=gene-NIV78_RS07460;Name=NIV78_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07460 NZ_CP100136.1 Protein Homology CDS 1607661 1609343 . - 0 ID=cds-WP_017923223.1;Parent=gene-NIV78_RS07460;Dbxref=Genbank:WP_017923223.1;Name=WP_017923223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363752.1;locus_tag=NIV78_RS07460;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_017923223.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1609479 1610849 . - . ID=gene-NIV78_RS07465;Name=NIV78_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07465 NZ_CP100136.1 Protein Homology CDS 1609479 1610849 . - 0 ID=cds-WP_017923222.1;Parent=gene-NIV78_RS07465;Dbxref=Genbank:WP_017923222.1;Name=WP_017923222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697793.1;locus_tag=NIV78_RS07465;product=collagen-like triple helix repeat-containing protein;protein_id=WP_017923222.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1610897 1612723 . - . ID=gene-NIV78_RS07470;Name=NIV78_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07470 NZ_CP100136.1 Protein Homology CDS 1610897 1612723 . - 0 ID=cds-WP_251107520.1;Parent=gene-NIV78_RS07470;Dbxref=Genbank:WP_251107520.1;Name=WP_251107520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875979.1;locus_tag=NIV78_RS07470;product=collagen-like triple helix repeat-containing protein;protein_id=WP_251107520.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1613377 1613574 . + . ID=gene-NIV78_RS07475;Name=NIV78_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07475 NZ_CP100136.1 Protein Homology CDS 1613377 1613574 . + 0 ID=cds-WP_015875977.1;Parent=gene-NIV78_RS07475;Dbxref=Genbank:WP_015875977.1;Name=WP_015875977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875977.1;locus_tag=NIV78_RS07475;product=Flp family type IVb pilin;protein_id=WP_015875977.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1613658 1614158 . + . ID=gene-NIV78_RS07480;Name=NIV78_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07480 NZ_CP100136.1 Protein Homology CDS 1613658 1614158 . + 0 ID=cds-WP_017923896.1;Parent=gene-NIV78_RS07480;Dbxref=Genbank:WP_017923896.1;Name=WP_017923896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851538.1;locus_tag=NIV78_RS07480;product=A24 family peptidase;protein_id=WP_017923896.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1614155 1614625 . + . ID=gene-NIV78_RS07485;Name=NIV78_RS07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07485 NZ_CP100136.1 Protein Homology CDS 1614155 1614625 . + 0 ID=cds-WP_015875975.1;Parent=gene-NIV78_RS07485;Dbxref=Genbank:WP_015875975.1;Name=WP_015875975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875975.1;locus_tag=NIV78_RS07485;product=pilus assembly protein;protein_id=WP_015875975.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1614798 1615724 . + . ID=gene-NIV78_RS07490;Name=cpaB;gbkey=Gene;gene=cpaB;gene_biotype=protein_coding;locus_tag=NIV78_RS07490 NZ_CP100136.1 Protein Homology CDS 1614798 1615724 . + 0 ID=cds-WP_161520788.1;Parent=gene-NIV78_RS07490;Dbxref=Genbank:WP_161520788.1;Name=WP_161520788.1;gbkey=CDS;gene=cpaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004538338.1;locus_tag=NIV78_RS07490;product=Flp pilus assembly protein CpaB;protein_id=WP_161520788.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1615796 1617226 . + . ID=gene-NIV78_RS07495;Name=NIV78_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07495 NZ_CP100136.1 Protein Homology CDS 1615796 1617226 . + 0 ID=cds-WP_251107519.1;Parent=gene-NIV78_RS07495;Dbxref=Genbank:WP_251107519.1;Name=WP_251107519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009891455.1;locus_tag=NIV78_RS07495;product=pilus assembly protein N-terminal domain-containing protein;protein_id=WP_251107519.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1617302 1618549 . + . ID=gene-NIV78_RS07500;Name=NIV78_RS07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07500 NZ_CP100136.1 Protein Homology CDS 1617302 1618549 . + 0 ID=cds-WP_015875972.1;Parent=gene-NIV78_RS07500;Dbxref=Genbank:WP_015875972.1;Name=WP_015875972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009891453.1;locus_tag=NIV78_RS07500;product=fimbrial protein;protein_id=WP_015875972.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1618553 1619899 . + . ID=gene-NIV78_RS07505;Name=NIV78_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07505 NZ_CP100136.1 Protein Homology CDS 1618553 1619899 . + 0 ID=cds-WP_017924622.1;Parent=gene-NIV78_RS07505;Dbxref=Genbank:WP_017924622.1;Name=WP_017924622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213456.1;locus_tag=NIV78_RS07505;product=CpaF family protein;protein_id=WP_017924622.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1619892 1620908 . + . ID=gene-NIV78_RS07510;Name=NIV78_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07510 NZ_CP100136.1 Protein Homology CDS 1619892 1620908 . + 0 ID=cds-WP_100555957.1;Parent=gene-NIV78_RS07510;Dbxref=Genbank:WP_100555957.1;Name=WP_100555957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526866.1;locus_tag=NIV78_RS07510;product=type II secretion system F family protein;protein_id=WP_100555957.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1620918 1621910 . + . ID=gene-NIV78_RS07515;Name=NIV78_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07515 NZ_CP100136.1 Protein Homology CDS 1620918 1621910 . + 0 ID=cds-WP_161520791.1;Parent=gene-NIV78_RS07515;Dbxref=Genbank:WP_161520791.1;Name=WP_161520791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495328.1;locus_tag=NIV78_RS07515;product=type II secretion system F family protein;protein_id=WP_161520791.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1621945 1622799 . + . ID=gene-NIV78_RS07520;Name=NIV78_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07520 NZ_CP100136.1 Protein Homology CDS 1621945 1622799 . + 0 ID=cds-WP_017924509.1;Parent=gene-NIV78_RS07520;Dbxref=Genbank:WP_017924509.1;Name=WP_017924509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697804.1;locus_tag=NIV78_RS07520;product=tetratricopeptide repeat protein;protein_id=WP_017924509.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1622820 1623326 . + . ID=gene-NIV78_RS07525;Name=NIV78_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07525 NZ_CP100136.1 Protein Homology CDS 1622820 1623326 . + 0 ID=cds-WP_015875967.1;Parent=gene-NIV78_RS07525;Dbxref=Genbank:WP_015875967.1;Name=WP_015875967.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023687.2;locus_tag=NIV78_RS07525;product=DUF3613 domain-containing protein;protein_id=WP_015875967.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1623341 1625203 . + . ID=gene-NIV78_RS07530;Name=NIV78_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07530 NZ_CP100136.1 Protein Homology CDS 1623341 1625203 . + 0 ID=cds-WP_015875966.1;Parent=gene-NIV78_RS07530;Dbxref=Genbank:WP_015875966.1;Name=WP_015875966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875966.1;locus_tag=NIV78_RS07530;product=pilus assembly protein TadG-related protein;protein_id=WP_015875966.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1625223 1626614 . + . ID=gene-NIV78_RS07535;Name=NIV78_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07535 NZ_CP100136.1 Protein Homology CDS 1625223 1626614 . + 0 ID=cds-WP_015875965.1;Parent=gene-NIV78_RS07535;Dbxref=Genbank:WP_015875965.1;Name=WP_015875965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026562.1;locus_tag=NIV78_RS07535;product=sigma-54 dependent transcriptional regulator;protein_id=WP_015875965.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1626668 1627387 . + . ID=gene-NIV78_RS07540;Name=NIV78_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07540 NZ_CP100136.1 Protein Homology CDS 1626668 1627387 . + 0 ID=cds-WP_169511798.1;Parent=gene-NIV78_RS07540;Dbxref=Genbank:WP_169511798.1;Name=WP_169511798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011402406.1;locus_tag=NIV78_RS07540;product=DUF2968 domain-containing protein;protein_id=WP_169511798.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1627556 1628119 . - . ID=gene-NIV78_RS07545;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=NIV78_RS07545 NZ_CP100136.1 Protein Homology CDS 1627556 1628119 . - 0 ID=cds-WP_251107518.1;Parent=gene-NIV78_RS07545;Dbxref=Genbank:WP_251107518.1;Name=WP_251107518.1;Ontology_term=GO:0006378,GO:0016070,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=mRNA polyadenylation|0006378||IEA,RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875963.1;locus_tag=NIV78_RS07545;product=RNA chaperone Hfq;protein_id=WP_251107518.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1628446 1629378 . - . ID=gene-NIV78_RS07550;Name=NIV78_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07550 NZ_CP100136.1 Protein Homology CDS 1628446 1629378 . - 0 ID=cds-WP_230674394.1;Parent=gene-NIV78_RS07550;Dbxref=Genbank:WP_230674394.1;Name=WP_230674394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602369.1;locus_tag=NIV78_RS07550;product=DUF1571 domain-containing protein;protein_id=WP_230674394.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1629411 1631165 . - . ID=gene-NIV78_RS07555;Name=NIV78_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07555 NZ_CP100136.1 Protein Homology CDS 1629411 1631165 . - 0 ID=cds-WP_015875961.1;Parent=gene-NIV78_RS07555;Dbxref=Genbank:WP_015875961.1;Name=WP_015875961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875961.1;locus_tag=NIV78_RS07555;product=AMP-binding protein;protein_id=WP_015875961.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1631347 1632144 . - . ID=gene-NIV78_RS07560;Name=NIV78_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07560 NZ_CP100136.1 Protein Homology CDS 1631347 1632144 . - 0 ID=cds-WP_015875960.1;Parent=gene-NIV78_RS07560;Dbxref=Genbank:WP_015875960.1;Name=WP_015875960.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697812.1;locus_tag=NIV78_RS07560;product=TetR family transcriptional regulator;protein_id=WP_015875960.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1632354 1633580 . - . ID=gene-NIV78_RS07565;Name=NIV78_RS07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07565 NZ_CP100136.1 Protein Homology CDS 1632354 1633580 . - 0 ID=cds-WP_017922837.1;Parent=gene-NIV78_RS07565;Dbxref=Genbank:WP_017922837.1;Name=WP_017922837.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875959.1;locus_tag=NIV78_RS07565;product=MFS transporter;protein_id=WP_017922837.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1633937 1634563 . + . ID=gene-NIV78_RS07570;Name=NIV78_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07570 NZ_CP100136.1 Protein Homology CDS 1633937 1634563 . + 0 ID=cds-WP_043225298.1;Parent=gene-NIV78_RS07570;Dbxref=Genbank:WP_043225298.1;Name=WP_043225298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416550.1;locus_tag=NIV78_RS07570;product=chromosome partitioning protein ParB;protein_id=WP_043225298.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1634565 1636286 . + . ID=gene-NIV78_RS07575;Name=NIV78_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07575 NZ_CP100136.1 Protein Homology CDS 1634565 1636286 . + 0 ID=cds-WP_015875957.1;Parent=gene-NIV78_RS07575;Dbxref=Genbank:WP_015875957.1;Name=WP_015875957.1;Ontology_term=GO:0008272,GO:0015116,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875957.1;locus_tag=NIV78_RS07575;product=SulP family inorganic anion transporter;protein_id=WP_015875957.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1636401 1636487 . - . ID=gene-NIV78_RS07580;Name=NIV78_RS07580;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS07580 NZ_CP100136.1 tRNAscan-SE tRNA 1636401 1636487 . - . ID=rna-NIV78_RS07580;Parent=gene-NIV78_RS07580;anticodon=(pos:complement(1636451..1636453));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS07580;product=tRNA-Leu NZ_CP100136.1 tRNAscan-SE exon 1636401 1636487 . - . ID=exon-NIV78_RS07580-1;Parent=rna-NIV78_RS07580;anticodon=(pos:complement(1636451..1636453));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS07580;product=tRNA-Leu NZ_CP100136.1 RefSeq gene 1636640 1636726 . - . ID=gene-NIV78_RS07585;Name=NIV78_RS07585;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS07585 NZ_CP100136.1 tRNAscan-SE tRNA 1636640 1636726 . - . ID=rna-NIV78_RS07585;Parent=gene-NIV78_RS07585;anticodon=(pos:complement(1636690..1636692));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS07585;product=tRNA-Leu NZ_CP100136.1 tRNAscan-SE exon 1636640 1636726 . - . ID=exon-NIV78_RS07585-1;Parent=rna-NIV78_RS07585;anticodon=(pos:complement(1636690..1636692));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS07585;product=tRNA-Leu NZ_CP100136.1 RefSeq gene 1637125 1638180 . + . ID=gene-NIV78_RS07590;Name=NIV78_RS07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07590 NZ_CP100136.1 Protein Homology CDS 1637125 1638180 . + 0 ID=cds-WP_043225295.1;Parent=gene-NIV78_RS07590;Dbxref=Genbank:WP_043225295.1;Name=WP_043225295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875956.1;locus_tag=NIV78_RS07590;product=nitronate monooxygenase;protein_id=WP_043225295.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1638315 1638401 . - . ID=gene-NIV78_RS07595;Name=NIV78_RS07595;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS07595 NZ_CP100136.1 tRNAscan-SE tRNA 1638315 1638401 . - . ID=rna-NIV78_RS07595;Parent=gene-NIV78_RS07595;anticodon=(pos:complement(1638365..1638367));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS07595;product=tRNA-Leu NZ_CP100136.1 tRNAscan-SE exon 1638315 1638401 . - . ID=exon-NIV78_RS07595-1;Parent=rna-NIV78_RS07595;anticodon=(pos:complement(1638365..1638367));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS07595;product=tRNA-Leu NZ_CP100136.1 RefSeq gene 1638617 1641082 . + . ID=gene-NIV78_RS07600;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=NIV78_RS07600 NZ_CP100136.1 Protein Homology CDS 1638617 1641082 . + 0 ID=cds-WP_017922840.1;Parent=gene-NIV78_RS07600;Dbxref=Genbank:WP_017922840.1;Name=WP_017922840.1;Ontology_term=GO:0006401,GO:0008997;gbkey=CDS;gene=rnr;go_function=ribonuclease R activity|0008997||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404898.1;locus_tag=NIV78_RS07600;product=ribonuclease R;protein_id=WP_017922840.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1641238 1641990 . + . ID=gene-NIV78_RS07605;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=NIV78_RS07605 NZ_CP100136.1 Protein Homology CDS 1641238 1641990 . + 0 ID=cds-WP_015875954.1;Parent=gene-NIV78_RS07605;Dbxref=Genbank:WP_015875954.1;Name=WP_015875954.1;Ontology_term=GO:0009451,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875954.1;locus_tag=NIV78_RS07605;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_015875954.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1642052 1642984 . + . ID=gene-NIV78_RS07610;Name=NIV78_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07610 NZ_CP100136.1 Protein Homology CDS 1642052 1642984 . + 0 ID=cds-WP_232734536.1;Parent=gene-NIV78_RS07610;Dbxref=Genbank:WP_232734536.1;Name=WP_232734536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875953.1;locus_tag=NIV78_RS07610;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_232734536.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1643201 1643896 . + . ID=gene-NIV78_RS07615;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=NIV78_RS07615 NZ_CP100136.1 Protein Homology CDS 1643201 1643896 . + 0 ID=cds-WP_017924031.1;Parent=gene-NIV78_RS07615;Dbxref=Genbank:WP_017924031.1;Name=WP_017924031.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875952.1;locus_tag=NIV78_RS07615;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_017924031.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1644232 1644969 . + . ID=gene-NIV78_RS07620;Name=NIV78_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07620 NZ_CP100136.1 Protein Homology CDS 1644232 1644969 . + 0 ID=cds-WP_015875951.1;Parent=gene-NIV78_RS07620;Dbxref=Genbank:WP_015875951.1;Name=WP_015875951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875951.1;locus_tag=NIV78_RS07620;product=FCD domain-containing protein;protein_id=WP_015875951.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1645094 1646095 . + . ID=gene-NIV78_RS07625;Name=NIV78_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07625 NZ_CP100136.1 Protein Homology CDS 1645094 1646095 . + 0 ID=cds-WP_017924030.1;Parent=gene-NIV78_RS07625;Dbxref=Genbank:WP_017924030.1;Name=WP_017924030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875950.1;locus_tag=NIV78_RS07625;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_017924030.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1646195 1646854 . - . ID=gene-NIV78_RS07630;Name=NIV78_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07630 NZ_CP100136.1 Protein Homology CDS 1646195 1646854 . - 0 ID=cds-WP_017424911.1;Parent=gene-NIV78_RS07630;Dbxref=Genbank:WP_017424911.1;Name=WP_017424911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521640.1;locus_tag=NIV78_RS07630;product=amino acid ABC transporter permease;protein_id=WP_017424911.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1646969 1647763 . - . ID=gene-NIV78_RS07635;Name=NIV78_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07635 NZ_CP100136.1 Protein Homology CDS 1646969 1647763 . - 0 ID=cds-WP_017924184.1;Parent=gene-NIV78_RS07635;Dbxref=Genbank:WP_017924184.1;Name=WP_017924184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884668.1;locus_tag=NIV78_RS07635;product=cystine ABC transporter substrate-binding protein;protein_id=WP_017924184.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1647871 1648899 . - . ID=gene-NIV78_RS07640;Name=NIV78_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07640 NZ_CP100136.1 Protein Homology CDS 1647871 1648899 . - 0 ID=cds-WP_015875947.1;Parent=gene-NIV78_RS07640;Dbxref=Genbank:WP_015875947.1;Name=WP_015875947.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875947.1;locus_tag=NIV78_RS07640;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_015875947.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1648975 1649814 . - . ID=gene-NIV78_RS07645;Name=NIV78_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07645 NZ_CP100136.1 Protein Homology CDS 1648975 1649814 . - 0 ID=cds-WP_015875946.1;Parent=gene-NIV78_RS07645;Dbxref=Genbank:WP_015875946.1;Name=WP_015875946.1;Ontology_term=GO:0016598,GO:0004057;gbkey=CDS;go_function=arginyltransferase activity|0004057||IEA;go_process=protein arginylation|0016598||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010103948.1;locus_tag=NIV78_RS07645;product=arginyltransferase;protein_id=WP_015875946.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1650240 1650983 . - . ID=gene-NIV78_RS07650;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=NIV78_RS07650 NZ_CP100136.1 Protein Homology CDS 1650240 1650983 . - 0 ID=cds-WP_015875945.1;Parent=gene-NIV78_RS07650;Dbxref=Genbank:WP_015875945.1;Name=WP_015875945.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyltransferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875945.1;locus_tag=NIV78_RS07650;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_015875945.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1650998 1651543 . - . ID=gene-NIV78_RS07655;Name=NIV78_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07655 NZ_CP100136.1 Protein Homology CDS 1650998 1651543 . - 0 ID=cds-WP_015875944.1;Parent=gene-NIV78_RS07655;Dbxref=Genbank:WP_015875944.1;Name=WP_015875944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897161.1;locus_tag=NIV78_RS07655;product=NUDIX hydrolase;protein_id=WP_015875944.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1651848 1652288 . + . ID=gene-NIV78_RS07660;Name=NIV78_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07660 NZ_CP100136.1 Protein Homology CDS 1651848 1652288 . + 0 ID=cds-WP_017922707.1;Parent=gene-NIV78_RS07660;Dbxref=Genbank:WP_017922707.1;Name=WP_017922707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875943.1;locus_tag=NIV78_RS07660;product=hypothetical protein;protein_id=WP_017922707.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1652288 1652629 . + . ID=gene-NIV78_RS07665;Name=NIV78_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07665 NZ_CP100136.1 Protein Homology CDS 1652288 1652629 . + 0 ID=cds-WP_015875942.1;Parent=gene-NIV78_RS07665;Dbxref=Genbank:WP_015875942.1;Name=WP_015875942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875942.1;locus_tag=NIV78_RS07665;product=DUF1493 family protein;protein_id=WP_015875942.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1653640 1654014 . - . ID=gene-NIV78_RS07670;Name=NIV78_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07670 NZ_CP100136.1 GeneMarkS-2+ CDS 1653640 1654014 . - 0 ID=cds-WP_015875941.1;Parent=gene-NIV78_RS07670;Dbxref=Genbank:WP_015875941.1;Name=WP_015875941.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS07670;product=hypothetical protein;protein_id=WP_015875941.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1654117 1654416 . - . ID=gene-NIV78_RS07675;Name=NIV78_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07675 NZ_CP100136.1 GeneMarkS-2+ CDS 1654117 1654416 . - 0 ID=cds-WP_043225151.1;Parent=gene-NIV78_RS07675;Dbxref=Genbank:WP_043225151.1;Name=WP_043225151.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS07675;product=hypothetical protein;protein_id=WP_043225151.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1654435 1655130 . - . ID=gene-NIV78_RS07680;Name=NIV78_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07680 NZ_CP100136.1 GeneMarkS-2+ CDS 1654435 1655130 . - 0 ID=cds-WP_157384090.1;Parent=gene-NIV78_RS07680;Dbxref=Genbank:WP_157384090.1;Name=WP_157384090.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS07680;product=hypothetical protein;protein_id=WP_157384090.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1655172 1655606 . - . ID=gene-NIV78_RS07685;Name=NIV78_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07685 NZ_CP100136.1 GeneMarkS-2+ CDS 1655172 1655606 . - 0 ID=cds-WP_157384091.1;Parent=gene-NIV78_RS07685;Dbxref=Genbank:WP_157384091.1;Name=WP_157384091.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS07685;product=hypothetical protein;protein_id=WP_157384091.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1655687 1655763 . - . ID=gene-NIV78_RS07690;Name=NIV78_RS07690;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS07690 NZ_CP100136.1 tRNAscan-SE tRNA 1655687 1655763 . - . ID=rna-NIV78_RS07690;Parent=gene-NIV78_RS07690;anticodon=(pos:complement(1655727..1655729));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS07690;product=tRNA-Met NZ_CP100136.1 tRNAscan-SE exon 1655687 1655763 . - . ID=exon-NIV78_RS07690-1;Parent=rna-NIV78_RS07690;anticodon=(pos:complement(1655727..1655729));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS07690;product=tRNA-Met NZ_CP100136.1 RefSeq gene 1655934 1656425 . + . ID=gene-NIV78_RS07695;Name=NIV78_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07695 NZ_CP100136.1 Protein Homology CDS 1655934 1656425 . + 0 ID=cds-WP_017924115.1;Parent=gene-NIV78_RS07695;Dbxref=Genbank:WP_017924115.1;Name=WP_017924115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697835.1;locus_tag=NIV78_RS07695;product=heme-binding protein;protein_id=WP_017924115.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1656422 1656760 . + . ID=gene-NIV78_RS07700;Name=NIV78_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07700 NZ_CP100136.1 Protein Homology CDS 1656422 1656760 . + 0 ID=cds-WP_015875939.1;Parent=gene-NIV78_RS07700;Dbxref=Genbank:WP_015875939.1;Name=WP_015875939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009891379.1;locus_tag=NIV78_RS07700;product=multidrug efflux SMR transporter;protein_id=WP_015875939.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1656826 1657254 . - . ID=gene-NIV78_RS07705;Name=NIV78_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07705 NZ_CP100136.1 Protein Homology CDS 1656826 1657254 . - 0 ID=cds-WP_017433726.1;Parent=gene-NIV78_RS07705;Dbxref=Genbank:WP_017433726.1;Name=WP_017433726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332485.1;locus_tag=NIV78_RS07705;product=hypothetical protein;protein_id=WP_017433726.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1657618 1658778 . + . ID=gene-NIV78_RS07710;Name=ssuD;gbkey=Gene;gene=ssuD;gene_biotype=protein_coding;locus_tag=NIV78_RS07710 NZ_CP100136.1 Protein Homology CDS 1657618 1658778 . + 0 ID=cds-WP_015875937.1;Parent=gene-NIV78_RS07710;Dbxref=Genbank:WP_015875937.1;Name=WP_015875937.1;Ontology_term=GO:0006790,GO:0008726,GO:0010181;gbkey=CDS;gene=ssuD;go_function=alkanesulfonate monooxygenase activity|0008726||IEA,FMN binding|0010181||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722969.1;locus_tag=NIV78_RS07710;product=FMNH2-dependent alkanesulfonate monooxygenase;protein_id=WP_015875937.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1658793 1659629 . + . ID=gene-NIV78_RS07715;Name=ssuC;gbkey=Gene;gene=ssuC;gene_biotype=protein_coding;locus_tag=NIV78_RS07715 NZ_CP100136.1 Protein Homology CDS 1658793 1659629 . + 0 ID=cds-WP_015875936.1;Parent=gene-NIV78_RS07715;Dbxref=Genbank:WP_015875936.1;Name=WP_015875936.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=ssuC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011827717.1;locus_tag=NIV78_RS07715;product=aliphatic sulfonate ABC transporter permease SsuC;protein_id=WP_015875936.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1659626 1660597 . + . ID=gene-NIV78_RS07720;Name=NIV78_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07720 NZ_CP100136.1 Protein Homology CDS 1659626 1660597 . + 0 ID=cds-WP_017424702.1;Parent=gene-NIV78_RS07720;Dbxref=Genbank:WP_017424702.1;Name=WP_017424702.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424702.1;locus_tag=NIV78_RS07720;product=ATP-binding cassette domain-containing protein;protein_id=WP_017424702.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1660641 1660856 . + . ID=gene-NIV78_RS07725;Name=NIV78_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07725 NZ_CP100136.1 Protein Homology CDS 1660641 1660856 . + 0 ID=cds-WP_013697841.1;Parent=gene-NIV78_RS07725;Dbxref=Genbank:WP_013697841.1;Name=WP_013697841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007588023.1;locus_tag=NIV78_RS07725;product=molybdopterin-binding protein;protein_id=WP_013697841.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1660986 1661183 . + . ID=gene-NIV78_RS07730;Name=NIV78_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07730 NZ_CP100136.1 Protein Homology CDS 1660986 1661183 . + 0 ID=cds-WP_015875934.1;Parent=gene-NIV78_RS07730;Dbxref=Genbank:WP_015875934.1;Name=WP_015875934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010110042.1;locus_tag=NIV78_RS07730;product=hypothetical protein;protein_id=WP_015875934.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1661219 1661473 . + . ID=gene-NIV78_RS07735;Name=NIV78_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07735 NZ_CP100136.1 Protein Homology CDS 1661219 1661473 . + 0 ID=cds-WP_015875933.1;Parent=gene-NIV78_RS07735;Dbxref=Genbank:WP_015875933.1;Name=WP_015875933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875933.1;locus_tag=NIV78_RS07735;product=hypothetical protein;protein_id=WP_015875933.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 1661655 1662047 . - . ID=gene-NIV78_RS07740;Name=NIV78_RS07740;end_range=1662047,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS07740;partial=true;pseudo=true;start_range=.,1661655 NZ_CP100136.1 Protein Homology CDS 1661655 1662047 . - 0 ID=cds-NIV78_RS07740;Parent=gene-NIV78_RS07740;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1662047,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006492556.1;locus_tag=NIV78_RS07740;partial=true;product=transposase;pseudo=true;start_range=.,1661655;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 1662705 1662911 . - . ID=gene-NIV78_RS07745;Name=NIV78_RS07745;end_range=1662911,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS07745;partial=true;pseudo=true NZ_CP100136.1 Protein Homology CDS 1662705 1662911 . - 0 ID=cds-NIV78_RS07745;Parent=gene-NIV78_RS07745;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1662911,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691449.1;locus_tag=NIV78_RS07745;partial=true;product=winged helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 1663028 1664074 . + . ID=gene-NIV78_RS07750;Name=NIV78_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07750 NZ_CP100136.1 Protein Homology CDS 1663028 1664074 . + 0 ID=cds-WP_257757132.1-4;Parent=gene-NIV78_RS07750;Dbxref=Genbank:WP_257757132.1;Name=WP_257757132.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734099.1;locus_tag=NIV78_RS07750;product=IS481 family transposase;protein_id=WP_257757132.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 1664128 1664328 . - . ID=gene-NIV78_RS07755;Name=NIV78_RS07755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS07755;partial=true;pseudo=true;start_range=.,1664128 NZ_CP100136.1 Protein Homology CDS 1664128 1664328 . - 0 ID=cds-NIV78_RS07755;Parent=gene-NIV78_RS07755;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013593201.1;locus_tag=NIV78_RS07755;partial=true;product=helix-turn-helix transcriptional regulator;pseudo=true;start_range=.,1664128;transl_table=11 NZ_CP100136.1 RefSeq gene 1664361 1665166 . - . ID=gene-NIV78_RS07760;Name=NIV78_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07760 NZ_CP100136.1 Protein Homology CDS 1664836 1665166 . - 0 ID=cds-WP_257757357.1;Parent=gene-NIV78_RS07760;Dbxref=Genbank:WP_257757357.1;Name=WP_257757357.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611183.1;locus_tag=NIV78_RS07760;product=IS5 family transposase;protein_id=WP_257757357.1;transl_table=11 NZ_CP100136.1 Protein Homology CDS 1664361 1664836 . - 2 ID=cds-WP_257757357.1;Parent=gene-NIV78_RS07760;Dbxref=Genbank:WP_257757357.1;Name=WP_257757357.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611183.1;locus_tag=NIV78_RS07760;product=IS5 family transposase;protein_id=WP_257757357.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1665339 1665956 . + . ID=gene-NIV78_RS07765;Name=NIV78_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07765 NZ_CP100136.1 Protein Homology CDS 1665339 1665956 . + 0 ID=cds-WP_251108033.1;Parent=gene-NIV78_RS07765;Dbxref=Genbank:WP_251108033.1;Name=WP_251108033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013343496.1;locus_tag=NIV78_RS07765;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_251108033.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1665961 1666218 . + . ID=gene-NIV78_RS07770;Name=NIV78_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07770 NZ_CP100136.1 Protein Homology CDS 1665961 1666218 . + 0 ID=cds-WP_232734649.1;Parent=gene-NIV78_RS07770;Dbxref=Genbank:WP_232734649.1;Name=WP_232734649.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017206.2;locus_tag=NIV78_RS07770;product=NAD(P)H-binding protein;protein_id=WP_232734649.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 1666199 1666732 . - . ID=gene-NIV78_RS07775;Name=NIV78_RS07775;end_range=1666732,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS07775;partial=true;pseudo=true NZ_CP100136.1 Protein Homology CDS 1666199 1666732 . - 0 ID=cds-NIV78_RS07775;Parent=gene-NIV78_RS07775;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=1666732,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492245.1;locus_tag=NIV78_RS07775;partial=true;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 1666817 1667634 . + . ID=gene-NIV78_RS07780;Name=NIV78_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07780 NZ_CP100136.1 Protein Homology CDS 1666817 1667165 . + 0 ID=cds-WP_085962362.1-3;Parent=gene-NIV78_RS07780;Dbxref=Genbank:WP_085962362.1;Name=WP_085962362.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS07780;product=IS5 family transposase;protein_id=WP_085962362.1;transl_table=11 NZ_CP100136.1 Protein Homology CDS 1667165 1667634 . + 2 ID=cds-WP_085962362.1-3;Parent=gene-NIV78_RS07780;Dbxref=Genbank:WP_085962362.1;Name=WP_085962362.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS07780;product=IS5 family transposase;protein_id=WP_085962362.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1667850 1668659 . + . ID=gene-NIV78_RS07785;Name=NIV78_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07785 NZ_CP100136.1 Protein Homology CDS 1667850 1668659 . + 0 ID=cds-WP_017924766.1;Parent=gene-NIV78_RS07785;Dbxref=Genbank:WP_017924766.1;Name=WP_017924766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424922.1;locus_tag=NIV78_RS07785;product=immunity 49 family protein;protein_id=WP_017924766.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1668730 1668921 . + . ID=gene-NIV78_RS07790;Name=bcpO;gbkey=Gene;gene=bcpO;gene_biotype=protein_coding;locus_tag=NIV78_RS07790 NZ_CP100136.1 Protein Homology CDS 1668730 1668921 . + 0 ID=cds-WP_236577888.1;Parent=gene-NIV78_RS07790;Dbxref=Genbank:WP_236577888.1;Name=WP_236577888.1;gbkey=CDS;gene=bcpO;inference=COORDINATES: protein motif:HMM:NF037971.1;locus_tag=NIV78_RS07790;product=CDI system lipoprotein BcpO;protein_id=WP_236577888.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1668965 1669770 . + . ID=gene-NIV78_RS07795;Name=NIV78_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07795 NZ_CP100136.1 Protein Homology CDS 1668965 1669295 . + 0 ID=cds-WP_257757360.1;Parent=gene-NIV78_RS07795;Dbxref=Genbank:WP_257757360.1;Name=WP_257757360.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611183.1;locus_tag=NIV78_RS07795;product=IS5 family transposase;protein_id=WP_257757360.1;transl_table=11 NZ_CP100136.1 Protein Homology CDS 1669295 1669770 . + 2 ID=cds-WP_257757360.1;Parent=gene-NIV78_RS07795;Dbxref=Genbank:WP_257757360.1;Name=WP_257757360.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611183.1;locus_tag=NIV78_RS07795;product=IS5 family transposase;protein_id=WP_257757360.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 1669822 1670258 . - . ID=gene-NIV78_RS07800;Name=NIV78_RS07800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS07800;partial=true;pseudo=true;start_range=.,1669822 NZ_CP100136.1 Protein Homology CDS 1669822 1670258 . - 0 ID=cds-NIV78_RS07800;Parent=gene-NIV78_RS07800;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006029867.1;locus_tag=NIV78_RS07800;partial=true;product=IS110 family transposase;pseudo=true;start_range=.,1669822;transl_table=11 NZ_CP100136.1 RefSeq gene 1670978 1672450 . + . ID=gene-NIV78_RS07805;Name=NIV78_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07805 NZ_CP100136.1 Protein Homology CDS 1670978 1672450 . + 0 ID=cds-WP_017432901.1;Parent=gene-NIV78_RS07805;Dbxref=Genbank:WP_017432901.1;Name=WP_017432901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424764.1;locus_tag=NIV78_RS07805;product=hypothetical protein;protein_id=WP_017432901.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 1672605 1672772 . - . ID=gene-NIV78_RS07810;Name=NIV78_RS07810;end_range=1672772,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS07810;partial=true;pseudo=true;start_range=.,1672605 NZ_CP100136.1 Protein Homology CDS 1672605 1672772 . - 0 ID=cds-NIV78_RS07810;Parent=gene-NIV78_RS07810;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1672772,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611183.1;locus_tag=NIV78_RS07810;partial=true;product=transposase;pseudo=true;start_range=.,1672605;transl_table=11 NZ_CP100136.1 RefSeq gene 1673186 1675123 . + . ID=gene-NIV78_RS07815;Name=NIV78_RS07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07815 NZ_CP100136.1 Protein Homology CDS 1673186 1675123 . + 0 ID=cds-WP_257757362.1;Parent=gene-NIV78_RS07815;Dbxref=Genbank:WP_257757362.1;Name=WP_257757362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875615.1;locus_tag=NIV78_RS07815;product=glycoside hydrolase family 55 protein;protein_id=WP_257757362.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1675704 1676657 . + . ID=gene-NIV78_RS07820;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=NIV78_RS07820 NZ_CP100136.1 Protein Homology CDS 1675704 1676657 . + 0 ID=cds-WP_241766825.1;Parent=gene-NIV78_RS07820;Dbxref=Genbank:WP_241766825.1;Name=WP_241766825.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004538329.1;locus_tag=NIV78_RS07820;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_241766825.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1676754 1676829 . + . ID=gene-NIV78_RS07825;Name=NIV78_RS07825;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS07825 NZ_CP100136.1 tRNAscan-SE tRNA 1676754 1676829 . + . ID=rna-NIV78_RS07825;Parent=gene-NIV78_RS07825;anticodon=(pos:1676787..1676789);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS07825;product=tRNA-His NZ_CP100136.1 tRNAscan-SE exon 1676754 1676829 . + . ID=exon-NIV78_RS07825-1;Parent=rna-NIV78_RS07825;anticodon=(pos:1676787..1676789);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS07825;product=tRNA-His NZ_CP100136.1 RefSeq gene 1676836 1676991 . - . ID=gene-NIV78_RS07830;Name=NIV78_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07830 NZ_CP100136.1 GeneMarkS-2+ CDS 1676836 1676991 . - 0 ID=cds-WP_157384121.1;Parent=gene-NIV78_RS07830;Dbxref=Genbank:WP_157384121.1;Name=WP_157384121.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS07830;product=hypothetical protein;protein_id=WP_157384121.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1677237 1677527 . - . ID=gene-NIV78_RS07835;Name=NIV78_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07835 NZ_CP100136.1 Protein Homology CDS 1677237 1677527 . - 0 ID=cds-WP_015875900.1;Parent=gene-NIV78_RS07835;Dbxref=Genbank:WP_015875900.1;Name=WP_015875900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875900.1;locus_tag=NIV78_RS07835;product=hypothetical protein;protein_id=WP_015875900.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1678357 1678833 . - . ID=gene-NIV78_RS07840;Name=NIV78_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07840 NZ_CP100136.1 Protein Homology CDS 1678357 1678833 . - 0 ID=cds-WP_015875899.1;Parent=gene-NIV78_RS07840;Dbxref=Genbank:WP_015875899.1;Name=WP_015875899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875899.1;locus_tag=NIV78_RS07840;product=helix-turn-helix transcriptional regulator;protein_id=WP_015875899.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1678994 1679431 . + . ID=gene-NIV78_RS07845;Name=NIV78_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07845 NZ_CP100136.1 Protein Homology CDS 1678994 1679431 . + 0 ID=cds-WP_015875898.1;Parent=gene-NIV78_RS07845;Dbxref=Genbank:WP_015875898.1;Name=WP_015875898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332380.1;locus_tag=NIV78_RS07845;product=PaaI family thioesterase;protein_id=WP_015875898.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 1679508 1679615 . + . ID=gene-NIV78_RS07850;Name=NIV78_RS07850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS07850;partial=true;pseudo=true;start_range=.,1679508 NZ_CP100136.1 Protein Homology CDS 1679508 1679615 . + 0 ID=cds-NIV78_RS07850;Parent=gene-NIV78_RS07850;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011517883.1;locus_tag=NIV78_RS07850;partial=true;product=neutral zinc metallopeptidase;pseudo=true;start_range=.,1679508;transl_table=11 NZ_CP100136.1 RefSeq gene 1679873 1680934 . + . ID=gene-NIV78_RS07855;Name=NIV78_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07855 NZ_CP100136.1 Protein Homology CDS 1679873 1680934 . + 0 ID=cds-WP_043225547.1;Parent=gene-NIV78_RS07855;Dbxref=Genbank:WP_043225547.1;Name=WP_043225547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193232.1;locus_tag=NIV78_RS07855;product=permease;protein_id=WP_043225547.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1681058 1681480 . + . ID=gene-NIV78_RS07860;Name=NIV78_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07860 NZ_CP100136.1 Protein Homology CDS 1681058 1681480 . + 0 ID=cds-WP_015875896.1;Parent=gene-NIV78_RS07860;Dbxref=Genbank:WP_015875896.1;Name=WP_015875896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697869.1;locus_tag=NIV78_RS07860;product=hypothetical protein;protein_id=WP_015875896.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1681686 1682516 . - . ID=gene-NIV78_RS07865;Name=NIV78_RS07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07865 NZ_CP100136.1 Protein Homology CDS 1681686 1682516 . - 0 ID=cds-WP_015875895.1;Parent=gene-NIV78_RS07865;Dbxref=Genbank:WP_015875895.1;Name=WP_015875895.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004545156.1;locus_tag=NIV78_RS07865;product=ABC transporter permease;protein_id=WP_015875895.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1682522 1683436 . - . ID=gene-NIV78_RS07870;Name=nodI;gbkey=Gene;gene=nodI;gene_biotype=protein_coding;locus_tag=NIV78_RS07870 NZ_CP100136.1 Protein Homology CDS 1682522 1683436 . - 0 ID=cds-WP_015875894.1;Parent=gene-NIV78_RS07870;Dbxref=Genbank:WP_015875894.1;Name=WP_015875894.1;gbkey=CDS;gene=nodI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004538328.1;locus_tag=NIV78_RS07870;product=nodulation factor ABC transporter ATP-binding protein NodI;protein_id=WP_015875894.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1683653 1684156 . + . ID=gene-NIV78_RS07875;Name=NIV78_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07875 NZ_CP100136.1 Protein Homology CDS 1683653 1684156 . + 0 ID=cds-WP_015875893.1;Parent=gene-NIV78_RS07875;Dbxref=Genbank:WP_015875893.1;Name=WP_015875893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875893.1;locus_tag=NIV78_RS07875;product=universal stress protein;protein_id=WP_015875893.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1684370 1685059 . - . ID=gene-NIV78_RS07880;Name=NIV78_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07880 NZ_CP100136.1 Protein Homology CDS 1684370 1685059 . - 0 ID=cds-WP_251107501.1;Parent=gene-NIV78_RS07880;Dbxref=Genbank:WP_251107501.1;Name=WP_251107501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875892.1;locus_tag=NIV78_RS07880;product=DUF2939 domain-containing protein;protein_id=WP_251107501.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1685113 1685445 . - . ID=gene-NIV78_RS07885;Name=NIV78_RS07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07885 NZ_CP100136.1 Protein Homology CDS 1685113 1685445 . - 0 ID=cds-WP_161520800.1;Parent=gene-NIV78_RS07885;Dbxref=Genbank:WP_161520800.1;Name=WP_161520800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875891.1;locus_tag=NIV78_RS07885;product=hypothetical protein;protein_id=WP_161520800.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1685532 1686179 . - . ID=gene-NIV78_RS07890;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=NIV78_RS07890 NZ_CP100136.1 Protein Homology CDS 1685532 1686179 . - 0 ID=cds-WP_035983643.1;Parent=gene-NIV78_RS07890;Dbxref=Genbank:WP_035983643.1;Name=WP_035983643.1;Ontology_term=GO:0006282,GO:0006355,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=regulation of DNA repair|0006282||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400150.1;locus_tag=NIV78_RS07890;product=transcriptional repressor LexA;protein_id=WP_035983643.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1686451 1687485 . + . ID=gene-NIV78_RS07895;Name=NIV78_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07895 NZ_CP100136.1 Protein Homology CDS 1686451 1687485 . + 0 ID=cds-WP_015875889.1;Parent=gene-NIV78_RS07895;Dbxref=Genbank:WP_015875889.1;Name=WP_015875889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400148.1;locus_tag=NIV78_RS07895;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_015875889.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1687647 1688546 . + . ID=gene-NIV78_RS07900;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=NIV78_RS07900 NZ_CP100136.1 Protein Homology CDS 1687647 1688546 . + 0 ID=cds-WP_017425328.1;Parent=gene-NIV78_RS07900;Dbxref=Genbank:WP_017425328.1;Name=WP_017425328.1;Ontology_term=GO:0008272,GO:0015419,GO:0005887,GO:0055052;gbkey=CDS;gene=cysT;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875888.1;locus_tag=NIV78_RS07900;product=sulfate ABC transporter permease subunit CysT;protein_id=WP_017425328.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1688543 1689463 . + . ID=gene-NIV78_RS07905;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=NIV78_RS07905 NZ_CP100136.1 Protein Homology CDS 1688543 1689463 . + 0 ID=cds-WP_017425329.1;Parent=gene-NIV78_RS07905;Dbxref=Genbank:WP_017425329.1;Name=WP_017425329.1;Ontology_term=GO:0008272,GO:0015419,GO:0005887,GO:0055052;gbkey=CDS;gene=cysW;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875887.1;locus_tag=NIV78_RS07905;product=sulfate ABC transporter permease subunit CysW;protein_id=WP_017425329.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1689481 1690542 . + . ID=gene-NIV78_RS07910;Name=NIV78_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07910 NZ_CP100136.1 Protein Homology CDS 1689481 1690542 . + 0 ID=cds-WP_169511812.1;Parent=gene-NIV78_RS07910;Dbxref=Genbank:WP_169511812.1;Name=WP_169511812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192434.1;locus_tag=NIV78_RS07910;product=sulfate ABC transporter ATP-binding protein;protein_id=WP_169511812.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1690601 1691530 . + . ID=gene-NIV78_RS07915;Name=NIV78_RS07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07915 NZ_CP100136.1 Protein Homology CDS 1690601 1691530 . + 0 ID=cds-WP_015875885.1;Parent=gene-NIV78_RS07915;Dbxref=Genbank:WP_015875885.1;Name=WP_015875885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875885.1;locus_tag=NIV78_RS07915;product=CysB family HTH-type transcriptional regulator;protein_id=WP_015875885.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1691911 1692867 . + . ID=gene-NIV78_RS07920;Name=NIV78_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07920 NZ_CP100136.1 Protein Homology CDS 1691911 1692867 . + 0 ID=cds-WP_017924110.1;Parent=gene-NIV78_RS07920;Dbxref=Genbank:WP_017924110.1;Name=WP_017924110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875884.1;locus_tag=NIV78_RS07920;product=sugar ABC transporter substrate-binding protein;protein_id=WP_017924110.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1692875 1694458 . + . ID=gene-NIV78_RS07925;Name=NIV78_RS07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07925 NZ_CP100136.1 Protein Homology CDS 1692875 1694458 . + 0 ID=cds-WP_153477625.1;Parent=gene-NIV78_RS07925;Dbxref=Genbank:WP_153477625.1;Name=WP_153477625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875883.1;locus_tag=NIV78_RS07925;product=sugar ABC transporter ATP-binding protein;protein_id=WP_153477625.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1694455 1695477 . + . ID=gene-NIV78_RS07930;Name=NIV78_RS07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07930 NZ_CP100136.1 Protein Homology CDS 1694455 1695477 . + 0 ID=cds-WP_015875882.1;Parent=gene-NIV78_RS07930;Dbxref=Genbank:WP_015875882.1;Name=WP_015875882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875882.1;locus_tag=NIV78_RS07930;product=ABC transporter permease;protein_id=WP_015875882.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1695502 1696548 . + . ID=gene-NIV78_RS07935;Name=NIV78_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07935 NZ_CP100136.1 Protein Homology CDS 1695502 1696548 . + 0 ID=cds-WP_015875881.1;Parent=gene-NIV78_RS07935;Dbxref=Genbank:WP_015875881.1;Name=WP_015875881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875881.1;locus_tag=NIV78_RS07935;product=LacI family transcriptional regulator;protein_id=WP_015875881.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1696545 1697486 . + . ID=gene-NIV78_RS07940;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=NIV78_RS07940 NZ_CP100136.1 Protein Homology CDS 1696545 1697486 . + 0 ID=cds-WP_035980078.1;Parent=gene-NIV78_RS07940;Dbxref=Genbank:WP_035980078.1;Name=WP_035980078.1;Ontology_term=GO:0019303,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose catabolic process|0019303||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004542269.1;locus_tag=NIV78_RS07940;product=ribokinase;protein_id=WP_035980078.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1698540 1700462 . + . ID=gene-NIV78_RS07945;Name=NIV78_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07945 NZ_CP100136.1 Protein Homology CDS 1698540 1700462 . + 0 ID=cds-WP_015875879.1;Parent=gene-NIV78_RS07945;Dbxref=Genbank:WP_015875879.1;Name=WP_015875879.1;Ontology_term=GO:0004672;gbkey=CDS;go_function=protein kinase activity|0004672||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020165153.1;locus_tag=NIV78_RS07945;product=PrkA family serine protein kinase;protein_id=WP_015875879.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1700577 1701842 . + . ID=gene-NIV78_RS07950;Name=NIV78_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07950 NZ_CP100136.1 Protein Homology CDS 1700577 1701842 . + 0 ID=cds-WP_015875878.1;Parent=gene-NIV78_RS07950;Dbxref=Genbank:WP_015875878.1;Name=WP_015875878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875878.1;locus_tag=NIV78_RS07950;product=YeaH/YhbH family protein;protein_id=WP_015875878.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1701847 1703523 . + . ID=gene-NIV78_RS07955;Name=NIV78_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07955 NZ_CP100136.1 Protein Homology CDS 1701847 1703523 . + 0 ID=cds-WP_015875877.1;Parent=gene-NIV78_RS07955;Dbxref=Genbank:WP_015875877.1;Name=WP_015875877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192871.1;locus_tag=NIV78_RS07955;product=SpoVR family protein;protein_id=WP_015875877.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1703830 1705134 . + . ID=gene-NIV78_RS07960;Name=NIV78_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07960 NZ_CP100136.1 Protein Homology CDS 1703830 1705134 . + 0 ID=cds-WP_017923313.1;Parent=gene-NIV78_RS07960;Dbxref=Genbank:WP_017923313.1;Name=WP_017923313.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754308.1;locus_tag=NIV78_RS07960;product=MFS family transporter;protein_id=WP_017923313.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1705324 1706115 . - . ID=gene-NIV78_RS07965;Name=NIV78_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07965 NZ_CP100136.1 Protein Homology CDS 1705324 1706115 . - 0 ID=cds-WP_015875875.1;Parent=gene-NIV78_RS07965;Dbxref=Genbank:WP_015875875.1;Name=WP_015875875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875875.1;locus_tag=NIV78_RS07965;product=DUF1275 domain-containing protein;protein_id=WP_015875875.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1706268 1707617 . - . ID=gene-NIV78_RS07970;Name=NIV78_RS07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07970 NZ_CP100136.1 Protein Homology CDS 1706268 1707617 . - 0 ID=cds-WP_251107500.1;Parent=gene-NIV78_RS07970;Dbxref=Genbank:WP_251107500.1;Name=WP_251107500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697891.1;locus_tag=NIV78_RS07970;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_251107500.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1708136 1708498 . + . ID=gene-NIV78_RS07975;Name=NIV78_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07975 NZ_CP100136.1 Protein Homology CDS 1708136 1708498 . + 0 ID=cds-WP_169512435.1;Parent=gene-NIV78_RS07975;Dbxref=Genbank:WP_169512435.1;Name=WP_169512435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014191582.1;locus_tag=NIV78_RS07975;product=transcriptional regulator;protein_id=WP_169512435.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1708551 1709867 . - . ID=gene-NIV78_RS07980;Name=NIV78_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07980 NZ_CP100136.1 Protein Homology CDS 1708551 1709867 . - 0 ID=cds-WP_251107499.1;Parent=gene-NIV78_RS07980;Dbxref=Genbank:WP_251107499.1;Name=WP_251107499.1;Ontology_term=GO:0042242;gbkey=CDS;go_function=cobyrinic acid a%2Cc-diamide synthase activity|0042242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875872.1;locus_tag=NIV78_RS07980;product=cobyrinate a%2Cc-diamide synthase;protein_id=WP_251107499.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1709882 1710484 . - . ID=gene-NIV78_RS07985;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=NIV78_RS07985 NZ_CP100136.1 Protein Homology CDS 1709882 1710484 . - 0 ID=cds-WP_015875871.1;Parent=gene-NIV78_RS07985;Dbxref=Genbank:WP_015875871.1;Name=WP_015875871.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018442736.1;locus_tag=NIV78_RS07985;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_015875871.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1710528 1710986 . - . ID=gene-NIV78_RS07990;Name=NIV78_RS07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS07990 NZ_CP100136.1 Protein Homology CDS 1710528 1710986 . - 0 ID=cds-WP_015875870.1;Parent=gene-NIV78_RS07990;Dbxref=Genbank:WP_015875870.1;Name=WP_015875870.1;Ontology_term=GO:0009236;gbkey=CDS;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004546528.1;locus_tag=NIV78_RS07990;product=cobalamin biosynthesis protein;protein_id=WP_015875870.1;transl_table=11 NZ_CP100136.1 cmsearch riboswitch 1711205 1711454 . - . ID=id-NZ_CP100136.1:1711205..1711454;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP100136.1 cmsearch riboswitch 1711547 1711812 . + . ID=id-NZ_CP100136.1:1711547..1711812;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP100136.1 RefSeq gene 1711981 1713048 . + . ID=gene-NIV78_RS07995;Name=cobW;gbkey=Gene;gene=cobW;gene_biotype=protein_coding;locus_tag=NIV78_RS07995 NZ_CP100136.1 Protein Homology CDS 1711981 1713048 . + 0 ID=cds-WP_017924015.1;Parent=gene-NIV78_RS07995;Dbxref=Genbank:WP_017924015.1;Name=WP_017924015.1;Ontology_term=GO:0009236;gbkey=CDS;gene=cobW;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009905387.1;locus_tag=NIV78_RS07995;product=cobalamin biosynthesis protein CobW;protein_id=WP_017924015.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1713065 1716943 . + . ID=gene-NIV78_RS08000;Name=cobN;gbkey=Gene;gene=cobN;gene_biotype=protein_coding;locus_tag=NIV78_RS08000 NZ_CP100136.1 Protein Homology CDS 1713065 1716943 . + 0 ID=cds-WP_251107498.1;Parent=gene-NIV78_RS08000;Dbxref=Genbank:WP_251107498.1;Name=WP_251107498.1;Ontology_term=GO:0009236,GO:0051116;gbkey=CDS;gene=cobN;go_function=cobaltochelatase activity|0051116||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011205065.1;locus_tag=NIV78_RS08000;product=cobaltochelatase subunit CobN;protein_id=WP_251107498.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1716940 1718037 . + . ID=gene-NIV78_RS08005;Name=NIV78_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08005 NZ_CP100136.1 Protein Homology CDS 1716940 1718037 . + 0 ID=cds-WP_251107497.1;Parent=gene-NIV78_RS08005;Dbxref=Genbank:WP_251107497.1;Name=WP_251107497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875867.1;locus_tag=NIV78_RS08005;product=ATP-binding protein;protein_id=WP_251107497.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1718130 1718699 . + . ID=gene-NIV78_RS08010;Name=NIV78_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08010 NZ_CP100136.1 Protein Homology CDS 1718130 1718699 . + 0 ID=cds-WP_045678975.1;Parent=gene-NIV78_RS08010;Dbxref=Genbank:WP_045678975.1;Name=WP_045678975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601763.1;locus_tag=NIV78_RS08010;product=VWA domain-containing protein;protein_id=WP_045678975.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1718894 1719661 . - . ID=gene-NIV78_RS08015;Name=NIV78_RS08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08015 NZ_CP100136.1 Protein Homology CDS 1718894 1719661 . - 0 ID=cds-WP_257757365.1;Parent=gene-NIV78_RS08015;Dbxref=Genbank:WP_257757365.1;Name=WP_257757365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425250.1;locus_tag=NIV78_RS08015;product=IclR family transcriptional regulator;protein_id=WP_257757365.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1719859 1721046 . + . ID=gene-NIV78_RS08020;Name=NIV78_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08020 NZ_CP100136.1 Protein Homology CDS 1719859 1721046 . + 0 ID=cds-WP_124837371.1;Parent=gene-NIV78_RS08020;Dbxref=Genbank:WP_124837371.1;Name=WP_124837371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425251.1;locus_tag=NIV78_RS08020;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_124837371.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1721078 1722181 . - . ID=gene-NIV78_RS08025;Name=NIV78_RS08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08025 NZ_CP100136.1 Protein Homology CDS 1721078 1722181 . - 0 ID=cds-WP_251107496.1;Parent=gene-NIV78_RS08025;Dbxref=Genbank:WP_251107496.1;Name=WP_251107496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875863.1;locus_tag=NIV78_RS08025;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=WP_251107496.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1722416 1724278 . - . ID=gene-NIV78_RS08030;Name=cobJ;gbkey=Gene;gene=cobJ;gene_biotype=protein_coding;locus_tag=NIV78_RS08030 NZ_CP100136.1 Protein Homology CDS 1722416 1724278 . - 0 ID=cds-WP_257757397.1;Parent=gene-NIV78_RS08030;Dbxref=Genbank:WP_257757397.1;Name=WP_257757397.1;Ontology_term=GO:0009236,GO:0030789;gbkey=CDS;gene=cobJ;go_function=precorrin-3B C17-methyltransferase activity|0030789||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697913.1;locus_tag=NIV78_RS08030;product=precorrin-3B C(17)-methyltransferase;protein_id=WP_257757397.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1724275 1725045 . - . ID=gene-NIV78_RS08035;Name=NIV78_RS08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08035 NZ_CP100136.1 Protein Homology CDS 1724275 1725045 . - 0 ID=cds-WP_100555637.1;Parent=gene-NIV78_RS08035;Dbxref=Genbank:WP_100555637.1;Name=WP_100555637.1;Ontology_term=GO:0009236,GO:0030788;gbkey=CDS;go_function=precorrin-2 C20-methyltransferase activity|0030788||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875861.1;locus_tag=NIV78_RS08035;product=precorrin-2 C(20)-methyltransferase;protein_id=WP_100555637.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1725042 1725668 . - . ID=gene-NIV78_RS08040;Name=NIV78_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08040 NZ_CP100136.1 Protein Homology CDS 1725042 1725668 . - 0 ID=cds-WP_015875860.1;Parent=gene-NIV78_RS08040;Dbxref=Genbank:WP_015875860.1;Name=WP_015875860.1;Ontology_term=GO:0009236,GO:0016993;gbkey=CDS;go_function=precorrin-8X methylmutase activity|0016993||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017778279.1;locus_tag=NIV78_RS08040;product=precorrin-8X methylmutase;protein_id=WP_015875860.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1725674 1726987 . - . ID=gene-NIV78_RS08045;Name=cobG;gbkey=Gene;gene=cobG;gene_biotype=protein_coding;locus_tag=NIV78_RS08045 NZ_CP100136.1 Protein Homology CDS 1725674 1726987 . - 0 ID=cds-WP_251107570.1;Parent=gene-NIV78_RS08045;Dbxref=Genbank:WP_251107570.1;Name=WP_251107570.1;Ontology_term=GO:0019250,GO:0016709;gbkey=CDS;gene=cobG;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=aerobic cobalamin biosynthetic process|0019250||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875859.1;locus_tag=NIV78_RS08045;product=precorrin-3B synthase;protein_id=WP_251107570.1;transl_table=11 NZ_CP100136.1 cmsearch riboswitch 1727220 1727410 . - . ID=id-NZ_CP100136.1:1727220..1727410;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP100136.1 RefSeq gene 1727515 1728735 . + . ID=gene-NIV78_RS08050;Name=cbiE;gbkey=Gene;gene=cbiE;gene_biotype=protein_coding;locus_tag=NIV78_RS08050 NZ_CP100136.1 Protein Homology CDS 1727515 1728735 . + 0 ID=cds-WP_153477623.1;Parent=gene-NIV78_RS08050;Dbxref=Genbank:WP_153477623.1;Name=WP_153477623.1;Ontology_term=GO:0046140,GO:0046025;gbkey=CDS;gene=cbiE;go_function=precorrin-6Y C5%2C15-methyltransferase (decarboxylating) activity|0046025||IEA;go_process=corrin biosynthetic process|0046140||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875858.1;locus_tag=NIV78_RS08050;product=precorrin-6y C5%2C15-methyltransferase (decarboxylating) subunit CbiE;protein_id=WP_153477623.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1728732 1729493 . + . ID=gene-NIV78_RS08055;Name=NIV78_RS08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08055 NZ_CP100136.1 Protein Homology CDS 1728732 1729493 . + 0 ID=cds-WP_169511816.1;Parent=gene-NIV78_RS08055;Dbxref=Genbank:WP_169511816.1;Name=WP_169511816.1;Ontology_term=GO:0009236,GO:0016994;gbkey=CDS;go_function=precorrin-6A reductase activity|0016994||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875857.1;locus_tag=NIV78_RS08055;product=cobalt-precorrin-6A reductase;protein_id=WP_169511816.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1729609 1730334 . + . ID=gene-NIV78_RS08060;Name=cobM;gbkey=Gene;gene=cobM;gene_biotype=protein_coding;locus_tag=NIV78_RS08060 NZ_CP100136.1 Protein Homology CDS 1729609 1730334 . + 0 ID=cds-WP_017924580.1;Parent=gene-NIV78_RS08060;Dbxref=Genbank:WP_017924580.1;Name=WP_017924580.1;Ontology_term=GO:0009236,GO:0046026,GO:0005737;gbkey=CDS;gene=cobM;go_component=cytoplasm|0005737||IEA;go_function=precorrin-4 C11-methyltransferase activity|0046026||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009905337.1;locus_tag=NIV78_RS08060;product=precorrin-4 C(11)-methyltransferase;protein_id=WP_017924580.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1730432 1731136 . - . ID=gene-NIV78_RS08065;Name=NIV78_RS08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08065 NZ_CP100136.1 Protein Homology CDS 1730432 1731136 . - 0 ID=cds-WP_017924581.1;Parent=gene-NIV78_RS08065;Dbxref=Genbank:WP_017924581.1;Name=WP_017924581.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213332.1;locus_tag=NIV78_RS08065;product=glutathione S-transferase N-terminal domain-containing protein;protein_id=WP_017924581.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1731345 1732985 . - . ID=gene-NIV78_RS08070;Name=NIV78_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08070 NZ_CP100136.1 Protein Homology CDS 1731345 1732985 . - 0 ID=cds-WP_015875854.1;Parent=gene-NIV78_RS08070;Dbxref=Genbank:WP_015875854.1;Name=WP_015875854.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875854.1;locus_tag=NIV78_RS08070;product=methyl-accepting chemotaxis protein;protein_id=WP_015875854.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1733198 1733473 . - . ID=gene-NIV78_RS08075;Name=NIV78_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08075 NZ_CP100136.1 GeneMarkS-2+ CDS 1733198 1733473 . - 0 ID=cds-WP_124837369.1;Parent=gene-NIV78_RS08075;Dbxref=Genbank:WP_124837369.1;Name=WP_124837369.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS08075;product=hypothetical protein;protein_id=WP_124837369.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1733510 1734352 . - . ID=gene-NIV78_RS08080;Name=NIV78_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08080 NZ_CP100136.1 Protein Homology CDS 1733510 1734352 . - 0 ID=cds-WP_015875853.1;Parent=gene-NIV78_RS08080;Dbxref=Genbank:WP_015875853.1;Name=WP_015875853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766417.1;locus_tag=NIV78_RS08080;product=ABC transporter permease;protein_id=WP_015875853.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1734349 1735329 . - . ID=gene-NIV78_RS08085;Name=NIV78_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08085 NZ_CP100136.1 Protein Homology CDS 1734349 1735329 . - 0 ID=cds-WP_015875852.1;Parent=gene-NIV78_RS08085;Dbxref=Genbank:WP_015875852.1;Name=WP_015875852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010115358.1;locus_tag=NIV78_RS08085;product=ABC transporter ATP-binding protein;protein_id=WP_015875852.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1735326 1736522 . - . ID=gene-NIV78_RS08090;Name=NIV78_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08090 NZ_CP100136.1 Protein Homology CDS 1735326 1736522 . - 0 ID=cds-WP_100555631.1;Parent=gene-NIV78_RS08090;Dbxref=Genbank:WP_100555631.1;Name=WP_100555631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875851.1;locus_tag=NIV78_RS08090;product=ABC transporter permease;protein_id=WP_100555631.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1736519 1737454 . - . ID=gene-NIV78_RS08095;Name=NIV78_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08095 NZ_CP100136.1 Protein Homology CDS 1736519 1737454 . - 0 ID=cds-WP_015875850.1;Parent=gene-NIV78_RS08095;Dbxref=Genbank:WP_015875850.1;Name=WP_015875850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875850.1;locus_tag=NIV78_RS08095;product=ABC transporter substrate-binding protein;protein_id=WP_015875850.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1737876 1738067 . + . ID=gene-NIV78_RS08100;Name=NIV78_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08100 NZ_CP100136.1 Protein Homology CDS 1737876 1738067 . + 0 ID=cds-WP_015875849.1;Parent=gene-NIV78_RS08100;Dbxref=Genbank:WP_015875849.1;Name=WP_015875849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875849.1;locus_tag=NIV78_RS08100;product=DUF3562 domain-containing protein;protein_id=WP_015875849.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1738304 1739278 . - . ID=gene-NIV78_RS08105;Name=NIV78_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08105 NZ_CP100136.1 Protein Homology CDS 1738304 1739278 . - 0 ID=cds-WP_015875848.1;Parent=gene-NIV78_RS08105;Dbxref=Genbank:WP_015875848.1;Name=WP_015875848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875848.1;locus_tag=NIV78_RS08105;product=sensor domain-containing diguanylate cyclase;protein_id=WP_015875848.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1739685 1739879 . + . ID=gene-NIV78_RS08110;Name=NIV78_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08110 NZ_CP100136.1 Protein Homology CDS 1739685 1739879 . + 0 ID=cds-WP_015875847.1;Parent=gene-NIV78_RS08110;Dbxref=Genbank:WP_015875847.1;Name=WP_015875847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875847.1;locus_tag=NIV78_RS08110;product=hypothetical protein;protein_id=WP_015875847.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1739910 1742045 . + . ID=gene-NIV78_RS08115;Name=NIV78_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08115 NZ_CP100136.1 Protein Homology CDS 1739910 1742045 . + 0 ID=cds-WP_015875846.1;Parent=gene-NIV78_RS08115;Dbxref=Genbank:WP_015875846.1;Name=WP_015875846.1;Ontology_term=GO:0004629;gbkey=CDS;go_function=phospholipase C activity|0004629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875846.1;locus_tag=NIV78_RS08115;product=phospholipase C%2C phosphocholine-specific;protein_id=WP_015875846.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1742243 1742464 . + . ID=gene-NIV78_RS08120;Name=NIV78_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08120 NZ_CP100136.1 Protein Homology CDS 1742243 1742464 . + 0 ID=cds-WP_015875845.1;Parent=gene-NIV78_RS08120;Dbxref=Genbank:WP_015875845.1;Name=WP_015875845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875845.1;locus_tag=NIV78_RS08120;product=hypothetical protein;protein_id=WP_015875845.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1742493 1742921 . - . ID=gene-NIV78_RS08125;Name=NIV78_RS08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08125 NZ_CP100136.1 Protein Homology CDS 1742493 1742921 . - 0 ID=cds-WP_017923344.1;Parent=gene-NIV78_RS08125;Dbxref=Genbank:WP_017923344.1;Name=WP_017923344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423410.1;locus_tag=NIV78_RS08125;product=CBS domain-containing protein;protein_id=WP_017923344.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1743040 1743591 . + . ID=gene-NIV78_RS08130;Name=NIV78_RS08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08130 NZ_CP100136.1 Protein Homology CDS 1743040 1743591 . + 0 ID=cds-WP_017923345.1;Parent=gene-NIV78_RS08130;Dbxref=Genbank:WP_017923345.1;Name=WP_017923345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875843.1;locus_tag=NIV78_RS08130;product=membrane protein;protein_id=WP_017923345.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1743975 1744520 . + . ID=gene-NIV78_RS08135;Name=NIV78_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08135 NZ_CP100136.1 Protein Homology CDS 1743975 1744520 . + 0 ID=cds-WP_017423412.1;Parent=gene-NIV78_RS08135;Dbxref=Genbank:WP_017423412.1;Name=WP_017423412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423412.1;locus_tag=NIV78_RS08135;product=DUF3005 domain-containing protein;protein_id=WP_017423412.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1744834 1746057 . + . ID=gene-NIV78_RS08140;Name=NIV78_RS08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08140 NZ_CP100136.1 Protein Homology CDS 1744834 1746057 . + 0 ID=cds-WP_015875841.1;Parent=gene-NIV78_RS08140;Dbxref=Genbank:WP_015875841.1;Name=WP_015875841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013093705.1;locus_tag=NIV78_RS08140;product=YeeE/YedE family protein;protein_id=WP_015875841.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1746189 1746617 . + . ID=gene-NIV78_RS08145;Name=NIV78_RS08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08145 NZ_CP100136.1 Protein Homology CDS 1746189 1746617 . + 0 ID=cds-WP_015875840.1;Parent=gene-NIV78_RS08145;Dbxref=Genbank:WP_015875840.1;Name=WP_015875840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875840.1;locus_tag=NIV78_RS08145;product=hypothetical protein;protein_id=WP_015875840.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1746638 1747201 . + . ID=gene-NIV78_RS08150;Name=NIV78_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08150 NZ_CP100136.1 GeneMarkS-2+ CDS 1746638 1747201 . + 0 ID=cds-WP_017433026.1;Parent=gene-NIV78_RS08150;Dbxref=Genbank:WP_017433026.1;Name=WP_017433026.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS08150;product=hypothetical protein;protein_id=WP_017433026.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1747244 1747744 . - . ID=gene-NIV78_RS08155;Name=NIV78_RS08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08155 NZ_CP100136.1 Protein Homology CDS 1747244 1747744 . - 0 ID=cds-WP_015875839.1;Parent=gene-NIV78_RS08155;Dbxref=Genbank:WP_015875839.1;Name=WP_015875839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875839.1;locus_tag=NIV78_RS08155;product=hypothetical protein;protein_id=WP_015875839.1;transl_table=11 NZ_CP100136.1 RefSeq direct_repeat 1747990 1748497 . + . ID=id-NZ_CP100136.1:1747990..1748497;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=1747990..1748017;rpt_unit_seq=gtttgctgccgggtaggcagcttagaaa NZ_CP100136.1 RefSeq gene 1748503 1749320 . - . ID=gene-NIV78_RS08160;Name=NIV78_RS08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08160 NZ_CP100136.1 Protein Homology CDS 1748972 1749320 . - 0 ID=cds-WP_085962356.1-2;Parent=gene-NIV78_RS08160;Dbxref=Genbank:WP_085962356.1;Name=WP_085962356.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS08160;product=IS5 family transposase;protein_id=WP_085962356.1;transl_table=11 NZ_CP100136.1 Protein Homology CDS 1748503 1748972 . - 2 ID=cds-WP_085962356.1-2;Parent=gene-NIV78_RS08160;Dbxref=Genbank:WP_085962356.1;Name=WP_085962356.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS08160;product=IS5 family transposase;protein_id=WP_085962356.1;transl_table=11 NZ_CP100136.1 RefSeq direct_repeat 1749447 1749656 . + . ID=id-NZ_CP100136.1:1749447..1749656;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=1749507..1749537;rpt_unit_seq=cgtttgctgccgggtaggcagcttagaaaat NZ_CP100136.1 RefSeq gene 1749756 1750748 . + . ID=gene-NIV78_RS08165;Name=cas1f;gbkey=Gene;gene=cas1f;gene_biotype=protein_coding;locus_tag=NIV78_RS08165 NZ_CP100136.1 Protein Homology CDS 1749756 1750748 . + 0 ID=cds-WP_257757366.1;Parent=gene-NIV78_RS08165;Dbxref=Genbank:WP_257757366.1;Name=WP_257757366.1;Ontology_term=GO:0043571,GO:0004520;gbkey=CDS;gene=cas1f;go_function=endodeoxyribonuclease activity|0004520||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011803949.1;locus_tag=NIV78_RS08165;product=type I-F CRISPR-associated endonuclease Cas1f;protein_id=WP_257757366.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1750745 1754278 . + . ID=gene-NIV78_RS08170;Name=cas3f;gbkey=Gene;gene=cas3f;gene_biotype=protein_coding;locus_tag=NIV78_RS08170 NZ_CP100136.1 Protein Homology CDS 1750745 1754278 . + 0 ID=cds-WP_017923025.1;Parent=gene-NIV78_RS08170;Dbxref=Genbank:WP_017923025.1;Name=WP_017923025.1;Ontology_term=GO:0043571,GO:0004386;gbkey=CDS;gene=cas3f;go_function=helicase activity|0004386||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106220.1;locus_tag=NIV78_RS08170;product=type I-F CRISPR-associated helicase Cas3f;protein_id=WP_017923025.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1754389 1754628 . - . ID=gene-NIV78_RS08175;Name=NIV78_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08175 NZ_CP100136.1 GeneMarkS-2+ CDS 1754389 1754628 . - 0 ID=cds-WP_251108066.1;Parent=gene-NIV78_RS08175;Dbxref=Genbank:WP_251108066.1;Name=WP_251108066.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS08175;product=hypothetical protein;protein_id=WP_251108066.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1754650 1756023 . + . ID=gene-NIV78_RS08180;Name=csy1;gbkey=Gene;gene=csy1;gene_biotype=protein_coding;locus_tag=NIV78_RS08180 NZ_CP100136.1 Protein Homology CDS 1754650 1756023 . + 0 ID=cds-WP_017923024.1;Parent=gene-NIV78_RS08180;Dbxref=Genbank:WP_017923024.1;Name=WP_017923024.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=csy1;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106219.1;locus_tag=NIV78_RS08180;product=type I-F CRISPR-associated protein Csy1;protein_id=WP_017923024.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1756020 1757069 . + . ID=gene-NIV78_RS08185;Name=csy2;gbkey=Gene;gene=csy2;gene_biotype=protein_coding;locus_tag=NIV78_RS08185 NZ_CP100136.1 Protein Homology CDS 1756020 1757069 . + 0 ID=cds-WP_017923023.1;Parent=gene-NIV78_RS08185;Dbxref=Genbank:WP_017923023.1;Name=WP_017923023.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=csy2;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012203144.1;locus_tag=NIV78_RS08185;product=type I-F CRISPR-associated protein Csy2;protein_id=WP_017923023.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1757141 1758169 . + . ID=gene-NIV78_RS08190;Name=csy3;gbkey=Gene;gene=csy3;gene_biotype=protein_coding;locus_tag=NIV78_RS08190 NZ_CP100136.1 Protein Homology CDS 1757141 1758169 . + 0 ID=cds-WP_017923022.1;Parent=gene-NIV78_RS08190;Dbxref=Genbank:WP_017923022.1;Name=WP_017923022.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=csy3;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012203145.1;locus_tag=NIV78_RS08190;product=type I-F CRISPR-associated protein Csy3;protein_id=WP_017923022.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1758175 1758741 . + . ID=gene-NIV78_RS08195;Name=cas6f;gbkey=Gene;gene=cas6f;gene_biotype=protein_coding;locus_tag=NIV78_RS08195 NZ_CP100136.1 Protein Homology CDS 1758175 1758741 . + 0 ID=cds-WP_017923021.1;Parent=gene-NIV78_RS08195;Dbxref=Genbank:WP_017923021.1;Name=WP_017923021.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas6f;go_function=endoribonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016451880.1;locus_tag=NIV78_RS08195;product=type I-F CRISPR-associated endoribonuclease Cas6/Csy4;protein_id=WP_017923021.1;transl_table=11 NZ_CP100136.1 RefSeq direct_repeat 1758871 1759501 . + . ID=id-NZ_CP100136.1:1758871..1759501;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=1758871..1758898;rpt_unit_seq=gttcgctgccgtgtaggcagcttagaaa NZ_CP100136.1 RefSeq pseudogene 1759814 1760788 . + . ID=gene-NIV78_RS08200;Name=NIV78_RS08200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS08200;pseudo=true NZ_CP100136.1 Protein Homology CDS 1759814 1760788 . + 0 ID=cds-NIV78_RS08200;Parent=gene-NIV78_RS08200;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012673146.1;locus_tag=NIV78_RS08200;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 1760822 1761624 . + . ID=gene-NIV78_RS08205;Name=NIV78_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08205 NZ_CP100136.1 Protein Homology CDS 1760822 1761155 . + 0 ID=cds-WP_257757398.1;Parent=gene-NIV78_RS08205;Dbxref=Genbank:WP_257757398.1;Name=WP_257757398.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS08205;product=IS5-like element ISBugl2 family transposase;protein_id=WP_257757398.1;transl_table=11 NZ_CP100136.1 Protein Homology CDS 1761155 1761624 . + 2 ID=cds-WP_257757398.1;Parent=gene-NIV78_RS08205;Dbxref=Genbank:WP_257757398.1;Name=WP_257757398.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS08205;product=IS5-like element ISBugl2 family transposase;protein_id=WP_257757398.1;transl_table=11 NZ_CP100136.1 RefSeq direct_repeat 1761673 1761881 . + . ID=id-NZ_CP100136.1:1761673..1761881;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=1761673..1761700;rpt_unit_seq=gttcgctgccgtgtaggcagcttagaaa NZ_CP100136.1 RefSeq pseudogene 1761900 1762248 . + . ID=gene-NIV78_RS08210;Name=NIV78_RS08210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS08210;partial=true;pseudo=true;start_range=.,1761900 NZ_CP100136.1 Protein Homology CDS 1761900 1762248 . + 0 ID=cds-NIV78_RS08210;Parent=gene-NIV78_RS08210;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558218.1;locus_tag=NIV78_RS08210;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,1761900;transl_table=11 NZ_CP100136.1 RefSeq gene 1762481 1762684 . + . ID=gene-NIV78_RS08215;Name=NIV78_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08215 NZ_CP100136.1 Protein Homology CDS 1762481 1762684 . + 0 ID=cds-WP_017423969.1;Parent=gene-NIV78_RS08215;Dbxref=Genbank:WP_017423969.1;Name=WP_017423969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003230776.1;locus_tag=NIV78_RS08215;product=cold-shock protein;protein_id=WP_017423969.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1762750 1763103 . + . ID=gene-NIV78_RS08220;Name=NIV78_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08220 NZ_CP100136.1 GeneMarkS-2+ CDS 1762750 1763103 . + 0 ID=cds-WP_085967313.1;Parent=gene-NIV78_RS08220;Dbxref=Genbank:WP_085967313.1;Name=WP_085967313.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS08220;product=hypothetical protein;protein_id=WP_085967313.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1763199 1763465 . + . ID=gene-NIV78_RS08225;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=NIV78_RS08225 NZ_CP100136.1 Protein Homology CDS 1763199 1763465 . + 0 ID=cds-WP_015875838.1;Parent=gene-NIV78_RS08225;Dbxref=Genbank:WP_015875838.1;Name=WP_015875838.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004201563.1;locus_tag=NIV78_RS08225;product=translation initiation factor IF-1;protein_id=WP_015875838.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1763558 1763770 . + . ID=gene-NIV78_RS08230;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=NIV78_RS08230 NZ_CP100136.1 Protein Homology CDS 1763558 1763770 . + 0 ID=cds-WP_015875837.1;Parent=gene-NIV78_RS08230;Dbxref=Genbank:WP_015875837.1;Name=WP_015875837.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsU;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202502.1;locus_tag=NIV78_RS08230;product=30S ribosomal protein S21;protein_id=WP_015875837.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 1763979 1764282 . - . ID=gene-NIV78_RS08235;Name=NIV78_RS08235;end_range=1764282,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS08235;partial=true;pseudo=true;start_range=.,1763979 NZ_CP100136.1 Protein Homology CDS 1763979 1764282 . - 0 ID=cds-NIV78_RS08235;Parent=gene-NIV78_RS08235;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1764282,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020066826.1;locus_tag=NIV78_RS08235;partial=true;product=SDR family oxidoreductase;pseudo=true;start_range=.,1763979;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 1764298 1765069 . - . ID=gene-NIV78_RS08240;Name=NIV78_RS08240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS08240;pseudo=true NZ_CP100136.1 Protein Homology CDS 1764298 1765069 . - 0 ID=cds-NIV78_RS08240;Parent=gene-NIV78_RS08240;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900855.1;locus_tag=NIV78_RS08240;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 1765224 1765976 . + . ID=gene-NIV78_RS08245;Name=NIV78_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08245 NZ_CP100136.1 Protein Homology CDS 1765224 1765976 . + 0 ID=cds-WP_017423971.1;Parent=gene-NIV78_RS08245;Dbxref=Genbank:WP_017423971.1;Name=WP_017423971.1;Ontology_term=GO:0003676,GO:0016787,GO:0046872;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875836.1;locus_tag=NIV78_RS08245;product=DNA/RNA non-specific endonuclease;protein_id=WP_017423971.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1765969 1766238 . + . ID=gene-NIV78_RS08250;Name=NIV78_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08250 NZ_CP100136.1 Protein Homology CDS 1765969 1766238 . + 0 ID=cds-WP_015875835.1;Parent=gene-NIV78_RS08250;Dbxref=Genbank:WP_015875835.1;Name=WP_015875835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875835.1;locus_tag=NIV78_RS08250;product=hypothetical protein;protein_id=WP_015875835.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1766341 1767285 . + . ID=gene-NIV78_RS08255;Name=NIV78_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08255 NZ_CP100136.1 Protein Homology CDS 1766341 1767285 . + 0 ID=cds-WP_015875834.1;Parent=gene-NIV78_RS08255;Dbxref=Genbank:WP_015875834.1;Name=WP_015875834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875834.1;locus_tag=NIV78_RS08255;product=GlxA family transcriptional regulator;protein_id=WP_015875834.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1767372 1767686 . - . ID=gene-NIV78_RS08260;Name=NIV78_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08260 NZ_CP100136.1 Protein Homology CDS 1767372 1767686 . - 0 ID=cds-WP_015875833.1;Parent=gene-NIV78_RS08260;Dbxref=Genbank:WP_015875833.1;Name=WP_015875833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875833.1;locus_tag=NIV78_RS08260;product=hypothetical protein;protein_id=WP_015875833.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1767673 1769046 . - . ID=gene-NIV78_RS08265;Name=NIV78_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08265 NZ_CP100136.1 Protein Homology CDS 1767673 1769046 . - 0 ID=cds-WP_251107425.1;Parent=gene-NIV78_RS08265;Dbxref=Genbank:WP_251107425.1;Name=WP_251107425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875832.1;locus_tag=NIV78_RS08265;product=acyclic terpene utilization AtuA family protein;protein_id=WP_251107425.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1769098 1770399 . - . ID=gene-NIV78_RS08270;Name=NIV78_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08270 NZ_CP100136.1 Protein Homology CDS 1769098 1770399 . - 0 ID=cds-WP_043227591.1;Parent=gene-NIV78_RS08270;Dbxref=Genbank:WP_043227591.1;Name=WP_043227591.1;Ontology_term=GO:0015746,GO:0015137,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=citrate transmembrane transporter activity|0015137||IEA;go_process=citrate transport|0015746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007733640.1;locus_tag=NIV78_RS08270;product=citrate:proton symporter;protein_id=WP_043227591.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1770510 1771433 . + . ID=gene-NIV78_RS08275;Name=NIV78_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08275 NZ_CP100136.1 Protein Homology CDS 1770510 1771433 . + 0 ID=cds-WP_161520812.1;Parent=gene-NIV78_RS08275;Dbxref=Genbank:WP_161520812.1;Name=WP_161520812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875830.1;locus_tag=NIV78_RS08275;product=LysR family transcriptional regulator;protein_id=WP_161520812.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1771765 1772613 . + . ID=gene-NIV78_RS08280;Name=NIV78_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08280 NZ_CP100136.1 Protein Homology CDS 1771765 1772613 . + 0 ID=cds-WP_015875829.1;Parent=gene-NIV78_RS08280;Dbxref=Genbank:WP_015875829.1;Name=WP_015875829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697951.1;locus_tag=NIV78_RS08280;product=transporter substrate-binding domain-containing protein;protein_id=WP_015875829.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1772714 1773439 . + . ID=gene-NIV78_RS08285;Name=NIV78_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08285 NZ_CP100136.1 Protein Homology CDS 1772714 1773439 . + 0 ID=cds-WP_015875828.1;Parent=gene-NIV78_RS08285;Dbxref=Genbank:WP_015875828.1;Name=WP_015875828.1;Note=The N-terminal region of this protein%2C as described by TIGR01726%2C is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits%2C which specificities that include histidine%2C arginine%2C glutamine%2C glutamate%2C L-cystine (sic)%2C the opines (in Agrobacterium) octopine and nopaline%2C etc.;Ontology_term=GO:0015837,GO:0005887,GO:0055052;gbkey=CDS;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amine transport|0015837||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875828.1;locus_tag=NIV78_RS08285;product=ABC transporter permease subunit;protein_id=WP_015875828.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1773458 1774204 . + . ID=gene-NIV78_RS08290;Name=NIV78_RS08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08290 NZ_CP100136.1 Protein Homology CDS 1773458 1774204 . + 0 ID=cds-WP_015875827.1;Parent=gene-NIV78_RS08290;Dbxref=Genbank:WP_015875827.1;Name=WP_015875827.1;Note=The N-terminal region of this protein%2C as described by TIGR01726%2C is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits%2C which specificities that include histidine%2C arginine%2C glutamine%2C glutamate%2C L-cystine (sic)%2C the opines (in Agrobacterium) octopine and nopaline%2C etc.;Ontology_term=GO:0015837,GO:0005887,GO:0055052;gbkey=CDS;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amine transport|0015837||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013343105.1;locus_tag=NIV78_RS08290;product=ABC transporter permease subunit;protein_id=WP_015875827.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1774236 1775027 . + . ID=gene-NIV78_RS08295;Name=NIV78_RS08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08295 NZ_CP100136.1 Protein Homology CDS 1774236 1775027 . + 0 ID=cds-WP_257757369.1;Parent=gene-NIV78_RS08295;Dbxref=Genbank:WP_257757369.1;Name=WP_257757369.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013592029.1;locus_tag=NIV78_RS08295;product=ATP-binding cassette domain-containing protein;protein_id=WP_257757369.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1775104 1776714 . + . ID=gene-NIV78_RS08300;Name=NIV78_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08300 NZ_CP100136.1 Protein Homology CDS 1775104 1776714 . + 0 ID=cds-WP_153477607.1;Parent=gene-NIV78_RS08300;Dbxref=Genbank:WP_153477607.1;Name=WP_153477607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697955.1;locus_tag=NIV78_RS08300;product=histidine ammonia-lyase;protein_id=WP_153477607.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1776777 1777514 . + . ID=gene-NIV78_RS08305;Name=hutC;gbkey=Gene;gene=hutC;gene_biotype=protein_coding;locus_tag=NIV78_RS08305 NZ_CP100136.1 Protein Homology CDS 1776777 1777514 . + 0 ID=cds-WP_035977846.1;Parent=gene-NIV78_RS08305;Dbxref=Genbank:WP_035977846.1;Name=WP_035977846.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hutC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697956.1;locus_tag=NIV78_RS08305;product=histidine utilization repressor;protein_id=WP_035977846.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1777648 1779789 . - . ID=gene-NIV78_RS08310;Name=NIV78_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08310 NZ_CP100136.1 Protein Homology CDS 1777648 1779789 . - 0 ID=cds-WP_015875823.1;Parent=gene-NIV78_RS08310;Dbxref=Genbank:WP_015875823.1;Name=WP_015875823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204896.1;locus_tag=NIV78_RS08310;product=M1 family metallopeptidase;protein_id=WP_015875823.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1780829 1782133 . + . ID=gene-NIV78_RS08315;Name=NIV78_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08315 NZ_CP100136.1 Protein Homology CDS 1780829 1782133 . + 0 ID=cds-WP_015875822.1;Parent=gene-NIV78_RS08315;Dbxref=Genbank:WP_015875822.1;Name=WP_015875822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875822.1;locus_tag=NIV78_RS08315;product=L-fuconate dehydratase;protein_id=WP_015875822.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1782203 1782979 . + . ID=gene-NIV78_RS08320;Name=NIV78_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08320 NZ_CP100136.1 Protein Homology CDS 1782203 1782979 . + 0 ID=cds-WP_015875821.1;Parent=gene-NIV78_RS08320;Dbxref=Genbank:WP_015875821.1;Name=WP_015875821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749502.1;locus_tag=NIV78_RS08320;product=SDR family oxidoreductase;protein_id=WP_015875821.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1783067 1783405 . + . ID=gene-NIV78_RS08325;Name=NIV78_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08325 NZ_CP100136.1 Protein Homology CDS 1783067 1783405 . + 0 ID=cds-WP_015875820.1;Parent=gene-NIV78_RS08325;Dbxref=Genbank:WP_015875820.1;Name=WP_015875820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009897510.1;locus_tag=NIV78_RS08325;product=L-rhamnose mutarotase;protein_id=WP_015875820.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1783473 1784720 . + . ID=gene-NIV78_RS08330;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=NIV78_RS08330 NZ_CP100136.1 Protein Homology CDS 1783473 1784720 . + 0 ID=cds-WP_017923960.1;Parent=gene-NIV78_RS08330;Dbxref=Genbank:WP_017923960.1;Name=WP_017923960.1;Ontology_term=GO:0015756,GO:0015535,GO:0005887;gbkey=CDS;gene=fucP;go_component=integral component of plasma membrane|0005887||IEA;go_function=fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875819.1;locus_tag=NIV78_RS08330;product=L-fucose:H+ symporter permease;protein_id=WP_017923960.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1784860 1785606 . + . ID=gene-NIV78_RS08335;Name=NIV78_RS08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08335 NZ_CP100136.1 Protein Homology CDS 1784860 1785606 . + 0 ID=cds-WP_017923959.1;Parent=gene-NIV78_RS08335;Dbxref=Genbank:WP_017923959.1;Name=WP_017923959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424386.1;locus_tag=NIV78_RS08335;product=FadR family transcriptional regulator;protein_id=WP_017923959.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1785613 1786245 . - . ID=gene-NIV78_RS08340;Name=NIV78_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08340 NZ_CP100136.1 Protein Homology CDS 1785613 1786245 . - 0 ID=cds-WP_015875817.1;Parent=gene-NIV78_RS08340;Dbxref=Genbank:WP_015875817.1;Name=WP_015875817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017232550.1;locus_tag=NIV78_RS08340;product=LUD domain-containing protein;protein_id=WP_015875817.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1786242 1787723 . - . ID=gene-NIV78_RS08345;Name=NIV78_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08345 NZ_CP100136.1 Protein Homology CDS 1786242 1787723 . - 0 ID=cds-WP_015875816.1;Parent=gene-NIV78_RS08345;Dbxref=Genbank:WP_015875816.1;Name=WP_015875816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875816.1;locus_tag=NIV78_RS08345;product=lactate utilization protein;protein_id=WP_015875816.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1787720 1788532 . - . ID=gene-NIV78_RS08350;Name=NIV78_RS08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08350 NZ_CP100136.1 Protein Homology CDS 1787720 1788532 . - 0 ID=cds-WP_015875815.1;Parent=gene-NIV78_RS08350;Dbxref=Genbank:WP_015875815.1;Name=WP_015875815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875815.1;locus_tag=NIV78_RS08350;product=(Fe-S)-binding protein;protein_id=WP_015875815.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1788754 1789467 . + . ID=gene-NIV78_RS08355;Name=NIV78_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08355 NZ_CP100136.1 Protein Homology CDS 1788754 1789467 . + 0 ID=cds-WP_017923772.1;Parent=gene-NIV78_RS08355;Dbxref=Genbank:WP_017923772.1;Name=WP_017923772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875814.1;locus_tag=NIV78_RS08355;product=FadR family transcriptional regulator;protein_id=WP_017923772.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1789558 1790745 . + . ID=gene-NIV78_RS08360;Name=NIV78_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08360 NZ_CP100136.1 Protein Homology CDS 1789558 1790745 . + 0 ID=cds-WP_015875813.1;Parent=gene-NIV78_RS08360;Dbxref=Genbank:WP_015875813.1;Name=WP_015875813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750208.1;locus_tag=NIV78_RS08360;product=amidohydrolase family protein;protein_id=WP_015875813.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1791021 1791488 . + . ID=gene-NIV78_RS08365;Name=NIV78_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08365 NZ_CP100136.1 Protein Homology CDS 1791021 1791488 . + 0 ID=cds-WP_015875812.1;Parent=gene-NIV78_RS08365;Dbxref=Genbank:WP_015875812.1;Name=WP_015875812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691529.1;locus_tag=NIV78_RS08365;product=hypothetical protein;protein_id=WP_015875812.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1791598 1792554 . - . ID=gene-NIV78_RS08370;Name=NIV78_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08370 NZ_CP100136.1 Protein Homology CDS 1791598 1792554 . - 0 ID=cds-WP_015875811.1;Parent=gene-NIV78_RS08370;Dbxref=Genbank:WP_015875811.1;Name=WP_015875811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875811.1;locus_tag=NIV78_RS08370;product=LysR family transcriptional regulator;protein_id=WP_015875811.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1792672 1794423 . + . ID=gene-NIV78_RS08375;Name=NIV78_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08375 NZ_CP100136.1 Protein Homology CDS 1792672 1794423 . + 0 ID=cds-WP_015875810.1;Parent=gene-NIV78_RS08375;Dbxref=Genbank:WP_015875810.1;Name=WP_015875810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494293.1;locus_tag=NIV78_RS08375;product=dihydroxy-acid dehydratase;protein_id=WP_015875810.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1794519 1795865 . + . ID=gene-NIV78_RS08380;Name=NIV78_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08380 NZ_CP100136.1 Protein Homology CDS 1794519 1795865 . + 0 ID=cds-WP_015875809.1;Parent=gene-NIV78_RS08380;Dbxref=Genbank:WP_015875809.1;Name=WP_015875809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875809.1;locus_tag=NIV78_RS08380;product=MFS transporter;protein_id=WP_015875809.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1795922 1796851 . + . ID=gene-NIV78_RS08385;Name=NIV78_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08385 NZ_CP100136.1 Protein Homology CDS 1795922 1796851 . + 0 ID=cds-WP_017922674.1;Parent=gene-NIV78_RS08385;Dbxref=Genbank:WP_017922674.1;Name=WP_017922674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339099.1;locus_tag=NIV78_RS08385;product=dihydrodipicolinate synthase family protein;protein_id=WP_017922674.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1796864 1797802 . + . ID=gene-NIV78_RS08390;Name=NIV78_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08390 NZ_CP100136.1 Protein Homology CDS 1796864 1797802 . + 0 ID=cds-WP_015875807.1;Parent=gene-NIV78_RS08390;Dbxref=Genbank:WP_015875807.1;Name=WP_015875807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875807.1;locus_tag=NIV78_RS08390;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_015875807.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1797846 1798850 . + . ID=gene-NIV78_RS08395;Name=NIV78_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08395 NZ_CP100136.1 Protein Homology CDS 1797846 1798850 . + 0 ID=cds-WP_015875806.1;Parent=gene-NIV78_RS08395;Dbxref=Genbank:WP_015875806.1;Name=WP_015875806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758832.1;locus_tag=NIV78_RS08395;product=arabinose ABC transporter substrate-binding protein;protein_id=WP_015875806.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1798887 1800428 . + . ID=gene-NIV78_RS08400;Name=araG;gbkey=Gene;gene=araG;gene_biotype=protein_coding;locus_tag=NIV78_RS08400 NZ_CP100136.1 Protein Homology CDS 1798887 1800428 . + 0 ID=cds-WP_015875805.1;Parent=gene-NIV78_RS08400;Dbxref=Genbank:WP_015875805.1;Name=WP_015875805.1;Ontology_term=GO:0042882,GO:0005524,GO:0015612,GO:0016020;gbkey=CDS;gene=araG;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type L-arabinose transporter activity|0015612||IEA;go_process=L-arabinose transmembrane transport|0042882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404694.1;locus_tag=NIV78_RS08400;product=L-arabinose ABC transporter ATP-binding protein AraG;protein_id=WP_015875805.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1800491 1801501 . + . ID=gene-NIV78_RS08405;Name=araH;gbkey=Gene;gene=araH;gene_biotype=protein_coding;locus_tag=NIV78_RS08405 NZ_CP100136.1 Protein Homology CDS 1800491 1801501 . + 0 ID=cds-WP_015875804.1;Parent=gene-NIV78_RS08405;Dbxref=Genbank:WP_015875804.1;Name=WP_015875804.1;Ontology_term=GO:0055085,GO:0022857,GO:0016021;gbkey=CDS;gene=araH;go_component=integral component of membrane|0016021||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875804.1;locus_tag=NIV78_RS08405;product=L-arabinose ABC transporter permease AraH;protein_id=WP_015875804.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1801761 1802654 . - . ID=gene-NIV78_RS08410;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=NIV78_RS08410 NZ_CP100136.1 Protein Homology CDS 1801761 1802654 . - 0 ID=cds-WP_026051576.1;Parent=gene-NIV78_RS08410;Dbxref=Genbank:WP_026051576.1;Name=WP_026051576.1;Ontology_term=GO:0006810,GO:0005215,GO:0005887;gbkey=CDS;gene=rarD;go_component=integral component of plasma membrane|0005887||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875803.1;locus_tag=NIV78_RS08410;product=EamA family transporter RarD;protein_id=WP_026051576.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1802796 1802918 . - . ID=gene-NIV78_RS08415;Name=NIV78_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08415 NZ_CP100136.1 GeneMarkS-2+ CDS 1802796 1802918 . - 0 ID=cds-WP_254985780.1;Parent=gene-NIV78_RS08415;Dbxref=Genbank:WP_254985780.1;Name=WP_254985780.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS08415;product=hypothetical protein;protein_id=WP_254985780.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1803842 1804660 . + . ID=gene-NIV78_RS08420;Name=NIV78_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08420 NZ_CP100136.1 Protein Homology CDS 1803842 1804660 . + 0 ID=cds-WP_015875802.1;Parent=gene-NIV78_RS08420;Dbxref=Genbank:WP_015875802.1;Name=WP_015875802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875802.1;locus_tag=NIV78_RS08420;product=TIM barrel protein;protein_id=WP_015875802.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1804681 1806426 . + . ID=gene-NIV78_RS08425;Name=NIV78_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08425 NZ_CP100136.1 Protein Homology CDS 1804681 1806426 . + 0 ID=cds-WP_017922678.1;Parent=gene-NIV78_RS08425;Dbxref=Genbank:WP_017922678.1;Name=WP_017922678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875801.1;locus_tag=NIV78_RS08425;product=FAD-dependent oxidoreductase;protein_id=WP_017922678.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1806699 1807532 . + . ID=gene-NIV78_RS08430;Name=NIV78_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08430 NZ_CP100136.1 Protein Homology CDS 1806699 1807532 . + 0 ID=cds-WP_015875800.1;Parent=gene-NIV78_RS08430;Dbxref=Genbank:WP_015875800.1;Name=WP_015875800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875800.1;locus_tag=NIV78_RS08430;product=aldo/keto reductase;protein_id=WP_015875800.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1808000 1809040 . + . ID=gene-NIV78_RS08435;Name=NIV78_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08435 NZ_CP100136.1 GeneMarkS-2+ CDS 1808000 1809040 . + 0 ID=cds-WP_257757374.1;Parent=gene-NIV78_RS08435;Dbxref=Genbank:WP_257757374.1;Name=WP_257757374.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS08435;product=hypothetical protein;protein_id=WP_257757374.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1809372 1809548 . - . ID=gene-NIV78_RS08440;Name=NIV78_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08440 NZ_CP100136.1 Protein Homology CDS 1809372 1809548 . - 0 ID=cds-WP_015875798.1;Parent=gene-NIV78_RS08440;Dbxref=Genbank:WP_015875798.1;Name=WP_015875798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698042.1;locus_tag=NIV78_RS08440;product=DUF1328 domain-containing protein;protein_id=WP_015875798.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1809935 1810492 . + . ID=gene-NIV78_RS08445;Name=NIV78_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08445 NZ_CP100136.1 Protein Homology CDS 1809935 1810492 . + 0 ID=cds-WP_015875797.1;Parent=gene-NIV78_RS08445;Dbxref=Genbank:WP_015875797.1;Name=WP_015875797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875797.1;locus_tag=NIV78_RS08445;product=lipocalin family protein;protein_id=WP_015875797.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1810602 1811429 . + . ID=gene-NIV78_RS08450;Name=NIV78_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08450 NZ_CP100136.1 Protein Homology CDS 1810602 1811429 . + 0 ID=cds-WP_232734500.1;Parent=gene-NIV78_RS08450;Dbxref=Genbank:WP_232734500.1;Name=WP_232734500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690819.1;locus_tag=NIV78_RS08450;product=alpha/beta hydrolase;protein_id=WP_232734500.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1811496 1812347 . - . ID=gene-NIV78_RS08455;Name=NIV78_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08455 NZ_CP100136.1 Protein Homology CDS 1811496 1812347 . - 0 ID=cds-WP_017923915.1;Parent=gene-NIV78_RS08455;Dbxref=Genbank:WP_017923915.1;Name=WP_017923915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024176.1;locus_tag=NIV78_RS08455;product=carbohydrate ABC transporter permease;protein_id=WP_017923915.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1812370 1813362 . - . ID=gene-NIV78_RS08460;Name=NIV78_RS08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08460 NZ_CP100136.1 Protein Homology CDS 1812370 1813362 . - 0 ID=cds-WP_251107419.1;Parent=gene-NIV78_RS08460;Dbxref=Genbank:WP_251107419.1;Name=WP_251107419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689454.1;locus_tag=NIV78_RS08460;product=ABC transporter permease subunit;protein_id=WP_251107419.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1813474 1814727 . - . ID=gene-NIV78_RS08465;Name=NIV78_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08465 NZ_CP100136.1 Protein Homology CDS 1813474 1814727 . - 0 ID=cds-WP_015875793.1;Parent=gene-NIV78_RS08465;Dbxref=Genbank:WP_015875793.1;Name=WP_015875793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013092145.1;locus_tag=NIV78_RS08465;product=extracellular solute-binding protein;protein_id=WP_015875793.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1814810 1816813 . - . ID=gene-NIV78_RS08470;Name=NIV78_RS08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08470 NZ_CP100136.1 Protein Homology CDS 1814810 1816813 . - 0 ID=cds-WP_015875792.1;Parent=gene-NIV78_RS08470;Dbxref=Genbank:WP_015875792.1;Name=WP_015875792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013590606.1;locus_tag=NIV78_RS08470;product=beta-galactosidase;protein_id=WP_015875792.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1816908 1818065 . - . ID=gene-NIV78_RS08475;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=NIV78_RS08475 NZ_CP100136.1 Protein Homology CDS 1816908 1818065 . - 0 ID=cds-WP_017425246.1;Parent=gene-NIV78_RS08475;Dbxref=Genbank:WP_017425246.1;Name=WP_017425246.1;Ontology_term=GO:0005524,GO:0140359;gbkey=CDS;gene=ugpC;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425246.1;locus_tag=NIV78_RS08475;product=sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC;protein_id=WP_017425246.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1818249 1819295 . + . ID=gene-NIV78_RS08480;Name=NIV78_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08480 NZ_CP100136.1 Protein Homology CDS 1818249 1819295 . + 0 ID=cds-WP_015875790.1;Parent=gene-NIV78_RS08480;Dbxref=Genbank:WP_015875790.1;Name=WP_015875790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017772962.1;locus_tag=NIV78_RS08480;product=LacI family transcriptional regulator;protein_id=WP_015875790.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1819413 1819610 . + . ID=gene-NIV78_RS08485;Name=NIV78_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08485 NZ_CP100136.1 Protein Homology CDS 1819413 1819610 . + 0 ID=cds-WP_015875789.1;Parent=gene-NIV78_RS08485;Dbxref=Genbank:WP_015875789.1;Name=WP_015875789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875789.1;locus_tag=NIV78_RS08485;product=ribbon-helix-helix domain-containing protein;protein_id=WP_015875789.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1819636 1820472 . - . ID=gene-NIV78_RS08490;Name=NIV78_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08490 NZ_CP100136.1 Protein Homology CDS 1819636 1820472 . - 0 ID=cds-WP_015875788.1;Parent=gene-NIV78_RS08490;Dbxref=Genbank:WP_015875788.1;Name=WP_015875788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875788.1;locus_tag=NIV78_RS08490;product=fused MFS/spermidine synthase;protein_id=WP_015875788.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1820500 1820844 . - . ID=gene-NIV78_RS08495;Name=NIV78_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08495 NZ_CP100136.1 Protein Homology CDS 1820500 1820844 . - 0 ID=cds-WP_015875787.1;Parent=gene-NIV78_RS08495;Dbxref=Genbank:WP_015875787.1;Name=WP_015875787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875787.1;locus_tag=NIV78_RS08495;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_015875787.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1821055 1821312 . + . ID=gene-NIV78_RS08500;Name=NIV78_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08500 NZ_CP100136.1 Protein Homology CDS 1821055 1821312 . + 0 ID=cds-WP_017433257.1;Parent=gene-NIV78_RS08500;Dbxref=Genbank:WP_017433257.1;Name=WP_017433257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017433257.1;locus_tag=NIV78_RS08500;product=hypothetical protein;protein_id=WP_017433257.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 1821380 1821608 . - . ID=gene-NIV78_RS08505;Name=NIV78_RS08505;end_range=1821608,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS08505;partial=true;pseudo=true;start_range=.,1821380 NZ_CP100136.1 Protein Homology CDS 1821380 1821608 . - 0 ID=cds-NIV78_RS08505;Parent=gene-NIV78_RS08505;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1821608,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004534912.1;locus_tag=NIV78_RS08505;partial=true;product=phosphoesterase;pseudo=true;start_range=.,1821380;transl_table=11 NZ_CP100136.1 RefSeq gene 1821974 1823149 . + . ID=gene-NIV78_RS08510;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=NIV78_RS08510 NZ_CP100136.1 Protein Homology CDS 1821974 1823149 . + 0 ID=cds-WP_232734499.1;Parent=gene-NIV78_RS08510;Dbxref=Genbank:WP_232734499.1;Name=WP_232734499.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875786.1;locus_tag=NIV78_RS08510;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_232734499.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1823209 1823862 . - . ID=gene-NIV78_RS08515;Name=NIV78_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08515 NZ_CP100136.1 Protein Homology CDS 1823209 1823862 . - 0 ID=cds-WP_015875785.1;Parent=gene-NIV78_RS08515;Dbxref=Genbank:WP_015875785.1;Name=WP_015875785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875785.1;locus_tag=NIV78_RS08515;product=nitroreductase family protein;protein_id=WP_015875785.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 1824225 1825714 . - . ID=gene-NIV78_RS08520;Name=NIV78_RS08520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS08520;pseudo=true NZ_CP100136.1 Protein Homology CDS 1824225 1825714 . - 0 ID=cds-NIV78_RS08520;Parent=gene-NIV78_RS08520;Note=frameshifted;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012406170.1;locus_tag=NIV78_RS08520;product=efflux transporter outer membrane subunit;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 1825692 1826777 . - . ID=gene-NIV78_RS08525;Name=NIV78_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08525 NZ_CP100136.1 Protein Homology CDS 1825692 1826777 . - 0 ID=cds-WP_017424144.1;Parent=gene-NIV78_RS08525;Dbxref=Genbank:WP_017424144.1;Name=WP_017424144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698092.1;locus_tag=NIV78_RS08525;product=biotin/lipoyl-binding protein;protein_id=WP_017424144.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 1826774 1827477 . - . ID=gene-NIV78_RS08530;Name=NIV78_RS08530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS08530;pseudo=true NZ_CP100136.1 Protein Homology CDS 1826774 1827477 . - 0 ID=cds-NIV78_RS08530;Parent=gene-NIV78_RS08530;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698093.1;locus_tag=NIV78_RS08530;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 1827474 1828610 . - . ID=gene-NIV78_RS08535;Name=NIV78_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08535 NZ_CP100136.1 Protein Homology CDS 1827474 1828610 . - 0 ID=cds-WP_017424145.1;Parent=gene-NIV78_RS08535;Dbxref=Genbank:WP_017424145.1;Name=WP_017424145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424145.1;locus_tag=NIV78_RS08535;product=ABC transporter permease;protein_id=WP_017424145.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1828636 1828824 . - . ID=gene-NIV78_RS08540;Name=NIV78_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08540 NZ_CP100136.1 Protein Homology CDS 1828636 1828824 . - 0 ID=cds-WP_017424146.1;Parent=gene-NIV78_RS08540;Dbxref=Genbank:WP_017424146.1;Name=WP_017424146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698095.1;locus_tag=NIV78_RS08540;product=DUF2964 family protein;protein_id=WP_017424146.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1829564 1829998 . + . ID=gene-NIV78_RS08545;Name=NIV78_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08545 NZ_CP100136.1 Protein Homology CDS 1829564 1829998 . + 0 ID=cds-WP_017424147.1;Parent=gene-NIV78_RS08545;Dbxref=Genbank:WP_017424147.1;Name=WP_017424147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424147.1;locus_tag=NIV78_RS08545;product=hypothetical protein;protein_id=WP_017424147.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 1830076 1830575 . - . ID=gene-NIV78_RS08550;Name=NIV78_RS08550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS08550;partial=true;pseudo=true;start_range=.,1830076 NZ_CP100136.1 Protein Homology CDS 1830076 1830575 . - 0 ID=cds-NIV78_RS08550;Parent=gene-NIV78_RS08550;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014191341.1;locus_tag=NIV78_RS08550;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,1830076;transl_table=11 NZ_CP100136.1 RefSeq gene 1830773 1832239 . - . ID=gene-NIV78_RS08555;Name=NIV78_RS08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08555 NZ_CP100136.1 Protein Homology CDS 1830773 1832239 . - 0 ID=cds-WP_198292469.1;Parent=gene-NIV78_RS08555;Dbxref=Genbank:WP_198292469.1;Name=WP_198292469.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763800.1;locus_tag=NIV78_RS08555;product=ISNCY family transposase;protein_id=WP_198292469.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1832637 1833704 . - . ID=gene-NIV78_RS08560;Name=NIV78_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08560 NZ_CP100136.1 Protein Homology CDS 1832637 1833704 . - 0 ID=cds-WP_017424148.1;Parent=gene-NIV78_RS08560;Dbxref=Genbank:WP_017424148.1;Name=WP_017424148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424148.1;locus_tag=NIV78_RS08560;product=alpha/beta fold hydrolase;protein_id=WP_017424148.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1833812 1834735 . + . ID=gene-NIV78_RS08565;Name=NIV78_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08565 NZ_CP100136.1 Protein Homology CDS 1833812 1834735 . + 0 ID=cds-WP_015875717.1;Parent=gene-NIV78_RS08565;Dbxref=Genbank:WP_015875717.1;Name=WP_015875717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424149.1;locus_tag=NIV78_RS08565;product=LysR substrate-binding domain-containing protein;protein_id=WP_015875717.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1834885 1836132 . + . ID=gene-NIV78_RS08570;Name=NIV78_RS08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08570 NZ_CP100136.1 Protein Homology CDS 1834885 1836132 . + 0 ID=cds-WP_015875716.1;Parent=gene-NIV78_RS08570;Dbxref=Genbank:WP_015875716.1;Name=WP_015875716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335629.1;locus_tag=NIV78_RS08570;product=ABC transporter substrate-binding protein;protein_id=WP_015875716.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1836144 1836887 . + . ID=gene-NIV78_RS08575;Name=NIV78_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08575 NZ_CP100136.1 Protein Homology CDS 1836144 1836887 . + 0 ID=cds-WP_232734497.1;Parent=gene-NIV78_RS08575;Dbxref=Genbank:WP_232734497.1;Name=WP_232734497.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875715.1;locus_tag=NIV78_RS08575;product=ATP-binding cassette domain-containing protein;protein_id=WP_232734497.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1836889 1837803 . + . ID=gene-NIV78_RS08580;Name=NIV78_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08580 NZ_CP100136.1 Protein Homology CDS 1836889 1837803 . + 0 ID=cds-WP_251107417.1;Parent=gene-NIV78_RS08580;Dbxref=Genbank:WP_251107417.1;Name=WP_251107417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875714.1;locus_tag=NIV78_RS08580;product=branched-chain amino acid ABC transporter permease;protein_id=WP_251107417.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1837800 1838789 . + . ID=gene-NIV78_RS08585;Name=NIV78_RS08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08585 NZ_CP100136.1 Protein Homology CDS 1837800 1838789 . + 0 ID=cds-WP_100555619.1;Parent=gene-NIV78_RS08585;Dbxref=Genbank:WP_100555619.1;Name=WP_100555619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875713.1;locus_tag=NIV78_RS08585;product=branched-chain amino acid ABC transporter permease;protein_id=WP_100555619.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1838786 1839208 . + . ID=gene-NIV78_RS08590;Name=NIV78_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08590 NZ_CP100136.1 Protein Homology CDS 1838786 1839208 . + 0 ID=cds-WP_045678911.1;Parent=gene-NIV78_RS08590;Dbxref=Genbank:WP_045678911.1;Name=WP_045678911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335625.1;locus_tag=NIV78_RS08590;product=FixH family protein;protein_id=WP_045678911.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1839432 1840667 . + . ID=gene-NIV78_RS08595;Name=NIV78_RS08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08595 NZ_CP100136.1 Protein Homology CDS 1839432 1840667 . + 0 ID=cds-WP_100555618.1;Parent=gene-NIV78_RS08595;Dbxref=Genbank:WP_100555618.1;Name=WP_100555618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875712.1;locus_tag=NIV78_RS08595;product=MFS transporter;protein_id=WP_100555618.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1840664 1840891 . + . ID=gene-NIV78_RS08600;Name=NIV78_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08600 NZ_CP100136.1 GeneMarkS-2+ CDS 1840664 1840891 . + 0 ID=cds-WP_100555617.1;Parent=gene-NIV78_RS08600;Dbxref=Genbank:WP_100555617.1;Name=WP_100555617.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS08600;product=hypothetical protein;protein_id=WP_100555617.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1840903 1841565 . + . ID=gene-NIV78_RS08605;Name=NIV78_RS08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08605 NZ_CP100136.1 Protein Homology CDS 1840903 1841565 . + 0 ID=cds-WP_251107416.1;Parent=gene-NIV78_RS08605;Dbxref=Genbank:WP_251107416.1;Name=WP_251107416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008906432.1;locus_tag=NIV78_RS08605;product=hypothetical protein;protein_id=WP_251107416.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1841532 1842308 . - . ID=gene-NIV78_RS08610;Name=NIV78_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08610 NZ_CP100136.1 Protein Homology CDS 1841532 1842308 . - 0 ID=cds-WP_017924529.1;Parent=gene-NIV78_RS08610;Dbxref=Genbank:WP_017924529.1;Name=WP_017924529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013393972.1;locus_tag=NIV78_RS08610;product=ferredoxin--NADP reductase;protein_id=WP_017924529.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1842365 1843291 . - . ID=gene-NIV78_RS08615;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=NIV78_RS08615 NZ_CP100136.1 Protein Homology CDS 1842365 1843291 . - 0 ID=cds-WP_017924528.1;Parent=gene-NIV78_RS08615;Dbxref=Genbank:WP_017924528.1;Name=WP_017924528.1;Ontology_term=GO:0009152,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875710.1;locus_tag=NIV78_RS08615;product=formyltetrahydrofolate deformylase;protein_id=WP_017924528.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1843363 1844133 . - . ID=gene-NIV78_RS08620;Name=NIV78_RS08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08620 NZ_CP100136.1 Protein Homology CDS 1843363 1844133 . - 0 ID=cds-WP_100555614.1;Parent=gene-NIV78_RS08620;Dbxref=Genbank:WP_100555614.1;Name=WP_100555614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335616.1;locus_tag=NIV78_RS08620;product=hypothetical protein;protein_id=WP_100555614.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1844130 1844423 . - . ID=gene-NIV78_RS08625;Name=NIV78_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08625 NZ_CP100136.1 Protein Homology CDS 1844130 1844423 . - 0 ID=cds-WP_017925028.1;Parent=gene-NIV78_RS08625;Dbxref=Genbank:WP_017925028.1;Name=WP_017925028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010098114.1;locus_tag=NIV78_RS08625;product=phosphopantetheine-binding protein;protein_id=WP_017925028.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1844468 1844965 . - . ID=gene-NIV78_RS08630;Name=NIV78_RS08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08630 NZ_CP100136.1 Protein Homology CDS 1844468 1844965 . - 0 ID=cds-WP_015875709.1;Parent=gene-NIV78_RS08630;Dbxref=Genbank:WP_015875709.1;Name=WP_015875709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335614.1;locus_tag=NIV78_RS08630;product=beta-hydroxyacyl-ACP dehydratase;protein_id=WP_015875709.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1844962 1845408 . - . ID=gene-NIV78_RS08635;Name=NIV78_RS08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08635 NZ_CP100136.1 Protein Homology CDS 1844962 1845408 . - 0 ID=cds-WP_015875708.1;Parent=gene-NIV78_RS08635;Dbxref=Genbank:WP_015875708.1;Name=WP_015875708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335613.1;locus_tag=NIV78_RS08635;product=acyl-CoA thioesterase;protein_id=WP_015875708.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1845473 1846213 . - . ID=gene-NIV78_RS08640;Name=NIV78_RS08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08640 NZ_CP100136.1 Protein Homology CDS 1845473 1846213 . - 0 ID=cds-WP_015875707.1;Parent=gene-NIV78_RS08640;Dbxref=Genbank:WP_015875707.1;Name=WP_015875707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335612.1;locus_tag=NIV78_RS08640;product=SDR family oxidoreductase;protein_id=WP_015875707.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1846210 1847379 . - . ID=gene-NIV78_RS08645;Name=NIV78_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08645 NZ_CP100136.1 Protein Homology CDS 1846210 1847379 . - 0 ID=cds-WP_015875706.1;Parent=gene-NIV78_RS08645;Dbxref=Genbank:WP_015875706.1;Name=WP_015875706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335611.1;locus_tag=NIV78_RS08645;product=acyl-CoA dehydrogenase family protein;protein_id=WP_015875706.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1847411 1848328 . - . ID=gene-NIV78_RS08650;Name=NIV78_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08650 NZ_CP100136.1 Protein Homology CDS 1847411 1848328 . - 0 ID=cds-WP_015875705.1;Parent=gene-NIV78_RS08650;Dbxref=Genbank:WP_015875705.1;Name=WP_015875705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010095729.1;locus_tag=NIV78_RS08650;product=diiron oxygenase;protein_id=WP_015875705.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1848431 1849147 . - . ID=gene-NIV78_RS08655;Name=NIV78_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08655 NZ_CP100136.1 Protein Homology CDS 1848431 1849147 . - 0 ID=cds-WP_015875704.1;Parent=gene-NIV78_RS08655;Dbxref=Genbank:WP_015875704.1;Name=WP_015875704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875704.1;locus_tag=NIV78_RS08655;product=iron-containing redox enzyme family protein;protein_id=WP_015875704.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1849154 1850203 . - . ID=gene-NIV78_RS08660;Name=NIV78_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08660 NZ_CP100136.1 Protein Homology CDS 1849154 1850203 . - 0 ID=cds-WP_153477571.1;Parent=gene-NIV78_RS08660;Dbxref=Genbank:WP_153477571.1;Name=WP_153477571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875703.1;locus_tag=NIV78_RS08660;product=alpha/beta hydrolase;protein_id=WP_153477571.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1850200 1851153 . - . ID=gene-NIV78_RS08665;Name=NIV78_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08665 NZ_CP100136.1 Protein Homology CDS 1850200 1851153 . - 0 ID=cds-WP_100555608.1;Parent=gene-NIV78_RS08665;Dbxref=Genbank:WP_100555608.1;Name=WP_100555608.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012337.2;locus_tag=NIV78_RS08665;product=hypothetical protein;protein_id=WP_100555608.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1851150 1852415 . - . ID=gene-NIV78_RS08670;Name=NIV78_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08670 NZ_CP100136.1 Protein Homology CDS 1851150 1852415 . - 0 ID=cds-WP_251107414.1;Parent=gene-NIV78_RS08670;Dbxref=Genbank:WP_251107414.1;Name=WP_251107414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875701.1;locus_tag=NIV78_RS08670;product=beta-ketoacyl synthase;protein_id=WP_251107414.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1852412 1852714 . - . ID=gene-NIV78_RS08675;Name=NIV78_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08675 NZ_CP100136.1 Protein Homology CDS 1852412 1852714 . - 0 ID=cds-WP_035979702.1;Parent=gene-NIV78_RS08675;Dbxref=Genbank:WP_035979702.1;Name=WP_035979702.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012759.2;locus_tag=NIV78_RS08675;product=phosphopantetheine-binding protein;protein_id=WP_035979702.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1852814 1854295 . - . ID=gene-NIV78_RS08680;Name=NIV78_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08680 NZ_CP100136.1 Protein Homology CDS 1852814 1854295 . - 0 ID=cds-WP_015875700.1;Parent=gene-NIV78_RS08680;Dbxref=Genbank:WP_015875700.1;Name=WP_015875700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335603.1;locus_tag=NIV78_RS08680;product=MFS transporter;protein_id=WP_015875700.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1854311 1854646 . - . ID=gene-NIV78_RS08685;Name=NIV78_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08685 NZ_CP100136.1 Protein Homology CDS 1854311 1854646 . - 0 ID=cds-WP_015875699.1;Parent=gene-NIV78_RS08685;Dbxref=Genbank:WP_015875699.1;Name=WP_015875699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875699.1;locus_tag=NIV78_RS08685;product=ferredoxin family protein;protein_id=WP_015875699.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1854773 1855885 . - . ID=gene-NIV78_RS08690;Name=NIV78_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08690 NZ_CP100136.1 Protein Homology CDS 1854773 1855885 . - 0 ID=cds-WP_015875698.1;Parent=gene-NIV78_RS08690;Dbxref=Genbank:WP_015875698.1;Name=WP_015875698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010096602.1;locus_tag=NIV78_RS08690;product=C45 family autoproteolytic acyltransferase/hydolase;protein_id=WP_015875698.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1855860 1856447 . - . ID=gene-NIV78_RS08695;Name=NIV78_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08695 NZ_CP100136.1 Protein Homology CDS 1855860 1856447 . - 0 ID=cds-WP_015875697.1;Parent=gene-NIV78_RS08695;Dbxref=Genbank:WP_015875697.1;Name=WP_015875697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335600.1;locus_tag=NIV78_RS08695;product=GNAT family N-acetyltransferase;protein_id=WP_015875697.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1856464 1856721 . - . ID=gene-NIV78_RS08700;Name=NIV78_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08700 NZ_CP100136.1 Protein Homology CDS 1856464 1856721 . - 0 ID=cds-WP_015875696.1;Parent=gene-NIV78_RS08700;Dbxref=Genbank:WP_015875696.1;Name=WP_015875696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875696.1;locus_tag=NIV78_RS08700;product=phosphopantetheine-binding protein;protein_id=WP_015875696.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1856718 1858277 . - . ID=gene-NIV78_RS08705;Name=NIV78_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08705 NZ_CP100136.1 Protein Homology CDS 1856718 1858277 . - 0 ID=cds-WP_015875695.1;Parent=gene-NIV78_RS08705;Dbxref=Genbank:WP_015875695.1;Name=WP_015875695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875695.1;locus_tag=NIV78_RS08705;product=AMP-binding protein;protein_id=WP_015875695.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1858277 1860142 . - . ID=gene-NIV78_RS08710;Name=NIV78_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08710 NZ_CP100136.1 Protein Homology CDS 1858277 1860142 . - 0 ID=cds-WP_015875694.1;Parent=gene-NIV78_RS08710;Dbxref=Genbank:WP_015875694.1;Name=WP_015875694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425340.1;locus_tag=NIV78_RS08710;product=hypothetical protein;protein_id=WP_015875694.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1860438 1861151 . - . ID=gene-NIV78_RS08715;Name=NIV78_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08715 NZ_CP100136.1 Protein Homology CDS 1860438 1861151 . - 0 ID=cds-WP_015875693.1;Parent=gene-NIV78_RS08715;Dbxref=Genbank:WP_015875693.1;Name=WP_015875693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532123.1;locus_tag=NIV78_RS08715;product=autoinducer binding domain-containing protein;protein_id=WP_015875693.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1861521 1861865 . + . ID=gene-NIV78_RS08720;Name=NIV78_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08720 NZ_CP100136.1 GeneMarkS-2+ CDS 1861521 1861865 . + 0 ID=cds-WP_157384143.1;Parent=gene-NIV78_RS08720;Dbxref=Genbank:WP_157384143.1;Name=WP_157384143.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS08720;product=hypothetical protein;protein_id=WP_157384143.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1862062 1862232 . - . ID=gene-NIV78_RS08725;Name=NIV78_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08725 NZ_CP100136.1 GeneMarkS-2+ CDS 1862062 1862232 . - 0 ID=cds-WP_153477561.1;Parent=gene-NIV78_RS08725;Dbxref=Genbank:WP_153477561.1;Name=WP_153477561.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS08725;product=hypothetical protein;protein_id=WP_153477561.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1862626 1863690 . + . ID=gene-NIV78_RS08730;Name=NIV78_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08730 NZ_CP100136.1 Protein Homology CDS 1862626 1863690 . + 0 ID=cds-WP_015875692.1;Parent=gene-NIV78_RS08730;Dbxref=Genbank:WP_015875692.1;Name=WP_015875692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425342.1;locus_tag=NIV78_RS08730;product=alpha/beta hydrolase;protein_id=WP_015875692.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1863775 1863981 . + . ID=gene-NIV78_RS08735;Name=NIV78_RS08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08735 NZ_CP100136.1 GeneMarkS-2+ CDS 1863775 1863981 . + 0 ID=cds-WP_017924448.1;Parent=gene-NIV78_RS08735;Dbxref=Genbank:WP_017924448.1;Name=WP_017924448.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS08735;product=hypothetical protein;protein_id=WP_017924448.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1864345 1865874 . + . ID=gene-NIV78_RS08740;Name=NIV78_RS08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08740 NZ_CP100136.1 Protein Homology CDS 1864345 1865874 . + 0 ID=cds-WP_100555606.1;Parent=gene-NIV78_RS08740;Dbxref=Genbank:WP_100555606.1;Name=WP_100555606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604139.1;locus_tag=NIV78_RS08740;product=S8 family peptidase;protein_id=WP_100555606.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1866013 1867635 . - . ID=gene-NIV78_RS08745;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=NIV78_RS08745 NZ_CP100136.1 Protein Homology CDS 1866013 1867635 . - 0 ID=cds-WP_100555605.1;Parent=gene-NIV78_RS08745;Dbxref=Genbank:WP_100555605.1;Name=WP_100555605.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=glycogen (starch) synthase activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875690.1;locus_tag=NIV78_RS08745;product=glycogen synthase GlgA;protein_id=WP_100555605.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1868745 1869401 . + . ID=gene-NIV78_RS08750;Name=NIV78_RS08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08750 NZ_CP100136.1 Protein Homology CDS 1868745 1869401 . + 0 ID=cds-WP_017424876.1;Parent=gene-NIV78_RS08750;Dbxref=Genbank:WP_017424876.1;Name=WP_017424876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424876.1;locus_tag=NIV78_RS08750;product=uracil-DNA glycosylase;protein_id=WP_017424876.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1869742 1870800 . + . ID=gene-NIV78_RS08755;Name=NIV78_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08755 NZ_CP100136.1 Protein Homology CDS 1869742 1870800 . + 0 ID=cds-WP_043228416.1;Parent=gene-NIV78_RS08755;Dbxref=Genbank:WP_043228416.1;Name=WP_043228416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875688.1;locus_tag=NIV78_RS08755;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_043228416.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1871207 1871956 . + . ID=gene-NIV78_RS08760;Name=NIV78_RS08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08760 NZ_CP100136.1 Protein Homology CDS 1871207 1871956 . + 0 ID=cds-WP_017924244.1;Parent=gene-NIV78_RS08760;Dbxref=Genbank:WP_017924244.1;Name=WP_017924244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698137.1;locus_tag=NIV78_RS08760;product=SDR family oxidoreductase;protein_id=WP_017924244.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1872237 1873772 . + . ID=gene-NIV78_RS08765;Name=NIV78_RS08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08765 NZ_CP100136.1 Protein Homology CDS 1872237 1873772 . + 0 ID=cds-WP_035979985.1;Parent=gene-NIV78_RS08765;Dbxref=Genbank:WP_035979985.1;Name=WP_035979985.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875686.1;locus_tag=NIV78_RS08765;product=MFS transporter;protein_id=WP_035979985.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1873925 1875001 . - . ID=gene-NIV78_RS08770;Name=NIV78_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08770 NZ_CP100136.1 Protein Homology CDS 1873925 1875001 . - 0 ID=cds-WP_251107412.1;Parent=gene-NIV78_RS08770;Dbxref=Genbank:WP_251107412.1;Name=WP_251107412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875685.1;locus_tag=NIV78_RS08770;product=asparaginase;protein_id=WP_251107412.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1875198 1876184 . + . ID=gene-NIV78_RS08775;Name=NIV78_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08775 NZ_CP100136.1 Protein Homology CDS 1875198 1876184 . + 0 ID=cds-WP_015875684.1;Parent=gene-NIV78_RS08775;Dbxref=Genbank:WP_015875684.1;Name=WP_015875684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016354601.1;locus_tag=NIV78_RS08775;product=diacylglycerol kinase;protein_id=WP_015875684.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1876181 1877014 . + . ID=gene-NIV78_RS08780;Name=NIV78_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08780 NZ_CP100136.1 Protein Homology CDS 1876181 1877014 . + 0 ID=cds-WP_015875683.1;Parent=gene-NIV78_RS08780;Dbxref=Genbank:WP_015875683.1;Name=WP_015875683.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875683.1;locus_tag=NIV78_RS08780;product=metallophosphoesterase;protein_id=WP_015875683.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1877152 1877823 . + . ID=gene-NIV78_RS08785;Name=NIV78_RS08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08785 NZ_CP100136.1 Protein Homology CDS 1877152 1877823 . + 0 ID=cds-WP_015875682.1;Parent=gene-NIV78_RS08785;Dbxref=Genbank:WP_015875682.1;Name=WP_015875682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875682.1;locus_tag=NIV78_RS08785;product=TetR/AcrR family transcriptional regulator;protein_id=WP_015875682.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1877845 1878831 . + . ID=gene-NIV78_RS08790;Name=NIV78_RS08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08790 NZ_CP100136.1 Protein Homology CDS 1877845 1878831 . + 0 ID=cds-WP_015875681.1;Parent=gene-NIV78_RS08790;Dbxref=Genbank:WP_015875681.1;Name=WP_015875681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875681.1;locus_tag=NIV78_RS08790;product=oxidoreductase;protein_id=WP_015875681.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1878926 1880284 . - . ID=gene-NIV78_RS08795;Name=NIV78_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08795 NZ_CP100136.1 Protein Homology CDS 1878926 1880284 . - 0 ID=cds-WP_100555602.1;Parent=gene-NIV78_RS08795;Dbxref=Genbank:WP_100555602.1;Name=WP_100555602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875680.1;locus_tag=NIV78_RS08795;product=virulence factor family protein;protein_id=WP_100555602.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1880281 1882863 . - . ID=gene-NIV78_RS08800;Name=mprF;gbkey=Gene;gene=mprF;gene_biotype=protein_coding;locus_tag=NIV78_RS08800 NZ_CP100136.1 Protein Homology CDS 1880281 1882863 . - 0 ID=cds-WP_017923794.1;Parent=gene-NIV78_RS08800;Dbxref=Genbank:WP_017923794.1;Name=WP_017923794.1;gbkey=CDS;gene=mprF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875679.1;locus_tag=NIV78_RS08800;product=bifunctional lysylphosphatidylglycerol flippase/synthetase MprF;protein_id=WP_017923794.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1883359 1884177 . - . ID=gene-NIV78_RS08805;Name=NIV78_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08805 NZ_CP100136.1 Protein Homology CDS 1883359 1884177 . - 0 ID=cds-WP_015875678.1;Parent=gene-NIV78_RS08805;Dbxref=Genbank:WP_015875678.1;Name=WP_015875678.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875678.1;locus_tag=NIV78_RS08805;product=FkbM family methyltransferase;protein_id=WP_015875678.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1885041 1887476 . + . ID=gene-NIV78_RS08810;Name=NIV78_RS08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08810 NZ_CP100136.1 Protein Homology CDS 1885041 1887476 . + 0 ID=cds-WP_017924053.1;Parent=gene-NIV78_RS08810;Dbxref=Genbank:WP_017924053.1;Name=WP_017924053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875677.1;locus_tag=NIV78_RS08810;product=DUF3772 domain-containing protein;protein_id=WP_017924053.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1887631 1887933 . + . ID=gene-NIV78_RS08815;Name=NIV78_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08815 NZ_CP100136.1 Protein Homology CDS 1887631 1887933 . + 0 ID=cds-WP_017924054.1;Parent=gene-NIV78_RS08815;Dbxref=Genbank:WP_017924054.1;Name=WP_017924054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875676.1;locus_tag=NIV78_RS08815;product=hypothetical protein;protein_id=WP_017924054.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1888066 1888371 . + . ID=gene-NIV78_RS08820;Name=NIV78_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08820 NZ_CP100136.1 Protein Homology CDS 1888066 1888371 . + 0 ID=cds-WP_100555601.1;Parent=gene-NIV78_RS08820;Dbxref=Genbank:WP_100555601.1;Name=WP_100555601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351967.1;locus_tag=NIV78_RS08820;product=hypothetical protein;protein_id=WP_100555601.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1888436 1888894 . - . ID=gene-NIV78_RS08825;Name=NIV78_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08825 NZ_CP100136.1 Protein Homology CDS 1888436 1888894 . - 0 ID=cds-WP_017924154.1;Parent=gene-NIV78_RS08825;Dbxref=Genbank:WP_017924154.1;Name=WP_017924154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875674.1;locus_tag=NIV78_RS08825;product=hypothetical protein;protein_id=WP_017924154.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1889103 1889390 . + . ID=gene-NIV78_RS08830;Name=NIV78_RS08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08830 NZ_CP100136.1 Protein Homology CDS 1889103 1889390 . + 0 ID=cds-WP_015875673.1;Parent=gene-NIV78_RS08830;Dbxref=Genbank:WP_015875673.1;Name=WP_015875673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875673.1;locus_tag=NIV78_RS08830;product=YciI-like protein;protein_id=WP_015875673.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1889415 1890392 . - . ID=gene-NIV78_RS08835;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=NIV78_RS08835 NZ_CP100136.1 Protein Homology CDS 1889415 1890392 . - 0 ID=cds-WP_015875672.1;Parent=gene-NIV78_RS08835;Dbxref=Genbank:WP_015875672.1;Name=WP_015875672.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095;gbkey=CDS;gene=corA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009909327.1;locus_tag=NIV78_RS08835;product=magnesium/cobalt transporter CorA;protein_id=WP_015875672.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1890622 1891236 . + . ID=gene-NIV78_RS08840;Name=NIV78_RS08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08840 NZ_CP100136.1 Protein Homology CDS 1890622 1891236 . + 0 ID=cds-WP_015875671.1;Parent=gene-NIV78_RS08840;Dbxref=Genbank:WP_015875671.1;Name=WP_015875671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004266847.1;locus_tag=NIV78_RS08840;product=ATP-binding protein;protein_id=WP_015875671.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1891343 1892443 . - . ID=gene-NIV78_RS08845;Name=NIV78_RS08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08845 NZ_CP100136.1 Protein Homology CDS 1891343 1892443 . - 0 ID=cds-WP_017424832.1;Parent=gene-NIV78_RS08845;Dbxref=Genbank:WP_017424832.1;Name=WP_017424832.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192972.1;locus_tag=NIV78_RS08845;product=saccharopine dehydrogenase NADP-binding domain-containing protein;protein_id=WP_017424832.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1892755 1893219 . - . ID=gene-NIV78_RS08850;Name=NIV78_RS08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08850 NZ_CP100136.1 Protein Homology CDS 1892755 1893219 . - 0 ID=cds-WP_015875669.1;Parent=gene-NIV78_RS08850;Dbxref=Genbank:WP_015875669.1;Name=WP_015875669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875669.1;locus_tag=NIV78_RS08850;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_015875669.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1893500 1894039 . + . ID=gene-NIV78_RS08855;Name=NIV78_RS08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08855 NZ_CP100136.1 Protein Homology CDS 1893500 1894039 . + 0 ID=cds-WP_017924137.1;Parent=gene-NIV78_RS08855;Dbxref=Genbank:WP_017924137.1;Name=WP_017924137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875668.1;locus_tag=NIV78_RS08855;product=Spy/CpxP family protein refolding chaperone;protein_id=WP_017924137.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1894247 1895077 . - . ID=gene-NIV78_RS08860;Name=NIV78_RS08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08860 NZ_CP100136.1 Protein Homology CDS 1894247 1895077 . - 0 ID=cds-WP_257756631.1;Parent=gene-NIV78_RS08860;Dbxref=Genbank:WP_257756631.1;Name=WP_257756631.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875667.1;locus_tag=NIV78_RS08860;product=IS6 family transposase;protein_id=WP_257756631.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1895117 1896673 . - . ID=gene-NIV78_RS08865;Name=NIV78_RS08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08865 NZ_CP100136.1 Protein Homology CDS 1895117 1896673 . - 0 ID=cds-WP_012732752.1-2;Parent=gene-NIV78_RS08865;Dbxref=Genbank:WP_012732752.1;Name=WP_012732752.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875269.1;locus_tag=NIV78_RS08865;product=IS66 family transposase;protein_id=WP_012732752.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1896705 1897055 . - . ID=gene-NIV78_RS08870;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=NIV78_RS08870 NZ_CP100136.1 Protein Homology CDS 1896705 1897055 . - 0 ID=cds-WP_012732753.1-2;Parent=gene-NIV78_RS08870;Dbxref=Genbank:WP_012732753.1;Name=WP_012732753.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: protein motif:HMM:NF017528.2;locus_tag=NIV78_RS08870;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_012732753.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1897031 1897507 . - . ID=gene-NIV78_RS08875;Name=NIV78_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08875 NZ_CP100136.1 Protein Homology CDS 1897031 1897507 . - 0 ID=cds-WP_012734051.1-2;Parent=gene-NIV78_RS08875;Dbxref=Genbank:WP_012734051.1;Name=WP_012734051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699891.1;locus_tag=NIV78_RS08875;product=transposase;protein_id=WP_012734051.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1898318 1898599 . - . ID=gene-NIV78_RS08880;Name=NIV78_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08880 NZ_CP100136.1 Protein Homology CDS 1898318 1898599 . - 0 ID=cds-WP_015875666.1;Parent=gene-NIV78_RS08880;Dbxref=Genbank:WP_015875666.1;Name=WP_015875666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875666.1;locus_tag=NIV78_RS08880;product=PAAR domain-containing protein;protein_id=WP_015875666.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1898663 1899466 . - . ID=gene-NIV78_RS08885;Name=NIV78_RS08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08885 NZ_CP100136.1 Protein Homology CDS 1898663 1899466 . - 0 ID=cds-WP_232252257.1;Parent=gene-NIV78_RS08885;Dbxref=Genbank:WP_232252257.1;Name=WP_232252257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020067799.1;locus_tag=NIV78_RS08885;product=hypothetical protein;protein_id=WP_232252257.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1899489 1900610 . - . ID=gene-NIV78_RS08890;Name=NIV78_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08890 NZ_CP100136.1 Protein Homology CDS 1899489 1900610 . - 0 ID=cds-WP_232252279.1;Parent=gene-NIV78_RS08890;Dbxref=Genbank:WP_232252279.1;Name=WP_232252279.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013700.2;locus_tag=NIV78_RS08890;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_232252279.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 1900722 1900850 . - . ID=gene-NIV78_RS08895;Name=NIV78_RS08895;end_range=1900850,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS08895;partial=true;pseudo=true;start_range=.,1900722 NZ_CP100136.1 Protein Homology CDS 1900722 1900850 . - 0 ID=cds-NIV78_RS08895;Parent=gene-NIV78_RS08895;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1900850,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003244816.1;locus_tag=NIV78_RS08895;partial=true;product=LysM peptidoglycan-binding domain-containing protein;pseudo=true;start_range=.,1900722;transl_table=11 NZ_CP100136.1 RefSeq gene 1901232 1903997 . - . ID=gene-NIV78_RS08900;Name=NIV78_RS08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08900 NZ_CP100136.1 Protein Homology CDS 1901232 1903997 . - 0 ID=cds-WP_017923434.1;Parent=gene-NIV78_RS08900;Dbxref=Genbank:WP_017923434.1;Name=WP_017923434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875663.1;locus_tag=NIV78_RS08900;product=type VI secretion system tip protein VgrG;protein_id=WP_017923434.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 1904373 1905077 . + . ID=gene-NIV78_RS08905;Name=NIV78_RS08905;end_range=1905077,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS08905;partial=true;pseudo=true NZ_CP100136.1 Protein Homology CDS 1904373 1905077 . + 0 ID=cds-NIV78_RS08905;Parent=gene-NIV78_RS08905;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=1905077,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007735675.1;locus_tag=NIV78_RS08905;partial=true;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 1905255 1905689 . + . ID=gene-NIV78_RS08910;Name=NIV78_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08910 NZ_CP100136.1 Protein Homology CDS 1905255 1905689 . + 0 ID=cds-WP_017924438.1;Parent=gene-NIV78_RS08910;Dbxref=Genbank:WP_017924438.1;Name=WP_017924438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875662.1;locus_tag=NIV78_RS08910;product=PGDYG domain-containing protein;protein_id=WP_017924438.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1905726 1906088 . - . ID=gene-NIV78_RS08915;Name=NIV78_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08915 NZ_CP100136.1 Protein Homology CDS 1905726 1906088 . - 0 ID=cds-WP_015875661.1;Parent=gene-NIV78_RS08915;Dbxref=Genbank:WP_015875661.1;Name=WP_015875661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884902.1;locus_tag=NIV78_RS08915;product=DUF3022 domain-containing protein;protein_id=WP_015875661.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1906108 1906896 . - . ID=gene-NIV78_RS08920;Name=NIV78_RS08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08920 NZ_CP100136.1 Protein Homology CDS 1906108 1906896 . - 0 ID=cds-WP_015875660.1;Parent=gene-NIV78_RS08920;Dbxref=Genbank:WP_015875660.1;Name=WP_015875660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875660.1;locus_tag=NIV78_RS08920;product=YhfC family glutamic-type intramembrane protease;protein_id=WP_015875660.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1906952 1907998 . - . ID=gene-NIV78_RS08925;Name=NIV78_RS08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08925 NZ_CP100136.1 Protein Homology CDS 1906952 1907998 . - 0 ID=cds-WP_124836852.1;Parent=gene-NIV78_RS08925;Dbxref=Genbank:WP_124836852.1;Name=WP_124836852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332130.1;locus_tag=NIV78_RS08925;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_124836852.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1908340 1909308 . - . ID=gene-NIV78_RS08930;Name=NIV78_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08930 NZ_CP100136.1 Protein Homology CDS 1908340 1909308 . - 0 ID=cds-WP_017924305.1;Parent=gene-NIV78_RS08930;Dbxref=Genbank:WP_017924305.1;Name=WP_017924305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875658.1;locus_tag=NIV78_RS08930;product=D-glycerate dehydrogenase;protein_id=WP_017924305.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1909314 1910591 . - . ID=gene-NIV78_RS08935;Name=NIV78_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08935 NZ_CP100136.1 Protein Homology CDS 1909314 1910591 . - 0 ID=cds-WP_017924306.1;Parent=gene-NIV78_RS08935;Dbxref=Genbank:WP_017924306.1;Name=WP_017924306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012761480.1;locus_tag=NIV78_RS08935;product=MFS transporter;protein_id=WP_017924306.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1910689 1911690 . - . ID=gene-NIV78_RS08940;Name=NIV78_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08940 NZ_CP100136.1 Protein Homology CDS 1910689 1911690 . - 0 ID=cds-WP_015875656.1;Parent=gene-NIV78_RS08940;Dbxref=Genbank:WP_015875656.1;Name=WP_015875656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698181.1;locus_tag=NIV78_RS08940;product=sugar kinase;protein_id=WP_015875656.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1911717 1912481 . - . ID=gene-NIV78_RS08945;Name=NIV78_RS08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08945 NZ_CP100136.1 Protein Homology CDS 1911717 1912481 . - 0 ID=cds-WP_169511846.1;Parent=gene-NIV78_RS08945;Dbxref=Genbank:WP_169511846.1;Name=WP_169511846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191656.1;locus_tag=NIV78_RS08945;product=TIM barrel protein;protein_id=WP_169511846.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1912682 1913593 . - . ID=gene-NIV78_RS08950;Name=NIV78_RS08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08950 NZ_CP100136.1 Protein Homology CDS 1912682 1913593 . - 0 ID=cds-WP_100555598.1;Parent=gene-NIV78_RS08950;Dbxref=Genbank:WP_100555598.1;Name=WP_100555598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875654.1;locus_tag=NIV78_RS08950;product=LysR family transcriptional regulator;protein_id=WP_100555598.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1913704 1914777 . + . ID=gene-NIV78_RS08955;Name=NIV78_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08955 NZ_CP100136.1 Protein Homology CDS 1913704 1914777 . + 0 ID=cds-WP_017424431.1;Parent=gene-NIV78_RS08955;Dbxref=Genbank:WP_017424431.1;Name=WP_017424431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424431.1;locus_tag=NIV78_RS08955;product=YeiH family protein;protein_id=WP_017424431.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1914878 1916611 . + . ID=gene-NIV78_RS08960;Name=NIV78_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08960 NZ_CP100136.1 Protein Homology CDS 1914878 1916611 . + 0 ID=cds-WP_015875652.1;Parent=gene-NIV78_RS08960;Dbxref=Genbank:WP_015875652.1;Name=WP_015875652.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467624.1;locus_tag=NIV78_RS08960;product=ClcB-like voltage-gated chloride channel protein;protein_id=WP_015875652.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1916750 1917370 . - . ID=gene-NIV78_RS08965;Name=NIV78_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08965 NZ_CP100136.1 Protein Homology CDS 1916750 1917370 . - 0 ID=cds-WP_015875651.1;Parent=gene-NIV78_RS08965;Dbxref=Genbank:WP_015875651.1;Name=WP_015875651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191264.1;locus_tag=NIV78_RS08965;product=TetR/AcrR family transcriptional regulator;protein_id=WP_015875651.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1917601 1918704 . + . ID=gene-NIV78_RS08970;Name=NIV78_RS08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08970 NZ_CP100136.1 Protein Homology CDS 1917601 1918704 . + 0 ID=cds-WP_015875650.1;Parent=gene-NIV78_RS08970;Dbxref=Genbank:WP_015875650.1;Name=WP_015875650.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328568.1;locus_tag=NIV78_RS08970;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_015875650.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1918701 1921859 . + . ID=gene-NIV78_RS08975;Name=NIV78_RS08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08975 NZ_CP100136.1 Protein Homology CDS 1918701 1921859 . + 0 ID=cds-WP_017923381.1;Parent=gene-NIV78_RS08975;Dbxref=Genbank:WP_017923381.1;Name=WP_017923381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875649.1;locus_tag=NIV78_RS08975;product=efflux RND transporter permease subunit;protein_id=WP_017923381.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1921862 1923415 . + . ID=gene-NIV78_RS08980;Name=NIV78_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08980 NZ_CP100136.1 Protein Homology CDS 1921862 1923415 . + 0 ID=cds-WP_015875648.1;Parent=gene-NIV78_RS08980;Dbxref=Genbank:WP_015875648.1;Name=WP_015875648.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851691.1;locus_tag=NIV78_RS08980;product=efflux transporter outer membrane subunit;protein_id=WP_015875648.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1923498 1924751 . - . ID=gene-NIV78_RS08985;Name=NIV78_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08985 NZ_CP100136.1 Protein Homology CDS 1923498 1924751 . - 0 ID=cds-WP_232252282.1;Parent=gene-NIV78_RS08985;Dbxref=Genbank:WP_232252282.1;Name=WP_232252282.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875647.1;locus_tag=NIV78_RS08985;product=sigma 54-interacting transcriptional regulator;protein_id=WP_232252282.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1925298 1926200 . + . ID=gene-NIV78_RS08990;Name=NIV78_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08990 NZ_CP100136.1 Protein Homology CDS 1925298 1926200 . + 0 ID=cds-WP_015875646.1;Parent=gene-NIV78_RS08990;Dbxref=Genbank:WP_015875646.1;Name=WP_015875646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328577.1;locus_tag=NIV78_RS08990;product=MBL fold metallo-hydrolase;protein_id=WP_015875646.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1926287 1927573 . + . ID=gene-NIV78_RS08995;Name=NIV78_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS08995 NZ_CP100136.1 Protein Homology CDS 1926287 1927573 . + 0 ID=cds-WP_251118860.1;Parent=gene-NIV78_RS08995;Dbxref=Genbank:WP_251118860.1;Name=WP_251118860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896960.1;locus_tag=NIV78_RS08995;product=FAD-dependent oxidoreductase;protein_id=WP_251118860.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1927676 1928494 . - . ID=gene-NIV78_RS09000;Name=NIV78_RS09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09000 NZ_CP100136.1 Protein Homology CDS 1927676 1928494 . - 0 ID=cds-WP_015875644.1;Parent=gene-NIV78_RS09000;Dbxref=Genbank:WP_015875644.1;Name=WP_015875644.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193032.1;locus_tag=NIV78_RS09000;product=ABC transporter permease subunit;protein_id=WP_015875644.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1928491 1929420 . - . ID=gene-NIV78_RS09005;Name=NIV78_RS09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09005 NZ_CP100136.1 Protein Homology CDS 1928491 1929420 . - 0 ID=cds-WP_015875643.1;Parent=gene-NIV78_RS09005;Dbxref=Genbank:WP_015875643.1;Name=WP_015875643.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884922.1;locus_tag=NIV78_RS09005;product=ABC transporter permease subunit;protein_id=WP_015875643.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1929417 1930568 . - . ID=gene-NIV78_RS09010;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=NIV78_RS09010 NZ_CP100136.1 Protein Homology CDS 1929417 1930568 . - 0 ID=cds-WP_043225828.1;Parent=gene-NIV78_RS09010;Dbxref=Genbank:WP_043225828.1;Name=WP_043225828.1;Ontology_term=GO:0015846,GO:0005524,GO:0015417,GO:0009898,GO:0055052;gbkey=CDS;gene=potA;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010115150.1;locus_tag=NIV78_RS09010;product=polyamine ABC transporter ATP-binding protein;protein_id=WP_043225828.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1930710 1931804 . - . ID=gene-NIV78_RS09015;Name=NIV78_RS09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09015 NZ_CP100136.1 Protein Homology CDS 1930710 1931804 . - 0 ID=cds-WP_015875641.1;Parent=gene-NIV78_RS09015;Dbxref=Genbank:WP_015875641.1;Name=WP_015875641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004266745.1;locus_tag=NIV78_RS09015;product=polyamine ABC transporter substrate-binding protein;protein_id=WP_015875641.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1932309 1933598 . + . ID=gene-NIV78_RS09020;Name=NIV78_RS09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09020 NZ_CP100136.1 Protein Homology CDS 1932309 1933598 . + 0 ID=cds-WP_015875640.1;Parent=gene-NIV78_RS09020;Dbxref=Genbank:WP_015875640.1;Name=WP_015875640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423897.1;locus_tag=NIV78_RS09020;product=phospholipase A;protein_id=WP_015875640.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1933645 1933848 . + . ID=gene-NIV78_RS09025;Name=NIV78_RS09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09025 NZ_CP100136.1 Protein Homology CDS 1933645 1933848 . + 0 ID=cds-WP_015875639.1;Parent=gene-NIV78_RS09025;Dbxref=Genbank:WP_015875639.1;Name=WP_015875639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009973325.1;locus_tag=NIV78_RS09025;product=DUF1289 domain-containing protein;protein_id=WP_015875639.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1933974 1934615 . - . ID=gene-NIV78_RS09030;Name=NIV78_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09030 NZ_CP100136.1 Protein Homology CDS 1933974 1934615 . - 0 ID=cds-WP_015875638.1;Parent=gene-NIV78_RS09030;Dbxref=Genbank:WP_015875638.1;Name=WP_015875638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328582.1;locus_tag=NIV78_RS09030;product=outer membrane beta-barrel protein;protein_id=WP_015875638.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1934681 1935871 . - . ID=gene-NIV78_RS09035;Name=NIV78_RS09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09035 NZ_CP100136.1 Protein Homology CDS 1934681 1935871 . - 0 ID=cds-WP_015875637.1;Parent=gene-NIV78_RS09035;Dbxref=Genbank:WP_015875637.1;Name=WP_015875637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363959.1;locus_tag=NIV78_RS09035;product=nitronate monooxygenase family protein;protein_id=WP_015875637.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1936114 1937706 . - . ID=gene-NIV78_RS09040;Name=NIV78_RS09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09040 NZ_CP100136.1 Protein Homology CDS 1936114 1937706 . - 0 ID=cds-WP_015875636.1;Parent=gene-NIV78_RS09040;Dbxref=Genbank:WP_015875636.1;Name=WP_015875636.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875636.1;locus_tag=NIV78_RS09040;product=ABC-F family ATPase;protein_id=WP_015875636.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1937877 1940144 . - . ID=gene-NIV78_RS09045;Name=NIV78_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09045 NZ_CP100136.1 Protein Homology CDS 1937877 1940144 . - 0 ID=cds-WP_100555594.1;Parent=gene-NIV78_RS09045;Dbxref=Genbank:WP_100555594.1;Name=WP_100555594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875635.1;locus_tag=NIV78_RS09045;product=AsmA family protein;protein_id=WP_100555594.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1940273 1941013 . + . ID=gene-NIV78_RS09050;Name=NIV78_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09050 NZ_CP100136.1 Protein Homology CDS 1940273 1941013 . + 0 ID=cds-WP_153477536.1;Parent=gene-NIV78_RS09050;Dbxref=Genbank:WP_153477536.1;Name=WP_153477536.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875634.1;locus_tag=NIV78_RS09050;product=ATP-binding cassette domain-containing protein;protein_id=WP_153477536.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1941010 1941828 . + . ID=gene-NIV78_RS09055;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=NIV78_RS09055 NZ_CP100136.1 Protein Homology CDS 1941010 1941828 . + 0 ID=cds-WP_124836859.1;Parent=gene-NIV78_RS09055;Dbxref=Genbank:WP_124836859.1;Name=WP_124836859.1;gbkey=CDS;gene=fetB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875633.1;locus_tag=NIV78_RS09055;product=iron export ABC transporter permease subunit FetB;protein_id=WP_124836859.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1941920 1942465 . - . ID=gene-NIV78_RS09060;Name=NIV78_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09060 NZ_CP100136.1 Protein Homology CDS 1941920 1942465 . - 0 ID=cds-WP_251107407.1;Parent=gene-NIV78_RS09060;Dbxref=Genbank:WP_251107407.1;Name=WP_251107407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875632.1;locus_tag=NIV78_RS09060;product=DUF6013 family protein;protein_id=WP_251107407.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1942897 1943913 . - . ID=gene-NIV78_RS09065;Name=NIV78_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09065 NZ_CP100136.1 Protein Homology CDS 1942897 1943913 . - 0 ID=cds-WP_015875631.1;Parent=gene-NIV78_RS09065;Dbxref=Genbank:WP_015875631.1;Name=WP_015875631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497183.1;locus_tag=NIV78_RS09065;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_015875631.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1944026 1945030 . + . ID=gene-NIV78_RS09070;Name=NIV78_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09070 NZ_CP100136.1 Protein Homology CDS 1944026 1945030 . + 0 ID=cds-WP_257756635.1;Parent=gene-NIV78_RS09070;Dbxref=Genbank:WP_257756635.1;Name=WP_257756635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875630.1;locus_tag=NIV78_RS09070;product=LysR family transcriptional regulator;protein_id=WP_257756635.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1945112 1945957 . + . ID=gene-NIV78_RS09075;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=NIV78_RS09075 NZ_CP100136.1 Protein Homology CDS 1945112 1945957 . + 0 ID=cds-WP_017924059.1;Parent=gene-NIV78_RS09075;Dbxref=Genbank:WP_017924059.1;Name=WP_017924059.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026934.1;locus_tag=NIV78_RS09075;product=phosphoserine phosphatase SerB;protein_id=WP_017924059.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1946116 1947297 . - . ID=gene-NIV78_RS09080;Name=NIV78_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09080 NZ_CP100136.1 Protein Homology CDS 1946116 1947297 . - 0 ID=cds-WP_017924723.1;Parent=gene-NIV78_RS09080;Dbxref=Genbank:WP_017924723.1;Name=WP_017924723.1;Ontology_term=GO:0019346,GO:0004121;gbkey=CDS;go_function=cystathionine beta-lyase activity|0004121||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010103299.1;locus_tag=NIV78_RS09080;product=cystathionine beta-lyase;protein_id=WP_017924723.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1947503 1948120 . - . ID=gene-NIV78_RS09085;Name=NIV78_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09085 NZ_CP100136.1 Protein Homology CDS 1947503 1948120 . - 0 ID=cds-WP_015875627.1;Parent=gene-NIV78_RS09085;Dbxref=Genbank:WP_015875627.1;Name=WP_015875627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698218.1;locus_tag=NIV78_RS09085;product=hypothetical protein;protein_id=WP_015875627.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1948175 1949359 . - . ID=gene-NIV78_RS09090;Name=NIV78_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09090 NZ_CP100136.1 Protein Homology CDS 1948175 1949359 . - 0 ID=cds-WP_017924633.1;Parent=gene-NIV78_RS09090;Dbxref=Genbank:WP_017924633.1;Name=WP_017924633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521353.1;locus_tag=NIV78_RS09090;product=acetyl-CoA C-acyltransferase family protein;protein_id=WP_017924633.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1949485 1950435 . - . ID=gene-NIV78_RS09095;Name=NIV78_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09095 NZ_CP100136.1 Protein Homology CDS 1949485 1950435 . - 0 ID=cds-WP_257756636.1;Parent=gene-NIV78_RS09095;Dbxref=Genbank:WP_257756636.1;Name=WP_257756636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875625.1;locus_tag=NIV78_RS09095;product=sugar kinase;protein_id=WP_257756636.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1950432 1951814 . - . ID=gene-NIV78_RS09100;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=NIV78_RS09100 NZ_CP100136.1 Protein Homology CDS 1950432 1951814 . - 0 ID=cds-WP_015875624.1;Parent=gene-NIV78_RS09100;Dbxref=Genbank:WP_015875624.1;Name=WP_015875624.1;Ontology_term=GO:0018339,GO:0008172,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=rimO;go_function=S-methyltransferase activity|0008172||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424266.1;locus_tag=NIV78_RS09100;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_015875624.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1951828 1953468 . + . ID=gene-NIV78_RS09105;Name=NIV78_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09105 NZ_CP100136.1 Protein Homology CDS 1951828 1953468 . + 0 ID=cds-WP_257756638.1;Parent=gene-NIV78_RS09105;Dbxref=Genbank:WP_257756638.1;Name=WP_257756638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875623.1;locus_tag=NIV78_RS09105;product=recombinase family protein;protein_id=WP_257756638.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1953859 1954608 . + . ID=gene-NIV78_RS09110;Name=NIV78_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09110 NZ_CP100136.1 GeneMarkS-2+ CDS 1953859 1954608 . + 0 ID=cds-WP_257756639.1;Parent=gene-NIV78_RS09110;Dbxref=Genbank:WP_257756639.1;Name=WP_257756639.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS09110;product=hypothetical protein;protein_id=WP_257756639.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1954652 1955218 . + . ID=gene-NIV78_RS09115;Name=NIV78_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09115 NZ_CP100136.1 GeneMarkS-2+ CDS 1954652 1955218 . + 0 ID=cds-WP_257756641.1;Parent=gene-NIV78_RS09115;Dbxref=Genbank:WP_257756641.1;Name=WP_257756641.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS09115;product=hypothetical protein;protein_id=WP_257756641.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 1955225 1955800 . - . ID=gene-NIV78_RS09120;Name=NIV78_RS09120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS09120;pseudo=true NZ_CP100136.1 Protein Homology CDS 1955225 1955800 . - 0 ID=cds-NIV78_RS09120;Parent=gene-NIV78_RS09120;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009941414.1;locus_tag=NIV78_RS09120;product=SOS response-associated peptidase;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 1955848 1956072 . + . ID=gene-NIV78_RS09125;Name=NIV78_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09125 NZ_CP100136.1 GeneMarkS-2+ CDS 1955848 1956072 . + 0 ID=cds-WP_257756643.1;Parent=gene-NIV78_RS09125;Dbxref=Genbank:WP_257756643.1;Name=WP_257756643.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS09125;product=hypothetical protein;protein_id=WP_257756643.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1956056 1956661 . - . ID=gene-NIV78_RS09130;Name=NIV78_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09130 NZ_CP100136.1 Protein Homology CDS 1956056 1956661 . - 0 ID=cds-WP_257756645.1;Parent=gene-NIV78_RS09130;Dbxref=Genbank:WP_257756645.1;Name=WP_257756645.1;Ontology_term=GO:0009058;gbkey=CDS;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881866.1;locus_tag=NIV78_RS09130;product=thioesterase domain-containing protein;protein_id=WP_257756645.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1956658 1957122 . - . ID=gene-NIV78_RS09135;Name=NIV78_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09135 NZ_CP100136.1 Protein Homology CDS 1956658 1957122 . - 0 ID=cds-WP_257756647.1;Parent=gene-NIV78_RS09135;Dbxref=Genbank:WP_257756647.1;Name=WP_257756647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876015.1;locus_tag=NIV78_RS09135;product=hypothetical protein;protein_id=WP_257756647.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1957193 1957564 . - . ID=gene-NIV78_RS09140;Name=NIV78_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09140 NZ_CP100136.1 Protein Homology CDS 1957193 1957564 . - 0 ID=cds-WP_257756649.1;Parent=gene-NIV78_RS09140;Dbxref=Genbank:WP_257756649.1;Name=WP_257756649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875620.1;locus_tag=NIV78_RS09140;product=hypothetical protein;protein_id=WP_257756649.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1957568 1958092 . - . ID=gene-NIV78_RS09145;Name=NIV78_RS09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09145 NZ_CP100136.1 Protein Homology CDS 1957568 1958092 . - 0 ID=cds-WP_251118895.1;Parent=gene-NIV78_RS09145;Dbxref=Genbank:WP_251118895.1;Name=WP_251118895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020748928.1;locus_tag=NIV78_RS09145;product=hypothetical protein;protein_id=WP_251118895.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1958224 1959267 . + . ID=gene-NIV78_RS09150;Name=NIV78_RS09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09150 NZ_CP100136.1 Protein Homology CDS 1958224 1959267 . + 0 ID=cds-WP_257739410.1;Parent=gene-NIV78_RS09150;Dbxref=Genbank:WP_257739410.1;Name=WP_257739410.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025574.2;locus_tag=NIV78_RS09150;product=DUF4325 domain-containing protein;protein_id=WP_257739410.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1959288 1959854 . - . ID=gene-NIV78_RS09155;Name=NIV78_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09155 NZ_CP100136.1 Protein Homology CDS 1959288 1959854 . - 0 ID=cds-WP_257744612.1;Parent=gene-NIV78_RS09155;Dbxref=Genbank:WP_257744612.1;Name=WP_257744612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875617.1;locus_tag=NIV78_RS09155;product=lysozyme;protein_id=WP_257744612.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1959860 1960243 . - . ID=gene-NIV78_RS09160;Name=NIV78_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09160 NZ_CP100136.1 Protein Homology CDS 1959860 1960243 . - 0 ID=cds-WP_257744611.1;Parent=gene-NIV78_RS09160;Dbxref=Genbank:WP_257744611.1;Name=WP_257744611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875616.1;locus_tag=NIV78_RS09160;product=hypothetical protein;protein_id=WP_257744611.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1960501 1961277 . + . ID=gene-NIV78_RS09165;Name=NIV78_RS09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09165 NZ_CP100136.1 Protein Homology CDS 1960501 1961277 . + 0 ID=cds-WP_257744610.1;Parent=gene-NIV78_RS09165;Dbxref=Genbank:WP_257744610.1;Name=WP_257744610.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024863.2;locus_tag=NIV78_RS09165;product=SGNH/GDSL hydrolase family protein;protein_id=WP_257744610.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 1961380 1961619 . - . ID=gene-NIV78_RS09170;Name=NIV78_RS09170;end_range=1961619,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS09170;partial=true;pseudo=true NZ_CP100136.1 Protein Homology CDS 1961380 1961619 . - 0 ID=cds-NIV78_RS09170;Parent=gene-NIV78_RS09170;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1961619,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS09170;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 1961720 1961914 . - . ID=gene-NIV78_RS09175;Name=NIV78_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09175 NZ_CP100136.1 GeneMarkS-2+ CDS 1961720 1961914 . - 0 ID=cds-WP_257744609.1;Parent=gene-NIV78_RS09175;Dbxref=Genbank:WP_257744609.1;Name=WP_257744609.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS09175;product=hypothetical protein;protein_id=WP_257744609.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1961919 1963436 . - . ID=gene-NIV78_RS09180;Name=NIV78_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09180 NZ_CP100136.1 GeneMarkS-2+ CDS 1961919 1963436 . - 0 ID=cds-WP_257744608.1;Parent=gene-NIV78_RS09180;Dbxref=Genbank:WP_257744608.1;Name=WP_257744608.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS09180;product=hypothetical protein;protein_id=WP_257744608.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1963500 1964162 . - . ID=gene-NIV78_RS09185;Name=NIV78_RS09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09185 NZ_CP100136.1 Protein Homology CDS 1963500 1964162 . - 0 ID=cds-WP_257744607.1;Parent=gene-NIV78_RS09185;Dbxref=Genbank:WP_257744607.1;Name=WP_257744607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027832.1;locus_tag=NIV78_RS09185;product=DUF2612 domain-containing protein;protein_id=WP_257744607.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1964162 1965349 . - . ID=gene-NIV78_RS09190;Name=NIV78_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09190 NZ_CP100136.1 Protein Homology CDS 1964162 1965349 . - 0 ID=cds-WP_257744606.1;Parent=gene-NIV78_RS09190;Dbxref=Genbank:WP_257744606.1;Name=WP_257744606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006393821.1;locus_tag=NIV78_RS09190;product=baseplate J/gp47 family protein;protein_id=WP_257744606.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1965346 1965699 . - . ID=gene-NIV78_RS09195;Name=NIV78_RS09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09195 NZ_CP100136.1 Protein Homology CDS 1965346 1965699 . - 0 ID=cds-WP_257744605.1;Parent=gene-NIV78_RS09195;Dbxref=Genbank:WP_257744605.1;Name=WP_257744605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010111173.1;locus_tag=NIV78_RS09195;product=hypothetical protein;protein_id=WP_257744605.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1965760 1966545 . - . ID=gene-NIV78_RS09200;Name=NIV78_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09200 NZ_CP100136.1 Protein Homology CDS 1965760 1966545 . - 0 ID=cds-WP_257756651.1;Parent=gene-NIV78_RS09200;Dbxref=Genbank:WP_257756651.1;Name=WP_257756651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467598.1;locus_tag=NIV78_RS09200;product=hypothetical protein;protein_id=WP_257756651.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1966558 1967004 . + . ID=gene-NIV78_RS09205;Name=NIV78_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09205 NZ_CP100136.1 GeneMarkS-2+ CDS 1966558 1967004 . + 0 ID=cds-WP_257744603.1;Parent=gene-NIV78_RS09205;Dbxref=Genbank:WP_257744603.1;Name=WP_257744603.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS09205;product=hypothetical protein;protein_id=WP_257744603.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1967001 1967996 . - . ID=gene-NIV78_RS09210;Name=NIV78_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09210 NZ_CP100136.1 Protein Homology CDS 1967001 1967996 . - 0 ID=cds-WP_257744602.1;Parent=gene-NIV78_RS09210;Dbxref=Genbank:WP_257744602.1;Name=WP_257744602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875609.1;locus_tag=NIV78_RS09210;product=hypothetical protein;protein_id=WP_257744602.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1967993 1968313 . - . ID=gene-NIV78_RS09215;Name=NIV78_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09215 NZ_CP100136.1 Protein Homology CDS 1967993 1968313 . - 0 ID=cds-WP_257744601.1;Parent=gene-NIV78_RS09215;Dbxref=Genbank:WP_257744601.1;Name=WP_257744601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013205586.1;locus_tag=NIV78_RS09215;product=hypothetical protein;protein_id=WP_257744601.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1968321 1968914 . - . ID=gene-NIV78_RS09220;Name=NIV78_RS09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09220 NZ_CP100136.1 Protein Homology CDS 1968321 1968914 . - 0 ID=cds-WP_257744600.1;Parent=gene-NIV78_RS09220;Dbxref=Genbank:WP_257744600.1;Name=WP_257744600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875606.1;locus_tag=NIV78_RS09220;product=hypothetical protein;protein_id=WP_257744600.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1968911 1970848 . - . ID=gene-NIV78_RS09225;Name=NIV78_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09225 NZ_CP100136.1 Protein Homology CDS 1968911 1970848 . - 0 ID=cds-WP_257756653.1;Parent=gene-NIV78_RS09225;Dbxref=Genbank:WP_257756653.1;Name=WP_257756653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875605.1;locus_tag=NIV78_RS09225;product=glucosaminidase;protein_id=WP_257756653.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1970841 1970972 . - . ID=gene-NIV78_RS09230;Name=NIV78_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09230 NZ_CP100136.1 Protein Homology CDS 1970841 1970972 . - 0 ID=cds-WP_257756655.1;Parent=gene-NIV78_RS09230;Dbxref=Genbank:WP_257756655.1;Name=WP_257756655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005880788.1;locus_tag=NIV78_RS09230;product=hypothetical protein;protein_id=WP_257756655.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1971023 1971475 . - . ID=gene-NIV78_RS09235;Name=NIV78_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09235 NZ_CP100136.1 Protein Homology CDS 1971023 1971475 . - 0 ID=cds-WP_257756657.1;Parent=gene-NIV78_RS09235;Dbxref=Genbank:WP_257756657.1;Name=WP_257756657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875603.1;locus_tag=NIV78_RS09235;product=hypothetical protein;protein_id=WP_257756657.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1971553 1972101 . + . ID=gene-NIV78_RS09240;Name=NIV78_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09240 NZ_CP100136.1 Protein Homology CDS 1971553 1972101 . + 0 ID=cds-WP_015875602.1;Parent=gene-NIV78_RS09240;Dbxref=Genbank:WP_015875602.1;Name=WP_015875602.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024784.2;locus_tag=NIV78_RS09240;product=HNH endonuclease;protein_id=WP_015875602.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1972098 1972541 . - . ID=gene-NIV78_RS09245;Name=NIV78_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09245 NZ_CP100136.1 Protein Homology CDS 1972098 1972541 . - 0 ID=cds-WP_257756659.1;Parent=gene-NIV78_RS09245;Dbxref=Genbank:WP_257756659.1;Name=WP_257756659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213513.1;locus_tag=NIV78_RS09245;product=DUF3277 family protein;protein_id=WP_257756659.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1972540 1972968 . + . ID=gene-NIV78_RS09250;Name=NIV78_RS09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09250 NZ_CP100136.1 GeneMarkS-2+ CDS 1972540 1972968 . + 0 ID=cds-WP_257756660.1;Parent=gene-NIV78_RS09250;Dbxref=Genbank:WP_257756660.1;Name=WP_257756660.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS09250;product=hypothetical protein;protein_id=WP_257756660.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1973082 1974893 . - . ID=gene-NIV78_RS09255;Name=NIV78_RS09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09255 NZ_CP100136.1 Protein Homology CDS 1973082 1974893 . - 0 ID=cds-WP_257756661.1;Parent=gene-NIV78_RS09255;Dbxref=Genbank:WP_257756661.1;Name=WP_257756661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488916.1;locus_tag=NIV78_RS09255;product=DUF3383 family protein;protein_id=WP_257756661.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1974903 1975493 . - . ID=gene-NIV78_RS09260;Name=NIV78_RS09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09260 NZ_CP100136.1 Protein Homology CDS 1974903 1975493 . - 0 ID=cds-WP_257756663.1;Parent=gene-NIV78_RS09260;Dbxref=Genbank:WP_257756663.1;Name=WP_257756663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488819.1;locus_tag=NIV78_RS09260;product=hypothetical protein;protein_id=WP_257756663.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1975490 1975873 . - . ID=gene-NIV78_RS09265;Name=NIV78_RS09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09265 NZ_CP100136.1 Protein Homology CDS 1975490 1975873 . - 0 ID=cds-WP_015875598.1;Parent=gene-NIV78_RS09265;Dbxref=Genbank:WP_015875598.1;Name=WP_015875598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875598.1;locus_tag=NIV78_RS09265;product=hypothetical protein;protein_id=WP_015875598.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1975935 1976522 . - . ID=gene-NIV78_RS09270;Name=NIV78_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09270 NZ_CP100136.1 Protein Homology CDS 1975935 1976522 . - 0 ID=cds-WP_257756665.1;Parent=gene-NIV78_RS09270;Dbxref=Genbank:WP_257756665.1;Name=WP_257756665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875597.1;locus_tag=NIV78_RS09270;product=hypothetical protein;protein_id=WP_257756665.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1976548 1976931 . - . ID=gene-NIV78_RS09275;Name=NIV78_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09275 NZ_CP100136.1 Protein Homology CDS 1976548 1976931 . - 0 ID=cds-WP_015875596.1;Parent=gene-NIV78_RS09275;Dbxref=Genbank:WP_015875596.1;Name=WP_015875596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424285.1;locus_tag=NIV78_RS09275;product=DUF4054 domain-containing protein;protein_id=WP_015875596.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1976993 1977451 . - . ID=gene-NIV78_RS09280;Name=NIV78_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09280 NZ_CP100136.1 Protein Homology CDS 1976993 1977451 . - 0 ID=cds-WP_015875595.1;Parent=gene-NIV78_RS09280;Dbxref=Genbank:WP_015875595.1;Name=WP_015875595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424286.1;locus_tag=NIV78_RS09280;product=hypothetical protein;protein_id=WP_015875595.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1977453 1978553 . - . ID=gene-NIV78_RS09285;Name=NIV78_RS09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09285 NZ_CP100136.1 Protein Homology CDS 1977453 1978553 . - 0 ID=cds-WP_015875594.1;Parent=gene-NIV78_RS09285;Dbxref=Genbank:WP_015875594.1;Name=WP_015875594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424287.1;locus_tag=NIV78_RS09285;product=DUF2184 domain-containing protein;protein_id=WP_015875594.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1978628 1979143 . - . ID=gene-NIV78_RS09290;Name=NIV78_RS09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09290 NZ_CP100136.1 Protein Homology CDS 1978628 1979143 . - 0 ID=cds-WP_015875593.1;Parent=gene-NIV78_RS09290;Dbxref=Genbank:WP_015875593.1;Name=WP_015875593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875593.1;locus_tag=NIV78_RS09290;product=hypothetical protein;protein_id=WP_015875593.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1979153 1980616 . - . ID=gene-NIV78_RS09295;Name=NIV78_RS09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09295 NZ_CP100136.1 Protein Homology CDS 1979153 1980616 . - 0 ID=cds-WP_257756667.1;Parent=gene-NIV78_RS09295;Dbxref=Genbank:WP_257756667.1;Name=WP_257756667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875592.1;locus_tag=NIV78_RS09295;product=DUF2213 domain-containing protein;protein_id=WP_257756667.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1980769 1981299 . - . ID=gene-NIV78_RS09300;Name=NIV78_RS09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09300 NZ_CP100136.1 Protein Homology CDS 1980769 1981299 . - 0 ID=cds-WP_257757399.1;Parent=gene-NIV78_RS09300;Dbxref=Genbank:WP_257757399.1;Name=WP_257757399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875591.1;locus_tag=NIV78_RS09300;product=hypothetical protein;protein_id=WP_257757399.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1981299 1982051 . - . ID=gene-NIV78_RS09305;Name=NIV78_RS09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09305 NZ_CP100136.1 Protein Homology CDS 1981299 1982051 . - 0 ID=cds-WP_015875590.1;Parent=gene-NIV78_RS09305;Dbxref=Genbank:WP_015875590.1;Name=WP_015875590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424291.1;locus_tag=NIV78_RS09305;product=phage minor head protein;protein_id=WP_015875590.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1982048 1983523 . - . ID=gene-NIV78_RS09310;Name=NIV78_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09310 NZ_CP100136.1 Protein Homology CDS 1982048 1983523 . - 0 ID=cds-WP_257756669.1;Parent=gene-NIV78_RS09310;Dbxref=Genbank:WP_257756669.1;Name=WP_257756669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875589.1;locus_tag=NIV78_RS09310;product=DUF1073 domain-containing protein;protein_id=WP_257756669.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1983520 1985115 . - . ID=gene-NIV78_RS09315;Name=NIV78_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09315 NZ_CP100136.1 Protein Homology CDS 1983520 1985115 . - 0 ID=cds-WP_257756670.1;Parent=gene-NIV78_RS09315;Dbxref=Genbank:WP_257756670.1;Name=WP_257756670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875588.1;locus_tag=NIV78_RS09315;product=TerL protein;protein_id=WP_257756670.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1985117 1985596 . - . ID=gene-NIV78_RS09320;Name=NIV78_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09320 NZ_CP100136.1 Protein Homology CDS 1985117 1985596 . - 0 ID=cds-WP_015875587.1;Parent=gene-NIV78_RS09320;Dbxref=Genbank:WP_015875587.1;Name=WP_015875587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027856.1;locus_tag=NIV78_RS09320;product=DUF2280 domain-containing protein;protein_id=WP_015875587.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1985627 1986127 . - . ID=gene-NIV78_RS09325;Name=NIV78_RS09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09325 NZ_CP100136.1 Protein Homology CDS 1985627 1986127 . - 0 ID=cds-WP_015875586.1;Parent=gene-NIV78_RS09325;Dbxref=Genbank:WP_015875586.1;Name=WP_015875586.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019106.2;locus_tag=NIV78_RS09325;product=HNH endonuclease;protein_id=WP_015875586.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1986124 1986780 . - . ID=gene-NIV78_RS09330;Name=NIV78_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09330 NZ_CP100136.1 Protein Homology CDS 1986124 1986780 . - 0 ID=cds-WP_257756672.1;Parent=gene-NIV78_RS09330;Dbxref=Genbank:WP_257756672.1;Name=WP_257756672.1;Ontology_term=GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875585.1;locus_tag=NIV78_RS09330;product=putative metallopeptidase;protein_id=WP_257756672.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1986792 1987055 . - . ID=gene-NIV78_RS09335;Name=NIV78_RS09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09335 NZ_CP100136.1 GeneMarkS-2+ CDS 1986792 1987055 . - 0 ID=cds-WP_017424296.1;Parent=gene-NIV78_RS09335;Dbxref=Genbank:WP_017424296.1;Name=WP_017424296.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS09335;product=hypothetical protein;protein_id=WP_017424296.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1987197 1987802 . - . ID=gene-NIV78_RS09340;Name=NIV78_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09340 NZ_CP100136.1 Protein Homology CDS 1987197 1987802 . - 0 ID=cds-WP_100555585.1;Parent=gene-NIV78_RS09340;Dbxref=Genbank:WP_100555585.1;Name=WP_100555585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875584.1;locus_tag=NIV78_RS09340;product=DNA-binding protein;protein_id=WP_100555585.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1987799 1988128 . - . ID=gene-NIV78_RS09345;Name=NIV78_RS09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09345 NZ_CP100136.1 Protein Homology CDS 1987799 1988128 . - 0 ID=cds-WP_257756674.1;Parent=gene-NIV78_RS09345;Dbxref=Genbank:WP_257756674.1;Name=WP_257756674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875583.1;locus_tag=NIV78_RS09345;product=hypothetical protein;protein_id=WP_257756674.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1988138 1988608 . - . ID=gene-NIV78_RS09350;Name=NIV78_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09350 NZ_CP100136.1 Protein Homology CDS 1988138 1988608 . - 0 ID=cds-WP_015875582.1;Parent=gene-NIV78_RS09350;Dbxref=Genbank:WP_015875582.1;Name=WP_015875582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764411.1;locus_tag=NIV78_RS09350;product=RusA family crossover junction endodeoxyribonuclease;protein_id=WP_015875582.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1988605 1988781 . - . ID=gene-NIV78_RS09355;Name=NIV78_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09355 NZ_CP100136.1 Protein Homology CDS 1988605 1988781 . - 0 ID=cds-WP_017424298.1;Parent=gene-NIV78_RS09355;Dbxref=Genbank:WP_017424298.1;Name=WP_017424298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027862.1;locus_tag=NIV78_RS09355;product=hypothetical protein;protein_id=WP_017424298.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1988775 1988954 . - . ID=gene-NIV78_RS09360;Name=NIV78_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09360 NZ_CP100136.1 GeneMarkS-2+ CDS 1988775 1988954 . - 0 ID=cds-WP_257756675.1;Parent=gene-NIV78_RS09360;Dbxref=Genbank:WP_257756675.1;Name=WP_257756675.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS09360;product=hypothetical protein;protein_id=WP_257756675.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1988951 1990066 . - . ID=gene-NIV78_RS09365;Name=NIV78_RS09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09365 NZ_CP100136.1 Protein Homology CDS 1988951 1990066 . - 0 ID=cds-WP_257756677.1;Parent=gene-NIV78_RS09365;Dbxref=Genbank:WP_257756677.1;Name=WP_257756677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424300.1;locus_tag=NIV78_RS09365;product=YdaU family protein;protein_id=WP_257756677.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1990063 1991037 . - . ID=gene-NIV78_RS09370;Name=NIV78_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09370 NZ_CP100136.1 Protein Homology CDS 1990063 1991037 . - 0 ID=cds-WP_257756678.1;Parent=gene-NIV78_RS09370;Dbxref=Genbank:WP_257756678.1;Name=WP_257756678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015984976.1;locus_tag=NIV78_RS09370;product=phosphoadenosine phosphosulfate reductase family protein;protein_id=WP_257756678.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1991034 1992266 . - . ID=gene-NIV78_RS09375;Name=NIV78_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09375 NZ_CP100136.1 Protein Homology CDS 1991034 1992266 . - 0 ID=cds-WP_257756680.1;Parent=gene-NIV78_RS09375;Dbxref=Genbank:WP_257756680.1;Name=WP_257756680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013802074.1;locus_tag=NIV78_RS09375;product=site-specific DNA-methyltransferase;protein_id=WP_257756680.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1992263 1993138 . - . ID=gene-NIV78_RS09380;Name=NIV78_RS09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09380 NZ_CP100136.1 Protein Homology CDS 1992263 1993138 . - 0 ID=cds-WP_257756681.1;Parent=gene-NIV78_RS09380;Dbxref=Genbank:WP_257756681.1;Name=WP_257756681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009916892.1;locus_tag=NIV78_RS09380;product=hypothetical protein;protein_id=WP_257756681.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1993135 1995000 . - . ID=gene-NIV78_RS09385;Name=NIV78_RS09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09385 NZ_CP100136.1 Protein Homology CDS 1993135 1995000 . - 0 ID=cds-WP_252836692.1;Parent=gene-NIV78_RS09385;Dbxref=Genbank:WP_252836692.1;Name=WP_252836692.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424303.1;locus_tag=NIV78_RS09385;product=DNA cytosine methyltransferase;protein_id=WP_252836692.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1995167 1995394 . - . ID=gene-NIV78_RS09390;Name=NIV78_RS09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09390 NZ_CP100136.1 Protein Homology CDS 1995167 1995394 . - 0 ID=cds-WP_124836032.1;Parent=gene-NIV78_RS09390;Dbxref=Genbank:WP_124836032.1;Name=WP_124836032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875576.1;locus_tag=NIV78_RS09390;product=hypothetical protein;protein_id=WP_124836032.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1995391 1995765 . - . ID=gene-NIV78_RS09395;Name=NIV78_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09395 NZ_CP100136.1 Protein Homology CDS 1995391 1995765 . - 0 ID=cds-WP_124836033.1;Parent=gene-NIV78_RS09395;Dbxref=Genbank:WP_124836033.1;Name=WP_124836033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213534.1;locus_tag=NIV78_RS09395;product=hypothetical protein;protein_id=WP_124836033.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1995932 1996219 . + . ID=gene-NIV78_RS09400;Name=NIV78_RS09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09400 NZ_CP100136.1 GeneMarkS-2+ CDS 1995932 1996219 . + 0 ID=cds-WP_124836034.1;Parent=gene-NIV78_RS09400;Dbxref=Genbank:WP_124836034.1;Name=WP_124836034.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS09400;product=hypothetical protein;protein_id=WP_124836034.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1996257 1996418 . - . ID=gene-NIV78_RS09405;Name=NIV78_RS09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09405 NZ_CP100136.1 GeneMarkS-2+ CDS 1996257 1996418 . - 0 ID=cds-WP_185731567.1;Parent=gene-NIV78_RS09405;Dbxref=Genbank:WP_185731567.1;Name=WP_185731567.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS09405;product=hypothetical protein;protein_id=WP_185731567.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1996568 1997092 . + . ID=gene-NIV78_RS09410;Name=NIV78_RS09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09410 NZ_CP100136.1 Protein Homology CDS 1996568 1997092 . + 0 ID=cds-WP_230674345.1;Parent=gene-NIV78_RS09410;Dbxref=Genbank:WP_230674345.1;Name=WP_230674345.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024252.2;locus_tag=NIV78_RS09410;product=helix-turn-helix domain-containing protein;protein_id=WP_230674345.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1997996 1998202 . + . ID=gene-NIV78_RS09415;Name=NIV78_RS09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09415 NZ_CP100136.1 Protein Homology CDS 1997996 1998202 . + 0 ID=cds-WP_252836693.1;Parent=gene-NIV78_RS09415;Dbxref=Genbank:WP_252836693.1;Name=WP_252836693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424308.1;locus_tag=NIV78_RS09415;product=hypothetical protein;protein_id=WP_252836693.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1998381 1998692 . + . ID=gene-NIV78_RS09420;Name=NIV78_RS09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09420 NZ_CP100136.1 GeneMarkS-2+ CDS 1998381 1998692 . + 0 ID=cds-WP_257744578.1;Parent=gene-NIV78_RS09420;Dbxref=Genbank:WP_257744578.1;Name=WP_257744578.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS09420;product=hypothetical protein;protein_id=WP_257744578.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1998694 1999092 . + . ID=gene-NIV78_RS09425;Name=NIV78_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09425 NZ_CP100136.1 Protein Homology CDS 1998694 1999092 . + 0 ID=cds-WP_257756684.1;Parent=gene-NIV78_RS09425;Dbxref=Genbank:WP_257756684.1;Name=WP_257756684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875571.1;locus_tag=NIV78_RS09425;product=hypothetical protein;protein_id=WP_257756684.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1999094 1999231 . + . ID=gene-NIV78_RS09430;Name=NIV78_RS09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09430 NZ_CP100136.1 GeneMarkS-2+ CDS 1999094 1999231 . + 0 ID=cds-WP_153477471.1;Parent=gene-NIV78_RS09430;Dbxref=Genbank:WP_153477471.1;Name=WP_153477471.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS09430;product=hypothetical protein;protein_id=WP_153477471.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1999240 1999560 . + . ID=gene-NIV78_RS09435;Name=NIV78_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09435 NZ_CP100136.1 GeneMarkS-2+ CDS 1999240 1999560 . + 0 ID=cds-WP_039200824.1;Parent=gene-NIV78_RS09435;Dbxref=Genbank:WP_039200824.1;Name=WP_039200824.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS09435;product=hypothetical protein;protein_id=WP_039200824.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1999562 1999807 . + . ID=gene-NIV78_RS09440;Name=NIV78_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09440 NZ_CP100136.1 Protein Homology CDS 1999562 1999807 . + 0 ID=cds-WP_039200826.1;Parent=gene-NIV78_RS09440;Dbxref=Genbank:WP_039200826.1;Name=WP_039200826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424314.1;locus_tag=NIV78_RS09440;product=hypothetical protein;protein_id=WP_039200826.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1999807 1999983 . + . ID=gene-NIV78_RS09445;Name=NIV78_RS09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09445 NZ_CP100136.1 Protein Homology CDS 1999807 1999983 . + 0 ID=cds-WP_015875570.1;Parent=gene-NIV78_RS09445;Dbxref=Genbank:WP_015875570.1;Name=WP_015875570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875570.1;locus_tag=NIV78_RS09445;product=hypothetical protein;protein_id=WP_015875570.1;transl_table=11 NZ_CP100136.1 RefSeq gene 1999980 2000474 . + . ID=gene-NIV78_RS09450;Name=NIV78_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09450 NZ_CP100136.1 Protein Homology CDS 1999980 2000474 . + 0 ID=cds-WP_257756686.1;Parent=gene-NIV78_RS09450;Dbxref=Genbank:WP_257756686.1;Name=WP_257756686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875569.1;locus_tag=NIV78_RS09450;product=HNH endonuclease;protein_id=WP_257756686.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2000471 2000716 . + . ID=gene-NIV78_RS09455;Name=NIV78_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09455 NZ_CP100136.1 Protein Homology CDS 2000471 2000716 . + 0 ID=cds-WP_124836045.1;Parent=gene-NIV78_RS09455;Dbxref=Genbank:WP_124836045.1;Name=WP_124836045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875568.1;locus_tag=NIV78_RS09455;product=hypothetical protein;protein_id=WP_124836045.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2000741 2001058 . + . ID=gene-NIV78_RS09460;Name=NIV78_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09460 NZ_CP100136.1 Protein Homology CDS 2000741 2001058 . + 0 ID=cds-WP_015875567.1;Parent=gene-NIV78_RS09460;Dbxref=Genbank:WP_015875567.1;Name=WP_015875567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424317.1;locus_tag=NIV78_RS09460;product=KTSC domain-containing protein;protein_id=WP_015875567.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2001055 2001864 . + . ID=gene-NIV78_RS09465;Name=NIV78_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09465 NZ_CP100136.1 Protein Homology CDS 2001055 2001864 . + 0 ID=cds-WP_015875566.1;Parent=gene-NIV78_RS09465;Dbxref=Genbank:WP_015875566.1;Name=WP_015875566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764418.1;locus_tag=NIV78_RS09465;product=PD-(D/E)XK nuclease family protein;protein_id=WP_015875566.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2001878 2003059 . + . ID=gene-NIV78_RS09470;Name=NIV78_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09470 NZ_CP100136.1 Protein Homology CDS 2001878 2003059 . + 0 ID=cds-WP_257756687.1;Parent=gene-NIV78_RS09470;Dbxref=Genbank:WP_257756687.1;Name=WP_257756687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875565.1;locus_tag=NIV78_RS09470;product=hypothetical protein;protein_id=WP_257756687.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2003084 2003944 . + . ID=gene-NIV78_RS09475;Name=NIV78_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09475 NZ_CP100136.1 Protein Homology CDS 2003084 2003944 . + 0 ID=cds-WP_015875564.1;Parent=gene-NIV78_RS09475;Dbxref=Genbank:WP_015875564.1;Name=WP_015875564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875564.1;locus_tag=NIV78_RS09475;product=cell division protein FtsK;protein_id=WP_015875564.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2003941 2005710 . + . ID=gene-NIV78_RS09480;Name=NIV78_RS09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09480 NZ_CP100136.1 Protein Homology CDS 2003941 2005710 . + 0 ID=cds-WP_257756689.1;Parent=gene-NIV78_RS09480;Dbxref=Genbank:WP_257756689.1;Name=WP_257756689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027888.1;locus_tag=NIV78_RS09480;product=AAA family ATPase;protein_id=WP_257756689.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2005707 2006339 . + . ID=gene-NIV78_RS09485;Name=NIV78_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09485 NZ_CP100136.1 Protein Homology CDS 2005707 2006339 . + 0 ID=cds-WP_257756691.1;Parent=gene-NIV78_RS09485;Dbxref=Genbank:WP_257756691.1;Name=WP_257756691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875562.1;locus_tag=NIV78_RS09485;product=1-pyrroline-5-carboxylate dehydrogenase;protein_id=WP_257756691.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2006635 2007030 . + . ID=gene-NIV78_RS09490;Name=NIV78_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09490 NZ_CP100136.1 Protein Homology CDS 2006635 2007030 . + 0 ID=cds-WP_015875558.1;Parent=gene-NIV78_RS09490;Dbxref=Genbank:WP_015875558.1;Name=WP_015875558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011487590.1;locus_tag=NIV78_RS09490;product=hypothetical protein;protein_id=WP_015875558.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2007038 2009209 . + . ID=gene-NIV78_RS09495;Name=NIV78_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09495 NZ_CP100136.1 GeneMarkS-2+ CDS 2007038 2009209 . + 0 ID=cds-WP_257756693.1;Parent=gene-NIV78_RS09495;Dbxref=Genbank:WP_257756693.1;Name=WP_257756693.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS09495;product=helix-turn-helix domain-containing protein;protein_id=WP_257756693.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2009206 2009697 . + . ID=gene-NIV78_RS09500;Name=NIV78_RS09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09500 NZ_CP100136.1 Protein Homology CDS 2009206 2009697 . + 0 ID=cds-WP_257756695.1;Parent=gene-NIV78_RS09500;Dbxref=Genbank:WP_257756695.1;Name=WP_257756695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009977940.1;locus_tag=NIV78_RS09500;product=phage N-6-adenine-methyltransferase;protein_id=WP_257756695.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2009694 2010257 . + . ID=gene-NIV78_RS09505;Name=NIV78_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09505 NZ_CP100136.1 GeneMarkS-2+ CDS 2009694 2010257 . + 0 ID=cds-WP_257756697.1;Parent=gene-NIV78_RS09505;Dbxref=Genbank:WP_257756697.1;Name=WP_257756697.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS09505;product=hypothetical protein;protein_id=WP_257756697.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2010254 2010994 . + . ID=gene-NIV78_RS09510;Name=NIV78_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09510 NZ_CP100136.1 Protein Homology CDS 2010254 2010994 . + 0 ID=cds-WP_257756699.1;Parent=gene-NIV78_RS09510;Dbxref=Genbank:WP_257756699.1;Name=WP_257756699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013956337.1;locus_tag=NIV78_RS09510;product=hypothetical protein;protein_id=WP_257756699.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2010991 2011329 . + . ID=gene-NIV78_RS09515;Name=NIV78_RS09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09515 NZ_CP100136.1 GeneMarkS-2+ CDS 2010991 2011329 . + 0 ID=cds-WP_251118800.1;Parent=gene-NIV78_RS09515;Dbxref=Genbank:WP_251118800.1;Name=WP_251118800.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS09515;product=hypothetical protein;protein_id=WP_251118800.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2011326 2011481 . + . ID=gene-NIV78_RS09520;Name=NIV78_RS09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09520 NZ_CP100136.1 GeneMarkS-2+ CDS 2011326 2011481 . + 0 ID=cds-WP_257756701.1;Parent=gene-NIV78_RS09520;Dbxref=Genbank:WP_257756701.1;Name=WP_257756701.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS09520;product=hypothetical protein;protein_id=WP_257756701.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2011478 2011714 . + . ID=gene-NIV78_RS09525;Name=NIV78_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09525 NZ_CP100136.1 GeneMarkS-2+ CDS 2011478 2011714 . + 0 ID=cds-WP_257756703.1;Parent=gene-NIV78_RS09525;Dbxref=Genbank:WP_257756703.1;Name=WP_257756703.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS09525;product=hypothetical protein;protein_id=WP_257756703.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2011711 2012724 . + . ID=gene-NIV78_RS09530;Name=NIV78_RS09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09530 NZ_CP100136.1 Protein Homology CDS 2011711 2012724 . + 0 ID=cds-WP_257756706.1;Parent=gene-NIV78_RS09530;Dbxref=Genbank:WP_257756706.1;Name=WP_257756706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876068.1;locus_tag=NIV78_RS09530;product=phage Gp37/Gp68 family protein;protein_id=WP_257756706.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2012727 2012963 . + . ID=gene-NIV78_RS09535;Name=NIV78_RS09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09535 NZ_CP100136.1 Protein Homology CDS 2012727 2012963 . + 0 ID=cds-WP_257756708.1;Parent=gene-NIV78_RS09535;Dbxref=Genbank:WP_257756708.1;Name=WP_257756708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875553.1;locus_tag=NIV78_RS09535;product=hypothetical protein;protein_id=WP_257756708.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2013086 2013508 . - . ID=gene-NIV78_RS09540;Name=NIV78_RS09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09540 NZ_CP100136.1 GeneMarkS-2+ CDS 2013086 2013508 . - 0 ID=cds-WP_080630099.1;Parent=gene-NIV78_RS09540;Dbxref=Genbank:WP_080630099.1;Name=WP_080630099.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS09540;product=hypothetical protein;protein_id=WP_080630099.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2013666 2014088 . - . ID=gene-NIV78_RS09545;Name=NIV78_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09545 NZ_CP100136.1 Protein Homology CDS 2013666 2014088 . - 0 ID=cds-WP_015875552.1;Parent=gene-NIV78_RS09545;Dbxref=Genbank:WP_015875552.1;Name=WP_015875552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366571.1;locus_tag=NIV78_RS09545;product=helix-turn-helix transcriptional regulator;protein_id=WP_015875552.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2014185 2015138 . + . ID=gene-NIV78_RS09550;Name=NIV78_RS09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09550 NZ_CP100136.1 Protein Homology CDS 2014185 2015138 . + 0 ID=cds-WP_043224705.1;Parent=gene-NIV78_RS09550;Dbxref=Genbank:WP_043224705.1;Name=WP_043224705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480225.1;locus_tag=NIV78_RS09550;product=aromatic alcohol reductase;protein_id=WP_043224705.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2015363 2016148 . - . ID=gene-NIV78_RS09555;Name=NIV78_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09555 NZ_CP100136.1 Protein Homology CDS 2015363 2016148 . - 0 ID=cds-WP_015875550.1;Parent=gene-NIV78_RS09555;Dbxref=Genbank:WP_015875550.1;Name=WP_015875550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875550.1;locus_tag=NIV78_RS09555;product=hydroxyethylthiazole kinase;protein_id=WP_015875550.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2016714 2018093 . - . ID=gene-NIV78_RS09560;Name=NIV78_RS09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09560 NZ_CP100136.1 Protein Homology CDS 2016714 2018093 . - 0 ID=cds-WP_017922174.1;Parent=gene-NIV78_RS09560;Dbxref=Genbank:WP_017922174.1;Name=WP_017922174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548508.1;locus_tag=NIV78_RS09560;product=glycosyl hydrolase family 28 protein;protein_id=WP_017922174.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2019504 2019746 . - . ID=gene-NIV78_RS09565;Name=NIV78_RS09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09565 NZ_CP100136.1 GeneMarkS-2+ CDS 2019504 2019746 . - 0 ID=cds-WP_035978512.1;Parent=gene-NIV78_RS09565;Dbxref=Genbank:WP_035978512.1;Name=WP_035978512.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS09565;product=hypothetical protein;protein_id=WP_035978512.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2020239 2021177 . - . ID=gene-NIV78_RS09570;Name=NIV78_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09570 NZ_CP100136.1 Protein Homology CDS 2020239 2021177 . - 0 ID=cds-WP_017922172.1;Parent=gene-NIV78_RS09570;Dbxref=Genbank:WP_017922172.1;Name=WP_017922172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425317.1;locus_tag=NIV78_RS09570;product=NADP-dependent oxidoreductase;protein_id=WP_017922172.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2021524 2022660 . + . ID=gene-NIV78_RS09575;Name=NIV78_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09575 NZ_CP100136.1 Protein Homology CDS 2021524 2022660 . + 0 ID=cds-WP_015875547.1;Parent=gene-NIV78_RS09575;Dbxref=Genbank:WP_015875547.1;Name=WP_015875547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875547.1;locus_tag=NIV78_RS09575;product=glutathione-independent formaldehyde dehydrogenase;protein_id=WP_015875547.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2022782 2023684 . + . ID=gene-NIV78_RS09580;Name=NIV78_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09580 NZ_CP100136.1 Protein Homology CDS 2022782 2023684 . + 0 ID=cds-WP_015875546.1;Parent=gene-NIV78_RS09580;Dbxref=Genbank:WP_015875546.1;Name=WP_015875546.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875546.1;locus_tag=NIV78_RS09580;product=SDR family oxidoreductase;protein_id=WP_015875546.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2023681 2024463 . + . ID=gene-NIV78_RS09585;Name=NIV78_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09585 NZ_CP100136.1 Protein Homology CDS 2023681 2024463 . + 0 ID=cds-WP_017922171.1;Parent=gene-NIV78_RS09585;Dbxref=Genbank:WP_017922171.1;Name=WP_017922171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875545.1;locus_tag=NIV78_RS09585;product=PIG-L family deacetylase;protein_id=WP_017922171.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2024484 2025461 . + . ID=gene-NIV78_RS09590;Name=NIV78_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09590 NZ_CP100136.1 Protein Homology CDS 2024484 2025461 . + 0 ID=cds-WP_251107387.1;Parent=gene-NIV78_RS09590;Dbxref=Genbank:WP_251107387.1;Name=WP_251107387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875544.1;locus_tag=NIV78_RS09590;product=glycosyltransferase;protein_id=WP_251107387.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2025451 2028120 . - . ID=gene-NIV78_RS09595;Name=NIV78_RS09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09595 NZ_CP100136.1 Protein Homology CDS 2025451 2028120 . - 0 ID=cds-WP_017923819.1;Parent=gene-NIV78_RS09595;Dbxref=Genbank:WP_017923819.1;Name=WP_017923819.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875543.1;locus_tag=NIV78_RS09595;product=ATP-binding cassette domain-containing protein;protein_id=WP_017923819.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2028627 2029916 . + . ID=gene-NIV78_RS09600;Name=NIV78_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09600 NZ_CP100136.1 Protein Homology CDS 2028627 2029916 . + 0 ID=cds-WP_251107386.1;Parent=gene-NIV78_RS09600;Dbxref=Genbank:WP_251107386.1;Name=WP_251107386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875542.1;locus_tag=NIV78_RS09600;product=glycosyltransferase;protein_id=WP_251107386.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2029967 2030575 . + . ID=gene-NIV78_RS09605;Name=NIV78_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09605 NZ_CP100136.1 Protein Homology CDS 2029967 2030575 . + 0 ID=cds-WP_015875541.1;Parent=gene-NIV78_RS09605;Dbxref=Genbank:WP_015875541.1;Name=WP_015875541.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020068328.1;locus_tag=NIV78_RS09605;product=HAD-IIIA family hydrolase;protein_id=WP_015875541.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2030572 2031768 . + . ID=gene-NIV78_RS09610;Name=NIV78_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09610 NZ_CP100136.1 Protein Homology CDS 2030572 2031768 . + 0 ID=cds-WP_015875540.1;Parent=gene-NIV78_RS09610;Dbxref=Genbank:WP_015875540.1;Name=WP_015875540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013341532.1;locus_tag=NIV78_RS09610;product=glycosyltransferase family 9 protein;protein_id=WP_015875540.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2031793 2033538 . + . ID=gene-NIV78_RS09615;Name=NIV78_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09615 NZ_CP100136.1 Protein Homology CDS 2031793 2033538 . + 0 ID=cds-WP_015875539.1;Parent=gene-NIV78_RS09615;Dbxref=Genbank:WP_015875539.1;Name=WP_015875539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875539.1;locus_tag=NIV78_RS09615;product=carbamoyltransferase;protein_id=WP_015875539.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2033535 2034614 . + . ID=gene-NIV78_RS09620;Name=NIV78_RS09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09620 NZ_CP100136.1 Protein Homology CDS 2033535 2034614 . + 0 ID=cds-WP_251107384.1;Parent=gene-NIV78_RS09620;Dbxref=Genbank:WP_251107384.1;Name=WP_251107384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017774170.1;locus_tag=NIV78_RS09620;product=glycosyltransferase;protein_id=WP_251107384.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2034611 2035735 . + . ID=gene-NIV78_RS09625;Name=NIV78_RS09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09625 NZ_CP100136.1 Protein Homology CDS 2034611 2035735 . + 0 ID=cds-WP_251107383.1;Parent=gene-NIV78_RS09625;Dbxref=Genbank:WP_251107383.1;Name=WP_251107383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876257.1;locus_tag=NIV78_RS09625;product=glycosyltransferase family 9 protein;protein_id=WP_251107383.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2035725 2036681 . + . ID=gene-NIV78_RS09630;Name=NIV78_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09630 NZ_CP100136.1 Protein Homology CDS 2035725 2036681 . + 0 ID=cds-WP_015875536.1;Parent=gene-NIV78_RS09630;Dbxref=Genbank:WP_015875536.1;Name=WP_015875536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018422259.1;locus_tag=NIV78_RS09630;product=glycosyltransferase family 4 protein;protein_id=WP_015875536.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2036743 2037774 . + . ID=gene-NIV78_RS09635;Name=NIV78_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09635 NZ_CP100136.1 Protein Homology CDS 2036743 2037774 . + 0 ID=cds-WP_251107382.1;Parent=gene-NIV78_RS09635;Dbxref=Genbank:WP_251107382.1;Name=WP_251107382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425286.1;locus_tag=NIV78_RS09635;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_251107382.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2037991 2039073 . + . ID=gene-NIV78_RS09640;Name=NIV78_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09640 NZ_CP100136.1 Protein Homology CDS 2037991 2039073 . + 0 ID=cds-WP_251107381.1;Parent=gene-NIV78_RS09640;Dbxref=Genbank:WP_251107381.1;Name=WP_251107381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875534.1;locus_tag=NIV78_RS09640;product=catalase family protein;protein_id=WP_251107381.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2039106 2041439 . + . ID=gene-NIV78_RS09645;Name=NIV78_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09645 NZ_CP100136.1 Protein Homology CDS 2039106 2041439 . + 0 ID=cds-WP_015875533.1;Parent=gene-NIV78_RS09645;Dbxref=Genbank:WP_015875533.1;Name=WP_015875533.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424700.1;locus_tag=NIV78_RS09645;product=FdhF/YdeP family oxidoreductase;protein_id=WP_015875533.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2041494 2042645 . + . ID=gene-NIV78_RS09650;Name=NIV78_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09650 NZ_CP100136.1 GeneMarkS-2+ CDS 2041494 2042645 . + 0 ID=cds-WP_257756713.1;Parent=gene-NIV78_RS09650;Dbxref=Genbank:WP_257756713.1;Name=WP_257756713.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS09650;product=acyl-CoA dehydrogenase;protein_id=WP_257756713.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2042657 2043292 . + . ID=gene-NIV78_RS09655;Name=NIV78_RS09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09655 NZ_CP100136.1 Protein Homology CDS 2042657 2043292 . + 0 ID=cds-WP_100556652.1;Parent=gene-NIV78_RS09655;Dbxref=Genbank:WP_100556652.1;Name=WP_100556652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875531.1;locus_tag=NIV78_RS09655;product=SAM-dependent methyltransferase;protein_id=WP_100556652.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2043301 2044119 . - . ID=gene-NIV78_RS09660;Name=NIV78_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09660 NZ_CP100136.1 Protein Homology CDS 2043301 2044119 . - 0 ID=cds-WP_251107380.1;Parent=gene-NIV78_RS09660;Dbxref=Genbank:WP_251107380.1;Name=WP_251107380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875530.1;locus_tag=NIV78_RS09660;product=PIG-L family deacetylase;protein_id=WP_251107380.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2044116 2044841 . - . ID=gene-NIV78_RS09665;Name=NIV78_RS09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09665 NZ_CP100136.1 Protein Homology CDS 2044116 2044841 . - 0 ID=cds-WP_015875529.1;Parent=gene-NIV78_RS09665;Dbxref=Genbank:WP_015875529.1;Name=WP_015875529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012433235.1;locus_tag=NIV78_RS09665;product=glycosyltransferase;protein_id=WP_015875529.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2044963 2045343 . - . ID=gene-NIV78_RS09670;Name=NIV78_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09670 NZ_CP100136.1 GeneMarkS-2+ CDS 2044963 2045343 . - 0 ID=cds-WP_039202793.1;Parent=gene-NIV78_RS09670;Dbxref=Genbank:WP_039202793.1;Name=WP_039202793.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS09670;product=hypothetical protein;protein_id=WP_039202793.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2046004 2047014 . + . ID=gene-NIV78_RS09675;Name=coxB;gbkey=Gene;gene=coxB;gene_biotype=protein_coding;locus_tag=NIV78_RS09675 NZ_CP100136.1 Protein Homology CDS 2046004 2047014 . + 0 ID=cds-WP_124836141.1;Parent=gene-NIV78_RS09675;Dbxref=Genbank:WP_124836141.1;Name=WP_124836141.1;Ontology_term=GO:0004129;gbkey=CDS;gene=coxB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875528.1;locus_tag=NIV78_RS09675;product=cytochrome c oxidase subunit II;protein_id=WP_124836141.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2047022 2049688 . + . ID=gene-NIV78_RS09680;Name=ctaD;gbkey=Gene;gene=ctaD;gene_biotype=protein_coding;locus_tag=NIV78_RS09680 NZ_CP100136.1 Protein Homology CDS 2047022 2049688 . + 0 ID=cds-WP_257756717.1;Parent=gene-NIV78_RS09680;Dbxref=Genbank:WP_257756717.1;Name=WP_257756717.1;Ontology_term=GO:0004129;gbkey=CDS;gene=ctaD;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875527.1;locus_tag=NIV78_RS09680;product=cytochrome c oxidase subunit I;protein_id=WP_257756717.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2049685 2050068 . + . ID=gene-NIV78_RS09685;Name=NIV78_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09685 NZ_CP100136.1 Protein Homology CDS 2049685 2050068 . + 0 ID=cds-WP_015875526.1;Parent=gene-NIV78_RS09685;Dbxref=Genbank:WP_015875526.1;Name=WP_015875526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217905.1;locus_tag=NIV78_RS09685;product=hypothetical protein;protein_id=WP_015875526.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2050062 2051405 . + . ID=gene-NIV78_RS09690;Name=NIV78_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09690 NZ_CP100136.1 Protein Homology CDS 2050062 2051405 . + 0 ID=cds-WP_251107378.1;Parent=gene-NIV78_RS09690;Dbxref=Genbank:WP_251107378.1;Name=WP_251107378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875525.1;locus_tag=NIV78_RS09690;product=c-type cytochrome;protein_id=WP_251107378.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2051419 2052576 . - . ID=gene-NIV78_RS09695;Name=NIV78_RS09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09695 NZ_CP100136.1 Protein Homology CDS 2051419 2052576 . - 0 ID=cds-WP_017924101.1;Parent=gene-NIV78_RS09695;Dbxref=Genbank:WP_017924101.1;Name=WP_017924101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875524.1;locus_tag=NIV78_RS09695;product=HAMP domain-containing histidine kinase;protein_id=WP_017924101.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2053095 2053325 . - . ID=gene-NIV78_RS09700;Name=NIV78_RS09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09700 NZ_CP100136.1 GeneMarkS-2+ CDS 2053095 2053325 . - 0 ID=cds-WP_017924102.1;Parent=gene-NIV78_RS09700;Dbxref=Genbank:WP_017924102.1;Name=WP_017924102.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS09700;product=hypothetical protein;protein_id=WP_017924102.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2053330 2053536 . - . ID=gene-NIV78_RS09705;Name=NIV78_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09705 NZ_CP100136.1 GeneMarkS-2+ CDS 2053330 2053536 . - 0 ID=cds-WP_043194904.1;Parent=gene-NIV78_RS09705;Dbxref=Genbank:WP_043194904.1;Name=WP_043194904.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS09705;product=hypothetical protein;protein_id=WP_043194904.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2053627 2054841 . - . ID=gene-NIV78_RS09710;Name=NIV78_RS09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09710 NZ_CP100136.1 Protein Homology CDS 2053627 2054841 . - 0 ID=cds-WP_015875523.1;Parent=gene-NIV78_RS09710;Dbxref=Genbank:WP_015875523.1;Name=WP_015875523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398890.1;locus_tag=NIV78_RS09710;product=glutathione-dependent formaldehyde dehydrogenase;protein_id=WP_015875523.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2055245 2055694 . - . ID=gene-NIV78_RS09715;Name=NIV78_RS09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09715 NZ_CP100136.1 Protein Homology CDS 2055245 2055694 . - 0 ID=cds-WP_232734526.1;Parent=gene-NIV78_RS09715;Dbxref=Genbank:WP_232734526.1;Name=WP_232734526.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875522.1;locus_tag=NIV78_RS09715;product=response regulator;protein_id=WP_232734526.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2056499 2057695 . + . ID=gene-NIV78_RS09720;Name=NIV78_RS09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09720 NZ_CP100136.1 Protein Homology CDS 2056499 2057695 . + 0 ID=cds-WP_232734525.1;Parent=gene-NIV78_RS09720;Dbxref=Genbank:WP_232734525.1;Name=WP_232734525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875520.1;locus_tag=NIV78_RS09720;product=hypothetical protein;protein_id=WP_232734525.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2057781 2058527 . - . ID=gene-NIV78_RS09725;Name=NIV78_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09725 NZ_CP100136.1 Protein Homology CDS 2057781 2058527 . - 0 ID=cds-WP_015875519.1;Parent=gene-NIV78_RS09725;Dbxref=Genbank:WP_015875519.1;Name=WP_015875519.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875519.1;locus_tag=NIV78_RS09725;product=glucose 1-dehydrogenase;protein_id=WP_015875519.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2058958 2059167 . - . ID=gene-NIV78_RS09730;Name=NIV78_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09730 NZ_CP100136.1 GeneMarkS-2+ CDS 2058958 2059167 . - 0 ID=cds-WP_017433095.1;Parent=gene-NIV78_RS09730;Dbxref=Genbank:WP_017433095.1;Name=WP_017433095.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS09730;product=hypothetical protein;protein_id=WP_017433095.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2059470 2059904 . + . ID=gene-NIV78_RS09735;Name=NIV78_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09735 NZ_CP100136.1 GeneMarkS-2+ CDS 2059470 2059904 . + 0 ID=cds-WP_153477426.1;Parent=gene-NIV78_RS09735;Dbxref=Genbank:WP_153477426.1;Name=WP_153477426.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS09735;product=hypothetical protein;protein_id=WP_153477426.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2059996 2061843 . + . ID=gene-NIV78_RS09740;Name=NIV78_RS09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09740 NZ_CP100136.1 Protein Homology CDS 2059996 2061843 . + 0 ID=cds-WP_017923575.1;Parent=gene-NIV78_RS09740;Dbxref=Genbank:WP_017923575.1;Name=WP_017923575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875518.1;locus_tag=NIV78_RS09740;product=hypothetical protein;protein_id=WP_017923575.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2061908 2062318 . + . ID=gene-NIV78_RS09745;Name=NIV78_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09745 NZ_CP100136.1 GeneMarkS-2+ CDS 2061908 2062318 . + 0 ID=cds-WP_017923574.1;Parent=gene-NIV78_RS09745;Dbxref=Genbank:WP_017923574.1;Name=WP_017923574.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS09745;product=hypothetical protein;protein_id=WP_017923574.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2062492 2063562 . + . ID=gene-NIV78_RS09750;Name=NIV78_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09750 NZ_CP100136.1 Protein Homology CDS 2062492 2063562 . + 0 ID=cds-WP_257756718.1;Parent=gene-NIV78_RS09750;Dbxref=Genbank:WP_257756718.1;Name=WP_257756718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007730163.1;locus_tag=NIV78_RS09750;product=SDR family oxidoreductase;protein_id=WP_257756718.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2063805 2065166 . + . ID=gene-NIV78_RS09755;Name=NIV78_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09755 NZ_CP100136.1 GeneMarkS-2+ CDS 2063805 2065166 . + 0 ID=cds-WP_257756721.1;Parent=gene-NIV78_RS09755;Dbxref=Genbank:WP_257756721.1;Name=WP_257756721.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS09755;product=hypothetical protein;protein_id=WP_257756721.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2065498 2066562 . + . ID=gene-NIV78_RS09760;Name=NIV78_RS09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09760 NZ_CP100136.1 Protein Homology CDS 2065498 2066562 . + 0 ID=cds-WP_015875515.1;Parent=gene-NIV78_RS09760;Dbxref=Genbank:WP_015875515.1;Name=WP_015875515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875515.1;locus_tag=NIV78_RS09760;product=response regulator transcription factor;protein_id=WP_015875515.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2066723 2067295 . - . ID=gene-NIV78_RS09765;Name=phaR;gbkey=Gene;gene=phaR;gene_biotype=protein_coding;locus_tag=NIV78_RS09765 NZ_CP100136.1 Protein Homology CDS 2066723 2067295 . - 0 ID=cds-WP_015875514.1;Parent=gene-NIV78_RS09765;Dbxref=Genbank:WP_015875514.1;Name=WP_015875514.1;Ontology_term=GO:0006355;gbkey=CDS;gene=phaR;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192676.1;locus_tag=NIV78_RS09765;product=polyhydroxyalkanoate synthesis repressor PhaR;protein_id=WP_015875514.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2067435 2068175 . - . ID=gene-NIV78_RS09770;Name=NIV78_RS09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09770 NZ_CP100136.1 Protein Homology CDS 2067435 2068175 . - 0 ID=cds-WP_015875513.1;Parent=gene-NIV78_RS09770;Dbxref=Genbank:WP_015875513.1;Name=WP_015875513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007586437.1;locus_tag=NIV78_RS09770;product=3-ketoacyl-ACP reductase;protein_id=WP_015875513.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2068275 2069456 . - . ID=gene-NIV78_RS09775;Name=NIV78_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09775 NZ_CP100136.1 Protein Homology CDS 2068275 2069456 . - 0 ID=cds-WP_017923940.1;Parent=gene-NIV78_RS09775;Dbxref=Genbank:WP_017923940.1;Name=WP_017923940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009905164.1;locus_tag=NIV78_RS09775;product=acetyl-CoA C-acetyltransferase;protein_id=WP_017923940.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2069567 2071480 . - . ID=gene-NIV78_RS09780;Name=phaC;gbkey=Gene;gene=phaC;gene_biotype=protein_coding;locus_tag=NIV78_RS09780 NZ_CP100136.1 Protein Homology CDS 2069567 2071480 . - 0 ID=cds-WP_015875511.1;Parent=gene-NIV78_RS09780;Dbxref=Genbank:WP_015875511.1;Name=WP_015875511.1;Ontology_term=GO:0042619,GO:0016746;gbkey=CDS;gene=phaC;go_function=acyltransferase activity|0016746||IEA;go_process=poly-hydroxybutyrate biosynthetic process|0042619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698226.1;locus_tag=NIV78_RS09780;product=class I poly(R)-hydroxyalkanoic acid synthase;protein_id=WP_015875511.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2071933 2072796 . - . ID=gene-NIV78_RS09785;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=NIV78_RS09785 NZ_CP100136.1 Protein Homology CDS 2071933 2072796 . - 0 ID=cds-WP_100555882.1;Parent=gene-NIV78_RS09785;Dbxref=Genbank:WP_100555882.1;Name=WP_100555882.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875510.1;locus_tag=NIV78_RS09785;product=peptidoglycan editing factor PgeF;protein_id=WP_100555882.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2072797 2073999 . - . ID=gene-NIV78_RS09790;Name=NIV78_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09790 NZ_CP100136.1 Protein Homology CDS 2072797 2073999 . - 0 ID=cds-WP_015875509.1;Parent=gene-NIV78_RS09790;Dbxref=Genbank:WP_015875509.1;Name=WP_015875509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896926.1;locus_tag=NIV78_RS09790;product=RluA family pseudouridine synthase;protein_id=WP_015875509.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2074051 2074878 . + . ID=gene-NIV78_RS09795;Name=NIV78_RS09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09795 NZ_CP100136.1 Protein Homology CDS 2074051 2074878 . + 0 ID=cds-WP_026051703.1;Parent=gene-NIV78_RS09795;Dbxref=Genbank:WP_026051703.1;Name=WP_026051703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026946.1;locus_tag=NIV78_RS09795;product=outer membrane protein assembly factor BamD;protein_id=WP_026051703.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2075014 2077275 . - . ID=gene-NIV78_RS09800;Name=NIV78_RS09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09800 NZ_CP100136.1 Protein Homology CDS 2075014 2077275 . - 0 ID=cds-WP_015875507.1;Parent=gene-NIV78_RS09800;Dbxref=Genbank:WP_015875507.1;Name=WP_015875507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875507.1;locus_tag=NIV78_RS09800;product=ATP-dependent DNA helicase;protein_id=WP_015875507.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2077334 2077549 . - . ID=gene-NIV78_RS09805;Name=NIV78_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09805 NZ_CP100136.1 Protein Homology CDS 2077334 2077549 . - 0 ID=cds-WP_015875506.1;Parent=gene-NIV78_RS09805;Dbxref=Genbank:WP_015875506.1;Name=WP_015875506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010103275.1;locus_tag=NIV78_RS09805;product=YdcH family protein;protein_id=WP_015875506.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2077676 2078413 . - . ID=gene-NIV78_RS09810;Name=NIV78_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09810 NZ_CP100136.1 Protein Homology CDS 2077676 2078413 . - 0 ID=cds-WP_251107568.1;Parent=gene-NIV78_RS09810;Dbxref=Genbank:WP_251107568.1;Name=WP_251107568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478691.1;locus_tag=NIV78_RS09810;product=colicin transporter;protein_id=WP_251107568.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2078555 2080885 . + . ID=gene-NIV78_RS09815;Name=NIV78_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09815 NZ_CP100136.1 Protein Homology CDS 2078555 2080885 . + 0 ID=cds-WP_015875504.1;Parent=gene-NIV78_RS09815;Dbxref=Genbank:WP_015875504.1;Name=WP_015875504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352249.1;locus_tag=NIV78_RS09815;product=RNA-binding transcriptional accessory protein;protein_id=WP_015875504.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2081054 2082946 . - . ID=gene-NIV78_RS09820;Name=NIV78_RS09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09820 NZ_CP100136.1 Protein Homology CDS 2081054 2082946 . - 0 ID=cds-WP_026051469.1;Parent=gene-NIV78_RS09820;Dbxref=Genbank:WP_026051469.1;Name=WP_026051469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191791.1;locus_tag=NIV78_RS09820;product=potassium transporter Kup;protein_id=WP_026051469.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2083162 2083758 . - . ID=gene-NIV78_RS09825;Name=NIV78_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09825 NZ_CP100136.1 Protein Homology CDS 2083162 2083758 . - 0 ID=cds-WP_015875502.1;Parent=gene-NIV78_RS09825;Dbxref=Genbank:WP_015875502.1;Name=WP_015875502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875502.1;locus_tag=NIV78_RS09825;product=phosphoribosyltransferase;protein_id=WP_015875502.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2083766 2085112 . - . ID=gene-NIV78_RS09830;Name=NIV78_RS09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09830 NZ_CP100136.1 Protein Homology CDS 2083766 2085112 . - 0 ID=cds-WP_015875501.1;Parent=gene-NIV78_RS09830;Dbxref=Genbank:WP_015875501.1;Name=WP_015875501.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193462.1;locus_tag=NIV78_RS09830;product=adenylosuccinate synthase;protein_id=WP_015875501.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2085250 2086398 . - . ID=gene-NIV78_RS09835;Name=NIV78_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09835 NZ_CP100136.1 Protein Homology CDS 2085250 2086398 . - 0 ID=cds-WP_015875500.1;Parent=gene-NIV78_RS09835;Dbxref=Genbank:WP_015875500.1;Name=WP_015875500.1;Ontology_term=GO:0000105;gbkey=CDS;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192327.1;locus_tag=NIV78_RS09835;product=ATP phosphoribosyltransferase regulatory subunit;protein_id=WP_015875500.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2086567 2086758 . - . ID=gene-NIV78_RS09840;Name=NIV78_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09840 NZ_CP100136.1 Protein Homology CDS 2086567 2086758 . - 0 ID=cds-WP_015875499.1;Parent=gene-NIV78_RS09840;Dbxref=Genbank:WP_015875499.1;Name=WP_015875499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009973312.1;locus_tag=NIV78_RS09840;product=DUF2065 domain-containing protein;protein_id=WP_015875499.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2086800 2087702 . - . ID=gene-NIV78_RS09845;Name=NIV78_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09845 NZ_CP100136.1 Protein Homology CDS 2086800 2087702 . - 0 ID=cds-WP_015875498.1;Parent=gene-NIV78_RS09845;Dbxref=Genbank:WP_015875498.1;Name=WP_015875498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896916.1;locus_tag=NIV78_RS09845;product=protease modulator HflC;protein_id=WP_015875498.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2087718 2089130 . - . ID=gene-NIV78_RS09850;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=NIV78_RS09850 NZ_CP100136.1 Protein Homology CDS 2087718 2089130 . - 0 ID=cds-WP_015875497.1;Parent=gene-NIV78_RS09850;Dbxref=Genbank:WP_015875497.1;Name=WP_015875497.1;Ontology_term=GO:0045861,GO:0003674,GO:0030288;gbkey=CDS;gene=hflK;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=molecular_function|0003674||IEA;go_process=negative regulation of proteolysis|0045861||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521338.1;locus_tag=NIV78_RS09850;product=FtsH protease activity modulator HflK;protein_id=WP_015875497.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2089179 2090360 . - . ID=gene-NIV78_RS09855;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=NIV78_RS09855 NZ_CP100136.1 Protein Homology CDS 2089179 2090360 . - 0 ID=cds-WP_026051468.1;Parent=gene-NIV78_RS09855;Dbxref=Genbank:WP_026051468.1;Name=WP_026051468.1;Ontology_term=GO:0008150,GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875496.1;locus_tag=NIV78_RS09855;product=GTPase HflX;protein_id=WP_026051468.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2090433 2090675 . - . ID=gene-NIV78_RS09860;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=NIV78_RS09860 NZ_CP100136.1 Protein Homology CDS 2090433 2090675 . - 0 ID=cds-WP_026051467.1;Parent=gene-NIV78_RS09860;Dbxref=Genbank:WP_026051467.1;Name=WP_026051467.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875495.1;locus_tag=NIV78_RS09860;product=RNA chaperone Hfq;protein_id=WP_026051467.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2090796 2092142 . - . ID=gene-NIV78_RS09865;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=NIV78_RS09865 NZ_CP100136.1 Protein Homology CDS 2090796 2092142 . - 0 ID=cds-WP_017923095.1;Parent=gene-NIV78_RS09865;Dbxref=Genbank:WP_017923095.1;Name=WP_017923095.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698242.1;locus_tag=NIV78_RS09865;product=ribosome biogenesis GTPase Der;protein_id=WP_017923095.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2092411 2093556 . - . ID=gene-NIV78_RS09870;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=NIV78_RS09870 NZ_CP100136.1 Protein Homology CDS 2092411 2093556 . - 0 ID=cds-WP_015875493.1;Parent=gene-NIV78_RS09870;Dbxref=Genbank:WP_015875493.1;Name=WP_015875493.1;Ontology_term=GO:0005515,GO:0009279;gbkey=CDS;gene=bamB;go_component=cell outer membrane|0009279||IEA;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875493.1;locus_tag=NIV78_RS09870;product=outer membrane protein assembly factor BamB;protein_id=WP_015875493.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2093601 2094230 . - . ID=gene-NIV78_RS09875;Name=NIV78_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09875 NZ_CP100136.1 Protein Homology CDS 2093601 2094230 . - 0 ID=cds-WP_015875492.1;Parent=gene-NIV78_RS09875;Dbxref=Genbank:WP_015875492.1;Name=WP_015875492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698244.1;locus_tag=NIV78_RS09875;product=tetratricopeptide repeat protein;protein_id=WP_015875492.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2094283 2095623 . - . ID=gene-NIV78_RS09880;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=NIV78_RS09880 NZ_CP100136.1 Protein Homology CDS 2094283 2095623 . - 0 ID=cds-WP_015875491.1;Parent=gene-NIV78_RS09880;Dbxref=Genbank:WP_015875491.1;Name=WP_015875491.1;Ontology_term=GO:0006427,GO:0004821,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764216.1;locus_tag=NIV78_RS09880;product=histidine--tRNA ligase;protein_id=WP_015875491.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2095639 2096943 . - . ID=gene-NIV78_RS09885;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=NIV78_RS09885 NZ_CP100136.1 Protein Homology CDS 2095639 2096943 . - 0 ID=cds-WP_035982366.1;Parent=gene-NIV78_RS09885;Dbxref=Genbank:WP_035982366.1;Name=WP_035982366.1;Ontology_term=GO:0044237,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity|0046429||IEA;go_process=cellular metabolic process|0044237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875490.1;locus_tag=NIV78_RS09885;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_035982366.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2097032 2098024 . - . ID=gene-NIV78_RS09890;Name=NIV78_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09890 NZ_CP100136.1 Protein Homology CDS 2097032 2098024 . - 0 ID=cds-WP_015875489.1;Parent=gene-NIV78_RS09890;Dbxref=Genbank:WP_015875489.1;Name=WP_015875489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009905120.1;locus_tag=NIV78_RS09890;product=helix-turn-helix domain-containing protein;protein_id=WP_015875489.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2098169 2099305 . - . ID=gene-NIV78_RS09895;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=NIV78_RS09895 NZ_CP100136.1 Protein Homology CDS 2098169 2099305 . - 0 ID=cds-WP_257756725.1;Parent=gene-NIV78_RS09895;Dbxref=Genbank:WP_257756725.1;Name=WP_257756725.1;Ontology_term=GO:0031167,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884970.1;locus_tag=NIV78_RS09895;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=WP_257756725.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2099346 2099771 . - . ID=gene-NIV78_RS09900;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=NIV78_RS09900 NZ_CP100136.1 Protein Homology CDS 2099346 2099771 . - 0 ID=cds-WP_015875487.1;Parent=gene-NIV78_RS09900;Dbxref=Genbank:WP_015875487.1;Name=WP_015875487.1;Ontology_term=GO:0006165,GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;go_process=nucleoside diphosphate phosphorylation|0006165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012433533.1;locus_tag=NIV78_RS09900;product=nucleoside-diphosphate kinase;protein_id=WP_015875487.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2100053 2100748 . + . ID=gene-NIV78_RS09905;Name=NIV78_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09905 NZ_CP100136.1 Protein Homology CDS 2100053 2100748 . + 0 ID=cds-WP_017923247.1;Parent=gene-NIV78_RS09905;Dbxref=Genbank:WP_017923247.1;Name=WP_017923247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698250.1;locus_tag=NIV78_RS09905;product=Bax inhibitor-1/YccA family protein;protein_id=WP_017923247.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2100866 2102260 . - . ID=gene-NIV78_RS09910;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=NIV78_RS09910 NZ_CP100136.1 Protein Homology CDS 2100866 2102260 . - 0 ID=cds-WP_017425298.1;Parent=gene-NIV78_RS09910;Dbxref=Genbank:WP_017425298.1;Name=WP_017425298.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192701.1;locus_tag=NIV78_RS09910;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_017425298.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2102333 2103190 . + . ID=gene-NIV78_RS09915;Name=NIV78_RS09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09915 NZ_CP100136.1 Protein Homology CDS 2102333 2103190 . + 0 ID=cds-WP_017923245.1;Parent=gene-NIV78_RS09915;Dbxref=Genbank:WP_017923245.1;Name=WP_017923245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399899.1;locus_tag=NIV78_RS09915;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_017923245.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2103257 2104033 . - . ID=gene-NIV78_RS09920;Name=NIV78_RS09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09920 NZ_CP100136.1 Protein Homology CDS 2103257 2104033 . - 0 ID=cds-WP_015875483.1;Parent=gene-NIV78_RS09920;Dbxref=Genbank:WP_015875483.1;Name=WP_015875483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698253.1;locus_tag=NIV78_RS09920;product=3'-5' exonuclease;protein_id=WP_015875483.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2104041 2105135 . - . ID=gene-NIV78_RS09925;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=NIV78_RS09925 NZ_CP100136.1 Protein Homology CDS 2104041 2105135 . - 0 ID=cds-WP_015875482.1;Parent=gene-NIV78_RS09925;Dbxref=Genbank:WP_015875482.1;Name=WP_015875482.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193640.1;locus_tag=NIV78_RS09925;product=RNA polymerase sigma factor RpoS;protein_id=WP_015875482.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2105147 2106049 . - . ID=gene-NIV78_RS09930;Name=NIV78_RS09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09930 NZ_CP100136.1 Protein Homology CDS 2105147 2106049 . - 0 ID=cds-WP_039200960.1;Parent=gene-NIV78_RS09930;Dbxref=Genbank:WP_039200960.1;Name=WP_039200960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026974.1;locus_tag=NIV78_RS09930;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_039200960.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2106061 2106927 . - . ID=gene-NIV78_RS09935;Name=NIV78_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09935 NZ_CP100136.1 Protein Homology CDS 2106061 2106927 . - 0 ID=cds-WP_251107374.1;Parent=gene-NIV78_RS09935;Dbxref=Genbank:WP_251107374.1;Name=WP_251107374.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352272.1;locus_tag=NIV78_RS09935;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WP_251107374.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2106924 2107685 . - . ID=gene-NIV78_RS09940;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=NIV78_RS09940 NZ_CP100136.1 Protein Homology CDS 2106924 2107685 . - 0 ID=cds-WP_015875479.1;Parent=gene-NIV78_RS09940;Dbxref=Genbank:WP_015875479.1;Name=WP_015875479.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011488250.1;locus_tag=NIV78_RS09940;product=5'/3'-nucleotidase SurE;protein_id=WP_015875479.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2107756 2108961 . - . ID=gene-NIV78_RS09945;Name=NIV78_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09945 NZ_CP100136.1 Protein Homology CDS 2107756 2108961 . - 0 ID=cds-WP_017423439.1;Parent=gene-NIV78_RS09945;Dbxref=Genbank:WP_017423439.1;Name=WP_017423439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191282.1;locus_tag=NIV78_RS09945;product=CoA transferase;protein_id=WP_017423439.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2109008 2109604 . - . ID=gene-NIV78_RS09950;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=NIV78_RS09950 NZ_CP100136.1 Protein Homology CDS 2109008 2109604 . - 0 ID=cds-WP_017924061.1;Parent=gene-NIV78_RS09950;Dbxref=Genbank:WP_017924061.1;Name=WP_017924061.1;Ontology_term=GO:0006281,GO:0006310;gbkey=CDS;gene=recR;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875477.1;locus_tag=NIV78_RS09950;product=recombination mediator RecR;protein_id=WP_017924061.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2109647 2109973 . - . ID=gene-NIV78_RS09955;Name=NIV78_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09955 NZ_CP100136.1 Protein Homology CDS 2109647 2109973 . - 0 ID=cds-WP_013698260.1;Parent=gene-NIV78_RS09955;Dbxref=Genbank:WP_013698260.1;Name=WP_013698260.1;Ontology_term=GO:0008150,GO:0003677,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006048866.1;locus_tag=NIV78_RS09955;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_013698260.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2110060 2112663 . - . ID=gene-NIV78_RS09960;Name=NIV78_RS09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09960 NZ_CP100136.1 Protein Homology CDS 2110060 2112663 . - 0 ID=cds-WP_100555871.1;Parent=gene-NIV78_RS09960;Dbxref=Genbank:WP_100555871.1;Name=WP_100555871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004555884.1;locus_tag=NIV78_RS09960;product=DNA polymerase III subunit gamma/tau;protein_id=WP_100555871.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2112912 2113010 . - . ID=gene-NIV78_RS09965;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=NIV78_RS09965 NZ_CP100136.1 cmsearch SRP_RNA 2112912 2113010 . - . ID=rna-NIV78_RS09965;Parent=gene-NIV78_RS09965;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS09965;product=signal recognition particle sRNA small type NZ_CP100136.1 cmsearch exon 2112912 2113010 . - . ID=exon-NIV78_RS09965-1;Parent=rna-NIV78_RS09965;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS09965;product=signal recognition particle sRNA small type NZ_CP100136.1 RefSeq gene 2113454 2113780 . + . ID=gene-NIV78_RS09970;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=NIV78_RS09970 NZ_CP100136.1 Protein Homology CDS 2113454 2113780 . + 0 ID=cds-WP_015875475.1;Parent=gene-NIV78_RS09970;Dbxref=Genbank:WP_015875475.1;Name=WP_015875475.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026981.1;locus_tag=NIV78_RS09970;product=thioredoxin TrxA;protein_id=WP_015875475.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2113983 2115245 . + . ID=gene-NIV78_RS09975;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=NIV78_RS09975 NZ_CP100136.1 Protein Homology CDS 2113983 2115245 . + 0 ID=cds-WP_015875474.1;Parent=gene-NIV78_RS09975;Dbxref=Genbank:WP_015875474.1;Name=WP_015875474.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013435079.1;locus_tag=NIV78_RS09975;product=transcription termination factor Rho;protein_id=WP_015875474.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2115414 2115914 . + . ID=gene-NIV78_RS09980;Name=NIV78_RS09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09980 NZ_CP100136.1 Protein Homology CDS 2115414 2115914 . + 0 ID=cds-WP_015875473.1;Parent=gene-NIV78_RS09980;Dbxref=Genbank:WP_015875473.1;Name=WP_015875473.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875473.1;locus_tag=NIV78_RS09980;product=MerR family transcriptional regulator;protein_id=WP_015875473.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2115911 2117470 . + . ID=gene-NIV78_RS09985;Name=NIV78_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09985 NZ_CP100136.1 Protein Homology CDS 2115911 2117470 . + 0 ID=cds-WP_015875472.1;Parent=gene-NIV78_RS09985;Dbxref=Genbank:WP_015875472.1;Name=WP_015875472.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875472.1;locus_tag=NIV78_RS09985;product=MFS transporter;protein_id=WP_015875472.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2117509 2118354 . + . ID=gene-NIV78_RS09990;Name=NIV78_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09990 NZ_CP100136.1 Protein Homology CDS 2117509 2118354 . + 0 ID=cds-WP_017922977.1;Parent=gene-NIV78_RS09990;Dbxref=Genbank:WP_017922977.1;Name=WP_017922977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875471.1;locus_tag=NIV78_RS09990;product=zinc-dependent peptidase;protein_id=WP_017922977.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2118506 2118766 . + . ID=gene-NIV78_RS09995;Name=NIV78_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS09995 NZ_CP100136.1 Protein Homology CDS 2118506 2118766 . + 0 ID=cds-WP_015875470.1;Parent=gene-NIV78_RS09995;Dbxref=Genbank:WP_015875470.1;Name=WP_015875470.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875470.1;locus_tag=NIV78_RS09995;product=type B 50S ribosomal protein L31;protein_id=WP_015875470.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2118953 2120704 . + . ID=gene-NIV78_RS10000;Name=NIV78_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10000 NZ_CP100136.1 Protein Homology CDS 2118953 2120704 . + 0 ID=cds-WP_015875469.1;Parent=gene-NIV78_RS10000;Dbxref=Genbank:WP_015875469.1;Name=WP_015875469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875469.1;locus_tag=NIV78_RS10000;product=UDP phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase;protein_id=WP_015875469.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2120707 2122062 . + . ID=gene-NIV78_RS10005;Name=NIV78_RS10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10005 NZ_CP100136.1 Protein Homology CDS 2120707 2122062 . + 0 ID=cds-WP_017922978.1;Parent=gene-NIV78_RS10005;Dbxref=Genbank:WP_017922978.1;Name=WP_017922978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875468.1;locus_tag=NIV78_RS10005;product=MATE family efflux transporter;protein_id=WP_017922978.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 2122149 2122625 . + . ID=gene-NIV78_RS10010;Name=NIV78_RS10010;end_range=2122625,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS10010;partial=true;pseudo=true;start_range=.,2122149 NZ_CP100136.1 Protein Homology CDS 2122149 2122625 . + 0 ID=cds-NIV78_RS10010;Parent=gene-NIV78_RS10010;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2122625,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407812.1;locus_tag=NIV78_RS10010;partial=true;product=sigma-54-dependent Fis family transcriptional regulator;pseudo=true;start_range=.,2122149;transl_table=11 NZ_CP100136.1 RefSeq gene 2122999 2123640 . + . ID=gene-NIV78_RS10015;Name=NIV78_RS10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10015 NZ_CP100136.1 Protein Homology CDS 2122999 2123640 . + 0 ID=cds-WP_251107567.1;Parent=gene-NIV78_RS10015;Dbxref=Genbank:WP_251107567.1;Name=WP_251107567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521312.1;locus_tag=NIV78_RS10015;product=helix-hairpin-helix domain-containing protein;protein_id=WP_251107567.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2123694 2124179 . + . ID=gene-NIV78_RS10020;Name=NIV78_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10020 NZ_CP100136.1 Protein Homology CDS 2123694 2124179 . + 0 ID=cds-WP_251107566.1;Parent=gene-NIV78_RS10020;Dbxref=Genbank:WP_251107566.1;Name=WP_251107566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010103168.1;locus_tag=NIV78_RS10020;product=YidB family protein;protein_id=WP_251107566.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2124310 2126907 . - . ID=gene-NIV78_RS10025;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=NIV78_RS10025 NZ_CP100136.1 Protein Homology CDS 2124310 2126907 . - 0 ID=cds-WP_015875465.1;Parent=gene-NIV78_RS10025;Dbxref=Genbank:WP_015875465.1;Name=WP_015875465.1;Ontology_term=GO:0006457,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890767.1;locus_tag=NIV78_RS10025;product=ATP-dependent chaperone ClpB;protein_id=WP_015875465.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2127325 2127795 . - . ID=gene-NIV78_RS10030;Name=NIV78_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10030 NZ_CP100136.1 Protein Homology CDS 2127325 2127795 . - 0 ID=cds-WP_015875464.1;Parent=gene-NIV78_RS10030;Dbxref=Genbank:WP_015875464.1;Name=WP_015875464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875464.1;locus_tag=NIV78_RS10030;product=Rrf2 family transcriptional regulator;protein_id=WP_015875464.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2127964 2128539 . + . ID=gene-NIV78_RS10035;Name=NIV78_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10035 NZ_CP100136.1 Protein Homology CDS 2127964 2128539 . + 0 ID=cds-WP_171466569.1;Parent=gene-NIV78_RS10035;Dbxref=Genbank:WP_171466569.1;Name=WP_171466569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875463.1;locus_tag=NIV78_RS10035;product=group III truncated hemoglobin;protein_id=WP_171466569.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2128593 2129771 . - . ID=gene-NIV78_RS10040;Name=NIV78_RS10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10040 NZ_CP100136.1 Protein Homology CDS 2128593 2129771 . - 0 ID=cds-WP_251107372.1;Parent=gene-NIV78_RS10040;Dbxref=Genbank:WP_251107372.1;Name=WP_251107372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875462.1;locus_tag=NIV78_RS10040;product=J domain-containing protein;protein_id=WP_251107372.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2129861 2130334 . - . ID=gene-NIV78_RS10045;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=NIV78_RS10045 NZ_CP100136.1 Protein Homology CDS 2129861 2130334 . - 0 ID=cds-WP_017924377.1;Parent=gene-NIV78_RS10045;Dbxref=Genbank:WP_017924377.1;Name=WP_017924377.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875461.1;locus_tag=NIV78_RS10045;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WP_017924377.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2130344 2130601 . - . ID=gene-NIV78_RS10050;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=NIV78_RS10050 NZ_CP100136.1 Protein Homology CDS 2130344 2130601 . - 0 ID=cds-WP_015875460.1;Parent=gene-NIV78_RS10050;Dbxref=Genbank:WP_015875460.1;Name=WP_015875460.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaD;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010115001.1;locus_tag=NIV78_RS10050;product=molybdopterin converting factor subunit 1;protein_id=WP_015875460.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2130621 2131892 . - . ID=gene-NIV78_RS10055;Name=NIV78_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10055 NZ_CP100136.1 Protein Homology CDS 2130621 2131892 . - 0 ID=cds-WP_100555867.1;Parent=gene-NIV78_RS10055;Dbxref=Genbank:WP_100555867.1;Name=WP_100555867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255166.1;locus_tag=NIV78_RS10055;product=molybdopterin molybdotransferase MoeA;protein_id=WP_100555867.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2132109 2133560 . - . ID=gene-NIV78_RS10060;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=NIV78_RS10060 NZ_CP100136.1 Protein Homology CDS 2132109 2133560 . - 0 ID=cds-WP_017923796.1;Parent=gene-NIV78_RS10060;Dbxref=Genbank:WP_017923796.1;Name=WP_017923796.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896870.1;locus_tag=NIV78_RS10060;product=threonine synthase;protein_id=WP_017923796.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2133568 2134893 . - . ID=gene-NIV78_RS10065;Name=NIV78_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10065 NZ_CP100136.1 Protein Homology CDS 2133568 2134893 . - 0 ID=cds-WP_017923797.1;Parent=gene-NIV78_RS10065;Dbxref=Genbank:WP_017923797.1;Name=WP_017923797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482858.1;locus_tag=NIV78_RS10065;product=homoserine dehydrogenase;protein_id=WP_017923797.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2134947 2136185 . - . ID=gene-NIV78_RS10070;Name=NIV78_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10070 NZ_CP100136.1 Protein Homology CDS 2134947 2136185 . - 0 ID=cds-WP_015875456.1;Parent=gene-NIV78_RS10070;Dbxref=Genbank:WP_015875456.1;Name=WP_015875456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890754.1;locus_tag=NIV78_RS10070;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_015875456.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2136519 2136899 . + . ID=gene-NIV78_RS10075;Name=NIV78_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10075 NZ_CP100136.1 Protein Homology CDS 2136519 2136899 . + 0 ID=cds-WP_017923188.1;Parent=gene-NIV78_RS10075;Dbxref=Genbank:WP_017923188.1;Name=WP_017923188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496387.1;locus_tag=NIV78_RS10075;product=Mth938-like domain-containing protein;protein_id=WP_017923188.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2137063 2138757 . + . ID=gene-NIV78_RS10080;Name=NIV78_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10080 NZ_CP100136.1 Protein Homology CDS 2137063 2138757 . + 0 ID=cds-WP_017923187.1;Parent=gene-NIV78_RS10080;Dbxref=Genbank:WP_017923187.1;Name=WP_017923187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875454.1;locus_tag=NIV78_RS10080;product=glycosyltransferase family 39 protein;protein_id=WP_017923187.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2138772 2139143 . + . ID=gene-NIV78_RS10085;Name=NIV78_RS10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10085 NZ_CP100136.1 Protein Homology CDS 2138772 2139143 . + 0 ID=cds-WP_015875453.1;Parent=gene-NIV78_RS10085;Dbxref=Genbank:WP_015875453.1;Name=WP_015875453.1;Ontology_term=GO:0016020,GO:0016021;gbkey=CDS;go_component=membrane|0016020||IEA,integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482863.1;locus_tag=NIV78_RS10085;product=EamA family transporter;protein_id=WP_015875453.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2139340 2140491 . + . ID=gene-NIV78_RS10090;Name=NIV78_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10090 NZ_CP100136.1 Protein Homology CDS 2139340 2140491 . + 0 ID=cds-WP_017424601.1;Parent=gene-NIV78_RS10090;Dbxref=Genbank:WP_017424601.1;Name=WP_017424601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192765.1;locus_tag=NIV78_RS10090;product=DegT/DnrJ/EryC1/StrS aminotransferase family protein;protein_id=WP_017424601.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2140498 2141514 . + . ID=gene-NIV78_RS10095;Name=NIV78_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10095 NZ_CP100136.1 Protein Homology CDS 2140498 2141514 . + 0 ID=cds-WP_015875451.1;Parent=gene-NIV78_RS10095;Dbxref=Genbank:WP_015875451.1;Name=WP_015875451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875451.1;locus_tag=NIV78_RS10095;product=glycosyltransferase;protein_id=WP_015875451.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2141511 2142467 . + . ID=gene-NIV78_RS10100;Name=NIV78_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10100 NZ_CP100136.1 Protein Homology CDS 2141511 2142467 . + 0 ID=cds-WP_015875450.1;Parent=gene-NIV78_RS10100;Dbxref=Genbank:WP_015875450.1;Name=WP_015875450.1;Ontology_term=GO:0016742;gbkey=CDS;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004539650.1;locus_tag=NIV78_RS10100;product=formyltransferase;protein_id=WP_015875450.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2142464 2143519 . + . ID=gene-NIV78_RS10105;Name=NIV78_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10105 NZ_CP100136.1 Protein Homology CDS 2142464 2143519 . + 0 ID=cds-WP_015875449.1;Parent=gene-NIV78_RS10105;Dbxref=Genbank:WP_015875449.1;Name=WP_015875449.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352307.1;locus_tag=NIV78_RS10105;product=bifunctional UDP-4-keto-pentose/UDP-xylose synthase;protein_id=WP_015875449.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2143524 2144420 . + . ID=gene-NIV78_RS10110;Name=NIV78_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10110 NZ_CP100136.1 Protein Homology CDS 2143524 2144420 . + 0 ID=cds-WP_017923184.1;Parent=gene-NIV78_RS10110;Dbxref=Genbank:WP_017923184.1;Name=WP_017923184.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008349825.1;locus_tag=NIV78_RS10110;product=polysaccharide deacetylase family protein;protein_id=WP_017923184.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2144493 2144954 . + . ID=gene-NIV78_RS10115;Name=NIV78_RS10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10115 NZ_CP100136.1 Protein Homology CDS 2144493 2144954 . + 0 ID=cds-WP_015875447.1;Parent=gene-NIV78_RS10115;Dbxref=Genbank:WP_015875447.1;Name=WP_015875447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549652.1;locus_tag=NIV78_RS10115;product=peroxiredoxin;protein_id=WP_015875447.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2145280 2147091 . + . ID=gene-NIV78_RS10120;Name=NIV78_RS10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10120 NZ_CP100136.1 Protein Homology CDS 2145280 2147091 . + 0 ID=cds-WP_251107371.1;Parent=gene-NIV78_RS10120;Dbxref=Genbank:WP_251107371.1;Name=WP_251107371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527180.1;locus_tag=NIV78_RS10120;product=PhoH family protein;protein_id=WP_251107371.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2147977 2148531 . + . ID=gene-NIV78_RS10125;Name=NIV78_RS10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10125 NZ_CP100136.1 GeneMarkS-2+ CDS 2147977 2148531 . + 0 ID=cds-WP_232734523.1;Parent=gene-NIV78_RS10125;Dbxref=Genbank:WP_232734523.1;Name=WP_232734523.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS10125;product=hypothetical protein;protein_id=WP_232734523.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2149129 2150457 . - . ID=gene-NIV78_RS10130;Name=NIV78_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10130 NZ_CP100136.1 GeneMarkS-2+ CDS 2149129 2150457 . - 0 ID=cds-WP_157384146.1;Parent=gene-NIV78_RS10130;Dbxref=Genbank:WP_157384146.1;Name=WP_157384146.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS10130;product=hypothetical protein;protein_id=WP_157384146.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2150813 2151163 . + . ID=gene-NIV78_RS10135;Name=NIV78_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10135 NZ_CP100136.1 Protein Homology CDS 2150813 2151163 . + 0 ID=cds-WP_017923336.1;Parent=gene-NIV78_RS10135;Dbxref=Genbank:WP_017923336.1;Name=WP_017923336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875445.1;locus_tag=NIV78_RS10135;product=VOC family protein;protein_id=WP_017923336.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2151414 2151944 . + . ID=gene-NIV78_RS10140;Name=NIV78_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10140 NZ_CP100136.1 Protein Homology CDS 2151414 2151944 . + 0 ID=cds-WP_015875444.1;Parent=gene-NIV78_RS10140;Dbxref=Genbank:WP_015875444.1;Name=WP_015875444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875444.1;locus_tag=NIV78_RS10140;product=hypothetical protein;protein_id=WP_015875444.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2152230 2153384 . + . ID=gene-NIV78_RS10145;Name=NIV78_RS10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10145 NZ_CP100136.1 Protein Homology CDS 2152230 2153384 . + 0 ID=cds-WP_035981681.1;Parent=gene-NIV78_RS10145;Dbxref=Genbank:WP_035981681.1;Name=WP_035981681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875443.1;locus_tag=NIV78_RS10145;product=C40 family peptidase;protein_id=WP_035981681.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2153593 2154603 . - . ID=gene-NIV78_RS10150;Name=NIV78_RS10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10150 NZ_CP100136.1 Protein Homology CDS 2153593 2154603 . - 0 ID=cds-WP_015875442.1;Parent=gene-NIV78_RS10150;Dbxref=Genbank:WP_015875442.1;Name=WP_015875442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193771.1;locus_tag=NIV78_RS10150;product=inorganic phosphate transporter;protein_id=WP_015875442.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2154614 2155240 . - . ID=gene-NIV78_RS10155;Name=NIV78_RS10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10155 NZ_CP100136.1 Protein Homology CDS 2154614 2155240 . - 0 ID=cds-WP_015875441.1;Parent=gene-NIV78_RS10155;Dbxref=Genbank:WP_015875441.1;Name=WP_015875441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698298.1;locus_tag=NIV78_RS10155;product=DUF47 domain-containing protein;protein_id=WP_015875441.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2155377 2156759 . - . ID=gene-NIV78_RS10160;Name=NIV78_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10160 NZ_CP100136.1 Protein Homology CDS 2155377 2156759 . - 0 ID=cds-WP_015875440.1;Parent=gene-NIV78_RS10160;Dbxref=Genbank:WP_015875440.1;Name=WP_015875440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192724.1;locus_tag=NIV78_RS10160;product=replicative DNA helicase;protein_id=WP_015875440.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2156997 2157449 . - . ID=gene-NIV78_RS10165;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=NIV78_RS10165 NZ_CP100136.1 Protein Homology CDS 2156997 2157449 . - 0 ID=cds-WP_015875439.1;Parent=gene-NIV78_RS10165;Dbxref=Genbank:WP_015875439.1;Name=WP_015875439.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplI;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402297.1;locus_tag=NIV78_RS10165;product=50S ribosomal protein L9;protein_id=WP_015875439.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2157477 2157752 . - . ID=gene-NIV78_RS10170;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=NIV78_RS10170 NZ_CP100136.1 Protein Homology CDS 2157477 2157752 . - 0 ID=cds-WP_006486248.1;Parent=gene-NIV78_RS10170;Dbxref=Genbank:WP_006486248.1;Name=WP_006486248.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017776738.1;locus_tag=NIV78_RS10170;product=30S ribosomal protein S18;protein_id=WP_006486248.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2157756 2158055 . - . ID=gene-NIV78_RS10175;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=NIV78_RS10175 NZ_CP100136.1 Protein Homology CDS 2157756 2158055 . - 0 ID=cds-WP_015875438.1;Parent=gene-NIV78_RS10175;Dbxref=Genbank:WP_015875438.1;Name=WP_015875438.1;Ontology_term=GO:0006269,GO:0003697;gbkey=CDS;gene=priB;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328667.1;locus_tag=NIV78_RS10175;product=primosomal replication protein N;protein_id=WP_015875438.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2158094 2158468 . - . ID=gene-NIV78_RS10180;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=NIV78_RS10180 NZ_CP100136.1 Protein Homology CDS 2158094 2158468 . - 0 ID=cds-WP_015875437.1;Parent=gene-NIV78_RS10180;Dbxref=Genbank:WP_015875437.1;Name=WP_015875437.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010103105.1;locus_tag=NIV78_RS10180;product=30S ribosomal protein S6;protein_id=WP_015875437.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2158656 2159567 . - . ID=gene-NIV78_RS10185;Name=NIV78_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10185 NZ_CP100136.1 Protein Homology CDS 2158656 2159567 . - 0 ID=cds-WP_017423762.1;Parent=gene-NIV78_RS10185;Dbxref=Genbank:WP_017423762.1;Name=WP_017423762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423762.1;locus_tag=NIV78_RS10185;product=LysR substrate-binding domain-containing protein;protein_id=WP_017423762.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2159730 2161505 . + . ID=gene-NIV78_RS10190;Name=gcl;gbkey=Gene;gene=gcl;gene_biotype=protein_coding;locus_tag=NIV78_RS10190 NZ_CP100136.1 Protein Homology CDS 2159730 2161505 . + 0 ID=cds-WP_015875435.1;Parent=gene-NIV78_RS10190;Dbxref=Genbank:WP_015875435.1;Name=WP_015875435.1;Ontology_term=GO:0009028;gbkey=CDS;gene=gcl;go_function=tartronate-semialdehyde synthase activity|0009028||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896848.1;locus_tag=NIV78_RS10190;product=glyoxylate carboligase;protein_id=WP_015875435.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2161540 2162337 . + . ID=gene-NIV78_RS10195;Name=hyi;gbkey=Gene;gene=hyi;gene_biotype=protein_coding;locus_tag=NIV78_RS10195 NZ_CP100136.1 Protein Homology CDS 2161540 2162337 . + 0 ID=cds-WP_015875434.1;Parent=gene-NIV78_RS10195;Dbxref=Genbank:WP_015875434.1;Name=WP_015875434.1;gbkey=CDS;gene=hyi;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875434.1;locus_tag=NIV78_RS10195;product=hydroxypyruvate isomerase;protein_id=WP_015875434.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2162371 2163270 . + . ID=gene-NIV78_RS10200;Name=NIV78_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10200 NZ_CP100136.1 Protein Homology CDS 2162371 2163270 . + 0 ID=cds-WP_017922930.1;Parent=gene-NIV78_RS10200;Dbxref=Genbank:WP_017922930.1;Name=WP_017922930.1;Ontology_term=GO:0019580,GO:0008679;gbkey=CDS;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=galactarate metabolic process|0019580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875433.1;locus_tag=NIV78_RS10200;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_017922930.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2163596 2164630 . - . ID=gene-NIV78_RS10205;Name=NIV78_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10205 NZ_CP100136.1 Protein Homology CDS 2163596 2164630 . - 0 ID=cds-WP_017922931.1;Parent=gene-NIV78_RS10205;Dbxref=Genbank:WP_017922931.1;Name=WP_017922931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875432.1;locus_tag=NIV78_RS10205;product=type II asparaginase;protein_id=WP_017922931.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2164848 2165132 . + . ID=gene-NIV78_RS10210;Name=NIV78_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10210 NZ_CP100136.1 Protein Homology CDS 2164848 2165132 . + 0 ID=cds-WP_257756732.1;Parent=gene-NIV78_RS10210;Dbxref=Genbank:WP_257756732.1;Name=WP_257756732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602001.1;locus_tag=NIV78_RS10210;product=PsiF family protein;protein_id=WP_257756732.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2165583 2166170 . + . ID=gene-NIV78_RS10215;Name=NIV78_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10215 NZ_CP100136.1 Protein Homology CDS 2165583 2166170 . + 0 ID=cds-WP_015875430.1;Parent=gene-NIV78_RS10215;Dbxref=Genbank:WP_015875430.1;Name=WP_015875430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890687.1;locus_tag=NIV78_RS10215;product=YSC84-related protein;protein_id=WP_015875430.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2166312 2167379 . - . ID=gene-NIV78_RS10220;Name=NIV78_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10220 NZ_CP100136.1 Protein Homology CDS 2166312 2167379 . - 0 ID=cds-WP_017923369.1;Parent=gene-NIV78_RS10220;Dbxref=Genbank:WP_017923369.1;Name=WP_017923369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007181969.1;locus_tag=NIV78_RS10220;product=glycosyltransferase family 4 protein;protein_id=WP_017923369.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2167600 2168775 . - . ID=gene-NIV78_RS10225;Name=NIV78_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10225 NZ_CP100136.1 Protein Homology CDS 2167600 2168775 . - 0 ID=cds-WP_015875428.1;Parent=gene-NIV78_RS10225;Dbxref=Genbank:WP_015875428.1;Name=WP_015875428.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026187.1;locus_tag=NIV78_RS10225;product=AAA family ATPase;protein_id=WP_015875428.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2168840 2170021 . - . ID=gene-NIV78_RS10230;Name=NIV78_RS10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10230 NZ_CP100136.1 Protein Homology CDS 2168840 2170021 . - 0 ID=cds-WP_015875427.1;Parent=gene-NIV78_RS10230;Dbxref=Genbank:WP_015875427.1;Name=WP_015875427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875427.1;locus_tag=NIV78_RS10230;product=mechanosensitive ion channel;protein_id=WP_015875427.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2170156 2170512 . - . ID=gene-NIV78_RS10235;Name=NIV78_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10235 NZ_CP100136.1 Protein Homology CDS 2170156 2170512 . - 0 ID=cds-WP_015875426.1;Parent=gene-NIV78_RS10235;Dbxref=Genbank:WP_015875426.1;Name=WP_015875426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402276.1;locus_tag=NIV78_RS10235;product=hypothetical protein;protein_id=WP_015875426.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2170592 2171323 . - . ID=gene-NIV78_RS10240;Name=NIV78_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10240 NZ_CP100136.1 Protein Homology CDS 2170592 2171323 . - 0 ID=cds-WP_015875425.1;Parent=gene-NIV78_RS10240;Dbxref=Genbank:WP_015875425.1;Name=WP_015875425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423786.1;locus_tag=NIV78_RS10240;product=ankyrin repeat domain-containing protein;protein_id=WP_015875425.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2171367 2172146 . - . ID=gene-NIV78_RS10245;Name=NIV78_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10245 NZ_CP100136.1 Protein Homology CDS 2171367 2172146 . - 0 ID=cds-WP_015875424.1;Parent=gene-NIV78_RS10245;Dbxref=Genbank:WP_015875424.1;Name=WP_015875424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875424.1;locus_tag=NIV78_RS10245;product=TatD family hydrolase;protein_id=WP_015875424.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2172189 2173217 . - . ID=gene-NIV78_RS10250;Name=NIV78_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10250 NZ_CP100136.1 Protein Homology CDS 2172189 2173217 . - 0 ID=cds-WP_015875423.1;Parent=gene-NIV78_RS10250;Dbxref=Genbank:WP_015875423.1;Name=WP_015875423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352331.1;locus_tag=NIV78_RS10250;product=DNA polymerase III subunit delta';protein_id=WP_015875423.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2173274 2173894 . - . ID=gene-NIV78_RS10255;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=NIV78_RS10255 NZ_CP100136.1 Protein Homology CDS 2173274 2173894 . - 0 ID=cds-WP_015875422.1;Parent=gene-NIV78_RS10255;Dbxref=Genbank:WP_015875422.1;Name=WP_015875422.1;Ontology_term=GO:0015949,GO:0004798;gbkey=CDS;gene=tmk;go_function=thymidylate kinase activity|0004798||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521281.1;locus_tag=NIV78_RS10255;product=dTMP kinase;protein_id=WP_015875422.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2173894 2174910 . - . ID=gene-NIV78_RS10260;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=protein_coding;locus_tag=NIV78_RS10260 NZ_CP100136.1 Protein Homology CDS 2173894 2174910 . - 0 ID=cds-WP_015875421.1;Parent=gene-NIV78_RS10260;Dbxref=Genbank:WP_015875421.1;Name=WP_015875421.1;Ontology_term=GO:0009252,GO:0071555,GO:0008932;gbkey=CDS;gene=mltG;go_function=lytic endotransglycosylase activity|0008932||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601776.1;locus_tag=NIV78_RS10260;product=endolytic transglycosylase MltG;protein_id=WP_015875421.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2174988 2176019 . + . ID=gene-NIV78_RS10265;Name=NIV78_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10265 NZ_CP100136.1 Protein Homology CDS 2174988 2176019 . + 0 ID=cds-WP_015875420.1;Parent=gene-NIV78_RS10265;Dbxref=Genbank:WP_015875420.1;Name=WP_015875420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875420.1;locus_tag=NIV78_RS10265;product=folate-binding protein YgfZ;protein_id=WP_015875420.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2176108 2176953 . + . ID=gene-NIV78_RS10270;Name=NIV78_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10270 NZ_CP100136.1 Protein Homology CDS 2176108 2176953 . + 0 ID=cds-WP_015875419.1;Parent=gene-NIV78_RS10270;Dbxref=Genbank:WP_015875419.1;Name=WP_015875419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698321.1;locus_tag=NIV78_RS10270;product=NRDE family protein;protein_id=WP_015875419.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2176983 2177942 . - . ID=gene-NIV78_RS10275;Name=NIV78_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10275 NZ_CP100136.1 Protein Homology CDS 2176983 2177942 . - 0 ID=cds-WP_015875418.1;Parent=gene-NIV78_RS10275;Dbxref=Genbank:WP_015875418.1;Name=WP_015875418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875418.1;locus_tag=NIV78_RS10275;product=alpha/beta hydrolase;protein_id=WP_015875418.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2178142 2178624 . - . ID=gene-NIV78_RS10280;Name=NIV78_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10280 NZ_CP100136.1 Protein Homology CDS 2178142 2178624 . - 0 ID=cds-WP_015875417.1;Parent=gene-NIV78_RS10280;Dbxref=Genbank:WP_015875417.1;Name=WP_015875417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764138.1;locus_tag=NIV78_RS10280;product=PaaI family thioesterase;protein_id=WP_015875417.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2178918 2180096 . - . ID=gene-NIV78_RS10285;Name=NIV78_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10285 NZ_CP100136.1 Protein Homology CDS 2178918 2180096 . - 0 ID=cds-WP_015875416.1;Parent=gene-NIV78_RS10285;Dbxref=Genbank:WP_015875416.1;Name=WP_015875416.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875416.1;locus_tag=NIV78_RS10285;product=acetyl-CoA C-acyltransferase;protein_id=WP_015875416.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2180152 2180778 . - . ID=gene-NIV78_RS10290;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=NIV78_RS10290 NZ_CP100136.1 Protein Homology CDS 2180152 2180778 . - 0 ID=cds-WP_015875415.1;Parent=gene-NIV78_RS10290;Dbxref=Genbank:WP_015875415.1;Name=WP_015875415.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875415.1;locus_tag=NIV78_RS10290;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WP_015875415.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2180794 2182878 . - . ID=gene-NIV78_RS10295;Name=NIV78_RS10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10295 NZ_CP100136.1 Protein Homology CDS 2180794 2182878 . - 0 ID=cds-WP_017922869.1;Parent=gene-NIV78_RS10295;Dbxref=Genbank:WP_017922869.1;Name=WP_017922869.1;Ontology_term=GO:0006631,GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483901.1;locus_tag=NIV78_RS10295;product=3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein;protein_id=WP_017922869.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2183185 2184870 . - . ID=gene-NIV78_RS10300;Name=NIV78_RS10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10300 NZ_CP100136.1 Protein Homology CDS 2183185 2184870 . - 0 ID=cds-WP_169512450.1;Parent=gene-NIV78_RS10300;Dbxref=Genbank:WP_169512450.1;Name=WP_169512450.1;Ontology_term=GO:0016874;gbkey=CDS;go_function=ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875413.1;locus_tag=NIV78_RS10300;product=3-(methylthio)propionyl-CoA ligase;protein_id=WP_169512450.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2185023 2186588 . + . ID=gene-NIV78_RS10305;Name=NIV78_RS10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10305 NZ_CP100136.1 Protein Homology CDS 2185023 2186588 . + 0 ID=cds-WP_017922868.1;Parent=gene-NIV78_RS10305;Dbxref=Genbank:WP_017922868.1;Name=WP_017922868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657149.1;locus_tag=NIV78_RS10305;product=YdiU family protein;protein_id=WP_017922868.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2186626 2187054 . + . ID=gene-NIV78_RS10310;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=NIV78_RS10310 NZ_CP100136.1 Protein Homology CDS 2186626 2187054 . + 0 ID=cds-WP_017922867.1;Parent=gene-NIV78_RS10310;Dbxref=Genbank:WP_017922867.1;Name=WP_017922867.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875411.1;locus_tag=NIV78_RS10310;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_017922867.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2187175 2187705 . + . ID=gene-NIV78_RS10315;Name=NIV78_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10315 NZ_CP100136.1 Protein Homology CDS 2187175 2187705 . + 0 ID=cds-WP_017922866.1;Parent=gene-NIV78_RS10315;Dbxref=Genbank:WP_017922866.1;Name=WP_017922866.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904993.1;locus_tag=NIV78_RS10315;product=septation protein A;protein_id=WP_017922866.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2187708 2188016 . + . ID=gene-NIV78_RS10320;Name=NIV78_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10320 NZ_CP100136.1 Protein Homology CDS 2187708 2188016 . + 0 ID=cds-WP_035980172.1;Parent=gene-NIV78_RS10320;Dbxref=Genbank:WP_035980172.1;Name=WP_035980172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007585924.1;locus_tag=NIV78_RS10320;product=BolA family transcriptional regulator;protein_id=WP_035980172.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2188042 2188821 . + . ID=gene-NIV78_RS10325;Name=NIV78_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10325 NZ_CP100136.1 Protein Homology CDS 2188042 2188821 . + 0 ID=cds-WP_015875408.1;Parent=gene-NIV78_RS10325;Dbxref=Genbank:WP_015875408.1;Name=WP_015875408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601097.1;locus_tag=NIV78_RS10325;product=peptidylprolyl isomerase;protein_id=WP_015875408.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 2188908 2189470 . - . ID=gene-NIV78_RS10330;Name=NIV78_RS10330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS10330;pseudo=true NZ_CP100136.1 Protein Homology CDS 2188908 2189470 . - 0 ID=cds-NIV78_RS10330;Parent=gene-NIV78_RS10330;Note=frameshifted;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885049.1;locus_tag=NIV78_RS10330;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 2189530 2189874 . - . ID=gene-NIV78_RS10335;Name=NIV78_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10335 NZ_CP100136.1 GeneMarkS-2+ CDS 2189530 2189874 . - 0 ID=cds-WP_251107368.1;Parent=gene-NIV78_RS10335;Dbxref=Genbank:WP_251107368.1;Name=WP_251107368.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS10335;product=hypothetical protein;protein_id=WP_251107368.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2189889 2191748 . - . ID=gene-NIV78_RS10340;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=NIV78_RS10340 NZ_CP100136.1 Protein Homology CDS 2189889 2191748 . - 0 ID=cds-WP_015875407.1;Parent=gene-NIV78_RS10340;Dbxref=Genbank:WP_015875407.1;Name=WP_015875407.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013952014.1;locus_tag=NIV78_RS10340;product=dihydroxy-acid dehydratase;protein_id=WP_015875407.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2191936 2196003 . - . ID=gene-NIV78_RS10345;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=NIV78_RS10345 NZ_CP100136.1 Protein Homology CDS 2191936 2196003 . - 0 ID=cds-WP_257757400.1;Parent=gene-NIV78_RS10345;Dbxref=Genbank:WP_257757400.1;Name=WP_257757400.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213195.1;locus_tag=NIV78_RS10345;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_257757400.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2196315 2197619 . + . ID=gene-NIV78_RS10350;Name=NIV78_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10350 NZ_CP100136.1 Protein Homology CDS 2196315 2197619 . + 0 ID=cds-WP_015875405.1;Parent=gene-NIV78_RS10350;Dbxref=Genbank:WP_015875405.1;Name=WP_015875405.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527209.1;locus_tag=NIV78_RS10350;product=FAD-dependent oxidoreductase;protein_id=WP_015875405.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2197675 2199279 . + . ID=gene-NIV78_RS10355;Name=NIV78_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10355 NZ_CP100136.1 Protein Homology CDS 2197675 2199279 . + 0 ID=cds-WP_257756735.1;Parent=gene-NIV78_RS10355;Dbxref=Genbank:WP_257756735.1;Name=WP_257756735.1;Ontology_term=GO:0052855;gbkey=CDS;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875404.1;locus_tag=NIV78_RS10355;product=NAD(P)H-hydrate dehydratase;protein_id=WP_257756735.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2199409 2201031 . + . ID=gene-NIV78_RS10360;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=NIV78_RS10360 NZ_CP100136.1 Protein Homology CDS 2199409 2201031 . + 0 ID=cds-WP_015875403.1;Parent=gene-NIV78_RS10360;Dbxref=Genbank:WP_015875403.1;Name=WP_015875403.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332014.1;locus_tag=NIV78_RS10360;product=glucose-6-phosphate isomerase;protein_id=WP_015875403.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2201112 2201837 . - . ID=gene-NIV78_RS10365;Name=NIV78_RS10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10365 NZ_CP100136.1 Protein Homology CDS 2201112 2201837 . - 0 ID=cds-WP_043226779.1;Parent=gene-NIV78_RS10365;Dbxref=Genbank:WP_043226779.1;Name=WP_043226779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875402.1;locus_tag=NIV78_RS10365;product=ABC transporter ATP-binding protein;protein_id=WP_043226779.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2201821 2202522 . + . ID=gene-NIV78_RS10370;Name=NIV78_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10370 NZ_CP100136.1 Protein Homology CDS 2201821 2202522 . + 0 ID=cds-WP_080569360.1;Parent=gene-NIV78_RS10370;Dbxref=Genbank:WP_080569360.1;Name=WP_080569360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011402277.1;locus_tag=NIV78_RS10370;product=arylesterase;protein_id=WP_080569360.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2202648 2204591 . - . ID=gene-NIV78_RS10375;Name=NIV78_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10375 NZ_CP100136.1 Protein Homology CDS 2202648 2204591 . - 0 ID=cds-WP_017423016.1;Parent=gene-NIV78_RS10375;Dbxref=Genbank:WP_017423016.1;Name=WP_017423016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423016.1;locus_tag=NIV78_RS10375;product=SurA N-terminal domain-containing protein;protein_id=WP_017423016.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2204997 2205073 . - . ID=gene-NIV78_RS10380;Name=NIV78_RS10380;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS10380 NZ_CP100136.1 tRNAscan-SE tRNA 2204997 2205073 . - . ID=rna-NIV78_RS10380;Parent=gene-NIV78_RS10380;anticodon=(pos:complement(2205037..2205039));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS10380;product=tRNA-Asp NZ_CP100136.1 tRNAscan-SE exon 2204997 2205073 . - . ID=exon-NIV78_RS10380-1;Parent=rna-NIV78_RS10380;anticodon=(pos:complement(2205037..2205039));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS10380;product=tRNA-Asp NZ_CP100136.1 RefSeq gene 2205818 2207017 . + . ID=gene-NIV78_RS10385;Name=NIV78_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10385 NZ_CP100136.1 Protein Homology CDS 2205818 2207017 . + 0 ID=cds-WP_017423015.1;Parent=gene-NIV78_RS10385;Dbxref=Genbank:WP_017423015.1;Name=WP_017423015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875399.1;locus_tag=NIV78_RS10385;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=WP_017423015.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2207166 2207837 . + . ID=gene-NIV78_RS10390;Name=NIV78_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10390 NZ_CP100136.1 Protein Homology CDS 2207166 2207837 . + 0 ID=cds-WP_015875398.1;Parent=gene-NIV78_RS10390;Dbxref=Genbank:WP_015875398.1;Name=WP_015875398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875398.1;locus_tag=NIV78_RS10390;product=alpha/beta hydrolase;protein_id=WP_015875398.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2207992 2208067 . - . ID=gene-NIV78_RS10395;Name=NIV78_RS10395;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS10395 NZ_CP100136.1 tRNAscan-SE tRNA 2207992 2208067 . - . ID=rna-NIV78_RS10395;Parent=gene-NIV78_RS10395;anticodon=(pos:complement(2208032..2208034));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS10395;product=tRNA-Val NZ_CP100136.1 tRNAscan-SE exon 2207992 2208067 . - . ID=exon-NIV78_RS10395-1;Parent=rna-NIV78_RS10395;anticodon=(pos:complement(2208032..2208034));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS10395;product=tRNA-Val NZ_CP100136.1 RefSeq gene 2208137 2208409 . - . ID=gene-NIV78_RS10400;Name=NIV78_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10400 NZ_CP100136.1 Protein Homology CDS 2208137 2208409 . - 0 ID=cds-WP_015875397.1;Parent=gene-NIV78_RS10400;Dbxref=Genbank:WP_015875397.1;Name=WP_015875397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014191280.1;locus_tag=NIV78_RS10400;product=HU family DNA-binding protein;protein_id=WP_015875397.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2208620 2211037 . - . ID=gene-NIV78_RS10405;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=NIV78_RS10405 NZ_CP100136.1 Protein Homology CDS 2208620 2211037 . - 0 ID=cds-WP_015875396.1;Parent=gene-NIV78_RS10405;Dbxref=Genbank:WP_015875396.1;Name=WP_015875396.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007585905.1;locus_tag=NIV78_RS10405;product=endopeptidase La;protein_id=WP_015875396.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2211236 2212507 . - . ID=gene-NIV78_RS10410;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=NIV78_RS10410 NZ_CP100136.1 Protein Homology CDS 2211236 2212507 . - 0 ID=cds-WP_015875395.1;Parent=gene-NIV78_RS10410;Dbxref=Genbank:WP_015875395.1;Name=WP_015875395.1;Ontology_term=GO:0005524,GO:0008270,GO:0016887,GO:0046983;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,ATP hydrolysis activity|0016887||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521258.1;locus_tag=NIV78_RS10410;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_015875395.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2212663 2213316 . - . ID=gene-NIV78_RS10415;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=NIV78_RS10415 NZ_CP100136.1 Protein Homology CDS 2212663 2213316 . - 0 ID=cds-WP_015875394.1;Parent=gene-NIV78_RS10415;Dbxref=Genbank:WP_015875394.1;Name=WP_015875394.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026149.1;locus_tag=NIV78_RS10415;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_015875394.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2213459 2214805 . - . ID=gene-NIV78_RS10420;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=NIV78_RS10420 NZ_CP100136.1 Protein Homology CDS 2213459 2214805 . - 0 ID=cds-WP_015875393.1;Parent=gene-NIV78_RS10420;Dbxref=Genbank:WP_015875393.1;Name=WP_015875393.1;Ontology_term=GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process='de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004539679.1;locus_tag=NIV78_RS10420;product=trigger factor;protein_id=WP_015875393.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2215255 2216409 . + . ID=gene-NIV78_RS10425;Name=NIV78_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10425 NZ_CP100136.1 Protein Homology CDS 2215255 2216409 . + 0 ID=cds-WP_251107366.1;Parent=gene-NIV78_RS10425;Dbxref=Genbank:WP_251107366.1;Name=WP_251107366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875392.1;locus_tag=NIV78_RS10425;product=glycerate kinase;protein_id=WP_251107366.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2216464 2216913 . + . ID=gene-NIV78_RS10430;Name=NIV78_RS10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10430 NZ_CP100136.1 Protein Homology CDS 2216464 2216913 . + 0 ID=cds-WP_017923602.1;Parent=gene-NIV78_RS10430;Dbxref=Genbank:WP_017923602.1;Name=WP_017923602.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192378.1;locus_tag=NIV78_RS10430;product=MarR family transcriptional regulator;protein_id=WP_017923602.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2217804 2218163 . + . ID=gene-NIV78_RS10435;Name=NIV78_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10435 NZ_CP100136.1 Protein Homology CDS 2217804 2218163 . + 0 ID=cds-WP_043226285.1;Parent=gene-NIV78_RS10435;Dbxref=Genbank:WP_043226285.1;Name=WP_043226285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749572.1;locus_tag=NIV78_RS10435;product=BON domain-containing protein;protein_id=WP_043226285.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2218246 2218443 . + . ID=gene-NIV78_RS10440;Name=NIV78_RS10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10440 NZ_CP100136.1 Protein Homology CDS 2218246 2218443 . + 0 ID=cds-WP_015875389.1;Parent=gene-NIV78_RS10440;Dbxref=Genbank:WP_015875389.1;Name=WP_015875389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397770.1;locus_tag=NIV78_RS10440;product=CsbD family protein;protein_id=WP_015875389.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2219037 2219927 . - . ID=gene-NIV78_RS10445;Name=NIV78_RS10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10445 NZ_CP100136.1 Protein Homology CDS 2219037 2219927 . - 0 ID=cds-WP_017923599.1;Parent=gene-NIV78_RS10445;Dbxref=Genbank:WP_017923599.1;Name=WP_017923599.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875388.1;locus_tag=NIV78_RS10445;product=prolyl oligopeptidase family serine peptidase;protein_id=WP_017923599.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2220133 2220396 . - . ID=gene-NIV78_RS10450;Name=NIV78_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10450 NZ_CP100136.1 Protein Homology CDS 2220133 2220396 . - 0 ID=cds-WP_241766893.1;Parent=gene-NIV78_RS10450;Dbxref=Genbank:WP_241766893.1;Name=WP_241766893.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=NIV78_RS10450;product=response regulator;protein_id=WP_241766893.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2220403 2220927 . - . ID=gene-NIV78_RS10455;Name=NIV78_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10455 NZ_CP100136.1 GeneMarkS-2+ CDS 2220403 2220927 . - 0 ID=cds-WP_232252263.1;Parent=gene-NIV78_RS10455;Dbxref=Genbank:WP_232252263.1;Name=WP_232252263.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS10455;product=hypothetical protein;protein_id=WP_232252263.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2221168 2221302 . - . ID=gene-NIV78_RS10460;Name=NIV78_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10460 NZ_CP100136.1 GeneMarkS-2+ CDS 2221168 2221302 . - 0 ID=cds-WP_017922940.1;Parent=gene-NIV78_RS10460;Dbxref=Genbank:WP_017922940.1;Name=WP_017922940.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS10460;product=hypothetical protein;protein_id=WP_017922940.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2221376 2221690 . + . ID=gene-NIV78_RS10465;Name=NIV78_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10465 NZ_CP100136.1 GeneMarkS-2+ CDS 2221376 2221690 . + 0 ID=cds-WP_251107365.1;Parent=gene-NIV78_RS10465;Dbxref=Genbank:WP_251107365.1;Name=WP_251107365.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS10465;product=hypothetical protein;protein_id=WP_251107365.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2222131 2222379 . + . ID=gene-NIV78_RS10470;Name=NIV78_RS10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10470 NZ_CP100136.1 GeneMarkS-2+ CDS 2222131 2222379 . + 0 ID=cds-WP_171466575.1;Parent=gene-NIV78_RS10470;Dbxref=Genbank:WP_171466575.1;Name=WP_171466575.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS10470;product=hypothetical protein;protein_id=WP_171466575.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2222773 2223642 . + . ID=gene-NIV78_RS10475;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=NIV78_RS10475 NZ_CP100136.1 Protein Homology CDS 2222773 2223642 . + 0 ID=cds-WP_015875387.1;Parent=gene-NIV78_RS10475;Dbxref=Genbank:WP_015875387.1;Name=WP_015875387.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012403499.1;locus_tag=NIV78_RS10475;product=flagellar motor stator protein MotA;protein_id=WP_015875387.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2223654 2224592 . + . ID=gene-NIV78_RS10480;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=NIV78_RS10480 NZ_CP100136.1 Protein Homology CDS 2223654 2224592 . + 0 ID=cds-WP_257756740.1;Parent=gene-NIV78_RS10480;Dbxref=Genbank:WP_257756740.1;Name=WP_257756740.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875386.1;locus_tag=NIV78_RS10480;product=flagellar motor protein MotB;protein_id=WP_257756740.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 2224726 2224914 . + . ID=gene-NIV78_RS10485;Name=NIV78_RS10485;end_range=2224914,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS10485;partial=true;pseudo=true;start_range=.,2224726 NZ_CP100136.1 Protein Homology CDS 2224726 2224914 . + 0 ID=cds-NIV78_RS10485;Parent=gene-NIV78_RS10485;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2224914,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018420717.1;locus_tag=NIV78_RS10485;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,2224726;transl_table=11 NZ_CP100136.1 RefSeq gene 2225389 2225475 . - . ID=gene-NIV78_RS10490;Name=NIV78_RS10490;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS10490 NZ_CP100136.1 tRNAscan-SE tRNA 2225389 2225475 . - . ID=rna-NIV78_RS10490;Parent=gene-NIV78_RS10490;anticodon=(pos:complement(2225439..2225441));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS10490;product=tRNA-Leu NZ_CP100136.1 tRNAscan-SE exon 2225389 2225475 . - . ID=exon-NIV78_RS10490-1;Parent=rna-NIV78_RS10490;anticodon=(pos:complement(2225439..2225441));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS10490;product=tRNA-Leu NZ_CP100136.1 RefSeq gene 2225710 2226549 . + . ID=gene-NIV78_RS10495;Name=hpnD;gbkey=Gene;gene=hpnD;gene_biotype=protein_coding;locus_tag=NIV78_RS10495 NZ_CP100136.1 Protein Homology CDS 2225710 2226549 . + 0 ID=cds-WP_015875385.1;Parent=gene-NIV78_RS10495;Dbxref=Genbank:WP_015875385.1;Name=WP_015875385.1;Ontology_term=GO:0016117,GO:0016767;gbkey=CDS;gene=hpnD;go_function=geranylgeranyl-diphosphate geranylgeranyltransferase activity|0016767||IEA;go_process=carotenoid biosynthetic process|0016117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009980658.1;locus_tag=NIV78_RS10495;product=presqualene diphosphate synthase HpnD;protein_id=WP_015875385.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2226616 2227824 . - . ID=gene-NIV78_RS10500;Name=NIV78_RS10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10500 NZ_CP100136.1 Protein Homology CDS 2226616 2227824 . - 0 ID=cds-WP_015875384.1;Parent=gene-NIV78_RS10500;Dbxref=Genbank:WP_015875384.1;Name=WP_015875384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004550279.1;locus_tag=NIV78_RS10500;product=DUF1501 domain-containing protein;protein_id=WP_015875384.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2227911 2229392 . - . ID=gene-NIV78_RS10505;Name=NIV78_RS10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10505 NZ_CP100136.1 Protein Homology CDS 2227911 2229392 . - 0 ID=cds-WP_017922938.1;Parent=gene-NIV78_RS10505;Dbxref=Genbank:WP_017922938.1;Name=WP_017922938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875383.1;locus_tag=NIV78_RS10505;product=DUF1800 domain-containing protein;protein_id=WP_017922938.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2229768 2230064 . - . ID=gene-NIV78_RS10510;Name=NIV78_RS10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10510 NZ_CP100136.1 Protein Homology CDS 2229768 2230064 . - 0 ID=cds-WP_015875382.1;Parent=gene-NIV78_RS10510;Dbxref=Genbank:WP_015875382.1;Name=WP_015875382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026135.1;locus_tag=NIV78_RS10510;product=hypothetical protein;protein_id=WP_015875382.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2230333 2231058 . + . ID=gene-NIV78_RS10515;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=NIV78_RS10515 NZ_CP100136.1 Protein Homology CDS 2230333 2231058 . + 0 ID=cds-WP_004199523.1;Parent=gene-NIV78_RS10515;Dbxref=Genbank:WP_004199523.1;Name=WP_004199523.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009517537.1;locus_tag=NIV78_RS10515;product=two-component system response regulator OmpR;protein_id=WP_004199523.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2231134 2232498 . + . ID=gene-NIV78_RS10520;Name=NIV78_RS10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10520 NZ_CP100136.1 Protein Homology CDS 2231134 2232498 . + 0 ID=cds-WP_015875380.1;Parent=gene-NIV78_RS10520;Dbxref=Genbank:WP_015875380.1;Name=WP_015875380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875380.1;locus_tag=NIV78_RS10520;product=ATP-binding protein;protein_id=WP_015875380.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2232649 2233134 . - . ID=gene-NIV78_RS10525;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=NIV78_RS10525 NZ_CP100136.1 Protein Homology CDS 2232649 2233134 . - 0 ID=cds-WP_015875379.1;Parent=gene-NIV78_RS10525;Dbxref=Genbank:WP_015875379.1;Name=WP_015875379.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364088.1;locus_tag=NIV78_RS10525;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_015875379.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2233163 2233873 . - . ID=gene-NIV78_RS10530;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=NIV78_RS10530 NZ_CP100136.1 Protein Homology CDS 2233163 2233873 . - 0 ID=cds-WP_015875378.1;Parent=gene-NIV78_RS10530;Dbxref=Genbank:WP_015875378.1;Name=WP_015875378.1;Ontology_term=GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402218.1;locus_tag=NIV78_RS10530;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_015875378.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2233990 2237463 . + . ID=gene-NIV78_RS10535;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=NIV78_RS10535 NZ_CP100136.1 Protein Homology CDS 2233990 2237463 . + 0 ID=cds-WP_015875377.1;Parent=gene-NIV78_RS10535;Dbxref=Genbank:WP_015875377.1;Name=WP_015875377.1;Ontology_term=GO:0006281,GO:0003690,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=mfd;go_function=double-stranded DNA binding|0003690||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600462.1;locus_tag=NIV78_RS10535;product=transcription-repair coupling factor;protein_id=WP_015875377.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2237662 2238879 . + . ID=gene-NIV78_RS10540;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=NIV78_RS10540 NZ_CP100136.1 Protein Homology CDS 2237662 2238879 . + 0 ID=cds-WP_251107364.1;Parent=gene-NIV78_RS10540;Dbxref=Genbank:WP_251107364.1;Name=WP_251107364.1;Ontology_term=GO:0006592,GO:0008777;gbkey=CDS;gene=argE;go_function=acetylornithine deacetylase activity|0008777||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004534727.1;locus_tag=NIV78_RS10540;product=acetylornithine deacetylase;protein_id=WP_251107364.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2238927 2239955 . + . ID=gene-NIV78_RS10545;Name=NIV78_RS10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10545 NZ_CP100136.1 Protein Homology CDS 2238927 2239955 . + 0 ID=cds-WP_017922766.1;Parent=gene-NIV78_RS10545;Dbxref=Genbank:WP_017922766.1;Name=WP_017922766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875375.1;locus_tag=NIV78_RS10545;product=pyridoxal-phosphate dependent enzyme;protein_id=WP_017922766.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2240340 2242856 . - . ID=gene-NIV78_RS10550;Name=NIV78_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10550 NZ_CP100136.1 Protein Homology CDS 2240340 2242856 . - 0 ID=cds-WP_017922767.1;Parent=gene-NIV78_RS10550;Dbxref=Genbank:WP_017922767.1;Name=WP_017922767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011402255.1;locus_tag=NIV78_RS10550;product=penicillin-binding protein 1A;protein_id=WP_017922767.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2243492 2244172 . + . ID=gene-NIV78_RS10555;Name=NIV78_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10555 NZ_CP100136.1 Protein Homology CDS 2243492 2244172 . + 0 ID=cds-WP_015875373.1;Parent=gene-NIV78_RS10555;Dbxref=Genbank:WP_015875373.1;Name=WP_015875373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193810.1;locus_tag=NIV78_RS10555;product=PspA/IM30 family protein;protein_id=WP_015875373.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2244262 2245503 . + . ID=gene-NIV78_RS10560;Name=NIV78_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10560 NZ_CP100136.1 Protein Homology CDS 2244262 2245503 . + 0 ID=cds-WP_017922769.1;Parent=gene-NIV78_RS10560;Dbxref=Genbank:WP_017922769.1;Name=WP_017922769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423431.1;locus_tag=NIV78_RS10560;product=tetratricopeptide repeat protein;protein_id=WP_017922769.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2245745 2246188 . + . ID=gene-NIV78_RS10565;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=NIV78_RS10565 NZ_CP100136.1 Protein Homology CDS 2245745 2246188 . + 0 ID=cds-WP_015875371.1;Parent=gene-NIV78_RS10565;Dbxref=Genbank:WP_015875371.1;Name=WP_015875371.1;Ontology_term=GO:0034220,GO:0008381,GO:0016021;gbkey=CDS;gene=mscL;go_component=integral component of membrane|0016021||IEA;go_function=mechanosensitive ion channel activity|0008381||IEA;go_process=ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875371.1;locus_tag=NIV78_RS10565;product=large conductance mechanosensitive channel protein MscL;protein_id=WP_015875371.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2246601 2247035 . + . ID=gene-NIV78_RS10570;Name=NIV78_RS10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10570 NZ_CP100136.1 Protein Homology CDS 2246601 2247035 . + 0 ID=cds-WP_015875370.1;Parent=gene-NIV78_RS10570;Dbxref=Genbank:WP_015875370.1;Name=WP_015875370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890525.1;locus_tag=NIV78_RS10570;product=hypothetical protein;protein_id=WP_015875370.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2247443 2247652 . + . ID=gene-NIV78_RS10575;Name=NIV78_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10575 NZ_CP100136.1 Protein Homology CDS 2247443 2247652 . + 0 ID=cds-WP_017423432.1;Parent=gene-NIV78_RS10575;Dbxref=Genbank:WP_017423432.1;Name=WP_017423432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331911.1;locus_tag=NIV78_RS10575;product=dodecin family protein;protein_id=WP_017423432.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2247877 2248806 . + . ID=gene-NIV78_RS10580;Name=NIV78_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10580 NZ_CP100136.1 Protein Homology CDS 2247877 2248806 . + 0 ID=cds-WP_015875368.1;Parent=gene-NIV78_RS10580;Dbxref=Genbank:WP_015875368.1;Name=WP_015875368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490213.1;locus_tag=NIV78_RS10580;product=LysR substrate-binding domain-containing protein;protein_id=WP_015875368.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2248828 2250255 . - . ID=gene-NIV78_RS10585;Name=NIV78_RS10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10585 NZ_CP100136.1 Protein Homology CDS 2248828 2250255 . - 0 ID=cds-WP_017922770.1;Parent=gene-NIV78_RS10585;Dbxref=Genbank:WP_017922770.1;Name=WP_017922770.1;Ontology_term=GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423433.1;locus_tag=NIV78_RS10585;product=8-oxoguanine deaminase;protein_id=WP_017922770.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2250755 2251108 . + . ID=gene-NIV78_RS10590;Name=uraH;gbkey=Gene;gene=uraH;gene_biotype=protein_coding;locus_tag=NIV78_RS10590 NZ_CP100136.1 Protein Homology CDS 2250755 2251108 . + 0 ID=cds-WP_015875366.1;Parent=gene-NIV78_RS10590;Dbxref=Genbank:WP_015875366.1;Name=WP_015875366.1;Ontology_term=GO:0019628;gbkey=CDS;gene=uraH;go_process=urate catabolic process|0019628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521222.1;locus_tag=NIV78_RS10590;product=hydroxyisourate hydrolase;protein_id=WP_015875366.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2251180 2252373 . + . ID=gene-NIV78_RS10595;Name=NIV78_RS10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10595 NZ_CP100136.1 Protein Homology CDS 2251180 2252373 . + 0 ID=cds-WP_017922771.1;Parent=gene-NIV78_RS10595;Dbxref=Genbank:WP_017922771.1;Name=WP_017922771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521221.1;locus_tag=NIV78_RS10595;product=urate hydroxylase PuuD;protein_id=WP_017922771.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2252776 2255973 . + . ID=gene-NIV78_RS10600;Name=NIV78_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10600 NZ_CP100136.1 Protein Homology CDS 2252776 2255973 . + 0 ID=cds-WP_251107363.1;Parent=gene-NIV78_RS10600;Dbxref=Genbank:WP_251107363.1;Name=WP_251107363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691455.1;locus_tag=NIV78_RS10600;product=EAL domain-containing protein;protein_id=WP_251107363.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2256049 2256561 . - . ID=gene-NIV78_RS10605;Name=NIV78_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10605 NZ_CP100136.1 Protein Homology CDS 2256049 2256561 . - 0 ID=cds-WP_017923539.1;Parent=gene-NIV78_RS10605;Dbxref=Genbank:WP_017923539.1;Name=WP_017923539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193471.1;locus_tag=NIV78_RS10605;product=ureidoglycolate lyase;protein_id=WP_017923539.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2256558 2257571 . - . ID=gene-NIV78_RS10610;Name=alc;gbkey=Gene;gene=alc;gene_biotype=protein_coding;locus_tag=NIV78_RS10610 NZ_CP100136.1 Protein Homology CDS 2256558 2257571 . - 0 ID=cds-WP_017923540.1;Parent=gene-NIV78_RS10610;Dbxref=Genbank:WP_017923540.1;Name=WP_017923540.1;Ontology_term=GO:0000256,GO:0004037;gbkey=CDS;gene=alc;go_function=allantoicase activity|0004037||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009909169.1;locus_tag=NIV78_RS10610;product=allantoicase;protein_id=WP_017923540.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2257688 2258209 . - . ID=gene-NIV78_RS10615;Name=uraD;gbkey=Gene;gene=uraD;gene_biotype=protein_coding;locus_tag=NIV78_RS10615 NZ_CP100136.1 Protein Homology CDS 2257688 2258209 . - 0 ID=cds-WP_015875362.1;Parent=gene-NIV78_RS10615;Dbxref=Genbank:WP_015875362.1;Name=WP_015875362.1;Ontology_term=GO:0019628;gbkey=CDS;gene=uraD;go_process=urate catabolic process|0019628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364104.1;locus_tag=NIV78_RS10615;product=2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase;protein_id=WP_015875362.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2258206 2259159 . - . ID=gene-NIV78_RS10620;Name=puuE;gbkey=Gene;gene=puuE;gene_biotype=protein_coding;locus_tag=NIV78_RS10620 NZ_CP100136.1 Protein Homology CDS 2258206 2259159 . - 0 ID=cds-WP_015875361.1;Parent=gene-NIV78_RS10620;Dbxref=Genbank:WP_015875361.1;Name=WP_015875361.1;Ontology_term=GO:0000256,GO:0016810;gbkey=CDS;gene=puuE;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407670.1;locus_tag=NIV78_RS10620;product=allantoinase PuuE;protein_id=WP_015875361.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2259316 2260164 . - . ID=gene-NIV78_RS10625;Name=NIV78_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10625 NZ_CP100136.1 Protein Homology CDS 2259316 2260164 . - 0 ID=cds-WP_251107362.1;Parent=gene-NIV78_RS10625;Dbxref=Genbank:WP_251107362.1;Name=WP_251107362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875360.1;locus_tag=NIV78_RS10625;product=aspartate/glutamate racemase family protein;protein_id=WP_251107362.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2260179 2261663 . - . ID=gene-NIV78_RS10630;Name=NIV78_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10630 NZ_CP100136.1 Protein Homology CDS 2260179 2261663 . - 0 ID=cds-WP_015875359.1;Parent=gene-NIV78_RS10630;Dbxref=Genbank:WP_015875359.1;Name=WP_015875359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875359.1;locus_tag=NIV78_RS10630;product=NCS1 family nucleobase:cation symporter-1;protein_id=WP_015875359.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2261815 2262507 . - . ID=gene-NIV78_RS10635;Name=NIV78_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10635 NZ_CP100136.1 Protein Homology CDS 2261815 2262507 . - 0 ID=cds-WP_035983588.1;Parent=gene-NIV78_RS10635;Dbxref=Genbank:WP_035983588.1;Name=WP_035983588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004540119.1;locus_tag=NIV78_RS10635;product=GntR family transcriptional regulator;protein_id=WP_035983588.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2262831 2263772 . - . ID=gene-NIV78_RS10640;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=NIV78_RS10640 NZ_CP100136.1 Protein Homology CDS 2262831 2263772 . - 0 ID=cds-WP_017423192.1;Parent=gene-NIV78_RS10640;Dbxref=Genbank:WP_017423192.1;Name=WP_017423192.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423192.1;locus_tag=NIV78_RS10640;product=muramoyltetrapeptide carboxypeptidase;protein_id=WP_017423192.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2263843 2264451 . - . ID=gene-NIV78_RS10645;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=NIV78_RS10645 NZ_CP100136.1 Protein Homology CDS 2263843 2264451 . - 0 ID=cds-WP_169511914.1;Parent=gene-NIV78_RS10645;Dbxref=Genbank:WP_169511914.1;Name=WP_169511914.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875356.1;locus_tag=NIV78_RS10645;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_169511914.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2264448 2264849 . - . ID=gene-NIV78_RS10650;Name=NIV78_RS10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10650 NZ_CP100136.1 Protein Homology CDS 2264448 2264849 . - 0 ID=cds-WP_015875355.1;Parent=gene-NIV78_RS10650;Dbxref=Genbank:WP_015875355.1;Name=WP_015875355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875355.1;locus_tag=NIV78_RS10650;product=DUF1992 domain-containing protein;protein_id=WP_015875355.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2264962 2265192 . + . ID=gene-NIV78_RS10655;Name=NIV78_RS10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10655 NZ_CP100136.1 Protein Homology CDS 2264962 2265192 . + 0 ID=cds-WP_232734531.1;Parent=gene-NIV78_RS10655;Dbxref=Genbank:WP_232734531.1;Name=WP_232734531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423194.1;locus_tag=NIV78_RS10655;product=hypothetical protein;protein_id=WP_232734531.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2265495 2266277 . - . ID=gene-NIV78_RS10660;Name=NIV78_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10660 NZ_CP100136.1 Protein Homology CDS 2265495 2266277 . - 0 ID=cds-WP_015875354.1;Parent=gene-NIV78_RS10660;Dbxref=Genbank:WP_015875354.1;Name=WP_015875354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659833.1;locus_tag=NIV78_RS10660;product=aldolase;protein_id=WP_015875354.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2266381 2266965 . + . ID=gene-NIV78_RS10665;Name=NIV78_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10665 NZ_CP100136.1 Protein Homology CDS 2266381 2266965 . + 0 ID=cds-WP_017923134.1;Parent=gene-NIV78_RS10665;Dbxref=Genbank:WP_017923134.1;Name=WP_017923134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875353.1;locus_tag=NIV78_RS10665;product=XRE family transcriptional regulator;protein_id=WP_017923134.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2267388 2268863 . + . ID=gene-NIV78_RS10670;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=NIV78_RS10670 NZ_CP100136.1 Protein Homology CDS 2267388 2268863 . + 0 ID=cds-WP_015875352.1;Parent=gene-NIV78_RS10670;Dbxref=Genbank:WP_015875352.1;Name=WP_015875352.1;Ontology_term=GO:0006098,GO:0004345;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900918.1;locus_tag=NIV78_RS10670;product=glucose-6-phosphate dehydrogenase;protein_id=WP_015875352.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2268993 2270438 . - . ID=gene-NIV78_RS10675;Name=NIV78_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10675 NZ_CP100136.1 Protein Homology CDS 2268993 2270438 . - 0 ID=cds-WP_015875351.1;Parent=gene-NIV78_RS10675;Dbxref=Genbank:WP_015875351.1;Name=WP_015875351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875351.1;locus_tag=NIV78_RS10675;product=cytosine permease;protein_id=WP_015875351.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2270694 2271449 . - . ID=gene-NIV78_RS10680;Name=NIV78_RS10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10680 NZ_CP100136.1 Protein Homology CDS 2270694 2271449 . - 0 ID=cds-WP_017923135.1;Parent=gene-NIV78_RS10680;Dbxref=Genbank:WP_017923135.1;Name=WP_017923135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875350.1;locus_tag=NIV78_RS10680;product=DUF72 domain-containing protein;protein_id=WP_017923135.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2271640 2273259 . - . ID=gene-NIV78_RS10685;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=NIV78_RS10685 NZ_CP100136.1 Protein Homology CDS 2271640 2273259 . - 0 ID=cds-WP_015875349.1;Parent=gene-NIV78_RS10685;Dbxref=Genbank:WP_015875349.1;Name=WP_015875349.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402676.1;locus_tag=NIV78_RS10685;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_015875349.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2273408 2274052 . - . ID=gene-NIV78_RS10690;Name=NIV78_RS10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10690 NZ_CP100136.1 Protein Homology CDS 2273408 2274052 . - 0 ID=cds-WP_251107361.1;Parent=gene-NIV78_RS10690;Dbxref=Genbank:WP_251107361.1;Name=WP_251107361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875348.1;locus_tag=NIV78_RS10690;product=hypothetical protein;protein_id=WP_251107361.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2274059 2275519 . - . ID=gene-NIV78_RS10695;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=NIV78_RS10695 NZ_CP100136.1 Protein Homology CDS 2274059 2275519 . - 0 ID=cds-WP_017924084.1;Parent=gene-NIV78_RS10695;Dbxref=Genbank:WP_017924084.1;Name=WP_017924084.1;Ontology_term=GO:0009152,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020065652.1;locus_tag=NIV78_RS10695;product=IMP dehydrogenase;protein_id=WP_017924084.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2275875 2276819 . + . ID=gene-NIV78_RS10700;Name=NIV78_RS10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10700 NZ_CP100136.1 Protein Homology CDS 2275875 2276819 . + 0 ID=cds-WP_017924083.1;Parent=gene-NIV78_RS10700;Dbxref=Genbank:WP_017924083.1;Name=WP_017924083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010104517.1;locus_tag=NIV78_RS10700;product=DMT family transporter;protein_id=WP_017924083.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2277033 2277356 . - . ID=gene-NIV78_RS10705;Name=NIV78_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10705 NZ_CP100136.1 Protein Homology CDS 2277033 2277356 . - 0 ID=cds-WP_015875346.1;Parent=gene-NIV78_RS10705;Dbxref=Genbank:WP_015875346.1;Name=WP_015875346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890481.1;locus_tag=NIV78_RS10705;product=RnfH family protein;protein_id=WP_015875346.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2277359 2277796 . - . ID=gene-NIV78_RS10710;Name=NIV78_RS10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10710 NZ_CP100136.1 Protein Homology CDS 2277359 2277796 . - 0 ID=cds-WP_015875345.1;Parent=gene-NIV78_RS10710;Dbxref=Genbank:WP_015875345.1;Name=WP_015875345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904866.1;locus_tag=NIV78_RS10710;product=type II toxin-antitoxin system RatA family toxin;protein_id=WP_015875345.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2277891 2278346 . + . ID=gene-NIV78_RS10715;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=NIV78_RS10715 NZ_CP100136.1 Protein Homology CDS 2277891 2278346 . + 0 ID=cds-WP_015875344.1;Parent=gene-NIV78_RS10715;Dbxref=Genbank:WP_015875344.1;Name=WP_015875344.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698495.1;locus_tag=NIV78_RS10715;product=SsrA-binding protein SmpB;protein_id=WP_015875344.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2278462 2279394 . - . ID=gene-NIV78_RS10720;Name=NIV78_RS10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10720 NZ_CP100136.1 Protein Homology CDS 2278462 2279394 . - 0 ID=cds-WP_015875343.1;Parent=gene-NIV78_RS10720;Dbxref=Genbank:WP_015875343.1;Name=WP_015875343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875343.1;locus_tag=NIV78_RS10720;product=SPFH/Band 7/PHB domain protein;protein_id=WP_015875343.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2279439 2279873 . - . ID=gene-NIV78_RS10725;Name=NIV78_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10725 NZ_CP100136.1 Protein Homology CDS 2279439 2279873 . - 0 ID=cds-WP_015875342.1;Parent=gene-NIV78_RS10725;Dbxref=Genbank:WP_015875342.1;Name=WP_015875342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478509.1;locus_tag=NIV78_RS10725;product=NfeD family protein;protein_id=WP_015875342.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2280027 2282429 . - . ID=gene-NIV78_RS10730;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=NIV78_RS10730 NZ_CP100136.1 Protein Homology CDS 2280027 2282429 . - 0 ID=cds-WP_017425152.1;Parent=gene-NIV78_RS10730;Dbxref=Genbank:WP_017425152.1;Name=WP_017425152.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352444.1;locus_tag=NIV78_RS10730;product=phosphoenolpyruvate synthase;protein_id=WP_017425152.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2282885 2283700 . + . ID=gene-NIV78_RS10735;Name=NIV78_RS10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10735 NZ_CP100136.1 Protein Homology CDS 2282885 2283700 . + 0 ID=cds-WP_015875340.1;Parent=gene-NIV78_RS10735;Dbxref=Genbank:WP_015875340.1;Name=WP_015875340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010104596.1;locus_tag=NIV78_RS10735;product=kinase/pyrophosphorylase;protein_id=WP_015875340.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2283795 2284577 . - . ID=gene-NIV78_RS10740;Name=NIV78_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10740 NZ_CP100136.1 Protein Homology CDS 2283795 2284577 . - 0 ID=cds-WP_015875339.1;Parent=gene-NIV78_RS10740;Dbxref=Genbank:WP_015875339.1;Name=WP_015875339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875339.1;locus_tag=NIV78_RS10740;product=RNA methyltransferase;protein_id=WP_015875339.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2284589 2285236 . - . ID=gene-NIV78_RS10745;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=NIV78_RS10745 NZ_CP100136.1 Protein Homology CDS 2284589 2285236 . - 0 ID=cds-WP_015875338.1;Parent=gene-NIV78_RS10745;Dbxref=Genbank:WP_015875338.1;Name=WP_015875338.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875338.1;locus_tag=NIV78_RS10745;product=ribonuclease HII;protein_id=WP_015875338.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2285233 2286402 . - . ID=gene-NIV78_RS10750;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=NIV78_RS10750 NZ_CP100136.1 Protein Homology CDS 2285233 2286402 . - 0 ID=cds-WP_015875337.1;Parent=gene-NIV78_RS10750;Dbxref=Genbank:WP_015875337.1;Name=WP_015875337.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364128.1;locus_tag=NIV78_RS10750;product=lipid-A-disaccharide synthase;protein_id=WP_015875337.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2286407 2287195 . - . ID=gene-NIV78_RS10755;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=NIV78_RS10755 NZ_CP100136.1 Protein Homology CDS 2286407 2287195 . - 0 ID=cds-WP_015875336.1;Parent=gene-NIV78_RS10755;Dbxref=Genbank:WP_015875336.1;Name=WP_015875336.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193051.1;locus_tag=NIV78_RS10755;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_015875336.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2287246 2287713 . - . ID=gene-NIV78_RS10760;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=NIV78_RS10760 NZ_CP100136.1 Protein Homology CDS 2287246 2287713 . - 0 ID=cds-WP_035981898.1;Parent=gene-NIV78_RS10760;Dbxref=Genbank:WP_035981898.1;Name=WP_035981898.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192266.1;locus_tag=NIV78_RS10760;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_035981898.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2287836 2288921 . - . ID=gene-NIV78_RS10765;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=NIV78_RS10765 NZ_CP100136.1 Protein Homology CDS 2287836 2288921 . - 0 ID=cds-WP_100555903.1;Parent=gene-NIV78_RS10765;Dbxref=Genbank:WP_100555903.1;Name=WP_100555903.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875334.1;locus_tag=NIV78_RS10765;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_100555903.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2288936 2289442 . - . ID=gene-NIV78_RS10770;Name=NIV78_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10770 NZ_CP100136.1 Protein Homology CDS 2288936 2289442 . - 0 ID=cds-WP_015875333.1;Parent=gene-NIV78_RS10770;Dbxref=Genbank:WP_015875333.1;Name=WP_015875333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521194.1;locus_tag=NIV78_RS10770;product=OmpH family outer membrane protein;protein_id=WP_015875333.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2289507 2291813 . - . ID=gene-NIV78_RS10775;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=NIV78_RS10775 NZ_CP100136.1 Protein Homology CDS 2289507 2291813 . - 0 ID=cds-WP_015875332.1;Parent=gene-NIV78_RS10775;Dbxref=Genbank:WP_015875332.1;Name=WP_015875332.1;Ontology_term=GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758559.1;locus_tag=NIV78_RS10775;product=outer membrane protein assembly factor BamA;protein_id=WP_015875332.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2291881 2293263 . - . ID=gene-NIV78_RS10780;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=NIV78_RS10780 NZ_CP100136.1 Protein Homology CDS 2291881 2293263 . - 0 ID=cds-WP_017423444.1;Parent=gene-NIV78_RS10780;Dbxref=Genbank:WP_017423444.1;Name=WP_017423444.1;Ontology_term=GO:0006508,GO:0004222,GO:0016021;gbkey=CDS;gene=rseP;go_component=integral component of membrane|0016021||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698508.1;locus_tag=NIV78_RS10780;product=RIP metalloprotease RseP;protein_id=WP_017423444.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2293277 2294473 . - . ID=gene-NIV78_RS10785;Name=NIV78_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10785 NZ_CP100136.1 Protein Homology CDS 2293277 2294473 . - 0 ID=cds-WP_017924415.1;Parent=gene-NIV78_RS10785;Dbxref=Genbank:WP_017924415.1;Name=WP_017924415.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904847.1;locus_tag=NIV78_RS10785;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_017924415.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2294490 2295323 . - . ID=gene-NIV78_RS10790;Name=NIV78_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10790 NZ_CP100136.1 Protein Homology CDS 2294490 2295323 . - 0 ID=cds-WP_251107359.1;Parent=gene-NIV78_RS10790;Dbxref=Genbank:WP_251107359.1;Name=WP_251107359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521189.1;locus_tag=NIV78_RS10790;product=phosphatidate cytidylyltransferase;protein_id=WP_251107359.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2295317 2296099 . - . ID=gene-NIV78_RS10795;Name=uppS;gbkey=Gene;gene=uppS;gene_biotype=protein_coding;locus_tag=NIV78_RS10795 NZ_CP100136.1 Protein Homology CDS 2295317 2296099 . - 0 ID=cds-WP_015875327.1;Parent=gene-NIV78_RS10795;Dbxref=Genbank:WP_015875327.1;Name=WP_015875327.1;Ontology_term=GO:0009252,GO:0005737;gbkey=CDS;gene=uppS;go_component=cytoplasm|0005737||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010092065.1;locus_tag=NIV78_RS10795;product=polyprenyl diphosphate synthase;protein_id=WP_015875327.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2296155 2296715 . - . ID=gene-NIV78_RS10800;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=NIV78_RS10800 NZ_CP100136.1 Protein Homology CDS 2296155 2296715 . - 0 ID=cds-WP_015875326.1;Parent=gene-NIV78_RS10800;Dbxref=Genbank:WP_015875326.1;Name=WP_015875326.1;Ontology_term=GO:0006412,GO:0008135,GO:0005737;gbkey=CDS;gene=frr;go_component=cytoplasm|0005737||IEA;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192143.1;locus_tag=NIV78_RS10800;product=ribosome recycling factor;protein_id=WP_015875326.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2296802 2297515 . - . ID=gene-NIV78_RS10805;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=NIV78_RS10805 NZ_CP100136.1 Protein Homology CDS 2296802 2297515 . - 0 ID=cds-WP_035980904.1;Parent=gene-NIV78_RS10805;Dbxref=Genbank:WP_035980904.1;Name=WP_035980904.1;Ontology_term=GO:0015949,GO:0033862;gbkey=CDS;gene=pyrH;go_function=UMP kinase activity|0033862||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008652269.1;locus_tag=NIV78_RS10805;product=UMP kinase;protein_id=WP_035980904.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2297683 2298564 . - . ID=gene-NIV78_RS10810;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=NIV78_RS10810 NZ_CP100136.1 Protein Homology CDS 2297683 2298564 . - 0 ID=cds-WP_015875324.1;Parent=gene-NIV78_RS10810;Dbxref=Genbank:WP_015875324.1;Name=WP_015875324.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352460.1;locus_tag=NIV78_RS10810;product=translation elongation factor Ts;protein_id=WP_015875324.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2298738 2299478 . - . ID=gene-NIV78_RS10815;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=NIV78_RS10815 NZ_CP100136.1 Protein Homology CDS 2298738 2299478 . - 0 ID=cds-WP_015875323.1;Parent=gene-NIV78_RS10815;Dbxref=Genbank:WP_015875323.1;Name=WP_015875323.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsB;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885144.1;locus_tag=NIV78_RS10815;product=30S ribosomal protein S2;protein_id=WP_015875323.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2299946 2300755 . + . ID=gene-NIV78_RS10820;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=NIV78_RS10820 NZ_CP100136.1 Protein Homology CDS 2299946 2300755 . + 0 ID=cds-WP_015875322.1;Parent=gene-NIV78_RS10820;Dbxref=Genbank:WP_015875322.1;Name=WP_015875322.1;Ontology_term=GO:0036211;gbkey=CDS;gene=map;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875322.1;locus_tag=NIV78_RS10820;product=type I methionyl aminopeptidase;protein_id=WP_015875322.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2300931 2303507 . + . ID=gene-NIV78_RS10825;Name=NIV78_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10825 NZ_CP100136.1 Protein Homology CDS 2300931 2303507 . + 0 ID=cds-WP_017924188.1;Parent=gene-NIV78_RS10825;Dbxref=Genbank:WP_017924188.1;Name=WP_017924188.1;Ontology_term=GO:0006807,GO:0008773;gbkey=CDS;go_function=[protein-PII] uridylyltransferase activity|0008773||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698517.1;locus_tag=NIV78_RS10825;product=[protein-PII] uridylyltransferase;protein_id=WP_017924188.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2303528 2305159 . + . ID=gene-NIV78_RS10830;Name=NIV78_RS10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10830 NZ_CP100136.1 Protein Homology CDS 2303528 2305159 . + 0 ID=cds-WP_015875320.1;Parent=gene-NIV78_RS10830;Dbxref=Genbank:WP_015875320.1;Name=WP_015875320.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723221.1;locus_tag=NIV78_RS10830;product=pseudouridine synthase;protein_id=WP_015875320.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2305263 2305796 . - . ID=gene-NIV78_RS10835;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=NIV78_RS10835 NZ_CP100136.1 Protein Homology CDS 2305263 2305796 . - 0 ID=cds-WP_015875319.1;Parent=gene-NIV78_RS10835;Dbxref=Genbank:WP_015875319.1;Name=WP_015875319.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890431.1;locus_tag=NIV78_RS10835;product=peptide deformylase;protein_id=WP_015875319.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2305793 2308036 . - . ID=gene-NIV78_RS10840;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=NIV78_RS10840 NZ_CP100136.1 Protein Homology CDS 2305793 2308036 . - 0 ID=cds-WP_251107357.1;Parent=gene-NIV78_RS10840;Dbxref=Genbank:WP_251107357.1;Name=WP_251107357.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875318.1;locus_tag=NIV78_RS10840;product=NAD-dependent DNA ligase LigA;protein_id=WP_251107357.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2308160 2309464 . - . ID=gene-NIV78_RS10845;Name=NIV78_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10845 NZ_CP100136.1 Protein Homology CDS 2308160 2309464 . - 0 ID=cds-WP_251107356.1;Parent=gene-NIV78_RS10845;Dbxref=Genbank:WP_251107356.1;Name=WP_251107356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004547833.1;locus_tag=NIV78_RS10845;product=cell division protein FtsZ;protein_id=WP_251107356.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2309522 2313040 . - . ID=gene-NIV78_RS10850;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=NIV78_RS10850 NZ_CP100136.1 Protein Homology CDS 2309522 2313040 . - 0 ID=cds-WP_124836128.1;Parent=gene-NIV78_RS10850;Dbxref=Genbank:WP_124836128.1;Name=WP_124836128.1;Ontology_term=GO:0007059,GO:0030261,GO:0005524;gbkey=CDS;gene=smc;go_function=ATP binding|0005524||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875316.1;locus_tag=NIV78_RS10850;product=chromosome segregation protein SMC;protein_id=WP_124836128.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2313171 2314103 . - . ID=gene-NIV78_RS10855;Name=NIV78_RS10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10855 NZ_CP100136.1 Protein Homology CDS 2313171 2314103 . - 0 ID=cds-WP_100555898.1;Parent=gene-NIV78_RS10855;Dbxref=Genbank:WP_100555898.1;Name=WP_100555898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026053.1;locus_tag=NIV78_RS10855;product=DMT family transporter;protein_id=WP_100555898.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2314410 2315627 . + . ID=gene-NIV78_RS10860;Name=dapC;gbkey=Gene;gene=dapC;gene_biotype=protein_coding;locus_tag=NIV78_RS10860 NZ_CP100136.1 Protein Homology CDS 2314410 2315627 . + 0 ID=cds-WP_017922813.1;Parent=gene-NIV78_RS10860;Dbxref=Genbank:WP_017922813.1;Name=WP_017922813.1;Ontology_term=GO:0019877,GO:0009016;gbkey=CDS;gene=dapC;go_function=succinyldiaminopimelate transaminase activity|0009016||IEA;go_process=diaminopimelate biosynthetic process|0019877||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498676.1;locus_tag=NIV78_RS10860;product=succinyldiaminopimelate transaminase;protein_id=WP_017922813.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2315674 2316501 . + . ID=gene-NIV78_RS10865;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=NIV78_RS10865 NZ_CP100136.1 Protein Homology CDS 2315674 2316501 . + 0 ID=cds-WP_015875313.1;Parent=gene-NIV78_RS10865;Dbxref=Genbank:WP_015875313.1;Name=WP_015875313.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007580558.1;locus_tag=NIV78_RS10865;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_015875313.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2316501 2316857 . + . ID=gene-NIV78_RS10870;Name=NIV78_RS10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10870 NZ_CP100136.1 Protein Homology CDS 2316501 2316857 . + 0 ID=cds-WP_015875312.1;Parent=gene-NIV78_RS10870;Dbxref=Genbank:WP_015875312.1;Name=WP_015875312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698526.1;locus_tag=NIV78_RS10870;product=ArsC family reductase;protein_id=WP_015875312.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2316955 2318094 . + . ID=gene-NIV78_RS10875;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=NIV78_RS10875 NZ_CP100136.1 Protein Homology CDS 2316955 2318094 . + 0 ID=cds-WP_169511921.1;Parent=gene-NIV78_RS10875;Dbxref=Genbank:WP_169511921.1;Name=WP_169511921.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493370.1;locus_tag=NIV78_RS10875;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_169511921.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2318105 2319031 . + . ID=gene-NIV78_RS10880;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=NIV78_RS10880 NZ_CP100136.1 Protein Homology CDS 2318105 2319031 . + 0 ID=cds-WP_015875310.1;Parent=gene-NIV78_RS10880;Dbxref=Genbank:WP_015875310.1;Name=WP_015875310.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875310.1;locus_tag=NIV78_RS10880;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_015875310.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2319160 2320599 . + . ID=gene-NIV78_RS10885;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=NIV78_RS10885 NZ_CP100136.1 Protein Homology CDS 2319160 2320599 . + 0 ID=cds-WP_043225258.1;Parent=gene-NIV78_RS10885;Dbxref=Genbank:WP_043225258.1;Name=WP_043225258.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601207.1;locus_tag=NIV78_RS10885;product=cardiolipin synthase;protein_id=WP_043225258.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2320635 2321114 . - . ID=gene-NIV78_RS10890;Name=NIV78_RS10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10890 NZ_CP100136.1 Protein Homology CDS 2320635 2321114 . - 0 ID=cds-WP_017424425.1;Parent=gene-NIV78_RS10890;Dbxref=Genbank:WP_017424425.1;Name=WP_017424425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904829.1;locus_tag=NIV78_RS10890;product=glutathione peroxidase;protein_id=WP_017424425.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2321344 2323278 . + . ID=gene-NIV78_RS10895;Name=NIV78_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10895 NZ_CP100136.1 Protein Homology CDS 2321344 2323278 . + 0 ID=cds-WP_017922818.1;Parent=gene-NIV78_RS10895;Dbxref=Genbank:WP_017922818.1;Name=WP_017922818.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851825.1;locus_tag=NIV78_RS10895;product=ATP-binding cassette domain-containing protein;protein_id=WP_017922818.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2323319 2323582 . - . ID=gene-NIV78_RS10900;Name=NIV78_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10900 NZ_CP100136.1 Protein Homology CDS 2323319 2323582 . - 0 ID=cds-WP_015875306.1;Parent=gene-NIV78_RS10900;Dbxref=Genbank:WP_015875306.1;Name=WP_015875306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875306.1;locus_tag=NIV78_RS10900;product=DUF2866 domain-containing protein;protein_id=WP_015875306.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2323720 2325096 . - . ID=gene-NIV78_RS10905;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=NIV78_RS10905 NZ_CP100136.1 Protein Homology CDS 2323720 2325096 . - 0 ID=cds-WP_017922819.1;Parent=gene-NIV78_RS10905;Dbxref=Genbank:WP_017922819.1;Name=WP_017922819.1;Ontology_term=GO:0006281,GO:0005524;gbkey=CDS;gene=radA;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026043.1;locus_tag=NIV78_RS10905;product=DNA repair protein RadA;protein_id=WP_017922819.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2325107 2326177 . - . ID=gene-NIV78_RS10910;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=NIV78_RS10910 NZ_CP100136.1 Protein Homology CDS 2325107 2326177 . - 0 ID=cds-WP_015875304.1;Parent=gene-NIV78_RS10910;Dbxref=Genbank:WP_015875304.1;Name=WP_015875304.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331722.1;locus_tag=NIV78_RS10910;product=alanine racemase;protein_id=WP_015875304.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2326390 2327697 . + . ID=gene-NIV78_RS10915;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=NIV78_RS10915 NZ_CP100136.1 Protein Homology CDS 2326390 2327697 . + 0 ID=cds-WP_015875303.1;Parent=gene-NIV78_RS10915;Dbxref=Genbank:WP_015875303.1;Name=WP_015875303.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885164.1;locus_tag=NIV78_RS10915;product=lysophospholipid transporter LplT;protein_id=WP_015875303.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2327843 2328652 . + . ID=gene-NIV78_RS10920;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=NIV78_RS10920 NZ_CP100136.1 Protein Homology CDS 2327843 2328652 . + 0 ID=cds-WP_015875302.1;Parent=gene-NIV78_RS10920;Dbxref=Genbank:WP_015875302.1;Name=WP_015875302.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010104676.1;locus_tag=NIV78_RS10920;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_015875302.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2328878 2329840 . - . ID=gene-NIV78_RS10925;Name=NIV78_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10925 NZ_CP100136.1 Protein Homology CDS 2328878 2329840 . - 0 ID=cds-WP_161520910.1;Parent=gene-NIV78_RS10925;Dbxref=Genbank:WP_161520910.1;Name=WP_161520910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875301.1;locus_tag=NIV78_RS10925;product=DUF1853 family protein;protein_id=WP_161520910.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2329837 2330934 . - . ID=gene-NIV78_RS10930;Name=NIV78_RS10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10930 NZ_CP100136.1 Protein Homology CDS 2329837 2330934 . - 0 ID=cds-WP_100555893.1;Parent=gene-NIV78_RS10930;Dbxref=Genbank:WP_100555893.1;Name=WP_100555893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875300.1;locus_tag=NIV78_RS10930;product=uracil-DNA glycosylase;protein_id=WP_100555893.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2330921 2331418 . - . ID=gene-NIV78_RS10935;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=NIV78_RS10935 NZ_CP100136.1 Protein Homology CDS 2330921 2331418 . - 0 ID=cds-WP_015875299.1;Parent=gene-NIV78_RS10935;Dbxref=Genbank:WP_015875299.1;Name=WP_015875299.1;Ontology_term=GO:0036211,GO:0042254,GO:0008999;gbkey=CDS;gene=rimI;go_function=ribosomal protein S5-alanine alpha-N-acetyltransferase activity|0008999||IEA;go_process=protein modification process|0036211||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875299.1;locus_tag=NIV78_RS10935;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_015875299.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2331415 2332221 . - . ID=gene-NIV78_RS10940;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=NIV78_RS10940 NZ_CP100136.1 Protein Homology CDS 2331415 2332221 . - 0 ID=cds-WP_015875298.1;Parent=gene-NIV78_RS10940;Dbxref=Genbank:WP_015875298.1;Name=WP_015875298.1;Ontology_term=GO:0006400,GO:0003725;gbkey=CDS;gene=tsaB;go_function=double-stranded RNA binding|0003725||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011204014.1;locus_tag=NIV78_RS10940;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_015875298.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2332368 2332637 . + . ID=gene-NIV78_RS10945;Name=NIV78_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10945 NZ_CP100136.1 Protein Homology CDS 2332368 2332637 . + 0 ID=cds-WP_015875297.1;Parent=gene-NIV78_RS10945;Dbxref=Genbank:WP_015875297.1;Name=WP_015875297.1;Ontology_term=GO:0000062;gbkey=CDS;go_function=fatty-acyl-CoA binding|0000062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763999.1;locus_tag=NIV78_RS10945;product=acyl-CoA-binding protein;protein_id=WP_015875297.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2333108 2334682 . + . ID=gene-NIV78_RS10950;Name=NIV78_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10950 NZ_CP100136.1 Protein Homology CDS 2333108 2334682 . + 0 ID=cds-WP_015875296.1;Parent=gene-NIV78_RS10950;Dbxref=Genbank:WP_015875296.1;Name=WP_015875296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698542.1;locus_tag=NIV78_RS10950;product=DEAD/DEAH box helicase;protein_id=WP_015875296.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2335066 2336373 . + . ID=gene-NIV78_RS10955;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=NIV78_RS10955 NZ_CP100136.1 Protein Homology CDS 2335066 2336373 . + 0 ID=cds-WP_015875295.1;Parent=gene-NIV78_RS10955;Dbxref=Genbank:WP_015875295.1;Name=WP_015875295.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009931004.1;locus_tag=NIV78_RS10955;product=isocitrate lyase;protein_id=WP_015875295.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2336643 2337545 . - . ID=gene-NIV78_RS10960;Name=NIV78_RS10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10960 NZ_CP100136.1 Protein Homology CDS 2336643 2337545 . - 0 ID=cds-WP_015875294.1;Parent=gene-NIV78_RS10960;Dbxref=Genbank:WP_015875294.1;Name=WP_015875294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698546.1;locus_tag=NIV78_RS10960;product=LysR family transcriptional regulator;protein_id=WP_015875294.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2337680 2338453 . + . ID=gene-NIV78_RS10965;Name=NIV78_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10965 NZ_CP100136.1 Protein Homology CDS 2337680 2338453 . + 0 ID=cds-WP_017923427.1;Parent=gene-NIV78_RS10965;Dbxref=Genbank:WP_017923427.1;Name=WP_017923427.1;Ontology_term=GO:0006805,GO:0018784;gbkey=CDS;go_function=(S)-2-haloacid dehalogenase activity|0018784||IEA;go_process=xenobiotic metabolic process|0006805||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424947.1;locus_tag=NIV78_RS10965;product=haloacid dehalogenase type II;protein_id=WP_017923427.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2338538 2338942 . - . ID=gene-NIV78_RS10970;Name=NIV78_RS10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10970 NZ_CP100136.1 Protein Homology CDS 2338538 2338942 . - 0 ID=cds-WP_015875292.1;Parent=gene-NIV78_RS10970;Dbxref=Genbank:WP_015875292.1;Name=WP_015875292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875292.1;locus_tag=NIV78_RS10970;product=gamma-glutamylcyclotransferase;protein_id=WP_015875292.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2339183 2340082 . + . ID=gene-NIV78_RS10975;Name=NIV78_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10975 NZ_CP100136.1 Protein Homology CDS 2339183 2340082 . + 0 ID=cds-WP_017923426.1;Parent=gene-NIV78_RS10975;Dbxref=Genbank:WP_017923426.1;Name=WP_017923426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875291.1;locus_tag=NIV78_RS10975;product=helix-turn-helix transcriptional regulator;protein_id=WP_017923426.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2340108 2340548 . - . ID=gene-NIV78_RS10980;Name=NIV78_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS10980 NZ_CP100136.1 Protein Homology CDS 2340108 2340548 . - 0 ID=cds-WP_232734530.1;Parent=gene-NIV78_RS10980;Dbxref=Genbank:WP_232734530.1;Name=WP_232734530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875290.1;locus_tag=NIV78_RS10980;product=GNAT family N-acetyltransferase;protein_id=WP_232734530.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2340948 2341024 . - . ID=gene-NIV78_RS10985;Name=NIV78_RS10985;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS10985 NZ_CP100136.1 tRNAscan-SE tRNA 2340948 2341024 . - . ID=rna-NIV78_RS10985;Parent=gene-NIV78_RS10985;anticodon=(pos:complement(2340988..2340990));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS10985;product=tRNA-Asp NZ_CP100136.1 tRNAscan-SE exon 2340948 2341024 . - . ID=exon-NIV78_RS10985-1;Parent=rna-NIV78_RS10985;anticodon=(pos:complement(2340988..2340990));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS10985;product=tRNA-Asp NZ_CP100136.1 RefSeq gene 2341103 2341178 . - . ID=gene-NIV78_RS10990;Name=NIV78_RS10990;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS10990 NZ_CP100136.1 tRNAscan-SE tRNA 2341103 2341178 . - . ID=rna-NIV78_RS10990;Parent=gene-NIV78_RS10990;anticodon=(pos:complement(2341142..2341144));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS10990;product=tRNA-Glu NZ_CP100136.1 tRNAscan-SE exon 2341103 2341178 . - . ID=exon-NIV78_RS10990-1;Parent=rna-NIV78_RS10990;anticodon=(pos:complement(2341142..2341144));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS10990;product=tRNA-Glu NZ_CP100136.1 RefSeq gene 2341253 2341329 . - . ID=gene-NIV78_RS10995;Name=NIV78_RS10995;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS10995 NZ_CP100136.1 tRNAscan-SE tRNA 2341253 2341329 . - . ID=rna-NIV78_RS10995;Parent=gene-NIV78_RS10995;anticodon=(pos:complement(2341293..2341295));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS10995;product=tRNA-Asp NZ_CP100136.1 tRNAscan-SE exon 2341253 2341329 . - . ID=exon-NIV78_RS10995-1;Parent=rna-NIV78_RS10995;anticodon=(pos:complement(2341293..2341295));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS10995;product=tRNA-Asp NZ_CP100136.1 RefSeq gene 2341404 2341479 . - . ID=gene-NIV78_RS11000;Name=NIV78_RS11000;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS11000 NZ_CP100136.1 tRNAscan-SE tRNA 2341404 2341479 . - . ID=rna-NIV78_RS11000;Parent=gene-NIV78_RS11000;anticodon=(pos:complement(2341443..2341445));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS11000;product=tRNA-Glu NZ_CP100136.1 tRNAscan-SE exon 2341404 2341479 . - . ID=exon-NIV78_RS11000-1;Parent=rna-NIV78_RS11000;anticodon=(pos:complement(2341443..2341445));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS11000;product=tRNA-Glu NZ_CP100136.1 RefSeq gene 2341561 2341637 . - . ID=gene-NIV78_RS11005;Name=NIV78_RS11005;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS11005 NZ_CP100136.1 tRNAscan-SE tRNA 2341561 2341637 . - . ID=rna-NIV78_RS11005;Parent=gene-NIV78_RS11005;anticodon=(pos:complement(2341601..2341603));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS11005;product=tRNA-Asp NZ_CP100136.1 tRNAscan-SE exon 2341561 2341637 . - . ID=exon-NIV78_RS11005-1;Parent=rna-NIV78_RS11005;anticodon=(pos:complement(2341601..2341603));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS11005;product=tRNA-Asp NZ_CP100136.1 RefSeq gene 2341716 2341791 . - . ID=gene-NIV78_RS11010;Name=NIV78_RS11010;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS11010 NZ_CP100136.1 tRNAscan-SE tRNA 2341716 2341791 . - . ID=rna-NIV78_RS11010;Parent=gene-NIV78_RS11010;anticodon=(pos:complement(2341755..2341757));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS11010;product=tRNA-Glu NZ_CP100136.1 tRNAscan-SE exon 2341716 2341791 . - . ID=exon-NIV78_RS11010-1;Parent=rna-NIV78_RS11010;anticodon=(pos:complement(2341755..2341757));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS11010;product=tRNA-Glu NZ_CP100136.1 RefSeq gene 2341951 2342026 . - . ID=gene-NIV78_RS11015;Name=NIV78_RS11015;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS11015 NZ_CP100136.1 tRNAscan-SE tRNA 2341951 2342026 . - . ID=rna-NIV78_RS11015;Parent=gene-NIV78_RS11015;anticodon=(pos:complement(2341991..2341993));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS11015;product=tRNA-Ala NZ_CP100136.1 tRNAscan-SE exon 2341951 2342026 . - . ID=exon-NIV78_RS11015-1;Parent=rna-NIV78_RS11015;anticodon=(pos:complement(2341991..2341993));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS11015;product=tRNA-Ala NZ_CP100136.1 RefSeq gene 2342237 2342312 . - . ID=gene-NIV78_RS11020;Name=NIV78_RS11020;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS11020 NZ_CP100136.1 tRNAscan-SE tRNA 2342237 2342312 . - . ID=rna-NIV78_RS11020;Parent=gene-NIV78_RS11020;anticodon=(pos:complement(2342277..2342279));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS11020;product=tRNA-Ala NZ_CP100136.1 tRNAscan-SE exon 2342237 2342312 . - . ID=exon-NIV78_RS11020-1;Parent=rna-NIV78_RS11020;anticodon=(pos:complement(2342277..2342279));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS11020;product=tRNA-Ala NZ_CP100136.1 RefSeq gene 2342479 2343879 . - . ID=gene-NIV78_RS11025;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=NIV78_RS11025 NZ_CP100136.1 Protein Homology CDS 2342479 2343879 . - 0 ID=cds-WP_015875289.1;Parent=gene-NIV78_RS11025;Dbxref=Genbank:WP_015875289.1;Name=WP_015875289.1;Ontology_term=GO:0006424,GO:0004818,GO:0009332;gbkey=CDS;gene=gltX;go_component=glutamate-tRNA ligase complex|0009332||IEA;go_function=glutamate-tRNA ligase activity|0004818||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875289.1;locus_tag=NIV78_RS11025;product=glutamate--tRNA ligase;protein_id=WP_015875289.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2344122 2346599 . - . ID=gene-NIV78_RS11030;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=NIV78_RS11030 NZ_CP100136.1 Protein Homology CDS 2344122 2346599 . - 0 ID=cds-WP_017922754.1;Parent=gene-NIV78_RS11030;Dbxref=Genbank:WP_017922754.1;Name=WP_017922754.1;Ontology_term=GO:0030151,GO:0043546,GO:0050626,GO:0042597;gbkey=CDS;gene=torA;go_component=periplasmic space|0042597||IEA;go_function=molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,trimethylamine-N-oxide reductase (cytochrome c) activity|0050626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875288.1;locus_tag=NIV78_RS11030;product=trimethylamine-N-oxide reductase TorA;protein_id=WP_017922754.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2346583 2347275 . - . ID=gene-NIV78_RS11035;Name=NIV78_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11035 NZ_CP100136.1 Protein Homology CDS 2346583 2347275 . - 0 ID=cds-WP_017424945.1;Parent=gene-NIV78_RS11035;Dbxref=Genbank:WP_017424945.1;Name=WP_017424945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424945.1;locus_tag=NIV78_RS11035;product=molecular chaperone TorD family protein;protein_id=WP_017424945.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2347272 2348897 . - . ID=gene-NIV78_RS11040;Name=NIV78_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11040 NZ_CP100136.1 Protein Homology CDS 2347272 2348897 . - 0 ID=cds-WP_017922755.1;Parent=gene-NIV78_RS11040;Dbxref=Genbank:WP_017922755.1;Name=WP_017922755.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424944.1;locus_tag=NIV78_RS11040;product=c-type cytochrome;protein_id=WP_017922755.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2349529 2350446 . + . ID=gene-NIV78_RS11045;Name=NIV78_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11045 NZ_CP100136.1 Protein Homology CDS 2349529 2350446 . + 0 ID=cds-WP_017922756.1;Parent=gene-NIV78_RS11045;Dbxref=Genbank:WP_017922756.1;Name=WP_017922756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875285.1;locus_tag=NIV78_RS11045;product=patatin-like phospholipase family protein;protein_id=WP_017922756.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2350586 2351266 . - . ID=gene-NIV78_RS11050;Name=NIV78_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11050 NZ_CP100136.1 Protein Homology CDS 2350586 2351266 . - 0 ID=cds-WP_015875284.1;Parent=gene-NIV78_RS11050;Dbxref=Genbank:WP_015875284.1;Name=WP_015875284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875284.1;locus_tag=NIV78_RS11050;product=C40 family peptidase;protein_id=WP_015875284.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2351381 2353138 . - . ID=gene-NIV78_RS11055;Name=NIV78_RS11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11055 NZ_CP100136.1 Protein Homology CDS 2351381 2353138 . - 0 ID=cds-WP_017922758.1;Parent=gene-NIV78_RS11055;Dbxref=Genbank:WP_017922758.1;Name=WP_017922758.1;Ontology_term=GO:0015833,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875283.1;locus_tag=NIV78_RS11055;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_017922758.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2353135 2354232 . - . ID=gene-NIV78_RS11060;Name=NIV78_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11060 NZ_CP100136.1 Protein Homology CDS 2353135 2354232 . - 0 ID=cds-WP_017922759.1;Parent=gene-NIV78_RS11060;Dbxref=Genbank:WP_017922759.1;Name=WP_017922759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004524778.1;locus_tag=NIV78_RS11060;product=ABC transporter permease;protein_id=WP_017922759.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2354234 2355274 . - . ID=gene-NIV78_RS11065;Name=NIV78_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11065 NZ_CP100136.1 Protein Homology CDS 2354234 2355274 . - 0 ID=cds-WP_043225210.1;Parent=gene-NIV78_RS11065;Dbxref=Genbank:WP_043225210.1;Name=WP_043225210.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890352.1;locus_tag=NIV78_RS11065;product=ABC transporter permease subunit;protein_id=WP_043225210.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2355360 2357186 . - . ID=gene-NIV78_RS11070;Name=NIV78_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11070 NZ_CP100136.1 Protein Homology CDS 2355360 2357186 . - 0 ID=cds-WP_015875280.1;Parent=gene-NIV78_RS11070;Dbxref=Genbank:WP_015875280.1;Name=WP_015875280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875280.1;locus_tag=NIV78_RS11070;product=extracellular solute-binding protein;protein_id=WP_015875280.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2357294 2357503 . + . ID=gene-NIV78_RS11075;Name=NIV78_RS11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11075 NZ_CP100136.1 GeneMarkS-2+ CDS 2357294 2357503 . + 0 ID=cds-WP_124837648.1;Parent=gene-NIV78_RS11075;Dbxref=Genbank:WP_124837648.1;Name=WP_124837648.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS11075;product=hypothetical protein;protein_id=WP_124837648.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2357565 2357927 . - . ID=gene-NIV78_RS11080;Name=NIV78_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11080 NZ_CP100136.1 Protein Homology CDS 2357565 2357927 . - 0 ID=cds-WP_017924332.1;Parent=gene-NIV78_RS11080;Dbxref=Genbank:WP_017924332.1;Name=WP_017924332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875279.1;locus_tag=NIV78_RS11080;product=hypothetical protein;protein_id=WP_017924332.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2358601 2359473 . - . ID=gene-NIV78_RS11085;Name=NIV78_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11085 NZ_CP100136.1 Protein Homology CDS 2358601 2359473 . - 0 ID=cds-WP_015875278.1;Parent=gene-NIV78_RS11085;Dbxref=Genbank:WP_015875278.1;Name=WP_015875278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875278.1;locus_tag=NIV78_RS11085;product=LysR substrate-binding domain-containing protein;protein_id=WP_015875278.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2360115 2360540 . + . ID=gene-NIV78_RS11090;Name=NIV78_RS11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11090 NZ_CP100136.1 GeneMarkS-2+ CDS 2360115 2360540 . + 0 ID=cds-WP_251107353.1;Parent=gene-NIV78_RS11090;Dbxref=Genbank:WP_251107353.1;Name=WP_251107353.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS11090;product=hypothetical protein;protein_id=WP_251107353.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2361666 2362694 . + . ID=gene-NIV78_RS11095;Name=NIV78_RS11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11095 NZ_CP100136.1 GeneMarkS-2+ CDS 2361666 2362694 . + 0 ID=cds-WP_157384196.1;Parent=gene-NIV78_RS11095;Dbxref=Genbank:WP_157384196.1;Name=WP_157384196.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS11095;product=hypothetical protein;protein_id=WP_157384196.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2363031 2365691 . - . ID=gene-NIV78_RS11100;Name=NIV78_RS11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11100 NZ_CP100136.1 Protein Homology CDS 2363031 2365691 . - 0 ID=cds-WP_251118878.1;Parent=gene-NIV78_RS11100;Dbxref=Genbank:WP_251118878.1;Name=WP_251118878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011486201.1;locus_tag=NIV78_RS11100;product=AAA family ATPase;protein_id=WP_251118878.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2366107 2366200 . - . ID=gene-NIV78_RS11105;Name=NIV78_RS11105;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS11105 NZ_CP100136.1 tRNAscan-SE tRNA 2366107 2366200 . - . ID=rna-NIV78_RS11105;Parent=gene-NIV78_RS11105;anticodon=(pos:complement(2366164..2366166));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS11105;product=tRNA-Ser NZ_CP100136.1 tRNAscan-SE exon 2366107 2366200 . - . ID=exon-NIV78_RS11105-1;Parent=rna-NIV78_RS11105;anticodon=(pos:complement(2366164..2366166));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS11105;product=tRNA-Ser NZ_CP100136.1 RefSeq gene 2366333 2367583 . - . ID=gene-NIV78_RS11110;Name=NIV78_RS11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11110 NZ_CP100136.1 Protein Homology CDS 2366333 2367583 . - 0 ID=cds-WP_017432558.1;Parent=gene-NIV78_RS11110;Dbxref=Genbank:WP_017432558.1;Name=WP_017432558.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408212.1;locus_tag=NIV78_RS11110;product=aspartate kinase;protein_id=WP_017432558.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2367930 2369369 . - . ID=gene-NIV78_RS11115;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=NIV78_RS11115 NZ_CP100136.1 Protein Homology CDS 2367930 2369369 . - 0 ID=cds-WP_257756763.1;Parent=gene-NIV78_RS11115;Dbxref=Genbank:WP_257756763.1;Name=WP_257756763.1;Ontology_term=GO:0006400,GO:0016879;gbkey=CDS;gene=tilS;go_function=ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191335.1;locus_tag=NIV78_RS11115;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_257756763.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2369413 2370384 . - . ID=gene-NIV78_RS11120;Name=NIV78_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11120 NZ_CP100136.1 Protein Homology CDS 2369413 2370384 . - 0 ID=cds-WP_017423377.1;Parent=gene-NIV78_RS11120;Dbxref=Genbank:WP_017423377.1;Name=WP_017423377.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423377.1;locus_tag=NIV78_RS11120;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=WP_017423377.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2370490 2371401 . - . ID=gene-NIV78_RS11125;Name=NIV78_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11125 NZ_CP100136.1 Protein Homology CDS 2370490 2371401 . - 0 ID=cds-WP_257756765.1;Parent=gene-NIV78_RS11125;Dbxref=Genbank:WP_257756765.1;Name=WP_257756765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851870.1;locus_tag=NIV78_RS11125;product=DNA-3-methyladenine glycosylase 2 family protein;protein_id=WP_257756765.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2371447 2372841 . - . ID=gene-NIV78_RS11130;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=NIV78_RS11130 NZ_CP100136.1 Protein Homology CDS 2371447 2372841 . - 0 ID=cds-WP_015876317.1;Parent=gene-NIV78_RS11130;Dbxref=Genbank:WP_015876317.1;Name=WP_015876317.1;Ontology_term=GO:0006423,GO:0004817,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011488917.1;locus_tag=NIV78_RS11130;product=cysteine--tRNA ligase;protein_id=WP_015876317.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2373070 2373786 . + . ID=gene-NIV78_RS11135;Name=NIV78_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11135 NZ_CP100136.1 Protein Homology CDS 2373070 2373786 . + 0 ID=cds-WP_015876318.1;Parent=gene-NIV78_RS11135;Dbxref=Genbank:WP_015876318.1;Name=WP_015876318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876318.1;locus_tag=NIV78_RS11135;product=tetratricopeptide repeat protein;protein_id=WP_015876318.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2373846 2374424 . + . ID=gene-NIV78_RS11140;Name=NIV78_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11140 NZ_CP100136.1 Protein Homology CDS 2373846 2374424 . + 0 ID=cds-WP_257756766.1;Parent=gene-NIV78_RS11140;Dbxref=Genbank:WP_257756766.1;Name=WP_257756766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364186.1;locus_tag=NIV78_RS11140;product=peptidylprolyl isomerase;protein_id=WP_257756766.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2374512 2375003 . + . ID=gene-NIV78_RS11145;Name=NIV78_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11145 NZ_CP100136.1 Protein Homology CDS 2374512 2375003 . + 0 ID=cds-WP_015876320.1;Parent=gene-NIV78_RS11145;Dbxref=Genbank:WP_015876320.1;Name=WP_015876320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016345694.1;locus_tag=NIV78_RS11145;product=peptidylprolyl isomerase;protein_id=WP_015876320.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2375026 2375829 . + . ID=gene-NIV78_RS11150;Name=NIV78_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11150 NZ_CP100136.1 Protein Homology CDS 2375026 2375829 . + 0 ID=cds-WP_015876321.1;Parent=gene-NIV78_RS11150;Dbxref=Genbank:WP_015876321.1;Name=WP_015876321.1;Ontology_term=GO:0009245,GO:0016462;gbkey=CDS;go_function=pyrophosphatase activity|0016462||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876321.1;locus_tag=NIV78_RS11150;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_015876321.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2375893 2376657 . - . ID=gene-NIV78_RS11155;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=NIV78_RS11155 NZ_CP100136.1 Protein Homology CDS 2375893 2376657 . - 0 ID=cds-WP_017923278.1;Parent=gene-NIV78_RS11155;Dbxref=Genbank:WP_017923278.1;Name=WP_017923278.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423974.1;locus_tag=NIV78_RS11155;product=serine O-acetyltransferase;protein_id=WP_017923278.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2376844 2377698 . - . ID=gene-NIV78_RS11160;Name=NIV78_RS11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11160 NZ_CP100136.1 Protein Homology CDS 2376844 2377698 . - 0 ID=cds-WP_080630194.1;Parent=gene-NIV78_RS11160;Dbxref=Genbank:WP_080630194.1;Name=WP_080630194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876323.1;locus_tag=NIV78_RS11160;product=RNA methyltransferase;protein_id=WP_080630194.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2378005 2378820 . + . ID=gene-NIV78_RS11165;Name=NIV78_RS11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11165 NZ_CP100136.1 Protein Homology CDS 2378005 2378820 . + 0 ID=cds-WP_015876324.1;Parent=gene-NIV78_RS11165;Dbxref=Genbank:WP_015876324.1;Name=WP_015876324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876324.1;locus_tag=NIV78_RS11165;product=inositol monophosphatase;protein_id=WP_015876324.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 2378896 2379052 . + . ID=gene-NIV78_RS11170;Name=NIV78_RS11170;end_range=2379052,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS11170;partial=true;pseudo=true NZ_CP100136.1 Protein Homology CDS 2378896 2379052 . + 0 ID=cds-NIV78_RS11170;Parent=gene-NIV78_RS11170;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2379052,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732717.1;locus_tag=NIV78_RS11170;partial=true;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 2379255 2380325 . - . ID=gene-NIV78_RS11175;Name=NIV78_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11175 NZ_CP100136.1 Protein Homology CDS 2379255 2380325 . - 0 ID=cds-WP_257756769.1;Parent=gene-NIV78_RS11175;Dbxref=Genbank:WP_257756769.1;Name=WP_257756769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351203.1;locus_tag=NIV78_RS11175;product=Imm72 family immunity protein;protein_id=WP_257756769.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2380322 2381185 . - . ID=gene-NIV78_RS11180;Name=NIV78_RS11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11180 NZ_CP100136.1 GeneMarkS-2+ CDS 2380322 2381185 . - 0 ID=cds-WP_257756771.1;Parent=gene-NIV78_RS11180;Dbxref=Genbank:WP_257756771.1;Name=WP_257756771.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS11180;product=hypothetical protein;protein_id=WP_257756771.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2381198 2382265 . - . ID=gene-NIV78_RS11185;Name=NIV78_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11185 NZ_CP100136.1 Protein Homology CDS 2381198 2382265 . - 0 ID=cds-WP_015876325.1;Parent=gene-NIV78_RS11185;Dbxref=Genbank:WP_015876325.1;Name=WP_015876325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883611.1;locus_tag=NIV78_RS11185;product=Imm72 family immunity protein;protein_id=WP_015876325.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2382265 2383722 . - . ID=gene-NIV78_RS11190;Name=NIV78_RS11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11190 NZ_CP100136.1 Protein Homology CDS 2382265 2383722 . - 0 ID=cds-WP_124837674.1;Parent=gene-NIV78_RS11190;Dbxref=Genbank:WP_124837674.1;Name=WP_124837674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722597.1;locus_tag=NIV78_RS11190;product=hypothetical protein;protein_id=WP_124837674.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2383719 2386490 . - . ID=gene-NIV78_RS11195;Name=NIV78_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11195 NZ_CP100136.1 Protein Homology CDS 2383719 2386490 . - 0 ID=cds-WP_251107350.1;Parent=gene-NIV78_RS11195;Dbxref=Genbank:WP_251107350.1;Name=WP_251107350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722596.1;locus_tag=NIV78_RS11195;product=type VI secretion system tip protein VgrG;protein_id=WP_251107350.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2386627 2387247 . - . ID=gene-NIV78_RS11200;Name=NIV78_RS11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11200 NZ_CP100136.1 Protein Homology CDS 2386627 2387247 . - 0 ID=cds-WP_015876326.1;Parent=gene-NIV78_RS11200;Dbxref=Genbank:WP_015876326.1;Name=WP_015876326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876326.1;locus_tag=NIV78_RS11200;product=HAD-IB family hydrolase;protein_id=WP_015876326.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2387573 2388598 . - . ID=gene-NIV78_RS11205;Name=kdgT;gbkey=Gene;gene=kdgT;gene_biotype=protein_coding;locus_tag=NIV78_RS11205 NZ_CP100136.1 Protein Homology CDS 2387573 2388598 . - 0 ID=cds-WP_015876327.1;Parent=gene-NIV78_RS11205;Dbxref=Genbank:WP_015876327.1;Name=WP_015876327.1;Ontology_term=GO:0046411,GO:0015649;gbkey=CDS;gene=kdgT;go_function=2-keto-3-deoxygluconate:proton symporter activity|0015649||IEA;go_process=2-keto-3-deoxygluconate transmembrane transport|0046411||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876327.1;locus_tag=NIV78_RS11205;product=2-keto-3-deoxygluconate transporter;protein_id=WP_015876327.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2389140 2389973 . + . ID=gene-NIV78_RS11210;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=NIV78_RS11210 NZ_CP100136.1 Protein Homology CDS 2389140 2389973 . + 0 ID=cds-WP_017923596.1;Parent=gene-NIV78_RS11210;Dbxref=Genbank:WP_017923596.1;Name=WP_017923596.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=kdgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423977.1;locus_tag=NIV78_RS11210;product=DNA-binding transcriptional regulator KdgR;protein_id=WP_017923596.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2390190 2390423 . - . ID=gene-NIV78_RS11215;Name=NIV78_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11215 NZ_CP100136.1 GeneMarkS-2+ CDS 2390190 2390423 . - 0 ID=cds-WP_251118880.1;Parent=gene-NIV78_RS11215;Dbxref=Genbank:WP_251118880.1;Name=WP_251118880.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS11215;product=hypothetical protein;protein_id=WP_251118880.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2390437 2391261 . - . ID=gene-NIV78_RS11220;Name=NIV78_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11220 NZ_CP100136.1 Protein Homology CDS 2390437 2391261 . - 0 ID=cds-WP_017923598.1;Parent=gene-NIV78_RS11220;Dbxref=Genbank:WP_017923598.1;Name=WP_017923598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876329.1;locus_tag=NIV78_RS11220;product=cytochrome c;protein_id=WP_017923598.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2391612 2393330 . + . ID=gene-NIV78_RS11225;Name=NIV78_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11225 NZ_CP100136.1 Protein Homology CDS 2391612 2393330 . + 0 ID=cds-WP_257757401.1;Parent=gene-NIV78_RS11225;Dbxref=Genbank:WP_257757401.1;Name=WP_257757401.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876330.1;locus_tag=NIV78_RS11225;product=methyl-accepting chemotaxis protein;protein_id=WP_257757401.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2393440 2394672 . + . ID=gene-NIV78_RS11230;Name=NIV78_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11230 NZ_CP100136.1 Protein Homology CDS 2393440 2394672 . + 0 ID=cds-WP_043227029.1;Parent=gene-NIV78_RS11230;Dbxref=Genbank:WP_043227029.1;Name=WP_043227029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876331.1;locus_tag=NIV78_RS11230;product=EAL domain-containing protein;protein_id=WP_043227029.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2395303 2398014 . + . ID=gene-NIV78_RS11235;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=NIV78_RS11235 NZ_CP100136.1 Protein Homology CDS 2395303 2398014 . + 0 ID=cds-WP_257756775.1;Parent=gene-NIV78_RS11235;Dbxref=Genbank:WP_257756775.1;Name=WP_257756775.1;Ontology_term=GO:0006298,GO:0005524;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698699.1;locus_tag=NIV78_RS11235;product=DNA mismatch repair protein MutS;protein_id=WP_257756775.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2397998 2399251 . + . ID=gene-NIV78_RS11240;Name=NIV78_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11240 NZ_CP100136.1 Protein Homology CDS 2397998 2399251 . + 0 ID=cds-WP_043307866.1;Parent=gene-NIV78_RS11240;Dbxref=Genbank:WP_043307866.1;Name=WP_043307866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352526.1;locus_tag=NIV78_RS11240;product=membrane protein;protein_id=WP_043307866.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2399302 2399847 . - . ID=gene-NIV78_RS11245;Name=NIV78_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11245 NZ_CP100136.1 Protein Homology CDS 2399302 2399847 . - 0 ID=cds-WP_015876383.1;Parent=gene-NIV78_RS11245;Dbxref=Genbank:WP_015876383.1;Name=WP_015876383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498638.1;locus_tag=NIV78_RS11245;product=peptidylprolyl isomerase;protein_id=WP_015876383.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2399880 2401103 . + . ID=gene-NIV78_RS11250;Name=NIV78_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11250 NZ_CP100136.1 Protein Homology CDS 2399880 2401103 . + 0 ID=cds-WP_051008362.1;Parent=gene-NIV78_RS11250;Dbxref=Genbank:WP_051008362.1;Name=WP_051008362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423321.1;locus_tag=NIV78_RS11250;product=cupin domain-containing protein;protein_id=WP_051008362.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2401311 2401607 . - . ID=gene-NIV78_RS11255;Name=NIV78_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11255 NZ_CP100136.1 Protein Homology CDS 2401311 2401607 . - 0 ID=cds-WP_161520944.1;Parent=gene-NIV78_RS11255;Dbxref=Genbank:WP_161520944.1;Name=WP_161520944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013435672.1;locus_tag=NIV78_RS11255;product=hypothetical protein;protein_id=WP_161520944.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2401713 2402486 . - . ID=gene-NIV78_RS11260;Name=NIV78_RS11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11260 NZ_CP100136.1 Protein Homology CDS 2401713 2402486 . - 0 ID=cds-WP_015876385.1;Parent=gene-NIV78_RS11260;Dbxref=Genbank:WP_015876385.1;Name=WP_015876385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007580406.1;locus_tag=NIV78_RS11260;product=MBL fold metallo-hydrolase;protein_id=WP_015876385.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2402491 2403636 . - . ID=gene-NIV78_RS11265;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=NIV78_RS11265 NZ_CP100136.1 Protein Homology CDS 2402491 2403636 . - 0 ID=cds-WP_015876386.1;Parent=gene-NIV78_RS11265;Dbxref=Genbank:WP_015876386.1;Name=WP_015876386.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904698.1;locus_tag=NIV78_RS11265;product=outer membrane protein assembly factor BamC;protein_id=WP_015876386.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2403739 2404641 . - . ID=gene-NIV78_RS11270;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=NIV78_RS11270 NZ_CP100136.1 Protein Homology CDS 2403739 2404641 . - 0 ID=cds-WP_015876387.1;Parent=gene-NIV78_RS11270;Dbxref=Genbank:WP_015876387.1;Name=WP_015876387.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602151.1;locus_tag=NIV78_RS11270;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_015876387.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2404686 2405303 . - . ID=gene-NIV78_RS11275;Name=NIV78_RS11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11275 NZ_CP100136.1 Protein Homology CDS 2404686 2405303 . - 0 ID=cds-WP_251107080.1;Parent=gene-NIV78_RS11275;Dbxref=Genbank:WP_251107080.1;Name=WP_251107080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890212.1;locus_tag=NIV78_RS11275;product=SAM-dependent methyltransferase;protein_id=WP_251107080.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2405320 2406522 . - . ID=gene-NIV78_RS11280;Name=NIV78_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11280 NZ_CP100136.1 Protein Homology CDS 2405320 2406522 . - 0 ID=cds-WP_015876389.1;Parent=gene-NIV78_RS11280;Dbxref=Genbank:WP_015876389.1;Name=WP_015876389.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010104925.1;locus_tag=NIV78_RS11280;product=tryptophan--tRNA ligase;protein_id=WP_015876389.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2406532 2407194 . - . ID=gene-NIV78_RS11285;Name=NIV78_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11285 NZ_CP100136.1 Protein Homology CDS 2406532 2407194 . - 0 ID=cds-WP_015876390.1;Parent=gene-NIV78_RS11285;Dbxref=Genbank:WP_015876390.1;Name=WP_015876390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876390.1;locus_tag=NIV78_RS11285;product=site-2 protease family protein;protein_id=WP_015876390.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2407286 2407921 . - . ID=gene-NIV78_RS11290;Name=NIV78_RS11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11290 NZ_CP100136.1 Protein Homology CDS 2407286 2407921 . - 0 ID=cds-WP_015876391.1;Parent=gene-NIV78_RS11290;Dbxref=Genbank:WP_015876391.1;Name=WP_015876391.1;Ontology_term=GO:0006400,GO:0061710;gbkey=CDS;go_function=L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876391.1;locus_tag=NIV78_RS11290;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_015876391.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2408007 2408837 . - . ID=gene-NIV78_RS11295;Name=NIV78_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11295 NZ_CP100136.1 Protein Homology CDS 2408007 2408837 . - 0 ID=cds-WP_017923627.1;Parent=gene-NIV78_RS11295;Dbxref=Genbank:WP_017923627.1;Name=WP_017923627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723269.1;locus_tag=NIV78_RS11295;product=PHP domain-containing protein;protein_id=WP_017923627.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2408959 2409855 . - . ID=gene-NIV78_RS11300;Name=NIV78_RS11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11300 NZ_CP100136.1 Protein Homology CDS 2408959 2409855 . - 0 ID=cds-WP_017432935.1;Parent=gene-NIV78_RS11300;Dbxref=Genbank:WP_017432935.1;Name=WP_017432935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493759.1;locus_tag=NIV78_RS11300;product=alpha/beta hydrolase;protein_id=WP_017432935.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2409995 2410852 . - . ID=gene-NIV78_RS11305;Name=NIV78_RS11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11305 NZ_CP100136.1 Protein Homology CDS 2409995 2410852 . - 0 ID=cds-WP_124836581.1;Parent=gene-NIV78_RS11305;Dbxref=Genbank:WP_124836581.1;Name=WP_124836581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876394.1;locus_tag=NIV78_RS11305;product=ferritin-like domain-containing protein;protein_id=WP_124836581.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2411033 2411557 . + . ID=gene-NIV78_RS11310;Name=NIV78_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11310 NZ_CP100136.1 Protein Homology CDS 2411033 2411557 . + 0 ID=cds-WP_017923197.1;Parent=gene-NIV78_RS11310;Dbxref=Genbank:WP_017923197.1;Name=WP_017923197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890200.1;locus_tag=NIV78_RS11310;product=gamma carbonic anhydrase family protein;protein_id=WP_017923197.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2411596 2412546 . + . ID=gene-NIV78_RS11315;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=NIV78_RS11315 NZ_CP100136.1 Protein Homology CDS 2411596 2412546 . + 0 ID=cds-WP_015876396.1;Parent=gene-NIV78_RS11315;Dbxref=Genbank:WP_015876396.1;Name=WP_015876396.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602261.1;locus_tag=NIV78_RS11315;product=Hsp33 family molecular chaperone HslO;protein_id=WP_015876396.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2412598 2412993 . + . ID=gene-NIV78_RS11320;Name=NIV78_RS11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11320 NZ_CP100136.1 Protein Homology CDS 2412598 2412993 . + 0 ID=cds-WP_017923196.1;Parent=gene-NIV78_RS11320;Dbxref=Genbank:WP_017923196.1;Name=WP_017923196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876397.1;locus_tag=NIV78_RS11320;product=hypothetical protein;protein_id=WP_017923196.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2413102 2413521 . - . ID=gene-NIV78_RS11325;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=NIV78_RS11325 NZ_CP100136.1 Protein Homology CDS 2413102 2413521 . - 0 ID=cds-WP_017923195.1;Parent=gene-NIV78_RS11325;Dbxref=Genbank:WP_017923195.1;Name=WP_017923195.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876398.1;locus_tag=NIV78_RS11325;product=cell division protein FtsB;protein_id=WP_017923195.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2413604 2414887 . - . ID=gene-NIV78_RS11330;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=NIV78_RS11330 NZ_CP100136.1 Protein Homology CDS 2413604 2414887 . - 0 ID=cds-WP_015876399.1;Parent=gene-NIV78_RS11330;Dbxref=Genbank:WP_015876399.1;Name=WP_015876399.1;Ontology_term=GO:0006096,GO:0004634;gbkey=CDS;gene=eno;go_function=phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011001079.1;locus_tag=NIV78_RS11330;product=phosphopyruvate hydratase;protein_id=WP_015876399.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2414985 2415839 . - . ID=gene-NIV78_RS11335;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=NIV78_RS11335 NZ_CP100136.1 Protein Homology CDS 2414985 2415839 . - 0 ID=cds-WP_017923194.1;Parent=gene-NIV78_RS11335;Dbxref=Genbank:WP_017923194.1;Name=WP_017923194.1;Ontology_term=GO:0009058,GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364209.1;locus_tag=NIV78_RS11335;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_017923194.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2415836 2417497 . - . ID=gene-NIV78_RS11340;Name=NIV78_RS11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11340 NZ_CP100136.1 Protein Homology CDS 2415836 2417497 . - 0 ID=cds-WP_015876401.1;Parent=gene-NIV78_RS11340;Dbxref=Genbank:WP_015876401.1;Name=WP_015876401.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401937.1;locus_tag=NIV78_RS11340;product=CTP synthase;protein_id=WP_015876401.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2417688 2418500 . - . ID=gene-NIV78_RS11345;Name=NIV78_RS11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11345 NZ_CP100136.1 Protein Homology CDS 2417688 2418500 . - 0 ID=cds-WP_015876402.1;Parent=gene-NIV78_RS11345;Dbxref=Genbank:WP_015876402.1;Name=WP_015876402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876402.1;locus_tag=NIV78_RS11345;product=alpha/beta hydrolase;protein_id=WP_015876402.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2418736 2421330 . - . ID=gene-NIV78_RS11350;Name=NIV78_RS11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11350 NZ_CP100136.1 Protein Homology CDS 2418736 2421330 . - 0 ID=cds-WP_251107081.1;Parent=gene-NIV78_RS11350;Dbxref=Genbank:WP_251107081.1;Name=WP_251107081.1;Ontology_term=GO:0009290,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=DNA import into cell involved in transformation|0009290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876403.1;locus_tag=NIV78_RS11350;product=DNA internalization-related competence protein ComEC/Rec2;protein_id=WP_251107081.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2421575 2422363 . - . ID=gene-NIV78_RS11355;Name=NIV78_RS11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11355 NZ_CP100136.1 Protein Homology CDS 2421575 2422363 . - 0 ID=cds-WP_017425233.1;Parent=gene-NIV78_RS11355;Dbxref=Genbank:WP_017425233.1;Name=WP_017425233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425233.1;locus_tag=NIV78_RS11355;product=TatD family hydrolase;protein_id=WP_017425233.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2422368 2423093 . - . ID=gene-NIV78_RS11360;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=NIV78_RS11360 NZ_CP100136.1 Protein Homology CDS 2422368 2423093 . - 0 ID=cds-WP_017425234.1;Parent=gene-NIV78_RS11360;Dbxref=Genbank:WP_017425234.1;Name=WP_017425234.1;Ontology_term=GO:0042953,GO:0005524,GO:0043190;gbkey=CDS;gene=lolD;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425234.1;locus_tag=NIV78_RS11360;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_017425234.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2423113 2424366 . - . ID=gene-NIV78_RS11365;Name=NIV78_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11365 NZ_CP100136.1 Protein Homology CDS 2423113 2424366 . - 0 ID=cds-WP_015876406.1;Parent=gene-NIV78_RS11365;Dbxref=Genbank:WP_015876406.1;Name=WP_015876406.1;Ontology_term=GO:0042953,GO:0005887;gbkey=CDS;go_component=integral component of plasma membrane|0005887||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532144.1;locus_tag=NIV78_RS11365;product=lipoprotein-releasing ABC transporter permease subunit;protein_id=WP_015876406.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2424691 2425809 . + . ID=gene-NIV78_RS11370;Name=NIV78_RS11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11370 NZ_CP100136.1 Protein Homology CDS 2424691 2425809 . + 0 ID=cds-WP_257756785.1;Parent=gene-NIV78_RS11370;Dbxref=Genbank:WP_257756785.1;Name=WP_257756785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657369.1;locus_tag=NIV78_RS11370;product=regulator;protein_id=WP_257756785.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2425819 2427513 . + . ID=gene-NIV78_RS11375;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=NIV78_RS11375 NZ_CP100136.1 Protein Homology CDS 2425819 2427513 . + 0 ID=cds-WP_015876408.1;Parent=gene-NIV78_RS11375;Dbxref=Genbank:WP_015876408.1;Name=WP_015876408.1;Ontology_term=GO:0006310,GO:0008297;gbkey=CDS;gene=recJ;go_function=single-stranded DNA exodeoxyribonuclease activity|0008297||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876408.1;locus_tag=NIV78_RS11375;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_015876408.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2427758 2428862 . + . ID=gene-NIV78_RS11380;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=NIV78_RS11380 NZ_CP100136.1 Protein Homology CDS 2427758 2427838 . + 0 ID=cds-WP_100555746.1;Parent=gene-NIV78_RS11380;Dbxref=Genbank:WP_100555746.1;Name=WP_100555746.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006998981.1;locus_tag=NIV78_RS11380;product=peptide chain release factor 2;protein_id=WP_100555746.1;transl_table=11 NZ_CP100136.1 Protein Homology CDS 2427840 2428862 . + 0 ID=cds-WP_100555746.1;Parent=gene-NIV78_RS11380;Dbxref=Genbank:WP_100555746.1;Name=WP_100555746.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006998981.1;locus_tag=NIV78_RS11380;product=peptide chain release factor 2;protein_id=WP_100555746.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2429002 2430528 . + . ID=gene-NIV78_RS11385;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=NIV78_RS11385 NZ_CP100136.1 Protein Homology CDS 2429002 2430528 . + 0 ID=cds-WP_017922723.1;Parent=gene-NIV78_RS11385;Dbxref=Genbank:WP_017922723.1;Name=WP_017922723.1;Ontology_term=GO:0006430,GO:0004824,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091959.1;locus_tag=NIV78_RS11385;product=lysine--tRNA ligase;protein_id=WP_017922723.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2430829 2431503 . + . ID=gene-NIV78_RS11390;Name=NIV78_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11390 NZ_CP100136.1 Protein Homology CDS 2430829 2431503 . + 0 ID=cds-WP_124836578.1;Parent=gene-NIV78_RS11390;Dbxref=Genbank:WP_124836578.1;Name=WP_124836578.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424130.1;locus_tag=NIV78_RS11390;product=glycine zipper 2TM domain-containing protein;protein_id=WP_124836578.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2431668 2431874 . - . ID=gene-NIV78_RS11395;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=NIV78_RS11395 NZ_CP100136.1 Protein Homology CDS 2431668 2431874 . - 0 ID=cds-WP_015876411.1;Parent=gene-NIV78_RS11395;Dbxref=Genbank:WP_015876411.1;Name=WP_015876411.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876411.1;locus_tag=NIV78_RS11395;product=Fe-S cluster assembly protein IscX;protein_id=WP_015876411.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2431900 2432241 . - . ID=gene-NIV78_RS11400;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=NIV78_RS11400 NZ_CP100136.1 Protein Homology CDS 2431900 2432241 . - 0 ID=cds-WP_015876412.1;Parent=gene-NIV78_RS11400;Dbxref=Genbank:WP_015876412.1;Name=WP_015876412.1;Ontology_term=GO:0016226;gbkey=CDS;gene=fdx;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193872.1;locus_tag=NIV78_RS11400;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_015876412.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2432309 2434177 . - . ID=gene-NIV78_RS11405;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=NIV78_RS11405 NZ_CP100136.1 Protein Homology CDS 2432309 2434177 . - 0 ID=cds-WP_017922726.1;Parent=gene-NIV78_RS11405;Dbxref=Genbank:WP_017922726.1;Name=WP_017922726.1;Ontology_term=GO:0006457,GO:0005515;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876413.1;locus_tag=NIV78_RS11405;product=Fe-S protein assembly chaperone HscA;protein_id=WP_017922726.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2434249 2434776 . - . ID=gene-NIV78_RS11410;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=NIV78_RS11410 NZ_CP100136.1 Protein Homology CDS 2434249 2434776 . - 0 ID=cds-WP_017424133.1;Parent=gene-NIV78_RS11410;Dbxref=Genbank:WP_017424133.1;Name=WP_017424133.1;Ontology_term=GO:0051259,GO:0097428,GO:0051087;gbkey=CDS;gene=hscB;go_function=chaperone binding|0051087||IEA;go_process=protein complex oligomerization|0051259||IEA,protein maturation by iron-sulfur cluster transfer|0097428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876414.1;locus_tag=NIV78_RS11410;product=Fe-S protein assembly co-chaperone HscB;protein_id=WP_017424133.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2434883 2435206 . - . ID=gene-NIV78_RS11415;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=NIV78_RS11415 NZ_CP100136.1 Protein Homology CDS 2434883 2435206 . - 0 ID=cds-WP_015876415.1;Parent=gene-NIV78_RS11415;Dbxref=Genbank:WP_015876415.1;Name=WP_015876415.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscA;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017777993.1;locus_tag=NIV78_RS11415;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_015876415.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2435301 2435708 . - . ID=gene-NIV78_RS11420;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=NIV78_RS11420 NZ_CP100136.1 Protein Homology CDS 2435301 2435708 . - 0 ID=cds-WP_017424134.1;Parent=gene-NIV78_RS11420;Dbxref=Genbank:WP_017424134.1;Name=WP_017424134.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424134.1;locus_tag=NIV78_RS11420;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_017424134.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2435761 2436984 . - . ID=gene-NIV78_RS11425;Name=NIV78_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11425 NZ_CP100136.1 Protein Homology CDS 2435761 2436984 . - 0 ID=cds-WP_017922727.1;Parent=gene-NIV78_RS11425;Dbxref=Genbank:WP_017922727.1;Name=WP_017922727.1;Ontology_term=GO:0044571,GO:0030170,GO:0031071;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=[2Fe-2S] cluster assembly|0044571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698736.1;locus_tag=NIV78_RS11425;product=IscS subfamily cysteine desulfurase;protein_id=WP_017922727.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2437069 2437605 . - . ID=gene-NIV78_RS11430;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=NIV78_RS11430 NZ_CP100136.1 Protein Homology CDS 2437069 2437605 . - 0 ID=cds-WP_015876418.1;Parent=gene-NIV78_RS11430;Dbxref=Genbank:WP_015876418.1;Name=WP_015876418.1;Ontology_term=GO:0006355,GO:0003690,GO:0003700;gbkey=CDS;gene=iscR;go_function=double-stranded DNA binding|0003690||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195928.1;locus_tag=NIV78_RS11430;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_015876418.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2437729 2438211 . - . ID=gene-NIV78_RS11435;Name=NIV78_RS11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11435 NZ_CP100136.1 Protein Homology CDS 2437729 2438211 . - 0 ID=cds-WP_017922728.1;Parent=gene-NIV78_RS11435;Dbxref=Genbank:WP_017922728.1;Name=WP_017922728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876419.1;locus_tag=NIV78_RS11435;product=low molecular weight phosphotyrosine protein phosphatase;protein_id=WP_017922728.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2438303 2438518 . - . ID=gene-NIV78_RS11440;Name=NIV78_RS11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11440 NZ_CP100136.1 Protein Homology CDS 2438303 2438518 . - 0 ID=cds-WP_015876420.1;Parent=gene-NIV78_RS11440;Dbxref=Genbank:WP_015876420.1;Name=WP_015876420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876420.1;locus_tag=NIV78_RS11440;product=hypothetical protein;protein_id=WP_015876420.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2438720 2440141 . - . ID=gene-NIV78_RS11445;Name=NIV78_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11445 NZ_CP100136.1 Protein Homology CDS 2438720 2440141 . - 0 ID=cds-WP_017424136.1;Parent=gene-NIV78_RS11445;Dbxref=Genbank:WP_017424136.1;Name=WP_017424136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408173.1;locus_tag=NIV78_RS11445;product=lactate utilization protein;protein_id=WP_017424136.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2440195 2440917 . - . ID=gene-NIV78_RS11450;Name=NIV78_RS11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11450 NZ_CP100136.1 Protein Homology CDS 2440195 2440917 . - 0 ID=cds-WP_015876422.1;Parent=gene-NIV78_RS11450;Dbxref=Genbank:WP_015876422.1;Name=WP_015876422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549455.1;locus_tag=NIV78_RS11450;product=(Fe-S)-binding protein;protein_id=WP_015876422.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2441108 2441917 . + . ID=gene-NIV78_RS11455;Name=NIV78_RS11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11455 NZ_CP100136.1 Protein Homology CDS 2441108 2441917 . + 0 ID=cds-WP_017424138.1;Parent=gene-NIV78_RS11455;Dbxref=Genbank:WP_017424138.1;Name=WP_017424138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424138.1;locus_tag=NIV78_RS11455;product=IclR family transcriptional regulator;protein_id=WP_017424138.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2442030 2443169 . - . ID=gene-NIV78_RS11460;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=NIV78_RS11460 NZ_CP100136.1 Protein Homology CDS 2442030 2443169 . - 0 ID=cds-WP_015876424.1;Parent=gene-NIV78_RS11460;Dbxref=Genbank:WP_015876424.1;Name=WP_015876424.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401961.1;locus_tag=NIV78_RS11460;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_015876424.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2443855 2444436 . + . ID=gene-NIV78_RS11465;Name=phaP;gbkey=Gene;gene=phaP;gene_biotype=protein_coding;locus_tag=NIV78_RS11465 NZ_CP100136.1 Protein Homology CDS 2443855 2444436 . + 0 ID=cds-WP_015876425.1;Parent=gene-NIV78_RS11465;Dbxref=Genbank:WP_015876425.1;Name=WP_015876425.1;Note=Members of this family are phasins (small proteins associated with inclusions such as PHA granules). Note that several different families of phasins have been named PhaP despite very little sequence similarity to each other.;gbkey=CDS;gene=phaP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876425.1;locus_tag=NIV78_RS11465;product=TIGR01841 family phasin;protein_id=WP_015876425.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2444686 2446455 . - . ID=gene-NIV78_RS11470;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=NIV78_RS11470 NZ_CP100136.1 Protein Homology CDS 2444686 2446455 . - 0 ID=cds-WP_015876426.1;Parent=gene-NIV78_RS11470;Dbxref=Genbank:WP_015876426.1;Name=WP_015876426.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213072.1;locus_tag=NIV78_RS11470;product=dihydrolipoyl dehydrogenase;protein_id=WP_015876426.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2446607 2448232 . - . ID=gene-NIV78_RS11475;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=NIV78_RS11475 NZ_CP100136.1 Protein Homology CDS 2446607 2448232 . - 0 ID=cds-WP_017922996.1;Parent=gene-NIV78_RS11475;Dbxref=Genbank:WP_017922996.1;Name=WP_017922996.1;Ontology_term=GO:0006086,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328826.1;locus_tag=NIV78_RS11475;product=dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_017922996.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2448299 2450995 . - . ID=gene-NIV78_RS11480;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=NIV78_RS11480 NZ_CP100136.1 Protein Homology CDS 2448299 2450995 . - 0 ID=cds-WP_015876428.1;Parent=gene-NIV78_RS11480;Dbxref=Genbank:WP_015876428.1;Name=WP_015876428.1;Ontology_term=GO:0006086,GO:0004738,GO:0045250;gbkey=CDS;gene=aceE;go_component=cytosolic pyruvate dehydrogenase complex|0045250||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478378.1;locus_tag=NIV78_RS11480;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_015876428.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2451259 2453763 . + . ID=gene-NIV78_RS11485;Name=fixL;gbkey=Gene;gene=fixL;gene_biotype=protein_coding;locus_tag=NIV78_RS11485 NZ_CP100136.1 Protein Homology CDS 2451259 2453763 . + 0 ID=cds-WP_015876429.1;Parent=gene-NIV78_RS11485;Dbxref=Genbank:WP_015876429.1;Name=WP_015876429.1;gbkey=CDS;gene=fixL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758934.1;locus_tag=NIV78_RS11485;product=oxygen sensor histidine kinase FixL;protein_id=WP_015876429.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2453760 2454398 . + . ID=gene-NIV78_RS11490;Name=fixJ;gbkey=Gene;gene=fixJ;gene_biotype=protein_coding;locus_tag=NIV78_RS11490 NZ_CP100136.1 Protein Homology CDS 2453760 2454398 . + 0 ID=cds-WP_015876430.1;Parent=gene-NIV78_RS11490;Dbxref=Genbank:WP_015876430.1;Name=WP_015876430.1;gbkey=CDS;gene=fixJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698749.1;locus_tag=NIV78_RS11490;product=oxygen response regulator transcription factor FixJ;protein_id=WP_015876430.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2454703 2455563 . + . ID=gene-NIV78_RS11495;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=NIV78_RS11495 NZ_CP100136.1 Protein Homology CDS 2454703 2455563 . + 0 ID=cds-WP_017922994.1;Parent=gene-NIV78_RS11495;Dbxref=Genbank:WP_017922994.1;Name=WP_017922994.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328828.1;locus_tag=NIV78_RS11495;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_017922994.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2455802 2457889 . + . ID=gene-NIV78_RS11500;Name=NIV78_RS11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11500 NZ_CP100136.1 Protein Homology CDS 2455802 2457889 . + 0 ID=cds-WP_015876432.1;Parent=gene-NIV78_RS11500;Dbxref=Genbank:WP_015876432.1;Name=WP_015876432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213068.1;locus_tag=NIV78_RS11500;product=M3 family metallopeptidase;protein_id=WP_015876432.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2457998 2459299 . - . ID=gene-NIV78_RS11505;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=NIV78_RS11505 NZ_CP100136.1 Protein Homology CDS 2457998 2459299 . - 0 ID=cds-WP_241766819.1;Parent=gene-NIV78_RS11505;Dbxref=Genbank:WP_241766819.1;Name=WP_241766819.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876433.1;locus_tag=NIV78_RS11505;product=DNA polymerase IV;protein_id=WP_241766819.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2459816 2460451 . + . ID=gene-NIV78_RS11510;Name=NIV78_RS11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11510 NZ_CP100136.1 Protein Homology CDS 2459816 2460451 . + 0 ID=cds-WP_257756790.1;Parent=gene-NIV78_RS11510;Dbxref=Genbank:WP_257756790.1;Name=WP_257756790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876434.1;locus_tag=NIV78_RS11510;product=LysE family translocator;protein_id=WP_257756790.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2460661 2460897 . + . ID=gene-NIV78_RS11515;Name=NIV78_RS11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11515 NZ_CP100136.1 GeneMarkS-2+ CDS 2460661 2460897 . + 0 ID=cds-WP_241766821.1;Parent=gene-NIV78_RS11515;Dbxref=Genbank:WP_241766821.1;Name=WP_241766821.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS11515;product=hypothetical protein;protein_id=WP_241766821.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2460903 2461415 . + . ID=gene-NIV78_RS11520;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=NIV78_RS11520 NZ_CP100136.1 Protein Homology CDS 2460903 2461415 . + 0 ID=cds-WP_241766822.1;Parent=gene-NIV78_RS11520;Dbxref=Genbank:WP_241766822.1;Name=WP_241766822.1;Ontology_term=GO:0006790,GO:0004020;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876435.1;locus_tag=NIV78_RS11520;product=adenylyl-sulfate kinase;protein_id=WP_241766822.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 2461577 2461912 . + . ID=gene-NIV78_RS11525;Name=NIV78_RS11525;end_range=2461912,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS11525;partial=true;pseudo=true NZ_CP100136.1 Protein Homology CDS 2461577 2461912 . + 0 ID=cds-NIV78_RS11525;Parent=gene-NIV78_RS11525;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006807,GO:0036361;end_range=2461912,.;gbkey=CDS;go_function=racemase activity%2C acting on amino acids and derivatives|0036361||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755476.1;locus_tag=NIV78_RS11525;partial=true;product=aspartate/glutamate racemase family protein;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 2462547 2462795 . - . ID=gene-NIV78_RS11530;Name=NIV78_RS11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11530 NZ_CP100136.1 Protein Homology CDS 2462547 2462795 . - 0 ID=cds-WP_017423657.1;Parent=gene-NIV78_RS11530;Dbxref=Genbank:WP_017423657.1;Name=WP_017423657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423657.1;locus_tag=NIV78_RS11530;product=pentapeptide MXKDX repeat protein;protein_id=WP_017423657.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2462868 2463644 . - . ID=gene-NIV78_RS11535;Name=NIV78_RS11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11535 NZ_CP100136.1 Protein Homology CDS 2462868 2463644 . - 0 ID=cds-WP_257756794.1;Parent=gene-NIV78_RS11535;Dbxref=Genbank:WP_257756794.1;Name=WP_257756794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012404274.1;locus_tag=NIV78_RS11535;product=molybdopterin-dependent oxidoreductase;protein_id=WP_257756794.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2463701 2464336 . - . ID=gene-NIV78_RS11540;Name=NIV78_RS11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11540 NZ_CP100136.1 Protein Homology CDS 2463701 2464336 . - 0 ID=cds-WP_169511982.1;Parent=gene-NIV78_RS11540;Dbxref=Genbank:WP_169511982.1;Name=WP_169511982.1;Ontology_term=GO:0009055,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007731179.1;locus_tag=NIV78_RS11540;product=cytochrome b/b6 domain-containing protein;protein_id=WP_169511982.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2464335 2464634 . + . ID=gene-NIV78_RS11545;Name=NIV78_RS11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11545 NZ_CP100136.1 GeneMarkS-2+ CDS 2464335 2464634 . + 0 ID=cds-WP_169511983.1;Parent=gene-NIV78_RS11545;Dbxref=Genbank:WP_169511983.1;Name=WP_169511983.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS11545;product=hypothetical protein;protein_id=WP_169511983.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2464747 2465295 . + . ID=gene-NIV78_RS11550;Name=NIV78_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11550 NZ_CP100136.1 Protein Homology CDS 2464747 2465295 . + 0 ID=cds-WP_017923007.1;Parent=gene-NIV78_RS11550;Dbxref=Genbank:WP_017923007.1;Name=WP_017923007.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876440.1;locus_tag=NIV78_RS11550;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_017923007.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2465368 2465994 . - . ID=gene-NIV78_RS11555;Name=NIV78_RS11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11555 NZ_CP100136.1 Protein Homology CDS 2465368 2465994 . - 0 ID=cds-WP_017923008.1;Parent=gene-NIV78_RS11555;Dbxref=Genbank:WP_017923008.1;Name=WP_017923008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423654.1;locus_tag=NIV78_RS11555;product=TetR/AcrR family transcriptional regulator;protein_id=WP_017923008.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2466580 2466656 . - . ID=gene-NIV78_RS11560;Name=NIV78_RS11560;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS11560 NZ_CP100136.1 tRNAscan-SE tRNA 2466580 2466656 . - . ID=rna-NIV78_RS11560;Parent=gene-NIV78_RS11560;anticodon=(pos:complement(2466620..2466622));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS11560;product=tRNA-Met NZ_CP100136.1 tRNAscan-SE exon 2466580 2466656 . - . ID=exon-NIV78_RS11560-1;Parent=rna-NIV78_RS11560;anticodon=(pos:complement(2466620..2466622));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS11560;product=tRNA-Met NZ_CP100136.1 RefSeq gene 2466831 2467607 . + . ID=gene-NIV78_RS11565;Name=xth;gbkey=Gene;gene=xth;gene_biotype=protein_coding;locus_tag=NIV78_RS11565 NZ_CP100136.1 Protein Homology CDS 2466831 2467607 . + 0 ID=cds-WP_017423653.1;Parent=gene-NIV78_RS11565;Dbxref=Genbank:WP_017423653.1;Name=WP_017423653.1;Ontology_term=GO:0006281,GO:0008853;gbkey=CDS;gene=xth;go_function=exodeoxyribonuclease III activity|0008853||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423653.1;locus_tag=NIV78_RS11565;product=exodeoxyribonuclease III;protein_id=WP_017423653.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2467667 2469775 . - . ID=gene-NIV78_RS11570;Name=NIV78_RS11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11570 NZ_CP100136.1 Protein Homology CDS 2467667 2469775 . - 0 ID=cds-WP_017922711.1;Parent=gene-NIV78_RS11570;Dbxref=Genbank:WP_017922711.1;Name=WP_017922711.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876443.1;locus_tag=NIV78_RS11570;product=prolyl oligopeptidase family serine peptidase;protein_id=WP_017922711.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2469948 2471435 . - . ID=gene-NIV78_RS11575;Name=ntrC;gbkey=Gene;gene=ntrC;gene_biotype=protein_coding;locus_tag=NIV78_RS11575 NZ_CP100136.1 Protein Homology CDS 2469948 2471435 . - 0 ID=cds-WP_015876444.1;Parent=gene-NIV78_RS11575;Dbxref=Genbank:WP_015876444.1;Name=WP_015876444.1;Ontology_term=GO:0000160,GO:0006808,GO:0000156,GO:0003677;gbkey=CDS;gene=ntrC;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413938.1;locus_tag=NIV78_RS11575;product=nitrogen regulation protein NR(I);protein_id=WP_015876444.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2471475 2472617 . - . ID=gene-NIV78_RS11580;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=NIV78_RS11580 NZ_CP100136.1 Protein Homology CDS 2471475 2472617 . - 0 ID=cds-WP_015876445.1;Parent=gene-NIV78_RS11580;Dbxref=Genbank:WP_015876445.1;Name=WP_015876445.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192981.1;locus_tag=NIV78_RS11580;product=nitrogen regulation protein NR(II);protein_id=WP_015876445.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2472782 2474197 . - . ID=gene-NIV78_RS11585;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=NIV78_RS11585 NZ_CP100136.1 Protein Homology CDS 2472782 2474197 . - 0 ID=cds-WP_015876446.1;Parent=gene-NIV78_RS11585;Dbxref=Genbank:WP_015876446.1;Name=WP_015876446.1;Ontology_term=GO:0006542,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamate-ammonia ligase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017777963.1;locus_tag=NIV78_RS11585;product=type I glutamate--ammonia ligase;protein_id=WP_015876446.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2474574 2475038 . + . ID=gene-NIV78_RS11590;Name=NIV78_RS11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11590 NZ_CP100136.1 Protein Homology CDS 2474574 2475038 . + 0 ID=cds-WP_015876447.1;Parent=gene-NIV78_RS11590;Dbxref=Genbank:WP_015876447.1;Name=WP_015876447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010116266.1;locus_tag=NIV78_RS11590;product=rhodanese-like domain-containing protein;protein_id=WP_015876447.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2475151 2475966 . - . ID=gene-NIV78_RS11595;Name=NIV78_RS11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11595 NZ_CP100136.1 Protein Homology CDS 2475151 2475966 . - 0 ID=cds-WP_017423651.1;Parent=gene-NIV78_RS11595;Dbxref=Genbank:WP_017423651.1;Name=WP_017423651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876448.1;locus_tag=NIV78_RS11595;product=molybdopterin-binding protein;protein_id=WP_017423651.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2475963 2476793 . - . ID=gene-NIV78_RS11600;Name=NIV78_RS11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11600 NZ_CP100136.1 Protein Homology CDS 2475963 2476793 . - 0 ID=cds-WP_017423650.1;Parent=gene-NIV78_RS11600;Dbxref=Genbank:WP_017423650.1;Name=WP_017423650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876449.1;locus_tag=NIV78_RS11600;product=EI24 domain-containing protein;protein_id=WP_017423650.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2477082 2478074 . - . ID=gene-NIV78_RS11605;Name=NIV78_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11605 NZ_CP100136.1 Protein Homology CDS 2477082 2478074 . - 0 ID=cds-WP_015876450.1;Parent=gene-NIV78_RS11605;Dbxref=Genbank:WP_015876450.1;Name=WP_015876450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423649.1;locus_tag=NIV78_RS11605;product=sterol desaturase family protein;protein_id=WP_015876450.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2478091 2479089 . - . ID=gene-NIV78_RS11610;Name=NIV78_RS11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11610 NZ_CP100136.1 Protein Homology CDS 2478091 2479089 . - 0 ID=cds-WP_017423648.1;Parent=gene-NIV78_RS11610;Dbxref=Genbank:WP_017423648.1;Name=WP_017423648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600540.1;locus_tag=NIV78_RS11610;product=beta-propeller fold lactonase family protein;protein_id=WP_017423648.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2479189 2483421 . - . ID=gene-NIV78_RS11615;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=NIV78_RS11615 NZ_CP100136.1 Protein Homology CDS 2479189 2483421 . - 0 ID=cds-WP_015876452.1;Parent=gene-NIV78_RS11615;Dbxref=Genbank:WP_015876452.1;Name=WP_015876452.1;Ontology_term=GO:0006139,GO:0004386;gbkey=CDS;gene=hrpA;go_function=helicase activity|0004386||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004544130.1;locus_tag=NIV78_RS11615;product=ATP-dependent RNA helicase HrpA;protein_id=WP_015876452.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2483445 2484812 . + . ID=gene-NIV78_RS11620;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=NIV78_RS11620 NZ_CP100136.1 Protein Homology CDS 2483445 2484812 . + 0 ID=cds-WP_015876453.1;Parent=gene-NIV78_RS11620;Dbxref=Genbank:WP_015876453.1;Name=WP_015876453.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=acetyl-CoA:L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602335.1;locus_tag=NIV78_RS11620;product=amino-acid N-acetyltransferase;protein_id=WP_015876453.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2484862 2485137 . + . ID=gene-NIV78_RS11625;Name=NIV78_RS11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11625 NZ_CP100136.1 Protein Homology CDS 2484862 2485137 . + 0 ID=cds-WP_015876454.1;Parent=gene-NIV78_RS11625;Dbxref=Genbank:WP_015876454.1;Name=WP_015876454.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401987.1;locus_tag=NIV78_RS11625;product=oxidative damage protection protein;protein_id=WP_015876454.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2485381 2485455 . + . ID=gene-NIV78_RS11630;Name=NIV78_RS11630;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS11630 NZ_CP100136.1 tRNAscan-SE tRNA 2485381 2485455 . + . ID=rna-NIV78_RS11630;Parent=gene-NIV78_RS11630;anticodon=(pos:2485413..2485415);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS11630;product=tRNA-Val NZ_CP100136.1 tRNAscan-SE exon 2485381 2485455 . + . ID=exon-NIV78_RS11630-1;Parent=rna-NIV78_RS11630;anticodon=(pos:2485413..2485415);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS11630;product=tRNA-Val NZ_CP100136.1 RefSeq gene 2485668 2486165 . - . ID=gene-NIV78_RS11635;Name=NIV78_RS11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11635 NZ_CP100136.1 Protein Homology CDS 2485668 2486165 . - 0 ID=cds-WP_017923411.1;Parent=gene-NIV78_RS11635;Dbxref=Genbank:WP_017923411.1;Name=WP_017923411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876455.1;locus_tag=NIV78_RS11635;product=DUF2846 domain-containing protein;protein_id=WP_017923411.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2486459 2487886 . - . ID=gene-NIV78_RS11640;Name=NIV78_RS11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11640 NZ_CP100136.1 Protein Homology CDS 2486459 2487886 . - 0 ID=cds-WP_251107082.1;Parent=gene-NIV78_RS11640;Dbxref=Genbank:WP_251107082.1;Name=WP_251107082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004539704.1;locus_tag=NIV78_RS11640;product=aminotransferase;protein_id=WP_251107082.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2487934 2489268 . - . ID=gene-NIV78_RS11645;Name=NIV78_RS11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11645 NZ_CP100136.1 Protein Homology CDS 2487934 2489268 . - 0 ID=cds-WP_015876457.1;Parent=gene-NIV78_RS11645;Dbxref=Genbank:WP_015876457.1;Name=WP_015876457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851914.1;locus_tag=NIV78_RS11645;product=glutamine synthetase family protein;protein_id=WP_015876457.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2489314 2490096 . - . ID=gene-NIV78_RS11650;Name=NIV78_RS11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11650 NZ_CP100136.1 Protein Homology CDS 2489314 2490096 . - 0 ID=cds-WP_015876458.1;Parent=gene-NIV78_RS11650;Dbxref=Genbank:WP_015876458.1;Name=WP_015876458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876458.1;locus_tag=NIV78_RS11650;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=WP_015876458.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2490293 2490583 . - . ID=gene-NIV78_RS11655;Name=NIV78_RS11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11655 NZ_CP100136.1 GeneMarkS-2+ CDS 2490293 2490583 . - 0 ID=cds-WP_230674398.1;Parent=gene-NIV78_RS11655;Dbxref=Genbank:WP_230674398.1;Name=WP_230674398.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS11655;product=hypothetical protein;protein_id=WP_230674398.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2491025 2492512 . + . ID=gene-NIV78_RS11660;Name=NIV78_RS11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11660 NZ_CP100136.1 Protein Homology CDS 2491025 2492512 . + 0 ID=cds-WP_251107083.1;Parent=gene-NIV78_RS11660;Dbxref=Genbank:WP_251107083.1;Name=WP_251107083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876460.1;locus_tag=NIV78_RS11660;product=aldehyde dehydrogenase family protein;protein_id=WP_251107083.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2492568 2493371 . - . ID=gene-NIV78_RS11665;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=NIV78_RS11665 NZ_CP100136.1 Protein Homology CDS 2492568 2493371 . - 0 ID=cds-WP_015876461.1;Parent=gene-NIV78_RS11665;Dbxref=Genbank:WP_015876461.1;Name=WP_015876461.1;Ontology_term=GO:0019557,GO:0050129;gbkey=CDS;gene=hutG;go_function=N-formylglutamate deformylase activity|0050129||IEA;go_process=histidine catabolic process to glutamate and formate|0019557||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425439.1;locus_tag=NIV78_RS11665;product=N-formylglutamate deformylase;protein_id=WP_015876461.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2493432 2494808 . - . ID=gene-NIV78_RS11670;Name=NIV78_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11670 NZ_CP100136.1 Protein Homology CDS 2493432 2494808 . - 0 ID=cds-WP_015876462.1;Parent=gene-NIV78_RS11670;Dbxref=Genbank:WP_015876462.1;Name=WP_015876462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488097.1;locus_tag=NIV78_RS11670;product=formimidoylglutamate deiminase;protein_id=WP_015876462.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2494861 2496084 . - . ID=gene-NIV78_RS11675;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=NIV78_RS11675 NZ_CP100136.1 Protein Homology CDS 2494861 2496084 . - 0 ID=cds-WP_015876463.1;Parent=gene-NIV78_RS11675;Dbxref=Genbank:WP_015876463.1;Name=WP_015876463.1;Ontology_term=GO:0006548,GO:0050480;gbkey=CDS;gene=hutI;go_function=imidazolonepropionase activity|0050480||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424442.1;locus_tag=NIV78_RS11675;product=imidazolonepropionase;protein_id=WP_015876463.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2496089 2496721 . - . ID=gene-NIV78_RS11680;Name=NIV78_RS11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11680 NZ_CP100136.1 Protein Homology CDS 2496089 2496721 . - 0 ID=cds-WP_251107545.1;Parent=gene-NIV78_RS11680;Dbxref=Genbank:WP_251107545.1;Name=WP_251107545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876464.1;locus_tag=NIV78_RS11680;product=HutD family protein;protein_id=WP_251107545.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2496727 2498415 . - . ID=gene-NIV78_RS11685;Name=NIV78_RS11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11685 NZ_CP100136.1 Protein Homology CDS 2496727 2498415 . - 0 ID=cds-WP_015876465.1;Parent=gene-NIV78_RS11685;Dbxref=Genbank:WP_015876465.1;Name=WP_015876465.1;Ontology_term=GO:0016153;gbkey=CDS;go_function=urocanate hydratase activity|0016153||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600548.1;locus_tag=NIV78_RS11685;product=urocanate hydratase;protein_id=WP_015876465.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2498504 2499199 . - . ID=gene-NIV78_RS11690;Name=hutC;gbkey=Gene;gene=hutC;gene_biotype=protein_coding;locus_tag=NIV78_RS11690 NZ_CP100136.1 Protein Homology CDS 2498504 2499199 . - 0 ID=cds-WP_017923730.1;Parent=gene-NIV78_RS11690;Dbxref=Genbank:WP_017923730.1;Name=WP_017923730.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hutC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010116292.1;locus_tag=NIV78_RS11690;product=histidine utilization repressor;protein_id=WP_017923730.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2499204 2500727 . - . ID=gene-NIV78_RS11695;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=NIV78_RS11695 NZ_CP100136.1 Protein Homology CDS 2499204 2500727 . - 0 ID=cds-WP_017923729.1;Parent=gene-NIV78_RS11695;Dbxref=Genbank:WP_017923729.1;Name=WP_017923729.1;Ontology_term=GO:0006548,GO:0004397;gbkey=CDS;gene=hutH;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657420.1;locus_tag=NIV78_RS11695;product=histidine ammonia-lyase;protein_id=WP_017923729.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2501066 2501854 . - . ID=gene-NIV78_RS11700;Name=NIV78_RS11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11700 NZ_CP100136.1 Protein Homology CDS 2501066 2501854 . - 0 ID=cds-WP_015876468.1;Parent=gene-NIV78_RS11700;Dbxref=Genbank:WP_015876468.1;Name=WP_015876468.1;Ontology_term=GO:0000287,GO:0008897;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328851.1;locus_tag=NIV78_RS11700;product=4'-phosphopantetheinyl transferase superfamily protein;protein_id=WP_015876468.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2502008 2503471 . - . ID=gene-NIV78_RS11705;Name=NIV78_RS11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11705 NZ_CP100136.1 Protein Homology CDS 2502008 2503471 . - 0 ID=cds-WP_035982133.1;Parent=gene-NIV78_RS11705;Dbxref=Genbank:WP_035982133.1;Name=WP_035982133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698791.1;locus_tag=NIV78_RS11705;product=DNA photolyase family protein;protein_id=WP_035982133.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2504008 2505174 . + . ID=gene-NIV78_RS11710;Name=NIV78_RS11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11710 NZ_CP100136.1 Protein Homology CDS 2504008 2505174 . + 0 ID=cds-WP_015876470.1;Parent=gene-NIV78_RS11710;Dbxref=Genbank:WP_015876470.1;Name=WP_015876470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876470.1;locus_tag=NIV78_RS11710;product=alkane 1-monooxygenase;protein_id=WP_015876470.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2505423 2506868 . - . ID=gene-NIV78_RS11715;Name=NIV78_RS11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11715 NZ_CP100136.1 Protein Homology CDS 2505423 2506868 . - 0 ID=cds-WP_015876471.1;Parent=gene-NIV78_RS11715;Dbxref=Genbank:WP_015876471.1;Name=WP_015876471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397042.1;locus_tag=NIV78_RS11715;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_015876471.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2507120 2507380 . + . ID=gene-NIV78_RS11720;Name=NIV78_RS11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11720 NZ_CP100136.1 GeneMarkS-2+ CDS 2507120 2507380 . + 0 ID=cds-WP_251107085.1;Parent=gene-NIV78_RS11720;Dbxref=Genbank:WP_251107085.1;Name=WP_251107085.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS11720;product=hypothetical protein;protein_id=WP_251107085.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2507484 2508458 . - . ID=gene-NIV78_RS11725;Name=NIV78_RS11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11725 NZ_CP100136.1 Protein Homology CDS 2507484 2508458 . - 0 ID=cds-WP_017923956.1;Parent=gene-NIV78_RS11725;Dbxref=Genbank:WP_017923956.1;Name=WP_017923956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876472.1;locus_tag=NIV78_RS11725;product=AraC family transcriptional regulator;protein_id=WP_017923956.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2508886 2508976 . + . ID=gene-NIV78_RS11730;Name=NIV78_RS11730;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS11730 NZ_CP100136.1 tRNAscan-SE tRNA 2508886 2508976 . + . ID=rna-NIV78_RS11730;Parent=gene-NIV78_RS11730;anticodon=(pos:2508920..2508922);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS11730;product=tRNA-Ser NZ_CP100136.1 tRNAscan-SE exon 2508886 2508976 . + . ID=exon-NIV78_RS11730-1;Parent=rna-NIV78_RS11730;anticodon=(pos:2508920..2508922);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS11730;product=tRNA-Ser NZ_CP100136.1 RefSeq gene 2509086 2509580 . - . ID=gene-NIV78_RS11735;Name=NIV78_RS11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11735 NZ_CP100136.1 GeneMarkS-2+ CDS 2509086 2509580 . - 0 ID=cds-WP_157384182.1;Parent=gene-NIV78_RS11735;Dbxref=Genbank:WP_157384182.1;Name=WP_157384182.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS11735;product=hypothetical protein;protein_id=WP_157384182.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2509661 2510848 . - . ID=gene-NIV78_RS11740;Name=NIV78_RS11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11740 NZ_CP100136.1 GeneMarkS-2+ CDS 2509661 2510848 . - 0 ID=cds-WP_157384181.1;Parent=gene-NIV78_RS11740;Dbxref=Genbank:WP_157384181.1;Name=WP_157384181.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS11740;product=PAAR domain-containing protein;protein_id=WP_157384181.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 2511193 2511333 . + . ID=gene-NIV78_RS11745;Name=NIV78_RS11745;end_range=2511333,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS11745;partial=true;pseudo=true NZ_CP100136.1 Protein Homology CDS 2511193 2511333 . + 0 ID=cds-NIV78_RS11745;Parent=gene-NIV78_RS11745;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2511333,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611495.1;locus_tag=NIV78_RS11745;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 2511400 2511762 . + . ID=gene-NIV78_RS11750;Name=NIV78_RS11750;end_range=2511762,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS11750;partial=true;pseudo=true NZ_CP100136.1 Protein Homology CDS 2511400 2511762 . + 0 ID=cds-NIV78_RS11750;Parent=gene-NIV78_RS11750;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=2511762,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558181.1;locus_tag=NIV78_RS11750;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 2511975 2513936 . - . ID=gene-NIV78_RS11755;Name=NIV78_RS11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11755 NZ_CP100136.1 Protein Homology CDS 2511975 2513936 . - 0 ID=cds-WP_015876473.1;Parent=gene-NIV78_RS11755;Dbxref=Genbank:WP_015876473.1;Name=WP_015876473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876473.1;locus_tag=NIV78_RS11755;product=methyl-accepting chemotaxis protein;protein_id=WP_015876473.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2514180 2514455 . - . ID=gene-NIV78_RS11760;Name=NIV78_RS11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11760 NZ_CP100136.1 Protein Homology CDS 2514180 2514455 . - 0 ID=cds-WP_251107546.1;Parent=gene-NIV78_RS11760;Dbxref=Genbank:WP_251107546.1;Name=WP_251107546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876474.1;locus_tag=NIV78_RS11760;product=DUF3761 domain-containing protein;protein_id=WP_251107546.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2514548 2514811 . - . ID=gene-NIV78_RS11765;Name=NIV78_RS11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11765 NZ_CP100136.1 Protein Homology CDS 2514548 2514811 . - 0 ID=cds-WP_015876475.1;Parent=gene-NIV78_RS11765;Dbxref=Genbank:WP_015876475.1;Name=WP_015876475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876475.1;locus_tag=NIV78_RS11765;product=PAAR domain-containing protein;protein_id=WP_015876475.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2514879 2515313 . - . ID=gene-NIV78_RS11770;Name=NIV78_RS11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11770 NZ_CP100136.1 Protein Homology CDS 2514879 2515313 . - 0 ID=cds-WP_026051730.1;Parent=gene-NIV78_RS11770;Dbxref=Genbank:WP_026051730.1;Name=WP_026051730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698803.1;locus_tag=NIV78_RS11770;product=hypothetical protein;protein_id=WP_026051730.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2515310 2520100 . - . ID=gene-NIV78_RS11775;Name=NIV78_RS11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11775 NZ_CP100136.1 Protein Homology CDS 2515310 2520100 . - 0 ID=cds-WP_257756804.1;Parent=gene-NIV78_RS11775;Dbxref=Genbank:WP_257756804.1;Name=WP_257756804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876477.1;locus_tag=NIV78_RS11775;product=DUF6531 domain-containing protein;protein_id=WP_257756804.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2520176 2523310 . - . ID=gene-NIV78_RS11780;Name=NIV78_RS11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11780 NZ_CP100136.1 Protein Homology CDS 2520176 2523310 . - 0 ID=cds-WP_257756806.1;Parent=gene-NIV78_RS11780;Dbxref=Genbank:WP_257756806.1;Name=WP_257756806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876478.1;locus_tag=NIV78_RS11780;product=type VI secretion system tip protein VgrG;protein_id=WP_257756806.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2523608 2525545 . - . ID=gene-NIV78_RS11785;Name=NIV78_RS11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11785 NZ_CP100136.1 Protein Homology CDS 2523608 2525545 . - 0 ID=cds-WP_100555758.1;Parent=gene-NIV78_RS11785;Dbxref=Genbank:WP_100555758.1;Name=WP_100555758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876479.1;locus_tag=NIV78_RS11785;product=HAMP domain-containing histidine kinase;protein_id=WP_100555758.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2526020 2528032 . - . ID=gene-NIV78_RS11790;Name=NIV78_RS11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11790 NZ_CP100136.1 Protein Homology CDS 2526020 2528032 . - 0 ID=cds-WP_251107089.1;Parent=gene-NIV78_RS11790;Dbxref=Genbank:WP_251107089.1;Name=WP_251107089.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876480.1;locus_tag=NIV78_RS11790;product=VC_2705 family sodium/solute symporter;protein_id=WP_251107089.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2528029 2528463 . - . ID=gene-NIV78_RS11795;Name=NIV78_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11795 NZ_CP100136.1 Protein Homology CDS 2528029 2528463 . - 0 ID=cds-WP_015876481.1;Parent=gene-NIV78_RS11795;Dbxref=Genbank:WP_015876481.1;Name=WP_015876481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876481.1;locus_tag=NIV78_RS11795;product=DUF4212 domain-containing protein;protein_id=WP_015876481.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2528547 2530529 . - . ID=gene-NIV78_RS11800;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=NIV78_RS11800 NZ_CP100136.1 Protein Homology CDS 2528547 2530529 . - 0 ID=cds-WP_017923192.1;Parent=gene-NIV78_RS11800;Dbxref=Genbank:WP_017923192.1;Name=WP_017923192.1;Ontology_term=GO:0019427,GO:0003987;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254610.1;locus_tag=NIV78_RS11800;product=acetate--CoA ligase;protein_id=WP_017923192.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2530870 2531772 . + . ID=gene-NIV78_RS11805;Name=NIV78_RS11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11805 NZ_CP100136.1 Protein Homology CDS 2530870 2531772 . + 0 ID=cds-WP_017424748.1;Parent=gene-NIV78_RS11805;Dbxref=Genbank:WP_017424748.1;Name=WP_017424748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549404.1;locus_tag=NIV78_RS11805;product=DMT family transporter;protein_id=WP_017424748.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2531879 2532469 . + . ID=gene-NIV78_RS11810;Name=NIV78_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11810 NZ_CP100136.1 Protein Homology CDS 2531879 2532469 . + 0 ID=cds-WP_015876484.1;Parent=gene-NIV78_RS11810;Dbxref=Genbank:WP_015876484.1;Name=WP_015876484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876484.1;locus_tag=NIV78_RS11810;product=TIGR00645 family protein;protein_id=WP_015876484.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2532543 2534066 . + . ID=gene-NIV78_RS11815;Name=NIV78_RS11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11815 NZ_CP100136.1 Protein Homology CDS 2532543 2534066 . + 0 ID=cds-WP_015876485.1;Parent=gene-NIV78_RS11815;Dbxref=Genbank:WP_015876485.1;Name=WP_015876485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549402.1;locus_tag=NIV78_RS11815;product=fumarate hydratase;protein_id=WP_015876485.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2534264 2534740 . + . ID=gene-NIV78_RS11820;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=NIV78_RS11820 NZ_CP100136.1 Protein Homology CDS 2534264 2534740 . + 0 ID=cds-WP_015876486.1;Parent=gene-NIV78_RS11820;Dbxref=Genbank:WP_015876486.1;Name=WP_015876486.1;Ontology_term=GO:0006880,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular sequestering of iron ion|0006880||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876486.1;locus_tag=NIV78_RS11820;product=bacterioferritin;protein_id=WP_015876486.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2534788 2535648 . + . ID=gene-NIV78_RS11825;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=NIV78_RS11825 NZ_CP100136.1 Protein Homology CDS 2534788 2535648 . + 0 ID=cds-WP_017923191.1;Parent=gene-NIV78_RS11825;Dbxref=Genbank:WP_017923191.1;Name=WP_017923191.1;Ontology_term=GO:0009252,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876487.1;locus_tag=NIV78_RS11825;product=glutamate racemase;protein_id=WP_017923191.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2535794 2536027 . + . ID=gene-NIV78_RS11830;Name=NIV78_RS11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11830 NZ_CP100136.1 Protein Homology CDS 2535794 2536027 . + 0 ID=cds-WP_015876488.1;Parent=gene-NIV78_RS11830;Dbxref=Genbank:WP_015876488.1;Name=WP_015876488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187745.1;locus_tag=NIV78_RS11830;product=(2Fe-2S)-binding protein;protein_id=WP_015876488.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2536246 2536968 . + . ID=gene-NIV78_RS11835;Name=NIV78_RS11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11835 NZ_CP100136.1 Protein Homology CDS 2536246 2536968 . + 0 ID=cds-WP_251107090.1;Parent=gene-NIV78_RS11835;Dbxref=Genbank:WP_251107090.1;Name=WP_251107090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876489.1;locus_tag=NIV78_RS11835;product=TonB family protein;protein_id=WP_251107090.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2537022 2537762 . + . ID=gene-NIV78_RS11840;Name=NIV78_RS11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11840 NZ_CP100136.1 Protein Homology CDS 2537022 2537762 . + 0 ID=cds-WP_015876490.1;Parent=gene-NIV78_RS11840;Dbxref=Genbank:WP_015876490.1;Name=WP_015876490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188455.1;locus_tag=NIV78_RS11840;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_015876490.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2537777 2538199 . + . ID=gene-NIV78_RS11845;Name=NIV78_RS11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11845 NZ_CP100136.1 Protein Homology CDS 2537777 2538199 . + 0 ID=cds-WP_015876491.1;Parent=gene-NIV78_RS11845;Dbxref=Genbank:WP_015876491.1;Name=WP_015876491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876491.1;locus_tag=NIV78_RS11845;product=biopolymer transporter ExbD;protein_id=WP_015876491.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2538548 2539531 . - . ID=gene-NIV78_RS11850;Name=NIV78_RS11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11850 NZ_CP100136.1 Protein Homology CDS 2538548 2539531 . - 0 ID=cds-WP_015876492.1;Parent=gene-NIV78_RS11850;Dbxref=Genbank:WP_015876492.1;Name=WP_015876492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090018.1;locus_tag=NIV78_RS11850;product=LysR family transcriptional regulator;protein_id=WP_015876492.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2539644 2540516 . + . ID=gene-NIV78_RS11855;Name=NIV78_RS11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11855 NZ_CP100136.1 Protein Homology CDS 2539644 2540516 . + 0 ID=cds-WP_017923700.1;Parent=gene-NIV78_RS11855;Dbxref=Genbank:WP_017923700.1;Name=WP_017923700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876493.1;locus_tag=NIV78_RS11855;product=pirin family protein;protein_id=WP_017923700.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2540601 2541086 . + . ID=gene-NIV78_RS11860;Name=NIV78_RS11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11860 NZ_CP100136.1 Protein Homology CDS 2540601 2541086 . + 0 ID=cds-WP_015876494.1;Parent=gene-NIV78_RS11860;Dbxref=Genbank:WP_015876494.1;Name=WP_015876494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011852697.1;locus_tag=NIV78_RS11860;product=SRPBCC family protein;protein_id=WP_015876494.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2541240 2541482 . + . ID=gene-NIV78_RS11865;Name=NIV78_RS11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11865 NZ_CP100136.1 Protein Homology CDS 2541240 2541482 . + 0 ID=cds-WP_015876495.1;Parent=gene-NIV78_RS11865;Dbxref=Genbank:WP_015876495.1;Name=WP_015876495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478306.1;locus_tag=NIV78_RS11865;product=hemin uptake protein HemP;protein_id=WP_015876495.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2541731 2542536 . + . ID=gene-NIV78_RS11870;Name=NIV78_RS11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11870 NZ_CP100136.1 Protein Homology CDS 2541731 2542061 . + 0 ID=cds-WP_257756808.1;Parent=gene-NIV78_RS11870;Dbxref=Genbank:WP_257756808.1;Name=WP_257756808.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611183.1;locus_tag=NIV78_RS11870;product=IS5 family transposase;protein_id=WP_257756808.1;transl_table=11 NZ_CP100136.1 Protein Homology CDS 2542061 2542536 . + 2 ID=cds-WP_257756808.1;Parent=gene-NIV78_RS11870;Dbxref=Genbank:WP_257756808.1;Name=WP_257756808.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611183.1;locus_tag=NIV78_RS11870;product=IS5 family transposase;protein_id=WP_257756808.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2542605 2544005 . - . ID=gene-NIV78_RS11875;Name=NIV78_RS11875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11875 NZ_CP100136.1 Protein Homology CDS 2542605 2544005 . - 0 ID=cds-WP_017922988.1;Parent=gene-NIV78_RS11875;Dbxref=Genbank:WP_017922988.1;Name=WP_017922988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876496.1;locus_tag=NIV78_RS11875;product=4Fe-4S binding protein;protein_id=WP_017922988.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2544002 2544844 . - . ID=gene-NIV78_RS11880;Name=NIV78_RS11880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11880 NZ_CP100136.1 Protein Homology CDS 2544002 2544844 . - 0 ID=cds-WP_017922987.1;Parent=gene-NIV78_RS11880;Dbxref=Genbank:WP_017922987.1;Name=WP_017922987.1;Ontology_term=GO:0034755,GO:0005381,GO:0016020,GO:0033573;gbkey=CDS;go_component=membrane|0016020||IEA,high-affinity iron permease complex|0033573||IEA;go_function=iron ion transmembrane transporter activity|0005381||IEA;go_process=iron ion transmembrane transport|0034755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483868.1;locus_tag=NIV78_RS11880;product=FTR1 family protein;protein_id=WP_017922987.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2544904 2545242 . - . ID=gene-NIV78_RS11885;Name=NIV78_RS11885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11885 NZ_CP100136.1 Protein Homology CDS 2544904 2545242 . - 0 ID=cds-WP_015876498.1;Parent=gene-NIV78_RS11885;Dbxref=Genbank:WP_015876498.1;Name=WP_015876498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004530725.1;locus_tag=NIV78_RS11885;product=cupredoxin domain-containing protein;protein_id=WP_015876498.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2545319 2545870 . - . ID=gene-NIV78_RS11890;Name=NIV78_RS11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11890 NZ_CP100136.1 Protein Homology CDS 2545319 2545870 . - 0 ID=cds-WP_015876499.1;Parent=gene-NIV78_RS11890;Dbxref=Genbank:WP_015876499.1;Name=WP_015876499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407929.1;locus_tag=NIV78_RS11890;product=iron transporter;protein_id=WP_015876499.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2546128 2548218 . - . ID=gene-NIV78_RS11895;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=NIV78_RS11895 NZ_CP100136.1 Protein Homology CDS 2546128 2548218 . - 0 ID=cds-WP_017424751.1;Parent=gene-NIV78_RS11895;Dbxref=Genbank:WP_017424751.1;Name=WP_017424751.1;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0005524,GO:0016787,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424751.1;locus_tag=NIV78_RS11895;product=excinuclease ABC subunit UvrB;protein_id=WP_017424751.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2548475 2549674 . + . ID=gene-NIV78_RS11900;Name=NIV78_RS11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11900 NZ_CP100136.1 Protein Homology CDS 2548475 2549674 . + 0 ID=cds-WP_015876501.1;Parent=gene-NIV78_RS11900;Dbxref=Genbank:WP_015876501.1;Name=WP_015876501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009932860.1;locus_tag=NIV78_RS11900;product=aspartate/tyrosine/aromatic aminotransferase;protein_id=WP_015876501.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2549948 2550919 . + . ID=gene-NIV78_RS11905;Name=NIV78_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11905 NZ_CP100136.1 Protein Homology CDS 2549948 2550919 . + 0 ID=cds-WP_015876502.1;Parent=gene-NIV78_RS11905;Dbxref=Genbank:WP_015876502.1;Name=WP_015876502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004535190.1;locus_tag=NIV78_RS11905;product=aldo/keto reductase;protein_id=WP_015876502.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2551032 2551877 . + . ID=gene-NIV78_RS11910;Name=rlmJ;gbkey=Gene;gene=rlmJ;gene_biotype=protein_coding;locus_tag=NIV78_RS11910 NZ_CP100136.1 Protein Homology CDS 2551032 2551877 . + 0 ID=cds-WP_017922986.1;Parent=gene-NIV78_RS11910;Dbxref=Genbank:WP_017922986.1;Name=WP_017922986.1;Ontology_term=GO:0070475,GO:0008649;gbkey=CDS;gene=rlmJ;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425060.1;locus_tag=NIV78_RS11910;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_017922986.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2551921 2552232 . - . ID=gene-NIV78_RS11915;Name=NIV78_RS11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11915 NZ_CP100136.1 Protein Homology CDS 2551921 2552232 . - 0 ID=cds-WP_241766817.1;Parent=gene-NIV78_RS11915;Dbxref=Genbank:WP_241766817.1;Name=WP_241766817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006053110.1;locus_tag=NIV78_RS11915;product=hypothetical protein;protein_id=WP_241766817.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2552389 2552535 . - . ID=gene-NIV78_RS11920;Name=NIV78_RS11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11920 NZ_CP100136.1 Protein Homology CDS 2552389 2552535 . - 0 ID=cds-WP_015876505.1;Parent=gene-NIV78_RS11920;Dbxref=Genbank:WP_015876505.1;Name=WP_015876505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763866.1;locus_tag=NIV78_RS11920;product=DUF3563 family protein;protein_id=WP_015876505.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2552766 2553155 . - . ID=gene-NIV78_RS11925;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=NIV78_RS11925 NZ_CP100136.1 Protein Homology CDS 2552766 2553155 . - 0 ID=cds-WP_015876506.1;Parent=gene-NIV78_RS11925;Dbxref=Genbank:WP_015876506.1;Name=WP_015876506.1;Ontology_term=GO:0006355,GO:0006878,GO:0003700;gbkey=CDS;gene=cueR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,cellular copper ion homeostasis|0006878||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876506.1;locus_tag=NIV78_RS11925;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_015876506.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2553291 2553404 . - . ID=gene-NIV78_RS11930;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=NIV78_RS11930 NZ_CP100136.1 cmsearch rRNA 2553291 2553404 . - . ID=rna-NIV78_RS11930;Parent=gene-NIV78_RS11930;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS11930;product=5S ribosomal RNA NZ_CP100136.1 cmsearch exon 2553291 2553404 . - . ID=exon-NIV78_RS11930-1;Parent=rna-NIV78_RS11930;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS11930;product=5S ribosomal RNA NZ_CP100136.1 RefSeq gene 2553544 2556423 . - . ID=gene-NIV78_RS11935;Name=NIV78_RS11935;gbkey=Gene;gene_biotype=rRNA;locus_tag=NIV78_RS11935 NZ_CP100136.1 cmsearch rRNA 2553544 2556423 . - . ID=rna-NIV78_RS11935;Parent=gene-NIV78_RS11935;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS11935;product=23S ribosomal RNA NZ_CP100136.1 cmsearch exon 2553544 2556423 . - . ID=exon-NIV78_RS11935-1;Parent=rna-NIV78_RS11935;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS11935;product=23S ribosomal RNA NZ_CP100136.1 RefSeq gene 2556728 2556803 . - . ID=gene-NIV78_RS11940;Name=NIV78_RS11940;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS11940 NZ_CP100136.1 tRNAscan-SE tRNA 2556728 2556803 . - . ID=rna-NIV78_RS11940;Parent=gene-NIV78_RS11940;anticodon=(pos:complement(2556768..2556770));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS11940;product=tRNA-Ala NZ_CP100136.1 tRNAscan-SE exon 2556728 2556803 . - . ID=exon-NIV78_RS11940-1;Parent=rna-NIV78_RS11940;anticodon=(pos:complement(2556768..2556770));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS11940;product=tRNA-Ala NZ_CP100136.1 RefSeq gene 2556844 2556920 . - . ID=gene-NIV78_RS11945;Name=NIV78_RS11945;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS11945 NZ_CP100136.1 tRNAscan-SE tRNA 2556844 2556920 . - . ID=rna-NIV78_RS11945;Parent=gene-NIV78_RS11945;anticodon=(pos:complement(2556884..2556886));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS11945;product=tRNA-Ile NZ_CP100136.1 tRNAscan-SE exon 2556844 2556920 . - . ID=exon-NIV78_RS11945-1;Parent=rna-NIV78_RS11945;anticodon=(pos:complement(2556884..2556886));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS11945;product=tRNA-Ile NZ_CP100136.1 RefSeq gene 2556985 2558517 . - . ID=gene-NIV78_RS11950;Name=NIV78_RS11950;gbkey=Gene;gene_biotype=rRNA;locus_tag=NIV78_RS11950 NZ_CP100136.1 cmsearch rRNA 2556985 2558517 . - . ID=rna-NIV78_RS11950;Parent=gene-NIV78_RS11950;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS11950;product=16S ribosomal RNA NZ_CP100136.1 cmsearch exon 2556985 2558517 . - . ID=exon-NIV78_RS11950-1;Parent=rna-NIV78_RS11950;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS11950;product=16S ribosomal RNA NZ_CP100136.1 RefSeq gene 2559168 2560385 . + . ID=gene-NIV78_RS11955;Name=NIV78_RS11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11955 NZ_CP100136.1 Protein Homology CDS 2559168 2560385 . + 0 ID=cds-WP_015876507.1;Parent=gene-NIV78_RS11955;Dbxref=Genbank:WP_015876507.1;Name=WP_015876507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331593.1;locus_tag=NIV78_RS11955;product=DUF2863 family protein;protein_id=WP_015876507.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2560571 2561401 . + . ID=gene-NIV78_RS11960;Name=NIV78_RS11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11960 NZ_CP100136.1 Protein Homology CDS 2560571 2561401 . + 0 ID=cds-WP_017922524.1;Parent=gene-NIV78_RS11960;Dbxref=Genbank:WP_017922524.1;Name=WP_017922524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876508.1;locus_tag=NIV78_RS11960;product=response regulator transcription factor;protein_id=WP_017922524.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2561462 2562136 . + . ID=gene-NIV78_RS11965;Name=NIV78_RS11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11965 NZ_CP100136.1 Protein Homology CDS 2561462 2562136 . + 0 ID=cds-WP_015876509.1;Parent=gene-NIV78_RS11965;Dbxref=Genbank:WP_015876509.1;Name=WP_015876509.1;Ontology_term=GO:0000041,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_process=transition metal ion transport|0000041||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600792.1;locus_tag=NIV78_RS11965;product=energy-coupling factor ABC transporter permease;protein_id=WP_015876509.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2562317 2562940 . + . ID=gene-NIV78_RS11970;Name=NIV78_RS11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11970 NZ_CP100136.1 Protein Homology CDS 2562317 2562940 . + 0 ID=cds-WP_015876510.1;Parent=gene-NIV78_RS11970;Dbxref=Genbank:WP_015876510.1;Name=WP_015876510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876510.1;locus_tag=NIV78_RS11970;product=hypothetical protein;protein_id=WP_015876510.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2563072 2564223 . - . ID=gene-NIV78_RS11975;Name=NIV78_RS11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11975 NZ_CP100136.1 Protein Homology CDS 2563072 2564223 . - 0 ID=cds-WP_017423534.1;Parent=gene-NIV78_RS11975;Dbxref=Genbank:WP_017423534.1;Name=WP_017423534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213020.1;locus_tag=NIV78_RS11975;product=M14-type cytosolic carboxypeptidase;protein_id=WP_017423534.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2564344 2565126 . - . ID=gene-NIV78_RS11980;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=NIV78_RS11980 NZ_CP100136.1 Protein Homology CDS 2564344 2565126 . - 0 ID=cds-WP_017423535.1;Parent=gene-NIV78_RS11980;Dbxref=Genbank:WP_017423535.1;Name=WP_017423535.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009903880.1;locus_tag=NIV78_RS11980;product=peroxide stress protein YaaA;protein_id=WP_017423535.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2565184 2565675 . + . ID=gene-NIV78_RS11985;Name=NIV78_RS11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11985 NZ_CP100136.1 Protein Homology CDS 2565184 2565675 . + 0 ID=cds-WP_026051413.1;Parent=gene-NIV78_RS11985;Dbxref=Genbank:WP_026051413.1;Name=WP_026051413.1;Ontology_term=GO:0004521,GO:0005515;gbkey=CDS;go_function=endoribonuclease activity|0004521||IEA,protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012432405.1;locus_tag=NIV78_RS11985;product=putative toxin-antitoxin system toxin component%2C PIN family;protein_id=WP_026051413.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2565723 2566907 . + . ID=gene-NIV78_RS11990;Name=NIV78_RS11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11990 NZ_CP100136.1 Protein Homology CDS 2565723 2566907 . + 0 ID=cds-WP_017423536.1;Parent=gene-NIV78_RS11990;Dbxref=Genbank:WP_017423536.1;Name=WP_017423536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025129.1;locus_tag=NIV78_RS11990;product=methionine aminotransferase;protein_id=WP_017423536.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2566935 2567588 . - . ID=gene-NIV78_RS11995;Name=NIV78_RS11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS11995 NZ_CP100136.1 Protein Homology CDS 2566935 2567588 . - 0 ID=cds-WP_015876515.1;Parent=gene-NIV78_RS11995;Dbxref=Genbank:WP_015876515.1;Name=WP_015876515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876515.1;locus_tag=NIV78_RS11995;product=glutathione S-transferase;protein_id=WP_015876515.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2567803 2568594 . + . ID=gene-NIV78_RS12000;Name=NIV78_RS12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12000 NZ_CP100136.1 Protein Homology CDS 2567803 2568594 . + 0 ID=cds-WP_015876516.1;Parent=gene-NIV78_RS12000;Dbxref=Genbank:WP_015876516.1;Name=WP_015876516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196422.1;locus_tag=NIV78_RS12000;product=enoyl-CoA hydratase;protein_id=WP_015876516.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2568630 2569349 . + . ID=gene-NIV78_RS12005;Name=NIV78_RS12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12005 NZ_CP100136.1 Protein Homology CDS 2568630 2569349 . + 0 ID=cds-WP_015876517.1;Parent=gene-NIV78_RS12005;Dbxref=Genbank:WP_015876517.1;Name=WP_015876517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876517.1;locus_tag=NIV78_RS12005;product=histidine phosphatase family protein;protein_id=WP_015876517.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2569377 2570486 . + . ID=gene-NIV78_RS12010;Name=NIV78_RS12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12010 NZ_CP100136.1 Protein Homology CDS 2569377 2570486 . + 0 ID=cds-WP_015876518.1;Parent=gene-NIV78_RS12010;Dbxref=Genbank:WP_015876518.1;Name=WP_015876518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876518.1;locus_tag=NIV78_RS12010;product=phosphotransferase;protein_id=WP_015876518.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2570541 2571776 . + . ID=gene-NIV78_RS12015;Name=NIV78_RS12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12015 NZ_CP100136.1 Protein Homology CDS 2570541 2571776 . + 0 ID=cds-WP_015876519.1;Parent=gene-NIV78_RS12015;Dbxref=Genbank:WP_015876519.1;Name=WP_015876519.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876519.1;locus_tag=NIV78_RS12015;product=acyl-CoA dehydrogenase family protein;protein_id=WP_015876519.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2571848 2572342 . - . ID=gene-NIV78_RS12020;Name=NIV78_RS12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12020 NZ_CP100136.1 Protein Homology CDS 2571848 2572342 . - 0 ID=cds-WP_015876520.1;Parent=gene-NIV78_RS12020;Dbxref=Genbank:WP_015876520.1;Name=WP_015876520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876520.1;locus_tag=NIV78_RS12020;product=MaoC family dehydratase;protein_id=WP_015876520.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2572339 2572797 . - . ID=gene-NIV78_RS12025;Name=NIV78_RS12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12025 NZ_CP100136.1 Protein Homology CDS 2572339 2572797 . - 0 ID=cds-WP_015876521.1;Parent=gene-NIV78_RS12025;Dbxref=Genbank:WP_015876521.1;Name=WP_015876521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526466.1;locus_tag=NIV78_RS12025;product=MaoC family dehydratase;protein_id=WP_015876521.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2572845 2573978 . - . ID=gene-NIV78_RS12030;Name=NIV78_RS12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12030 NZ_CP100136.1 Protein Homology CDS 2572845 2573978 . - 0 ID=cds-WP_015876522.1;Parent=gene-NIV78_RS12030;Dbxref=Genbank:WP_015876522.1;Name=WP_015876522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876522.1;locus_tag=NIV78_RS12030;product=acyl-CoA dehydrogenase;protein_id=WP_015876522.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2573989 2575185 . - . ID=gene-NIV78_RS12035;Name=NIV78_RS12035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12035 NZ_CP100136.1 Protein Homology CDS 2573989 2575185 . - 0 ID=cds-WP_251107092.1;Parent=gene-NIV78_RS12035;Dbxref=Genbank:WP_251107092.1;Name=WP_251107092.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763850.1;locus_tag=NIV78_RS12035;product=acyl-CoA dehydrogenase family protein;protein_id=WP_251107092.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2575251 2575685 . - . ID=gene-NIV78_RS12040;Name=NIV78_RS12040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12040 NZ_CP100136.1 Protein Homology CDS 2575251 2575685 . - 0 ID=cds-WP_015876524.1;Parent=gene-NIV78_RS12040;Dbxref=Genbank:WP_015876524.1;Name=WP_015876524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185972.1;locus_tag=NIV78_RS12040;product=DUF1178 family protein;protein_id=WP_015876524.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2575885 2576475 . - . ID=gene-NIV78_RS12045;Name=NIV78_RS12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12045 NZ_CP100136.1 Protein Homology CDS 2575885 2576475 . - 0 ID=cds-WP_257756815.1;Parent=gene-NIV78_RS12045;Dbxref=Genbank:WP_257756815.1;Name=WP_257756815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876525.1;locus_tag=NIV78_RS12045;product=NUDIX hydrolase;protein_id=WP_257756815.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2576512 2576811 . - . ID=gene-NIV78_RS12050;Name=NIV78_RS12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12050 NZ_CP100136.1 Protein Homology CDS 2576512 2576811 . - 0 ID=cds-WP_015876526.1;Parent=gene-NIV78_RS12050;Dbxref=Genbank:WP_015876526.1;Name=WP_015876526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601582.1;locus_tag=NIV78_RS12050;product=DUF2818 family protein;protein_id=WP_015876526.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2576811 2578268 . - . ID=gene-NIV78_RS12055;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=NIV78_RS12055 NZ_CP100136.1 Protein Homology CDS 2576811 2578268 . - 0 ID=cds-WP_015876527.1;Parent=gene-NIV78_RS12055;Dbxref=Genbank:WP_015876527.1;Name=WP_015876527.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186468.1;locus_tag=NIV78_RS12055;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_015876527.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2578308 2579801 . - . ID=gene-NIV78_RS12060;Name=NIV78_RS12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12060 NZ_CP100136.1 Protein Homology CDS 2578308 2579801 . - 0 ID=cds-WP_015876528.1;Parent=gene-NIV78_RS12060;Dbxref=Genbank:WP_015876528.1;Name=WP_015876528.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007175605.1;locus_tag=NIV78_RS12060;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_015876528.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2579822 2581867 . - . ID=gene-NIV78_RS12065;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=NIV78_RS12065 NZ_CP100136.1 Protein Homology CDS 2579822 2581867 . - 0 ID=cds-WP_015876529.1;Parent=gene-NIV78_RS12065;Dbxref=Genbank:WP_015876529.1;Name=WP_015876529.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185765.1;locus_tag=NIV78_RS12065;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_015876529.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2581885 2582196 . - . ID=gene-NIV78_RS12070;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=NIV78_RS12070 NZ_CP100136.1 Protein Homology CDS 2581885 2582196 . - 0 ID=cds-WP_013698856.1;Parent=gene-NIV78_RS12070;Dbxref=Genbank:WP_013698856.1;Name=WP_013698856.1;gbkey=CDS;gene=nuoK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004630788.1;locus_tag=NIV78_RS12070;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_013698856.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2582214 2582876 . - . ID=gene-NIV78_RS12075;Name=NIV78_RS12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12075 NZ_CP100136.1 Protein Homology CDS 2582214 2582876 . - 0 ID=cds-WP_015876530.1;Parent=gene-NIV78_RS12075;Dbxref=Genbank:WP_015876530.1;Name=WP_015876530.1;Ontology_term=GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892164.1;locus_tag=NIV78_RS12075;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_015876530.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2582991 2583479 . - . ID=gene-NIV78_RS12080;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=NIV78_RS12080 NZ_CP100136.1 Protein Homology CDS 2582991 2583479 . - 0 ID=cds-WP_257756817.1;Parent=gene-NIV78_RS12080;Dbxref=Genbank:WP_257756817.1;Name=WP_257756817.1;Ontology_term=GO:0016651,GO:0051539;gbkey=CDS;gene=nuoI;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885529.1;locus_tag=NIV78_RS12080;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_257756817.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2583496 2584560 . - . ID=gene-NIV78_RS12085;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=NIV78_RS12085 NZ_CP100136.1 Protein Homology CDS 2583496 2584560 . - 0 ID=cds-WP_015876532.1;Parent=gene-NIV78_RS12085;Dbxref=Genbank:WP_015876532.1;Name=WP_015876532.1;Ontology_term=GO:0016020;gbkey=CDS;gene=nuoH;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698859.1;locus_tag=NIV78_RS12085;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_015876532.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2584561 2586891 . - . ID=gene-NIV78_RS12090;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=NIV78_RS12090 NZ_CP100136.1 Protein Homology CDS 2584561 2586891 . - 0 ID=cds-WP_251107093.1;Parent=gene-NIV78_RS12090;Dbxref=Genbank:WP_251107093.1;Name=WP_251107093.1;Ontology_term=GO:0006120,GO:0050136;gbkey=CDS;gene=nuoG;go_function=NADH dehydrogenase (quinone) activity|0050136||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213012.1;locus_tag=NIV78_RS12090;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_251107093.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2586992 2588308 . - . ID=gene-NIV78_RS12095;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=NIV78_RS12095 NZ_CP100136.1 Protein Homology CDS 2586992 2588308 . - 0 ID=cds-WP_015876534.1;Parent=gene-NIV78_RS12095;Dbxref=Genbank:WP_015876534.1;Name=WP_015876534.1;Ontology_term=GO:0050136;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (quinone) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423544.1;locus_tag=NIV78_RS12095;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_015876534.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2588305 2588790 . - . ID=gene-NIV78_RS12100;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=NIV78_RS12100 NZ_CP100136.1 Protein Homology CDS 2588305 2588790 . - 0 ID=cds-WP_015876535.1;Parent=gene-NIV78_RS12100;Dbxref=Genbank:WP_015876535.1;Name=WP_015876535.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012401393.1;locus_tag=NIV78_RS12100;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_015876535.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2588910 2590163 . - . ID=gene-NIV78_RS12105;Name=NIV78_RS12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12105 NZ_CP100136.1 Protein Homology CDS 2588910 2590163 . - 0 ID=cds-WP_015876536.1;Parent=gene-NIV78_RS12105;Dbxref=Genbank:WP_015876536.1;Name=WP_015876536.1;Ontology_term=GO:0016651,GO:0048038,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,quinone binding|0048038||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014191758.1;locus_tag=NIV78_RS12105;product=NADH-quinone oxidoreductase subunit D;protein_id=WP_015876536.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2590173 2590775 . - . ID=gene-NIV78_RS12110;Name=NIV78_RS12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12110 NZ_CP100136.1 Protein Homology CDS 2590173 2590775 . - 0 ID=cds-WP_015876537.1;Parent=gene-NIV78_RS12110;Dbxref=Genbank:WP_015876537.1;Name=WP_015876537.1;Ontology_term=GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018442918.1;locus_tag=NIV78_RS12110;product=NADH-quinone oxidoreductase subunit C;protein_id=WP_015876537.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2590795 2591274 . - . ID=gene-NIV78_RS12115;Name=NIV78_RS12115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12115 NZ_CP100136.1 Protein Homology CDS 2590795 2591274 . - 0 ID=cds-WP_015876538.1;Parent=gene-NIV78_RS12115;Dbxref=Genbank:WP_015876538.1;Name=WP_015876538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186402.1;locus_tag=NIV78_RS12115;product=NADH-quinone oxidoreductase subunit B;protein_id=WP_015876538.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2591341 2591700 . - . ID=gene-NIV78_RS12120;Name=NIV78_RS12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12120 NZ_CP100136.1 Protein Homology CDS 2591341 2591700 . - 0 ID=cds-WP_015876539.1;Parent=gene-NIV78_RS12120;Dbxref=Genbank:WP_015876539.1;Name=WP_015876539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013339872.1;locus_tag=NIV78_RS12120;product=NADH-quinone oxidoreductase subunit A;protein_id=WP_015876539.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2591857 2591941 . - . ID=gene-NIV78_RS12125;Name=NIV78_RS12125;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS12125 NZ_CP100136.1 tRNAscan-SE tRNA 2591857 2591941 . - . ID=rna-NIV78_RS12125;Parent=gene-NIV78_RS12125;anticodon=(pos:complement(2591905..2591907));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS12125;product=tRNA-Leu NZ_CP100136.1 tRNAscan-SE exon 2591857 2591941 . - . ID=exon-NIV78_RS12125-1;Parent=rna-NIV78_RS12125;anticodon=(pos:complement(2591905..2591907));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS12125;product=tRNA-Leu NZ_CP100136.1 RefSeq gene 2592052 2592402 . - . ID=gene-NIV78_RS12130;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=NIV78_RS12130 NZ_CP100136.1 Protein Homology CDS 2592052 2592402 . - 0 ID=cds-WP_257756818.1;Parent=gene-NIV78_RS12130;Dbxref=Genbank:WP_257756818.1;Name=WP_257756818.1;Ontology_term=GO:0043952,GO:0015450,GO:0005887;gbkey=CDS;gene=secG;go_component=integral component of plasma membrane|0005887||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600349.1;locus_tag=NIV78_RS12130;product=preprotein translocase subunit SecG;protein_id=WP_257756818.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2592483 2593238 . - . ID=gene-NIV78_RS12135;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=NIV78_RS12135 NZ_CP100136.1 Protein Homology CDS 2592483 2593238 . - 0 ID=cds-WP_017922563.1;Parent=gene-NIV78_RS12135;Dbxref=Genbank:WP_017922563.1;Name=WP_017922563.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657484.1;locus_tag=NIV78_RS12135;product=triose-phosphate isomerase;protein_id=WP_017922563.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2593375 2594394 . - . ID=gene-NIV78_RS12140;Name=NIV78_RS12140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12140 NZ_CP100136.1 Protein Homology CDS 2593375 2594394 . - 0 ID=cds-WP_017922564.1;Parent=gene-NIV78_RS12140;Dbxref=Genbank:WP_017922564.1;Name=WP_017922564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600129.1;locus_tag=NIV78_RS12140;product=NAD(P)H-quinone oxidoreductase;protein_id=WP_017922564.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2594503 2596632 . - . ID=gene-NIV78_RS12145;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=NIV78_RS12145 NZ_CP100136.1 Protein Homology CDS 2594503 2596632 . - 0 ID=cds-WP_015876543.1;Parent=gene-NIV78_RS12145;Dbxref=Genbank:WP_015876543.1;Name=WP_015876543.1;Ontology_term=GO:0006402,GO:0004654;gbkey=CDS;gene=pnp;go_function=polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876543.1;locus_tag=NIV78_RS12145;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_015876543.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2596948 2597217 . - . ID=gene-NIV78_RS12150;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=NIV78_RS12150 NZ_CP100136.1 Protein Homology CDS 2596948 2597217 . - 0 ID=cds-WP_013698871.1;Parent=gene-NIV78_RS12150;Dbxref=Genbank:WP_013698871.1;Name=WP_013698871.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsO;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012401401.1;locus_tag=NIV78_RS12150;product=30S ribosomal protein S15;protein_id=WP_013698871.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2597497 2597997 . + . ID=gene-NIV78_RS12155;Name=NIV78_RS12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12155 NZ_CP100136.1 Protein Homology CDS 2597497 2597997 . + 0 ID=cds-WP_017922565.1;Parent=gene-NIV78_RS12155;Dbxref=Genbank:WP_017922565.1;Name=WP_017922565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876544.1;locus_tag=NIV78_RS12155;product=hypothetical protein;protein_id=WP_017922565.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2598444 2599115 . + . ID=gene-NIV78_RS12160;Name=NIV78_RS12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12160 NZ_CP100136.1 Protein Homology CDS 2598444 2599115 . + 0 ID=cds-WP_015876545.1;Parent=gene-NIV78_RS12160;Dbxref=Genbank:WP_015876545.1;Name=WP_015876545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876545.1;locus_tag=NIV78_RS12160;product=carbonic anhydrase;protein_id=WP_015876545.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2599158 2600690 . + . ID=gene-NIV78_RS12165;Name=NIV78_RS12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12165 NZ_CP100136.1 Protein Homology CDS 2599158 2600690 . + 0 ID=cds-WP_124836991.1;Parent=gene-NIV78_RS12165;Dbxref=Genbank:WP_124836991.1;Name=WP_124836991.1;Ontology_term=GO:0008272,GO:0015116,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876546.1;locus_tag=NIV78_RS12165;product=SulP family inorganic anion transporter;protein_id=WP_124836991.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2600775 2602319 . - . ID=gene-NIV78_RS12170;Name=NIV78_RS12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12170 NZ_CP100136.1 Protein Homology CDS 2600775 2602319 . - 0 ID=cds-WP_015876547.1;Parent=gene-NIV78_RS12170;Dbxref=Genbank:WP_015876547.1;Name=WP_015876547.1;Ontology_term=GO:0003852;gbkey=CDS;go_function=2-isopropylmalate synthase activity|0003852||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398785.1;locus_tag=NIV78_RS12170;product=2-isopropylmalate synthase;protein_id=WP_015876547.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2602593 2603456 . - . ID=gene-NIV78_RS12175;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=NIV78_RS12175 NZ_CP100136.1 Protein Homology CDS 2602593 2603456 . - 0 ID=cds-WP_015876548.1;Parent=gene-NIV78_RS12175;Dbxref=Genbank:WP_015876548.1;Name=WP_015876548.1;Ontology_term=GO:0008654,GO:0003882;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-serine O-phosphatidyltransferase activity|0003882||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876548.1;locus_tag=NIV78_RS12175;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_015876548.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2603474 2604118 . - . ID=gene-NIV78_RS12180;Name=NIV78_RS12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12180 NZ_CP100136.1 Protein Homology CDS 2603474 2604118 . - 0 ID=cds-WP_017922567.1;Parent=gene-NIV78_RS12180;Dbxref=Genbank:WP_017922567.1;Name=WP_017922567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876549.1;locus_tag=NIV78_RS12180;product=phosphatidylserine decarboxylase;protein_id=WP_017922567.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2604239 2605255 . - . ID=gene-NIV78_RS12185;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=NIV78_RS12185 NZ_CP100136.1 Protein Homology CDS 2604239 2605255 . - 0 ID=cds-WP_017922568.1;Parent=gene-NIV78_RS12185;Dbxref=Genbank:WP_017922568.1;Name=WP_017922568.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011902902.1;locus_tag=NIV78_RS12185;product=ketol-acid reductoisomerase;protein_id=WP_017922568.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2605344 2605835 . - . ID=gene-NIV78_RS12190;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=NIV78_RS12190 NZ_CP100136.1 Protein Homology CDS 2605344 2605835 . - 0 ID=cds-WP_015876551.1;Parent=gene-NIV78_RS12190;Dbxref=Genbank:WP_015876551.1;Name=WP_015876551.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004630835.1;locus_tag=NIV78_RS12190;product=acetolactate synthase small subunit;protein_id=WP_015876551.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2605953 2607716 . - . ID=gene-NIV78_RS12195;Name=NIV78_RS12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12195 NZ_CP100136.1 Protein Homology CDS 2605953 2607716 . - 0 ID=cds-WP_257756822.1;Parent=gene-NIV78_RS12195;Dbxref=Genbank:WP_257756822.1;Name=WP_257756822.1;Ontology_term=GO:0009082,GO:0003984;gbkey=CDS;go_function=acetolactate synthase activity|0003984||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185769.1;locus_tag=NIV78_RS12195;product=acetolactate synthase 3 catalytic subunit;protein_id=WP_257756822.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2608052 2608615 . + . ID=gene-NIV78_RS12200;Name=NIV78_RS12200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12200 NZ_CP100136.1 Protein Homology CDS 2608052 2608615 . + 0 ID=cds-WP_015876553.1;Parent=gene-NIV78_RS12200;Dbxref=Genbank:WP_015876553.1;Name=WP_015876553.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011487480.1;locus_tag=NIV78_RS12200;product=RNA polymerase sigma factor;protein_id=WP_015876553.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2608612 2609037 . + . ID=gene-NIV78_RS12205;Name=NIV78_RS12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12205 NZ_CP100136.1 Protein Homology CDS 2608612 2609037 . + 0 ID=cds-WP_015876554.1;Parent=gene-NIV78_RS12205;Dbxref=Genbank:WP_015876554.1;Name=WP_015876554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896487.1;locus_tag=NIV78_RS12205;product=DUF3619 family protein;protein_id=WP_015876554.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2609067 2609840 . + . ID=gene-NIV78_RS12210;Name=NIV78_RS12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12210 NZ_CP100136.1 Protein Homology CDS 2609067 2609840 . + 0 ID=cds-WP_015876555.1;Parent=gene-NIV78_RS12210;Dbxref=Genbank:WP_015876555.1;Name=WP_015876555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698884.1;locus_tag=NIV78_RS12210;product=DUF3106 domain-containing protein;protein_id=WP_015876555.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2609837 2610352 . + . ID=gene-NIV78_RS12215;Name=NIV78_RS12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12215 NZ_CP100136.1 Protein Homology CDS 2609837 2610352 . + 0 ID=cds-WP_015876556.1;Parent=gene-NIV78_RS12215;Dbxref=Genbank:WP_015876556.1;Name=WP_015876556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488204.1;locus_tag=NIV78_RS12215;product=RDD family protein;protein_id=WP_015876556.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2610576 2611511 . + . ID=gene-NIV78_RS12220;Name=NIV78_RS12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12220 NZ_CP100136.1 Protein Homology CDS 2610576 2611511 . + 0 ID=cds-WP_017424086.1;Parent=gene-NIV78_RS12220;Dbxref=Genbank:WP_017424086.1;Name=WP_017424086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196438.1;locus_tag=NIV78_RS12220;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_017424086.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2611556 2612590 . + . ID=gene-NIV78_RS12225;Name=NIV78_RS12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12225 NZ_CP100136.1 Protein Homology CDS 2611556 2612590 . + 0 ID=cds-WP_015876558.1;Parent=gene-NIV78_RS12225;Dbxref=Genbank:WP_015876558.1;Name=WP_015876558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328913.1;locus_tag=NIV78_RS12225;product=glycosyltransferase family 1 protein;protein_id=WP_015876558.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2612599 2613156 . + . ID=gene-NIV78_RS12230;Name=NIV78_RS12230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12230 NZ_CP100136.1 Protein Homology CDS 2612599 2613156 . + 0 ID=cds-WP_015876559.1;Parent=gene-NIV78_RS12230;Dbxref=Genbank:WP_015876559.1;Name=WP_015876559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876559.1;locus_tag=NIV78_RS12230;product=diacylglycerol kinase;protein_id=WP_015876559.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2613381 2614094 . + . ID=gene-NIV78_RS12235;Name=NIV78_RS12235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12235 NZ_CP100136.1 Protein Homology CDS 2613381 2614094 . + 0 ID=cds-WP_257756828.1;Parent=gene-NIV78_RS12235;Dbxref=Genbank:WP_257756828.1;Name=WP_257756828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876560.1;locus_tag=NIV78_RS12235;product=TetR/AcrR family transcriptional regulator;protein_id=WP_257756828.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2614091 2614675 . + . ID=gene-NIV78_RS12240;Name=NIV78_RS12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12240 NZ_CP100136.1 Protein Homology CDS 2614091 2614675 . + 0 ID=cds-WP_017424087.1;Parent=gene-NIV78_RS12240;Dbxref=Genbank:WP_017424087.1;Name=WP_017424087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424087.1;locus_tag=NIV78_RS12240;product=TIGR00730 family Rossman fold protein;protein_id=WP_017424087.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 2614752 2615330 . + . ID=gene-NIV78_RS12245;Name=NIV78_RS12245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS12245;pseudo=true NZ_CP100136.1 Protein Homology CDS 2614752 2615330 . + 0 ID=cds-NIV78_RS12245;Parent=gene-NIV78_RS12245;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600657.1;locus_tag=NIV78_RS12245;product=SDR family oxidoreductase;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 2615687 2617552 . + . ID=gene-NIV78_RS12250;Name=NIV78_RS12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12250 NZ_CP100136.1 Protein Homology CDS 2615687 2617552 . + 0 ID=cds-WP_015876562.1;Parent=gene-NIV78_RS12250;Dbxref=Genbank:WP_015876562.1;Name=WP_015876562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424090.1;locus_tag=NIV78_RS12250;product=glycosyltransferase family 39 protein;protein_id=WP_015876562.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2617587 2618003 . - . ID=gene-NIV78_RS12255;Name=NIV78_RS12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12255 NZ_CP100136.1 Protein Homology CDS 2617587 2618003 . - 0 ID=cds-WP_015876563.1;Parent=gene-NIV78_RS12255;Dbxref=Genbank:WP_015876563.1;Name=WP_015876563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331548.1;locus_tag=NIV78_RS12255;product=group II truncated hemoglobin;protein_id=WP_015876563.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2618044 2620614 . - . ID=gene-NIV78_RS12260;Name=NIV78_RS12260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12260 NZ_CP100136.1 Protein Homology CDS 2618044 2620614 . - 0 ID=cds-WP_257756831.1;Parent=gene-NIV78_RS12260;Dbxref=Genbank:WP_257756831.1;Name=WP_257756831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876564.1;locus_tag=NIV78_RS12260;product=ABC transporter permease;protein_id=WP_257756831.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2620611 2621228 . - . ID=gene-NIV78_RS12265;Name=NIV78_RS12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12265 NZ_CP100136.1 Protein Homology CDS 2620611 2621228 . - 0 ID=cds-WP_257756833.1;Parent=gene-NIV78_RS12265;Dbxref=Genbank:WP_257756833.1;Name=WP_257756833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009980272.1;locus_tag=NIV78_RS12265;product=DUF4126 domain-containing protein;protein_id=WP_257756833.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2621423 2621743 . - . ID=gene-NIV78_RS12270;Name=NIV78_RS12270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12270 NZ_CP100136.1 Protein Homology CDS 2621423 2621743 . - 0 ID=cds-WP_015876566.1;Parent=gene-NIV78_RS12270;Dbxref=Genbank:WP_015876566.1;Name=WP_015876566.1;Ontology_term=GO:0022857,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013088907.1;locus_tag=NIV78_RS12270;product=SMR family transporter;protein_id=WP_015876566.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2621905 2622603 . - . ID=gene-NIV78_RS12275;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=NIV78_RS12275 NZ_CP100136.1 Protein Homology CDS 2621905 2622603 . - 0 ID=cds-WP_015876567.1;Parent=gene-NIV78_RS12275;Dbxref=Genbank:WP_015876567.1;Name=WP_015876567.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007583470.1;locus_tag=NIV78_RS12275;product=two-component system response regulator KdpE;protein_id=WP_015876567.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2622596 2625526 . - . ID=gene-NIV78_RS12280;Name=NIV78_RS12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12280 NZ_CP100136.1 Protein Homology CDS 2622596 2625526 . - 0 ID=cds-WP_100555812.1;Parent=gene-NIV78_RS12280;Dbxref=Genbank:WP_100555812.1;Name=WP_100555812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876568.1;locus_tag=NIV78_RS12280;product=sensor histidine kinase KdpD;protein_id=WP_100555812.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2625651 2626232 . - . ID=gene-NIV78_RS12285;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=NIV78_RS12285 NZ_CP100136.1 Protein Homology CDS 2625651 2626232 . - 0 ID=cds-WP_257756835.1;Parent=gene-NIV78_RS12285;Dbxref=Genbank:WP_257756835.1;Name=WP_257756835.1;Ontology_term=GO:0006813,GO:0008556,GO:0016021;gbkey=CDS;gene=kdpC;go_component=integral component of membrane|0016021||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010102455.1;locus_tag=NIV78_RS12285;product=potassium-transporting ATPase subunit KdpC;protein_id=WP_257756835.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2626246 2628330 . - . ID=gene-NIV78_RS12290;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=NIV78_RS12290 NZ_CP100136.1 Protein Homology CDS 2626246 2628330 . - 0 ID=cds-WP_015876570.1;Parent=gene-NIV78_RS12290;Dbxref=Genbank:WP_015876570.1;Name=WP_015876570.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpB;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203522.1;locus_tag=NIV78_RS12290;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_015876570.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2628429 2630237 . - . ID=gene-NIV78_RS12295;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=NIV78_RS12295 NZ_CP100136.1 Protein Homology CDS 2628429 2630237 . - 0 ID=cds-WP_015876571.1;Parent=gene-NIV78_RS12295;Dbxref=Genbank:WP_015876571.1;Name=WP_015876571.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009964885.1;locus_tag=NIV78_RS12295;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_015876571.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2630234 2630326 . - . ID=gene-NIV78_RS12300;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=NIV78_RS12300 NZ_CP100136.1 Protein Homology CDS 2630234 2630326 . - 0 ID=cds-WP_035981539.1;Parent=gene-NIV78_RS12300;Dbxref=Genbank:WP_035981539.1;Name=WP_035981539.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpF;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331558.1;locus_tag=NIV78_RS12300;product=K(+)-transporting ATPase subunit F;protein_id=WP_035981539.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2630602 2631576 . - . ID=gene-NIV78_RS12305;Name=NIV78_RS12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12305 NZ_CP100136.1 Protein Homology CDS 2630602 2631576 . - 0 ID=cds-WP_015876573.1;Parent=gene-NIV78_RS12305;Dbxref=Genbank:WP_015876573.1;Name=WP_015876573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405597.1;locus_tag=NIV78_RS12305;product=quinone oxidoreductase;protein_id=WP_015876573.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2631836 2632237 . + . ID=gene-NIV78_RS12310;Name=NIV78_RS12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12310 NZ_CP100136.1 Protein Homology CDS 2631836 2632237 . + 0 ID=cds-WP_015876574.1;Parent=gene-NIV78_RS12310;Dbxref=Genbank:WP_015876574.1;Name=WP_015876574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876574.1;locus_tag=NIV78_RS12310;product=hypothetical protein;protein_id=WP_015876574.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2632278 2632661 . - . ID=gene-NIV78_RS12315;Name=NIV78_RS12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12315 NZ_CP100136.1 Protein Homology CDS 2632278 2632661 . - 0 ID=cds-WP_015876575.1;Parent=gene-NIV78_RS12315;Dbxref=Genbank:WP_015876575.1;Name=WP_015876575.1;Ontology_term=GO:0019242,GO:0008929;gbkey=CDS;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876575.1;locus_tag=NIV78_RS12315;product=methylglyoxal synthase;protein_id=WP_015876575.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2632791 2633570 . - . ID=gene-NIV78_RS12320;Name=NIV78_RS12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12320 NZ_CP100136.1 Protein Homology CDS 2632791 2633570 . - 0 ID=cds-WP_017923052.1;Parent=gene-NIV78_RS12320;Dbxref=Genbank:WP_017923052.1;Name=WP_017923052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876576.1;locus_tag=NIV78_RS12320;product=SDR family oxidoreductase;protein_id=WP_017923052.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2633794 2634444 . + . ID=gene-NIV78_RS12325;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=NIV78_RS12325 NZ_CP100136.1 Protein Homology CDS 2633794 2634444 . + 0 ID=cds-WP_017425517.1;Parent=gene-NIV78_RS12325;Dbxref=Genbank:WP_017425517.1;Name=WP_017425517.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091140.1;locus_tag=NIV78_RS12325;product=uracil phosphoribosyltransferase;protein_id=WP_017425517.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2634728 2635456 . + . ID=gene-NIV78_RS12330;Name=NIV78_RS12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12330 NZ_CP100136.1 Protein Homology CDS 2634728 2635456 . + 0 ID=cds-WP_015876578.1;Parent=gene-NIV78_RS12330;Dbxref=Genbank:WP_015876578.1;Name=WP_015876578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091139.1;locus_tag=NIV78_RS12330;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_015876578.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2635564 2636841 . + . ID=gene-NIV78_RS12335;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=NIV78_RS12335 NZ_CP100136.1 Protein Homology CDS 2635564 2636841 . + 0 ID=cds-WP_015876579.1;Parent=gene-NIV78_RS12335;Dbxref=Genbank:WP_015876579.1;Name=WP_015876579.1;Ontology_term=GO:0006189,GO:0009152,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876579.1;locus_tag=NIV78_RS12335;product=phosphoribosylamine--glycine ligase;protein_id=WP_015876579.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2637005 2637928 . + . ID=gene-NIV78_RS12340;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=NIV78_RS12340 NZ_CP100136.1 Protein Homology CDS 2637005 2637928 . + 0 ID=cds-WP_015876580.1;Parent=gene-NIV78_RS12340;Dbxref=Genbank:WP_015876580.1;Name=WP_015876580.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423512.1;locus_tag=NIV78_RS12340;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_015876580.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2637919 2638680 . + . ID=gene-NIV78_RS12345;Name=NIV78_RS12345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12345 NZ_CP100136.1 Protein Homology CDS 2637919 2638680 . + 0 ID=cds-WP_015876581.1;Parent=gene-NIV78_RS12345;Dbxref=Genbank:WP_015876581.1;Name=WP_015876581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876581.1;locus_tag=NIV78_RS12345;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_015876581.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2638682 2639122 . + . ID=gene-NIV78_RS12350;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=NIV78_RS12350 NZ_CP100136.1 Protein Homology CDS 2638682 2639122 . + 0 ID=cds-WP_015876582.1;Parent=gene-NIV78_RS12350;Dbxref=Genbank:WP_015876582.1;Name=WP_015876582.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398740.1;locus_tag=NIV78_RS12350;product=ribosome silencing factor;protein_id=WP_015876582.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2639170 2639640 . + . ID=gene-NIV78_RS12355;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=NIV78_RS12355 NZ_CP100136.1 Protein Homology CDS 2639170 2639640 . + 0 ID=cds-WP_017423510.1;Parent=gene-NIV78_RS12355;Dbxref=Genbank:WP_017423510.1;Name=WP_017423510.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352746.1;locus_tag=NIV78_RS12355;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_017423510.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2639681 2640322 . + . ID=gene-NIV78_RS12360;Name=NIV78_RS12360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12360 NZ_CP100136.1 Protein Homology CDS 2639681 2640322 . + 0 ID=cds-WP_015876584.1;Parent=gene-NIV78_RS12360;Dbxref=Genbank:WP_015876584.1;Name=WP_015876584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698915.1;locus_tag=NIV78_RS12360;product=Maf-like protein;protein_id=WP_015876584.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2640330 2641799 . + . ID=gene-NIV78_RS12365;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=NIV78_RS12365 NZ_CP100136.1 Protein Homology CDS 2640330 2641799 . + 0 ID=cds-WP_015876585.1;Parent=gene-NIV78_RS12365;Dbxref=Genbank:WP_015876585.1;Name=WP_015876585.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,ribonuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545847.1;locus_tag=NIV78_RS12365;product=ribonuclease G;protein_id=WP_015876585.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2641883 2643106 . - . ID=gene-NIV78_RS12370;Name=NIV78_RS12370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12370 NZ_CP100136.1 Protein Homology CDS 2641883 2643106 . - 0 ID=cds-WP_241766814.1;Parent=gene-NIV78_RS12370;Dbxref=Genbank:WP_241766814.1;Name=WP_241766814.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019034.2;locus_tag=NIV78_RS12370;product=alpha-2%2C8-polysialyltransferase family protein;protein_id=WP_241766814.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2643153 2643494 . - . ID=gene-NIV78_RS12375;Name=NIV78_RS12375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12375 NZ_CP100136.1 GeneMarkS-2+ CDS 2643153 2643494 . - 0 ID=cds-WP_017922920.1;Parent=gene-NIV78_RS12375;Dbxref=Genbank:WP_017922920.1;Name=WP_017922920.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS12375;product=hypothetical protein;protein_id=WP_017922920.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2644170 2645321 . + . ID=gene-NIV78_RS12380;Name=glf;gbkey=Gene;gene=glf;gene_biotype=protein_coding;locus_tag=NIV78_RS12380 NZ_CP100136.1 Protein Homology CDS 2644170 2645321 . + 0 ID=cds-WP_043225405.1;Parent=gene-NIV78_RS12380;Dbxref=Genbank:WP_043225405.1;Name=WP_043225405.1;Ontology_term=GO:0009273,GO:0008767;gbkey=CDS;gene=glf;go_function=UDP-galactopyranose mutase activity|0008767||IEA;go_process=peptidoglycan-based cell wall biogenesis|0009273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400952.1;locus_tag=NIV78_RS12380;product=UDP-galactopyranose mutase;protein_id=WP_043225405.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2645318 2646175 . + . ID=gene-NIV78_RS12385;Name=NIV78_RS12385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12385 NZ_CP100136.1 Protein Homology CDS 2645318 2646175 . + 0 ID=cds-WP_017922918.1;Parent=gene-NIV78_RS12385;Dbxref=Genbank:WP_017922918.1;Name=WP_017922918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423506.1;locus_tag=NIV78_RS12385;product=glycosyltransferase;protein_id=WP_017922918.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2646553 2647344 . + . ID=gene-NIV78_RS12390;Name=NIV78_RS12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12390 NZ_CP100136.1 Protein Homology CDS 2646553 2647344 . + 0 ID=cds-WP_017423505.1;Parent=gene-NIV78_RS12390;Dbxref=Genbank:WP_017423505.1;Name=WP_017423505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423505.1;locus_tag=NIV78_RS12390;product=ABC transporter permease;protein_id=WP_017423505.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2647357 2648106 . + . ID=gene-NIV78_RS12395;Name=NIV78_RS12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12395 NZ_CP100136.1 Protein Homology CDS 2647357 2648106 . + 0 ID=cds-WP_017423504.1;Parent=gene-NIV78_RS12395;Dbxref=Genbank:WP_017423504.1;Name=WP_017423504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423504.1;locus_tag=NIV78_RS12395;product=ABC transporter ATP-binding protein;protein_id=WP_017423504.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2648348 2650201 . + . ID=gene-NIV78_RS12400;Name=NIV78_RS12400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12400 NZ_CP100136.1 Protein Homology CDS 2648348 2650201 . + 0 ID=cds-WP_198292441.1;Parent=gene-NIV78_RS12400;Dbxref=Genbank:WP_198292441.1;Name=WP_198292441.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013652.2;locus_tag=NIV78_RS12400;product=DUF4422 domain-containing protein;protein_id=WP_198292441.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2650437 2650739 . + . ID=gene-NIV78_RS12405;Name=NIV78_RS12405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12405 NZ_CP100136.1 Protein Homology CDS 2650437 2650739 . + 0 ID=cds-WP_257756842.1;Parent=gene-NIV78_RS12405;Dbxref=Genbank:WP_257756842.1;Name=WP_257756842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876586.1;locus_tag=NIV78_RS12405;product=hypothetical protein;protein_id=WP_257756842.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2651002 2651331 . + . ID=gene-NIV78_RS12410;Name=NIV78_RS12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12410 NZ_CP100136.1 Protein Homology CDS 2651002 2651331 . + 0 ID=cds-WP_015876587.1;Parent=gene-NIV78_RS12410;Dbxref=Genbank:WP_015876587.1;Name=WP_015876587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698926.1;locus_tag=NIV78_RS12410;product=cold-shock protein;protein_id=WP_015876587.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2651533 2652510 . + . ID=gene-NIV78_RS12415;Name=NIV78_RS12415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12415 NZ_CP100136.1 Protein Homology CDS 2651533 2652510 . + 0 ID=cds-WP_015876588.1;Parent=gene-NIV78_RS12415;Dbxref=Genbank:WP_015876588.1;Name=WP_015876588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698927.1;locus_tag=NIV78_RS12415;product=PRC-barrel domain-containing protein;protein_id=WP_015876588.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2652507 2653808 . + . ID=gene-NIV78_RS12420;Name=NIV78_RS12420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12420 NZ_CP100136.1 Protein Homology CDS 2652507 2653808 . + 0 ID=cds-WP_015876589.1;Parent=gene-NIV78_RS12420;Dbxref=Genbank:WP_015876589.1;Name=WP_015876589.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876589.1;locus_tag=NIV78_RS12420;product=MFS transporter;protein_id=WP_015876589.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2653820 2654395 . + . ID=gene-NIV78_RS12425;Name=NIV78_RS12425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12425 NZ_CP100136.1 Protein Homology CDS 2653820 2654395 . + 0 ID=cds-WP_257756844.1;Parent=gene-NIV78_RS12425;Dbxref=Genbank:WP_257756844.1;Name=WP_257756844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876590.1;locus_tag=NIV78_RS12425;product=FUSC family protein;protein_id=WP_257756844.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2654619 2655032 . - . ID=gene-NIV78_RS12430;Name=NIV78_RS12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12430 NZ_CP100136.1 Protein Homology CDS 2654619 2655032 . - 0 ID=cds-WP_015876591.1;Parent=gene-NIV78_RS12430;Dbxref=Genbank:WP_015876591.1;Name=WP_015876591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876591.1;locus_tag=NIV78_RS12430;product=RcnB family protein;protein_id=WP_015876591.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2655149 2656933 . - . ID=gene-NIV78_RS12435;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=NIV78_RS12435 NZ_CP100136.1 Protein Homology CDS 2655149 2656933 . - 0 ID=cds-WP_169512007.1;Parent=gene-NIV78_RS12435;Dbxref=Genbank:WP_169512007.1;Name=WP_169512007.1;Ontology_term=GO:0006869,GO:0005319;gbkey=CDS;gene=msbA;go_function=lipid transporter activity|0005319||IEA;go_process=lipid transport|0006869||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364355.1;locus_tag=NIV78_RS12435;product=lipid A export permease/ATP-binding protein MsbA;protein_id=WP_169512007.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2657135 2657899 . + . ID=gene-NIV78_RS12440;Name=NIV78_RS12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12440 NZ_CP100136.1 Protein Homology CDS 2657135 2657899 . + 0 ID=cds-WP_017424076.1;Parent=gene-NIV78_RS12440;Dbxref=Genbank:WP_017424076.1;Name=WP_017424076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424076.1;locus_tag=NIV78_RS12440;product=glycosyltransferase family 2 protein;protein_id=WP_017424076.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2658021 2658863 . + . ID=gene-NIV78_RS12445;Name=NIV78_RS12445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12445 NZ_CP100136.1 Protein Homology CDS 2658021 2658863 . + 0 ID=cds-WP_015876594.1;Parent=gene-NIV78_RS12445;Dbxref=Genbank:WP_015876594.1;Name=WP_015876594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409051.1;locus_tag=NIV78_RS12445;product=glycosyltransferase;protein_id=WP_015876594.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2659070 2660350 . + . ID=gene-NIV78_RS12450;Name=NIV78_RS12450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12450 NZ_CP100136.1 Protein Homology CDS 2659070 2660350 . + 0 ID=cds-WP_015876595.1;Parent=gene-NIV78_RS12450;Dbxref=Genbank:WP_015876595.1;Name=WP_015876595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876595.1;locus_tag=NIV78_RS12450;product=O-antigen ligase family protein;protein_id=WP_015876595.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2660432 2661616 . - . ID=gene-NIV78_RS12455;Name=NIV78_RS12455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12455 NZ_CP100136.1 Protein Homology CDS 2660432 2661616 . - 0 ID=cds-WP_015876596.1;Parent=gene-NIV78_RS12455;Dbxref=Genbank:WP_015876596.1;Name=WP_015876596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876596.1;locus_tag=NIV78_RS12455;product=glycosyltransferase family 9 protein;protein_id=WP_015876596.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2661704 2665243 . - . ID=gene-NIV78_RS12460;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=NIV78_RS12460 NZ_CP100136.1 Protein Homology CDS 2661704 2665243 . - 0 ID=cds-WP_251107096.1;Parent=gene-NIV78_RS12460;Dbxref=Genbank:WP_251107096.1;Name=WP_251107096.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212971.1;locus_tag=NIV78_RS12460;product=DNA polymerase III subunit alpha;protein_id=WP_251107096.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2665487 2666371 . + . ID=gene-NIV78_RS12465;Name=NIV78_RS12465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12465 NZ_CP100136.1 Protein Homology CDS 2665487 2666371 . + 0 ID=cds-WP_015876598.1;Parent=gene-NIV78_RS12465;Dbxref=Genbank:WP_015876598.1;Name=WP_015876598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876598.1;locus_tag=NIV78_RS12465;product=sulfurtransferase;protein_id=WP_015876598.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2666368 2667282 . + . ID=gene-NIV78_RS12470;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=NIV78_RS12470 NZ_CP100136.1 Protein Homology CDS 2666368 2667282 . + 0 ID=cds-WP_017425222.1;Parent=gene-NIV78_RS12470;Dbxref=Genbank:WP_017425222.1;Name=WP_017425222.1;Ontology_term=GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425222.1;locus_tag=NIV78_RS12470;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_017425222.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2667457 2668908 . - . ID=gene-NIV78_RS12475;Name=NIV78_RS12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12475 NZ_CP100136.1 Protein Homology CDS 2667457 2668908 . - 0 ID=cds-WP_251107097.1;Parent=gene-NIV78_RS12475;Dbxref=Genbank:WP_251107097.1;Name=WP_251107097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876600.1;locus_tag=NIV78_RS12475;product=DEAD/DEAH box helicase;protein_id=WP_251107097.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2669127 2669513 . - . ID=gene-NIV78_RS12480;Name=NIV78_RS12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12480 NZ_CP100136.1 Protein Homology CDS 2669127 2669513 . - 0 ID=cds-WP_015876601.1;Parent=gene-NIV78_RS12480;Dbxref=Genbank:WP_015876601.1;Name=WP_015876601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876601.1;locus_tag=NIV78_RS12480;product=MliC family protein;protein_id=WP_015876601.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2669607 2669768 . - . ID=gene-NIV78_RS12485;Name=NIV78_RS12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12485 NZ_CP100136.1 Protein Homology CDS 2669607 2669768 . - 0 ID=cds-WP_017424378.1;Parent=gene-NIV78_RS12485;Dbxref=Genbank:WP_017424378.1;Name=WP_017424378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876602.1;locus_tag=NIV78_RS12485;product=hypothetical protein;protein_id=WP_017424378.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2669865 2671079 . - . ID=gene-NIV78_RS12490;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=NIV78_RS12490 NZ_CP100136.1 Protein Homology CDS 2669865 2671079 . - 0 ID=cds-WP_017424379.1;Parent=gene-NIV78_RS12490;Dbxref=Genbank:WP_017424379.1;Name=WP_017424379.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698942.1;locus_tag=NIV78_RS12490;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_017424379.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2671279 2671854 . + . ID=gene-NIV78_RS12495;Name=NIV78_RS12495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12495 NZ_CP100136.1 Protein Homology CDS 2671279 2671854 . + 0 ID=cds-WP_017922982.1;Parent=gene-NIV78_RS12495;Dbxref=Genbank:WP_017922982.1;Name=WP_017922982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876604.1;locus_tag=NIV78_RS12495;product=META domain-containing protein;protein_id=WP_017922982.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2671998 2676605 . + . ID=gene-NIV78_RS12500;Name=NIV78_RS12500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12500 NZ_CP100136.1 Protein Homology CDS 2671998 2676605 . + 0 ID=cds-WP_257756852.1;Parent=gene-NIV78_RS12500;Dbxref=Genbank:WP_257756852.1;Name=WP_257756852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194767.1;locus_tag=NIV78_RS12500;product=DNA translocase FtsK 4TM domain-containing protein;protein_id=WP_257756852.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2676824 2678029 . - . ID=gene-NIV78_RS12505;Name=NIV78_RS12505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12505 NZ_CP100136.1 Protein Homology CDS 2676824 2678029 . - 0 ID=cds-WP_017424153.1;Parent=gene-NIV78_RS12505;Dbxref=Genbank:WP_017424153.1;Name=WP_017424153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876606.1;locus_tag=NIV78_RS12505;product=lactonase family protein;protein_id=WP_017424153.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2678253 2680082 . + . ID=gene-NIV78_RS12510;Name=NIV78_RS12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12510 NZ_CP100136.1 Protein Homology CDS 2678253 2680082 . + 0 ID=cds-WP_017923432.1;Parent=gene-NIV78_RS12510;Dbxref=Genbank:WP_017923432.1;Name=WP_017923432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876607.1;locus_tag=NIV78_RS12510;product=glycoside hydrolase family 15 protein;protein_id=WP_017923432.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2680342 2681859 . + . ID=gene-NIV78_RS12515;Name=phaZ;gbkey=Gene;gene=phaZ;gene_biotype=protein_coding;locus_tag=NIV78_RS12515 NZ_CP100136.1 Protein Homology CDS 2680342 2681859 . + 0 ID=cds-WP_015876608.1;Parent=gene-NIV78_RS12515;Dbxref=Genbank:WP_015876608.1;Name=WP_015876608.1;gbkey=CDS;gene=phaZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185678.1;locus_tag=NIV78_RS12515;product=polyhydroxyalkanoate depolymerase;protein_id=WP_015876608.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2682015 2682647 . - . ID=gene-NIV78_RS12520;Name=NIV78_RS12520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12520 NZ_CP100136.1 Protein Homology CDS 2682015 2682647 . - 0 ID=cds-WP_017924602.1;Parent=gene-NIV78_RS12520;Dbxref=Genbank:WP_017924602.1;Name=WP_017924602.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185974.1;locus_tag=NIV78_RS12520;product=TetR family transcriptional regulator;protein_id=WP_017924602.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2682890 2683747 . + . ID=gene-NIV78_RS12525;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=NIV78_RS12525 NZ_CP100136.1 Protein Homology CDS 2682890 2683747 . + 0 ID=cds-WP_100555823.1;Parent=gene-NIV78_RS12525;Dbxref=Genbank:WP_100555823.1;Name=WP_100555823.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876610.1;locus_tag=NIV78_RS12525;product=electron transport complex subunit RsxB;protein_id=WP_100555823.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2683744 2684388 . + . ID=gene-NIV78_RS12530;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=NIV78_RS12530 NZ_CP100136.1 Protein Homology CDS 2683744 2684388 . + 0 ID=cds-WP_015876611.1;Parent=gene-NIV78_RS12530;Dbxref=Genbank:WP_015876611.1;Name=WP_015876611.1;Ontology_term=GO:0006281,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896425.1;locus_tag=NIV78_RS12530;product=endonuclease III;protein_id=WP_015876611.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2684669 2685151 . + . ID=gene-NIV78_RS12535;Name=NIV78_RS12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12535 NZ_CP100136.1 Protein Homology CDS 2684669 2685151 . + 0 ID=cds-WP_017924283.1;Parent=gene-NIV78_RS12535;Dbxref=Genbank:WP_017924283.1;Name=WP_017924283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885614.1;locus_tag=NIV78_RS12535;product=DUF1841 family protein;protein_id=WP_017924283.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2685281 2685649 . - . ID=gene-NIV78_RS12540;Name=NIV78_RS12540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12540 NZ_CP100136.1 Protein Homology CDS 2685281 2685649 . - 0 ID=cds-WP_015876613.1;Parent=gene-NIV78_RS12540;Dbxref=Genbank:WP_015876613.1;Name=WP_015876613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876613.1;locus_tag=NIV78_RS12540;product=cytochrome c;protein_id=WP_015876613.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2685687 2686046 . - . ID=gene-NIV78_RS12545;Name=NIV78_RS12545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12545 NZ_CP100136.1 Protein Homology CDS 2685687 2686046 . - 0 ID=cds-WP_015876614.1;Parent=gene-NIV78_RS12545;Dbxref=Genbank:WP_015876614.1;Name=WP_015876614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601686.1;locus_tag=NIV78_RS12545;product=cytochrome c;protein_id=WP_015876614.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2686317 2687159 . + . ID=gene-NIV78_RS12550;Name=NIV78_RS12550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12550 NZ_CP100136.1 Protein Homology CDS 2686317 2687159 . + 0 ID=cds-WP_015876615.1;Parent=gene-NIV78_RS12550;Dbxref=Genbank:WP_015876615.1;Name=WP_015876615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186676.1;locus_tag=NIV78_RS12550;product=MoxR family ATPase;protein_id=WP_015876615.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2687302 2688477 . + . ID=gene-NIV78_RS12555;Name=NIV78_RS12555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12555 NZ_CP100136.1 Protein Homology CDS 2687302 2688477 . + 0 ID=cds-WP_015876616.1;Parent=gene-NIV78_RS12555;Dbxref=Genbank:WP_015876616.1;Name=WP_015876616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186167.1;locus_tag=NIV78_RS12555;product=VWA domain-containing protein;protein_id=WP_015876616.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2688636 2689847 . + . ID=gene-NIV78_RS12560;Name=NIV78_RS12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12560 NZ_CP100136.1 Protein Homology CDS 2688636 2689847 . + 0 ID=cds-WP_015876618.1;Parent=gene-NIV78_RS12560;Dbxref=Genbank:WP_015876618.1;Name=WP_015876618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876618.1;locus_tag=NIV78_RS12560;product=benzoate/H(+) symporter BenE family transporter;protein_id=WP_015876618.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2690067 2691020 . + . ID=gene-NIV78_RS12565;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=NIV78_RS12565 NZ_CP100136.1 Protein Homology CDS 2690067 2691020 . + 0 ID=cds-WP_015876619.1;Parent=gene-NIV78_RS12565;Dbxref=Genbank:WP_015876619.1;Name=WP_015876619.1;Ontology_term=GO:0006098,GO:0004801;gbkey=CDS;gene=tal;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012432264.1;locus_tag=NIV78_RS12565;product=transaldolase;protein_id=WP_015876619.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2691222 2691659 . + . ID=gene-NIV78_RS12570;Name=NIV78_RS12570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12570 NZ_CP100136.1 Protein Homology CDS 2691222 2691659 . + 0 ID=cds-WP_017424908.1;Parent=gene-NIV78_RS12570;Dbxref=Genbank:WP_017424908.1;Name=WP_017424908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876620.1;locus_tag=NIV78_RS12570;product=VOC family protein;protein_id=WP_017424908.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2691805 2692734 . - . ID=gene-NIV78_RS12575;Name=NIV78_RS12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12575 NZ_CP100136.1 Protein Homology CDS 2691805 2692734 . - 0 ID=cds-WP_017924455.1;Parent=gene-NIV78_RS12575;Dbxref=Genbank:WP_017924455.1;Name=WP_017924455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024995.1;locus_tag=NIV78_RS12575;product=spermidine synthase;protein_id=WP_017924455.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2692824 2693315 . - . ID=gene-NIV78_RS12580;Name=NIV78_RS12580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12580 NZ_CP100136.1 Protein Homology CDS 2692824 2693315 . - 0 ID=cds-WP_015876622.1;Parent=gene-NIV78_RS12580;Dbxref=Genbank:WP_015876622.1;Name=WP_015876622.1;Ontology_term=GO:0006285,GO:0033958;gbkey=CDS;go_function=DNA-deoxyinosine glycosylase activity|0033958||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876622.1;locus_tag=NIV78_RS12580;product=DNA-deoxyinosine glycosylase;protein_id=WP_015876622.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2693312 2693941 . - . ID=gene-NIV78_RS12585;Name=NIV78_RS12585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12585 NZ_CP100136.1 Protein Homology CDS 2693312 2693941 . - 0 ID=cds-WP_251107547.1;Parent=gene-NIV78_RS12585;Dbxref=Genbank:WP_251107547.1;Name=WP_251107547.1;Ontology_term=GO:0006744,GO:0008813,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=chorismate lyase activity|0008813||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876623.1;locus_tag=NIV78_RS12585;product=chorismate lyase;protein_id=WP_251107547.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2693947 2695845 . - . ID=gene-NIV78_RS12590;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=NIV78_RS12590 NZ_CP100136.1 Protein Homology CDS 2693947 2695845 . - 0 ID=cds-WP_015876624.1;Parent=gene-NIV78_RS12590;Dbxref=Genbank:WP_015876624.1;Name=WP_015876624.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010102343.1;locus_tag=NIV78_RS12590;product=molecular chaperone HtpG;protein_id=WP_015876624.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2696047 2697540 . - . ID=gene-NIV78_RS12595;Name=NIV78_RS12595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12595 NZ_CP100136.1 Protein Homology CDS 2696047 2697540 . - 0 ID=cds-WP_251107099.1;Parent=gene-NIV78_RS12595;Dbxref=Genbank:WP_251107099.1;Name=WP_251107099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876625.1;locus_tag=NIV78_RS12595;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_251107099.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2697877 2698596 . + . ID=gene-NIV78_RS12600;Name=NIV78_RS12600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12600 NZ_CP100136.1 Protein Homology CDS 2697877 2698596 . + 0 ID=cds-WP_015876626.1;Parent=gene-NIV78_RS12600;Dbxref=Genbank:WP_015876626.1;Name=WP_015876626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851279.1;locus_tag=NIV78_RS12600;product=VOC family protein;protein_id=WP_015876626.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2698702 2699613 . + . ID=gene-NIV78_RS12605;Name=NIV78_RS12605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12605 NZ_CP100136.1 Protein Homology CDS 2698702 2699613 . + 0 ID=cds-WP_015876627.1;Parent=gene-NIV78_RS12605;Dbxref=Genbank:WP_015876627.1;Name=WP_015876627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876627.1;locus_tag=NIV78_RS12605;product=DMT family transporter;protein_id=WP_015876627.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2699678 2700859 . + . ID=gene-NIV78_RS12610;Name=NIV78_RS12610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12610 NZ_CP100136.1 Protein Homology CDS 2699678 2700859 . + 0 ID=cds-WP_035980910.1;Parent=gene-NIV78_RS12610;Dbxref=Genbank:WP_035980910.1;Name=WP_035980910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522482.1;locus_tag=NIV78_RS12610;product=PLP-dependent aminotransferase family protein;protein_id=WP_035980910.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2700924 2701382 . + . ID=gene-NIV78_RS12615;Name=NIV78_RS12615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12615 NZ_CP100136.1 Protein Homology CDS 2700924 2701382 . + 0 ID=cds-WP_015876629.1;Parent=gene-NIV78_RS12615;Dbxref=Genbank:WP_015876629.1;Name=WP_015876629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698971.1;locus_tag=NIV78_RS12615;product=RidA family protein;protein_id=WP_015876629.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2701379 2702263 . + . ID=gene-NIV78_RS12620;Name=NIV78_RS12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12620 NZ_CP100136.1 Protein Homology CDS 2701379 2702263 . + 0 ID=cds-WP_039202848.1;Parent=gene-NIV78_RS12620;Dbxref=Genbank:WP_039202848.1;Name=WP_039202848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424710.1;locus_tag=NIV78_RS12620;product=PhzF family phenazine biosynthesis protein;protein_id=WP_039202848.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2702818 2705187 . + . ID=gene-NIV78_RS12625;Name=NIV78_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12625 NZ_CP100136.1 Protein Homology CDS 2702818 2705187 . + 0 ID=cds-WP_015876630.1;Parent=gene-NIV78_RS12625;Dbxref=Genbank:WP_015876630.1;Name=WP_015876630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698973.1;locus_tag=NIV78_RS12625;product=EAL domain-containing protein;protein_id=WP_015876630.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2705429 2706631 . + . ID=gene-NIV78_RS12630;Name=NIV78_RS12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12630 NZ_CP100136.1 Protein Homology CDS 2705429 2706631 . + 0 ID=cds-WP_015876631.1;Parent=gene-NIV78_RS12630;Dbxref=Genbank:WP_015876631.1;Name=WP_015876631.1;Ontology_term=GO:0015703,GO:0015109;gbkey=CDS;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698974.1;locus_tag=NIV78_RS12630;product=chromate transporter;protein_id=WP_015876631.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2706717 2707175 . - . ID=gene-NIV78_RS12635;Name=NIV78_RS12635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12635 NZ_CP100136.1 Protein Homology CDS 2706717 2707175 . - 0 ID=cds-WP_015876632.1;Parent=gene-NIV78_RS12635;Dbxref=Genbank:WP_015876632.1;Name=WP_015876632.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413474.1;locus_tag=NIV78_RS12635;product=CopD family protein;protein_id=WP_015876632.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2707437 2709761 . - . ID=gene-NIV78_RS12640;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=NIV78_RS12640 NZ_CP100136.1 Protein Homology CDS 2707437 2709761 . - 0 ID=cds-WP_015876633.1;Parent=gene-NIV78_RS12640;Dbxref=Genbank:WP_015876633.1;Name=WP_015876633.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698976.1;locus_tag=NIV78_RS12640;product=DNA topoisomerase IV subunit A;protein_id=WP_015876633.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2709835 2711817 . - . ID=gene-NIV78_RS12645;Name=NIV78_RS12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12645 NZ_CP100136.1 Protein Homology CDS 2709835 2711817 . - 0 ID=cds-WP_015876634.1;Parent=gene-NIV78_RS12645;Dbxref=Genbank:WP_015876634.1;Name=WP_015876634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254672.1;locus_tag=NIV78_RS12645;product=type IIA DNA topoisomerase subunit B;protein_id=WP_015876634.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2712019 2713986 . - . ID=gene-NIV78_RS12650;Name=NIV78_RS12650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12650 NZ_CP100136.1 Protein Homology CDS 2712019 2713986 . - 0 ID=cds-WP_015876635.1;Parent=gene-NIV78_RS12650;Dbxref=Genbank:WP_015876635.1;Name=WP_015876635.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424236.1;locus_tag=NIV78_RS12650;product=ATP-binding cassette domain-containing protein;protein_id=WP_015876635.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2714192 2714602 . - . ID=gene-NIV78_RS12655;Name=NIV78_RS12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12655 NZ_CP100136.1 Protein Homology CDS 2714192 2714602 . - 0 ID=cds-WP_015876636.1;Parent=gene-NIV78_RS12655;Dbxref=Genbank:WP_015876636.1;Name=WP_015876636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876636.1;locus_tag=NIV78_RS12655;product=DUF4399 domain-containing protein;protein_id=WP_015876636.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2715815 2716423 . + . ID=gene-NIV78_RS12660;Name=NIV78_RS12660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12660 NZ_CP100136.1 GeneMarkS-2+ CDS 2715815 2716423 . + 0 ID=cds-WP_252836775.1;Parent=gene-NIV78_RS12660;Dbxref=Genbank:WP_252836775.1;Name=WP_252836775.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS12660;product=hypothetical protein;protein_id=WP_252836775.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2717328 2717810 . + . ID=gene-NIV78_RS12665;Name=NIV78_RS12665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12665 NZ_CP100136.1 Protein Homology CDS 2717328 2717810 . + 0 ID=cds-WP_186231237.1;Parent=gene-NIV78_RS12665;Dbxref=Genbank:WP_186231237.1;Name=WP_186231237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004551969.1;locus_tag=NIV78_RS12665;product=DUF2778 domain-containing protein;protein_id=WP_186231237.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2717807 2718094 . + . ID=gene-NIV78_RS12670;Name=NIV78_RS12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12670 NZ_CP100136.1 Protein Homology CDS 2717807 2718094 . + 0 ID=cds-WP_252836776.1;Parent=gene-NIV78_RS12670;Dbxref=Genbank:WP_252836776.1;Name=WP_252836776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735043.1;locus_tag=NIV78_RS12670;product=hypothetical protein;protein_id=WP_252836776.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2718134 2718919 . - . ID=gene-NIV78_RS12675;Name=NIV78_RS12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12675 NZ_CP100136.1 Protein Homology CDS 2718134 2718919 . - 0 ID=cds-WP_257756860.1;Parent=gene-NIV78_RS12675;Dbxref=Genbank:WP_257756860.1;Name=WP_257756860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890252.1;locus_tag=NIV78_RS12675;product=DNA adenine methylase;protein_id=WP_257756860.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2719080 2719703 . - . ID=gene-NIV78_RS12680;Name=NIV78_RS12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12680 NZ_CP100136.1 Protein Homology CDS 2719080 2719703 . - 0 ID=cds-WP_252836778.1;Parent=gene-NIV78_RS12680;Dbxref=Genbank:WP_252836778.1;Name=WP_252836778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697857.1;locus_tag=NIV78_RS12680;product=hypothetical protein;protein_id=WP_252836778.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2719706 2720272 . - . ID=gene-NIV78_RS12685;Name=NIV78_RS12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12685 NZ_CP100136.1 Protein Homology CDS 2719706 2720272 . - 0 ID=cds-WP_257756862.1;Parent=gene-NIV78_RS12685;Dbxref=Genbank:WP_257756862.1;Name=WP_257756862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698664.1;locus_tag=NIV78_RS12685;product=hypothetical protein;protein_id=WP_257756862.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2720269 2720718 . - . ID=gene-NIV78_RS12690;Name=NIV78_RS12690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12690 NZ_CP100136.1 GeneMarkS-2+ CDS 2720269 2720718 . - 0 ID=cds-WP_252836780.1;Parent=gene-NIV78_RS12690;Dbxref=Genbank:WP_252836780.1;Name=WP_252836780.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS12690;product=hypothetical protein;protein_id=WP_252836780.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2720791 2721840 . - . ID=gene-NIV78_RS12695;Name=NIV78_RS12695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12695 NZ_CP100136.1 Protein Homology CDS 2720791 2721840 . - 0 ID=cds-WP_252836781.1;Parent=gene-NIV78_RS12695;Dbxref=Genbank:WP_252836781.1;Name=WP_252836781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657107.1;locus_tag=NIV78_RS12695;product=contractile injection system protein%2C VgrG/Pvc8 family;protein_id=WP_252836781.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2721850 2722056 . - . ID=gene-NIV78_RS12700;Name=NIV78_RS12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12700 NZ_CP100136.1 Protein Homology CDS 2721850 2722056 . - 0 ID=cds-WP_013698666.1;Parent=gene-NIV78_RS12700;Dbxref=Genbank:WP_013698666.1;Name=WP_013698666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009964543.1;locus_tag=NIV78_RS12700;product=tail protein X;protein_id=WP_013698666.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2722031 2722909 . - . ID=gene-NIV78_RS12705;Name=NIV78_RS12705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12705 NZ_CP100136.1 Protein Homology CDS 2722031 2722909 . - 0 ID=cds-WP_257756869.1;Parent=gene-NIV78_RS12705;Dbxref=Genbank:WP_257756869.1;Name=WP_257756869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004533686.1;locus_tag=NIV78_RS12705;product=phage tail protein;protein_id=WP_257756869.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2722919 2725348 . - . ID=gene-NIV78_RS12710;Name=NIV78_RS12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12710 NZ_CP100136.1 Protein Homology CDS 2722919 2725348 . - 0 ID=cds-WP_257756870.1;Parent=gene-NIV78_RS12710;Dbxref=Genbank:WP_257756870.1;Name=WP_257756870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004547855.1;locus_tag=NIV78_RS12710;product=phage tail tape measure protein;protein_id=WP_257756870.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2725430 2725732 . - . ID=gene-NIV78_RS12715;Name=NIV78_RS12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12715 NZ_CP100136.1 Protein Homology CDS 2725430 2725732 . - 0 ID=cds-WP_015876651.1;Parent=gene-NIV78_RS12715;Dbxref=Genbank:WP_015876651.1;Name=WP_015876651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004533642.1;locus_tag=NIV78_RS12715;product=phage tail assembly protein;protein_id=WP_015876651.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2725813 2726316 . - . ID=gene-NIV78_RS12720;Name=NIV78_RS12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12720 NZ_CP100136.1 Protein Homology CDS 2725813 2726316 . - 0 ID=cds-WP_252836784.1;Parent=gene-NIV78_RS12720;Dbxref=Genbank:WP_252836784.1;Name=WP_252836784.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004552768.1;locus_tag=NIV78_RS12720;product=phage major tail tube protein;protein_id=WP_252836784.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2726326 2727495 . - . ID=gene-NIV78_RS12725;Name=NIV78_RS12725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12725 NZ_CP100136.1 Protein Homology CDS 2726326 2727495 . - 0 ID=cds-WP_257756872.1;Parent=gene-NIV78_RS12725;Dbxref=Genbank:WP_257756872.1;Name=WP_257756872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497096.1;locus_tag=NIV78_RS12725;product=phage tail sheath family protein;protein_id=WP_257756872.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2727567 2728289 . - . ID=gene-NIV78_RS12730;Name=NIV78_RS12730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12730 NZ_CP100136.1 Protein Homology CDS 2727567 2728289 . - 0 ID=cds-WP_257756873.1;Parent=gene-NIV78_RS12730;Dbxref=Genbank:WP_257756873.1;Name=WP_257756873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876654.1;locus_tag=NIV78_RS12730;product=tail fiber assembly protein;protein_id=WP_257756873.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2728303 2730315 . - . ID=gene-NIV78_RS12735;Name=NIV78_RS12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12735 NZ_CP100136.1 Protein Homology CDS 2728303 2730315 . - 0 ID=cds-WP_257756875.1;Parent=gene-NIV78_RS12735;Dbxref=Genbank:WP_257756875.1;Name=WP_257756875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876655.1;locus_tag=NIV78_RS12735;product=phage tail protein;protein_id=WP_257756875.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2730303 2730881 . - . ID=gene-NIV78_RS12740;Name=NIV78_RS12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12740 NZ_CP100136.1 Protein Homology CDS 2730303 2730881 . - 0 ID=cds-WP_252836788.1;Parent=gene-NIV78_RS12740;Dbxref=Genbank:WP_252836788.1;Name=WP_252836788.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497099.1;locus_tag=NIV78_RS12740;product=phage tail protein I;protein_id=WP_252836788.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2730871 2731767 . - . ID=gene-NIV78_RS12745;Name=NIV78_RS12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12745 NZ_CP100136.1 Protein Homology CDS 2730871 2731767 . - 0 ID=cds-WP_252836789.1;Parent=gene-NIV78_RS12745;Dbxref=Genbank:WP_252836789.1;Name=WP_252836789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876657.1;locus_tag=NIV78_RS12745;product=baseplate J/gp47 family protein;protein_id=WP_252836789.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2731764 2732096 . - . ID=gene-NIV78_RS12750;Name=NIV78_RS12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12750 NZ_CP100136.1 Protein Homology CDS 2731764 2732096 . - 0 ID=cds-WP_013698675.1;Parent=gene-NIV78_RS12750;Dbxref=Genbank:WP_013698675.1;Name=WP_013698675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004539881.1;locus_tag=NIV78_RS12750;product=GPW/gp25 family protein;protein_id=WP_013698675.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2732099 2732290 . - . ID=gene-NIV78_RS12755;Name=NIV78_RS12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12755 NZ_CP100136.1 Protein Homology CDS 2732099 2732290 . - 0 ID=cds-WP_257756877.1;Parent=gene-NIV78_RS12755;Dbxref=Genbank:WP_257756877.1;Name=WP_257756877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876659.1;locus_tag=NIV78_RS12755;product=hypothetical protein;protein_id=WP_257756877.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2732358 2733095 . - . ID=gene-NIV78_RS12760;Name=NIV78_RS12760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12760 NZ_CP100136.1 GeneMarkS-2+ CDS 2732358 2733095 . - 0 ID=cds-WP_252836791.1;Parent=gene-NIV78_RS12760;Dbxref=Genbank:WP_252836791.1;Name=WP_252836791.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS12760;product=hypothetical protein;protein_id=WP_252836791.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2733201 2733881 . - . ID=gene-NIV78_RS12765;Name=NIV78_RS12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12765 NZ_CP100136.1 Protein Homology CDS 2733201 2733881 . - 0 ID=cds-WP_015876661.1;Parent=gene-NIV78_RS12765;Dbxref=Genbank:WP_015876661.1;Name=WP_015876661.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876661.1;locus_tag=NIV78_RS12765;product=phage baseplate assembly protein V;protein_id=WP_015876661.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2733878 2734408 . - . ID=gene-NIV78_RS12770;Name=NIV78_RS12770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12770 NZ_CP100136.1 Protein Homology CDS 2733878 2734408 . - 0 ID=cds-WP_252836792.1;Parent=gene-NIV78_RS12770;Dbxref=Genbank:WP_252836792.1;Name=WP_252836792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876662.1;locus_tag=NIV78_RS12770;product=hypothetical protein;protein_id=WP_252836792.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2734398 2734928 . - . ID=gene-NIV78_RS12775;Name=NIV78_RS12775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12775 NZ_CP100136.1 Protein Homology CDS 2734398 2734928 . - 0 ID=cds-WP_257756880.1;Parent=gene-NIV78_RS12775;Dbxref=Genbank:WP_257756880.1;Name=WP_257756880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014917510.1;locus_tag=NIV78_RS12775;product=phage tail protein;protein_id=WP_257756880.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2734932 2735222 . - . ID=gene-NIV78_RS12780;Name=NIV78_RS12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12780 NZ_CP100136.1 Protein Homology CDS 2734932 2735222 . - 0 ID=cds-WP_015876664.1;Parent=gene-NIV78_RS12780;Dbxref=Genbank:WP_015876664.1;Name=WP_015876664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876664.1;locus_tag=NIV78_RS12780;product=hypothetical protein;protein_id=WP_015876664.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2735224 2736219 . - . ID=gene-NIV78_RS12785;Name=NIV78_RS12785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12785 NZ_CP100136.1 Protein Homology CDS 2735224 2736219 . - 0 ID=cds-WP_252836794.1;Parent=gene-NIV78_RS12785;Dbxref=Genbank:WP_252836794.1;Name=WP_252836794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497110.1;locus_tag=NIV78_RS12785;product=major capsid protein;protein_id=WP_252836794.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2736296 2736640 . - . ID=gene-NIV78_RS12790;Name=NIV78_RS12790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12790 NZ_CP100136.1 Protein Homology CDS 2736296 2736640 . - 0 ID=cds-WP_252836795.1;Parent=gene-NIV78_RS12790;Dbxref=Genbank:WP_252836795.1;Name=WP_252836795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411289.1;locus_tag=NIV78_RS12790;product=head decoration protein;protein_id=WP_252836795.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2736670 2737782 . - . ID=gene-NIV78_RS12795;Name=NIV78_RS12795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12795 NZ_CP100136.1 Protein Homology CDS 2736670 2737782 . - 0 ID=cds-WP_257441699.1;Parent=gene-NIV78_RS12795;Dbxref=Genbank:WP_257441699.1;Name=WP_257441699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876666.1;locus_tag=NIV78_RS12795;product=Clp protease ClpP;protein_id=WP_257441699.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2737779 2739269 . - . ID=gene-NIV78_RS12800;Name=NIV78_RS12800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12800 NZ_CP100136.1 Protein Homology CDS 2737779 2739269 . - 0 ID=cds-WP_252836797.1;Parent=gene-NIV78_RS12800;Dbxref=Genbank:WP_252836797.1;Name=WP_252836797.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698684.1;locus_tag=NIV78_RS12800;product=phage portal protein;protein_id=WP_252836797.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2739266 2739472 . - . ID=gene-NIV78_RS12805;Name=NIV78_RS12805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12805 NZ_CP100136.1 Protein Homology CDS 2739266 2739472 . - 0 ID=cds-WP_013698685.1;Parent=gene-NIV78_RS12805;Dbxref=Genbank:WP_013698685.1;Name=WP_013698685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004552757.1;locus_tag=NIV78_RS12805;product=hypothetical protein;protein_id=WP_013698685.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2739483 2741486 . - . ID=gene-NIV78_RS12810;Name=NIV78_RS12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12810 NZ_CP100136.1 Protein Homology CDS 2739483 2741486 . - 0 ID=cds-WP_252836932.1;Parent=gene-NIV78_RS12810;Dbxref=Genbank:WP_252836932.1;Name=WP_252836932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004552756.1;locus_tag=NIV78_RS12810;product=phage terminase large subunit family protein;protein_id=WP_252836932.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2741449 2742018 . - . ID=gene-NIV78_RS12815;Name=NIV78_RS12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12815 NZ_CP100136.1 Protein Homology CDS 2741449 2742018 . - 0 ID=cds-WP_252836798.1;Parent=gene-NIV78_RS12815;Dbxref=Genbank:WP_252836798.1;Name=WP_252836798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009935700.1;locus_tag=NIV78_RS12815;product=MarR family transcriptional regulator;protein_id=WP_252836798.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2742131 2742325 . - . ID=gene-NIV78_RS12820;Name=NIV78_RS12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12820 NZ_CP100136.1 Protein Homology CDS 2742131 2742325 . - 0 ID=cds-WP_013698688.1;Parent=gene-NIV78_RS12820;Dbxref=Genbank:WP_013698688.1;Name=WP_013698688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697849.1;locus_tag=NIV78_RS12820;product=hypothetical protein;protein_id=WP_013698688.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2742573 2743346 . - . ID=gene-NIV78_RS12825;Name=NIV78_RS12825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12825 NZ_CP100136.1 Protein Homology CDS 2742573 2743346 . - 0 ID=cds-WP_257756882.1;Parent=gene-NIV78_RS12825;Dbxref=Genbank:WP_257756882.1;Name=WP_257756882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409003.1;locus_tag=NIV78_RS12825;product=hypothetical protein;protein_id=WP_257756882.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2743555 2746056 . - . ID=gene-NIV78_RS12830;Name=NIV78_RS12830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12830 NZ_CP100136.1 Protein Homology CDS 2743555 2746056 . - 0 ID=cds-WP_257756883.1;Parent=gene-NIV78_RS12830;Dbxref=Genbank:WP_257756883.1;Name=WP_257756883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004533611.1;locus_tag=NIV78_RS12830;product=virulence protein E;protein_id=WP_257756883.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2746215 2746598 . - . ID=gene-NIV78_RS12835;Name=NIV78_RS12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12835 NZ_CP100136.1 Protein Homology CDS 2746215 2746598 . - 0 ID=cds-WP_257756884.1;Parent=gene-NIV78_RS12835;Dbxref=Genbank:WP_257756884.1;Name=WP_257756884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698995.1;locus_tag=NIV78_RS12835;product=hypothetical protein;protein_id=WP_257756884.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2746585 2747127 . - . ID=gene-NIV78_RS12840;Name=NIV78_RS12840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12840 NZ_CP100136.1 Protein Homology CDS 2746585 2747127 . - 0 ID=cds-WP_046579533.1;Parent=gene-NIV78_RS12840;Dbxref=Genbank:WP_046579533.1;Name=WP_046579533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698996.1;locus_tag=NIV78_RS12840;product=hypothetical protein;protein_id=WP_046579533.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2747153 2747386 . - . ID=gene-NIV78_RS12845;Name=NIV78_RS12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12845 NZ_CP100136.1 Protein Homology CDS 2747153 2747386 . - 0 ID=cds-WP_257756885.1;Parent=gene-NIV78_RS12845;Dbxref=Genbank:WP_257756885.1;Name=WP_257756885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409010.1;locus_tag=NIV78_RS12845;product=helix-turn-helix domain-containing protein;protein_id=WP_257756885.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2747471 2748013 . + . ID=gene-NIV78_RS12850;Name=NIV78_RS12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12850 NZ_CP100136.1 GeneMarkS-2+ CDS 2747471 2748013 . + 0 ID=cds-WP_257756886.1;Parent=gene-NIV78_RS12850;Dbxref=Genbank:WP_257756886.1;Name=WP_257756886.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS12850;product=hypothetical protein;protein_id=WP_257756886.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2748374 2748616 . + . ID=gene-NIV78_RS12855;Name=NIV78_RS12855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12855 NZ_CP100136.1 Protein Homology CDS 2748374 2748616 . + 0 ID=cds-WP_186014791.1;Parent=gene-NIV78_RS12855;Dbxref=Genbank:WP_186014791.1;Name=WP_186014791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698694.1;locus_tag=NIV78_RS12855;product=hypothetical protein;protein_id=WP_186014791.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2748651 2749028 . + . ID=gene-NIV78_RS12860;Name=NIV78_RS12860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12860 NZ_CP100136.1 Protein Homology CDS 2748651 2749028 . + 0 ID=cds-WP_257756889.1;Parent=gene-NIV78_RS12860;Dbxref=Genbank:WP_257756889.1;Name=WP_257756889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876674.1;locus_tag=NIV78_RS12860;product=beta-hexosaminidase;protein_id=WP_257756889.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2749028 2750404 . + . ID=gene-NIV78_RS12865;Name=NIV78_RS12865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12865 NZ_CP100136.1 Protein Homology CDS 2749028 2750404 . + 0 ID=cds-WP_257756890.1;Parent=gene-NIV78_RS12865;Dbxref=Genbank:WP_257756890.1;Name=WP_257756890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876675.1;locus_tag=NIV78_RS12865;product=pyridoxal phosphate biosynthetic protein PdxJ;protein_id=WP_257756890.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2750401 2750868 . + . ID=gene-NIV78_RS12870;Name=NIV78_RS12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12870 NZ_CP100136.1 Protein Homology CDS 2750401 2750868 . + 0 ID=cds-WP_257756892.1;Parent=gene-NIV78_RS12870;Dbxref=Genbank:WP_257756892.1;Name=WP_257756892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699001.1;locus_tag=NIV78_RS12870;product=hypothetical protein;protein_id=WP_257756892.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2750852 2751310 . + . ID=gene-NIV78_RS12875;Name=NIV78_RS12875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12875 NZ_CP100136.1 GeneMarkS-2+ CDS 2750852 2751310 . + 0 ID=cds-WP_127841020.1;Parent=gene-NIV78_RS12875;Dbxref=Genbank:WP_127841020.1;Name=WP_127841020.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS12875;product=hypothetical protein;protein_id=WP_127841020.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2751323 2751976 . + . ID=gene-NIV78_RS12880;Name=NIV78_RS12880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12880 NZ_CP100136.1 Protein Homology CDS 2751323 2751976 . + 0 ID=cds-WP_186028884.1;Parent=gene-NIV78_RS12880;Dbxref=Genbank:WP_186028884.1;Name=WP_186028884.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025303.2;locus_tag=NIV78_RS12880;product=ead/Ea22-like family protein;protein_id=WP_186028884.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2751973 2752212 . + . ID=gene-NIV78_RS12885;Name=NIV78_RS12885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12885 NZ_CP100136.1 Protein Homology CDS 2751973 2752212 . + 0 ID=cds-WP_098153724.1;Parent=gene-NIV78_RS12885;Dbxref=Genbank:WP_098153724.1;Name=WP_098153724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012432196.1;locus_tag=NIV78_RS12885;product=hypothetical protein;protein_id=WP_098153724.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2752293 2754482 . - . ID=gene-NIV78_RS12890;Name=NIV78_RS12890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12890 NZ_CP100136.1 Protein Homology CDS 2752293 2754482 . - 0 ID=cds-WP_257756895.1;Parent=gene-NIV78_RS12890;Dbxref=Genbank:WP_257756895.1;Name=WP_257756895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699004.1;locus_tag=NIV78_RS12890;product=S8 family peptidase;protein_id=WP_257756895.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2754475 2755704 . - . ID=gene-NIV78_RS12895;Name=NIV78_RS12895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12895 NZ_CP100136.1 Protein Homology CDS 2754475 2755704 . - 0 ID=cds-WP_013699005.1;Parent=gene-NIV78_RS12895;Dbxref=Genbank:WP_013699005.1;Name=WP_013699005.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011296159.1;locus_tag=NIV78_RS12895;product=AAA family ATPase;protein_id=WP_013699005.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2755799 2756956 . - . ID=gene-NIV78_RS12900;Name=NIV78_RS12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12900 NZ_CP100136.1 Protein Homology CDS 2755799 2756956 . - 0 ID=cds-WP_013699006.1;Parent=gene-NIV78_RS12900;Dbxref=Genbank:WP_013699006.1;Name=WP_013699006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409011.1;locus_tag=NIV78_RS12900;product=site-specific integrase;protein_id=WP_013699006.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2757131 2757205 . + . ID=gene-NIV78_RS12905;Name=NIV78_RS12905;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS12905 NZ_CP100136.1 tRNAscan-SE tRNA 2757131 2757205 . + . ID=rna-NIV78_RS12905;Parent=gene-NIV78_RS12905;anticodon=(pos:2757164..2757166);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS12905;product=tRNA-Arg NZ_CP100136.1 tRNAscan-SE exon 2757131 2757205 . + . ID=exon-NIV78_RS12905-1;Parent=rna-NIV78_RS12905;anticodon=(pos:2757164..2757166);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS12905;product=tRNA-Arg NZ_CP100136.1 RefSeq pseudogene 2757388 2757978 . + . ID=gene-NIV78_RS12910;Name=NIV78_RS12910;end_range=2757978,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS12910;partial=true;pseudo=true NZ_CP100136.1 Protein Homology CDS 2757388 2757978 . + 0 ID=cds-NIV78_RS12910;Parent=gene-NIV78_RS12910;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2757978,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424237.1;locus_tag=NIV78_RS12910;partial=true;product=integrase arm-type DNA-binding domain-containing protein;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 2758067 2758543 . + . ID=gene-NIV78_RS12915;Name=NIV78_RS12915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12915 NZ_CP100136.1 Protein Homology CDS 2758067 2758543 . + 0 ID=cds-WP_257756897.1;Parent=gene-NIV78_RS12915;Dbxref=Genbank:WP_257756897.1;Name=WP_257756897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734051.1;locus_tag=NIV78_RS12915;product=transposase;protein_id=WP_257756897.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2758519 2758869 . + . ID=gene-NIV78_RS12920;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=NIV78_RS12920 NZ_CP100136.1 Protein Homology CDS 2758519 2758869 . + 0 ID=cds-WP_257756898.1;Parent=gene-NIV78_RS12920;Dbxref=Genbank:WP_257756898.1;Name=WP_257756898.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: protein motif:HMM:NF017528.2;locus_tag=NIV78_RS12920;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_257756898.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2758901 2760457 . + . ID=gene-NIV78_RS12925;Name=NIV78_RS12925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12925 NZ_CP100136.1 Protein Homology CDS 2758901 2760457 . + 0 ID=cds-WP_257756899.1;Parent=gene-NIV78_RS12925;Dbxref=Genbank:WP_257756899.1;Name=WP_257756899.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875269.1;locus_tag=NIV78_RS12925;product=IS66 family transposase;protein_id=WP_257756899.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 2760485 2761099 . + . ID=gene-NIV78_RS12930;Name=NIV78_RS12930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS12930;partial=true;pseudo=true;start_range=.,2760485 NZ_CP100136.1 Protein Homology CDS 2760485 2761099 . + 0 ID=cds-NIV78_RS12930;Parent=gene-NIV78_RS12930;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424237.1;locus_tag=NIV78_RS12930;partial=true;product=site-specific integrase;pseudo=true;start_range=.,2760485;transl_table=11 NZ_CP100136.1 RefSeq gene 2761533 2762138 . - . ID=gene-NIV78_RS12935;Name=NIV78_RS12935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12935 NZ_CP100136.1 Protein Homology CDS 2761533 2762138 . - 0 ID=cds-WP_124837013.1;Parent=gene-NIV78_RS12935;Dbxref=Genbank:WP_124837013.1;Name=WP_124837013.1;Ontology_term=GO:0009058;gbkey=CDS;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488875.1;locus_tag=NIV78_RS12935;product=thioesterase domain-containing protein;protein_id=WP_124837013.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2762135 2762611 . - . ID=gene-NIV78_RS12940;Name=NIV78_RS12940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12940 NZ_CP100136.1 Protein Homology CDS 2762135 2762611 . - 0 ID=cds-WP_124837014.1;Parent=gene-NIV78_RS12940;Dbxref=Genbank:WP_124837014.1;Name=WP_124837014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876015.1;locus_tag=NIV78_RS12940;product=hypothetical protein;protein_id=WP_124837014.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2762682 2763053 . - . ID=gene-NIV78_RS12945;Name=NIV78_RS12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12945 NZ_CP100136.1 Protein Homology CDS 2762682 2763053 . - 0 ID=cds-WP_251107574.1;Parent=gene-NIV78_RS12945;Dbxref=Genbank:WP_251107574.1;Name=WP_251107574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875620.1;locus_tag=NIV78_RS12945;product=hypothetical protein;protein_id=WP_251107574.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2763057 2763581 . - . ID=gene-NIV78_RS12950;Name=NIV78_RS12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12950 NZ_CP100136.1 Protein Homology CDS 2763057 2763581 . - 0 ID=cds-WP_251107575.1;Parent=gene-NIV78_RS12950;Dbxref=Genbank:WP_251107575.1;Name=WP_251107575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020748928.1;locus_tag=NIV78_RS12950;product=hypothetical protein;protein_id=WP_251107575.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2763667 2764233 . - . ID=gene-NIV78_RS12955;Name=NIV78_RS12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12955 NZ_CP100136.1 Protein Homology CDS 2763667 2764233 . - 0 ID=cds-WP_124837751.1;Parent=gene-NIV78_RS12955;Dbxref=Genbank:WP_124837751.1;Name=WP_124837751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875617.1;locus_tag=NIV78_RS12955;product=lysozyme;protein_id=WP_124837751.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2764230 2764715 . - . ID=gene-NIV78_RS12960;Name=NIV78_RS12960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12960 NZ_CP100136.1 GeneMarkS-2+ CDS 2764230 2764715 . - 0 ID=cds-WP_017923118.1;Parent=gene-NIV78_RS12960;Dbxref=Genbank:WP_017923118.1;Name=WP_017923118.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS12960;product=hypothetical protein;protein_id=WP_017923118.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2764788 2766743 . - . ID=gene-NIV78_RS12965;Name=NIV78_RS12965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12965 NZ_CP100136.1 Protein Homology CDS 2764788 2766743 . - 0 ID=cds-WP_257756904.1;Parent=gene-NIV78_RS12965;Dbxref=Genbank:WP_257756904.1;Name=WP_257756904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875615.1;locus_tag=NIV78_RS12965;product=glycoside hydrolase family 55 protein;protein_id=WP_257756904.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2766756 2766983 . - . ID=gene-NIV78_RS12970;Name=NIV78_RS12970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12970 NZ_CP100136.1 GeneMarkS-2+ CDS 2766756 2766983 . - 0 ID=cds-WP_017922281.1;Parent=gene-NIV78_RS12970;Dbxref=Genbank:WP_017922281.1;Name=WP_017922281.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS12970;product=hypothetical protein;protein_id=WP_017922281.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2766994 2767983 . - . ID=gene-NIV78_RS12975;Name=NIV78_RS12975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12975 NZ_CP100136.1 Protein Homology CDS 2766994 2767983 . - 0 ID=cds-WP_251107503.1;Parent=gene-NIV78_RS12975;Dbxref=Genbank:WP_251107503.1;Name=WP_251107503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424273.1;locus_tag=NIV78_RS12975;product=phage tail protein;protein_id=WP_251107503.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2768002 2768643 . - . ID=gene-NIV78_RS12980;Name=NIV78_RS12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12980 NZ_CP100136.1 Protein Homology CDS 2768002 2768643 . - 0 ID=cds-WP_257756906.1;Parent=gene-NIV78_RS12980;Dbxref=Genbank:WP_257756906.1;Name=WP_257756906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011487647.1;locus_tag=NIV78_RS12980;product=DUF2313 domain-containing protein;protein_id=WP_257756906.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2768644 2769801 . - . ID=gene-NIV78_RS12985;Name=NIV78_RS12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12985 NZ_CP100136.1 Protein Homology CDS 2768644 2769801 . - 0 ID=cds-WP_257756907.1;Parent=gene-NIV78_RS12985;Dbxref=Genbank:WP_257756907.1;Name=WP_257756907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683304.1;locus_tag=NIV78_RS12985;product=baseplate J/gp47 family protein;protein_id=WP_257756907.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2769801 2770241 . - . ID=gene-NIV78_RS12990;Name=NIV78_RS12990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12990 NZ_CP100136.1 Protein Homology CDS 2769801 2770241 . - 0 ID=cds-WP_251107505.1;Parent=gene-NIV78_RS12990;Dbxref=Genbank:WP_251107505.1;Name=WP_251107505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495250.1;locus_tag=NIV78_RS12990;product=phage GP46 family protein;protein_id=WP_251107505.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2770305 2770928 . - . ID=gene-NIV78_RS12995;Name=NIV78_RS12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS12995 NZ_CP100136.1 Protein Homology CDS 2770305 2770928 . - 0 ID=cds-WP_017922276.1;Parent=gene-NIV78_RS12995;Dbxref=Genbank:WP_017922276.1;Name=WP_017922276.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: protein motif:HMM:TIGR01644.1;locus_tag=NIV78_RS12995;product=phage baseplate assembly protein V;protein_id=WP_017922276.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2770925 2772079 . - . ID=gene-NIV78_RS13000;Name=NIV78_RS13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13000 NZ_CP100136.1 GeneMarkS-2+ CDS 2770925 2772079 . - 0 ID=cds-WP_257756908.1;Parent=gene-NIV78_RS13000;Dbxref=Genbank:WP_257756908.1;Name=WP_257756908.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS13000;product=Mu P family protein;protein_id=WP_257756908.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2772076 2773506 . - . ID=gene-NIV78_RS13005;Name=NIV78_RS13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13005 NZ_CP100136.1 Protein Homology CDS 2772076 2773506 . - 0 ID=cds-WP_257756910.1;Parent=gene-NIV78_RS13005;Dbxref=Genbank:WP_257756910.1;Name=WP_257756910.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018818.2;locus_tag=NIV78_RS13005;product=DNA circularization N-terminal domain-containing protein;protein_id=WP_257756910.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2773517 2775412 . - . ID=gene-NIV78_RS13010;Name=NIV78_RS13010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13010 NZ_CP100136.1 GeneMarkS-2+ CDS 2773517 2775412 . - 0 ID=cds-WP_257756912.1;Parent=gene-NIV78_RS13010;Dbxref=Genbank:WP_257756912.1;Name=WP_257756912.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS13010;product=hypothetical protein;protein_id=WP_257756912.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2775557 2775895 . - . ID=gene-NIV78_RS13015;Name=NIV78_RS13015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13015 NZ_CP100136.1 Protein Homology CDS 2775557 2775895 . - 0 ID=cds-WP_039202781.1;Parent=gene-NIV78_RS13015;Dbxref=Genbank:WP_039202781.1;Name=WP_039202781.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021614.2;locus_tag=NIV78_RS13015;product=phage tail assembly protein;protein_id=WP_039202781.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2775906 2776277 . - . ID=gene-NIV78_RS13020;Name=NIV78_RS13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13020 NZ_CP100136.1 Protein Homology CDS 2775906 2776277 . - 0 ID=cds-WP_017922270.1;Parent=gene-NIV78_RS13020;Dbxref=Genbank:WP_017922270.1;Name=WP_017922270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004626055.1;locus_tag=NIV78_RS13020;product=phage tail tube protein;protein_id=WP_017922270.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2776341 2777825 . - . ID=gene-NIV78_RS13025;Name=NIV78_RS13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13025 NZ_CP100136.1 Protein Homology CDS 2776341 2777825 . - 0 ID=cds-WP_257744550.1;Parent=gene-NIV78_RS13025;Dbxref=Genbank:WP_257744550.1;Name=WP_257744550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012401267.1;locus_tag=NIV78_RS13025;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_257744550.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2777822 2778022 . - . ID=gene-NIV78_RS13030;Name=NIV78_RS13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13030 NZ_CP100136.1 Protein Homology CDS 2777822 2778022 . - 0 ID=cds-WP_017922268.1;Parent=gene-NIV78_RS13030;Dbxref=Genbank:WP_017922268.1;Name=WP_017922268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012401268.1;locus_tag=NIV78_RS13030;product=DUF2635 domain-containing protein;protein_id=WP_017922268.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2778032 2778595 . - . ID=gene-NIV78_RS13035;Name=NIV78_RS13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13035 NZ_CP100136.1 GeneMarkS-2+ CDS 2778032 2778595 . - 0 ID=cds-WP_155296963.1;Parent=gene-NIV78_RS13035;Dbxref=Genbank:WP_155296963.1;Name=WP_155296963.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS13035;product=ATP-binding protein;protein_id=WP_155296963.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2778595 2778915 . - . ID=gene-NIV78_RS13040;Name=NIV78_RS13040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13040 NZ_CP100136.1 GeneMarkS-2+ CDS 2778595 2778915 . - 0 ID=cds-WP_017922266.1;Parent=gene-NIV78_RS13040;Dbxref=Genbank:WP_017922266.1;Name=WP_017922266.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS13040;product=hypothetical protein;protein_id=WP_017922266.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2778917 2779180 . - . ID=gene-NIV78_RS13045;Name=NIV78_RS13045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13045 NZ_CP100136.1 GeneMarkS-2+ CDS 2778917 2779180 . - 0 ID=cds-WP_039201369.1;Parent=gene-NIV78_RS13045;Dbxref=Genbank:WP_039201369.1;Name=WP_039201369.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS13045;product=hypothetical protein;protein_id=WP_039201369.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2779180 2780247 . - . ID=gene-NIV78_RS13050;Name=NIV78_RS13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13050 NZ_CP100136.1 Protein Homology CDS 2779180 2780247 . - 0 ID=cds-WP_017922264.1;Parent=gene-NIV78_RS13050;Dbxref=Genbank:WP_017922264.1;Name=WP_017922264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495261.1;locus_tag=NIV78_RS13050;product=major capsid protein;protein_id=WP_017922264.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2780329 2781006 . - . ID=gene-NIV78_RS13055;Name=NIV78_RS13055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13055 NZ_CP100136.1 Protein Homology CDS 2780329 2781006 . - 0 ID=cds-WP_257756913.1;Parent=gene-NIV78_RS13055;Dbxref=Genbank:WP_257756913.1;Name=WP_257756913.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014921.2;locus_tag=NIV78_RS13055;product=head decoration protein;protein_id=WP_257756913.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2781046 2781663 . - . ID=gene-NIV78_RS13060;Name=NIV78_RS13060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13060 NZ_CP100136.1 GeneMarkS-2+ CDS 2781046 2781663 . - 0 ID=cds-WP_017922262.1;Parent=gene-NIV78_RS13060;Dbxref=Genbank:WP_017922262.1;Name=WP_017922262.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS13060;product=hypothetical protein;protein_id=WP_017922262.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2781682 2782572 . - . ID=gene-NIV78_RS13065;Name=NIV78_RS13065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13065 NZ_CP100136.1 Protein Homology CDS 2781682 2782572 . - 0 ID=cds-WP_017922261.1;Parent=gene-NIV78_RS13065;Dbxref=Genbank:WP_017922261.1;Name=WP_017922261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011487630.1;locus_tag=NIV78_RS13065;product=S49 family peptidase;protein_id=WP_017922261.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2782572 2784203 . - . ID=gene-NIV78_RS13070;Name=NIV78_RS13070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13070 NZ_CP100136.1 Protein Homology CDS 2782572 2784203 . - 0 ID=cds-WP_017922260.1;Parent=gene-NIV78_RS13070;Dbxref=Genbank:WP_017922260.1;Name=WP_017922260.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495265.1;locus_tag=NIV78_RS13070;product=phage portal protein;protein_id=WP_017922260.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2784203 2784451 . - . ID=gene-NIV78_RS13075;Name=NIV78_RS13075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13075 NZ_CP100136.1 Protein Homology CDS 2784203 2784451 . - 0 ID=cds-WP_017922259.1;Parent=gene-NIV78_RS13075;Dbxref=Genbank:WP_017922259.1;Name=WP_017922259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354650.1;locus_tag=NIV78_RS13075;product=phage head-tail adapter protein;protein_id=WP_017922259.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2784468 2786540 . - . ID=gene-NIV78_RS13080;Name=NIV78_RS13080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13080 NZ_CP100136.1 Protein Homology CDS 2784468 2786540 . - 0 ID=cds-WP_257756915.1;Parent=gene-NIV78_RS13080;Dbxref=Genbank:WP_257756915.1;Name=WP_257756915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012401278.1;locus_tag=NIV78_RS13080;product=phage terminase large subunit family protein;protein_id=WP_257756915.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2786593 2787297 . - . ID=gene-NIV78_RS13085;Name=NIV78_RS13085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13085 NZ_CP100136.1 GeneMarkS-2+ CDS 2786593 2787297 . - 0 ID=cds-WP_257756917.1;Parent=gene-NIV78_RS13085;Dbxref=Genbank:WP_257756917.1;Name=WP_257756917.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS13085;product=hypothetical protein;protein_id=WP_257756917.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2787347 2787592 . - . ID=gene-NIV78_RS13090;Name=NIV78_RS13090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13090 NZ_CP100136.1 GeneMarkS-2+ CDS 2787347 2787592 . - 0 ID=cds-WP_257744548.1;Parent=gene-NIV78_RS13090;Dbxref=Genbank:WP_257744548.1;Name=WP_257744548.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS13090;product=hypothetical protein;protein_id=WP_257744548.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2787579 2787941 . - . ID=gene-NIV78_RS13095;Name=NIV78_RS13095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13095 NZ_CP100136.1 Protein Homology CDS 2787579 2787941 . - 0 ID=cds-WP_257744547.1;Parent=gene-NIV78_RS13095;Dbxref=Genbank:WP_257744547.1;Name=WP_257744547.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022224.2;locus_tag=NIV78_RS13095;product=DUF2591 domain-containing protein;protein_id=WP_257744547.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2787947 2788540 . - . ID=gene-NIV78_RS13100;Name=NIV78_RS13100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13100 NZ_CP100136.1 Protein Homology CDS 2787947 2788540 . - 0 ID=cds-WP_257756919.1;Parent=gene-NIV78_RS13100;Dbxref=Genbank:WP_257756919.1;Name=WP_257756919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004626030.1;locus_tag=NIV78_RS13100;product=hypothetical protein;protein_id=WP_257756919.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2788718 2788900 . + . ID=gene-NIV78_RS13105;Name=NIV78_RS13105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13105 NZ_CP100136.1 Protein Homology CDS 2788718 2788900 . + 0 ID=cds-WP_257744545.1;Parent=gene-NIV78_RS13105;Dbxref=Genbank:WP_257744545.1;Name=WP_257744545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010928352.1;locus_tag=NIV78_RS13105;product=type II toxin-antitoxin system HicA family toxin;protein_id=WP_257744545.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2788927 2789322 . + . ID=gene-NIV78_RS13110;Name=NIV78_RS13110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13110 NZ_CP100136.1 Protein Homology CDS 2788927 2789322 . + 0 ID=cds-WP_257756920.1;Parent=gene-NIV78_RS13110;Dbxref=Genbank:WP_257756920.1;Name=WP_257756920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013518570.1;locus_tag=NIV78_RS13110;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_257756920.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2789540 2789845 . + . ID=gene-NIV78_RS13115;Name=NIV78_RS13115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13115 NZ_CP100136.1 GeneMarkS-2+ CDS 2789540 2789845 . + 0 ID=cds-WP_257756922.1;Parent=gene-NIV78_RS13115;Dbxref=Genbank:WP_257756922.1;Name=WP_257756922.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS13115;product=hypothetical protein;protein_id=WP_257756922.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2789849 2790028 . - . ID=gene-NIV78_RS13120;Name=NIV78_RS13120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13120 NZ_CP100136.1 GeneMarkS-2+ CDS 2789849 2790028 . - 0 ID=cds-WP_257756923.1;Parent=gene-NIV78_RS13120;Dbxref=Genbank:WP_257756923.1;Name=WP_257756923.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS13120;product=hypothetical protein;protein_id=WP_257756923.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2790149 2790580 . - . ID=gene-NIV78_RS13125;Name=NIV78_RS13125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13125 NZ_CP100136.1 GeneMarkS-2+ CDS 2790149 2790580 . - 0 ID=cds-WP_157384052.1;Parent=gene-NIV78_RS13125;Dbxref=Genbank:WP_157384052.1;Name=WP_157384052.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS13125;product=hypothetical protein;protein_id=WP_157384052.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2790573 2791166 . - . ID=gene-NIV78_RS13130;Name=NIV78_RS13130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13130 NZ_CP100136.1 GeneMarkS-2+ CDS 2790573 2791166 . - 0 ID=cds-WP_124837745.1;Parent=gene-NIV78_RS13130;Dbxref=Genbank:WP_124837745.1;Name=WP_124837745.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS13130;product=hypothetical protein;protein_id=WP_124837745.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2791304 2791624 . - . ID=gene-NIV78_RS13135;Name=NIV78_RS13135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13135 NZ_CP100136.1 GeneMarkS-2+ CDS 2791304 2791624 . - 0 ID=cds-WP_124837795.1;Parent=gene-NIV78_RS13135;Dbxref=Genbank:WP_124837795.1;Name=WP_124837795.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS13135;product=hypothetical protein;protein_id=WP_124837795.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2791652 2793451 . - . ID=gene-NIV78_RS13140;Name=NIV78_RS13140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13140 NZ_CP100136.1 Protein Homology CDS 2791652 2793451 . - 0 ID=cds-WP_257756925.1;Parent=gene-NIV78_RS13140;Dbxref=Genbank:WP_257756925.1;Name=WP_257756925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007746807.1;locus_tag=NIV78_RS13140;product=toprim domain-containing protein;protein_id=WP_257756925.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2793448 2793900 . - . ID=gene-NIV78_RS13145;Name=NIV78_RS13145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13145 NZ_CP100136.1 Protein Homology CDS 2793448 2793900 . - 0 ID=cds-WP_051415274.1;Parent=gene-NIV78_RS13145;Dbxref=Genbank:WP_051415274.1;Name=WP_051415274.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024784.2;locus_tag=NIV78_RS13145;product=HNH endonuclease;protein_id=WP_051415274.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2793897 2794778 . - . ID=gene-NIV78_RS13150;Name=NIV78_RS13150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13150 NZ_CP100136.1 GeneMarkS-2+ CDS 2793897 2794778 . - 0 ID=cds-WP_257756926.1;Parent=gene-NIV78_RS13150;Dbxref=Genbank:WP_257756926.1;Name=WP_257756926.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS13150;product=hypothetical protein;protein_id=WP_257756926.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2795140 2795337 . - . ID=gene-NIV78_RS13155;Name=NIV78_RS13155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13155 NZ_CP100136.1 GeneMarkS-2+ CDS 2795140 2795337 . - 0 ID=cds-WP_257756927.1;Parent=gene-NIV78_RS13155;Dbxref=Genbank:WP_257756927.1;Name=WP_257756927.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS13155;product=hypothetical protein;protein_id=WP_257756927.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2795612 2795869 . - . ID=gene-NIV78_RS13160;Name=NIV78_RS13160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13160 NZ_CP100136.1 Protein Homology CDS 2795612 2795869 . - 0 ID=cds-WP_257756928.1;Parent=gene-NIV78_RS13160;Dbxref=Genbank:WP_257756928.1;Name=WP_257756928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017776671.1;locus_tag=NIV78_RS13160;product=transcriptional regulator;protein_id=WP_257756928.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2796003 2797037 . - . ID=gene-NIV78_RS13165;Name=NIV78_RS13165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13165 NZ_CP100136.1 GeneMarkS-2+ CDS 2796003 2797037 . - 0 ID=cds-WP_257756930.1;Parent=gene-NIV78_RS13165;Dbxref=Genbank:WP_257756930.1;Name=WP_257756930.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS13165;product=hypothetical protein;protein_id=WP_257756930.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2797124 2797489 . - . ID=gene-NIV78_RS13170;Name=NIV78_RS13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13170 NZ_CP100136.1 GeneMarkS-2+ CDS 2797124 2797489 . - 0 ID=cds-WP_257756931.1;Parent=gene-NIV78_RS13170;Dbxref=Genbank:WP_257756931.1;Name=WP_257756931.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS13170;product=hypothetical protein;protein_id=WP_257756931.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2797482 2798003 . - . ID=gene-NIV78_RS13175;Name=NIV78_RS13175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13175 NZ_CP100136.1 GeneMarkS-2+ CDS 2797482 2798003 . - 0 ID=cds-WP_257756932.1;Parent=gene-NIV78_RS13175;Dbxref=Genbank:WP_257756932.1;Name=WP_257756932.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS13175;product=hypothetical protein;protein_id=WP_257756932.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2797996 2798358 . - . ID=gene-NIV78_RS13180;Name=NIV78_RS13180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13180 NZ_CP100136.1 GeneMarkS-2+ CDS 2797996 2798358 . - 0 ID=cds-WP_257756933.1;Parent=gene-NIV78_RS13180;Dbxref=Genbank:WP_257756933.1;Name=WP_257756933.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS13180;product=hypothetical protein;protein_id=WP_257756933.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2799225 2799560 . + . ID=gene-NIV78_RS13185;Name=NIV78_RS13185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13185 NZ_CP100136.1 Protein Homology CDS 2799225 2799560 . + 0 ID=cds-WP_257756934.1;Parent=gene-NIV78_RS13185;Dbxref=Genbank:WP_257756934.1;Name=WP_257756934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019717900.1;locus_tag=NIV78_RS13185;product=helix-turn-helix domain-containing protein;protein_id=WP_257756934.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2800371 2800592 . - . ID=gene-NIV78_RS13190;Name=NIV78_RS13190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13190 NZ_CP100136.1 Protein Homology CDS 2800371 2800592 . - 0 ID=cds-WP_124837758.1;Parent=gene-NIV78_RS13190;Dbxref=Genbank:WP_124837758.1;Name=WP_124837758.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025352.2;locus_tag=NIV78_RS13190;product=DUF4224 domain-containing protein;protein_id=WP_124837758.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2800608 2801084 . - . ID=gene-NIV78_RS13195;Name=NIV78_RS13195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13195 NZ_CP100136.1 Protein Homology CDS 2800608 2801084 . - 0 ID=cds-WP_257756936.1;Parent=gene-NIV78_RS13195;Dbxref=Genbank:WP_257756936.1;Name=WP_257756936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763716.1;locus_tag=NIV78_RS13195;product=AlpA family phage regulatory protein;protein_id=WP_257756936.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2801192 2801386 . - . ID=gene-NIV78_RS13200;Name=NIV78_RS13200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13200 NZ_CP100136.1 Protein Homology CDS 2801192 2801386 . - 0 ID=cds-WP_124837761.1;Parent=gene-NIV78_RS13200;Dbxref=Genbank:WP_124837761.1;Name=WP_124837761.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019540.2;locus_tag=NIV78_RS13200;product=type II toxin-antitoxin system HicA family toxin;protein_id=WP_124837761.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2801387 2801620 . - . ID=gene-NIV78_RS13205;Name=NIV78_RS13205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13205 NZ_CP100136.1 Protein Homology CDS 2801387 2801620 . - 0 ID=cds-WP_017922831.1;Parent=gene-NIV78_RS13205;Dbxref=Genbank:WP_017922831.1;Name=WP_017922831.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020542.2;locus_tag=NIV78_RS13205;product=DUF1902 domain-containing protein;protein_id=WP_017922831.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2801809 2801994 . - . ID=gene-NIV78_RS13210;Name=NIV78_RS13210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13210 NZ_CP100136.1 GeneMarkS-2+ CDS 2801809 2801994 . - 0 ID=cds-WP_124837763.1;Parent=gene-NIV78_RS13210;Dbxref=Genbank:WP_124837763.1;Name=WP_124837763.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS13210;product=hypothetical protein;protein_id=WP_124837763.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2802168 2802386 . - . ID=gene-NIV78_RS13215;Name=NIV78_RS13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13215 NZ_CP100136.1 GeneMarkS-2+ CDS 2802168 2802386 . - 0 ID=cds-WP_017922832.1;Parent=gene-NIV78_RS13215;Dbxref=Genbank:WP_017922832.1;Name=WP_017922832.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS13215;product=hypothetical protein;protein_id=WP_017922832.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2802514 2802696 . - . ID=gene-NIV78_RS13220;Name=NIV78_RS13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13220 NZ_CP100136.1 Protein Homology CDS 2802514 2802696 . - 0 ID=cds-WP_017425499.1;Parent=gene-NIV78_RS13220;Dbxref=Genbank:WP_017425499.1;Name=WP_017425499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876812.1;locus_tag=NIV78_RS13220;product=hypothetical protein;protein_id=WP_017425499.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2802831 2803607 . - . ID=gene-NIV78_RS13225;Name=NIV78_RS13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13225 NZ_CP100136.1 Protein Homology CDS 2802831 2803607 . - 0 ID=cds-WP_017922833.1;Parent=gene-NIV78_RS13225;Dbxref=Genbank:WP_017922833.1;Name=WP_017922833.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020436.2;locus_tag=NIV78_RS13225;product=DUF1828 domain-containing protein;protein_id=WP_017922833.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2803604 2804059 . - . ID=gene-NIV78_RS13230;Name=NIV78_RS13230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13230 NZ_CP100136.1 GeneMarkS-2+ CDS 2803604 2804059 . - 0 ID=cds-WP_043225285.1;Parent=gene-NIV78_RS13230;Dbxref=Genbank:WP_043225285.1;Name=WP_043225285.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS13230;product=hypothetical protein;protein_id=WP_043225285.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2804861 2805727 . - . ID=gene-NIV78_RS13235;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=NIV78_RS13235 NZ_CP100136.1 Protein Homology CDS 2804861 2805727 . - 0 ID=cds-WP_012732871.1-4;Parent=gene-NIV78_RS13235;Dbxref=Genbank:WP_012732871.1;Name=WP_012732871.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476481.1;locus_tag=NIV78_RS13235;product=IS21-like element ISBcen28 family helper ATPase IstB;protein_id=WP_012732871.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2805724 2806980 . - . ID=gene-NIV78_RS13240;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=NIV78_RS13240 NZ_CP100136.1 Protein Homology CDS 2805724 2806980 . - 0 ID=cds-WP_012734039.1-4;Parent=gene-NIV78_RS13240;Dbxref=Genbank:WP_012734039.1;Name=WP_012734039.1;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476480.1;locus_tag=NIV78_RS13240;product=IS21 family transposase;protein_id=WP_012734039.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 2807106 2807464 . + . ID=gene-NIV78_RS13245;Name=NIV78_RS13245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS13245;partial=true;pseudo=true;start_range=.,2807106 NZ_CP100136.1 Protein Homology CDS 2807106 2807464 . + 0 ID=cds-NIV78_RS13245;Parent=gene-NIV78_RS13245;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009911653.1;locus_tag=NIV78_RS13245;partial=true;product=integrase;pseudo=true;start_range=.,2807106;transl_table=11 NZ_CP100136.1 RefSeq gene 2807974 2808813 . + . ID=gene-NIV78_RS13250;Name=NIV78_RS13250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13250 NZ_CP100136.1 Protein Homology CDS 2807974 2808813 . + 0 ID=cds-WP_015876680.1;Parent=gene-NIV78_RS13250;Dbxref=Genbank:WP_015876680.1;Name=WP_015876680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876680.1;locus_tag=NIV78_RS13250;product=hypothetical protein;protein_id=WP_015876680.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2808817 2809110 . + . ID=gene-NIV78_RS13255;Name=NIV78_RS13255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13255 NZ_CP100136.1 Protein Homology CDS 2808817 2809110 . + 0 ID=cds-WP_015876681.1;Parent=gene-NIV78_RS13255;Dbxref=Genbank:WP_015876681.1;Name=WP_015876681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008918252.1;locus_tag=NIV78_RS13255;product=contact-dependent growth inhibition system immunity protein;protein_id=WP_015876681.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 2809451 2810494 . + . ID=gene-NIV78_RS13260;Name=NIV78_RS13260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS13260;pseudo=true NZ_CP100136.1 Protein Homology CDS 2809451 2810494 . + 0 ID=cds-NIV78_RS13260;Parent=gene-NIV78_RS13260;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612082.1;locus_tag=NIV78_RS13260;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 2811074 2812699 . + . ID=gene-NIV78_RS13265;Name=NIV78_RS13265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13265 NZ_CP100136.1 GeneMarkS-2+ CDS 2811074 2812699 . + 0 ID=cds-WP_257756942.1;Parent=gene-NIV78_RS13265;Dbxref=Genbank:WP_257756942.1;Name=WP_257756942.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS13265;product=hypothetical protein;protein_id=WP_257756942.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2813242 2814807 . + . ID=gene-NIV78_RS13270;Name=NIV78_RS13270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13270 NZ_CP100136.1 Protein Homology CDS 2813242 2814807 . + 0 ID=cds-WP_236577892.1;Parent=gene-NIV78_RS13270;Dbxref=Genbank:WP_236577892.1;Name=WP_236577892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876683.1;locus_tag=NIV78_RS13270;product=ABC transporter substrate-binding protein;protein_id=WP_236577892.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2814905 2815255 . - . ID=gene-NIV78_RS13275;Name=NIV78_RS13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13275 NZ_CP100136.1 Protein Homology CDS 2814905 2815255 . - 0 ID=cds-WP_017425494.1;Parent=gene-NIV78_RS13275;Dbxref=Genbank:WP_017425494.1;Name=WP_017425494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425494.1;locus_tag=NIV78_RS13275;product=hypothetical protein;protein_id=WP_017425494.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2815526 2815939 . - . ID=gene-NIV78_RS13280;Name=NIV78_RS13280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13280 NZ_CP100136.1 Protein Homology CDS 2815526 2815939 . - 0 ID=cds-WP_017922835.1;Parent=gene-NIV78_RS13280;Dbxref=Genbank:WP_017922835.1;Name=WP_017922835.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023580.2;locus_tag=NIV78_RS13280;product=DUF3592 domain-containing protein;protein_id=WP_017922835.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2816051 2816320 . + . ID=gene-NIV78_RS13285;Name=NIV78_RS13285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13285 NZ_CP100136.1 Protein Homology CDS 2816051 2816320 . + 0 ID=cds-WP_017425492.1;Parent=gene-NIV78_RS13285;Dbxref=Genbank:WP_017425492.1;Name=WP_017425492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425492.1;locus_tag=NIV78_RS13285;product=hypothetical protein;protein_id=WP_017425492.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2816442 2816651 . + . ID=gene-NIV78_RS13290;Name=NIV78_RS13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13290 NZ_CP100136.1 Protein Homology CDS 2816442 2816651 . + 0 ID=cds-WP_015876685.1;Parent=gene-NIV78_RS13290;Dbxref=Genbank:WP_015876685.1;Name=WP_015876685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876685.1;locus_tag=NIV78_RS13290;product=hypothetical protein;protein_id=WP_015876685.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2816746 2817936 . + . ID=gene-NIV78_RS13295;Name=NIV78_RS13295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13295 NZ_CP100136.1 Protein Homology CDS 2816746 2817936 . + 0 ID=cds-WP_251107139.1;Parent=gene-NIV78_RS13295;Dbxref=Genbank:WP_251107139.1;Name=WP_251107139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699013.1;locus_tag=NIV78_RS13295;product=serine hydrolase;protein_id=WP_251107139.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2817974 2818513 . - . ID=gene-NIV78_RS13300;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=NIV78_RS13300 NZ_CP100136.1 Protein Homology CDS 2817974 2818513 . - 0 ID=cds-WP_015876687.1;Parent=gene-NIV78_RS13300;Dbxref=Genbank:WP_015876687.1;Name=WP_015876687.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011401901.1;locus_tag=NIV78_RS13300;product=serine protease inhibitor ecotin;protein_id=WP_015876687.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2818758 2819132 . + . ID=gene-NIV78_RS13305;Name=NIV78_RS13305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13305 NZ_CP100136.1 Protein Homology CDS 2818758 2819132 . + 0 ID=cds-WP_257756946.1;Parent=gene-NIV78_RS13305;Dbxref=Genbank:WP_257756946.1;Name=WP_257756946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876688.1;locus_tag=NIV78_RS13305;product=hypothetical protein;protein_id=WP_257756946.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2819384 2819731 . - . ID=gene-NIV78_RS13310;Name=NIV78_RS13310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13310 NZ_CP100136.1 Protein Homology CDS 2819384 2819731 . - 0 ID=cds-WP_035981820.1;Parent=gene-NIV78_RS13310;Dbxref=Genbank:WP_035981820.1;Name=WP_035981820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876689.1;locus_tag=NIV78_RS13310;product=hypothetical protein;protein_id=WP_035981820.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2819928 2820308 . + . ID=gene-NIV78_RS13315;Name=NIV78_RS13315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13315 NZ_CP100136.1 Protein Homology CDS 2819928 2820308 . + 0 ID=cds-WP_017924830.1;Parent=gene-NIV78_RS13315;Dbxref=Genbank:WP_017924830.1;Name=WP_017924830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600936.1;locus_tag=NIV78_RS13315;product=DUF5594 family protein;protein_id=WP_017924830.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2820499 2821002 . + . ID=gene-NIV78_RS13320;Name=NIV78_RS13320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13320 NZ_CP100136.1 Protein Homology CDS 2820499 2821002 . + 0 ID=cds-WP_017923656.1;Parent=gene-NIV78_RS13320;Dbxref=Genbank:WP_017923656.1;Name=WP_017923656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020065276.1;locus_tag=NIV78_RS13320;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_017923656.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2821137 2822507 . + . ID=gene-NIV78_RS13325;Name=NIV78_RS13325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13325 NZ_CP100136.1 Protein Homology CDS 2821137 2822507 . + 0 ID=cds-WP_017923655.1;Parent=gene-NIV78_RS13325;Dbxref=Genbank:WP_017923655.1;Name=WP_017923655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545919.1;locus_tag=NIV78_RS13325;product=MFS transporter;protein_id=WP_017923655.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2822527 2823174 . - . ID=gene-NIV78_RS13330;Name=NIV78_RS13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13330 NZ_CP100136.1 Protein Homology CDS 2822527 2823174 . - 0 ID=cds-WP_017923654.1;Parent=gene-NIV78_RS13330;Dbxref=Genbank:WP_017923654.1;Name=WP_017923654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876693.1;locus_tag=NIV78_RS13330;product=AAA family ATPase;protein_id=WP_017923654.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2823167 2824585 . - . ID=gene-NIV78_RS13335;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=NIV78_RS13335 NZ_CP100136.1 Protein Homology CDS 2823167 2824585 . - 0 ID=cds-WP_257756947.1;Parent=gene-NIV78_RS13335;Dbxref=Genbank:WP_257756947.1;Name=WP_257756947.1;Ontology_term=GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601718.1;locus_tag=NIV78_RS13335;product=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming);protein_id=WP_257756947.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2824768 2824965 . - . ID=gene-NIV78_RS13340;Name=NIV78_RS13340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13340 NZ_CP100136.1 Protein Homology CDS 2824768 2824965 . - 0 ID=cds-WP_017923653.1;Parent=gene-NIV78_RS13340;Dbxref=Genbank:WP_017923653.1;Name=WP_017923653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876695.1;locus_tag=NIV78_RS13340;product=hypothetical protein;protein_id=WP_017923653.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2825224 2825859 . + . ID=gene-NIV78_RS13345;Name=NIV78_RS13345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13345 NZ_CP100136.1 Protein Homology CDS 2825224 2825859 . + 0 ID=cds-WP_015876696.1;Parent=gene-NIV78_RS13345;Dbxref=Genbank:WP_015876696.1;Name=WP_015876696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526348.1;locus_tag=NIV78_RS13345;product=hypothetical protein;protein_id=WP_015876696.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2825856 2826353 . + . ID=gene-NIV78_RS13350;Name=NIV78_RS13350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13350 NZ_CP100136.1 Protein Homology CDS 2825856 2826353 . + 0 ID=cds-WP_015876697.1;Parent=gene-NIV78_RS13350;Dbxref=Genbank:WP_015876697.1;Name=WP_015876697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018443675.1;locus_tag=NIV78_RS13350;product=hypothetical protein;protein_id=WP_015876697.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2826418 2827743 . - . ID=gene-NIV78_RS13355;Name=NIV78_RS13355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13355 NZ_CP100136.1 Protein Homology CDS 2826418 2827743 . - 0 ID=cds-WP_015876698.1;Parent=gene-NIV78_RS13355;Dbxref=Genbank:WP_015876698.1;Name=WP_015876698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892432.1;locus_tag=NIV78_RS13355;product=nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein;protein_id=WP_015876698.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2827766 2829520 . - . ID=gene-NIV78_RS13360;Name=NIV78_RS13360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13360 NZ_CP100136.1 Protein Homology CDS 2827766 2829520 . - 0 ID=cds-WP_015876699.1;Parent=gene-NIV78_RS13360;Dbxref=Genbank:WP_015876699.1;Name=WP_015876699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892433.1;locus_tag=NIV78_RS13360;product=ABC transporter permease subunit;protein_id=WP_015876699.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2830020 2830286 . + . ID=gene-NIV78_RS13365;Name=NIV78_RS13365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13365 NZ_CP100136.1 Protein Homology CDS 2830020 2830286 . + 0 ID=cds-WP_015876700.1;Parent=gene-NIV78_RS13365;Dbxref=Genbank:WP_015876700.1;Name=WP_015876700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876700.1;locus_tag=NIV78_RS13365;product=hypothetical protein;protein_id=WP_015876700.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2830351 2831664 . - . ID=gene-NIV78_RS13370;Name=NIV78_RS13370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13370 NZ_CP100136.1 Protein Homology CDS 2830351 2831664 . - 0 ID=cds-WP_015876701.1;Parent=gene-NIV78_RS13370;Dbxref=Genbank:WP_015876701.1;Name=WP_015876701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424617.1;locus_tag=NIV78_RS13370;product=ATP-binding protein;protein_id=WP_015876701.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2831648 2832373 . - . ID=gene-NIV78_RS13375;Name=NIV78_RS13375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13375 NZ_CP100136.1 Protein Homology CDS 2831648 2832373 . - 0 ID=cds-WP_015876702.1;Parent=gene-NIV78_RS13375;Dbxref=Genbank:WP_015876702.1;Name=WP_015876702.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699030.1;locus_tag=NIV78_RS13375;product=response regulator;protein_id=WP_015876702.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2832606 2833160 . + . ID=gene-NIV78_RS13380;Name=NIV78_RS13380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13380 NZ_CP100136.1 Protein Homology CDS 2832606 2833160 . + 0 ID=cds-WP_017923406.1;Parent=gene-NIV78_RS13380;Dbxref=Genbank:WP_017923406.1;Name=WP_017923406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876703.1;locus_tag=NIV78_RS13380;product=periplasmic heavy metal sensor;protein_id=WP_017923406.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2833540 2834316 . + . ID=gene-NIV78_RS13385;Name=NIV78_RS13385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13385 NZ_CP100136.1 Protein Homology CDS 2833540 2834316 . + 0 ID=cds-WP_017424616.1;Parent=gene-NIV78_RS13385;Dbxref=Genbank:WP_017424616.1;Name=WP_017424616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024925.1;locus_tag=NIV78_RS13385;product=ABC transporter substrate-binding protein;protein_id=WP_017424616.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2834497 2835186 . + . ID=gene-NIV78_RS13390;Name=NIV78_RS13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13390 NZ_CP100136.1 Protein Homology CDS 2834497 2835186 . + 0 ID=cds-WP_015876705.1;Parent=gene-NIV78_RS13390;Dbxref=Genbank:WP_015876705.1;Name=WP_015876705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522525.1;locus_tag=NIV78_RS13390;product=ABC transporter permease;protein_id=WP_015876705.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2835183 2835896 . + . ID=gene-NIV78_RS13395;Name=NIV78_RS13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13395 NZ_CP100136.1 Protein Homology CDS 2835183 2835896 . + 0 ID=cds-WP_015876706.1;Parent=gene-NIV78_RS13395;Dbxref=Genbank:WP_015876706.1;Name=WP_015876706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020065252.1;locus_tag=NIV78_RS13395;product=ABC transporter permease;protein_id=WP_015876706.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2835927 2836694 . + . ID=gene-NIV78_RS13400;Name=NIV78_RS13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13400 NZ_CP100136.1 Protein Homology CDS 2835927 2836694 . + 0 ID=cds-WP_251107551.1;Parent=gene-NIV78_RS13400;Dbxref=Genbank:WP_251107551.1;Name=WP_251107551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003085940.1;locus_tag=NIV78_RS13400;product=ATP-binding cassette domain-containing protein;protein_id=WP_251107551.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2837420 2838514 . + . ID=gene-NIV78_RS13405;Name=NIV78_RS13405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13405 NZ_CP100136.1 Protein Homology CDS 2837420 2838514 . + 0 ID=cds-WP_017923561.1;Parent=gene-NIV78_RS13405;Dbxref=Genbank:WP_017923561.1;Name=WP_017923561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004534273.1;locus_tag=NIV78_RS13405;product=porin;protein_id=WP_017923561.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2838676 2839014 . - . ID=gene-NIV78_RS13410;Name=NIV78_RS13410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13410 NZ_CP100136.1 Protein Homology CDS 2838676 2839014 . - 0 ID=cds-WP_013699037.1;Parent=gene-NIV78_RS13410;Dbxref=Genbank:WP_013699037.1;Name=WP_013699037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018419771.1;locus_tag=NIV78_RS13410;product=P-II family nitrogen regulator;protein_id=WP_013699037.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2839068 2840753 . - . ID=gene-NIV78_RS13415;Name=NIV78_RS13415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13415 NZ_CP100136.1 Protein Homology CDS 2839068 2840753 . - 0 ID=cds-WP_017923560.1;Parent=gene-NIV78_RS13415;Dbxref=Genbank:WP_017923560.1;Name=WP_017923560.1;Ontology_term=GO:0009435,GO:0003952,GO:0005524;gbkey=CDS;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,ATP binding|0005524||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699038.1;locus_tag=NIV78_RS13415;product=NAD+ synthase;protein_id=WP_017923560.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2840856 2842034 . + . ID=gene-NIV78_RS13420;Name=NIV78_RS13420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13420 NZ_CP100136.1 Protein Homology CDS 2840856 2842034 . + 0 ID=cds-WP_015876710.1;Parent=gene-NIV78_RS13420;Dbxref=Genbank:WP_015876710.1;Name=WP_015876710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011832356.1;locus_tag=NIV78_RS13420;product=GNAT family N-acetyltransferase;protein_id=WP_015876710.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 2842084 2842353 . + . ID=gene-NIV78_RS13425;Name=NIV78_RS13425;end_range=2842353,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS13425;partial=true;pseudo=true NZ_CP100136.1 Protein Homology CDS 2842084 2842353 . + 0 ID=cds-NIV78_RS13425;Parent=gene-NIV78_RS13425;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2842353,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489661.1;locus_tag=NIV78_RS13425;partial=true;product=GIY-YIG nuclease family protein;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 2842665 2843192 . - . ID=gene-NIV78_RS13430;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=NIV78_RS13430 NZ_CP100136.1 Protein Homology CDS 2842665 2843192 . - 0 ID=cds-WP_015876712.1;Parent=gene-NIV78_RS13430;Dbxref=Genbank:WP_015876712.1;Name=WP_015876712.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007587974.1;locus_tag=NIV78_RS13430;product=inorganic diphosphatase;protein_id=WP_015876712.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2843418 2844857 . + . ID=gene-NIV78_RS13435;Name=NIV78_RS13435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13435 NZ_CP100136.1 Protein Homology CDS 2843418 2844857 . + 0 ID=cds-WP_251107141.1;Parent=gene-NIV78_RS13435;Dbxref=Genbank:WP_251107141.1;Name=WP_251107141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352864.1;locus_tag=NIV78_RS13435;product=aldehyde dehydrogenase family protein;protein_id=WP_251107141.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2844932 2845690 . + . ID=gene-NIV78_RS13440;Name=NIV78_RS13440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13440 NZ_CP100136.1 Protein Homology CDS 2844932 2845690 . + 0 ID=cds-WP_017923498.1;Parent=gene-NIV78_RS13440;Dbxref=Genbank:WP_017923498.1;Name=WP_017923498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004543860.1;locus_tag=NIV78_RS13440;product=SDR family oxidoreductase;protein_id=WP_017923498.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2845803 2847107 . + . ID=gene-NIV78_RS13445;Name=NIV78_RS13445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13445 NZ_CP100136.1 Protein Homology CDS 2845803 2847107 . + 0 ID=cds-WP_017923497.1;Parent=gene-NIV78_RS13445;Dbxref=Genbank:WP_017923497.1;Name=WP_017923497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699044.1;locus_tag=NIV78_RS13445;product=MFS transporter;protein_id=WP_017923497.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2847180 2848370 . - . ID=gene-NIV78_RS13450;Name=NIV78_RS13450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13450 NZ_CP100136.1 Protein Homology CDS 2847180 2848370 . - 0 ID=cds-WP_043226125.1;Parent=gene-NIV78_RS13450;Dbxref=Genbank:WP_043226125.1;Name=WP_043226125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876716.1;locus_tag=NIV78_RS13450;product=heme biosynthesis protein HemY;protein_id=WP_043226125.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2848373 2850652 . - . ID=gene-NIV78_RS13455;Name=hemDX;gbkey=Gene;gene=hemDX;gene_biotype=protein_coding;locus_tag=NIV78_RS13455 NZ_CP100136.1 Protein Homology CDS 2848373 2850652 . - 0 ID=cds-WP_100556019.1;Parent=gene-NIV78_RS13455;Dbxref=Genbank:WP_100556019.1;Name=WP_100556019.1;Ontology_term=GO:0033014,GO:0004852;gbkey=CDS;gene=hemDX;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699046.1;locus_tag=NIV78_RS13455;product=fused uroporphyrinogen-III synthase HemD/membrane protein HemX;protein_id=WP_100556019.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2850649 2851617 . - . ID=gene-NIV78_RS13460;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=NIV78_RS13460 NZ_CP100136.1 Protein Homology CDS 2850649 2851617 . - 0 ID=cds-WP_257756950.1;Parent=gene-NIV78_RS13460;Dbxref=Genbank:WP_257756950.1;Name=WP_257756950.1;Ontology_term=GO:0006779,GO:0004418,GO:0005737;gbkey=CDS;gene=hemC;go_component=cytoplasm|0005737||IEA;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876718.1;locus_tag=NIV78_RS13460;product=hydroxymethylbilane synthase;protein_id=WP_257756950.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2851811 2854906 . + . ID=gene-NIV78_RS13465;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=NIV78_RS13465 NZ_CP100136.1 Protein Homology CDS 2851811 2854906 . + 0 ID=cds-WP_257756952.1;Parent=gene-NIV78_RS13465;Dbxref=Genbank:WP_257756952.1;Name=WP_257756952.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191560.1;locus_tag=NIV78_RS13465;product=phosphoenolpyruvate carboxylase;protein_id=WP_257756952.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2855157 2855987 . + . ID=gene-NIV78_RS13470;Name=NIV78_RS13470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13470 NZ_CP100136.1 Protein Homology CDS 2855157 2855987 . + 0 ID=cds-WP_015876720.1;Parent=gene-NIV78_RS13470;Dbxref=Genbank:WP_015876720.1;Name=WP_015876720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876720.1;locus_tag=NIV78_RS13470;product=helix-turn-helix transcriptional regulator;protein_id=WP_015876720.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2856158 2857564 . + . ID=gene-NIV78_RS13475;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=NIV78_RS13475 NZ_CP100136.1 Protein Homology CDS 2856158 2857564 . + 0 ID=cds-WP_017923474.1;Parent=gene-NIV78_RS13475;Dbxref=Genbank:WP_017923474.1;Name=WP_017923474.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876721.1;locus_tag=NIV78_RS13475;product=argininosuccinate lyase;protein_id=WP_017923474.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2857669 2858376 . - . ID=gene-NIV78_RS13480;Name=NIV78_RS13480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13480 NZ_CP100136.1 Protein Homology CDS 2857669 2858376 . - 0 ID=cds-WP_017423934.1;Parent=gene-NIV78_RS13480;Dbxref=Genbank:WP_017423934.1;Name=WP_017423934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876722.1;locus_tag=NIV78_RS13480;product=LprI family protein;protein_id=WP_017423934.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2858397 2860676 . - . ID=gene-NIV78_RS13485;Name=NIV78_RS13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13485 NZ_CP100136.1 Protein Homology CDS 2858397 2860676 . - 0 ID=cds-WP_015876723.1;Parent=gene-NIV78_RS13485;Dbxref=Genbank:WP_015876723.1;Name=WP_015876723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491304.1;locus_tag=NIV78_RS13485;product=arginine/lysine/ornithine decarboxylase;protein_id=WP_015876723.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2860765 2861334 . - . ID=gene-NIV78_RS13490;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=NIV78_RS13490 NZ_CP100136.1 Protein Homology CDS 2860765 2861334 . - 0 ID=cds-WP_015876724.1;Parent=gene-NIV78_RS13490;Dbxref=Genbank:WP_015876724.1;Name=WP_015876724.1;Ontology_term=GO:0009394,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=2'-deoxyribonucleotide metabolic process|0009394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398615.1;locus_tag=NIV78_RS13490;product=dCTP deaminase;protein_id=WP_015876724.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2861445 2861915 . - . ID=gene-NIV78_RS13495;Name=NIV78_RS13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13495 NZ_CP100136.1 Protein Homology CDS 2861445 2861915 . - 0 ID=cds-WP_237657779.1;Parent=gene-NIV78_RS13495;Dbxref=Genbank:WP_237657779.1;Name=WP_237657779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416839.1;locus_tag=NIV78_RS13495;product=superoxide dismutase family protein;protein_id=WP_237657779.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2862098 2863186 . - . ID=gene-NIV78_RS13500;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=NIV78_RS13500 NZ_CP100136.1 Protein Homology CDS 2862098 2863186 . - 0 ID=cds-WP_017923651.1;Parent=gene-NIV78_RS13500;Dbxref=Genbank:WP_017923651.1;Name=WP_017923651.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600266.1;locus_tag=NIV78_RS13500;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_017923651.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2863520 2864179 . + . ID=gene-NIV78_RS13505;Name=NIV78_RS13505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13505 NZ_CP100136.1 Protein Homology CDS 2863520 2864179 . + 0 ID=cds-WP_015876727.1;Parent=gene-NIV78_RS13505;Dbxref=Genbank:WP_015876727.1;Name=WP_015876727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699058.1;locus_tag=NIV78_RS13505;product=OmpA family protein;protein_id=WP_015876727.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2864674 2866830 . + . ID=gene-NIV78_RS13510;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=NIV78_RS13510 NZ_CP100136.1 Protein Homology CDS 2864674 2866830 . + 0 ID=cds-WP_017923580.1;Parent=gene-NIV78_RS13510;Dbxref=Genbank:WP_017923580.1;Name=WP_017923580.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699059.1;locus_tag=NIV78_RS13510;product=methionine--tRNA ligase;protein_id=WP_017923580.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2866927 2871087 . - . ID=gene-NIV78_RS13515;Name=NIV78_RS13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13515 NZ_CP100136.1 Protein Homology CDS 2866927 2871087 . - 0 ID=cds-WP_100556005.1;Parent=gene-NIV78_RS13515;Dbxref=Genbank:WP_100556005.1;Name=WP_100556005.1;Ontology_term=GO:0009306,GO:0005887;gbkey=CDS;go_component=integral component of plasma membrane|0005887||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876729.1;locus_tag=NIV78_RS13515;product=translocation/assembly module TamB domain-containing protein;protein_id=WP_100556005.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2871110 2872867 . - . ID=gene-NIV78_RS13520;Name=NIV78_RS13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13520 NZ_CP100136.1 Protein Homology CDS 2871110 2872867 . - 0 ID=cds-WP_230674524.1;Parent=gene-NIV78_RS13520;Dbxref=Genbank:WP_230674524.1;Name=WP_230674524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876730.1;locus_tag=NIV78_RS13520;product=BamA/TamA family outer membrane protein;protein_id=WP_230674524.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2873185 2873373 . + . ID=gene-NIV78_RS13525;Name=NIV78_RS13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13525 NZ_CP100136.1 Protein Homology CDS 2873185 2873373 . + 0 ID=cds-WP_015876731.1;Parent=gene-NIV78_RS13525;Dbxref=Genbank:WP_015876731.1;Name=WP_015876731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333879.1;locus_tag=NIV78_RS13525;product=DUF3460 family protein;protein_id=WP_015876731.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2873378 2874247 . + . ID=gene-NIV78_RS13530;Name=NIV78_RS13530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13530 NZ_CP100136.1 Protein Homology CDS 2873378 2874247 . + 0 ID=cds-WP_017423563.1;Parent=gene-NIV78_RS13530;Dbxref=Genbank:WP_017423563.1;Name=WP_017423563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010102217.1;locus_tag=NIV78_RS13530;product=segregation/condensation protein A;protein_id=WP_017423563.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2874459 2875298 . + . ID=gene-NIV78_RS13535;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=NIV78_RS13535 NZ_CP100136.1 Protein Homology CDS 2874459 2875298 . + 0 ID=cds-WP_015876733.1;Parent=gene-NIV78_RS13535;Dbxref=Genbank:WP_015876733.1;Name=WP_015876733.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352891.1;locus_tag=NIV78_RS13535;product=pantoate--beta-alanine ligase;protein_id=WP_015876733.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2875343 2875729 . + . ID=gene-NIV78_RS13540;Name=NIV78_RS13540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13540 NZ_CP100136.1 Protein Homology CDS 2875343 2875729 . + 0 ID=cds-WP_015876734.1;Parent=gene-NIV78_RS13540;Dbxref=Genbank:WP_015876734.1;Name=WP_015876734.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006048527.1;locus_tag=NIV78_RS13540;product=aspartate 1-decarboxylase;protein_id=WP_015876734.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2875933 2876595 . - . ID=gene-NIV78_RS13545;Name=NIV78_RS13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13545 NZ_CP100136.1 Protein Homology CDS 2875933 2876595 . - 0 ID=cds-WP_015876735.1;Parent=gene-NIV78_RS13545;Dbxref=Genbank:WP_015876735.1;Name=WP_015876735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876735.1;locus_tag=NIV78_RS13545;product=ParA family protein;protein_id=WP_015876735.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2876798 2877226 . - . ID=gene-NIV78_RS13550;Name=NIV78_RS13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13550 NZ_CP100136.1 Protein Homology CDS 2876798 2877226 . - 0 ID=cds-WP_015876736.1;Parent=gene-NIV78_RS13550;Dbxref=Genbank:WP_015876736.1;Name=WP_015876736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876736.1;locus_tag=NIV78_RS13550;product=DoxX family protein;protein_id=WP_015876736.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 2877342 2878914 . - . ID=gene-NIV78_RS13555;Name=NIV78_RS13555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS13555;pseudo=true NZ_CP100136.1 Protein Homology CDS 2877342 2878914 . - 0 ID=cds-NIV78_RS13555;Parent=gene-NIV78_RS13555;Note=frameshifted;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004206822.1;locus_tag=NIV78_RS13555;product=cobyric acid synthase;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 2878918 2879502 . + . ID=gene-NIV78_RS13560;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=NIV78_RS13560 NZ_CP100136.1 Protein Homology CDS 2878918 2879502 . + 0 ID=cds-WP_015876738.1;Parent=gene-NIV78_RS13560;Dbxref=Genbank:WP_015876738.1;Name=WP_015876738.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090997.1;locus_tag=NIV78_RS13560;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_015876738.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2879496 2880440 . + . ID=gene-NIV78_RS13565;Name=cbiB;gbkey=Gene;gene=cbiB;gene_biotype=protein_coding;locus_tag=NIV78_RS13565 NZ_CP100136.1 Protein Homology CDS 2879496 2880440 . + 0 ID=cds-WP_015876739.1;Parent=gene-NIV78_RS13565;Dbxref=Genbank:WP_015876739.1;Name=WP_015876739.1;Ontology_term=GO:0009236,GO:0016880;gbkey=CDS;gene=cbiB;go_function=acid-ammonia (or amide) ligase activity|0016880||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526314.1;locus_tag=NIV78_RS13565;product=adenosylcobinamide-phosphate synthase CbiB;protein_id=WP_015876739.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2880606 2881685 . + . ID=gene-NIV78_RS13570;Name=cobD;gbkey=Gene;gene=cobD;gene_biotype=protein_coding;locus_tag=NIV78_RS13570 NZ_CP100136.1 Protein Homology CDS 2880606 2881685 . + 0 ID=cds-WP_124836273.1;Parent=gene-NIV78_RS13570;Dbxref=Genbank:WP_124836273.1;Name=WP_124836273.1;Ontology_term=GO:0009236,GO:0048472,GO:0005737;gbkey=CDS;gene=cobD;go_component=cytoplasm|0005737||IEA;go_function=threonine-phosphate decarboxylase activity|0048472||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876740.1;locus_tag=NIV78_RS13570;product=threonine-phosphate decarboxylase CobD;protein_id=WP_124836273.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2881689 2882660 . + . ID=gene-NIV78_RS13575;Name=NIV78_RS13575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13575 NZ_CP100136.1 Protein Homology CDS 2881689 2882660 . + 0 ID=cds-WP_257756956.1;Parent=gene-NIV78_RS13575;Dbxref=Genbank:WP_257756956.1;Name=WP_257756956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876741.1;locus_tag=NIV78_RS13575;product=cobalamin-binding protein;protein_id=WP_257756956.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2882868 2883461 . - . ID=gene-NIV78_RS13580;Name=cobC;gbkey=Gene;gene=cobC;gene_biotype=protein_coding;locus_tag=NIV78_RS13580 NZ_CP100136.1 Protein Homology CDS 2882868 2883461 . - 0 ID=cds-WP_100556007.1;Parent=gene-NIV78_RS13580;Dbxref=Genbank:WP_100556007.1;Name=WP_100556007.1;Ontology_term=GO:0009236,GO:0043755;gbkey=CDS;gene=cobC;go_function=alpha-ribazole phosphatase activity|0043755||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876742.1;locus_tag=NIV78_RS13580;product=alpha-ribazole phosphatase;protein_id=WP_100556007.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2883446 2884213 . - . ID=gene-NIV78_RS13585;Name=NIV78_RS13585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13585 NZ_CP100136.1 Protein Homology CDS 2883446 2884213 . - 0 ID=cds-WP_015876743.1;Parent=gene-NIV78_RS13585;Dbxref=Genbank:WP_015876743.1;Name=WP_015876743.1;Ontology_term=GO:0051073;gbkey=CDS;go_function=adenosylcobinamide-GDP ribazoletransferase activity|0051073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522561.1;locus_tag=NIV78_RS13585;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_015876743.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2884227 2885282 . - . ID=gene-NIV78_RS13590;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=NIV78_RS13590 NZ_CP100136.1 Protein Homology CDS 2884227 2885282 . - 0 ID=cds-WP_015876744.1;Parent=gene-NIV78_RS13590;Dbxref=Genbank:WP_015876744.1;Name=WP_015876744.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010114335.1;locus_tag=NIV78_RS13590;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_015876744.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2885359 2886195 . - . ID=gene-NIV78_RS13595;Name=NIV78_RS13595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13595 NZ_CP100136.1 Protein Homology CDS 2885359 2886195 . - 0 ID=cds-WP_039203026.1;Parent=gene-NIV78_RS13595;Dbxref=Genbank:WP_039203026.1;Name=WP_039203026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478094.1;locus_tag=NIV78_RS13595;product=ABC transporter ATP-binding protein;protein_id=WP_039203026.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2886192 2887211 . - . ID=gene-NIV78_RS13600;Name=NIV78_RS13600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13600 NZ_CP100136.1 Protein Homology CDS 2886192 2887211 . - 0 ID=cds-WP_039203029.1;Parent=gene-NIV78_RS13600;Dbxref=Genbank:WP_039203029.1;Name=WP_039203029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892506.1;locus_tag=NIV78_RS13600;product=iron ABC transporter permease;protein_id=WP_039203029.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2887275 2889209 . - . ID=gene-NIV78_RS13605;Name=NIV78_RS13605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13605 NZ_CP100136.1 Protein Homology CDS 2887275 2889209 . - 0 ID=cds-WP_017424511.1;Parent=gene-NIV78_RS13605;Dbxref=Genbank:WP_017424511.1;Name=WP_017424511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424511.1;locus_tag=NIV78_RS13605;product=TonB-dependent receptor;protein_id=WP_017424511.1;transl_table=11 NZ_CP100136.1 cmsearch riboswitch 2889285 2889567 . - . ID=id-NZ_CP100136.1:2889285..2889567;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP100136.1 RefSeq gene 2889801 2890151 . + . ID=gene-NIV78_RS13610;Name=NIV78_RS13610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13610 NZ_CP100136.1 Protein Homology CDS 2889801 2890151 . + 0 ID=cds-WP_015876747.1;Parent=gene-NIV78_RS13610;Dbxref=Genbank:WP_015876747.1;Name=WP_015876747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600179.1;locus_tag=NIV78_RS13610;product=ATPase;protein_id=WP_015876747.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2890148 2890462 . + . ID=gene-NIV78_RS13615;Name=NIV78_RS13615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13615 NZ_CP100136.1 Protein Homology CDS 2890148 2890462 . + 0 ID=cds-WP_015876748.1;Parent=gene-NIV78_RS13615;Dbxref=Genbank:WP_015876748.1;Name=WP_015876748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024874.1;locus_tag=NIV78_RS13615;product=cell division protein ZapA;protein_id=WP_015876748.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2890520 2890701 . + . ID=gene-NIV78_RS13620;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=NIV78_RS13620 NZ_CP100136.1 cmsearch ncRNA 2890520 2890701 . + . ID=rna-NIV78_RS13620;Parent=gene-NIV78_RS13620;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS13620;product=6S RNA NZ_CP100136.1 cmsearch exon 2890520 2890701 . + . ID=exon-NIV78_RS13620-1;Parent=rna-NIV78_RS13620;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS13620;product=6S RNA NZ_CP100136.1 RefSeq gene 2890813 2891274 . + . ID=gene-NIV78_RS13625;Name=NIV78_RS13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13625 NZ_CP100136.1 Protein Homology CDS 2890813 2891274 . + 0 ID=cds-WP_015876749.1;Parent=gene-NIV78_RS13625;Dbxref=Genbank:WP_015876749.1;Name=WP_015876749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602326.1;locus_tag=NIV78_RS13625;product=EVE domain-containing protein;protein_id=WP_015876749.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2891472 2892185 . + . ID=gene-NIV78_RS13630;Name=NIV78_RS13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13630 NZ_CP100136.1 Protein Homology CDS 2891472 2892185 . + 0 ID=cds-WP_015876750.1;Parent=gene-NIV78_RS13630;Dbxref=Genbank:WP_015876750.1;Name=WP_015876750.1;Note=The SIMPL domain is named for its presence in mouse protein SIMPL (signalling molecule that associates with mouse pelle-like kinase). Bacterial member BP26%2C from Brucella%2C was shown to assemble into a channel-like structure%2C while YggE from E. coli has been associated with resistance to oxidative stress.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876750.1;locus_tag=NIV78_RS13630;product=SIMPL domain-containing protein;protein_id=WP_015876750.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2892288 2893178 . - . ID=gene-NIV78_RS13635;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=NIV78_RS13635 NZ_CP100136.1 Protein Homology CDS 2892288 2893178 . - 0 ID=cds-WP_017923851.1;Parent=gene-NIV78_RS13635;Dbxref=Genbank:WP_017923851.1;Name=WP_017923851.1;Ontology_term=GO:0009249,GO:0008961,GO:0016021;gbkey=CDS;gene=lgt;go_component=integral component of membrane|0016021||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657673.1;locus_tag=NIV78_RS13635;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_017923851.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2893863 2894189 . + . ID=gene-NIV78_RS13640;Name=NIV78_RS13640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13640 NZ_CP100136.1 Protein Homology CDS 2893863 2894189 . + 0 ID=cds-WP_015876752.1;Parent=gene-NIV78_RS13640;Dbxref=Genbank:WP_015876752.1;Name=WP_015876752.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876752.1;locus_tag=NIV78_RS13640;product=c-type cytochrome;protein_id=WP_015876752.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2894294 2895760 . - . ID=gene-NIV78_RS13645;Name=NIV78_RS13645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13645 NZ_CP100136.1 Protein Homology CDS 2894294 2895760 . - 0 ID=cds-WP_257756958.1;Parent=gene-NIV78_RS13645;Dbxref=Genbank:WP_257756958.1;Name=WP_257756958.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022132.2;locus_tag=NIV78_RS13645;product=DUF2486 family protein;protein_id=WP_257756958.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2895779 2896195 . - . ID=gene-NIV78_RS13650;Name=NIV78_RS13650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13650 NZ_CP100136.1 Protein Homology CDS 2895779 2896195 . - 0 ID=cds-WP_015876754.1;Parent=gene-NIV78_RS13650;Dbxref=Genbank:WP_015876754.1;Name=WP_015876754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193228.1;locus_tag=NIV78_RS13650;product=DNA polymerase III subunit chi;protein_id=WP_015876754.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2896227 2897738 . - . ID=gene-NIV78_RS13655;Name=NIV78_RS13655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13655 NZ_CP100136.1 Protein Homology CDS 2896227 2897738 . - 0 ID=cds-WP_257756960.1;Parent=gene-NIV78_RS13655;Dbxref=Genbank:WP_257756960.1;Name=WP_257756960.1;Ontology_term=GO:0019538,GO:0070006;gbkey=CDS;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522572.1;locus_tag=NIV78_RS13655;product=leucyl aminopeptidase;protein_id=WP_257756960.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2897848 2898939 . + . ID=gene-NIV78_RS13660;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=NIV78_RS13660 NZ_CP100136.1 Protein Homology CDS 2897848 2898939 . + 0 ID=cds-WP_015876756.1;Parent=gene-NIV78_RS13660;Dbxref=Genbank:WP_015876756.1;Name=WP_015876756.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptF;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545981.1;locus_tag=NIV78_RS13660;product=LPS export ABC transporter permease LptF;protein_id=WP_015876756.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2898943 2900091 . + . ID=gene-NIV78_RS13665;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=NIV78_RS13665 NZ_CP100136.1 Protein Homology CDS 2898943 2900091 . + 0 ID=cds-WP_015876757.1;Parent=gene-NIV78_RS13665;Dbxref=Genbank:WP_015876757.1;Name=WP_015876757.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptG;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009903370.1;locus_tag=NIV78_RS13665;product=LPS export ABC transporter permease LptG;protein_id=WP_015876757.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2900122 2900496 . + . ID=gene-NIV78_RS13670;Name=NIV78_RS13670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13670 NZ_CP100136.1 Protein Homology CDS 2900122 2900496 . + 0 ID=cds-WP_015876758.1;Parent=gene-NIV78_RS13670;Dbxref=Genbank:WP_015876758.1;Name=WP_015876758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876758.1;locus_tag=NIV78_RS13670;product=CbiX/SirB N-terminal domain-containing protein;protein_id=WP_015876758.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2900581 2901357 . - . ID=gene-NIV78_RS13675;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=NIV78_RS13675 NZ_CP100136.1 Protein Homology CDS 2900581 2901357 . - 0 ID=cds-WP_015876759.1;Parent=gene-NIV78_RS13675;Dbxref=Genbank:WP_015876759.1;Name=WP_015876759.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004531983.1;locus_tag=NIV78_RS13675;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_015876759.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2901412 2902728 . - . ID=gene-NIV78_RS13680;Name=NIV78_RS13680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13680 NZ_CP100136.1 Protein Homology CDS 2901412 2902728 . - 0 ID=cds-WP_017922781.1;Parent=gene-NIV78_RS13680;Dbxref=Genbank:WP_017922781.1;Name=WP_017922781.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602383.1;locus_tag=NIV78_RS13680;product=GTP-binding protein;protein_id=WP_017922781.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2902751 2903713 . - . ID=gene-NIV78_RS13685;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=NIV78_RS13685 NZ_CP100136.1 Protein Homology CDS 2902751 2903713 . - 0 ID=cds-WP_015876761.1;Parent=gene-NIV78_RS13685;Dbxref=Genbank:WP_015876761.1;Name=WP_015876761.1;Ontology_term=GO:0019419,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate reduction|0019419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010114318.1;locus_tag=NIV78_RS13685;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_015876761.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2903804 2904538 . - . ID=gene-NIV78_RS13690;Name=NIV78_RS13690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13690 NZ_CP100136.1 Protein Homology CDS 2903804 2904538 . - 0 ID=cds-WP_017423668.1;Parent=gene-NIV78_RS13690;Dbxref=Genbank:WP_017423668.1;Name=WP_017423668.1;Ontology_term=GO:0019379,GO:0003824,GO:0004604;gbkey=CDS;go_function=catalytic activity|0003824||IEA,phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423668.1;locus_tag=NIV78_RS13690;product=phosphoadenylyl-sulfate reductase;protein_id=WP_017423668.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2904535 2905077 . - . ID=gene-NIV78_RS13695;Name=NIV78_RS13695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13695 NZ_CP100136.1 Protein Homology CDS 2904535 2905077 . - 0 ID=cds-WP_017922782.1;Parent=gene-NIV78_RS13695;Dbxref=Genbank:WP_017922782.1;Name=WP_017922782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484805.1;locus_tag=NIV78_RS13695;product=DUF934 domain-containing protein;protein_id=WP_017922782.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2905098 2906777 . - . ID=gene-NIV78_RS13700;Name=NIV78_RS13700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13700 NZ_CP100136.1 Protein Homology CDS 2905098 2906777 . - 0 ID=cds-WP_015876764.1;Parent=gene-NIV78_RS13700;Dbxref=Genbank:WP_015876764.1;Name=WP_015876764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601281.1;locus_tag=NIV78_RS13700;product=nitrite/sulfite reductase;protein_id=WP_015876764.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2907001 2907942 . + . ID=gene-NIV78_RS13705;Name=NIV78_RS13705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13705 NZ_CP100136.1 Protein Homology CDS 2907001 2907942 . + 0 ID=cds-WP_015876765.1;Parent=gene-NIV78_RS13705;Dbxref=Genbank:WP_015876765.1;Name=WP_015876765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020065144.1;locus_tag=NIV78_RS13705;product=CysB family HTH-type transcriptional regulator;protein_id=WP_015876765.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2908104 2908188 . + . ID=gene-NIV78_RS13710;Name=NIV78_RS13710;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS13710 NZ_CP100136.1 tRNAscan-SE tRNA 2908104 2908188 . + . ID=rna-NIV78_RS13710;Parent=gene-NIV78_RS13710;anticodon=(pos:2908138..2908140);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS13710;product=tRNA-Leu NZ_CP100136.1 tRNAscan-SE exon 2908104 2908188 . + . ID=exon-NIV78_RS13710-1;Parent=rna-NIV78_RS13710;anticodon=(pos:2908138..2908140);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS13710;product=tRNA-Leu NZ_CP100136.1 RefSeq gene 2908364 2909596 . + . ID=gene-NIV78_RS13715;Name=NIV78_RS13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13715 NZ_CP100136.1 Protein Homology CDS 2908364 2909596 . + 0 ID=cds-WP_257756963.1;Parent=gene-NIV78_RS13715;Dbxref=Genbank:WP_257756963.1;Name=WP_257756963.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883071.1;locus_tag=NIV78_RS13715;product=tyrosine-type recombinase/integrase;protein_id=WP_257756963.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2910119 2912386 . - . ID=gene-NIV78_RS13720;Name=NIV78_RS13720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13720 NZ_CP100136.1 GeneMarkS-2+ CDS 2910119 2912386 . - 0 ID=cds-WP_257756965.1;Parent=gene-NIV78_RS13720;Dbxref=Genbank:WP_257756965.1;Name=WP_257756965.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS13720;product=hypothetical protein;protein_id=WP_257756965.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2912762 2913850 . - . ID=gene-NIV78_RS13725;Name=NIV78_RS13725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13725 NZ_CP100136.1 Protein Homology CDS 2912762 2913850 . - 0 ID=cds-WP_257756966.1;Parent=gene-NIV78_RS13725;Dbxref=Genbank:WP_257756966.1;Name=WP_257756966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699113.1;locus_tag=NIV78_RS13725;product=DUF3396 domain-containing protein;protein_id=WP_257756966.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2913856 2914560 . - . ID=gene-NIV78_RS13730;Name=NIV78_RS13730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13730 NZ_CP100136.1 Protein Homology CDS 2913856 2914560 . - 0 ID=cds-WP_257756968.1;Parent=gene-NIV78_RS13730;Dbxref=Genbank:WP_257756968.1;Name=WP_257756968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016038228.1;locus_tag=NIV78_RS13730;product=VRR-NUC domain-containing protein;protein_id=WP_257756968.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2914557 2915066 . - . ID=gene-NIV78_RS13735;Name=NIV78_RS13735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13735 NZ_CP100136.1 Protein Homology CDS 2914557 2915066 . - 0 ID=cds-WP_257756969.1;Parent=gene-NIV78_RS13735;Dbxref=Genbank:WP_257756969.1;Name=WP_257756969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016038229.1;locus_tag=NIV78_RS13735;product=PAAR domain-containing protein;protein_id=WP_257756969.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2915529 2916485 . - . ID=gene-NIV78_RS13740;Name=NIV78_RS13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13740 NZ_CP100136.1 GeneMarkS-2+ CDS 2915529 2916485 . - 0 ID=cds-WP_257756971.1;Parent=gene-NIV78_RS13740;Dbxref=Genbank:WP_257756971.1;Name=WP_257756971.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS13740;product=hypothetical protein;protein_id=WP_257756971.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2916562 2916816 . - . ID=gene-NIV78_RS13745;Name=NIV78_RS13745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13745 NZ_CP100136.1 GeneMarkS-2+ CDS 2916562 2916816 . - 0 ID=cds-WP_257756973.1;Parent=gene-NIV78_RS13745;Dbxref=Genbank:WP_257756973.1;Name=WP_257756973.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS13745;product=hypothetical protein;protein_id=WP_257756973.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2917355 2920054 . - . ID=gene-NIV78_RS13750;Name=NIV78_RS13750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13750 NZ_CP100136.1 Protein Homology CDS 2917355 2920054 . - 0 ID=cds-WP_257756974.1;Parent=gene-NIV78_RS13750;Dbxref=Genbank:WP_257756974.1;Name=WP_257756974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486879.1;locus_tag=NIV78_RS13750;product=DUF927 domain-containing protein;protein_id=WP_257756974.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2920066 2920344 . - . ID=gene-NIV78_RS13755;Name=NIV78_RS13755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13755 NZ_CP100136.1 GeneMarkS-2+ CDS 2920066 2920344 . - 0 ID=cds-WP_208836934.1;Parent=gene-NIV78_RS13755;Dbxref=Genbank:WP_208836934.1;Name=WP_208836934.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS13755;product=hypothetical protein;protein_id=WP_208836934.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2920337 2920516 . - . ID=gene-NIV78_RS13760;Name=NIV78_RS13760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13760 NZ_CP100136.1 Protein Homology CDS 2920337 2920516 . - 0 ID=cds-WP_208836933.1;Parent=gene-NIV78_RS13760;Dbxref=Genbank:WP_208836933.1;Name=WP_208836933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009906782.1;locus_tag=NIV78_RS13760;product=hypothetical protein;protein_id=WP_208836933.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2920819 2921052 . - . ID=gene-NIV78_RS13765;Name=NIV78_RS13765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13765 NZ_CP100136.1 Protein Homology CDS 2920819 2921052 . - 0 ID=cds-WP_175877942.1;Parent=gene-NIV78_RS13765;Dbxref=Genbank:WP_175877942.1;Name=WP_175877942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757121.1;locus_tag=NIV78_RS13765;product=AlpA family phage regulatory protein;protein_id=WP_175877942.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2921350 2922554 . + . ID=gene-NIV78_RS13770;Name=NIV78_RS13770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13770 NZ_CP100136.1 Protein Homology CDS 2921350 2921665 . + 0 ID=cds-WP_085967296.1;Parent=gene-NIV78_RS13770;Dbxref=Genbank:WP_085967296.1;Name=WP_085967296.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558222.1;locus_tag=NIV78_RS13770;product=IS3 family transposase;protein_id=WP_085967296.1;transl_table=11 NZ_CP100136.1 Protein Homology CDS 2921665 2922554 . + 2 ID=cds-WP_085967296.1;Parent=gene-NIV78_RS13770;Dbxref=Genbank:WP_085967296.1;Name=WP_085967296.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558222.1;locus_tag=NIV78_RS13770;product=IS3 family transposase;protein_id=WP_085967296.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2922574 2923425 . - . ID=gene-NIV78_RS13775;Name=NIV78_RS13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13775 NZ_CP100136.1 GeneMarkS-2+ CDS 2922574 2923425 . - 0 ID=cds-WP_257756983.1;Parent=gene-NIV78_RS13775;Dbxref=Genbank:WP_257756983.1;Name=WP_257756983.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS13775;product=hypothetical protein;protein_id=WP_257756983.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2923678 2924397 . + . ID=gene-NIV78_RS13780;Name=NIV78_RS13780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13780 NZ_CP100136.1 Protein Homology CDS 2923678 2924397 . + 0 ID=cds-WP_015876776.1;Parent=gene-NIV78_RS13780;Dbxref=Genbank:WP_015876776.1;Name=WP_015876776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423670.1;locus_tag=NIV78_RS13780;product=16S rRNA pseudouridine(516) synthase;protein_id=WP_015876776.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2924556 2924741 . + . ID=gene-NIV78_RS13785;Name=NIV78_RS13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13785 NZ_CP100136.1 Protein Homology CDS 2924556 2924741 . + 0 ID=cds-WP_017423671.1;Parent=gene-NIV78_RS13785;Dbxref=Genbank:WP_017423671.1;Name=WP_017423671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423671.1;locus_tag=NIV78_RS13785;product=hypothetical protein;protein_id=WP_017423671.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2924734 2925780 . - . ID=gene-NIV78_RS13790;Name=NIV78_RS13790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13790 NZ_CP100136.1 Protein Homology CDS 2924734 2925780 . - 0 ID=cds-WP_251107146.1;Parent=gene-NIV78_RS13790;Dbxref=Genbank:WP_251107146.1;Name=WP_251107146.1;Ontology_term=GO:0006813;gbkey=CDS;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699120.1;locus_tag=NIV78_RS13790;product=NAD-binding protein;protein_id=WP_251107146.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2925862 2926893 . + . ID=gene-NIV78_RS13795;Name=NIV78_RS13795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13795 NZ_CP100136.1 Protein Homology CDS 2925862 2926893 . + 0 ID=cds-WP_015876779.1;Parent=gene-NIV78_RS13795;Dbxref=Genbank:WP_015876779.1;Name=WP_015876779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413312.1;locus_tag=NIV78_RS13795;product=CDP-6-deoxy-delta-3%2C4-glucoseen reductase;protein_id=WP_015876779.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2927188 2928372 . + . ID=gene-NIV78_RS13800;Name=NIV78_RS13800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13800 NZ_CP100136.1 Protein Homology CDS 2927188 2928372 . + 0 ID=cds-WP_043225554.1;Parent=gene-NIV78_RS13800;Dbxref=Genbank:WP_043225554.1;Name=WP_043225554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522595.1;locus_tag=NIV78_RS13800;product=acetylornithine transaminase;protein_id=WP_043225554.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2928391 2928843 . + . ID=gene-NIV78_RS13805;Name=NIV78_RS13805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13805 NZ_CP100136.1 Protein Homology CDS 2928391 2928843 . + 0 ID=cds-WP_015876781.1;Parent=gene-NIV78_RS13805;Dbxref=Genbank:WP_015876781.1;Name=WP_015876781.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876781.1;locus_tag=NIV78_RS13805;product=GNAT family acetyltransferase;protein_id=WP_015876781.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2928976 2929692 . - . ID=gene-NIV78_RS13810;Name=NIV78_RS13810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13810 NZ_CP100136.1 Protein Homology CDS 2928976 2929692 . - 0 ID=cds-WP_015876782.1;Parent=gene-NIV78_RS13810;Dbxref=Genbank:WP_015876782.1;Name=WP_015876782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478054.1;locus_tag=NIV78_RS13810;product=ABC transporter ATP-binding protein;protein_id=WP_015876782.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2929692 2930465 . - . ID=gene-NIV78_RS13815;Name=NIV78_RS13815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13815 NZ_CP100136.1 Protein Homology CDS 2929692 2930465 . - 0 ID=cds-WP_015876783.1;Parent=gene-NIV78_RS13815;Dbxref=Genbank:WP_015876783.1;Name=WP_015876783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009911514.1;locus_tag=NIV78_RS13815;product=ABC transporter ATP-binding protein;protein_id=WP_015876783.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2930490 2931662 . - . ID=gene-NIV78_RS13820;Name=NIV78_RS13820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13820 NZ_CP100136.1 Protein Homology CDS 2930490 2931662 . - 0 ID=cds-WP_015876784.1;Parent=gene-NIV78_RS13820;Dbxref=Genbank:WP_015876784.1;Name=WP_015876784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478052.1;locus_tag=NIV78_RS13820;product=ABC transporter ATP-binding protein;protein_id=WP_015876784.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2931673 2932623 . - . ID=gene-NIV78_RS13825;Name=NIV78_RS13825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13825 NZ_CP100136.1 Protein Homology CDS 2931673 2932623 . - 0 ID=cds-WP_015876785.1;Parent=gene-NIV78_RS13825;Dbxref=Genbank:WP_015876785.1;Name=WP_015876785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885761.1;locus_tag=NIV78_RS13825;product=branched-chain amino acid ABC transporter permease;protein_id=WP_015876785.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2932834 2933481 . - . ID=gene-NIV78_RS13830;Name=NIV78_RS13830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13830 NZ_CP100136.1 GeneMarkS-2+ CDS 2932834 2933481 . - 0 ID=cds-WP_157384122.1;Parent=gene-NIV78_RS13830;Dbxref=Genbank:WP_157384122.1;Name=WP_157384122.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS13830;product=hypothetical protein;protein_id=WP_157384122.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2933647 2933790 . + . ID=gene-NIV78_RS13835;Name=NIV78_RS13835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13835 NZ_CP100136.1 GeneMarkS-2+ CDS 2933647 2933790 . + 0 ID=cds-WP_157384123.1;Parent=gene-NIV78_RS13835;Dbxref=Genbank:WP_157384123.1;Name=WP_157384123.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS13835;product=hypothetical protein;protein_id=WP_157384123.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2933887 2934867 . - . ID=gene-NIV78_RS13840;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=NIV78_RS13840 NZ_CP100136.1 Protein Homology CDS 2933887 2934867 . - 0 ID=cds-WP_015876786.1;Parent=gene-NIV78_RS13840;Dbxref=Genbank:WP_015876786.1;Name=WP_015876786.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004546427.1;locus_tag=NIV78_RS13840;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_015876786.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2934870 2935325 . - . ID=gene-NIV78_RS13845;Name=NIV78_RS13845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13845 NZ_CP100136.1 Protein Homology CDS 2934870 2935325 . - 0 ID=cds-WP_015876787.1;Parent=gene-NIV78_RS13845;Dbxref=Genbank:WP_015876787.1;Name=WP_015876787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892571.1;locus_tag=NIV78_RS13845;product=peptidylprolyl isomerase;protein_id=WP_015876787.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2935453 2936253 . + . ID=gene-NIV78_RS13850;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=NIV78_RS13850 NZ_CP100136.1 Protein Homology CDS 2935453 2936253 . + 0 ID=cds-WP_015876788.1;Parent=gene-NIV78_RS13850;Dbxref=Genbank:WP_015876788.1;Name=WP_015876788.1;Ontology_term=GO:0006281,GO:0003677;gbkey=CDS;gene=radC;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423112.1;locus_tag=NIV78_RS13850;product=DNA repair protein RadC;protein_id=WP_015876788.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2936581 2936814 . + . ID=gene-NIV78_RS13855;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=NIV78_RS13855 NZ_CP100136.1 Protein Homology CDS 2936581 2936814 . + 0 ID=cds-WP_004186391.1;Parent=gene-NIV78_RS13855;Dbxref=Genbank:WP_004186391.1;Name=WP_004186391.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rpmB;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007586227.1;locus_tag=NIV78_RS13855;product=50S ribosomal protein L28;protein_id=WP_004186391.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2936832 2936999 . + . ID=gene-NIV78_RS13860;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=NIV78_RS13860 NZ_CP100136.1 Protein Homology CDS 2936832 2936999 . + 0 ID=cds-WP_007586229.1;Parent=gene-NIV78_RS13860;Dbxref=Genbank:WP_007586229.1;Name=WP_007586229.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007180630.1;locus_tag=NIV78_RS13860;product=50S ribosomal protein L33;protein_id=WP_007586229.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2937196 2938776 . + . ID=gene-NIV78_RS13865;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=NIV78_RS13865 NZ_CP100136.1 Protein Homology CDS 2937196 2938776 . + 0 ID=cds-WP_015876789.1;Parent=gene-NIV78_RS13865;Dbxref=Genbank:WP_015876789.1;Name=WP_015876789.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423113.1;locus_tag=NIV78_RS13865;product=L-aspartate oxidase;protein_id=WP_015876789.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2938900 2939778 . - . ID=gene-NIV78_RS13870;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=NIV78_RS13870 NZ_CP100136.1 Protein Homology CDS 2938900 2939778 . - 0 ID=cds-WP_017922628.1;Parent=gene-NIV78_RS13870;Dbxref=Genbank:WP_017922628.1;Name=WP_017922628.1;Ontology_term=GO:0019363,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=pyridine nucleotide biosynthetic process|0019363||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851208.1;locus_tag=NIV78_RS13870;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_017922628.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2939775 2940902 . - . ID=gene-NIV78_RS13875;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=NIV78_RS13875 NZ_CP100136.1 Protein Homology CDS 2939775 2940902 . - 0 ID=cds-WP_017922627.1;Parent=gene-NIV78_RS13875;Dbxref=Genbank:WP_017922627.1;Name=WP_017922627.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329066.1;locus_tag=NIV78_RS13875;product=quinolinate synthase NadA;protein_id=WP_017922627.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2941012 2942208 . - . ID=gene-NIV78_RS13880;Name=NIV78_RS13880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13880 NZ_CP100136.1 Protein Homology CDS 2941012 2942208 . - 0 ID=cds-WP_017423114.1;Parent=gene-NIV78_RS13880;Dbxref=Genbank:WP_017423114.1;Name=WP_017423114.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012434118.1;locus_tag=NIV78_RS13880;product=acyl-CoA desaturase;protein_id=WP_017423114.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2942625 2944019 . - . ID=gene-NIV78_RS13885;Name=NIV78_RS13885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13885 NZ_CP100136.1 Protein Homology CDS 2942625 2944019 . - 0 ID=cds-WP_017922626.1;Parent=gene-NIV78_RS13885;Dbxref=Genbank:WP_017922626.1;Name=WP_017922626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876793.1;locus_tag=NIV78_RS13885;product=RsmB/NOP family class I SAM-dependent RNA methyltransferase;protein_id=WP_017922626.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2944016 2944675 . - . ID=gene-NIV78_RS13890;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=NIV78_RS13890 NZ_CP100136.1 Protein Homology CDS 2944016 2944675 . - 0 ID=cds-WP_015876794.1;Parent=gene-NIV78_RS13890;Dbxref=Genbank:WP_015876794.1;Name=WP_015876794.1;Ontology_term=GO:0009152,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876794.1;locus_tag=NIV78_RS13890;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_015876794.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2944799 2945779 . + . ID=gene-NIV78_RS13895;Name=NIV78_RS13895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13895 NZ_CP100136.1 Protein Homology CDS 2944799 2945779 . + 0 ID=cds-WP_026051325.1;Parent=gene-NIV78_RS13895;Dbxref=Genbank:WP_026051325.1;Name=WP_026051325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750061.1;locus_tag=NIV78_RS13895;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_026051325.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2945881 2948718 . + . ID=gene-NIV78_RS13900;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=NIV78_RS13900 NZ_CP100136.1 Protein Homology CDS 2945881 2948718 . + 0 ID=cds-WP_017922625.1;Parent=gene-NIV78_RS13900;Dbxref=Genbank:WP_017922625.1;Name=WP_017922625.1;Ontology_term=GO:0006428,GO:0004822,GO:0005737;gbkey=CDS;gene=ileS;go_component=cytoplasm|0005737||IEA;go_function=isoleucine-tRNA ligase activity|0004822||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352960.1;locus_tag=NIV78_RS13900;product=isoleucine--tRNA ligase;protein_id=WP_017922625.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2948721 2949221 . + . ID=gene-NIV78_RS13905;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=NIV78_RS13905 NZ_CP100136.1 Protein Homology CDS 2948721 2949221 . + 0 ID=cds-WP_015876797.1;Parent=gene-NIV78_RS13905;Dbxref=Genbank:WP_015876797.1;Name=WP_015876797.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005887;gbkey=CDS;gene=lspA;go_component=integral component of plasma membrane|0005887||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333949.1;locus_tag=NIV78_RS13905;product=signal peptidase II;protein_id=WP_015876797.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2949305 2950516 . + . ID=gene-NIV78_RS13910;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=NIV78_RS13910 NZ_CP100136.1 Protein Homology CDS 2949305 2950516 . + 0 ID=cds-WP_015876798.1;Parent=gene-NIV78_RS13910;Dbxref=Genbank:WP_015876798.1;Name=WP_015876798.1;Ontology_term=GO:0015937,GO:0015939,GO:0004632,GO:0004633;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate metabolic process|0015939||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851204.1;locus_tag=NIV78_RS13910;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_015876798.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2950600 2951046 . + . ID=gene-NIV78_RS13915;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=NIV78_RS13915 NZ_CP100136.1 Protein Homology CDS 2950600 2951046 . + 0 ID=cds-WP_015876799.1;Parent=gene-NIV78_RS13915;Dbxref=Genbank:WP_015876799.1;Name=WP_015876799.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876799.1;locus_tag=NIV78_RS13915;product=dUTP diphosphatase;protein_id=WP_015876799.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2951323 2953620 . - . ID=gene-NIV78_RS13920;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=NIV78_RS13920 NZ_CP100136.1 Protein Homology CDS 2951323 2953620 . - 0 ID=cds-WP_015876800.1;Parent=gene-NIV78_RS13920;Dbxref=Genbank:WP_015876800.1;Name=WP_015876800.1;Ontology_term=GO:0006508,GO:0043335,GO:0004176,GO:0009368;gbkey=CDS;gene=clpA;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA;go_process=proteolysis|0006508||IEA,protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546019.1;locus_tag=NIV78_RS13920;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_015876800.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2953617 2953931 . - . ID=gene-NIV78_RS13925;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=NIV78_RS13925 NZ_CP100136.1 Protein Homology CDS 2953617 2953931 . - 0 ID=cds-WP_015876801.1;Parent=gene-NIV78_RS13925;Dbxref=Genbank:WP_015876801.1;Name=WP_015876801.1;gbkey=CDS;gene=clpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008351199.1;locus_tag=NIV78_RS13925;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_015876801.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2954461 2954664 . + . ID=gene-NIV78_RS13930;Name=NIV78_RS13930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13930 NZ_CP100136.1 Protein Homology CDS 2954461 2954664 . + 0 ID=cds-WP_004196460.1;Parent=gene-NIV78_RS13930;Dbxref=Genbank:WP_004196460.1;Name=WP_004196460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016687461.1;locus_tag=NIV78_RS13930;product=cold-shock protein;protein_id=WP_004196460.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2954776 2956380 . - . ID=gene-NIV78_RS13935;Name=NIV78_RS13935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13935 NZ_CP100136.1 Protein Homology CDS 2954776 2956380 . - 0 ID=cds-WP_251107147.1;Parent=gene-NIV78_RS13935;Dbxref=Genbank:WP_251107147.1;Name=WP_251107147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004555962.1;locus_tag=NIV78_RS13935;product=multicopper oxidase domain-containing protein;protein_id=WP_251107147.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2956460 2956825 . - . ID=gene-NIV78_RS13940;Name=NIV78_RS13940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13940 NZ_CP100136.1 Protein Homology CDS 2956460 2956825 . - 0 ID=cds-WP_015876803.1;Parent=gene-NIV78_RS13940;Dbxref=Genbank:WP_015876803.1;Name=WP_015876803.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008919116.1;locus_tag=NIV78_RS13940;product=response regulator;protein_id=WP_015876803.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2956849 2957811 . - . ID=gene-NIV78_RS13945;Name=NIV78_RS13945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13945 NZ_CP100136.1 Protein Homology CDS 2956849 2957811 . - 0 ID=cds-WP_017924245.1;Parent=gene-NIV78_RS13945;Dbxref=Genbank:WP_017924245.1;Name=WP_017924245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876804.1;locus_tag=NIV78_RS13945;product=chemotaxis protein CheX;protein_id=WP_017924245.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2957847 2958383 . - . ID=gene-NIV78_RS13950;Name=NIV78_RS13950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13950 NZ_CP100136.1 Protein Homology CDS 2957847 2958383 . - 0 ID=cds-WP_017924246.1;Parent=gene-NIV78_RS13950;Dbxref=Genbank:WP_017924246.1;Name=WP_017924246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423721.1;locus_tag=NIV78_RS13950;product=hypothetical protein;protein_id=WP_017924246.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2958380 2959120 . - . ID=gene-NIV78_RS13955;Name=NIV78_RS13955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13955 NZ_CP100136.1 Protein Homology CDS 2958380 2959120 . - 0 ID=cds-WP_100556015.1;Parent=gene-NIV78_RS13955;Dbxref=Genbank:WP_100556015.1;Name=WP_100556015.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876806.1;locus_tag=NIV78_RS13955;product=methyl-accepting chemotaxis protein;protein_id=WP_100556015.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2959125 2961515 . - . ID=gene-NIV78_RS13960;Name=NIV78_RS13960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13960 NZ_CP100136.1 Protein Homology CDS 2959125 2961515 . - 0 ID=cds-WP_017923103.1;Parent=gene-NIV78_RS13960;Dbxref=Genbank:WP_017923103.1;Name=WP_017923103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876807.1;locus_tag=NIV78_RS13960;product=ATP-binding protein;protein_id=WP_017923103.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2961690 2962013 . - . ID=gene-NIV78_RS13965;Name=NIV78_RS13965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13965 NZ_CP100136.1 GeneMarkS-2+ CDS 2961690 2962013 . - 0 ID=cds-WP_157384127.1;Parent=gene-NIV78_RS13965;Dbxref=Genbank:WP_157384127.1;Name=WP_157384127.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS13965;product=hypothetical protein;protein_id=WP_157384127.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2962146 2962373 . + . ID=gene-NIV78_RS13970;Name=NIV78_RS13970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13970 NZ_CP100136.1 Protein Homology CDS 2962146 2962373 . + 0 ID=cds-WP_015876808.1;Parent=gene-NIV78_RS13970;Dbxref=Genbank:WP_015876808.1;Name=WP_015876808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478028.1;locus_tag=NIV78_RS13970;product=hypothetical protein;protein_id=WP_015876808.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2962585 2964813 . - . ID=gene-NIV78_RS13975;Name=NIV78_RS13975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13975 NZ_CP100136.1 Protein Homology CDS 2962585 2964813 . - 0 ID=cds-WP_017424869.1;Parent=gene-NIV78_RS13975;Dbxref=Genbank:WP_017424869.1;Name=WP_017424869.1;Ontology_term=GO:0006099,GO:0004450;gbkey=CDS;go_function=isocitrate dehydrogenase (NADP+) activity|0004450||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723497.1;locus_tag=NIV78_RS13975;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_017424869.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2964982 2966238 . - . ID=gene-NIV78_RS13980;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=NIV78_RS13980 NZ_CP100136.1 Protein Homology CDS 2964982 2966238 . - 0 ID=cds-WP_015876810.1;Parent=gene-NIV78_RS13980;Dbxref=Genbank:WP_015876810.1;Name=WP_015876810.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020069124.1;locus_tag=NIV78_RS13980;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_015876810.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2966449 2967027 . + . ID=gene-NIV78_RS13985;Name=NIV78_RS13985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13985 NZ_CP100136.1 Protein Homology CDS 2966449 2967027 . + 0 ID=cds-WP_017923104.1;Parent=gene-NIV78_RS13985;Dbxref=Genbank:WP_017923104.1;Name=WP_017923104.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876811.1;locus_tag=NIV78_RS13985;product=pseudouridine synthase;protein_id=WP_017923104.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2967287 2967487 . + . ID=gene-NIV78_RS13990;Name=NIV78_RS13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13990 NZ_CP100136.1 Protein Homology CDS 2967287 2967487 . + 0 ID=cds-WP_015876812.1;Parent=gene-NIV78_RS13990;Dbxref=Genbank:WP_015876812.1;Name=WP_015876812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398520.1;locus_tag=NIV78_RS13990;product=hypothetical protein;protein_id=WP_015876812.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2967672 2968181 . + . ID=gene-NIV78_RS13995;Name=NIV78_RS13995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS13995 NZ_CP100136.1 Protein Homology CDS 2967672 2968181 . + 0 ID=cds-WP_015876813.1;Parent=gene-NIV78_RS13995;Dbxref=Genbank:WP_015876813.1;Name=WP_015876813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004530837.1;locus_tag=NIV78_RS13995;product=DUF192 domain-containing protein;protein_id=WP_015876813.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2968589 2970700 . + . ID=gene-NIV78_RS14000;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=NIV78_RS14000 NZ_CP100136.1 Protein Homology CDS 2968589 2970700 . + 0 ID=cds-WP_015876814.1;Parent=gene-NIV78_RS14000;Dbxref=Genbank:WP_015876814.1;Name=WP_015876814.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329077.1;locus_tag=NIV78_RS14000;product=elongation factor G;protein_id=WP_015876814.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2970814 2972106 . - . ID=gene-NIV78_RS14005;Name=NIV78_RS14005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14005 NZ_CP100136.1 Protein Homology CDS 2970814 2972106 . - 0 ID=cds-WP_015876815.1;Parent=gene-NIV78_RS14005;Dbxref=Genbank:WP_015876815.1;Name=WP_015876815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699159.1;locus_tag=NIV78_RS14005;product=MFS transporter;protein_id=WP_015876815.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2972223 2972693 . - . ID=gene-NIV78_RS14010;Name=NIV78_RS14010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14010 NZ_CP100136.1 Protein Homology CDS 2972223 2972693 . - 0 ID=cds-WP_251107150.1;Parent=gene-NIV78_RS14010;Dbxref=Genbank:WP_251107150.1;Name=WP_251107150.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876816.1;locus_tag=NIV78_RS14010;product=MarR family transcriptional regulator;protein_id=WP_251107150.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2972836 2973876 . + . ID=gene-NIV78_RS14015;Name=NIV78_RS14015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14015 NZ_CP100136.1 Protein Homology CDS 2972836 2973876 . + 0 ID=cds-WP_015876817.1;Parent=gene-NIV78_RS14015;Dbxref=Genbank:WP_015876817.1;Name=WP_015876817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876817.1;locus_tag=NIV78_RS14015;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_015876817.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2973953 2974795 . - . ID=gene-NIV78_RS14020;Name=NIV78_RS14020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14020 NZ_CP100136.1 Protein Homology CDS 2973953 2974795 . - 0 ID=cds-WP_015876818.1;Parent=gene-NIV78_RS14020;Dbxref=Genbank:WP_015876818.1;Name=WP_015876818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186341.1;locus_tag=NIV78_RS14020;product=aldo/keto reductase;protein_id=WP_015876818.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2974952 2975698 . + . ID=gene-NIV78_RS14025;Name=NIV78_RS14025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14025 NZ_CP100136.1 Protein Homology CDS 2974952 2975698 . + 0 ID=cds-WP_015876819.1;Parent=gene-NIV78_RS14025;Dbxref=Genbank:WP_015876819.1;Name=WP_015876819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185897.1;locus_tag=NIV78_RS14025;product=GntR family transcriptional regulator;protein_id=WP_015876819.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2975840 2977273 . + . ID=gene-NIV78_RS14030;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=NIV78_RS14030 NZ_CP100136.1 Protein Homology CDS 2975840 2977273 . + 0 ID=cds-WP_015876820.1;Parent=gene-NIV78_RS14030;Dbxref=Genbank:WP_015876820.1;Name=WP_015876820.1;Ontology_term=GO:0055085,GO:0022857,GO:0016021;gbkey=CDS;gene=mdtD;go_component=integral component of membrane|0016021||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876820.1;locus_tag=NIV78_RS14030;product=multidrug transporter subunit MdtD;protein_id=WP_015876820.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2977528 2978781 . + . ID=gene-NIV78_RS14035;Name=NIV78_RS14035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14035 NZ_CP100136.1 Protein Homology CDS 2977528 2978781 . + 0 ID=cds-WP_026051499.1;Parent=gene-NIV78_RS14035;Dbxref=Genbank:WP_026051499.1;Name=WP_026051499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024793.1;locus_tag=NIV78_RS14035;product=EAL domain-containing protein;protein_id=WP_026051499.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2978825 2979868 . - . ID=gene-NIV78_RS14040;Name=NIV78_RS14040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14040 NZ_CP100136.1 Protein Homology CDS 2978825 2979868 . - 0 ID=cds-WP_257756984.1;Parent=gene-NIV78_RS14040;Dbxref=Genbank:WP_257756984.1;Name=WP_257756984.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876822.1;locus_tag=NIV78_RS14040;product=2-dehydropantoate 2-reductase;protein_id=WP_257756984.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2979875 2980402 . - . ID=gene-NIV78_RS14045;Name=NIV78_RS14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14045 NZ_CP100136.1 Protein Homology CDS 2979875 2980402 . - 0 ID=cds-WP_017423908.1;Parent=gene-NIV78_RS14045;Dbxref=Genbank:WP_017423908.1;Name=WP_017423908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876823.1;locus_tag=NIV78_RS14045;product=DUF962 domain-containing protein;protein_id=WP_017423908.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2980477 2981184 . + . ID=gene-NIV78_RS14050;Name=NIV78_RS14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14050 NZ_CP100136.1 Protein Homology CDS 2980477 2981184 . + 0 ID=cds-WP_015876824.1;Parent=gene-NIV78_RS14050;Dbxref=Genbank:WP_015876824.1;Name=WP_015876824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876824.1;locus_tag=NIV78_RS14050;product=Crp/Fnr family transcriptional regulator;protein_id=WP_015876824.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2981422 2982000 . - . ID=gene-NIV78_RS14055;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=NIV78_RS14055 NZ_CP100136.1 Protein Homology CDS 2981422 2982000 . - 0 ID=cds-WP_017923901.1;Parent=gene-NIV78_RS14055;Dbxref=Genbank:WP_017923901.1;Name=WP_017923901.1;gbkey=CDS;gene=sodB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024786.1;locus_tag=NIV78_RS14055;product=superoxide dismutase [Fe];protein_id=WP_017923901.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2982244 2983644 . - . ID=gene-NIV78_RS14060;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=NIV78_RS14060 NZ_CP100136.1 Protein Homology CDS 2982244 2983644 . - 0 ID=cds-WP_251107553.1;Parent=gene-NIV78_RS14060;Dbxref=Genbank:WP_251107553.1;Name=WP_251107553.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600975.1;locus_tag=NIV78_RS14060;product=exodeoxyribonuclease VII large subunit;protein_id=WP_251107553.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2984167 2985189 . + . ID=gene-NIV78_RS14065;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=NIV78_RS14065 NZ_CP100136.1 Protein Homology CDS 2984167 2985189 . + 0 ID=cds-WP_100555759.1;Parent=gene-NIV78_RS14065;Dbxref=Genbank:WP_100555759.1;Name=WP_100555759.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333983.1;locus_tag=NIV78_RS14065;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_100555759.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2985170 2985376 . + . ID=gene-NIV78_RS14070;Name=NIV78_RS14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14070 NZ_CP100136.1 Protein Homology CDS 2985170 2985376 . + 0 ID=cds-WP_015876828.1;Parent=gene-NIV78_RS14070;Dbxref=Genbank:WP_015876828.1;Name=WP_015876828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876828.1;locus_tag=NIV78_RS14070;product=Trm112 family protein;protein_id=WP_015876828.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2985532 2986323 . + . ID=gene-NIV78_RS14075;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=NIV78_RS14075 NZ_CP100136.1 Protein Homology CDS 2985532 2986323 . + 0 ID=cds-WP_251107152.1;Parent=gene-NIV78_RS14075;Dbxref=Genbank:WP_251107152.1;Name=WP_251107152.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010102035.1;locus_tag=NIV78_RS14075;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_251107152.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2986529 2987191 . + . ID=gene-NIV78_RS14080;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=NIV78_RS14080 NZ_CP100136.1 Protein Homology CDS 2986529 2987191 . + 0 ID=cds-WP_015876830.1;Parent=gene-NIV78_RS14080;Dbxref=Genbank:WP_015876830.1;Name=WP_015876830.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=adenylate kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398497.1;locus_tag=NIV78_RS14080;product=adenylate kinase;protein_id=WP_015876830.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2987363 2988121 . + . ID=gene-NIV78_RS14085;Name=NIV78_RS14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14085 NZ_CP100136.1 Protein Homology CDS 2987363 2988121 . + 0 ID=cds-WP_017923490.1;Parent=gene-NIV78_RS14085;Dbxref=Genbank:WP_017923490.1;Name=WP_017923490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189909.1;locus_tag=NIV78_RS14085;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_017923490.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2988214 2989053 . - . ID=gene-NIV78_RS14090;Name=NIV78_RS14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14090 NZ_CP100136.1 Protein Homology CDS 2988214 2989053 . - 0 ID=cds-WP_015876832.1;Parent=gene-NIV78_RS14090;Dbxref=Genbank:WP_015876832.1;Name=WP_015876832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492832.1;locus_tag=NIV78_RS14090;product=SirB1 family protein;protein_id=WP_015876832.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2989062 2990612 . - . ID=gene-NIV78_RS14095;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=NIV78_RS14095 NZ_CP100136.1 Protein Homology CDS 2989062 2990612 . - 0 ID=cds-WP_017923492.1;Parent=gene-NIV78_RS14095;Dbxref=Genbank:WP_017923492.1;Name=WP_017923492.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750940.1;locus_tag=NIV78_RS14095;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_017923492.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2990940 2991215 . + . ID=gene-NIV78_RS14100;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=NIV78_RS14100 NZ_CP100136.1 Protein Homology CDS 2990940 2991215 . + 0 ID=cds-WP_015876834.1;Parent=gene-NIV78_RS14100;Dbxref=Genbank:WP_015876834.1;Name=WP_015876834.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsT;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007180577.1;locus_tag=NIV78_RS14100;product=30S ribosomal protein S20;protein_id=WP_015876834.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2991400 2991717 . - . ID=gene-NIV78_RS14105;Name=NIV78_RS14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14105 NZ_CP100136.1 Protein Homology CDS 2991400 2991717 . - 0 ID=cds-WP_015876835.1;Parent=gene-NIV78_RS14105;Dbxref=Genbank:WP_015876835.1;Name=WP_015876835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876835.1;locus_tag=NIV78_RS14105;product=DUF3579 domain-containing protein;protein_id=WP_015876835.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2992170 2993099 . + . ID=gene-NIV78_RS14110;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=NIV78_RS14110 NZ_CP100136.1 Protein Homology CDS 2992170 2993099 . + 0 ID=cds-WP_015876836.1;Parent=gene-NIV78_RS14110;Dbxref=Genbank:WP_015876836.1;Name=WP_015876836.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190177.1;locus_tag=NIV78_RS14110;product=ornithine carbamoyltransferase;protein_id=WP_015876836.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2993188 2994276 . - . ID=gene-NIV78_RS14115;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=NIV78_RS14115 NZ_CP100136.1 Protein Homology CDS 2993188 2994276 . - 0 ID=cds-WP_232734512.1;Parent=gene-NIV78_RS14115;Dbxref=Genbank:WP_232734512.1;Name=WP_232734512.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876837.1;locus_tag=NIV78_RS14115;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_232734512.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2994463 2994948 . + . ID=gene-NIV78_RS14120;Name=NIV78_RS14120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14120 NZ_CP100136.1 Protein Homology CDS 2994463 2994948 . + 0 ID=cds-WP_017924325.1;Parent=gene-NIV78_RS14120;Dbxref=Genbank:WP_017924325.1;Name=WP_017924325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189237.1;locus_tag=NIV78_RS14120;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_017924325.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2994995 2995621 . - . ID=gene-NIV78_RS14125;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=NIV78_RS14125 NZ_CP100136.1 Protein Homology CDS 2994995 2995621 . - 0 ID=cds-WP_015876839.1;Parent=gene-NIV78_RS14125;Dbxref=Genbank:WP_015876839.1;Name=WP_015876839.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424904.1;locus_tag=NIV78_RS14125;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_015876839.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2995726 2996217 . - . ID=gene-NIV78_RS14130;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=NIV78_RS14130 NZ_CP100136.1 Protein Homology CDS 2995726 2996217 . - 0 ID=cds-WP_015876840.1;Parent=gene-NIV78_RS14130;Dbxref=Genbank:WP_015876840.1;Name=WP_015876840.1;Ontology_term=GO:0043039,GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA editing activity|0002161||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189587.1;locus_tag=NIV78_RS14130;product=Cys-tRNA(Pro) deacylase;protein_id=WP_015876840.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2996359 2997930 . + . ID=gene-NIV78_RS14135;Name=NIV78_RS14135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14135 NZ_CP100136.1 Protein Homology CDS 2996359 2997930 . + 0 ID=cds-WP_015876841.1;Parent=gene-NIV78_RS14135;Dbxref=Genbank:WP_015876841.1;Name=WP_015876841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699190.1;locus_tag=NIV78_RS14135;product=AMP-binding protein;protein_id=WP_015876841.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2997990 2999015 . - . ID=gene-NIV78_RS14140;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=NIV78_RS14140 NZ_CP100136.1 Protein Homology CDS 2997990 2999015 . - 0 ID=cds-WP_257757403.1;Parent=gene-NIV78_RS14140;Dbxref=Genbank:WP_257757403.1;Name=WP_257757403.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876842.1;locus_tag=NIV78_RS14140;product=site-specific tyrosine recombinase XerD;protein_id=WP_257757403.1;transl_table=11 NZ_CP100136.1 RefSeq gene 2999261 3000478 . - . ID=gene-NIV78_RS14145;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=NIV78_RS14145 NZ_CP100136.1 Protein Homology CDS 2999261 3000478 . - 0 ID=cds-WP_015876843.1;Parent=gene-NIV78_RS14145;Dbxref=Genbank:WP_015876843.1;Name=WP_015876843.1;Ontology_term=GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189719.1;locus_tag=NIV78_RS14145;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_015876843.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3000496 3001050 . + . ID=gene-NIV78_RS14150;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=NIV78_RS14150 NZ_CP100136.1 Protein Homology CDS 3000496 3001050 . + 0 ID=cds-WP_017923672.1;Parent=gene-NIV78_RS14150;Dbxref=Genbank:WP_017923672.1;Name=WP_017923672.1;Ontology_term=GO:0006400,GO:0016887,GO:0005737;gbkey=CDS;gene=tsaE;go_component=cytoplasm|0005737||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602338.1;locus_tag=NIV78_RS14150;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_017923672.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3001032 3002549 . + . ID=gene-NIV78_RS14155;Name=NIV78_RS14155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14155 NZ_CP100136.1 Protein Homology CDS 3001032 3002549 . + 0 ID=cds-WP_017923673.1;Parent=gene-NIV78_RS14155;Dbxref=Genbank:WP_017923673.1;Name=WP_017923673.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885826.1;locus_tag=NIV78_RS14155;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_017923673.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3002595 3003467 . - . ID=gene-NIV78_RS14160;Name=NIV78_RS14160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14160 NZ_CP100136.1 Protein Homology CDS 3002595 3003467 . - 0 ID=cds-WP_026051731.1;Parent=gene-NIV78_RS14160;Dbxref=Genbank:WP_026051731.1;Name=WP_026051731.1;Ontology_term=GO:0016020,GO:0016021;gbkey=CDS;go_component=membrane|0016020||IEA,integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896226.1;locus_tag=NIV78_RS14160;product=EamA family transporter;protein_id=WP_026051731.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3003606 3004487 . + . ID=gene-NIV78_RS14165;Name=NIV78_RS14165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14165 NZ_CP100136.1 Protein Homology CDS 3003606 3004487 . + 0 ID=cds-WP_017424977.1;Parent=gene-NIV78_RS14165;Dbxref=Genbank:WP_017424977.1;Name=WP_017424977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009980149.1;locus_tag=NIV78_RS14165;product=pirin family protein;protein_id=WP_017424977.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3004589 3005437 . + . ID=gene-NIV78_RS14170;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=NIV78_RS14170 NZ_CP100136.1 Protein Homology CDS 3004589 3005437 . + 0 ID=cds-WP_015876848.1;Parent=gene-NIV78_RS14170;Dbxref=Genbank:WP_015876848.1;Name=WP_015876848.1;Ontology_term=GO:0015036,GO:0005737;gbkey=CDS;gene=trxA;go_component=cytoplasm|0005737||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876848.1;locus_tag=NIV78_RS14170;product=thioredoxin;protein_id=WP_015876848.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3005462 3006322 . - . ID=gene-NIV78_RS14175;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=NIV78_RS14175 NZ_CP100136.1 Protein Homology CDS 3005462 3006322 . - 0 ID=cds-WP_017923884.1;Parent=gene-NIV78_RS14175;Dbxref=Genbank:WP_017923884.1;Name=WP_017923884.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601551.1;locus_tag=NIV78_RS14175;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_017923884.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3006468 3007112 . + . ID=gene-NIV78_RS14180;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=NIV78_RS14180 NZ_CP100136.1 Protein Homology CDS 3006468 3007112 . + 0 ID=cds-WP_026051732.1;Parent=gene-NIV78_RS14180;Dbxref=Genbank:WP_026051732.1;Name=WP_026051732.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine-phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011489690.1;locus_tag=NIV78_RS14180;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_026051732.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3007263 3008483 . + . ID=gene-NIV78_RS14185;Name=NIV78_RS14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14185 NZ_CP100136.1 Protein Homology CDS 3007263 3008483 . + 0 ID=cds-WP_015876851.1;Parent=gene-NIV78_RS14185;Dbxref=Genbank:WP_015876851.1;Name=WP_015876851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602204.1;locus_tag=NIV78_RS14185;product=cyclopropane-fatty-acyl-phospholipid synthase family protein;protein_id=WP_015876851.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3008514 3009860 . + . ID=gene-NIV78_RS14190;Name=NIV78_RS14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14190 NZ_CP100136.1 Protein Homology CDS 3008514 3009860 . + 0 ID=cds-WP_015876852.1;Parent=gene-NIV78_RS14190;Dbxref=Genbank:WP_015876852.1;Name=WP_015876852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416332.1;locus_tag=NIV78_RS14190;product=DUF72 domain-containing protein;protein_id=WP_015876852.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3009972 3010526 . - . ID=gene-NIV78_RS14195;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=NIV78_RS14195 NZ_CP100136.1 Protein Homology CDS 3009972 3010526 . - 0 ID=cds-WP_017425095.1;Parent=gene-NIV78_RS14195;Dbxref=Genbank:WP_017425095.1;Name=WP_017425095.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425095.1;locus_tag=NIV78_RS14195;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_017425095.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3010958 3011470 . + . ID=gene-NIV78_RS14200;Name=NIV78_RS14200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14200 NZ_CP100136.1 Protein Homology CDS 3010958 3011470 . + 0 ID=cds-WP_015876854.1;Parent=gene-NIV78_RS14200;Dbxref=Genbank:WP_015876854.1;Name=WP_015876854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876854.1;locus_tag=NIV78_RS14200;product=flavin reductase family protein;protein_id=WP_015876854.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3011457 3011957 . - . ID=gene-NIV78_RS14205;Name=NIV78_RS14205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14205 NZ_CP100136.1 Protein Homology CDS 3011457 3011957 . - 0 ID=cds-WP_015876855.1;Parent=gene-NIV78_RS14205;Dbxref=Genbank:WP_015876855.1;Name=WP_015876855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699205.1;locus_tag=NIV78_RS14205;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_015876855.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3012089 3012733 . + . ID=gene-NIV78_RS14210;Name=kynB;gbkey=Gene;gene=kynB;gene_biotype=protein_coding;locus_tag=NIV78_RS14210 NZ_CP100136.1 Protein Homology CDS 3012089 3012733 . + 0 ID=cds-WP_017923933.1;Parent=gene-NIV78_RS14210;Dbxref=Genbank:WP_017923933.1;Name=WP_017923933.1;Ontology_term=GO:0019441,GO:0004061;gbkey=CDS;gene=kynB;go_function=arylformamidase activity|0004061||IEA;go_process=tryptophan catabolic process to kynurenine|0019441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425093.1;locus_tag=NIV78_RS14210;product=arylformamidase;protein_id=WP_017923933.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3012851 3014101 . + . ID=gene-NIV78_RS14215;Name=kynU;gbkey=Gene;gene=kynU;gene_biotype=protein_coding;locus_tag=NIV78_RS14215 NZ_CP100136.1 Protein Homology CDS 3012851 3014101 . + 0 ID=cds-WP_017924316.1;Parent=gene-NIV78_RS14215;Dbxref=Genbank:WP_017924316.1;Name=WP_017924316.1;Ontology_term=GO:0019441,GO:0030429;gbkey=CDS;gene=kynU;go_function=kynureninase activity|0030429||IEA;go_process=tryptophan catabolic process to kynurenine|0019441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004550795.1;locus_tag=NIV78_RS14215;product=kynureninase;protein_id=WP_017924316.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3014168 3015073 . + . ID=gene-NIV78_RS14220;Name=kynA;gbkey=Gene;gene=kynA;gene_biotype=protein_coding;locus_tag=NIV78_RS14220 NZ_CP100136.1 Protein Homology CDS 3014168 3015073 . + 0 ID=cds-WP_017924315.1;Parent=gene-NIV78_RS14220;Dbxref=Genbank:WP_017924315.1;Name=WP_017924315.1;Ontology_term=GO:0019441,GO:0004833;gbkey=CDS;gene=kynA;go_function=tryptophan 2%2C3-dioxygenase activity|0004833||IEA;go_process=tryptophan catabolic process to kynurenine|0019441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876858.1;locus_tag=NIV78_RS14220;product=tryptophan 2%2C3-dioxygenase;protein_id=WP_017924315.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 3015158 3015978 . - . ID=gene-NIV78_RS14225;Name=NIV78_RS14225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS14225;pseudo=true NZ_CP100136.1 Protein Homology CDS 3015158 3015978 . - 0 ID=cds-NIV78_RS14225;Parent=gene-NIV78_RS14225;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004537934.1;locus_tag=NIV78_RS14225;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 3016271 3017665 . + . ID=gene-NIV78_RS14230;Name=NIV78_RS14230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14230 NZ_CP100136.1 Protein Homology CDS 3016271 3017665 . + 0 ID=cds-WP_251107154.1;Parent=gene-NIV78_RS14230;Dbxref=Genbank:WP_251107154.1;Name=WP_251107154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876860.1;locus_tag=NIV78_RS14230;product=mannitol dehydrogenase family protein;protein_id=WP_251107154.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3017785 3019266 . + . ID=gene-NIV78_RS14235;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=NIV78_RS14235 NZ_CP100136.1 Protein Homology CDS 3017785 3019266 . + 0 ID=cds-WP_015876861.1;Parent=gene-NIV78_RS14235;Dbxref=Genbank:WP_015876861.1;Name=WP_015876861.1;Ontology_term=GO:0005997,GO:0042732,GO:0004856,GO:0005515;gbkey=CDS;gene=xylB;go_function=xylulokinase activity|0004856||IEA,protein binding|0005515||IEA;go_process=xylulose metabolic process|0005997||IEA,D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334025.1;locus_tag=NIV78_RS14235;product=xylulokinase;protein_id=WP_015876861.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3019325 3020272 . + . ID=gene-NIV78_RS14240;Name=NIV78_RS14240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14240 NZ_CP100136.1 Protein Homology CDS 3019325 3020272 . + 0 ID=cds-WP_015876862.1;Parent=gene-NIV78_RS14240;Dbxref=Genbank:WP_015876862.1;Name=WP_015876862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009903210.1;locus_tag=NIV78_RS14240;product=sugar-binding transcriptional regulator;protein_id=WP_015876862.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3020338 3021453 . - . ID=gene-NIV78_RS14245;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=NIV78_RS14245 NZ_CP100136.1 Protein Homology CDS 3020338 3021453 . - 0 ID=cds-WP_015876863.1;Parent=gene-NIV78_RS14245;Dbxref=Genbank:WP_015876863.1;Name=WP_015876863.1;Ontology_term=GO:0005524,GO:0140359;gbkey=CDS;gene=ugpC;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199035.1;locus_tag=NIV78_RS14245;product=sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC;protein_id=WP_015876863.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3021537 3022256 . - . ID=gene-NIV78_RS14250;Name=NIV78_RS14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14250 NZ_CP100136.1 Protein Homology CDS 3021537 3022256 . - 0 ID=cds-WP_015876864.1;Parent=gene-NIV78_RS14250;Dbxref=Genbank:WP_015876864.1;Name=WP_015876864.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876864.1;locus_tag=NIV78_RS14250;product=HAD-IA family hydrolase;protein_id=WP_015876864.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3022253 3023110 . - . ID=gene-NIV78_RS14255;Name=NIV78_RS14255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14255 NZ_CP100136.1 Protein Homology CDS 3022253 3023110 . - 0 ID=cds-WP_015876865.1;Parent=gene-NIV78_RS14255;Dbxref=Genbank:WP_015876865.1;Name=WP_015876865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189655.1;locus_tag=NIV78_RS14255;product=carbohydrate ABC transporter permease;protein_id=WP_015876865.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3023107 3024051 . - . ID=gene-NIV78_RS14260;Name=NIV78_RS14260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14260 NZ_CP100136.1 Protein Homology CDS 3023107 3024051 . - 0 ID=cds-WP_015876866.1;Parent=gene-NIV78_RS14260;Dbxref=Genbank:WP_015876866.1;Name=WP_015876866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699216.1;locus_tag=NIV78_RS14260;product=sugar ABC transporter permease;protein_id=WP_015876866.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3024159 3025487 . - . ID=gene-NIV78_RS14265;Name=NIV78_RS14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14265 NZ_CP100136.1 Protein Homology CDS 3024159 3025487 . - 0 ID=cds-WP_017923833.1;Parent=gene-NIV78_RS14265;Dbxref=Genbank:WP_017923833.1;Name=WP_017923833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601633.1;locus_tag=NIV78_RS14265;product=sugar ABC transporter substrate-binding protein;protein_id=WP_017923833.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3025567 3026973 . - . ID=gene-NIV78_RS14270;Name=NIV78_RS14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14270 NZ_CP100136.1 Protein Homology CDS 3025567 3026973 . - 0 ID=cds-WP_251107155.1;Parent=gene-NIV78_RS14270;Dbxref=Genbank:WP_251107155.1;Name=WP_251107155.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876868.1;locus_tag=NIV78_RS14270;product=D-tagatose-bisphosphate aldolase%2C class II%2C non-catalytic subunit;protein_id=WP_251107155.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3026961 3027920 . - . ID=gene-NIV78_RS14275;Name=NIV78_RS14275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14275 NZ_CP100136.1 Protein Homology CDS 3026961 3027920 . - 0 ID=cds-WP_100555765.1;Parent=gene-NIV78_RS14275;Dbxref=Genbank:WP_100555765.1;Name=WP_100555765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522660.1;locus_tag=NIV78_RS14275;product=sugar kinase;protein_id=WP_100555765.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3027925 3028701 . - . ID=gene-NIV78_RS14280;Name=NIV78_RS14280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14280 NZ_CP100136.1 Protein Homology CDS 3027925 3028701 . - 0 ID=cds-WP_015876870.1;Parent=gene-NIV78_RS14280;Dbxref=Genbank:WP_015876870.1;Name=WP_015876870.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876870.1;locus_tag=NIV78_RS14280;product=L-iditol 2-dehydrogenase;protein_id=WP_015876870.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3028978 3029448 . + . ID=gene-NIV78_RS14285;Name=NIV78_RS14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14285 NZ_CP100136.1 Protein Homology CDS 3028978 3029448 . + 0 ID=cds-WP_015876871.1;Parent=gene-NIV78_RS14285;Dbxref=Genbank:WP_015876871.1;Name=WP_015876871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876871.1;locus_tag=NIV78_RS14285;product=transcriptional repressor;protein_id=WP_015876871.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3029509 3030441 . + . ID=gene-NIV78_RS14290;Name=NIV78_RS14290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14290 NZ_CP100136.1 Protein Homology CDS 3029509 3030441 . + 0 ID=cds-WP_017923382.1;Parent=gene-NIV78_RS14290;Dbxref=Genbank:WP_017923382.1;Name=WP_017923382.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876872.1;locus_tag=NIV78_RS14290;product=zinc ABC transporter substrate-binding protein;protein_id=WP_017923382.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3030446 3031330 . + . ID=gene-NIV78_RS14295;Name=NIV78_RS14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14295 NZ_CP100136.1 Protein Homology CDS 3030446 3031330 . + 0 ID=cds-WP_015876873.1;Parent=gene-NIV78_RS14295;Dbxref=Genbank:WP_015876873.1;Name=WP_015876873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876873.1;locus_tag=NIV78_RS14295;product=ABC transporter ATP-binding protein;protein_id=WP_015876873.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3031338 3032141 . + . ID=gene-NIV78_RS14300;Name=NIV78_RS14300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14300 NZ_CP100136.1 Protein Homology CDS 3031338 3032141 . + 0 ID=cds-WP_017423843.1;Parent=gene-NIV78_RS14300;Dbxref=Genbank:WP_017423843.1;Name=WP_017423843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423843.1;locus_tag=NIV78_RS14300;product=metal ABC transporter permease;protein_id=WP_017423843.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3032264 3033118 . - . ID=gene-NIV78_RS14305;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=NIV78_RS14305 NZ_CP100136.1 Protein Homology CDS 3032264 3033118 . - 0 ID=cds-WP_015876875.1;Parent=gene-NIV78_RS14305;Dbxref=Genbank:WP_015876875.1;Name=WP_015876875.1;Ontology_term=GO:0046292,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde metabolic process|0046292||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876875.1;locus_tag=NIV78_RS14305;product=S-formylglutathione hydrolase;protein_id=WP_015876875.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3033135 3034241 . - . ID=gene-NIV78_RS14310;Name=NIV78_RS14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14310 NZ_CP100136.1 Protein Homology CDS 3033135 3034241 . - 0 ID=cds-WP_015876876.1;Parent=gene-NIV78_RS14310;Dbxref=Genbank:WP_015876876.1;Name=WP_015876876.1;Ontology_term=GO:0006113,GO:0009404,GO:0004024,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase activity%2C zinc-dependent|0004024||IEA,S-(hydroxymethyl)glutathione dehydrogenase activity|0051903||IEA;go_process=fermentation|0006113||IEA,toxin metabolic process|0009404||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019451408.1;locus_tag=NIV78_RS14310;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WP_015876876.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3034787 3036160 . + . ID=gene-NIV78_RS14315;Name=NIV78_RS14315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14315 NZ_CP100136.1 Protein Homology CDS 3034787 3036160 . + 0 ID=cds-WP_015876877.1;Parent=gene-NIV78_RS14315;Dbxref=Genbank:WP_015876877.1;Name=WP_015876877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004530867.1;locus_tag=NIV78_RS14315;product=purine permease;protein_id=WP_015876877.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3036330 3037847 . - . ID=gene-NIV78_RS14320;Name=NIV78_RS14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14320 NZ_CP100136.1 Protein Homology CDS 3036330 3037847 . - 0 ID=cds-WP_017425102.1;Parent=gene-NIV78_RS14320;Dbxref=Genbank:WP_017425102.1;Name=WP_017425102.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876878.1;locus_tag=NIV78_RS14320;product=efflux transporter outer membrane subunit;protein_id=WP_017425102.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3037850 3041041 . - . ID=gene-NIV78_RS14325;Name=NIV78_RS14325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14325 NZ_CP100136.1 Protein Homology CDS 3037850 3041041 . - 0 ID=cds-WP_017923355.1;Parent=gene-NIV78_RS14325;Dbxref=Genbank:WP_017923355.1;Name=WP_017923355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398428.1;locus_tag=NIV78_RS14325;product=efflux RND transporter permease subunit;protein_id=WP_017923355.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3041060 3042355 . - . ID=gene-NIV78_RS14330;Name=NIV78_RS14330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14330 NZ_CP100136.1 Protein Homology CDS 3041060 3042355 . - 0 ID=cds-WP_015876880.1;Parent=gene-NIV78_RS14330;Dbxref=Genbank:WP_015876880.1;Name=WP_015876880.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876880.1;locus_tag=NIV78_RS14330;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_015876880.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3042782 3043426 . + . ID=gene-NIV78_RS14335;Name=NIV78_RS14335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14335 NZ_CP100136.1 Protein Homology CDS 3042782 3043426 . + 0 ID=cds-WP_015876881.1;Parent=gene-NIV78_RS14335;Dbxref=Genbank:WP_015876881.1;Name=WP_015876881.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876881.1;locus_tag=NIV78_RS14335;product=TetR family transcriptional regulator;protein_id=WP_015876881.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3043514 3044230 . - . ID=gene-NIV78_RS14340;Name=NIV78_RS14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14340 NZ_CP100136.1 Protein Homology CDS 3043514 3044230 . - 0 ID=cds-WP_015876882.1;Parent=gene-NIV78_RS14340;Dbxref=Genbank:WP_015876882.1;Name=WP_015876882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004554577.1;locus_tag=NIV78_RS14340;product=SRPBCC domain-containing protein;protein_id=WP_015876882.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3044402 3044830 . - . ID=gene-NIV78_RS14345;Name=NIV78_RS14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14345 NZ_CP100136.1 Protein Homology CDS 3044402 3044830 . - 0 ID=cds-WP_015876883.1;Parent=gene-NIV78_RS14345;Dbxref=Genbank:WP_015876883.1;Name=WP_015876883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526225.1;locus_tag=NIV78_RS14345;product=carboxypeptidase regulatory-like domain-containing protein;protein_id=WP_015876883.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3044982 3046472 . - . ID=gene-NIV78_RS14350;Name=NIV78_RS14350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14350 NZ_CP100136.1 Protein Homology CDS 3044982 3046472 . - 0 ID=cds-WP_015876884.1;Parent=gene-NIV78_RS14350;Dbxref=Genbank:WP_015876884.1;Name=WP_015876884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398419.1;locus_tag=NIV78_RS14350;product=DegQ family serine endoprotease;protein_id=WP_015876884.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3046583 3047902 . - . ID=gene-NIV78_RS14355;Name=NIV78_RS14355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14355 NZ_CP100136.1 Protein Homology CDS 3046583 3047902 . - 0 ID=cds-WP_015876885.1;Parent=gene-NIV78_RS14355;Dbxref=Genbank:WP_015876885.1;Name=WP_015876885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876885.1;locus_tag=NIV78_RS14355;product=ATP-binding protein;protein_id=WP_015876885.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3047906 3048568 . - . ID=gene-NIV78_RS14360;Name=NIV78_RS14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14360 NZ_CP100136.1 Protein Homology CDS 3047906 3048568 . - 0 ID=cds-WP_085962404.1;Parent=gene-NIV78_RS14360;Dbxref=Genbank:WP_085962404.1;Name=WP_085962404.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189255.1;locus_tag=NIV78_RS14360;product=response regulator;protein_id=WP_085962404.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3048712 3050268 . + . ID=gene-NIV78_RS14365;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=NIV78_RS14365 NZ_CP100136.1 Protein Homology CDS 3048712 3050268 . + 0 ID=cds-WP_045678847.1;Parent=gene-NIV78_RS14365;Dbxref=Genbank:WP_045678847.1;Name=WP_045678847.1;Ontology_term=GO:0009252,GO:0004175,GO:0009002;gbkey=CDS;gene=dacB;go_function=endopeptidase activity|0004175||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492851.1;locus_tag=NIV78_RS14365;product=D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase;protein_id=WP_045678847.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3050453 3051418 . + . ID=gene-NIV78_RS14370;Name=NIV78_RS14370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14370 NZ_CP100136.1 Protein Homology CDS 3050453 3051418 . + 0 ID=cds-WP_015876888.1;Parent=gene-NIV78_RS14370;Dbxref=Genbank:WP_015876888.1;Name=WP_015876888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876888.1;locus_tag=NIV78_RS14370;product=sterol desaturase family protein;protein_id=WP_015876888.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3051462 3052604 . + . ID=gene-NIV78_RS14375;Name=NIV78_RS14375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14375 NZ_CP100136.1 Protein Homology CDS 3051462 3052604 . + 0 ID=cds-WP_015876889.1;Parent=gene-NIV78_RS14375;Dbxref=Genbank:WP_015876889.1;Name=WP_015876889.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876889.1;locus_tag=NIV78_RS14375;product=SGNH/GDSL hydrolase family protein;protein_id=WP_015876889.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3052728 3053807 . - . ID=gene-NIV78_RS14380;Name=NIV78_RS14380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14380 NZ_CP100136.1 Protein Homology CDS 3052728 3053807 . - 0 ID=cds-WP_015876890.1;Parent=gene-NIV78_RS14380;Dbxref=Genbank:WP_015876890.1;Name=WP_015876890.1;Ontology_term=GO:0006400,GO:0061710;gbkey=CDS;go_function=L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013589511.1;locus_tag=NIV78_RS14380;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_015876890.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3053821 3055014 . - . ID=gene-NIV78_RS14385;Name=NIV78_RS14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14385 NZ_CP100136.1 Protein Homology CDS 3053821 3055014 . - 0 ID=cds-WP_257756987.1;Parent=gene-NIV78_RS14385;Dbxref=Genbank:WP_257756987.1;Name=WP_257756987.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190104.1;locus_tag=NIV78_RS14385;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_257756987.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3055080 3055598 . - . ID=gene-NIV78_RS14390;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=NIV78_RS14390 NZ_CP100136.1 Protein Homology CDS 3055080 3055598 . - 0 ID=cds-WP_017423647.1;Parent=gene-NIV78_RS14390;Dbxref=Genbank:WP_017423647.1;Name=WP_017423647.1;Ontology_term=GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007581425.1;locus_tag=NIV78_RS14390;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_017423647.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3055638 3056528 . - . ID=gene-NIV78_RS14395;Name=NIV78_RS14395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14395 NZ_CP100136.1 Protein Homology CDS 3055638 3056528 . - 0 ID=cds-WP_017423646.1;Parent=gene-NIV78_RS14395;Dbxref=Genbank:WP_017423646.1;Name=WP_017423646.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876893.1;locus_tag=NIV78_RS14395;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_017423646.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3056653 3057717 . - . ID=gene-NIV78_RS14400;Name=fba;gbkey=Gene;gene=fba;gene_biotype=protein_coding;locus_tag=NIV78_RS14400 NZ_CP100136.1 Protein Homology CDS 3056653 3057717 . - 0 ID=cds-WP_015876894.1;Parent=gene-NIV78_RS14400;Dbxref=Genbank:WP_015876894.1;Name=WP_015876894.1;Note=catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle%2C glycolysis%2C and/or gluconeogenesis;Ontology_term=GO:0006096,GO:0004332;gbkey=CDS;gene=fba;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013589515.1;locus_tag=NIV78_RS14400;product=fructose-bisphosphate aldolase class II;protein_id=WP_015876894.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3057988 3059424 . - . ID=gene-NIV78_RS14405;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=NIV78_RS14405 NZ_CP100136.1 Protein Homology CDS 3057988 3059424 . - 0 ID=cds-WP_015876895.1;Parent=gene-NIV78_RS14405;Dbxref=Genbank:WP_015876895.1;Name=WP_015876895.1;Ontology_term=GO:0006096,GO:0004743,GO:0005737;gbkey=CDS;gene=pyk;go_component=cytoplasm|0005737||IEA;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188973.1;locus_tag=NIV78_RS14405;product=pyruvate kinase;protein_id=WP_015876895.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3059681 3060877 . - . ID=gene-NIV78_RS14410;Name=NIV78_RS14410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14410 NZ_CP100136.1 Protein Homology CDS 3059681 3060877 . - 0 ID=cds-WP_015876896.1;Parent=gene-NIV78_RS14410;Dbxref=Genbank:WP_015876896.1;Name=WP_015876896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699247.1;locus_tag=NIV78_RS14410;product=phosphoglycerate kinase;protein_id=WP_015876896.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3061108 3061431 . - . ID=gene-NIV78_RS14415;Name=NIV78_RS14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14415 NZ_CP100136.1 Protein Homology CDS 3061108 3061431 . - 0 ID=cds-WP_015876897.1;Parent=gene-NIV78_RS14415;Dbxref=Genbank:WP_015876897.1;Name=WP_015876897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763506.1;locus_tag=NIV78_RS14415;product=AzlD domain-containing protein;protein_id=WP_015876897.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3061428 3062222 . - . ID=gene-NIV78_RS14420;Name=NIV78_RS14420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14420 NZ_CP100136.1 Protein Homology CDS 3061428 3062222 . - 0 ID=cds-WP_015876898.1;Parent=gene-NIV78_RS14420;Dbxref=Genbank:WP_015876898.1;Name=WP_015876898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876898.1;locus_tag=NIV78_RS14420;product=AzlC family ABC transporter permease;protein_id=WP_015876898.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3062538 3062732 . + . ID=gene-NIV78_RS14425;Name=NIV78_RS14425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14425 NZ_CP100136.1 Protein Homology CDS 3062538 3062732 . + 0 ID=cds-WP_015876899.1;Parent=gene-NIV78_RS14425;Dbxref=Genbank:WP_015876899.1;Name=WP_015876899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007180502.1;locus_tag=NIV78_RS14425;product=zinc-finger domain-containing protein;protein_id=WP_015876899.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3062853 3063893 . + . ID=gene-NIV78_RS14430;Name=waaF;gbkey=Gene;gene=waaF;gene_biotype=protein_coding;locus_tag=NIV78_RS14430 NZ_CP100136.1 Protein Homology CDS 3062853 3063893 . + 0 ID=cds-WP_015876900.1;Parent=gene-NIV78_RS14430;Dbxref=Genbank:WP_015876900.1;Name=WP_015876900.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=waaF;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011401829.1;locus_tag=NIV78_RS14430;product=lipopolysaccharide heptosyltransferase II;protein_id=WP_015876900.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3063986 3064432 . + . ID=gene-NIV78_RS14435;Name=NIV78_RS14435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14435 NZ_CP100136.1 Protein Homology CDS 3063986 3064432 . + 0 ID=cds-WP_015876901.1;Parent=gene-NIV78_RS14435;Dbxref=Genbank:WP_015876901.1;Name=WP_015876901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090801.1;locus_tag=NIV78_RS14435;product=nuclear transport factor 2 family protein;protein_id=WP_015876901.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3064449 3065495 . + . ID=gene-NIV78_RS14440;Name=NIV78_RS14440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14440 NZ_CP100136.1 Protein Homology CDS 3064449 3065495 . + 0 ID=cds-WP_045678848.1;Parent=gene-NIV78_RS14440;Dbxref=Genbank:WP_045678848.1;Name=WP_045678848.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876902.1;locus_tag=NIV78_RS14440;product=hydrolase;protein_id=WP_045678848.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3065488 3066093 . + . ID=gene-NIV78_RS14445;Name=NIV78_RS14445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14445 NZ_CP100136.1 Protein Homology CDS 3065488 3066093 . + 0 ID=cds-WP_169512128.1;Parent=gene-NIV78_RS14445;Dbxref=Genbank:WP_169512128.1;Name=WP_169512128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876903.1;locus_tag=NIV78_RS14445;product=DUF2946 family protein;protein_id=WP_169512128.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3066123 3067808 . - . ID=gene-NIV78_RS14450;Name=NIV78_RS14450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14450 NZ_CP100136.1 Protein Homology CDS 3066123 3067808 . - 0 ID=cds-WP_198513105.1;Parent=gene-NIV78_RS14450;Dbxref=Genbank:WP_198513105.1;Name=WP_198513105.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004548066.1;locus_tag=NIV78_RS14450;product=M48 family metalloprotease;protein_id=WP_198513105.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3067807 3067935 . + . ID=gene-NIV78_RS14455;Name=NIV78_RS14455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14455 NZ_CP100136.1 GeneMarkS-2+ CDS 3067807 3067935 . + 0 ID=cds-WP_017433166.1;Parent=gene-NIV78_RS14455;Dbxref=Genbank:WP_017433166.1;Name=WP_017433166.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS14455;product=hypothetical protein;protein_id=WP_017433166.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3067962 3068441 . + . ID=gene-NIV78_RS14460;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=NIV78_RS14460 NZ_CP100136.1 Protein Homology CDS 3067962 3068441 . + 0 ID=cds-WP_043226148.1;Parent=gene-NIV78_RS14460;Dbxref=Genbank:WP_043226148.1;Name=WP_043226148.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaC;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699256.1;locus_tag=NIV78_RS14460;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_043226148.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3068553 3069674 . - . ID=gene-NIV78_RS14465;Name=NIV78_RS14465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14465 NZ_CP100136.1 Protein Homology CDS 3068553 3069674 . - 0 ID=cds-WP_171466832.1;Parent=gene-NIV78_RS14465;Dbxref=Genbank:WP_171466832.1;Name=WP_171466832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004184655.1;locus_tag=NIV78_RS14465;product=porin;protein_id=WP_171466832.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3070012 3070176 . - . ID=gene-NIV78_RS14470;Name=NIV78_RS14470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14470 NZ_CP100136.1 GeneMarkS-2+ CDS 3070012 3070176 . - 0 ID=cds-WP_017433164.1;Parent=gene-NIV78_RS14470;Dbxref=Genbank:WP_017433164.1;Name=WP_017433164.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS14470;product=hypothetical protein;protein_id=WP_017433164.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3070175 3070324 . + . ID=gene-NIV78_RS14475;Name=NIV78_RS14475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14475 NZ_CP100136.1 GeneMarkS-2+ CDS 3070175 3070324 . + 0 ID=cds-WP_017433163.1;Parent=gene-NIV78_RS14475;Dbxref=Genbank:WP_017433163.1;Name=WP_017433163.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS14475;product=hypothetical protein;protein_id=WP_017433163.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3070693 3071055 . - . ID=gene-NIV78_RS14480;Name=NIV78_RS14480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14480 NZ_CP100136.1 Protein Homology CDS 3070693 3071055 . - 0 ID=cds-WP_015876907.1;Parent=gene-NIV78_RS14480;Dbxref=Genbank:WP_015876907.1;Name=WP_015876907.1;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876907.1;locus_tag=NIV78_RS14480;product=TonB family protein;protein_id=WP_015876907.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3071780 3073561 . - . ID=gene-NIV78_RS14485;Name=NIV78_RS14485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14485 NZ_CP100136.1 Protein Homology CDS 3071780 3073561 . - 0 ID=cds-WP_043226144.1;Parent=gene-NIV78_RS14485;Dbxref=Genbank:WP_043226144.1;Name=WP_043226144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600119.1;locus_tag=NIV78_RS14485;product=Wzy polymerase domain-containing protein;protein_id=WP_043226144.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3073793 3074344 . - . ID=gene-NIV78_RS14490;Name=NIV78_RS14490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14490 NZ_CP100136.1 Protein Homology CDS 3073793 3074344 . - 0 ID=cds-WP_232252294.1;Parent=gene-NIV78_RS14490;Dbxref=Genbank:WP_232252294.1;Name=WP_232252294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885922.1;locus_tag=NIV78_RS14490;product=pilin;protein_id=WP_232252294.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3074577 3075281 . - . ID=gene-NIV78_RS14495;Name=NIV78_RS14495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14495 NZ_CP100136.1 Protein Homology CDS 3074577 3075281 . - 0 ID=cds-WP_017924082.1;Parent=gene-NIV78_RS14495;Dbxref=Genbank:WP_017924082.1;Name=WP_017924082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699262.1;locus_tag=NIV78_RS14495;product=TerC family protein;protein_id=WP_017924082.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3075290 3075493 . + . ID=gene-NIV78_RS14500;Name=NIV78_RS14500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14500 NZ_CP100136.1 GeneMarkS-2+ CDS 3075290 3075493 . + 0 ID=cds-WP_157384193.1;Parent=gene-NIV78_RS14500;Dbxref=Genbank:WP_157384193.1;Name=WP_157384193.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS14500;product=hypothetical protein;protein_id=WP_157384193.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3075558 3076439 . - . ID=gene-NIV78_RS14505;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=NIV78_RS14505 NZ_CP100136.1 Protein Homology CDS 3075558 3076439 . - 0 ID=cds-WP_015876911.1;Parent=gene-NIV78_RS14505;Dbxref=Genbank:WP_015876911.1;Name=WP_015876911.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006049960.1;locus_tag=NIV78_RS14505;product=succinate--CoA ligase subunit alpha;protein_id=WP_015876911.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3076507 3077673 . - . ID=gene-NIV78_RS14510;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=NIV78_RS14510 NZ_CP100136.1 Protein Homology CDS 3076507 3077673 . - 0 ID=cds-WP_015876912.1;Parent=gene-NIV78_RS14510;Dbxref=Genbank:WP_015876912.1;Name=WP_015876912.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486694.1;locus_tag=NIV78_RS14510;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_015876912.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3078498 3079583 . - . ID=gene-NIV78_RS14515;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=NIV78_RS14515 NZ_CP100136.1 Protein Homology CDS 3078498 3079583 . - 0 ID=cds-WP_124836318.1;Parent=gene-NIV78_RS14515;Dbxref=Genbank:WP_124836318.1;Name=WP_124836318.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876914.1;locus_tag=NIV78_RS14515;product=recombination regulator RecX;protein_id=WP_124836318.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3079583 3080665 . - . ID=gene-NIV78_RS14520;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=NIV78_RS14520 NZ_CP100136.1 Protein Homology CDS 3079583 3080665 . - 0 ID=cds-WP_015876915.1;Parent=gene-NIV78_RS14520;Dbxref=Genbank:WP_015876915.1;Name=WP_015876915.1;Ontology_term=GO:0006281,GO:0006310,GO:0009432,GO:0003677,GO:0008094,GO:0005737;gbkey=CDS;gene=recA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189458.1;locus_tag=NIV78_RS14520;product=recombinase RecA;protein_id=WP_015876915.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3080864 3081622 . + . ID=gene-NIV78_RS14525;Name=NIV78_RS14525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14525 NZ_CP100136.1 Protein Homology CDS 3080864 3081622 . + 0 ID=cds-WP_015876916.1;Parent=gene-NIV78_RS14525;Dbxref=Genbank:WP_015876916.1;Name=WP_015876916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006049955.1;locus_tag=NIV78_RS14525;product=response regulator transcription factor;protein_id=WP_015876916.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3081652 3083229 . + . ID=gene-NIV78_RS14530;Name=NIV78_RS14530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14530 NZ_CP100136.1 Protein Homology CDS 3081652 3083229 . + 0 ID=cds-WP_257756989.1;Parent=gene-NIV78_RS14530;Dbxref=Genbank:WP_257756989.1;Name=WP_257756989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004536117.1;locus_tag=NIV78_RS14530;product=sensor histidine kinase N-terminal domain-containing protein;protein_id=WP_257756989.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3083473 3085131 . + . ID=gene-NIV78_RS14535;Name=NIV78_RS14535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14535 NZ_CP100136.1 Protein Homology CDS 3083473 3085131 . + 0 ID=cds-WP_017923126.1;Parent=gene-NIV78_RS14535;Dbxref=Genbank:WP_017923126.1;Name=WP_017923126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546128.1;locus_tag=NIV78_RS14535;product=MHS family MFS transporter;protein_id=WP_017923126.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3085223 3085299 . + . ID=gene-NIV78_RS14540;Name=NIV78_RS14540;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS14540 NZ_CP100136.1 tRNAscan-SE tRNA 3085223 3085299 . + . ID=rna-NIV78_RS14540;Parent=gene-NIV78_RS14540;anticodon=(pos:3085257..3085259);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS14540;product=tRNA-Met NZ_CP100136.1 tRNAscan-SE exon 3085223 3085299 . + . ID=exon-NIV78_RS14540-1;Parent=rna-NIV78_RS14540;anticodon=(pos:3085257..3085259);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS14540;product=tRNA-Met NZ_CP100136.1 RefSeq gene 3085462 3086775 . + . ID=gene-NIV78_RS14545;Name=NIV78_RS14545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14545 NZ_CP100136.1 GeneMarkS-2+ CDS 3085462 3086775 . + 0 ID=cds-WP_257756990.1;Parent=gene-NIV78_RS14545;Dbxref=Genbank:WP_257756990.1;Name=WP_257756990.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS14545;product=hypothetical protein;protein_id=WP_257756990.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3086776 3087642 . - . ID=gene-NIV78_RS14550;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=NIV78_RS14550 NZ_CP100136.1 Protein Homology CDS 3086776 3087642 . - 0 ID=cds-WP_012732871.1-5;Parent=gene-NIV78_RS14550;Dbxref=Genbank:WP_012732871.1;Name=WP_012732871.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476481.1;locus_tag=NIV78_RS14550;product=IS21-like element ISBcen28 family helper ATPase IstB;protein_id=WP_012732871.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3087639 3088895 . - . ID=gene-NIV78_RS14555;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=NIV78_RS14555 NZ_CP100136.1 Protein Homology CDS 3087639 3088895 . - 0 ID=cds-WP_012734039.1-5;Parent=gene-NIV78_RS14555;Dbxref=Genbank:WP_012734039.1;Name=WP_012734039.1;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476480.1;locus_tag=NIV78_RS14555;product=IS21 family transposase;protein_id=WP_012734039.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3089132 3090369 . - . ID=gene-NIV78_RS14560;Name=NIV78_RS14560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14560 NZ_CP100136.1 Protein Homology CDS 3090078 3090369 . - 0 ID=cds-WP_088499505.1;Parent=gene-NIV78_RS14560;Dbxref=Genbank:WP_088499505.1;Name=WP_088499505.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558218.1;locus_tag=NIV78_RS14560;product=IS3 family transposase;protein_id=WP_088499505.1;transl_table=11 NZ_CP100136.1 Protein Homology CDS 3089132 3090078 . - 2 ID=cds-WP_088499505.1;Parent=gene-NIV78_RS14560;Dbxref=Genbank:WP_088499505.1;Name=WP_088499505.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558218.1;locus_tag=NIV78_RS14560;product=IS3 family transposase;protein_id=WP_088499505.1;transl_table=11 NZ_CP100136.1 cmsearch sequence_feature 3089972 3090088 . - . ID=id-NIV78_RS14560;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS14560 NZ_CP100136.1 RefSeq gene 3090410 3090715 . + . ID=gene-NIV78_RS14565;Name=NIV78_RS14565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14565 NZ_CP100136.1 GeneMarkS-2+ CDS 3090410 3090715 . + 0 ID=cds-WP_257756992.1;Parent=gene-NIV78_RS14565;Dbxref=Genbank:WP_257756992.1;Name=WP_257756992.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS14565;product=hypothetical protein;protein_id=WP_257756992.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3091057 3092763 . - . ID=gene-NIV78_RS14570;Name=NIV78_RS14570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14570 NZ_CP100136.1 Protein Homology CDS 3091057 3092763 . - 0 ID=cds-WP_257756994.1;Parent=gene-NIV78_RS14570;Dbxref=Genbank:WP_257756994.1;Name=WP_257756994.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014044.2;locus_tag=NIV78_RS14570;product=DUF87 domain-containing protein;protein_id=WP_257756994.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3092760 3093896 . - . ID=gene-NIV78_RS14575;Name=NIV78_RS14575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14575 NZ_CP100136.1 Protein Homology CDS 3092760 3093896 . - 0 ID=cds-WP_257756995.1;Parent=gene-NIV78_RS14575;Dbxref=Genbank:WP_257756995.1;Name=WP_257756995.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024685.2;locus_tag=NIV78_RS14575;product=SIR2 family protein;protein_id=WP_257756995.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3094026 3097160 . - . ID=gene-NIV78_RS14580;Name=NIV78_RS14580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14580 NZ_CP100136.1 Protein Homology CDS 3094026 3097160 . - 0 ID=cds-WP_257756996.1;Parent=gene-NIV78_RS14580;Dbxref=Genbank:WP_257756996.1;Name=WP_257756996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020206037.1;locus_tag=NIV78_RS14580;product=type I restriction endonuclease subunit R;protein_id=WP_257756996.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3097168 3098523 . - . ID=gene-NIV78_RS14585;Name=NIV78_RS14585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14585 NZ_CP100136.1 Protein Homology CDS 3097168 3098523 . - 0 ID=cds-WP_257756997.1;Parent=gene-NIV78_RS14585;Dbxref=Genbank:WP_257756997.1;Name=WP_257756997.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013579.2;locus_tag=NIV78_RS14585;product=restriction endonuclease subunit S;protein_id=WP_257756997.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3098513 3100072 . - . ID=gene-NIV78_RS14590;Name=NIV78_RS14590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14590 NZ_CP100136.1 Protein Homology CDS 3098513 3100072 . - 0 ID=cds-WP_257756998.1;Parent=gene-NIV78_RS14590;Dbxref=Genbank:WP_257756998.1;Name=WP_257756998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020485772.1;locus_tag=NIV78_RS14590;product=type I restriction-modification system subunit M;protein_id=WP_257756998.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3100885 3101682 . - . ID=gene-NIV78_RS14595;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=NIV78_RS14595 NZ_CP100136.1 Protein Homology CDS 3100885 3101682 . - 0 ID=cds-WP_012732720.1-3;Parent=gene-NIV78_RS14595;Dbxref=Genbank:WP_012732720.1;Name=WP_012732720.1;Ontology_term=GO:0005524;gbkey=CDS;gene=istB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013700154.1;locus_tag=NIV78_RS14595;product=IS21-like element helper ATPase IstB;protein_id=WP_012732720.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3101675 3103180 . - . ID=gene-NIV78_RS14600;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=NIV78_RS14600 NZ_CP100136.1 Protein Homology CDS 3101675 3103180 . - 0 ID=cds-WP_012732721.1-3;Parent=gene-NIV78_RS14600;Dbxref=Genbank:WP_012732721.1;Name=WP_012732721.1;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546517.1;locus_tag=NIV78_RS14600;product=IS21 family transposase;protein_id=WP_012732721.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3103272 3103478 . - . ID=gene-NIV78_RS14605;Name=NIV78_RS14605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14605 NZ_CP100136.1 GeneMarkS-2+ CDS 3103272 3103478 . - 0 ID=cds-WP_257757406.1;Parent=gene-NIV78_RS14605;Dbxref=Genbank:WP_257757406.1;Name=WP_257757406.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS14605;product=hypothetical protein;protein_id=WP_257757406.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3103591 3103836 . + . ID=gene-NIV78_RS14610;Name=NIV78_RS14610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14610 NZ_CP100136.1 GeneMarkS-2+ CDS 3103591 3103836 . + 0 ID=cds-WP_157384130.1;Parent=gene-NIV78_RS14610;Dbxref=Genbank:WP_157384130.1;Name=WP_157384130.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS14610;product=hypothetical protein;protein_id=WP_157384130.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3104058 3106865 . + . ID=gene-NIV78_RS14615;Name=NIV78_RS14615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14615 NZ_CP100136.1 Protein Homology CDS 3104058 3106865 . + 0 ID=cds-WP_017923124.1;Parent=gene-NIV78_RS14615;Dbxref=Genbank:WP_017923124.1;Name=WP_017923124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423581.1;locus_tag=NIV78_RS14615;product=sugar ABC transporter;protein_id=WP_017923124.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3106855 3110796 . + . ID=gene-NIV78_RS14620;Name=NIV78_RS14620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14620 NZ_CP100136.1 Protein Homology CDS 3106855 3110796 . + 0 ID=cds-WP_251107165.1;Parent=gene-NIV78_RS14620;Dbxref=Genbank:WP_251107165.1;Name=WP_251107165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876921.1;locus_tag=NIV78_RS14620;product=tetratricopeptide repeat protein;protein_id=WP_251107165.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3110869 3111411 . + . ID=gene-NIV78_RS14625;Name=NIV78_RS14625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14625 NZ_CP100136.1 Protein Homology CDS 3110869 3111411 . + 0 ID=cds-WP_015876922.1;Parent=gene-NIV78_RS14625;Dbxref=Genbank:WP_015876922.1;Name=WP_015876922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876922.1;locus_tag=NIV78_RS14625;product=hypothetical protein;protein_id=WP_015876922.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3111470 3112879 . + . ID=gene-NIV78_RS14630;Name=NIV78_RS14630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14630 NZ_CP100136.1 Protein Homology CDS 3111470 3112879 . + 0 ID=cds-WP_257757000.1;Parent=gene-NIV78_RS14630;Dbxref=Genbank:WP_257757000.1;Name=WP_257757000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876923.1;locus_tag=NIV78_RS14630;product=PelD GGDEF domain-containing protein;protein_id=WP_257757000.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3112872 3113885 . + . ID=gene-NIV78_RS14635;Name=NIV78_RS14635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14635 NZ_CP100136.1 Protein Homology CDS 3112872 3113885 . + 0 ID=cds-WP_015876924.1;Parent=gene-NIV78_RS14635;Dbxref=Genbank:WP_015876924.1;Name=WP_015876924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876924.1;locus_tag=NIV78_RS14635;product=hypothetical protein;protein_id=WP_015876924.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3113882 3115504 . + . ID=gene-NIV78_RS14640;Name=pelF;gbkey=Gene;gene=pelF;gene_biotype=protein_coding;locus_tag=NIV78_RS14640 NZ_CP100136.1 Protein Homology CDS 3113882 3115504 . + 0 ID=cds-WP_017423215.1;Parent=gene-NIV78_RS14640;Dbxref=Genbank:WP_017423215.1;Name=WP_017423215.1;Ontology_term=GO:0016757;gbkey=CDS;gene=pelF;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876925.1;locus_tag=NIV78_RS14640;product=GT4 family glycosyltransferase PelF;protein_id=WP_017423215.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3115504 3116901 . + . ID=gene-NIV78_RS14645;Name=pelG;gbkey=Gene;gene=pelG;gene_biotype=protein_coding;locus_tag=NIV78_RS14645 NZ_CP100136.1 Protein Homology CDS 3115504 3116901 . + 0 ID=cds-WP_015876926.1;Parent=gene-NIV78_RS14645;Dbxref=Genbank:WP_015876926.1;Name=WP_015876926.1;gbkey=CDS;gene=pelG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876926.1;locus_tag=NIV78_RS14645;product=exopolysaccharide Pel transporter PelG;protein_id=WP_015876926.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 3117929 3118048 . - . ID=gene-NIV78_RS14650;Name=NIV78_RS14650;end_range=3118048,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS14650;partial=true;pseudo=true;start_range=.,3117929 NZ_CP100136.1 Protein Homology CDS 3117929 3118048 . - 0 ID=cds-NIV78_RS14650;Parent=gene-NIV78_RS14650;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0007165,GO:0016020;end_range=3118048,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012289229.1;locus_tag=NIV78_RS14650;partial=true;product=methyl-accepting chemotaxis protein;pseudo=true;start_range=.,3117929;transl_table=11 NZ_CP100136.1 RefSeq gene 3118506 3119660 . - . ID=gene-NIV78_RS14655;Name=NIV78_RS14655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14655 NZ_CP100136.1 Protein Homology CDS 3118506 3119660 . - 0 ID=cds-WP_015876928.1;Parent=gene-NIV78_RS14655;Dbxref=Genbank:WP_015876928.1;Name=WP_015876928.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327613.1;locus_tag=NIV78_RS14655;product=methionine aminotransferase;protein_id=WP_015876928.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3119926 3120663 . + . ID=gene-NIV78_RS14660;Name=NIV78_RS14660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14660 NZ_CP100136.1 Protein Homology CDS 3119926 3120663 . + 0 ID=cds-WP_153477248.1;Parent=gene-NIV78_RS14660;Dbxref=Genbank:WP_153477248.1;Name=WP_153477248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876929.1;locus_tag=NIV78_RS14660;product=NAD(P)-dependent oxidoreductase;protein_id=WP_153477248.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3120698 3122056 . - . ID=gene-NIV78_RS14665;Name=NIV78_RS14665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14665 NZ_CP100136.1 Protein Homology CDS 3120698 3122056 . - 0 ID=cds-WP_015876930.1;Parent=gene-NIV78_RS14665;Dbxref=Genbank:WP_015876930.1;Name=WP_015876930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424925.1;locus_tag=NIV78_RS14665;product=sensor histidine kinase;protein_id=WP_015876930.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3122049 3122726 . - . ID=gene-NIV78_RS14670;Name=NIV78_RS14670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14670 NZ_CP100136.1 Protein Homology CDS 3122049 3122726 . - 0 ID=cds-WP_015876931.1;Parent=gene-NIV78_RS14670;Dbxref=Genbank:WP_015876931.1;Name=WP_015876931.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876931.1;locus_tag=NIV78_RS14670;product=response regulator;protein_id=WP_015876931.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3122750 3124045 . - . ID=gene-NIV78_RS14675;Name=NIV78_RS14675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14675 NZ_CP100136.1 Protein Homology CDS 3122750 3124045 . - 0 ID=cds-WP_015876932.1;Parent=gene-NIV78_RS14675;Dbxref=Genbank:WP_015876932.1;Name=WP_015876932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876932.1;locus_tag=NIV78_RS14675;product=MFS transporter;protein_id=WP_015876932.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3124516 3125520 . - . ID=gene-NIV78_RS14680;Name=NIV78_RS14680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14680 NZ_CP100136.1 Protein Homology CDS 3124516 3125520 . - 0 ID=cds-WP_232252227.1;Parent=gene-NIV78_RS14680;Dbxref=Genbank:WP_232252227.1;Name=WP_232252227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876933.1;locus_tag=NIV78_RS14680;product=ABC transporter substrate-binding protein;protein_id=WP_232252227.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3126171 3127388 . + . ID=gene-NIV78_RS14685;Name=NIV78_RS14685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14685 NZ_CP100136.1 Protein Homology CDS 3126171 3127388 . + 0 ID=cds-WP_015876934.1;Parent=gene-NIV78_RS14685;Dbxref=Genbank:WP_015876934.1;Name=WP_015876934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876934.1;locus_tag=NIV78_RS14685;product=MFS transporter;protein_id=WP_015876934.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3127656 3128648 . + . ID=gene-NIV78_RS14690;Name=NIV78_RS14690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14690 NZ_CP100136.1 Protein Homology CDS 3127656 3128648 . + 0 ID=cds-WP_015876935.1;Parent=gene-NIV78_RS14690;Dbxref=Genbank:WP_015876935.1;Name=WP_015876935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876935.1;locus_tag=NIV78_RS14690;product=aldo/keto reductase;protein_id=WP_015876935.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3128802 3129626 . - . ID=gene-NIV78_RS14695;Name=NIV78_RS14695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14695 NZ_CP100136.1 Protein Homology CDS 3128802 3129626 . - 0 ID=cds-WP_153477246.1;Parent=gene-NIV78_RS14695;Dbxref=Genbank:WP_153477246.1;Name=WP_153477246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409408.1;locus_tag=NIV78_RS14695;product=PhnD/SsuA/transferrin family substrate-binding protein;protein_id=WP_153477246.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3129866 3130888 . + . ID=gene-NIV78_RS14700;Name=NIV78_RS14700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14700 NZ_CP100136.1 Protein Homology CDS 3129866 3130888 . + 0 ID=cds-WP_251107166.1;Parent=gene-NIV78_RS14700;Dbxref=Genbank:WP_251107166.1;Name=WP_251107166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876937.1;locus_tag=NIV78_RS14700;product=fatty acid desaturase;protein_id=WP_251107166.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3131001 3132179 . - . ID=gene-NIV78_RS14705;Name=NIV78_RS14705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14705 NZ_CP100136.1 Protein Homology CDS 3131001 3132179 . - 0 ID=cds-WP_017924736.1;Parent=gene-NIV78_RS14705;Dbxref=Genbank:WP_017924736.1;Name=WP_017924736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876938.1;locus_tag=NIV78_RS14705;product=GGDEF domain-containing protein;protein_id=WP_017924736.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3132653 3133621 . + . ID=gene-NIV78_RS14710;Name=NIV78_RS14710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14710 NZ_CP100136.1 Protein Homology CDS 3132653 3133621 . + 0 ID=cds-WP_251107167.1;Parent=gene-NIV78_RS14710;Dbxref=Genbank:WP_251107167.1;Name=WP_251107167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876939.1;locus_tag=NIV78_RS14710;product=hypothetical protein;protein_id=WP_251107167.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3134074 3137211 . + . ID=gene-NIV78_RS14715;Name=NIV78_RS14715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14715 NZ_CP100136.1 Protein Homology CDS 3134074 3137211 . + 0 ID=cds-WP_251107168.1;Parent=gene-NIV78_RS14715;Dbxref=Genbank:WP_251107168.1;Name=WP_251107168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876940.1;locus_tag=NIV78_RS14715;product=transglycosylase domain-containing protein;protein_id=WP_251107168.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3137319 3139010 . - . ID=gene-NIV78_RS14720;Name=NIV78_RS14720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14720 NZ_CP100136.1 Protein Homology CDS 3137319 3139010 . - 0 ID=cds-WP_015876941.1;Parent=gene-NIV78_RS14720;Dbxref=Genbank:WP_015876941.1;Name=WP_015876941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876941.1;locus_tag=NIV78_RS14720;product=metallophosphoesterase family protein;protein_id=WP_015876941.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3139216 3140133 . - . ID=gene-NIV78_RS14725;Name=NIV78_RS14725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14725 NZ_CP100136.1 Protein Homology CDS 3139216 3140133 . - 0 ID=cds-WP_251107169.1;Parent=gene-NIV78_RS14725;Dbxref=Genbank:WP_251107169.1;Name=WP_251107169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876942.1;locus_tag=NIV78_RS14725;product=CerR family C-terminal domain-containing protein;protein_id=WP_251107169.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3140226 3141368 . + . ID=gene-NIV78_RS14730;Name=NIV78_RS14730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14730 NZ_CP100136.1 Protein Homology CDS 3140226 3141368 . + 0 ID=cds-WP_015876943.1;Parent=gene-NIV78_RS14730;Dbxref=Genbank:WP_015876943.1;Name=WP_015876943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876943.1;locus_tag=NIV78_RS14730;product=HlyD family secretion protein;protein_id=WP_015876943.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3141361 3142953 . + . ID=gene-NIV78_RS14735;Name=NIV78_RS14735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14735 NZ_CP100136.1 Protein Homology CDS 3141361 3142953 . + 0 ID=cds-WP_257757001.1;Parent=gene-NIV78_RS14735;Dbxref=Genbank:WP_257757001.1;Name=WP_257757001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876944.1;locus_tag=NIV78_RS14735;product=multidrug efflux MFS transporter;protein_id=WP_257757001.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3142970 3144520 . + . ID=gene-NIV78_RS14740;Name=NIV78_RS14740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14740 NZ_CP100136.1 Protein Homology CDS 3142970 3144520 . + 0 ID=cds-WP_100555778.1;Parent=gene-NIV78_RS14740;Dbxref=Genbank:WP_100555778.1;Name=WP_100555778.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876945.1;locus_tag=NIV78_RS14740;product=efflux transporter outer membrane subunit;protein_id=WP_100555778.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3144561 3145241 . - . ID=gene-NIV78_RS14745;Name=NIV78_RS14745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14745 NZ_CP100136.1 Protein Homology CDS 3144561 3145241 . - 0 ID=cds-WP_015876946.1;Parent=gene-NIV78_RS14745;Dbxref=Genbank:WP_015876946.1;Name=WP_015876946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699308.1;locus_tag=NIV78_RS14745;product=FCD domain-containing protein;protein_id=WP_015876946.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3145375 3146523 . + . ID=gene-NIV78_RS14750;Name=dgoD;gbkey=Gene;gene=dgoD;gene_biotype=protein_coding;locus_tag=NIV78_RS14750 NZ_CP100136.1 Protein Homology CDS 3145375 3146523 . + 0 ID=cds-WP_015876947.1;Parent=gene-NIV78_RS14750;Dbxref=Genbank:WP_015876947.1;Name=WP_015876947.1;Ontology_term=GO:0009063,GO:0008869;gbkey=CDS;gene=dgoD;go_function=galactonate dehydratase activity|0008869||IEA;go_process=cellular amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018437736.1;locus_tag=NIV78_RS14750;product=galactonate dehydratase;protein_id=WP_015876947.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3146546 3147121 . - . ID=gene-NIV78_RS14755;Name=NIV78_RS14755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14755 NZ_CP100136.1 Protein Homology CDS 3146546 3147121 . - 0 ID=cds-WP_015876948.1;Parent=gene-NIV78_RS14755;Dbxref=Genbank:WP_015876948.1;Name=WP_015876948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424408.1;locus_tag=NIV78_RS14755;product=suppressor of fused domain protein;protein_id=WP_015876948.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3147280 3148212 . - . ID=gene-NIV78_RS14760;Name=NIV78_RS14760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14760 NZ_CP100136.1 Protein Homology CDS 3147280 3148212 . - 0 ID=cds-WP_017923332.1;Parent=gene-NIV78_RS14760;Dbxref=Genbank:WP_017923332.1;Name=WP_017923332.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876949.1;locus_tag=NIV78_RS14760;product=CopD family protein;protein_id=WP_017923332.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3148647 3149420 . + . ID=gene-NIV78_RS14765;Name=NIV78_RS14765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14765 NZ_CP100136.1 Protein Homology CDS 3148647 3149420 . + 0 ID=cds-WP_035978564.1;Parent=gene-NIV78_RS14765;Dbxref=Genbank:WP_035978564.1;Name=WP_035978564.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546139.1;locus_tag=NIV78_RS14765;product=c-type cytochrome;protein_id=WP_035978564.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3149440 3150744 . + . ID=gene-NIV78_RS14770;Name=NIV78_RS14770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14770 NZ_CP100136.1 Protein Homology CDS 3149440 3150744 . + 0 ID=cds-WP_015876951.1;Parent=gene-NIV78_RS14770;Dbxref=Genbank:WP_015876951.1;Name=WP_015876951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334110.1;locus_tag=NIV78_RS14770;product=cytochrome c;protein_id=WP_015876951.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3150875 3152326 . + . ID=gene-NIV78_RS14775;Name=NIV78_RS14775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14775 NZ_CP100136.1 Protein Homology CDS 3150875 3152326 . + 0 ID=cds-WP_015876952.1;Parent=gene-NIV78_RS14775;Dbxref=Genbank:WP_015876952.1;Name=WP_015876952.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892858.1;locus_tag=NIV78_RS14775;product=DEAD/DEAH box helicase;protein_id=WP_015876952.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3152485 3153048 . - . ID=gene-NIV78_RS14780;Name=NIV78_RS14780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14780 NZ_CP100136.1 Protein Homology CDS 3152485 3153048 . - 0 ID=cds-WP_015876953.1;Parent=gene-NIV78_RS14780;Dbxref=Genbank:WP_015876953.1;Name=WP_015876953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876953.1;locus_tag=NIV78_RS14780;product=hypothetical protein;protein_id=WP_015876953.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3153032 3153859 . - . ID=gene-NIV78_RS14785;Name=NIV78_RS14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14785 NZ_CP100136.1 Protein Homology CDS 3153032 3153859 . - 0 ID=cds-WP_015876954.1;Parent=gene-NIV78_RS14785;Dbxref=Genbank:WP_015876954.1;Name=WP_015876954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009903013.1;locus_tag=NIV78_RS14785;product=ferritin-like domain-containing protein;protein_id=WP_015876954.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3154221 3155861 . - . ID=gene-NIV78_RS14790;Name=NIV78_RS14790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14790 NZ_CP100136.1 Protein Homology CDS 3154221 3155861 . - 0 ID=cds-WP_100556415.1;Parent=gene-NIV78_RS14790;Dbxref=Genbank:WP_100556415.1;Name=WP_100556415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212762.1;locus_tag=NIV78_RS14790;product=gamma-glutamyltransferase family protein;protein_id=WP_100556415.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3156082 3156861 . + . ID=gene-NIV78_RS14795;Name=NIV78_RS14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14795 NZ_CP100136.1 Protein Homology CDS 3156082 3156861 . + 0 ID=cds-WP_015876956.1;Parent=gene-NIV78_RS14795;Dbxref=Genbank:WP_015876956.1;Name=WP_015876956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009911299.1;locus_tag=NIV78_RS14795;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_015876956.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3157182 3157379 . + . ID=gene-NIV78_RS14800;Name=NIV78_RS14800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14800 NZ_CP100136.1 Protein Homology CDS 3157182 3157379 . + 0 ID=cds-WP_015876957.1;Parent=gene-NIV78_RS14800;Dbxref=Genbank:WP_015876957.1;Name=WP_015876957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189182.1;locus_tag=NIV78_RS14800;product=phage tail assembly chaperone;protein_id=WP_015876957.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3157612 3157974 . - . ID=gene-NIV78_RS14805;Name=NIV78_RS14805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14805 NZ_CP100136.1 Protein Homology CDS 3157612 3157974 . - 0 ID=cds-WP_017424440.1;Parent=gene-NIV78_RS14805;Dbxref=Genbank:WP_017424440.1;Name=WP_017424440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197301.1;locus_tag=NIV78_RS14805;product=hypothetical protein;protein_id=WP_017424440.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3158153 3159685 . + . ID=gene-NIV78_RS14810;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=NIV78_RS14810 NZ_CP100136.1 Protein Homology CDS 3158153 3159685 . + 0 ID=cds-WP_015876959.1;Parent=gene-NIV78_RS14810;Dbxref=Genbank:WP_015876959.1;Name=WP_015876959.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004534185.1;locus_tag=NIV78_RS14810;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_015876959.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3159798 3161300 . + . ID=gene-NIV78_RS14815;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=NIV78_RS14815 NZ_CP100136.1 Protein Homology CDS 3159798 3161300 . + 0 ID=cds-WP_015876960.1;Parent=gene-NIV78_RS14815;Dbxref=Genbank:WP_015876960.1;Name=WP_015876960.1;Ontology_term=GO:0006071,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896124.1;locus_tag=NIV78_RS14815;product=glycerol kinase GlpK;protein_id=WP_015876960.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3161417 3162133 . + . ID=gene-NIV78_RS14820;Name=NIV78_RS14820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14820 NZ_CP100136.1 Protein Homology CDS 3161417 3162133 . + 0 ID=cds-WP_015876961.1;Parent=gene-NIV78_RS14820;Dbxref=Genbank:WP_015876961.1;Name=WP_015876961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010101791.1;locus_tag=NIV78_RS14820;product=aquaporin family protein;protein_id=WP_015876961.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3162323 3163009 . + . ID=gene-NIV78_RS14825;Name=NIV78_RS14825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14825 NZ_CP100136.1 Protein Homology CDS 3162323 3163009 . + 0 ID=cds-WP_015876962.1;Parent=gene-NIV78_RS14825;Dbxref=Genbank:WP_015876962.1;Name=WP_015876962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526142.1;locus_tag=NIV78_RS14825;product=HAD family hydrolase;protein_id=WP_015876962.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3163046 3163702 . - . ID=gene-NIV78_RS14830;Name=NIV78_RS14830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14830 NZ_CP100136.1 Protein Homology CDS 3163046 3163702 . - 0 ID=cds-WP_015876963.1;Parent=gene-NIV78_RS14830;Dbxref=Genbank:WP_015876963.1;Name=WP_015876963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876963.1;locus_tag=NIV78_RS14830;product=XRE family transcriptional regulator;protein_id=WP_015876963.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3164107 3165480 . + . ID=gene-NIV78_RS14835;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=NIV78_RS14835 NZ_CP100136.1 Protein Homology CDS 3164107 3165480 . + 0 ID=cds-WP_017923340.1;Parent=gene-NIV78_RS14835;Dbxref=Genbank:WP_017923340.1;Name=WP_017923340.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896118.1;locus_tag=NIV78_RS14835;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_017923340.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3165510 3166568 . + . ID=gene-NIV78_RS14840;Name=NIV78_RS14840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14840 NZ_CP100136.1 Protein Homology CDS 3165510 3166568 . + 0 ID=cds-WP_017923339.1;Parent=gene-NIV78_RS14840;Dbxref=Genbank:WP_017923339.1;Name=WP_017923339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526138.1;locus_tag=NIV78_RS14840;product=PhoH family protein;protein_id=WP_017923339.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3166772 3167587 . + . ID=gene-NIV78_RS14845;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=NIV78_RS14845 NZ_CP100136.1 Protein Homology CDS 3166772 3167587 . + 0 ID=cds-WP_017924587.1;Parent=gene-NIV78_RS14845;Dbxref=Genbank:WP_017924587.1;Name=WP_017924587.1;gbkey=CDS;gene=ybeY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497372.1;locus_tag=NIV78_RS14845;product=rRNA maturation RNase YbeY;protein_id=WP_017924587.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3167646 3168278 . + . ID=gene-NIV78_RS14850;Name=NIV78_RS14850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14850 NZ_CP100136.1 Protein Homology CDS 3167646 3168278 . + 0 ID=cds-WP_015876967.1;Parent=gene-NIV78_RS14850;Dbxref=Genbank:WP_015876967.1;Name=WP_015876967.1;Ontology_term=GO:0006751,GO:0003839;gbkey=CDS;go_function=gamma-glutamylcyclotransferase activity|0003839||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424003.1;locus_tag=NIV78_RS14850;product=gamma-glutamylcyclotransferase;protein_id=WP_015876967.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3168567 3169457 . + . ID=gene-NIV78_RS14855;Name=NIV78_RS14855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14855 NZ_CP100136.1 Protein Homology CDS 3168567 3169457 . + 0 ID=cds-WP_015876968.1;Parent=gene-NIV78_RS14855;Dbxref=Genbank:WP_015876968.1;Name=WP_015876968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024598.1;locus_tag=NIV78_RS14855;product=CBS domain-containing protein;protein_id=WP_015876968.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3169501 3171111 . + . ID=gene-NIV78_RS14860;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=NIV78_RS14860 NZ_CP100136.1 Protein Homology CDS 3169501 3171111 . + 0 ID=cds-WP_017924216.1;Parent=gene-NIV78_RS14860;Dbxref=Genbank:WP_017924216.1;Name=WP_017924216.1;Ontology_term=GO:0006497,GO:0042158,GO:0016410,GO:0016021;gbkey=CDS;gene=lnt;go_component=integral component of membrane|0016021||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=protein lipidation|0006497||IEA,lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522789.1;locus_tag=NIV78_RS14860;product=apolipoprotein N-acyltransferase;protein_id=WP_017924216.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3171146 3172801 . - . ID=gene-NIV78_RS14865;Name=NIV78_RS14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14865 NZ_CP100136.1 Protein Homology CDS 3171146 3172801 . - 0 ID=cds-WP_257757003.1;Parent=gene-NIV78_RS14865;Dbxref=Genbank:WP_257757003.1;Name=WP_257757003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876970.1;locus_tag=NIV78_RS14865;product=tetratricopeptide repeat protein;protein_id=WP_257757003.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3173101 3174108 . + . ID=gene-NIV78_RS14870;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=NIV78_RS14870 NZ_CP100136.1 Protein Homology CDS 3173101 3174108 . + 0 ID=cds-WP_015876971.1;Parent=gene-NIV78_RS14870;Dbxref=Genbank:WP_015876971.1;Name=WP_015876971.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyQ;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876971.1;locus_tag=NIV78_RS14870;product=glycine--tRNA ligase subunit alpha;protein_id=WP_015876971.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3174125 3176224 . + . ID=gene-NIV78_RS14875;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=NIV78_RS14875 NZ_CP100136.1 Protein Homology CDS 3174125 3176224 . + 0 ID=cds-WP_169512143.1;Parent=gene-NIV78_RS14875;Dbxref=Genbank:WP_169512143.1;Name=WP_169512143.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyS;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009963525.1;locus_tag=NIV78_RS14875;product=glycine--tRNA ligase subunit beta;protein_id=WP_169512143.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3176294 3176857 . + . ID=gene-NIV78_RS14880;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=NIV78_RS14880 NZ_CP100136.1 Protein Homology CDS 3176294 3176857 . + 0 ID=cds-WP_015876973.1;Parent=gene-NIV78_RS14880;Dbxref=Genbank:WP_015876973.1;Name=WP_015876973.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876973.1;locus_tag=NIV78_RS14880;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_015876973.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3176913 3177659 . + . ID=gene-NIV78_RS14885;Name=NIV78_RS14885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14885 NZ_CP100136.1 Protein Homology CDS 3176913 3177659 . + 0 ID=cds-WP_015876974.1;Parent=gene-NIV78_RS14885;Dbxref=Genbank:WP_015876974.1;Name=WP_015876974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876974.1;locus_tag=NIV78_RS14885;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=WP_015876974.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3177739 3178581 . + . ID=gene-NIV78_RS14890;Name=NIV78_RS14890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14890 NZ_CP100136.1 Protein Homology CDS 3177739 3178581 . + 0 ID=cds-WP_015876975.1;Parent=gene-NIV78_RS14890;Dbxref=Genbank:WP_015876975.1;Name=WP_015876975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010101761.1;locus_tag=NIV78_RS14890;product=M48 family metallopeptidase;protein_id=WP_015876975.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3178649 3179038 . - . ID=gene-NIV78_RS14895;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=NIV78_RS14895 NZ_CP100136.1 Protein Homology CDS 3178649 3179038 . - 0 ID=cds-WP_015876976.1;Parent=gene-NIV78_RS14895;Dbxref=Genbank:WP_015876976.1;Name=WP_015876976.1;Ontology_term=GO:0005975,GO:0051596,GO:0004462;gbkey=CDS;gene=gloA;go_function=lactoylglutathione lyase activity|0004462||IEA;go_process=carbohydrate metabolic process|0005975||IEA,methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189937.1;locus_tag=NIV78_RS14895;product=lactoylglutathione lyase;protein_id=WP_015876976.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3179184 3180014 . - . ID=gene-NIV78_RS14900;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=NIV78_RS14900 NZ_CP100136.1 Protein Homology CDS 3179184 3180014 . - 0 ID=cds-WP_015876977.1;Parent=gene-NIV78_RS14900;Dbxref=Genbank:WP_015876977.1;Name=WP_015876977.1;Ontology_term=GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522793.1;locus_tag=NIV78_RS14900;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_015876977.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3180050 3181042 . - . ID=gene-NIV78_RS14905;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=NIV78_RS14905 NZ_CP100136.1 Protein Homology CDS 3180050 3181042 . - 0 ID=cds-WP_169512146.1;Parent=gene-NIV78_RS14905;Dbxref=Genbank:WP_169512146.1;Name=WP_169512146.1;Ontology_term=GO:0042823,GO:0050570,GO:0051287;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876978.1;locus_tag=NIV78_RS14905;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_169512146.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3181054 3182409 . - . ID=gene-NIV78_RS14910;Name=NIV78_RS14910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14910 NZ_CP100136.1 Protein Homology CDS 3181054 3182409 . - 0 ID=cds-WP_015876979.1;Parent=gene-NIV78_RS14910;Dbxref=Genbank:WP_015876979.1;Name=WP_015876979.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876979.1;locus_tag=NIV78_RS14910;product=peptidylprolyl isomerase;protein_id=WP_015876979.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3182482 3184839 . - . ID=gene-NIV78_RS14915;Name=NIV78_RS14915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14915 NZ_CP100136.1 Protein Homology CDS 3182482 3184839 . - 0 ID=cds-WP_015876980.1;Parent=gene-NIV78_RS14915;Dbxref=Genbank:WP_015876980.1;Name=WP_015876980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546173.1;locus_tag=NIV78_RS14915;product=LPS-assembly protein LptD;protein_id=WP_015876980.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3185073 3186143 . + . ID=gene-NIV78_RS14920;Name=NIV78_RS14920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14920 NZ_CP100136.1 Protein Homology CDS 3185073 3186143 . + 0 ID=cds-WP_257757006.1;Parent=gene-NIV78_RS14920;Dbxref=Genbank:WP_257757006.1;Name=WP_257757006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477857.1;locus_tag=NIV78_RS14920;product=phosphotransferase;protein_id=WP_257757006.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3186164 3186910 . + . ID=gene-NIV78_RS14925;Name=NIV78_RS14925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14925 NZ_CP100136.1 Protein Homology CDS 3186164 3186910 . + 0 ID=cds-WP_124836334.1;Parent=gene-NIV78_RS14925;Dbxref=Genbank:WP_124836334.1;Name=WP_124836334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876982.1;locus_tag=NIV78_RS14925;product=nucleotidyltransferase family protein;protein_id=WP_124836334.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3186964 3188892 . - . ID=gene-NIV78_RS14930;Name=NIV78_RS14930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14930 NZ_CP100136.1 Protein Homology CDS 3186964 3188892 . - 0 ID=cds-WP_257757404.1;Parent=gene-NIV78_RS14930;Dbxref=Genbank:WP_257757404.1;Name=WP_257757404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876983.1;locus_tag=NIV78_RS14930;product=ABC transporter ATP-binding protein/permease;protein_id=WP_257757404.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3189039 3189437 . + . ID=gene-NIV78_RS14935;Name=NIV78_RS14935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14935 NZ_CP100136.1 Protein Homology CDS 3189039 3189437 . + 0 ID=cds-WP_015876984.1;Parent=gene-NIV78_RS14935;Dbxref=Genbank:WP_015876984.1;Name=WP_015876984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699344.1;locus_tag=NIV78_RS14935;product=acyl-CoA thioesterase;protein_id=WP_015876984.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3189537 3190043 . - . ID=gene-NIV78_RS14940;Name=NIV78_RS14940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14940 NZ_CP100136.1 Protein Homology CDS 3189537 3190043 . - 0 ID=cds-WP_251107556.1;Parent=gene-NIV78_RS14940;Dbxref=Genbank:WP_251107556.1;Name=WP_251107556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876985.1;locus_tag=NIV78_RS14940;product=nitrate reductase maturation protein NarM;protein_id=WP_251107556.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3190194 3191051 . + . ID=gene-NIV78_RS14945;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=NIV78_RS14945 NZ_CP100136.1 Protein Homology CDS 3190194 3191051 . + 0 ID=cds-WP_085962373.1;Parent=gene-NIV78_RS14945;Dbxref=Genbank:WP_085962373.1;Name=WP_085962373.1;Ontology_term=GO:0009061,GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876986.1;locus_tag=NIV78_RS14945;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_085962373.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3191226 3191993 . - . ID=gene-NIV78_RS14950;Name=NIV78_RS14950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14950 NZ_CP100136.1 Protein Homology CDS 3191226 3191993 . - 0 ID=cds-WP_017922980.1;Parent=gene-NIV78_RS14950;Dbxref=Genbank:WP_017922980.1;Name=WP_017922980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892928.1;locus_tag=NIV78_RS14950;product=enoyl-CoA hydratase;protein_id=WP_017922980.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3192080 3193279 . - . ID=gene-NIV78_RS14955;Name=NIV78_RS14955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14955 NZ_CP100136.1 Protein Homology CDS 3192080 3193279 . - 0 ID=cds-WP_015876988.1;Parent=gene-NIV78_RS14955;Dbxref=Genbank:WP_015876988.1;Name=WP_015876988.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353151.1;locus_tag=NIV78_RS14955;product=acetyl-CoA C-acyltransferase;protein_id=WP_015876988.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3193353 3195788 . - . ID=gene-NIV78_RS14960;Name=NIV78_RS14960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14960 NZ_CP100136.1 Protein Homology CDS 3193353 3195788 . - 0 ID=cds-WP_257757008.1;Parent=gene-NIV78_RS14960;Dbxref=Genbank:WP_257757008.1;Name=WP_257757008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004537876.1;locus_tag=NIV78_RS14960;product=3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein;protein_id=WP_257757008.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3195913 3197700 . - . ID=gene-NIV78_RS14965;Name=NIV78_RS14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14965 NZ_CP100136.1 Protein Homology CDS 3195913 3197700 . - 0 ID=cds-WP_015876990.1;Parent=gene-NIV78_RS14965;Dbxref=Genbank:WP_015876990.1;Name=WP_015876990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017772699.1;locus_tag=NIV78_RS14965;product=acyl-CoA dehydrogenase C-terminal domain-containing protein;protein_id=WP_015876990.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3197757 3198356 . - . ID=gene-NIV78_RS14970;Name=NIV78_RS14970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14970 NZ_CP100136.1 Protein Homology CDS 3197757 3198356 . - 0 ID=cds-WP_013699351.1;Parent=gene-NIV78_RS14970;Dbxref=Genbank:WP_013699351.1;Name=WP_013699351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006047961.1;locus_tag=NIV78_RS14970;product=TetR/AcrR family transcriptional regulator;protein_id=WP_013699351.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3198596 3199870 . - . ID=gene-NIV78_RS14975;Name=NIV78_RS14975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14975 NZ_CP100136.1 Protein Homology CDS 3198596 3199870 . - 0 ID=cds-WP_017922981.1;Parent=gene-NIV78_RS14975;Dbxref=Genbank:WP_017922981.1;Name=WP_017922981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189031.1;locus_tag=NIV78_RS14975;product=phospholipase D-like domain-containing protein;protein_id=WP_017922981.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3199867 3200343 . - . ID=gene-NIV78_RS14980;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=NIV78_RS14980 NZ_CP100136.1 Protein Homology CDS 3199867 3200343 . - 0 ID=cds-WP_015876992.1;Parent=gene-NIV78_RS14980;Dbxref=Genbank:WP_015876992.1;Name=WP_015876992.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010114036.1;locus_tag=NIV78_RS14980;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_015876992.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3200651 3202450 . - . ID=gene-NIV78_RS14985;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=NIV78_RS14985 NZ_CP100136.1 Protein Homology CDS 3200651 3202450 . - 0 ID=cds-WP_015876993.1;Parent=gene-NIV78_RS14985;Dbxref=Genbank:WP_015876993.1;Name=WP_015876993.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024571.1;locus_tag=NIV78_RS14985;product=aspartate--tRNA ligase;protein_id=WP_015876993.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3202506 3203156 . - . ID=gene-NIV78_RS14990;Name=NIV78_RS14990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14990 NZ_CP100136.1 Protein Homology CDS 3202506 3203156 . - 0 ID=cds-WP_015876994.1;Parent=gene-NIV78_RS14990;Dbxref=Genbank:WP_015876994.1;Name=WP_015876994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024570.1;locus_tag=NIV78_RS14990;product=DUF502 domain-containing protein;protein_id=WP_015876994.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3203227 3203574 . - . ID=gene-NIV78_RS14995;Name=NIV78_RS14995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS14995 NZ_CP100136.1 Protein Homology CDS 3203227 3203574 . - 0 ID=cds-WP_100556420.1;Parent=gene-NIV78_RS14995;Dbxref=Genbank:WP_100556420.1;Name=WP_100556420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876995.1;locus_tag=NIV78_RS14995;product=FmdB family transcriptional regulator;protein_id=WP_100556420.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3203619 3204299 . - . ID=gene-NIV78_RS15000;Name=NIV78_RS15000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15000 NZ_CP100136.1 Protein Homology CDS 3203619 3204299 . - 0 ID=cds-WP_100556421.1;Parent=gene-NIV78_RS15000;Dbxref=Genbank:WP_100556421.1;Name=WP_100556421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876996.1;locus_tag=NIV78_RS15000;product=thiopurine S-methyltransferase;protein_id=WP_100556421.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3204313 3205890 . - . ID=gene-NIV78_RS15005;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=NIV78_RS15005 NZ_CP100136.1 Protein Homology CDS 3204313 3205890 . - 0 ID=cds-WP_015876997.1;Parent=gene-NIV78_RS15005;Dbxref=Genbank:WP_015876997.1;Name=WP_015876997.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477840.1;locus_tag=NIV78_RS15005;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_015876997.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3205904 3206548 . - . ID=gene-NIV78_RS15010;Name=NIV78_RS15010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15010 NZ_CP100136.1 Protein Homology CDS 3205904 3206548 . - 0 ID=cds-WP_015876998.1;Parent=gene-NIV78_RS15010;Dbxref=Genbank:WP_015876998.1;Name=WP_015876998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761590.1;locus_tag=NIV78_RS15010;product=SCP2 sterol-binding domain-containing protein;protein_id=WP_015876998.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3206672 3207712 . - . ID=gene-NIV78_RS15015;Name=NIV78_RS15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15015 NZ_CP100136.1 Protein Homology CDS 3206672 3207712 . - 0 ID=cds-WP_035977872.1;Parent=gene-NIV78_RS15015;Dbxref=Genbank:WP_035977872.1;Name=WP_035977872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546188.1;locus_tag=NIV78_RS15015;product=TIM44-like domain-containing protein;protein_id=WP_035977872.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3207755 3208486 . - . ID=gene-NIV78_RS15020;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=NIV78_RS15020 NZ_CP100136.1 Protein Homology CDS 3207755 3208486 . - 0 ID=cds-WP_015877000.1;Parent=gene-NIV78_RS15020;Dbxref=Genbank:WP_015877000.1;Name=WP_015877000.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546189.1;locus_tag=NIV78_RS15020;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_015877000.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3208549 3208962 . - . ID=gene-NIV78_RS15025;Name=NIV78_RS15025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15025 NZ_CP100136.1 Protein Homology CDS 3208549 3208962 . - 0 ID=cds-WP_017423887.1;Parent=gene-NIV78_RS15025;Dbxref=Genbank:WP_017423887.1;Name=WP_017423887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487879.1;locus_tag=NIV78_RS15025;product=DUF971 domain-containing protein;protein_id=WP_017423887.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3208959 3209405 . - . ID=gene-NIV78_RS15030;Name=NIV78_RS15030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15030 NZ_CP100136.1 Protein Homology CDS 3208959 3209405 . - 0 ID=cds-WP_015877002.1;Parent=gene-NIV78_RS15030;Dbxref=Genbank:WP_015877002.1;Name=WP_015877002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877002.1;locus_tag=NIV78_RS15030;product=HIT family protein;protein_id=WP_015877002.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3209439 3213452 . - . ID=gene-NIV78_RS15035;Name=NIV78_RS15035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15035 NZ_CP100136.1 Protein Homology CDS 3209439 3213452 . - 0 ID=cds-WP_257757009.1;Parent=gene-NIV78_RS15035;Dbxref=Genbank:WP_257757009.1;Name=WP_257757009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004543744.1;locus_tag=NIV78_RS15035;product=FAD/FMN-binding oxidoreductase;protein_id=WP_257757009.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3213948 3215471 . + . ID=gene-NIV78_RS15040;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=NIV78_RS15040 NZ_CP100136.1 Protein Homology CDS 3213948 3215471 . + 0 ID=cds-WP_015877004.1;Parent=gene-NIV78_RS15040;Dbxref=Genbank:WP_015877004.1;Name=WP_015877004.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=L-threonine ammonia-lyase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334189.1;locus_tag=NIV78_RS15040;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_015877004.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3215489 3216313 . + . ID=gene-NIV78_RS15045;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=NIV78_RS15045 NZ_CP100136.1 Protein Homology CDS 3215489 3216313 . + 0 ID=cds-WP_015877005.1;Parent=gene-NIV78_RS15045;Dbxref=Genbank:WP_015877005.1;Name=WP_015877005.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011486769.1;locus_tag=NIV78_RS15045;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_015877005.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3216412 3216798 . - . ID=gene-NIV78_RS15050;Name=NIV78_RS15050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15050 NZ_CP100136.1 Protein Homology CDS 3216412 3216798 . - 0 ID=cds-WP_015877006.1;Parent=gene-NIV78_RS15050;Dbxref=Genbank:WP_015877006.1;Name=WP_015877006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751946.1;locus_tag=NIV78_RS15050;product=RidA family protein;protein_id=WP_015877006.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3216935 3218410 . - . ID=gene-NIV78_RS15055;Name=NIV78_RS15055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15055 NZ_CP100136.1 Protein Homology CDS 3216935 3218410 . - 0 ID=cds-WP_251107173.1;Parent=gene-NIV78_RS15055;Dbxref=Genbank:WP_251107173.1;Name=WP_251107173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009928903.1;locus_tag=NIV78_RS15055;product=amidohydrolase family protein;protein_id=WP_251107173.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3218412 3219299 . - . ID=gene-NIV78_RS15060;Name=NIV78_RS15060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15060 NZ_CP100136.1 Protein Homology CDS 3218412 3219299 . - 0 ID=cds-WP_017423532.1;Parent=gene-NIV78_RS15060;Dbxref=Genbank:WP_017423532.1;Name=WP_017423532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423532.1;locus_tag=NIV78_RS15060;product=MurR/RpiR family transcriptional regulator;protein_id=WP_017423532.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3219512 3220792 . + . ID=gene-NIV78_RS15065;Name=NIV78_RS15065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15065 NZ_CP100136.1 Protein Homology CDS 3219512 3220792 . + 0 ID=cds-WP_026051412.1;Parent=gene-NIV78_RS15065;Dbxref=Genbank:WP_026051412.1;Name=WP_026051412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009902905.1;locus_tag=NIV78_RS15065;product=amino acid deaminase;protein_id=WP_026051412.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3220954 3221535 . + . ID=gene-NIV78_RS15070;Name=NIV78_RS15070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15070 NZ_CP100136.1 Protein Homology CDS 3220954 3221535 . + 0 ID=cds-WP_017923749.1;Parent=gene-NIV78_RS15070;Dbxref=Genbank:WP_017923749.1;Name=WP_017923749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024552.1;locus_tag=NIV78_RS15070;product=DJ-1/PfpI family protein;protein_id=WP_017923749.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3221586 3222068 . - . ID=gene-NIV78_RS15075;Name=NIV78_RS15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15075 NZ_CP100136.1 Protein Homology CDS 3221586 3222068 . - 0 ID=cds-WP_017423530.1;Parent=gene-NIV78_RS15075;Dbxref=Genbank:WP_017423530.1;Name=WP_017423530.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423530.1;locus_tag=NIV78_RS15075;product=MarR family transcriptional regulator;protein_id=WP_017423530.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3222161 3223753 . - . ID=gene-NIV78_RS15080;Name=NIV78_RS15080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15080 NZ_CP100136.1 Protein Homology CDS 3222161 3223753 . - 0 ID=cds-WP_017923750.1;Parent=gene-NIV78_RS15080;Dbxref=Genbank:WP_017923750.1;Name=WP_017923750.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004205169.1;locus_tag=NIV78_RS15080;product=MFS transporter;protein_id=WP_017923750.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3223860 3224762 . + . ID=gene-NIV78_RS15085;Name=NIV78_RS15085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15085 NZ_CP100136.1 Protein Homology CDS 3223860 3224762 . + 0 ID=cds-WP_257757010.1;Parent=gene-NIV78_RS15085;Dbxref=Genbank:WP_257757010.1;Name=WP_257757010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877013.1;locus_tag=NIV78_RS15085;product=EcsC family protein;protein_id=WP_257757010.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3224759 3225703 . - . ID=gene-NIV78_RS15090;Name=NIV78_RS15090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15090 NZ_CP100136.1 Protein Homology CDS 3224759 3225703 . - 0 ID=cds-WP_035978994.1;Parent=gene-NIV78_RS15090;Dbxref=Genbank:WP_035978994.1;Name=WP_035978994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877014.1;locus_tag=NIV78_RS15090;product=alpha/beta hydrolase;protein_id=WP_035978994.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3225791 3226225 . - . ID=gene-NIV78_RS15095;Name=NIV78_RS15095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15095 NZ_CP100136.1 Protein Homology CDS 3225791 3226225 . - 0 ID=cds-WP_026051304.1;Parent=gene-NIV78_RS15095;Dbxref=Genbank:WP_026051304.1;Name=WP_026051304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657914.1;locus_tag=NIV78_RS15095;product=CHRD domain-containing protein;protein_id=WP_026051304.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3226654 3227664 . + . ID=gene-NIV78_RS15100;Name=NIV78_RS15100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15100 NZ_CP100136.1 Protein Homology CDS 3226654 3227664 . + 0 ID=cds-WP_043226924.1;Parent=gene-NIV78_RS15100;Dbxref=Genbank:WP_043226924.1;Name=WP_043226924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423021.1;locus_tag=NIV78_RS15100;product=hypothetical protein;protein_id=WP_043226924.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3227814 3229118 . + . ID=gene-NIV78_RS15105;Name=NIV78_RS15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15105 NZ_CP100136.1 Protein Homology CDS 3227814 3229118 . + 0 ID=cds-WP_017923994.1;Parent=gene-NIV78_RS15105;Dbxref=Genbank:WP_017923994.1;Name=WP_017923994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495491.1;locus_tag=NIV78_RS15105;product=FAD-binding oxidoreductase;protein_id=WP_017923994.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3229164 3230714 . - . ID=gene-NIV78_RS15110;Name=NIV78_RS15110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15110 NZ_CP100136.1 Protein Homology CDS 3229164 3230714 . - 0 ID=cds-WP_015877018.1;Parent=gene-NIV78_RS15110;Dbxref=Genbank:WP_015877018.1;Name=WP_015877018.1;Ontology_term=GO:0006855,GO:0009410,GO:0005887;gbkey=CDS;go_component=integral component of plasma membrane|0005887||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA,response to xenobiotic stimulus|0009410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423023.1;locus_tag=NIV78_RS15110;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_015877018.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3230733 3231941 . - . ID=gene-NIV78_RS15115;Name=NIV78_RS15115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15115 NZ_CP100136.1 Protein Homology CDS 3230733 3231941 . - 0 ID=cds-WP_017924162.1;Parent=gene-NIV78_RS15115;Dbxref=Genbank:WP_017924162.1;Name=WP_017924162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423024.1;locus_tag=NIV78_RS15115;product=EmrA/EmrK family multidrug efflux transporter periplasmic adaptor subunit;protein_id=WP_017924162.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3232021 3233541 . - . ID=gene-NIV78_RS15120;Name=NIV78_RS15120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15120 NZ_CP100136.1 Protein Homology CDS 3232021 3233541 . - 0 ID=cds-WP_015877020.1;Parent=gene-NIV78_RS15120;Dbxref=Genbank:WP_015877020.1;Name=WP_015877020.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877020.1;locus_tag=NIV78_RS15120;product=efflux transporter outer membrane subunit;protein_id=WP_015877020.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3233663 3234130 . - . ID=gene-NIV78_RS15125;Name=NIV78_RS15125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15125 NZ_CP100136.1 Protein Homology CDS 3233663 3234130 . - 0 ID=cds-WP_015877021.1;Parent=gene-NIV78_RS15125;Dbxref=Genbank:WP_015877021.1;Name=WP_015877021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877021.1;locus_tag=NIV78_RS15125;product=MarR family transcriptional regulator;protein_id=WP_015877021.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3234514 3235428 . - . ID=gene-NIV78_RS15130;Name=NIV78_RS15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15130 NZ_CP100136.1 Protein Homology CDS 3234514 3235428 . - 0 ID=cds-WP_015877022.1;Parent=gene-NIV78_RS15130;Dbxref=Genbank:WP_015877022.1;Name=WP_015877022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877022.1;locus_tag=NIV78_RS15130;product=LysR family transcriptional regulator;protein_id=WP_015877022.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3235660 3236235 . - . ID=gene-NIV78_RS15135;Name=NIV78_RS15135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15135 NZ_CP100136.1 Protein Homology CDS 3235660 3236235 . - 0 ID=cds-WP_017423025.1;Parent=gene-NIV78_RS15135;Dbxref=Genbank:WP_017423025.1;Name=WP_017423025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423025.1;locus_tag=NIV78_RS15135;product=hypothetical protein;protein_id=WP_017423025.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3236371 3237066 . - . ID=gene-NIV78_RS15140;Name=NIV78_RS15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15140 NZ_CP100136.1 Protein Homology CDS 3236371 3237066 . - 0 ID=cds-WP_017423026.1;Parent=gene-NIV78_RS15140;Dbxref=Genbank:WP_017423026.1;Name=WP_017423026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877023.1;locus_tag=NIV78_RS15140;product=hypothetical protein;protein_id=WP_017423026.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3237102 3237353 . + . ID=gene-NIV78_RS15145;Name=NIV78_RS15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15145 NZ_CP100136.1 GeneMarkS-2+ CDS 3237102 3237353 . + 0 ID=cds-WP_157808568.1;Parent=gene-NIV78_RS15145;Dbxref=Genbank:WP_157808568.1;Name=WP_157808568.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS15145;product=hypothetical protein;protein_id=WP_157808568.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3237375 3237938 . - . ID=gene-NIV78_RS15150;Name=NIV78_RS15150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15150 NZ_CP100136.1 Protein Homology CDS 3237375 3237938 . - 0 ID=cds-WP_017423027.1;Parent=gene-NIV78_RS15150;Dbxref=Genbank:WP_017423027.1;Name=WP_017423027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000741240.1;locus_tag=NIV78_RS15150;product=single-stranded DNA-binding protein;protein_id=WP_017423027.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3238009 3239205 . - . ID=gene-NIV78_RS15155;Name=NIV78_RS15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15155 NZ_CP100136.1 Protein Homology CDS 3238009 3239205 . - 0 ID=cds-WP_015877025.1;Parent=gene-NIV78_RS15155;Dbxref=Genbank:WP_015877025.1;Name=WP_015877025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877025.1;locus_tag=NIV78_RS15155;product=MFS transporter;protein_id=WP_015877025.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3239434 3242304 . + . ID=gene-NIV78_RS15160;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=NIV78_RS15160 NZ_CP100136.1 Protein Homology CDS 3239434 3242304 . + 0 ID=cds-WP_257757012.1;Parent=gene-NIV78_RS15160;Dbxref=Genbank:WP_257757012.1;Name=WP_257757012.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877026.1;locus_tag=NIV78_RS15160;product=excinuclease ABC subunit UvrA;protein_id=WP_257757012.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3242515 3243600 . + . ID=gene-NIV78_RS15165;Name=NIV78_RS15165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15165 NZ_CP100136.1 Protein Homology CDS 3242515 3243600 . + 0 ID=cds-WP_017423028.1;Parent=gene-NIV78_RS15165;Dbxref=Genbank:WP_017423028.1;Name=WP_017423028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014917426.1;locus_tag=NIV78_RS15165;product=membrane protein;protein_id=WP_017423028.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3243650 3244531 . - . ID=gene-NIV78_RS15170;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=NIV78_RS15170 NZ_CP100136.1 Protein Homology CDS 3243650 3244531 . - 0 ID=cds-WP_015877028.1;Parent=gene-NIV78_RS15170;Dbxref=Genbank:WP_015877028.1;Name=WP_015877028.1;Ontology_term=GO:0009152,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522850.1;locus_tag=NIV78_RS15170;product=formyltetrahydrofolate deformylase;protein_id=WP_015877028.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3244572 3245423 . - . ID=gene-NIV78_RS15175;Name=NIV78_RS15175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15175 NZ_CP100136.1 Protein Homology CDS 3244572 3245423 . - 0 ID=cds-WP_017922762.1;Parent=gene-NIV78_RS15175;Dbxref=Genbank:WP_017922762.1;Name=WP_017922762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877029.1;locus_tag=NIV78_RS15175;product=DUF4743 domain-containing protein;protein_id=WP_017922762.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3245431 3246045 . - . ID=gene-NIV78_RS15180;Name=NIV78_RS15180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15180 NZ_CP100136.1 Protein Homology CDS 3245431 3246045 . - 0 ID=cds-WP_015877030.1;Parent=gene-NIV78_RS15180;Dbxref=Genbank:WP_015877030.1;Name=WP_015877030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004530934.1;locus_tag=NIV78_RS15180;product=LysE family translocator;protein_id=WP_015877030.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3246123 3246689 . - . ID=gene-NIV78_RS15185;Name=NIV78_RS15185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15185 NZ_CP100136.1 Protein Homology CDS 3246123 3246689 . - 0 ID=cds-WP_017922763.1;Parent=gene-NIV78_RS15185;Dbxref=Genbank:WP_017922763.1;Name=WP_017922763.1;Ontology_term=GO:0006168,GO:0009116,GO:0003999;gbkey=CDS;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA,nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212706.1;locus_tag=NIV78_RS15185;product=adenine phosphoribosyltransferase;protein_id=WP_017922763.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3246817 3248823 . - . ID=gene-NIV78_RS15190;Name=NIV78_RS15190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15190 NZ_CP100136.1 Protein Homology CDS 3246817 3248823 . - 0 ID=cds-WP_017922764.1;Parent=gene-NIV78_RS15190;Dbxref=Genbank:WP_017922764.1;Name=WP_017922764.1;Ontology_term=GO:0006812,GO:1902600,GO:0005451,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=monovalent cation:proton antiporter activity|0005451||IEA;go_process=cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877032.1;locus_tag=NIV78_RS15190;product=monovalent cation:proton antiporter family protein;protein_id=WP_017922764.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3248977 3249960 . + . ID=gene-NIV78_RS15195;Name=NIV78_RS15195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15195 NZ_CP100136.1 Protein Homology CDS 3248977 3249960 . + 0 ID=cds-WP_015877033.1;Parent=gene-NIV78_RS15195;Dbxref=Genbank:WP_015877033.1;Name=WP_015877033.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699402.1;locus_tag=NIV78_RS15195;product=KpsF/GutQ family sugar-phosphate isomerase;protein_id=WP_015877033.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3249960 3250499 . + . ID=gene-NIV78_RS15200;Name=NIV78_RS15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15200 NZ_CP100136.1 Protein Homology CDS 3249960 3250499 . + 0 ID=cds-WP_015877034.1;Parent=gene-NIV78_RS15200;Dbxref=Genbank:WP_015877034.1;Name=WP_015877034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010113872.1;locus_tag=NIV78_RS15200;product=HAD family hydrolase;protein_id=WP_015877034.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3250503 3251117 . + . ID=gene-NIV78_RS15205;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=NIV78_RS15205 NZ_CP100136.1 Protein Homology CDS 3250503 3251117 . + 0 ID=cds-WP_015877035.1;Parent=gene-NIV78_RS15205;Dbxref=Genbank:WP_015877035.1;Name=WP_015877035.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptC;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893044.1;locus_tag=NIV78_RS15205;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_015877035.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3251136 3251807 . + . ID=gene-NIV78_RS15210;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=NIV78_RS15210 NZ_CP100136.1 Protein Homology CDS 3251136 3251807 . + 0 ID=cds-WP_015877036.1;Parent=gene-NIV78_RS15210;Dbxref=Genbank:WP_015877036.1;Name=WP_015877036.1;Ontology_term=GO:0015920,GO:0001530,GO:0030288,GO:0043190;gbkey=CDS;gene=lptA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide binding|0001530||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195213.1;locus_tag=NIV78_RS15210;product=lipopolysaccharide transport periplasmic protein LptA;protein_id=WP_015877036.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3251804 3252580 . + . ID=gene-NIV78_RS15215;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=NIV78_RS15215 NZ_CP100136.1 Protein Homology CDS 3251804 3252580 . + 0 ID=cds-WP_015877037.1;Parent=gene-NIV78_RS15215;Dbxref=Genbank:WP_015877037.1;Name=WP_015877037.1;Ontology_term=GO:0015920,GO:0015221,GO:0042626,GO:0009898,GO:0043190;gbkey=CDS;gene=lptB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886055.1;locus_tag=NIV78_RS15215;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_015877037.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3252759 3254270 . + . ID=gene-NIV78_RS15220;Name=NIV78_RS15220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15220 NZ_CP100136.1 Protein Homology CDS 3252759 3254270 . + 0 ID=cds-WP_015877038.1;Parent=gene-NIV78_RS15220;Dbxref=Genbank:WP_015877038.1;Name=WP_015877038.1;Ontology_term=GO:0006352,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195216.1;locus_tag=NIV78_RS15220;product=RNA polymerase factor sigma-54;protein_id=WP_015877038.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3254422 3254781 . + . ID=gene-NIV78_RS15225;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=NIV78_RS15225 NZ_CP100136.1 Protein Homology CDS 3254422 3254781 . + 0 ID=cds-WP_015877039.1;Parent=gene-NIV78_RS15225;Dbxref=Genbank:WP_015877039.1;Name=WP_015877039.1;Ontology_term=GO:0009386,GO:0045182,GO:0005840,GO:0022626;gbkey=CDS;gene=raiA;go_component=ribosome|0005840||IEA,cytosolic ribosome|0022626||IEA;go_function=translation regulator activity|0045182||IEA;go_process=translational attenuation|0009386||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195219.1;locus_tag=NIV78_RS15225;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_015877039.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3254998 3255510 . + . ID=gene-NIV78_RS15230;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=NIV78_RS15230 NZ_CP100136.1 Protein Homology CDS 3254998 3255510 . + 0 ID=cds-WP_015877040.1;Parent=gene-NIV78_RS15230;Dbxref=Genbank:WP_015877040.1;Name=WP_015877040.1;Ontology_term=GO:0006355,GO:0009401,GO:0008982;gbkey=CDS;gene=ptsN;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012431657.1;locus_tag=NIV78_RS15230;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WP_015877040.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3255645 3256613 . + . ID=gene-NIV78_RS15235;Name=hprK;gbkey=Gene;gene=hprK;gene_biotype=protein_coding;locus_tag=NIV78_RS15235 NZ_CP100136.1 Protein Homology CDS 3255645 3256613 . + 0 ID=cds-WP_015877041.1;Parent=gene-NIV78_RS15235;Dbxref=Genbank:WP_015877041.1;Name=WP_015877041.1;Ontology_term=GO:0009401,GO:0004674,GO:0016791;gbkey=CDS;gene=hprK;go_function=protein serine/threonine kinase activity|0004674||IEA,phosphatase activity|0016791||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011296542.1;locus_tag=NIV78_RS15235;product=HPr(Ser) kinase/phosphatase;protein_id=WP_015877041.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3256688 3257581 . + . ID=gene-NIV78_RS15240;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=NIV78_RS15240 NZ_CP100136.1 Protein Homology CDS 3256688 3257581 . + 0 ID=cds-WP_015877042.1;Parent=gene-NIV78_RS15240;Dbxref=Genbank:WP_015877042.1;Name=WP_015877042.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195227.1;locus_tag=NIV78_RS15240;product=RNase adapter RapZ;protein_id=WP_015877042.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3257612 3258247 . + . ID=gene-NIV78_RS15245;Name=NIV78_RS15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15245 NZ_CP100136.1 Protein Homology CDS 3257612 3258247 . + 0 ID=cds-WP_017432629.1;Parent=gene-NIV78_RS15245;Dbxref=Genbank:WP_017432629.1;Name=WP_017432629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600699.1;locus_tag=NIV78_RS15245;product=LON peptidase substrate-binding domain-containing protein;protein_id=WP_017432629.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3258300 3259409 . - . ID=gene-NIV78_RS15250;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=NIV78_RS15250 NZ_CP100136.1 Protein Homology CDS 3258300 3259409 . - 0 ID=cds-WP_017923072.1;Parent=gene-NIV78_RS15250;Dbxref=Genbank:WP_017923072.1;Name=WP_017923072.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0004844;gbkey=CDS;gene=mutY;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009972864.1;locus_tag=NIV78_RS15250;product=A/G-specific adenine glycosylase;protein_id=WP_017923072.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3259414 3260241 . - . ID=gene-NIV78_RS15255;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=NIV78_RS15255 NZ_CP100136.1 Protein Homology CDS 3259414 3260241 . - 0 ID=cds-WP_015877045.1;Parent=gene-NIV78_RS15255;Dbxref=Genbank:WP_015877045.1;Name=WP_015877045.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522858.1;locus_tag=NIV78_RS15255;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_015877045.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3260329 3262173 . + . ID=gene-NIV78_RS15260;Name=NIV78_RS15260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15260 NZ_CP100136.1 Protein Homology CDS 3260329 3262173 . + 0 ID=cds-WP_015877046.1;Parent=gene-NIV78_RS15260;Dbxref=Genbank:WP_015877046.1;Name=WP_015877046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255507.1;locus_tag=NIV78_RS15260;product=tetratricopeptide repeat protein;protein_id=WP_015877046.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3262170 3262805 . + . ID=gene-NIV78_RS15265;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=NIV78_RS15265 NZ_CP100136.1 Protein Homology CDS 3262170 3262805 . + 0 ID=cds-WP_251107174.1;Parent=gene-NIV78_RS15265;Dbxref=Genbank:WP_251107174.1;Name=WP_251107174.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolB;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877047.1;locus_tag=NIV78_RS15265;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_251107174.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3262843 3263721 . + . ID=gene-NIV78_RS15270;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=NIV78_RS15270 NZ_CP100136.1 Protein Homology CDS 3262843 3263721 . + 0 ID=cds-WP_015877048.1;Parent=gene-NIV78_RS15270;Dbxref=Genbank:WP_015877048.1;Name=WP_015877048.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877048.1;locus_tag=NIV78_RS15270;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_015877048.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3263774 3263850 . + . ID=gene-NIV78_RS15275;Name=NIV78_RS15275;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS15275 NZ_CP100136.1 tRNAscan-SE tRNA 3263774 3263850 . + . ID=rna-NIV78_RS15275;Parent=gene-NIV78_RS15275;anticodon=(pos:3263808..3263810);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS15275;product=tRNA-Gln NZ_CP100136.1 tRNAscan-SE exon 3263774 3263850 . + . ID=exon-NIV78_RS15275-1;Parent=rna-NIV78_RS15275;anticodon=(pos:3263808..3263810);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS15275;product=tRNA-Gln NZ_CP100136.1 RefSeq gene 3263896 3264852 . + . ID=gene-NIV78_RS15280;Name=NIV78_RS15280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15280 NZ_CP100136.1 Protein Homology CDS 3263896 3264852 . + 0 ID=cds-WP_026051571.1;Parent=gene-NIV78_RS15280;Dbxref=Genbank:WP_026051571.1;Name=WP_026051571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012431648.1;locus_tag=NIV78_RS15280;product=ribose-phosphate pyrophosphokinase;protein_id=WP_026051571.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3265042 3265656 . + . ID=gene-NIV78_RS15285;Name=NIV78_RS15285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15285 NZ_CP100136.1 Protein Homology CDS 3265042 3265656 . + 0 ID=cds-WP_015877050.1;Parent=gene-NIV78_RS15285;Dbxref=Genbank:WP_015877050.1;Name=WP_015877050.1;Ontology_term=GO:0006412,GO:0003735,GO:0008097;gbkey=CDS;go_function=structural constituent of ribosome|0003735||IEA,5S rRNA binding|0008097||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353236.1;locus_tag=NIV78_RS15285;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=WP_015877050.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3265793 3266398 . + . ID=gene-NIV78_RS15290;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=NIV78_RS15290 NZ_CP100136.1 Protein Homology CDS 3265793 3266398 . + 0 ID=cds-WP_015877051.1;Parent=gene-NIV78_RS15290;Dbxref=Genbank:WP_015877051.1;Name=WP_015877051.1;Ontology_term=GO:0006412,GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185241.1;locus_tag=NIV78_RS15290;product=aminoacyl-tRNA hydrolase;protein_id=WP_015877051.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3266483 3267550 . + . ID=gene-NIV78_RS15295;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=NIV78_RS15295 NZ_CP100136.1 Protein Homology CDS 3266483 3267550 . + 0 ID=cds-WP_035983605.1;Parent=gene-NIV78_RS15295;Dbxref=Genbank:WP_035983605.1;Name=WP_035983605.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212697.1;locus_tag=NIV78_RS15295;product=histidinol-phosphate transaminase;protein_id=WP_035983605.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3267615 3267884 . - . ID=gene-NIV78_RS15300;Name=NIV78_RS15300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15300 NZ_CP100136.1 Protein Homology CDS 3267615 3267884 . - 0 ID=cds-WP_015877053.1;Parent=gene-NIV78_RS15300;Dbxref=Genbank:WP_015877053.1;Name=WP_015877053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877053.1;locus_tag=NIV78_RS15300;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_015877053.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3268169 3269491 . + . ID=gene-NIV78_RS15305;Name=NIV78_RS15305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15305 NZ_CP100136.1 Protein Homology CDS 3268169 3269491 . + 0 ID=cds-WP_017424335.1;Parent=gene-NIV78_RS15305;Dbxref=Genbank:WP_017424335.1;Name=WP_017424335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403593.1;locus_tag=NIV78_RS15305;product=TIGR00366 family protein;protein_id=WP_017424335.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3269636 3270136 . - . ID=gene-NIV78_RS15310;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=NIV78_RS15310 NZ_CP100136.1 Protein Homology CDS 3269636 3270136 . - 0 ID=cds-WP_015877055.1;Parent=gene-NIV78_RS15310;Dbxref=Genbank:WP_015877055.1;Name=WP_015877055.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877055.1;locus_tag=NIV78_RS15310;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_015877055.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3270247 3270861 . - . ID=gene-NIV78_RS15315;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=NIV78_RS15315 NZ_CP100136.1 Protein Homology CDS 3270247 3270861 . - 0 ID=cds-WP_043225699.1;Parent=gene-NIV78_RS15315;Dbxref=Genbank:WP_043225699.1;Name=WP_043225699.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699424.1;locus_tag=NIV78_RS15315;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=WP_043225699.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3271049 3272224 . + . ID=gene-NIV78_RS15320;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=NIV78_RS15320 NZ_CP100136.1 Protein Homology CDS 3271049 3272224 . + 0 ID=cds-WP_161521125.1;Parent=gene-NIV78_RS15320;Dbxref=Genbank:WP_161521125.1;Name=WP_161521125.1;Ontology_term=GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195253.1;locus_tag=NIV78_RS15320;product=signal recognition particle-docking protein FtsY;protein_id=WP_161521125.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3272794 3273771 . + . ID=gene-NIV78_RS15325;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=NIV78_RS15325 NZ_CP100136.1 Protein Homology CDS 3272794 3273771 . + 0 ID=cds-WP_015877058.1;Parent=gene-NIV78_RS15325;Dbxref=Genbank:WP_015877058.1;Name=WP_015877058.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877058.1;locus_tag=NIV78_RS15325;product=DNA-binding protein YbiB;protein_id=WP_015877058.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3274185 3275834 . + . ID=gene-NIV78_RS15330;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=NIV78_RS15330 NZ_CP100136.1 Protein Homology CDS 3274185 3275834 . + 0 ID=cds-WP_017923767.1;Parent=gene-NIV78_RS15330;Dbxref=Genbank:WP_017923767.1;Name=WP_017923767.1;Ontology_term=GO:0009098,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254946.1;locus_tag=NIV78_RS15330;product=2-isopropylmalate synthase;protein_id=WP_017923767.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3276032 3276418 . - . ID=gene-NIV78_RS15335;Name=NIV78_RS15335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15335 NZ_CP100136.1 Protein Homology CDS 3276032 3276418 . - 0 ID=cds-WP_015877060.1;Parent=gene-NIV78_RS15335;Dbxref=Genbank:WP_015877060.1;Name=WP_015877060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877060.1;locus_tag=NIV78_RS15335;product=nuclear transport factor 2 family protein;protein_id=WP_015877060.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3276458 3277027 . - . ID=gene-NIV78_RS15340;Name=NIV78_RS15340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15340 NZ_CP100136.1 Protein Homology CDS 3276458 3277027 . - 0 ID=cds-WP_017923408.1;Parent=gene-NIV78_RS15340;Dbxref=Genbank:WP_017923408.1;Name=WP_017923408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483740.1;locus_tag=NIV78_RS15340;product=acyloxyacyl hydrolase;protein_id=WP_017923408.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3277391 3278326 . + . ID=gene-NIV78_RS15345;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=NIV78_RS15345 NZ_CP100136.1 Protein Homology CDS 3277391 3278326 . + 0 ID=cds-WP_015877062.1;Parent=gene-NIV78_RS15345;Dbxref=Genbank:WP_015877062.1;Name=WP_015877062.1;Ontology_term=GO:0006352,GO:0016987;gbkey=CDS;gene=rpoH;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893111.1;locus_tag=NIV78_RS15345;product=RNA polymerase sigma factor RpoH;protein_id=WP_015877062.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3278781 3279053 . + . ID=gene-NIV78_RS15350;Name=NIV78_RS15350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15350 NZ_CP100136.1 Protein Homology CDS 3278781 3279053 . + 0 ID=cds-WP_015877063.1;Parent=gene-NIV78_RS15350;Dbxref=Genbank:WP_015877063.1;Name=WP_015877063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877063.1;locus_tag=NIV78_RS15350;product=hypothetical protein;protein_id=WP_015877063.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3279040 3280614 . + . ID=gene-NIV78_RS15355;Name=NIV78_RS15355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15355 NZ_CP100136.1 Protein Homology CDS 3279040 3280614 . + 0 ID=cds-WP_017423454.1;Parent=gene-NIV78_RS15355;Dbxref=Genbank:WP_017423454.1;Name=WP_017423454.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423454.1;locus_tag=NIV78_RS15355;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_017423454.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3280652 3281788 . + . ID=gene-NIV78_RS15360;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=NIV78_RS15360 NZ_CP100136.1 Protein Homology CDS 3280652 3281788 . + 0 ID=cds-WP_015877065.1;Parent=gene-NIV78_RS15360;Dbxref=Genbank:WP_015877065.1;Name=WP_015877065.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010101549.1;locus_tag=NIV78_RS15360;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_015877065.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3281852 3281959 . + . ID=gene-NIV78_RS15365;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=NIV78_RS15365 NZ_CP100136.1 Protein Homology CDS 3281852 3281959 . + 0 ID=cds-WP_017432772.1;Parent=gene-NIV78_RS15365;Dbxref=Genbank:WP_017432772.1;Name=WP_017432772.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423455.1;locus_tag=NIV78_RS15365;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_017432772.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3282099 3283880 . - . ID=gene-NIV78_RS15370;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=NIV78_RS15370 NZ_CP100136.1 Protein Homology CDS 3282099 3283880 . - 0 ID=cds-WP_015877066.1;Parent=gene-NIV78_RS15370;Dbxref=Genbank:WP_015877066.1;Name=WP_015877066.1;Ontology_term=GO:0015572;gbkey=CDS;gene=nagE;go_function=N-acetylglucosamine transmembrane transporter activity|0015572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851037.1;locus_tag=NIV78_RS15370;product=N-acetylglucosamine-specific PTS transporter subunit IIBC;protein_id=WP_015877066.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3283969 3286557 . - . ID=gene-NIV78_RS15375;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=NIV78_RS15375 NZ_CP100136.1 Protein Homology CDS 3283969 3286557 . - 0 ID=cds-WP_171466718.1;Parent=gene-NIV78_RS15375;Dbxref=Genbank:WP_171466718.1;Name=WP_171466718.1;Ontology_term=GO:0006808,GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=regulation of nitrogen utilization|0006808||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877067.1;locus_tag=NIV78_RS15375;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_171466718.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3286573 3287580 . - . ID=gene-NIV78_RS15380;Name=NIV78_RS15380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15380 NZ_CP100136.1 Protein Homology CDS 3286573 3287580 . - 0 ID=cds-WP_017923716.1;Parent=gene-NIV78_RS15380;Dbxref=Genbank:WP_017923716.1;Name=WP_017923716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024455.1;locus_tag=NIV78_RS15380;product=SIS domain-containing protein;protein_id=WP_017923716.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3287573 3288676 . - . ID=gene-NIV78_RS15385;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=NIV78_RS15385 NZ_CP100136.1 Protein Homology CDS 3287573 3288676 . - 0 ID=cds-WP_017923717.1;Parent=gene-NIV78_RS15385;Dbxref=Genbank:WP_017923717.1;Name=WP_017923717.1;Ontology_term=GO:0006040,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=amino sugar metabolic process|0006040||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008921875.1;locus_tag=NIV78_RS15385;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_017923717.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3289421 3290341 . - . ID=gene-NIV78_RS15390;Name=NIV78_RS15390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15390 NZ_CP100136.1 Protein Homology CDS 3289421 3290341 . - 0 ID=cds-WP_017923718.1;Parent=gene-NIV78_RS15390;Dbxref=Genbank:WP_017923718.1;Name=WP_017923718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007589760.1;locus_tag=NIV78_RS15390;product=J domain-containing protein;protein_id=WP_017923718.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3290478 3293720 . - . ID=gene-NIV78_RS15395;Name=NIV78_RS15395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15395 NZ_CP100136.1 Protein Homology CDS 3290478 3293720 . - 0 ID=cds-WP_015877071.1;Parent=gene-NIV78_RS15395;Dbxref=Genbank:WP_015877071.1;Name=WP_015877071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699442.1;locus_tag=NIV78_RS15395;product=error-prone DNA polymerase;protein_id=WP_015877071.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3293725 3295197 . - . ID=gene-NIV78_RS15400;Name=NIV78_RS15400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15400 NZ_CP100136.1 Protein Homology CDS 3293725 3295197 . - 0 ID=cds-WP_015877072.1;Parent=gene-NIV78_RS15400;Dbxref=Genbank:WP_015877072.1;Name=WP_015877072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011807615.1;locus_tag=NIV78_RS15400;product=DNA polymerase Y family protein;protein_id=WP_015877072.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3295133 3295843 . - . ID=gene-NIV78_RS15405;Name=imuA;gbkey=Gene;gene=imuA;gene_biotype=protein_coding;locus_tag=NIV78_RS15405 NZ_CP100136.1 Protein Homology CDS 3295133 3295843 . - 0 ID=cds-WP_015877073.1;Parent=gene-NIV78_RS15405;Dbxref=Genbank:WP_015877073.1;Name=WP_015877073.1;Ontology_term=GO:0009432,GO:0051782;gbkey=CDS;gene=imuA;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195290.1;locus_tag=NIV78_RS15405;product=translesion DNA synthesis-associated protein ImuA;protein_id=WP_015877073.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3295992 3296807 . - . ID=gene-NIV78_RS15410;Name=NIV78_RS15410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15410 NZ_CP100136.1 Protein Homology CDS 3295992 3296807 . - 0 ID=cds-WP_015877074.1;Parent=gene-NIV78_RS15410;Dbxref=Genbank:WP_015877074.1;Name=WP_015877074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763338.1;locus_tag=NIV78_RS15410;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_015877074.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3297076 3297684 . - . ID=gene-NIV78_RS15415;Name=NIV78_RS15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15415 NZ_CP100136.1 Protein Homology CDS 3297076 3297684 . - 0 ID=cds-WP_026051497.1;Parent=gene-NIV78_RS15415;Dbxref=Genbank:WP_026051497.1;Name=WP_026051497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010101463.1;locus_tag=NIV78_RS15415;product=SCO family protein;protein_id=WP_026051497.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3297698 3298600 . - . ID=gene-NIV78_RS15420;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=NIV78_RS15420 NZ_CP100136.1 Protein Homology CDS 3297698 3298600 . - 0 ID=cds-WP_015877076.1;Parent=gene-NIV78_RS15420;Dbxref=Genbank:WP_015877076.1;Name=WP_015877076.1;Ontology_term=GO:0006783,GO:0008495;gbkey=CDS;gene=cyoE;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme biosynthetic process|0006783||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699448.1;locus_tag=NIV78_RS15420;product=heme o synthase;protein_id=WP_015877076.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3298615 3299724 . - . ID=gene-NIV78_RS15425;Name=NIV78_RS15425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15425 NZ_CP100136.1 Protein Homology CDS 3298615 3299724 . - 0 ID=cds-WP_015877077.1;Parent=gene-NIV78_RS15425;Dbxref=Genbank:WP_015877077.1;Name=WP_015877077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004543853.1;locus_tag=NIV78_RS15425;product=COX15/CtaA family protein;protein_id=WP_015877077.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3299756 3300478 . - . ID=gene-NIV78_RS15430;Name=NIV78_RS15430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15430 NZ_CP100136.1 Protein Homology CDS 3299756 3300478 . - 0 ID=cds-WP_017432875.1;Parent=gene-NIV78_RS15430;Dbxref=Genbank:WP_017432875.1;Name=WP_017432875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423900.1;locus_tag=NIV78_RS15430;product=hypothetical protein;protein_id=WP_017432875.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3300528 3301241 . - . ID=gene-NIV78_RS15435;Name=NIV78_RS15435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15435 NZ_CP100136.1 Protein Homology CDS 3300528 3301241 . - 0 ID=cds-WP_017923049.1;Parent=gene-NIV78_RS15435;Dbxref=Genbank:WP_017923049.1;Name=WP_017923049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877079.1;locus_tag=NIV78_RS15435;product=SURF1 family protein;protein_id=WP_017923049.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3301329 3301538 . + . ID=gene-NIV78_RS15440;Name=NIV78_RS15440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15440 NZ_CP100136.1 Protein Homology CDS 3301329 3301538 . + 0 ID=cds-WP_013699452.1;Parent=gene-NIV78_RS15440;Dbxref=Genbank:WP_013699452.1;Name=WP_013699452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334311.1;locus_tag=NIV78_RS15440;product=twin transmembrane helix small protein;protein_id=WP_013699452.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3301590 3302450 . - . ID=gene-NIV78_RS15445;Name=NIV78_RS15445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15445 NZ_CP100136.1 Protein Homology CDS 3301590 3302450 . - 0 ID=cds-WP_015877080.1;Parent=gene-NIV78_RS15445;Dbxref=Genbank:WP_015877080.1;Name=WP_015877080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877080.1;locus_tag=NIV78_RS15445;product=cytochrome c oxidase subunit 3;protein_id=WP_015877080.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3302582 3302770 . - . ID=gene-NIV78_RS15450;Name=NIV78_RS15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15450 NZ_CP100136.1 Protein Homology CDS 3302582 3302770 . - 0 ID=cds-WP_015877081.1;Parent=gene-NIV78_RS15450;Dbxref=Genbank:WP_015877081.1;Name=WP_015877081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398201.1;locus_tag=NIV78_RS15450;product=DUF2970 domain-containing protein;protein_id=WP_015877081.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3302807 3303388 . - . ID=gene-NIV78_RS15455;Name=NIV78_RS15455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15455 NZ_CP100136.1 Protein Homology CDS 3302807 3303388 . - 0 ID=cds-WP_015877082.1;Parent=gene-NIV78_RS15455;Dbxref=Genbank:WP_015877082.1;Name=WP_015877082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877082.1;locus_tag=NIV78_RS15455;product=cytochrome c oxidase assembly protein;protein_id=WP_015877082.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3303426 3303566 . - . ID=gene-NIV78_RS15460;Name=NIV78_RS15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15460 NZ_CP100136.1 Protein Homology CDS 3303426 3303566 . - 0 ID=cds-WP_015877083.1;Parent=gene-NIV78_RS15460;Dbxref=Genbank:WP_015877083.1;Name=WP_015877083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009908417.1;locus_tag=NIV78_RS15460;product=cytochrome oxidase small assembly protein;protein_id=WP_015877083.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3303623 3305230 . - . ID=gene-NIV78_RS15465;Name=ctaD;gbkey=Gene;gene=ctaD;gene_biotype=protein_coding;locus_tag=NIV78_RS15465 NZ_CP100136.1 Protein Homology CDS 3303623 3305230 . - 0 ID=cds-WP_017923050.1;Parent=gene-NIV78_RS15465;Dbxref=Genbank:WP_017923050.1;Name=WP_017923050.1;Ontology_term=GO:0004129;gbkey=CDS;gene=ctaD;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090602.1;locus_tag=NIV78_RS15465;product=cytochrome c oxidase subunit I;protein_id=WP_017923050.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3305285 3306925 . - . ID=gene-NIV78_RS15470;Name=coxB;gbkey=Gene;gene=coxB;gene_biotype=protein_coding;locus_tag=NIV78_RS15470 NZ_CP100136.1 Protein Homology CDS 3305285 3306925 . - 0 ID=cds-WP_251107176.1;Parent=gene-NIV78_RS15470;Dbxref=Genbank:WP_251107176.1;Name=WP_251107176.1;Ontology_term=GO:0004129;gbkey=CDS;gene=coxB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009970051.1;locus_tag=NIV78_RS15470;product=cytochrome c oxidase subunit II;protein_id=WP_251107176.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3306969 3307445 . - . ID=gene-NIV78_RS15475;Name=NIV78_RS15475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15475 NZ_CP100136.1 Protein Homology CDS 3306969 3307445 . - 0 ID=cds-WP_043226938.1;Parent=gene-NIV78_RS15475;Dbxref=Genbank:WP_043226938.1;Name=WP_043226938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699459.1;locus_tag=NIV78_RS15475;product=DUF2244 domain-containing protein;protein_id=WP_043226938.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3307681 3308643 . - . ID=gene-NIV78_RS15480;Name=NIV78_RS15480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15480 NZ_CP100136.1 Protein Homology CDS 3307681 3308643 . - 0 ID=cds-WP_035981001.1;Parent=gene-NIV78_RS15480;Dbxref=Genbank:WP_035981001.1;Name=WP_035981001.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877087.1;locus_tag=NIV78_RS15480;product=methyltransferase domain-containing protein;protein_id=WP_035981001.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3308725 3309549 . + . ID=gene-NIV78_RS15485;Name=NIV78_RS15485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15485 NZ_CP100136.1 Protein Homology CDS 3308725 3309549 . + 0 ID=cds-WP_251107177.1;Parent=gene-NIV78_RS15485;Dbxref=Genbank:WP_251107177.1;Name=WP_251107177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893161.1;locus_tag=NIV78_RS15485;product=ComF family protein;protein_id=WP_251107177.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3309707 3310177 . + . ID=gene-NIV78_RS15490;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=NIV78_RS15490 NZ_CP100136.1 Protein Homology CDS 3309707 3310177 . + 0 ID=cds-WP_015877089.1;Parent=gene-NIV78_RS15490;Dbxref=Genbank:WP_015877089.1;Name=WP_015877089.1;Ontology_term=GO:0006400,GO:0008175;gbkey=CDS;gene=trmL;go_function=tRNA methyltransferase activity|0008175||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017772595.1;locus_tag=NIV78_RS15490;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_015877089.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3310240 3310761 . - . ID=gene-NIV78_RS15495;Name=NIV78_RS15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15495 NZ_CP100136.1 Protein Homology CDS 3310240 3310761 . - 0 ID=cds-WP_017924300.1;Parent=gene-NIV78_RS15495;Dbxref=Genbank:WP_017924300.1;Name=WP_017924300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877090.1;locus_tag=NIV78_RS15495;product=O-acetyl-ADP-ribose deacetylase;protein_id=WP_017924300.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3311004 3312002 . - . ID=gene-NIV78_RS15500;Name=NIV78_RS15500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15500 NZ_CP100136.1 Protein Homology CDS 3311004 3312002 . - 0 ID=cds-WP_124836891.1;Parent=gene-NIV78_RS15500;Dbxref=Genbank:WP_124836891.1;Name=WP_124836891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546282.1;locus_tag=NIV78_RS15500;product=NAD(P)-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_124836891.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3312029 3312514 . - . ID=gene-NIV78_RS15505;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=NIV78_RS15505 NZ_CP100136.1 Protein Homology CDS 3312029 3312514 . - 0 ID=cds-WP_257757017.1;Parent=gene-NIV78_RS15505;Dbxref=Genbank:WP_257757017.1;Name=WP_257757017.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658008.1;locus_tag=NIV78_RS15505;product=protein-export chaperone SecB;protein_id=WP_257757017.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3312638 3312898 . - . ID=gene-NIV78_RS15510;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=NIV78_RS15510 NZ_CP100136.1 Protein Homology CDS 3312638 3312898 . - 0 ID=cds-WP_015877093.1;Parent=gene-NIV78_RS15510;Dbxref=Genbank:WP_015877093.1;Name=WP_015877093.1;Ontology_term=GO:0015036;gbkey=CDS;gene=grxC;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004200200.1;locus_tag=NIV78_RS15510;product=glutaredoxin 3;protein_id=WP_015877093.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3312910 3313317 . - . ID=gene-NIV78_RS15515;Name=NIV78_RS15515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15515 NZ_CP100136.1 Protein Homology CDS 3312910 3313317 . - 0 ID=cds-WP_017924334.1;Parent=gene-NIV78_RS15515;Dbxref=Genbank:WP_017924334.1;Name=WP_017924334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010101426.1;locus_tag=NIV78_RS15515;product=rhodanese-like domain-containing protein;protein_id=WP_017924334.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3313453 3314199 . + . ID=gene-NIV78_RS15520;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=NIV78_RS15520 NZ_CP100136.1 Protein Homology CDS 3313453 3314199 . + 0 ID=cds-WP_015877095.1;Parent=gene-NIV78_RS15520;Dbxref=Genbank:WP_015877095.1;Name=WP_015877095.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877095.1;locus_tag=NIV78_RS15520;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_015877095.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3314502 3316058 . + . ID=gene-NIV78_RS15525;Name=NIV78_RS15525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15525 NZ_CP100136.1 Protein Homology CDS 3314502 3316058 . + 0 ID=cds-WP_017423910.1;Parent=gene-NIV78_RS15525;Dbxref=Genbank:WP_017423910.1;Name=WP_017423910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877096.1;locus_tag=NIV78_RS15525;product=S41 family peptidase;protein_id=WP_017423910.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3316215 3316967 . + . ID=gene-NIV78_RS15530;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=NIV78_RS15530 NZ_CP100136.1 Protein Homology CDS 3316215 3316967 . + 0 ID=cds-WP_017924875.1;Parent=gene-NIV78_RS15530;Dbxref=Genbank:WP_017924875.1;Name=WP_017924875.1;Ontology_term=GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198009.1;locus_tag=NIV78_RS15530;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_017924875.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3317103 3318875 . - . ID=gene-NIV78_RS15535;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=NIV78_RS15535 NZ_CP100136.1 Protein Homology CDS 3317103 3318875 . - 0 ID=cds-WP_015877098.1;Parent=gene-NIV78_RS15535;Dbxref=Genbank:WP_015877098.1;Name=WP_015877098.1;Ontology_term=GO:0006808,GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=regulation of nitrogen utilization|0006808||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407042.1;locus_tag=NIV78_RS15535;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_015877098.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3319098 3319367 . - . ID=gene-NIV78_RS15540;Name=NIV78_RS15540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15540 NZ_CP100136.1 Protein Homology CDS 3319098 3319367 . - 0 ID=cds-WP_015877099.1;Parent=gene-NIV78_RS15540;Dbxref=Genbank:WP_015877099.1;Name=WP_015877099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010101417.1;locus_tag=NIV78_RS15540;product=HPr family phosphocarrier protein;protein_id=WP_015877099.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3319453 3319923 . - . ID=gene-NIV78_RS15545;Name=NIV78_RS15545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15545 NZ_CP100136.1 Protein Homology CDS 3319453 3319923 . - 0 ID=cds-WP_015877100.1;Parent=gene-NIV78_RS15545;Dbxref=Genbank:WP_015877100.1;Name=WP_015877100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877100.1;locus_tag=NIV78_RS15545;product=PTS sugar transporter subunit IIA;protein_id=WP_015877100.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3320160 3321116 . - . ID=gene-NIV78_RS15550;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=NIV78_RS15550 NZ_CP100136.1 Protein Homology CDS 3320160 3321116 . - 0 ID=cds-WP_017923398.1;Parent=gene-NIV78_RS15550;Dbxref=Genbank:WP_017923398.1;Name=WP_017923398.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198015.1;locus_tag=NIV78_RS15550;product=glutathione synthase;protein_id=WP_017923398.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3321188 3322477 . - . ID=gene-NIV78_RS15555;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=NIV78_RS15555 NZ_CP100136.1 Protein Homology CDS 3321188 3322477 . - 0 ID=cds-WP_015877102.1;Parent=gene-NIV78_RS15555;Dbxref=Genbank:WP_015877102.1;Name=WP_015877102.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013337902.1;locus_tag=NIV78_RS15555;product=glutamate--cysteine ligase;protein_id=WP_015877102.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3322732 3324213 . - . ID=gene-NIV78_RS15560;Name=NIV78_RS15560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15560 NZ_CP100136.1 Protein Homology CDS 3322732 3324213 . - 0 ID=cds-WP_251107178.1;Parent=gene-NIV78_RS15560;Dbxref=Genbank:WP_251107178.1;Name=WP_251107178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212654.1;locus_tag=NIV78_RS15560;product=ammonium transporter;protein_id=WP_251107178.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3324249 3324587 . - . ID=gene-NIV78_RS15565;Name=NIV78_RS15565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15565 NZ_CP100136.1 Protein Homology CDS 3324249 3324587 . - 0 ID=cds-WP_006398175.1;Parent=gene-NIV78_RS15565;Dbxref=Genbank:WP_006398175.1;Name=WP_006398175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018436703.1;locus_tag=NIV78_RS15565;product=P-II family nitrogen regulator;protein_id=WP_006398175.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3324936 3325193 . + . ID=gene-NIV78_RS15570;Name=NIV78_RS15570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15570 NZ_CP100136.1 Protein Homology CDS 3324936 3325193 . + 0 ID=cds-WP_015877104.1;Parent=gene-NIV78_RS15570;Dbxref=Genbank:WP_015877104.1;Name=WP_015877104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877104.1;locus_tag=NIV78_RS15570;product=accessory factor UbiK family protein;protein_id=WP_015877104.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3325406 3327019 . + . ID=gene-NIV78_RS15575;Name=NIV78_RS15575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15575 NZ_CP100136.1 Protein Homology CDS 3325406 3327019 . + 0 ID=cds-WP_251107179.1;Parent=gene-NIV78_RS15575;Dbxref=Genbank:WP_251107179.1;Name=WP_251107179.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004530962.1;locus_tag=NIV78_RS15575;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_251107179.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3327518 3328126 . - . ID=gene-NIV78_RS15580;Name=NIV78_RS15580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15580 NZ_CP100136.1 Protein Homology CDS 3327518 3328126 . - 0 ID=cds-WP_161521136.1;Parent=gene-NIV78_RS15580;Dbxref=Genbank:WP_161521136.1;Name=WP_161521136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877106.1;locus_tag=NIV78_RS15580;product=hypothetical protein;protein_id=WP_161521136.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3328439 3328975 . + . ID=gene-NIV78_RS15585;Name=NIV78_RS15585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15585 NZ_CP100136.1 Protein Homology CDS 3328439 3328975 . + 0 ID=cds-WP_085962374.1;Parent=gene-NIV78_RS15585;Dbxref=Genbank:WP_085962374.1;Name=WP_085962374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198028.1;locus_tag=NIV78_RS15585;product=TlpA family protein disulfide reductase;protein_id=WP_085962374.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3329051 3330418 . - . ID=gene-NIV78_RS15590;Name=NIV78_RS15590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15590 NZ_CP100136.1 Protein Homology CDS 3329051 3330418 . - 0 ID=cds-WP_015877108.1;Parent=gene-NIV78_RS15590;Dbxref=Genbank:WP_015877108.1;Name=WP_015877108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198029.1;locus_tag=NIV78_RS15590;product=sigma-54 dependent transcriptional regulator;protein_id=WP_015877108.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3330465 3332384 . - . ID=gene-NIV78_RS15595;Name=NIV78_RS15595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15595 NZ_CP100136.1 Protein Homology CDS 3330465 3332384 . - 0 ID=cds-WP_241766887.1;Parent=gene-NIV78_RS15595;Dbxref=Genbank:WP_241766887.1;Name=WP_241766887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024397.1;locus_tag=NIV78_RS15595;product=ATP-binding protein;protein_id=WP_241766887.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3332473 3333759 . - . ID=gene-NIV78_RS15600;Name=NIV78_RS15600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15600 NZ_CP100136.1 Protein Homology CDS 3332473 3333759 . - 0 ID=cds-WP_017433591.1;Parent=gene-NIV78_RS15600;Dbxref=Genbank:WP_017433591.1;Name=WP_017433591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877110.1;locus_tag=NIV78_RS15600;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_017433591.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3333930 3334265 . + . ID=gene-NIV78_RS15605;Name=NIV78_RS15605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15605 NZ_CP100136.1 GeneMarkS-2+ CDS 3333930 3334265 . + 0 ID=cds-WP_161521137.1;Parent=gene-NIV78_RS15605;Dbxref=Genbank:WP_161521137.1;Name=WP_161521137.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS15605;product=hypothetical protein;protein_id=WP_161521137.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3334241 3335404 . - . ID=gene-NIV78_RS15610;Name=NIV78_RS15610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15610 NZ_CP100136.1 Protein Homology CDS 3334241 3335404 . - 0 ID=cds-WP_161521138.1;Parent=gene-NIV78_RS15610;Dbxref=Genbank:WP_161521138.1;Name=WP_161521138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877111.1;locus_tag=NIV78_RS15610;product=acyl-CoA dehydrogenase;protein_id=WP_161521138.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3335419 3336636 . - . ID=gene-NIV78_RS15615;Name=NIV78_RS15615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15615 NZ_CP100136.1 Protein Homology CDS 3335419 3336636 . - 0 ID=cds-WP_161521139.1;Parent=gene-NIV78_RS15615;Dbxref=Genbank:WP_161521139.1;Name=WP_161521139.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851010.1;locus_tag=NIV78_RS15615;product=acyl-CoA dehydrogenase family protein;protein_id=WP_161521139.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3336693 3338822 . - . ID=gene-NIV78_RS15620;Name=NIV78_RS15620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15620 NZ_CP100136.1 Protein Homology CDS 3336693 3338822 . - 0 ID=cds-WP_100555708.1;Parent=gene-NIV78_RS15620;Dbxref=Genbank:WP_100555708.1;Name=WP_100555708.1;Ontology_term=GO:0006631,GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877113.1;locus_tag=NIV78_RS15620;product=3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein;protein_id=WP_100555708.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3338972 3339895 . + . ID=gene-NIV78_RS15625;Name=NIV78_RS15625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15625 NZ_CP100136.1 Protein Homology CDS 3338972 3339895 . + 0 ID=cds-WP_043228412.1;Parent=gene-NIV78_RS15625;Dbxref=Genbank:WP_043228412.1;Name=WP_043228412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877114.1;locus_tag=NIV78_RS15625;product=LysR family transcriptional regulator;protein_id=WP_043228412.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3340016 3341047 . - . ID=gene-NIV78_RS15630;Name=NIV78_RS15630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15630 NZ_CP100136.1 Protein Homology CDS 3340016 3341047 . - 0 ID=cds-WP_161521140.1;Parent=gene-NIV78_RS15630;Dbxref=Genbank:WP_161521140.1;Name=WP_161521140.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877115.1;locus_tag=NIV78_RS15630;product=ABC transporter permease subunit;protein_id=WP_161521140.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3341044 3341838 . - . ID=gene-NIV78_RS15635;Name=NIV78_RS15635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15635 NZ_CP100136.1 Protein Homology CDS 3341044 3341838 . - 0 ID=cds-WP_015877116.1;Parent=gene-NIV78_RS15635;Dbxref=Genbank:WP_015877116.1;Name=WP_015877116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329291.1;locus_tag=NIV78_RS15635;product=ABC transporter ATP-binding protein;protein_id=WP_015877116.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3341835 3342881 . - . ID=gene-NIV78_RS15640;Name=tauA;gbkey=Gene;gene=tauA;gene_biotype=protein_coding;locus_tag=NIV78_RS15640 NZ_CP100136.1 Protein Homology CDS 3341835 3342881 . - 0 ID=cds-WP_017923662.1;Parent=gene-NIV78_RS15640;Dbxref=Genbank:WP_017923662.1;Name=WP_017923662.1;Ontology_term=GO:0015734,GO:0015411,GO:0030977,GO:0030288,GO:0031362,GO:0055052;gbkey=CDS;gene=tauA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,anchored component of external side of plasma membrane|0031362||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type taurine transporter transporter activity|0015411||IEA,taurine binding|0030977||IEA;go_process=taurine transport|0015734||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877117.1;locus_tag=NIV78_RS15640;product=taurine ABC transporter substrate-binding protein;protein_id=WP_017923662.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3343147 3344133 . - . ID=gene-NIV78_RS15645;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=NIV78_RS15645 NZ_CP100136.1 Protein Homology CDS 3343147 3344133 . - 0 ID=cds-WP_015877118.1;Parent=gene-NIV78_RS15645;Dbxref=Genbank:WP_015877118.1;Name=WP_015877118.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601526.1;locus_tag=NIV78_RS15645;product=lipoyl synthase;protein_id=WP_015877118.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3344126 3344878 . - . ID=gene-NIV78_RS15650;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=NIV78_RS15650 NZ_CP100136.1 Protein Homology CDS 3344126 3344878 . - 0 ID=cds-WP_017923663.1;Parent=gene-NIV78_RS15650;Dbxref=Genbank:WP_017923663.1;Name=WP_017923663.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004553813.1;locus_tag=NIV78_RS15650;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_017923663.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3344920 3345243 . - . ID=gene-NIV78_RS15655;Name=NIV78_RS15655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15655 NZ_CP100136.1 Protein Homology CDS 3344920 3345243 . - 0 ID=cds-WP_017424681.1;Parent=gene-NIV78_RS15655;Dbxref=Genbank:WP_017424681.1;Name=WP_017424681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851005.1;locus_tag=NIV78_RS15655;product=DUF2917 domain-containing protein;protein_id=WP_017424681.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3345345 3346346 . + . ID=gene-NIV78_RS15660;Name=NIV78_RS15660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15660 NZ_CP100136.1 Protein Homology CDS 3345345 3346346 . + 0 ID=cds-WP_015877121.1;Parent=gene-NIV78_RS15660;Dbxref=Genbank:WP_015877121.1;Name=WP_015877121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013337882.1;locus_tag=NIV78_RS15660;product=transcriptional regulator GcvA;protein_id=WP_015877121.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3346450 3346758 . - . ID=gene-NIV78_RS15665;Name=NIV78_RS15665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15665 NZ_CP100136.1 Protein Homology CDS 3346450 3346758 . - 0 ID=cds-WP_015877122.1;Parent=gene-NIV78_RS15665;Dbxref=Genbank:WP_015877122.1;Name=WP_015877122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601869.1;locus_tag=NIV78_RS15665;product=YbeD family protein;protein_id=WP_015877122.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3346795 3347706 . - . ID=gene-NIV78_RS15670;Name=NIV78_RS15670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15670 NZ_CP100136.1 Protein Homology CDS 3346795 3347706 . - 0 ID=cds-WP_015877123.1;Parent=gene-NIV78_RS15670;Dbxref=Genbank:WP_015877123.1;Name=WP_015877123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877123.1;locus_tag=NIV78_RS15670;product=D-amino acid aminotransferase;protein_id=WP_015877123.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3347826 3349127 . - . ID=gene-NIV78_RS15675;Name=NIV78_RS15675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15675 NZ_CP100136.1 Protein Homology CDS 3347826 3349127 . - 0 ID=cds-WP_015877124.1;Parent=gene-NIV78_RS15675;Dbxref=Genbank:WP_015877124.1;Name=WP_015877124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877124.1;locus_tag=NIV78_RS15675;product=D-alanyl-D-alanine carboxypeptidase;protein_id=WP_015877124.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3349425 3350057 . - . ID=gene-NIV78_RS15680;Name=NIV78_RS15680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15680 NZ_CP100136.1 Protein Homology CDS 3349425 3350057 . - 0 ID=cds-WP_015877125.1;Parent=gene-NIV78_RS15680;Dbxref=Genbank:WP_015877125.1;Name=WP_015877125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009908400.1;locus_tag=NIV78_RS15680;product=alpha/beta hydrolase;protein_id=WP_015877125.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3350210 3350533 . - . ID=gene-NIV78_RS15685;Name=NIV78_RS15685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15685 NZ_CP100136.1 Protein Homology CDS 3350210 3350533 . - 0 ID=cds-WP_015877126.1;Parent=gene-NIV78_RS15685;Dbxref=Genbank:WP_015877126.1;Name=WP_015877126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877126.1;locus_tag=NIV78_RS15685;product=NAD(P)H-dependent oxidoreductase subunit E;protein_id=WP_015877126.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3350717 3351919 . - . ID=gene-NIV78_RS15690;Name=NIV78_RS15690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15690 NZ_CP100136.1 Protein Homology CDS 3350717 3351919 . - 0 ID=cds-WP_015877127.1;Parent=gene-NIV78_RS15690;Dbxref=Genbank:WP_015877127.1;Name=WP_015877127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699501.1;locus_tag=NIV78_RS15690;product=VanZ family protein;protein_id=WP_015877127.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3351957 3352586 . - . ID=gene-NIV78_RS15695;Name=NIV78_RS15695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15695 NZ_CP100136.1 Protein Homology CDS 3351957 3352586 . - 0 ID=cds-WP_035979920.1;Parent=gene-NIV78_RS15695;Dbxref=Genbank:WP_035979920.1;Name=WP_035979920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467720.1;locus_tag=NIV78_RS15695;product=ABC-type transport auxiliary lipoprotein family protein;protein_id=WP_035979920.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3352813 3353763 . - . ID=gene-NIV78_RS15700;Name=NIV78_RS15700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15700 NZ_CP100136.1 Protein Homology CDS 3352813 3353763 . - 0 ID=cds-WP_015877129.1;Parent=gene-NIV78_RS15700;Dbxref=Genbank:WP_015877129.1;Name=WP_015877129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408952.1;locus_tag=NIV78_RS15700;product=MlaD family protein;protein_id=WP_015877129.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3353779 3354651 . - . ID=gene-NIV78_RS15705;Name=NIV78_RS15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15705 NZ_CP100136.1 Protein Homology CDS 3353779 3354651 . - 0 ID=cds-WP_015877130.1;Parent=gene-NIV78_RS15705;Dbxref=Genbank:WP_015877130.1;Name=WP_015877130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877130.1;locus_tag=NIV78_RS15705;product=ABC transporter ATP-binding protein;protein_id=WP_015877130.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3354651 3355823 . - . ID=gene-NIV78_RS15710;Name=NIV78_RS15710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15710 NZ_CP100136.1 Protein Homology CDS 3354651 3355823 . - 0 ID=cds-WP_015877131.1;Parent=gene-NIV78_RS15710;Dbxref=Genbank:WP_015877131.1;Name=WP_015877131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893228.1;locus_tag=NIV78_RS15710;product=ABC transporter permease;protein_id=WP_015877131.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3356212 3357117 . + . ID=gene-NIV78_RS15715;Name=NIV78_RS15715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15715 NZ_CP100136.1 Protein Homology CDS 3356212 3357117 . + 0 ID=cds-WP_153478107.1;Parent=gene-NIV78_RS15715;Dbxref=Genbank:WP_153478107.1;Name=WP_153478107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877132.1;locus_tag=NIV78_RS15715;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=WP_153478107.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3357114 3357947 . + . ID=gene-NIV78_RS15720;Name=NIV78_RS15720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15720 NZ_CP100136.1 Protein Homology CDS 3357114 3357947 . + 0 ID=cds-WP_124836902.1;Parent=gene-NIV78_RS15720;Dbxref=Genbank:WP_124836902.1;Name=WP_124836902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877133.1;locus_tag=NIV78_RS15720;product=type III pantothenate kinase;protein_id=WP_124836902.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3358017 3358598 . + . ID=gene-NIV78_RS15725;Name=NIV78_RS15725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15725 NZ_CP100136.1 GeneMarkS-2+ CDS 3358017 3358598 . + 0 ID=cds-WP_251107180.1;Parent=gene-NIV78_RS15725;Dbxref=Genbank:WP_251107180.1;Name=WP_251107180.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS15725;product=hypothetical protein;protein_id=WP_251107180.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3358615 3359100 . - . ID=gene-NIV78_RS15730;Name=rfaE2;gbkey=Gene;gene=rfaE2;gene_biotype=protein_coding;locus_tag=NIV78_RS15730 NZ_CP100136.1 Protein Homology CDS 3358615 3359100 . - 0 ID=cds-WP_043227670.1;Parent=gene-NIV78_RS15730;Dbxref=Genbank:WP_043227670.1;Name=WP_043227670.1;Ontology_term=GO:0009244,GO:0016779;gbkey=CDS;gene=rfaE2;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877134.1;locus_tag=NIV78_RS15730;product=D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase;protein_id=WP_043227670.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3359326 3360198 . - . ID=gene-NIV78_RS15735;Name=NIV78_RS15735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15735 NZ_CP100136.1 Protein Homology CDS 3359326 3360198 . - 0 ID=cds-WP_017425313.1;Parent=gene-NIV78_RS15735;Dbxref=Genbank:WP_017425313.1;Name=WP_017425313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334373.1;locus_tag=NIV78_RS15735;product=acyl-ACP desaturase;protein_id=WP_017425313.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3360642 3361916 . - . ID=gene-NIV78_RS15740;Name=NIV78_RS15740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15740 NZ_CP100136.1 Protein Homology CDS 3360642 3361916 . - 0 ID=cds-WP_257757028.1;Parent=gene-NIV78_RS15740;Dbxref=Genbank:WP_257757028.1;Name=WP_257757028.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877136.1;locus_tag=NIV78_RS15740;product=patatin-like phospholipase family protein;protein_id=WP_257757028.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3361947 3362819 . - . ID=gene-NIV78_RS15745;Name=NIV78_RS15745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15745 NZ_CP100136.1 Protein Homology CDS 3361947 3362819 . - 0 ID=cds-WP_100555717.1;Parent=gene-NIV78_RS15745;Dbxref=Genbank:WP_100555717.1;Name=WP_100555717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877137.1;locus_tag=NIV78_RS15745;product=transcriptional regulator;protein_id=WP_100555717.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3363073 3363903 . - . ID=gene-NIV78_RS15750;Name=NIV78_RS15750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15750 NZ_CP100136.1 Protein Homology CDS 3363073 3363903 . - 0 ID=cds-WP_015877138.1;Parent=gene-NIV78_RS15750;Dbxref=Genbank:WP_015877138.1;Name=WP_015877138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877138.1;locus_tag=NIV78_RS15750;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_015877138.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3363969 3364961 . - . ID=gene-NIV78_RS15755;Name=NIV78_RS15755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15755 NZ_CP100136.1 Protein Homology CDS 3363969 3364961 . - 0 ID=cds-WP_015877139.1;Parent=gene-NIV78_RS15755;Dbxref=Genbank:WP_015877139.1;Name=WP_015877139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189282.1;locus_tag=NIV78_RS15755;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_015877139.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3365119 3365952 . + . ID=gene-NIV78_RS15760;Name=NIV78_RS15760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15760 NZ_CP100136.1 Protein Homology CDS 3365119 3365952 . + 0 ID=cds-WP_026051601.1;Parent=gene-NIV78_RS15760;Dbxref=Genbank:WP_026051601.1;Name=WP_026051601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699524.1;locus_tag=NIV78_RS15760;product=IclR family transcriptional regulator;protein_id=WP_026051601.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3366158 3367393 . + . ID=gene-NIV78_RS15765;Name=NIV78_RS15765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15765 NZ_CP100136.1 Protein Homology CDS 3366158 3367393 . + 0 ID=cds-WP_251107181.1;Parent=gene-NIV78_RS15765;Dbxref=Genbank:WP_251107181.1;Name=WP_251107181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877141.1;locus_tag=NIV78_RS15765;product=DUF3108 domain-containing protein;protein_id=WP_251107181.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3367645 3367902 . + . ID=gene-NIV78_RS15770;Name=NIV78_RS15770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15770 NZ_CP100136.1 Protein Homology CDS 3367645 3367902 . + 0 ID=cds-WP_015877142.1;Parent=gene-NIV78_RS15770;Dbxref=Genbank:WP_015877142.1;Name=WP_015877142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398119.1;locus_tag=NIV78_RS15770;product=DUF3567 domain-containing protein;protein_id=WP_015877142.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3368101 3369165 . + . ID=gene-NIV78_RS15775;Name=NIV78_RS15775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15775 NZ_CP100136.1 Protein Homology CDS 3368101 3369165 . + 0 ID=cds-WP_015877143.1;Parent=gene-NIV78_RS15775;Dbxref=Genbank:WP_015877143.1;Name=WP_015877143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398117.1;locus_tag=NIV78_RS15775;product=homocysteine S-methyltransferase family protein;protein_id=WP_015877143.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3369230 3371947 . + . ID=gene-NIV78_RS15780;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=NIV78_RS15780 NZ_CP100136.1 Protein Homology CDS 3369230 3371947 . + 0 ID=cds-WP_017923440.1;Parent=gene-NIV78_RS15780;Dbxref=Genbank:WP_017923440.1;Name=WP_017923440.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009918375.1;locus_tag=NIV78_RS15780;product=methionine synthase;protein_id=WP_017923440.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3372096 3372419 . - . ID=gene-NIV78_RS15785;Name=NIV78_RS15785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15785 NZ_CP100136.1 Protein Homology CDS 3372096 3372419 . - 0 ID=cds-WP_015877145.1;Parent=gene-NIV78_RS15785;Dbxref=Genbank:WP_015877145.1;Name=WP_015877145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334383.1;locus_tag=NIV78_RS15785;product=DUF1840 domain-containing protein;protein_id=WP_015877145.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3372622 3374406 . + . ID=gene-NIV78_RS15790;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=NIV78_RS15790 NZ_CP100136.1 Protein Homology CDS 3372622 3374406 . + 0 ID=cds-WP_015877146.1;Parent=gene-NIV78_RS15790;Dbxref=Genbank:WP_015877146.1;Name=WP_015877146.1;Ontology_term=GO:0006420,GO:0004814,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522947.1;locus_tag=NIV78_RS15790;product=arginine--tRNA ligase;protein_id=WP_015877146.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3374497 3375297 . + . ID=gene-NIV78_RS15795;Name=NIV78_RS15795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15795 NZ_CP100136.1 Protein Homology CDS 3374497 3375297 . + 0 ID=cds-WP_251107182.1;Parent=gene-NIV78_RS15795;Dbxref=Genbank:WP_251107182.1;Name=WP_251107182.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011401740.1;locus_tag=NIV78_RS15795;product=SPOR domain-containing protein;protein_id=WP_251107182.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3375345 3375983 . + . ID=gene-NIV78_RS15800;Name=NIV78_RS15800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15800 NZ_CP100136.1 Protein Homology CDS 3375345 3375983 . + 0 ID=cds-WP_015877148.1;Parent=gene-NIV78_RS15800;Dbxref=Genbank:WP_015877148.1;Name=WP_015877148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190112.1;locus_tag=NIV78_RS15800;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=WP_015877148.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3376012 3376794 . + . ID=gene-NIV78_RS15805;Name=NIV78_RS15805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15805 NZ_CP100136.1 Protein Homology CDS 3376012 3376794 . + 0 ID=cds-WP_161521145.1;Parent=gene-NIV78_RS15805;Dbxref=Genbank:WP_161521145.1;Name=WP_161521145.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877149.1;locus_tag=NIV78_RS15805;product=SDR family oxidoreductase;protein_id=WP_161521145.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3376997 3378583 . + . ID=gene-NIV78_RS15810;Name=NIV78_RS15810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15810 NZ_CP100136.1 Protein Homology CDS 3376997 3378583 . + 0 ID=cds-WP_017924546.1;Parent=gene-NIV78_RS15810;Dbxref=Genbank:WP_017924546.1;Name=WP_017924546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893270.1;locus_tag=NIV78_RS15810;product=ABC transporter substrate-binding protein;protein_id=WP_017924546.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3378646 3379737 . - . ID=gene-NIV78_RS15815;Name=NIV78_RS15815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15815 NZ_CP100136.1 Protein Homology CDS 3378646 3379737 . - 0 ID=cds-WP_017924775.1;Parent=gene-NIV78_RS15815;Dbxref=Genbank:WP_017924775.1;Name=WP_017924775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877151.1;locus_tag=NIV78_RS15815;product=MBL fold metallo-hydrolase;protein_id=WP_017924775.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3380071 3381879 . + . ID=gene-NIV78_RS15820;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=NIV78_RS15820 NZ_CP100136.1 Protein Homology CDS 3380071 3381879 . + 0 ID=cds-WP_017923735.1;Parent=gene-NIV78_RS15820;Dbxref=Genbank:WP_017923735.1;Name=WP_017923735.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877152.1;locus_tag=NIV78_RS15820;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_017923735.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3381920 3382690 . + . ID=gene-NIV78_RS15825;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=NIV78_RS15825 NZ_CP100136.1 Protein Homology CDS 3381920 3382690 . + 0 ID=cds-WP_017923736.1;Parent=gene-NIV78_RS15825;Dbxref=Genbank:WP_017923736.1;Name=WP_017923736.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004550949.1;locus_tag=NIV78_RS15825;product=carbonate dehydratase;protein_id=WP_017923736.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3382677 3383870 . + . ID=gene-NIV78_RS15830;Name=NIV78_RS15830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15830 NZ_CP100136.1 Protein Homology CDS 3382677 3383870 . + 0 ID=cds-WP_015877154.1;Parent=gene-NIV78_RS15830;Dbxref=Genbank:WP_015877154.1;Name=WP_015877154.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877154.1;locus_tag=NIV78_RS15830;product=acetyl-CoA C-acetyltransferase;protein_id=WP_015877154.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3383896 3384573 . + . ID=gene-NIV78_RS15835;Name=NIV78_RS15835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15835 NZ_CP100136.1 Protein Homology CDS 3383896 3384573 . + 0 ID=cds-WP_015877155.1;Parent=gene-NIV78_RS15835;Dbxref=Genbank:WP_015877155.1;Name=WP_015877155.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895885.1;locus_tag=NIV78_RS15835;product=SDR family oxidoreductase;protein_id=WP_015877155.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3384579 3385043 . + . ID=gene-NIV78_RS15840;Name=NIV78_RS15840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15840 NZ_CP100136.1 Protein Homology CDS 3384579 3385043 . + 0 ID=cds-WP_124836907.1;Parent=gene-NIV78_RS15840;Dbxref=Genbank:WP_124836907.1;Name=WP_124836907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877156.1;locus_tag=NIV78_RS15840;product=YchJ family protein;protein_id=WP_124836907.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3385151 3386392 . + . ID=gene-NIV78_RS15845;Name=NIV78_RS15845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15845 NZ_CP100136.1 Protein Homology CDS 3385151 3386392 . + 0 ID=cds-WP_251107183.1;Parent=gene-NIV78_RS15845;Dbxref=Genbank:WP_251107183.1;Name=WP_251107183.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877157.1;locus_tag=NIV78_RS15845;product=prolyl oligopeptidase family serine peptidase;protein_id=WP_251107183.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3387012 3388355 . + . ID=gene-NIV78_RS15850;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=NIV78_RS15850 NZ_CP100136.1 Protein Homology CDS 3387012 3388355 . + 0 ID=cds-WP_017923708.1;Parent=gene-NIV78_RS15850;Dbxref=Genbank:WP_017923708.1;Name=WP_017923708.1;Ontology_term=GO:0009102,GO:0004015;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877158.1;locus_tag=NIV78_RS15850;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_017923708.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3388352 3389554 . + . ID=gene-NIV78_RS15855;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=NIV78_RS15855 NZ_CP100136.1 Protein Homology CDS 3388352 3389554 . + 0 ID=cds-WP_015877159.1;Parent=gene-NIV78_RS15855;Dbxref=Genbank:WP_015877159.1;Name=WP_015877159.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699543.1;locus_tag=NIV78_RS15855;product=8-amino-7-oxononanoate synthase;protein_id=WP_015877159.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3389551 3390303 . + . ID=gene-NIV78_RS15860;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=NIV78_RS15860 NZ_CP100136.1 Protein Homology CDS 3389551 3390303 . + 0 ID=cds-WP_017922775.1;Parent=gene-NIV78_RS15860;Dbxref=Genbank:WP_017922775.1;Name=WP_017922775.1;Ontology_term=GO:0009102,GO:0004141;gbkey=CDS;gene=bioD;go_function=dethiobiotin synthase activity|0004141||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877160.1;locus_tag=NIV78_RS15860;product=dethiobiotin synthase;protein_id=WP_017922775.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3390339 3391418 . + . ID=gene-NIV78_RS15865;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=NIV78_RS15865 NZ_CP100136.1 Protein Homology CDS 3390339 3391418 . + 0 ID=cds-WP_017922776.1;Parent=gene-NIV78_RS15865;Dbxref=Genbank:WP_017922776.1;Name=WP_017922776.1;Ontology_term=GO:0009102,GO:0004076,GO:0051537,GO:0051539,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423869.1;locus_tag=NIV78_RS15865;product=biotin synthase BioB;protein_id=WP_017922776.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3391537 3392244 . - . ID=gene-NIV78_RS15870;Name=NIV78_RS15870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15870 NZ_CP100136.1 Protein Homology CDS 3391537 3392244 . - 0 ID=cds-WP_015877162.1;Parent=gene-NIV78_RS15870;Dbxref=Genbank:WP_015877162.1;Name=WP_015877162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423870.1;locus_tag=NIV78_RS15870;product=copper homeostasis protein CutC;protein_id=WP_015877162.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3392834 3393172 . - . ID=gene-NIV78_RS15875;Name=NIV78_RS15875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15875 NZ_CP100136.1 Protein Homology CDS 3392834 3393172 . - 0 ID=cds-WP_080630159.1;Parent=gene-NIV78_RS15875;Dbxref=Genbank:WP_080630159.1;Name=WP_080630159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011493048.1;locus_tag=NIV78_RS15875;product=DUF2489 domain-containing protein;protein_id=WP_080630159.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3393186 3397730 . - . ID=gene-NIV78_RS15880;Name=NIV78_RS15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15880 NZ_CP100136.1 Protein Homology CDS 3393186 3397730 . - 0 ID=cds-WP_257757035.1;Parent=gene-NIV78_RS15880;Dbxref=Genbank:WP_257757035.1;Name=WP_257757035.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024728.2;locus_tag=NIV78_RS15880;product=hemagglutinin repeat-containing protein;protein_id=WP_257757035.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3397634 3398845 . - . ID=gene-NIV78_RS15885;Name=NIV78_RS15885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15885 NZ_CP100136.1 GeneMarkS-2+ CDS 3397634 3398845 . - 0 ID=cds-WP_241766805.1;Parent=gene-NIV78_RS15885;Dbxref=Genbank:WP_241766805.1;Name=WP_241766805.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS15885;product=hypothetical protein;protein_id=WP_241766805.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3398897 3400231 . - . ID=gene-NIV78_RS15890;Name=NIV78_RS15890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15890 NZ_CP100136.1 Protein Homology CDS 3398897 3400231 . - 0 ID=cds-WP_017922777.1;Parent=gene-NIV78_RS15890;Dbxref=Genbank:WP_017922777.1;Name=WP_017922777.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015803.2;locus_tag=NIV78_RS15890;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_017922777.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3400863 3402152 . - . ID=gene-NIV78_RS15895;Name=NIV78_RS15895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15895 NZ_CP100136.1 Protein Homology CDS 3400863 3402152 . - 0 ID=cds-WP_026051737.1;Parent=gene-NIV78_RS15895;Dbxref=Genbank:WP_026051737.1;Name=WP_026051737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334436.1;locus_tag=NIV78_RS15895;product=EAL domain-containing protein;protein_id=WP_026051737.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3402434 3404107 . + . ID=gene-NIV78_RS15900;Name=NIV78_RS15900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15900 NZ_CP100136.1 Protein Homology CDS 3402434 3404107 . + 0 ID=cds-WP_015877168.1;Parent=gene-NIV78_RS15900;Dbxref=Genbank:WP_015877168.1;Name=WP_015877168.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385;gbkey=CDS;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009902467.1;locus_tag=NIV78_RS15900;product=Na+/H+ antiporter;protein_id=WP_015877168.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3404192 3407767 . - . ID=gene-NIV78_RS15905;Name=NIV78_RS15905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15905 NZ_CP100136.1 Protein Homology CDS 3404192 3407767 . - 0 ID=cds-WP_251107185.1;Parent=gene-NIV78_RS15905;Dbxref=Genbank:WP_251107185.1;Name=WP_251107185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353392.1;locus_tag=NIV78_RS15905;product=indolepyruvate ferredoxin oxidoreductase family protein;protein_id=WP_251107185.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3408076 3409095 . - . ID=gene-NIV78_RS15910;Name=NIV78_RS15910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15910 NZ_CP100136.1 Protein Homology CDS 3408076 3409095 . - 0 ID=cds-WP_015877170.1;Parent=gene-NIV78_RS15910;Dbxref=Genbank:WP_015877170.1;Name=WP_015877170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004541145.1;locus_tag=NIV78_RS15910;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_015877170.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3409575 3410807 . + . ID=gene-NIV78_RS15915;Name=NIV78_RS15915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15915 NZ_CP100136.1 Protein Homology CDS 3409575 3410807 . + 0 ID=cds-WP_017923629.1;Parent=gene-NIV78_RS15915;Dbxref=Genbank:WP_017923629.1;Name=WP_017923629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877171.1;locus_tag=NIV78_RS15915;product=glycoside hydrolase family 64 protein;protein_id=WP_017923629.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 3410841 3410966 . + . ID=gene-NIV78_RS15920;Name=NIV78_RS15920;end_range=3410966,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS15920;partial=true;pseudo=true;start_range=.,3410841 NZ_CP100136.1 Protein Homology CDS 3410841 3410966 . + 0 ID=cds-NIV78_RS15920;Parent=gene-NIV78_RS15920;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0016829;end_range=3410966,.;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214255.1;locus_tag=NIV78_RS15920;partial=true;product=dihydrodipicolinate synthase family protein;pseudo=true;start_range=.,3410841;transl_table=11 NZ_CP100136.1 RefSeq gene 3411232 3411684 . + . ID=gene-NIV78_RS15925;Name=NIV78_RS15925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15925 NZ_CP100136.1 GeneMarkS-2+ CDS 3411232 3411684 . + 0 ID=cds-WP_230674459.1;Parent=gene-NIV78_RS15925;Dbxref=Genbank:WP_230674459.1;Name=WP_230674459.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS15925;product=hypothetical protein;protein_id=WP_230674459.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3411797 3412429 . - . ID=gene-NIV78_RS15930;Name=NIV78_RS15930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15930 NZ_CP100136.1 Protein Homology CDS 3411797 3412429 . - 0 ID=cds-WP_251107186.1;Parent=gene-NIV78_RS15930;Dbxref=Genbank:WP_251107186.1;Name=WP_251107186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877172.1;locus_tag=NIV78_RS15930;product=alpha/beta fold hydrolase;protein_id=WP_251107186.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3412616 3413572 . + . ID=gene-NIV78_RS15935;Name=NIV78_RS15935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15935 NZ_CP100136.1 Protein Homology CDS 3412616 3413572 . + 0 ID=cds-WP_015877173.1;Parent=gene-NIV78_RS15935;Dbxref=Genbank:WP_015877173.1;Name=WP_015877173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004536079.1;locus_tag=NIV78_RS15935;product=glyoxylate/hydroxypyruvate reductase A;protein_id=WP_015877173.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3413717 3414643 . + . ID=gene-NIV78_RS15940;Name=NIV78_RS15940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15940 NZ_CP100136.1 Protein Homology CDS 3413717 3414643 . + 0 ID=cds-WP_015877174.1;Parent=gene-NIV78_RS15940;Dbxref=Genbank:WP_015877174.1;Name=WP_015877174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877174.1;locus_tag=NIV78_RS15940;product=hydroxymethylglutaryl-CoA lyase;protein_id=WP_015877174.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3414685 3415200 . + . ID=gene-NIV78_RS15945;Name=NIV78_RS15945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15945 NZ_CP100136.1 Protein Homology CDS 3414685 3415200 . + 0 ID=cds-WP_015877175.1;Parent=gene-NIV78_RS15945;Dbxref=Genbank:WP_015877175.1;Name=WP_015877175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425373.1;locus_tag=NIV78_RS15945;product=YbaK/EbsC family protein;protein_id=WP_015877175.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3415197 3415460 . + . ID=gene-NIV78_RS15950;Name=NIV78_RS15950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15950 NZ_CP100136.1 Protein Homology CDS 3415197 3415460 . + 0 ID=cds-WP_017924336.1;Parent=gene-NIV78_RS15950;Dbxref=Genbank:WP_017924336.1;Name=WP_017924336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877176.1;locus_tag=NIV78_RS15950;product=DUF1289 domain-containing protein;protein_id=WP_017924336.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3415795 3416691 . - . ID=gene-NIV78_RS15955;Name=NIV78_RS15955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15955 NZ_CP100136.1 Protein Homology CDS 3415795 3416691 . - 0 ID=cds-WP_015877177.1;Parent=gene-NIV78_RS15955;Dbxref=Genbank:WP_015877177.1;Name=WP_015877177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877177.1;locus_tag=NIV78_RS15955;product=alpha/beta hydrolase;protein_id=WP_015877177.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3416981 3417940 . + . ID=gene-NIV78_RS15960;Name=NIV78_RS15960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15960 NZ_CP100136.1 Protein Homology CDS 3416981 3417940 . + 0 ID=cds-WP_015877178.1;Parent=gene-NIV78_RS15960;Dbxref=Genbank:WP_015877178.1;Name=WP_015877178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877178.1;locus_tag=NIV78_RS15960;product=nitronate monooxygenase family protein;protein_id=WP_015877178.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3418097 3419065 . - . ID=gene-NIV78_RS15965;Name=NIV78_RS15965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15965 NZ_CP100136.1 Protein Homology CDS 3418097 3419065 . - 0 ID=cds-WP_017424839.1;Parent=gene-NIV78_RS15965;Dbxref=Genbank:WP_017424839.1;Name=WP_017424839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424839.1;locus_tag=NIV78_RS15965;product=LysR family transcriptional regulator;protein_id=WP_017424839.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3419232 3420299 . - . ID=gene-NIV78_RS15970;Name=NIV78_RS15970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15970 NZ_CP100136.1 Protein Homology CDS 3419232 3420299 . - 0 ID=cds-WP_015877180.1;Parent=gene-NIV78_RS15970;Dbxref=Genbank:WP_015877180.1;Name=WP_015877180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407148.1;locus_tag=NIV78_RS15970;product=porin;protein_id=WP_015877180.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3420662 3421087 . - . ID=gene-NIV78_RS15975;Name=NIV78_RS15975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15975 NZ_CP100136.1 Protein Homology CDS 3420662 3421087 . - 0 ID=cds-WP_045678854.1;Parent=gene-NIV78_RS15975;Dbxref=Genbank:WP_045678854.1;Name=WP_045678854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353418.1;locus_tag=NIV78_RS15975;product=hypothetical protein;protein_id=WP_045678854.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3421529 3422554 . + . ID=gene-NIV78_RS15980;Name=NIV78_RS15980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15980 NZ_CP100136.1 Protein Homology CDS 3421529 3422554 . + 0 ID=cds-WP_017923983.1;Parent=gene-NIV78_RS15980;Dbxref=Genbank:WP_017923983.1;Name=WP_017923983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329356.1;locus_tag=NIV78_RS15980;product=bile acid:sodium symporter;protein_id=WP_017923983.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3422791 3424638 . + . ID=gene-NIV78_RS15985;Name=NIV78_RS15985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15985 NZ_CP100136.1 Protein Homology CDS 3422791 3424638 . + 0 ID=cds-WP_015877183.1;Parent=gene-NIV78_RS15985;Dbxref=Genbank:WP_015877183.1;Name=WP_015877183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699579.1;locus_tag=NIV78_RS15985;product=phosphodiesterase;protein_id=WP_015877183.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3424951 3425970 . + . ID=gene-NIV78_RS15990;Name=NIV78_RS15990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15990 NZ_CP100136.1 Protein Homology CDS 3424951 3425970 . + 0 ID=cds-WP_015877184.1;Parent=gene-NIV78_RS15990;Dbxref=Genbank:WP_015877184.1;Name=WP_015877184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024290.1;locus_tag=NIV78_RS15990;product=LacI family transcriptional regulator;protein_id=WP_015877184.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3425967 3427244 . + . ID=gene-NIV78_RS15995;Name=NIV78_RS15995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS15995 NZ_CP100136.1 Protein Homology CDS 3425967 3427244 . + 0 ID=cds-WP_015877185.1;Parent=gene-NIV78_RS15995;Dbxref=Genbank:WP_015877185.1;Name=WP_015877185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877185.1;locus_tag=NIV78_RS15995;product=AGE family epimerase/isomerase;protein_id=WP_015877185.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3427244 3428167 . + . ID=gene-NIV78_RS16000;Name=NIV78_RS16000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16000 NZ_CP100136.1 Protein Homology CDS 3427244 3428167 . + 0 ID=cds-WP_026051771.1;Parent=gene-NIV78_RS16000;Dbxref=Genbank:WP_026051771.1;Name=WP_026051771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877186.1;locus_tag=NIV78_RS16000;product=carbohydrate kinase;protein_id=WP_026051771.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3428268 3428489 . + . ID=gene-NIV78_RS16005;Name=NIV78_RS16005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16005 NZ_CP100136.1 Protein Homology CDS 3428268 3428489 . + 0 ID=cds-WP_015877187.1;Parent=gene-NIV78_RS16005;Dbxref=Genbank:WP_015877187.1;Name=WP_015877187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877187.1;locus_tag=NIV78_RS16005;product=hypothetical protein;protein_id=WP_015877187.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3428551 3428745 . - . ID=gene-NIV78_RS16010;Name=NIV78_RS16010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16010 NZ_CP100136.1 Protein Homology CDS 3428551 3428745 . - 0 ID=cds-WP_017425175.1;Parent=gene-NIV78_RS16010;Dbxref=Genbank:WP_017425175.1;Name=WP_017425175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893351.1;locus_tag=NIV78_RS16010;product=DUF2905 domain-containing protein;protein_id=WP_017425175.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3428761 3429969 . - . ID=gene-NIV78_RS16015;Name=NIV78_RS16015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16015 NZ_CP100136.1 Protein Homology CDS 3428761 3429969 . - 0 ID=cds-WP_251107187.1;Parent=gene-NIV78_RS16015;Dbxref=Genbank:WP_251107187.1;Name=WP_251107187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546378.1;locus_tag=NIV78_RS16015;product=SAM-dependent methyltransferase;protein_id=WP_251107187.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3429983 3430774 . + . ID=gene-NIV78_RS16020;Name=NIV78_RS16020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16020 NZ_CP100136.1 Protein Homology CDS 3429983 3430774 . + 0 ID=cds-WP_251107188.1;Parent=gene-NIV78_RS16020;Dbxref=Genbank:WP_251107188.1;Name=WP_251107188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877190.1;locus_tag=NIV78_RS16020;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_251107188.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3430818 3431222 . + . ID=gene-NIV78_RS16025;Name=NIV78_RS16025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16025 NZ_CP100136.1 Protein Homology CDS 3430818 3431222 . + 0 ID=cds-WP_017923139.1;Parent=gene-NIV78_RS16025;Dbxref=Genbank:WP_017923139.1;Name=WP_017923139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893357.1;locus_tag=NIV78_RS16025;product=dihydroneopterin aldolase;protein_id=WP_017923139.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3431219 3432208 . + . ID=gene-NIV78_RS16030;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=NIV78_RS16030 NZ_CP100136.1 Protein Homology CDS 3431219 3432208 . + 0 ID=cds-WP_015877192.1;Parent=gene-NIV78_RS16030;Dbxref=Genbank:WP_015877192.1;Name=WP_015877192.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024282.1;locus_tag=NIV78_RS16030;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_015877192.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3432341 3433702 . + . ID=gene-NIV78_RS16035;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=NIV78_RS16035 NZ_CP100136.1 Protein Homology CDS 3432341 3433702 . + 0 ID=cds-WP_015877193.1;Parent=gene-NIV78_RS16035;Dbxref=Genbank:WP_015877193.1;Name=WP_015877193.1;Ontology_term=GO:0009103,GO:0009252,GO:0003977,GO:0019134,GO:0005737;gbkey=CDS;gene=glmU;go_component=cytoplasm|0005737||IEA;go_function=UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353430.1;locus_tag=NIV78_RS16035;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_015877193.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3433779 3435596 . + . ID=gene-NIV78_RS16040;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=NIV78_RS16040 NZ_CP100136.1 Protein Homology CDS 3433779 3435596 . + 0 ID=cds-WP_257757038.1;Parent=gene-NIV78_RS16040;Dbxref=Genbank:WP_257757038.1;Name=WP_257757038.1;Ontology_term=GO:0006040,GO:0009252,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011000145.1;locus_tag=NIV78_RS16040;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_257757038.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3435852 3436313 . + . ID=gene-NIV78_RS16045;Name=NIV78_RS16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16045 NZ_CP100136.1 Protein Homology CDS 3435852 3436313 . + 0 ID=cds-WP_015877195.1;Parent=gene-NIV78_RS16045;Dbxref=Genbank:WP_015877195.1;Name=WP_015877195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877195.1;locus_tag=NIV78_RS16045;product=GNAT family N-acetyltransferase;protein_id=WP_015877195.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3436374 3438545 . - . ID=gene-NIV78_RS16050;Name=NIV78_RS16050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16050 NZ_CP100136.1 GeneMarkS-2+ CDS 3436374 3438545 . - 0 ID=cds-WP_171466694.1;Parent=gene-NIV78_RS16050;Dbxref=Genbank:WP_171466694.1;Name=WP_171466694.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS16050;product=hypothetical protein;protein_id=WP_171466694.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3438740 3439105 . + . ID=gene-NIV78_RS16055;Name=NIV78_RS16055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16055 NZ_CP100136.1 Protein Homology CDS 3438740 3439105 . + 0 ID=cds-WP_232734537.1;Parent=gene-NIV78_RS16055;Dbxref=Genbank:WP_232734537.1;Name=WP_232734537.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018684.2;locus_tag=NIV78_RS16055;product=lysozyme inhibitor LprI family protein;protein_id=WP_232734537.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3439062 3439436 . - . ID=gene-NIV78_RS16060;Name=NIV78_RS16060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16060 NZ_CP100136.1 Protein Homology CDS 3439062 3439436 . - 0 ID=cds-WP_015877197.1;Parent=gene-NIV78_RS16060;Dbxref=Genbank:WP_015877197.1;Name=WP_015877197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877197.1;locus_tag=NIV78_RS16060;product=DUF779 domain-containing protein;protein_id=WP_015877197.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3439649 3440194 . - . ID=gene-NIV78_RS16065;Name=NIV78_RS16065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16065 NZ_CP100136.1 Protein Homology CDS 3439649 3440194 . - 0 ID=cds-WP_017923785.1;Parent=gene-NIV78_RS16065;Dbxref=Genbank:WP_017923785.1;Name=WP_017923785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423797.1;locus_tag=NIV78_RS16065;product=hypothetical protein;protein_id=WP_017923785.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3440358 3441698 . - . ID=gene-NIV78_RS16070;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=NIV78_RS16070 NZ_CP100136.1 Protein Homology CDS 3440358 3441698 . - 0 ID=cds-WP_257757041.1;Parent=gene-NIV78_RS16070;Dbxref=Genbank:WP_257757041.1;Name=WP_257757041.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881448.1;locus_tag=NIV78_RS16070;product=argininosuccinate synthase;protein_id=WP_257757041.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3441939 3442313 . + . ID=gene-NIV78_RS16075;Name=NIV78_RS16075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16075 NZ_CP100136.1 Protein Homology CDS 3441939 3442313 . + 0 ID=cds-WP_015877200.1;Parent=gene-NIV78_RS16075;Dbxref=Genbank:WP_015877200.1;Name=WP_015877200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699618.1;locus_tag=NIV78_RS16075;product=hypothetical protein;protein_id=WP_015877200.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3442419 3443342 . + . ID=gene-NIV78_RS16080;Name=NIV78_RS16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16080 NZ_CP100136.1 Protein Homology CDS 3442419 3443342 . + 0 ID=cds-WP_017423798.1;Parent=gene-NIV78_RS16080;Dbxref=Genbank:WP_017423798.1;Name=WP_017423798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423798.1;locus_tag=NIV78_RS16080;product=LysR family transcriptional regulator;protein_id=WP_017423798.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3443353 3444027 . + . ID=gene-NIV78_RS16085;Name=NIV78_RS16085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16085 NZ_CP100136.1 Protein Homology CDS 3443353 3444027 . + 0 ID=cds-WP_015877202.1;Parent=gene-NIV78_RS16085;Dbxref=Genbank:WP_015877202.1;Name=WP_015877202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478810.1;locus_tag=NIV78_RS16085;product=response regulator transcription factor;protein_id=WP_015877202.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3444289 3447534 . + . ID=gene-NIV78_RS16090;Name=NIV78_RS16090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16090 NZ_CP100136.1 Protein Homology CDS 3444289 3447534 . + 0 ID=cds-WP_017923630.1;Parent=gene-NIV78_RS16090;Dbxref=Genbank:WP_017923630.1;Name=WP_017923630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699621.1;locus_tag=NIV78_RS16090;product=efflux RND transporter permease subunit;protein_id=WP_017923630.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3447524 3448735 . + . ID=gene-NIV78_RS16095;Name=NIV78_RS16095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16095 NZ_CP100136.1 Protein Homology CDS 3447524 3448735 . + 0 ID=cds-WP_017423278.1;Parent=gene-NIV78_RS16095;Dbxref=Genbank:WP_017423278.1;Name=WP_017423278.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478808.1;locus_tag=NIV78_RS16095;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_017423278.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3448728 3450233 . + . ID=gene-NIV78_RS16100;Name=NIV78_RS16100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16100 NZ_CP100136.1 Protein Homology CDS 3448728 3450233 . + 0 ID=cds-WP_257757042.1;Parent=gene-NIV78_RS16100;Dbxref=Genbank:WP_257757042.1;Name=WP_257757042.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877205.1;locus_tag=NIV78_RS16100;product=efflux transporter outer membrane subunit;protein_id=WP_257757042.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3450334 3453276 . - . ID=gene-NIV78_RS16105;Name=NIV78_RS16105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16105 NZ_CP100136.1 Protein Homology CDS 3450334 3453276 . - 0 ID=cds-WP_230674386.1;Parent=gene-NIV78_RS16105;Dbxref=Genbank:WP_230674386.1;Name=WP_230674386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877206.1;locus_tag=NIV78_RS16105;product=HD domain-containing protein;protein_id=WP_230674386.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3453688 3454860 . - . ID=gene-NIV78_RS16110;Name=NIV78_RS16110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16110 NZ_CP100136.1 Protein Homology CDS 3453688 3454860 . - 0 ID=cds-WP_015877207.1;Parent=gene-NIV78_RS16110;Dbxref=Genbank:WP_015877207.1;Name=WP_015877207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877207.1;locus_tag=NIV78_RS16110;product=porin;protein_id=WP_015877207.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3455181 3455465 . + . ID=gene-NIV78_RS16115;Name=NIV78_RS16115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16115 NZ_CP100136.1 Protein Homology CDS 3455181 3455465 . + 0 ID=cds-WP_017433685.1;Parent=gene-NIV78_RS16115;Dbxref=Genbank:WP_017433685.1;Name=WP_017433685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425143.1;locus_tag=NIV78_RS16115;product=DUF4148 domain-containing protein;protein_id=WP_017433685.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3455535 3455690 . + . ID=gene-NIV78_RS16120;Name=NIV78_RS16120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16120 NZ_CP100136.1 Protein Homology CDS 3455535 3455690 . + 0 ID=cds-WP_015877209.1;Parent=gene-NIV78_RS16120;Dbxref=Genbank:WP_015877209.1;Name=WP_015877209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699628.1;locus_tag=NIV78_RS16120;product=hypothetical protein;protein_id=WP_015877209.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3455791 3456474 . - . ID=gene-NIV78_RS16125;Name=NIV78_RS16125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16125 NZ_CP100136.1 Protein Homology CDS 3455791 3456474 . - 0 ID=cds-WP_015877210.1;Parent=gene-NIV78_RS16125;Dbxref=Genbank:WP_015877210.1;Name=WP_015877210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877210.1;locus_tag=NIV78_RS16125;product=response regulator transcription factor;protein_id=WP_015877210.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3456521 3457834 . - . ID=gene-NIV78_RS16130;Name=NIV78_RS16130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16130 NZ_CP100136.1 Protein Homology CDS 3456521 3457834 . - 0 ID=cds-WP_051071189.1;Parent=gene-NIV78_RS16130;Dbxref=Genbank:WP_051071189.1;Name=WP_051071189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699630.1;locus_tag=NIV78_RS16130;product=HAMP domain-containing histidine kinase;protein_id=WP_051071189.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3457926 3458603 . - . ID=gene-NIV78_RS16135;Name=NIV78_RS16135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16135 NZ_CP100136.1 Protein Homology CDS 3457926 3458603 . - 0 ID=cds-WP_015877212.1;Parent=gene-NIV78_RS16135;Dbxref=Genbank:WP_015877212.1;Name=WP_015877212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877212.1;locus_tag=NIV78_RS16135;product=response regulator transcription factor;protein_id=WP_015877212.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3458853 3459098 . - . ID=gene-NIV78_RS16140;Name=NIV78_RS16140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16140 NZ_CP100136.1 GeneMarkS-2+ CDS 3458853 3459098 . - 0 ID=cds-WP_232734539.1;Parent=gene-NIV78_RS16140;Dbxref=Genbank:WP_232734539.1;Name=WP_232734539.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS16140;product=hypothetical protein;protein_id=WP_232734539.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3459405 3459737 . + . ID=gene-NIV78_RS16145;Name=NIV78_RS16145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16145 NZ_CP100136.1 Protein Homology CDS 3459405 3459737 . + 0 ID=cds-WP_015877213.1;Parent=gene-NIV78_RS16145;Dbxref=Genbank:WP_015877213.1;Name=WP_015877213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699632.1;locus_tag=NIV78_RS16145;product=DUF4148 domain-containing protein;protein_id=WP_015877213.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3459821 3461182 . - . ID=gene-NIV78_RS16150;Name=gor;gbkey=Gene;gene=gor;gene_biotype=protein_coding;locus_tag=NIV78_RS16150 NZ_CP100136.1 Protein Homology CDS 3459821 3461182 . - 0 ID=cds-WP_017924651.1;Parent=gene-NIV78_RS16150;Dbxref=Genbank:WP_017924651.1;Name=WP_017924651.1;Ontology_term=GO:0045454,GO:0004362;gbkey=CDS;gene=gor;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893387.1;locus_tag=NIV78_RS16150;product=glutathione-disulfide reductase;protein_id=WP_017924651.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3461472 3462602 . - . ID=gene-NIV78_RS16155;Name=NIV78_RS16155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16155 NZ_CP100136.1 Protein Homology CDS 3461472 3462602 . - 0 ID=cds-WP_015877215.1;Parent=gene-NIV78_RS16155;Dbxref=Genbank:WP_015877215.1;Name=WP_015877215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004554083.1;locus_tag=NIV78_RS16155;product=porin;protein_id=WP_015877215.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3462840 3463367 . - . ID=gene-NIV78_RS16160;Name=NIV78_RS16160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16160 NZ_CP100136.1 Protein Homology CDS 3462840 3463367 . - 0 ID=cds-WP_017924995.1;Parent=gene-NIV78_RS16160;Dbxref=Genbank:WP_017924995.1;Name=WP_017924995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877216.1;locus_tag=NIV78_RS16160;product=chromate transporter;protein_id=WP_017924995.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3463364 3463948 . - . ID=gene-NIV78_RS16165;Name=NIV78_RS16165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16165 NZ_CP100136.1 Protein Homology CDS 3463364 3463948 . - 0 ID=cds-WP_251107190.1;Parent=gene-NIV78_RS16165;Dbxref=Genbank:WP_251107190.1;Name=WP_251107190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423614.1;locus_tag=NIV78_RS16165;product=chromate transporter;protein_id=WP_251107190.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3464050 3464928 . + . ID=gene-NIV78_RS16170;Name=NIV78_RS16170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16170 NZ_CP100136.1 Protein Homology CDS 3464050 3464928 . + 0 ID=cds-WP_124836228.1;Parent=gene-NIV78_RS16170;Dbxref=Genbank:WP_124836228.1;Name=WP_124836228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019256130.1;locus_tag=NIV78_RS16170;product=transcriptional regulator GcvA;protein_id=WP_124836228.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3464950 3466254 . - . ID=gene-NIV78_RS16175;Name=NIV78_RS16175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16175 NZ_CP100136.1 Protein Homology CDS 3464950 3466254 . - 0 ID=cds-WP_015877219.1;Parent=gene-NIV78_RS16175;Dbxref=Genbank:WP_015877219.1;Name=WP_015877219.1;Ontology_term=GO:0015851,GO:0015205,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004542894.1;locus_tag=NIV78_RS16175;product=NCS2 family nucleobase:cation symporter;protein_id=WP_015877219.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3466647 3467876 . - . ID=gene-NIV78_RS16180;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=NIV78_RS16180 NZ_CP100136.1 Protein Homology CDS 3466647 3467876 . - 0 ID=cds-WP_015877220.1;Parent=gene-NIV78_RS16180;Dbxref=Genbank:WP_015877220.1;Name=WP_015877220.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877220.1;locus_tag=NIV78_RS16180;product=flagellar hook-associated protein FlgL;protein_id=WP_015877220.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3467894 3469888 . - . ID=gene-NIV78_RS16185;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=NIV78_RS16185 NZ_CP100136.1 Protein Homology CDS 3467894 3469888 . - 0 ID=cds-WP_015877221.1;Parent=gene-NIV78_RS16185;Dbxref=Genbank:WP_015877221.1;Name=WP_015877221.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601449.1;locus_tag=NIV78_RS16185;product=flagellar hook-associated protein FlgK;protein_id=WP_015877221.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3470014 3470766 . - . ID=gene-NIV78_RS16190;Name=NIV78_RS16190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16190 NZ_CP100136.1 Protein Homology CDS 3470014 3470766 . - 0 ID=cds-WP_015877222.1;Parent=gene-NIV78_RS16190;Dbxref=Genbank:WP_015877222.1;Name=WP_015877222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877222.1;locus_tag=NIV78_RS16190;product=flagellar brake protein;protein_id=WP_015877222.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3471022 3472011 . - . ID=gene-NIV78_RS16195;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=NIV78_RS16195 NZ_CP100136.1 Protein Homology CDS 3471022 3472011 . - 0 ID=cds-WP_015877223.1;Parent=gene-NIV78_RS16195;Dbxref=Genbank:WP_015877223.1;Name=WP_015877223.1;Ontology_term=GO:0001539,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699644.1;locus_tag=NIV78_RS16195;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_015877223.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3472011 3473198 . - . ID=gene-NIV78_RS16200;Name=NIV78_RS16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16200 NZ_CP100136.1 Protein Homology CDS 3472011 3473198 . - 0 ID=cds-WP_015877224.1;Parent=gene-NIV78_RS16200;Dbxref=Genbank:WP_015877224.1;Name=WP_015877224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424665.1;locus_tag=NIV78_RS16200;product=flagellar basal body P-ring protein FlgI;protein_id=WP_015877224.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3473204 3473878 . - . ID=gene-NIV78_RS16205;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=NIV78_RS16205 NZ_CP100136.1 Protein Homology CDS 3473204 3473878 . - 0 ID=cds-WP_015877225.1;Parent=gene-NIV78_RS16205;Dbxref=Genbank:WP_015877225.1;Name=WP_015877225.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495504.1;locus_tag=NIV78_RS16205;product=flagellar basal body L-ring protein FlgH;protein_id=WP_015877225.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3473900 3474688 . - . ID=gene-NIV78_RS16210;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=NIV78_RS16210 NZ_CP100136.1 Protein Homology CDS 3473900 3474688 . - 0 ID=cds-WP_015877226.1;Parent=gene-NIV78_RS16210;Dbxref=Genbank:WP_015877226.1;Name=WP_015877226.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895799.1;locus_tag=NIV78_RS16210;product=flagellar basal-body rod protein FlgG;protein_id=WP_015877226.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3474720 3475472 . - . ID=gene-NIV78_RS16215;Name=NIV78_RS16215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16215 NZ_CP100136.1 Protein Homology CDS 3474720 3475472 . - 0 ID=cds-WP_015877227.1;Parent=gene-NIV78_RS16215;Dbxref=Genbank:WP_015877227.1;Name=WP_015877227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010112969.1;locus_tag=NIV78_RS16215;product=flagellar basal body rod protein FlgF;protein_id=WP_015877227.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3475504 3476742 . - . ID=gene-NIV78_RS16220;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=NIV78_RS16220 NZ_CP100136.1 Protein Homology CDS 3475504 3476742 . - 0 ID=cds-WP_017424664.1;Parent=gene-NIV78_RS16220;Dbxref=Genbank:WP_017424664.1;Name=WP_017424664.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763175.1;locus_tag=NIV78_RS16220;product=flagellar hook protein FlgE;protein_id=WP_017424664.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3476774 3477550 . - . ID=gene-NIV78_RS16225;Name=NIV78_RS16225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16225 NZ_CP100136.1 Protein Homology CDS 3476774 3477550 . - 0 ID=cds-WP_015877229.1;Parent=gene-NIV78_RS16225;Dbxref=Genbank:WP_015877229.1;Name=WP_015877229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877229.1;locus_tag=NIV78_RS16225;product=flagellar hook assembly protein FlgD;protein_id=WP_015877229.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3477658 3478083 . - . ID=gene-NIV78_RS16230;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=NIV78_RS16230 NZ_CP100136.1 Protein Homology CDS 3477658 3478083 . - 0 ID=cds-WP_015877230.1;Parent=gene-NIV78_RS16230;Dbxref=Genbank:WP_015877230.1;Name=WP_015877230.1;Ontology_term=GO:0001539,GO:0005198,GO:0009425;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body|0009425||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402757.1;locus_tag=NIV78_RS16230;product=flagellar basal body rod protein FlgC;protein_id=WP_015877230.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3478127 3478615 . - . ID=gene-NIV78_RS16235;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=NIV78_RS16235 NZ_CP100136.1 Protein Homology CDS 3478127 3478615 . - 0 ID=cds-WP_043225890.1;Parent=gene-NIV78_RS16235;Dbxref=Genbank:WP_043225890.1;Name=WP_043225890.1;Ontology_term=GO:0001539,GO:0005198,GO:0009429;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C proximal rod|0009429||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329388.1;locus_tag=NIV78_RS16235;product=flagellar basal body rod protein FlgB;protein_id=WP_043225890.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3478831 3480372 . + . ID=gene-NIV78_RS16240;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=NIV78_RS16240 NZ_CP100136.1 Protein Homology CDS 3478831 3480372 . + 0 ID=cds-WP_153478131.1;Parent=gene-NIV78_RS16240;Dbxref=Genbank:WP_153478131.1;Name=WP_153478131.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877232.1;locus_tag=NIV78_RS16240;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_153478131.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3480501 3480836 . + . ID=gene-NIV78_RS16245;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=NIV78_RS16245 NZ_CP100136.1 Protein Homology CDS 3480501 3480836 . + 0 ID=cds-WP_015877233.1;Parent=gene-NIV78_RS16245;Dbxref=Genbank:WP_015877233.1;Name=WP_015877233.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699654.1;locus_tag=NIV78_RS16245;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_015877233.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3480903 3481343 . + . ID=gene-NIV78_RS16250;Name=NIV78_RS16250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16250 NZ_CP100136.1 Protein Homology CDS 3480903 3481343 . + 0 ID=cds-WP_015877234.1;Parent=gene-NIV78_RS16250;Dbxref=Genbank:WP_015877234.1;Name=WP_015877234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402753.1;locus_tag=NIV78_RS16250;product=flagellar protein FlgN;protein_id=WP_015877234.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3481517 3482764 . - . ID=gene-NIV78_RS16255;Name=NIV78_RS16255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16255 NZ_CP100136.1 Protein Homology CDS 3481517 3482764 . - 0 ID=cds-WP_017924035.1;Parent=gene-NIV78_RS16255;Dbxref=Genbank:WP_017924035.1;Name=WP_017924035.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,tRNA adenylyltransferase activity|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877235.1;locus_tag=NIV78_RS16255;product=multifunctional CCA addition/repair protein;protein_id=WP_017924035.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3482785 3483417 . - . ID=gene-NIV78_RS16260;Name=NIV78_RS16260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16260 NZ_CP100136.1 Protein Homology CDS 3482785 3483417 . - 0 ID=cds-WP_251107191.1;Parent=gene-NIV78_RS16260;Dbxref=Genbank:WP_251107191.1;Name=WP_251107191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751938.1;locus_tag=NIV78_RS16260;product=glutathione S-transferase N-terminal domain-containing protein;protein_id=WP_251107191.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3483562 3484521 . - . ID=gene-NIV78_RS16265;Name=NIV78_RS16265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16265 NZ_CP100136.1 Protein Homology CDS 3483562 3484521 . - 0 ID=cds-WP_015877237.1;Parent=gene-NIV78_RS16265;Dbxref=Genbank:WP_015877237.1;Name=WP_015877237.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197236.1;locus_tag=NIV78_RS16265;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_015877237.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3484633 3486585 . - . ID=gene-NIV78_RS16270;Name=NIV78_RS16270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16270 NZ_CP100136.1 Protein Homology CDS 3484633 3486585 . - 0 ID=cds-WP_015877238.1;Parent=gene-NIV78_RS16270;Dbxref=Genbank:WP_015877238.1;Name=WP_015877238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602139.1;locus_tag=NIV78_RS16270;product=lytic transglycosylase domain-containing protein;protein_id=WP_015877238.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3486619 3487221 . + . ID=gene-NIV78_RS16275;Name=NIV78_RS16275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16275 NZ_CP100136.1 Protein Homology CDS 3486619 3487221 . + 0 ID=cds-WP_015877239.1;Parent=gene-NIV78_RS16275;Dbxref=Genbank:WP_015877239.1;Name=WP_015877239.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877239.1;locus_tag=NIV78_RS16275;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_015877239.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3487250 3487765 . - . ID=gene-NIV78_RS16280;Name=NIV78_RS16280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16280 NZ_CP100136.1 Protein Homology CDS 3487250 3487765 . - 0 ID=cds-WP_017425277.1;Parent=gene-NIV78_RS16280;Dbxref=Genbank:WP_017425277.1;Name=WP_017425277.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425277.1;locus_tag=NIV78_RS16280;product=winged helix DNA-binding protein;protein_id=WP_017425277.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3487925 3488581 . + . ID=gene-NIV78_RS16285;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=NIV78_RS16285 NZ_CP100136.1 Protein Homology CDS 3487925 3488581 . + 0 ID=cds-WP_015877241.1;Parent=gene-NIV78_RS16285;Dbxref=Genbank:WP_015877241.1;Name=WP_015877241.1;gbkey=CDS;gene=pxpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886275.1;locus_tag=NIV78_RS16285;product=5-oxoprolinase subunit PxpB;protein_id=WP_015877241.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3488578 3489645 . + . ID=gene-NIV78_RS16290;Name=NIV78_RS16290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16290 NZ_CP100136.1 Protein Homology CDS 3488578 3489645 . + 0 ID=cds-WP_015877242.1;Parent=gene-NIV78_RS16290;Dbxref=Genbank:WP_015877242.1;Name=WP_015877242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011401702.1;locus_tag=NIV78_RS16290;product=biotin-dependent carboxyltransferase family protein;protein_id=WP_015877242.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3489683 3490435 . + . ID=gene-NIV78_RS16295;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=NIV78_RS16295 NZ_CP100136.1 Protein Homology CDS 3489683 3490435 . + 0 ID=cds-WP_015877243.1;Parent=gene-NIV78_RS16295;Dbxref=Genbank:WP_015877243.1;Name=WP_015877243.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699663.1;locus_tag=NIV78_RS16295;product=5-oxoprolinase subunit PxpA;protein_id=WP_015877243.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3491007 3492113 . - . ID=gene-NIV78_RS16300;Name=NIV78_RS16300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16300 NZ_CP100136.1 Protein Homology CDS 3491007 3492113 . - 0 ID=cds-WP_230674466.1;Parent=gene-NIV78_RS16300;Dbxref=Genbank:WP_230674466.1;Name=WP_230674466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012434665.1;locus_tag=NIV78_RS16300;product=TraB/GumN family protein;protein_id=WP_230674466.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3492148 3493164 . - . ID=gene-NIV78_RS16305;Name=NIV78_RS16305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16305 NZ_CP100136.1 Protein Homology CDS 3492148 3493164 . - 0 ID=cds-WP_251107192.1;Parent=gene-NIV78_RS16305;Dbxref=Genbank:WP_251107192.1;Name=WP_251107192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523051.1;locus_tag=NIV78_RS16305;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_251107192.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3493161 3494156 . - . ID=gene-NIV78_RS16310;Name=NIV78_RS16310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16310 NZ_CP100136.1 Protein Homology CDS 3493161 3494156 . - 0 ID=cds-WP_017424684.1;Parent=gene-NIV78_RS16310;Dbxref=Genbank:WP_017424684.1;Name=WP_017424684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424684.1;locus_tag=NIV78_RS16310;product=ABC transporter ATP-binding protein;protein_id=WP_017424684.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3494159 3495070 . - . ID=gene-NIV78_RS16315;Name=NIV78_RS16315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16315 NZ_CP100136.1 Protein Homology CDS 3494159 3495070 . - 0 ID=cds-WP_017424685.1;Parent=gene-NIV78_RS16315;Dbxref=Genbank:WP_017424685.1;Name=WP_017424685.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489141.1;locus_tag=NIV78_RS16315;product=ABC transporter permease subunit;protein_id=WP_017424685.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3495075 3496085 . - . ID=gene-NIV78_RS16320;Name=NIV78_RS16320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16320 NZ_CP100136.1 Protein Homology CDS 3495075 3496085 . - 0 ID=cds-WP_015877248.1;Parent=gene-NIV78_RS16320;Dbxref=Genbank:WP_015877248.1;Name=WP_015877248.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014192601.1;locus_tag=NIV78_RS16320;product=ABC transporter permease subunit;protein_id=WP_015877248.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3496200 3497816 . - . ID=gene-NIV78_RS16325;Name=NIV78_RS16325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16325 NZ_CP100136.1 Protein Homology CDS 3496200 3497816 . - 0 ID=cds-WP_017923537.1;Parent=gene-NIV78_RS16325;Dbxref=Genbank:WP_017923537.1;Name=WP_017923537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877249.1;locus_tag=NIV78_RS16325;product=ABC transporter substrate-binding protein;protein_id=WP_017923537.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3498209 3499507 . - . ID=gene-NIV78_RS16330;Name=NIV78_RS16330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16330 NZ_CP100136.1 Protein Homology CDS 3498209 3499507 . - 0 ID=cds-WP_017924476.1;Parent=gene-NIV78_RS16330;Dbxref=Genbank:WP_017924476.1;Name=WP_017924476.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895773.1;locus_tag=NIV78_RS16330;product=MFS transporter;protein_id=WP_017924476.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3499692 3500000 . - . ID=gene-NIV78_RS16335;Name=NIV78_RS16335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16335 NZ_CP100136.1 Protein Homology CDS 3499692 3500000 . - 0 ID=cds-WP_017425038.1;Parent=gene-NIV78_RS16335;Dbxref=Genbank:WP_017425038.1;Name=WP_017425038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010101002.1;locus_tag=NIV78_RS16335;product=high-potential iron-sulfur protein;protein_id=WP_017425038.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3500156 3501136 . - . ID=gene-NIV78_RS16340;Name=NIV78_RS16340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16340 NZ_CP100136.1 Protein Homology CDS 3500156 3501136 . - 0 ID=cds-WP_015877252.1;Parent=gene-NIV78_RS16340;Dbxref=Genbank:WP_015877252.1;Name=WP_015877252.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011857941.1;locus_tag=NIV78_RS16340;product=AAA family ATPase;protein_id=WP_015877252.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3501493 3502023 . + . ID=gene-NIV78_RS16345;Name=NIV78_RS16345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16345 NZ_CP100136.1 Protein Homology CDS 3501493 3502023 . + 0 ID=cds-WP_015877253.1;Parent=gene-NIV78_RS16345;Dbxref=Genbank:WP_015877253.1;Name=WP_015877253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877253.1;locus_tag=NIV78_RS16345;product=hypothetical protein;protein_id=WP_015877253.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3502035 3502841 . + . ID=gene-NIV78_RS16350;Name=NIV78_RS16350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16350 NZ_CP100136.1 Protein Homology CDS 3502035 3502841 . + 0 ID=cds-WP_015877254.1;Parent=gene-NIV78_RS16350;Dbxref=Genbank:WP_015877254.1;Name=WP_015877254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699674.1;locus_tag=NIV78_RS16350;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_015877254.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3503127 3503897 . + . ID=gene-NIV78_RS16355;Name=NIV78_RS16355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16355 NZ_CP100136.1 Protein Homology CDS 3503127 3503897 . + 0 ID=cds-WP_015877255.1;Parent=gene-NIV78_RS16355;Dbxref=Genbank:WP_015877255.1;Name=WP_015877255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477532.1;locus_tag=NIV78_RS16355;product=ferredoxin--NADP reductase;protein_id=WP_015877255.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3504322 3505161 . + . ID=gene-NIV78_RS16360;Name=NIV78_RS16360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16360 NZ_CP100136.1 Protein Homology CDS 3504322 3505161 . + 0 ID=cds-WP_015877256.1;Parent=gene-NIV78_RS16360;Dbxref=Genbank:WP_015877256.1;Name=WP_015877256.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423054.1;locus_tag=NIV78_RS16360;product=histidine kinase;protein_id=WP_015877256.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3505171 3505824 . + . ID=gene-NIV78_RS16365;Name=rqpR;gbkey=Gene;gene=rqpR;gene_biotype=protein_coding;locus_tag=NIV78_RS16365 NZ_CP100136.1 Protein Homology CDS 3505171 3505824 . + 0 ID=cds-WP_015877257.1;Parent=gene-NIV78_RS16365;Dbxref=Genbank:WP_015877257.1;Name=WP_015877257.1;Note=The RqpSR system (Regulating Quorum sensing and Pathogenicity Sensor kinase and Response regulator) co-occurs with and modulates the expression of cis-2-dodecenoic acid quorum-sensing systems.;gbkey=CDS;gene=rqpR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877257.1;locus_tag=NIV78_RS16365;product=response regulator transcription factor RqpR;protein_id=WP_015877257.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3506063 3507463 . + . ID=gene-NIV78_RS16370;Name=NIV78_RS16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16370 NZ_CP100136.1 Protein Homology CDS 3506063 3507463 . + 0 ID=cds-WP_015877258.1;Parent=gene-NIV78_RS16370;Dbxref=Genbank:WP_015877258.1;Name=WP_015877258.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893490.1;locus_tag=NIV78_RS16370;product=amino acid permease;protein_id=WP_015877258.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3507517 3508245 . - . ID=gene-NIV78_RS16375;Name=NIV78_RS16375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16375 NZ_CP100136.1 Protein Homology CDS 3507517 3508245 . - 0 ID=cds-WP_017423053.1;Parent=gene-NIV78_RS16375;Dbxref=Genbank:WP_017423053.1;Name=WP_017423053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423053.1;locus_tag=NIV78_RS16375;product=PepSY-associated TM helix domain-containing protein;protein_id=WP_017423053.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3508677 3510305 . + . ID=gene-NIV78_RS16380;Name=NIV78_RS16380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16380 NZ_CP100136.1 Protein Homology CDS 3508677 3510305 . + 0 ID=cds-WP_251107193.1;Parent=gene-NIV78_RS16380;Dbxref=Genbank:WP_251107193.1;Name=WP_251107193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877260.1;locus_tag=NIV78_RS16380;product=rhomboid family intramembrane serine protease;protein_id=WP_251107193.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3510317 3510706 . - . ID=gene-NIV78_RS16385;Name=NIV78_RS16385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16385 NZ_CP100136.1 Protein Homology CDS 3510317 3510706 . - 0 ID=cds-WP_100555986.1;Parent=gene-NIV78_RS16385;Dbxref=Genbank:WP_100555986.1;Name=WP_100555986.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699681.1;locus_tag=NIV78_RS16385;product=EscU/YscU/HrcU family type III secretion system export apparatus switch protein;protein_id=WP_100555986.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3510703 3512166 . - . ID=gene-NIV78_RS16390;Name=NIV78_RS16390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16390 NZ_CP100136.1 Protein Homology CDS 3510703 3512166 . - 0 ID=cds-WP_015877262.1;Parent=gene-NIV78_RS16390;Dbxref=Genbank:WP_015877262.1;Name=WP_015877262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699682.1;locus_tag=NIV78_RS16390;product=flagellar hook-length control protein FliK;protein_id=WP_015877262.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3512458 3512790 . - . ID=gene-NIV78_RS16395;Name=NIV78_RS16395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16395 NZ_CP100136.1 Protein Homology CDS 3512458 3512790 . - 0 ID=cds-WP_015877263.1;Parent=gene-NIV78_RS16395;Dbxref=Genbank:WP_015877263.1;Name=WP_015877263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423956.1;locus_tag=NIV78_RS16395;product=flagellar protein FliT;protein_id=WP_015877263.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3512787 3513224 . - . ID=gene-NIV78_RS16400;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=NIV78_RS16400 NZ_CP100136.1 Protein Homology CDS 3512787 3513224 . - 0 ID=cds-WP_015877264.1;Parent=gene-NIV78_RS16400;Dbxref=Genbank:WP_015877264.1;Name=WP_015877264.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliS;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893501.1;locus_tag=NIV78_RS16400;product=flagellar export chaperone FliS;protein_id=WP_015877264.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3513365 3513703 . - . ID=gene-NIV78_RS16405;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=NIV78_RS16405 NZ_CP100136.1 Protein Homology CDS 3513365 3513703 . - 0 ID=cds-WP_017923604.1;Parent=gene-NIV78_RS16405;Dbxref=Genbank:WP_017923604.1;Name=WP_017923604.1;Ontology_term=GO:0001539,GO:0005198;gbkey=CDS;gene=fliE;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185219.1;locus_tag=NIV78_RS16405;product=flagellar hook-basal body complex protein FliE;protein_id=WP_017923604.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3513994 3515793 . + . ID=gene-NIV78_RS16410;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=NIV78_RS16410 NZ_CP100136.1 Protein Homology CDS 3513994 3515793 . + 0 ID=cds-WP_015877266.1;Parent=gene-NIV78_RS16410;Dbxref=Genbank:WP_015877266.1;Name=WP_015877266.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197168.1;locus_tag=NIV78_RS16410;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_015877266.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3515783 3516778 . + . ID=gene-NIV78_RS16415;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=NIV78_RS16415 NZ_CP100136.1 Protein Homology CDS 3515783 3516778 . + 0 ID=cds-WP_015877267.1;Parent=gene-NIV78_RS16415;Dbxref=Genbank:WP_015877267.1;Name=WP_015877267.1;Ontology_term=GO:0001539,GO:0006935,GO:0005198,GO:0009433;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum basal body%2C C ring|0009433||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334572.1;locus_tag=NIV78_RS16415;product=flagellar motor switch protein FliG;protein_id=WP_015877267.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3516771 3517454 . + . ID=gene-NIV78_RS16420;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=NIV78_RS16420 NZ_CP100136.1 Protein Homology CDS 3516771 3517454 . + 0 ID=cds-WP_015877268.1;Parent=gene-NIV78_RS16420;Dbxref=Genbank:WP_015877268.1;Name=WP_015877268.1;Ontology_term=GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525877.1;locus_tag=NIV78_RS16420;product=flagellar assembly protein FliH;protein_id=WP_015877268.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3517462 3518904 . + . ID=gene-NIV78_RS16425;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=NIV78_RS16425 NZ_CP100136.1 Protein Homology CDS 3517462 3518904 . + 0 ID=cds-WP_015877269.1;Parent=gene-NIV78_RS16425;Dbxref=Genbank:WP_015877269.1;Name=WP_015877269.1;Ontology_term=GO:0001539,GO:0016887,GO:0009288;gbkey=CDS;gene=fliI;go_component=bacterial-type flagellum|0009288||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007179930.1;locus_tag=NIV78_RS16425;product=flagellar protein export ATPase FliI;protein_id=WP_015877269.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3518907 3519371 . + . ID=gene-NIV78_RS16430;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=NIV78_RS16430 NZ_CP100136.1 Protein Homology CDS 3518907 3519371 . + 0 ID=cds-WP_035980586.1;Parent=gene-NIV78_RS16430;Dbxref=Genbank:WP_035980586.1;Name=WP_035980586.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877270.1;locus_tag=NIV78_RS16430;product=flagellar export protein FliJ;protein_id=WP_035980586.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3519391 3520791 . + . ID=gene-NIV78_RS16435;Name=NIV78_RS16435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16435 NZ_CP100136.1 Protein Homology CDS 3519391 3520791 . + 0 ID=cds-WP_251107194.1;Parent=gene-NIV78_RS16435;Dbxref=Genbank:WP_251107194.1;Name=WP_251107194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699691.1;locus_tag=NIV78_RS16435;product=flagellar hook-length control protein FliK;protein_id=WP_251107194.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3520973 3522649 . - . ID=gene-NIV78_RS16440;Name=NIV78_RS16440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16440 NZ_CP100136.1 Protein Homology CDS 3520973 3522649 . - 0 ID=cds-WP_124836219.1;Parent=gene-NIV78_RS16440;Dbxref=Genbank:WP_124836219.1;Name=WP_124836219.1;Ontology_term=GO:0016614,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877272.1;locus_tag=NIV78_RS16440;product=GMC family oxidoreductase N-terminal domain-containing protein;protein_id=WP_124836219.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3522879 3524555 . + . ID=gene-NIV78_RS16445;Name=NIV78_RS16445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16445 NZ_CP100136.1 Protein Homology CDS 3522879 3524555 . + 0 ID=cds-WP_015877273.1;Parent=gene-NIV78_RS16445;Dbxref=Genbank:WP_015877273.1;Name=WP_015877273.1;Ontology_term=GO:0003995;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011490180.1;locus_tag=NIV78_RS16445;product=isovaleryl-CoA dehydrogenase;protein_id=WP_015877273.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3524610 3526028 . + . ID=gene-NIV78_RS16450;Name=NIV78_RS16450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16450 NZ_CP100136.1 Protein Homology CDS 3524610 3526028 . + 0 ID=cds-WP_017923763.1;Parent=gene-NIV78_RS16450;Dbxref=Genbank:WP_017923763.1;Name=WP_017923763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010100937.1;locus_tag=NIV78_RS16450;product=coniferyl aldehyde dehydrogenase;protein_id=WP_017923763.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3526072 3527103 . - . ID=gene-NIV78_RS16455;Name=NIV78_RS16455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16455 NZ_CP100136.1 Protein Homology CDS 3526072 3527103 . - 0 ID=cds-WP_017923764.1;Parent=gene-NIV78_RS16455;Dbxref=Genbank:WP_017923764.1;Name=WP_017923764.1;Ontology_term=GO:0006468,GO:0004674;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255177.1;locus_tag=NIV78_RS16455;product=serine/threonine protein kinase;protein_id=WP_017923764.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3527152 3527364 . - . ID=gene-NIV78_RS16460;Name=NIV78_RS16460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16460 NZ_CP100136.1 Protein Homology CDS 3527152 3527364 . - 0 ID=cds-WP_006402972.1;Parent=gene-NIV78_RS16460;Dbxref=Genbank:WP_006402972.1;Name=WP_006402972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198969.1;locus_tag=NIV78_RS16460;product=hypothetical protein;protein_id=WP_006402972.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3527740 3529011 . + . ID=gene-NIV78_RS16465;Name=NIV78_RS16465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16465 NZ_CP100136.1 Protein Homology CDS 3527740 3529011 . + 0 ID=cds-WP_015877277.1;Parent=gene-NIV78_RS16465;Dbxref=Genbank:WP_015877277.1;Name=WP_015877277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255178.1;locus_tag=NIV78_RS16465;product=MFS transporter;protein_id=WP_015877277.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 3529127 3529318 . + . ID=gene-NIV78_RS16470;Name=NIV78_RS16470;end_range=3529318,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS16470;partial=true;pseudo=true NZ_CP100136.1 Protein Homology CDS 3529127 3529318 . + 0 ID=cds-NIV78_RS16470;Parent=gene-NIV78_RS16470;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3529318,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004548167.1;locus_tag=NIV78_RS16470;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 3529607 3529792 . + . ID=gene-NIV78_RS16475;Name=NIV78_RS16475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16475 NZ_CP100136.1 Protein Homology CDS 3529607 3529792 . + 0 ID=cds-WP_015877278.1;Parent=gene-NIV78_RS16475;Dbxref=Genbank:WP_015877278.1;Name=WP_015877278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877278.1;locus_tag=NIV78_RS16475;product=hypothetical protein;protein_id=WP_015877278.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3530219 3530425 . + . ID=gene-NIV78_RS16480;Name=NIV78_RS16480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16480 NZ_CP100136.1 Protein Homology CDS 3530219 3530425 . + 0 ID=cds-WP_015877279.1;Parent=gene-NIV78_RS16480;Dbxref=Genbank:WP_015877279.1;Name=WP_015877279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024143.1;locus_tag=NIV78_RS16480;product=DUF3185 family protein;protein_id=WP_015877279.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3530463 3531233 . - . ID=gene-NIV78_RS16485;Name=NIV78_RS16485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16485 NZ_CP100136.1 Protein Homology CDS 3530463 3531233 . - 0 ID=cds-WP_015877280.1;Parent=gene-NIV78_RS16485;Dbxref=Genbank:WP_015877280.1;Name=WP_015877280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877280.1;locus_tag=NIV78_RS16485;product=phytanoyl-CoA dioxygenase family protein;protein_id=WP_015877280.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3531651 3531992 . + . ID=gene-NIV78_RS16490;Name=NIV78_RS16490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16490 NZ_CP100136.1 Protein Homology CDS 3531651 3531992 . + 0 ID=cds-WP_015877281.1;Parent=gene-NIV78_RS16490;Dbxref=Genbank:WP_015877281.1;Name=WP_015877281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004536013.1;locus_tag=NIV78_RS16490;product=hypothetical protein;protein_id=WP_015877281.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3532152 3533342 . - . ID=gene-NIV78_RS16495;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=NIV78_RS16495 NZ_CP100136.1 Protein Homology CDS 3532152 3533342 . - 0 ID=cds-WP_015877282.1;Parent=gene-NIV78_RS16495;Dbxref=Genbank:WP_015877282.1;Name=WP_015877282.1;Ontology_term=GO:0006556,GO:0004478;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024140.1;locus_tag=NIV78_RS16495;product=methionine adenosyltransferase;protein_id=WP_015877282.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3533611 3534495 . + . ID=gene-NIV78_RS16500;Name=NIV78_RS16500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16500 NZ_CP100136.1 Protein Homology CDS 3533611 3534495 . + 0 ID=cds-WP_015877283.1;Parent=gene-NIV78_RS16500;Dbxref=Genbank:WP_015877283.1;Name=WP_015877283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482982.1;locus_tag=NIV78_RS16500;product=lipid A biosynthesis lauroyl acyltransferase;protein_id=WP_015877283.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3534578 3535444 . + . ID=gene-NIV78_RS16505;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=NIV78_RS16505 NZ_CP100136.1 Protein Homology CDS 3534578 3535444 . + 0 ID=cds-WP_017923808.1;Parent=gene-NIV78_RS16505;Dbxref=Genbank:WP_017923808.1;Name=WP_017923808.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009902167.1;locus_tag=NIV78_RS16505;product=diaminopimelate epimerase;protein_id=WP_017923808.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3535484 3536212 . + . ID=gene-NIV78_RS16510;Name=NIV78_RS16510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16510 NZ_CP100136.1 Protein Homology CDS 3535484 3536212 . + 0 ID=cds-WP_017923809.1;Parent=gene-NIV78_RS16510;Dbxref=Genbank:WP_017923809.1;Name=WP_017923809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601168.1;locus_tag=NIV78_RS16510;product=DUF484 family protein;protein_id=WP_017923809.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3536229 3537149 . + . ID=gene-NIV78_RS16515;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=NIV78_RS16515 NZ_CP100136.1 Protein Homology CDS 3536229 3537149 . + 0 ID=cds-WP_169512212.1;Parent=gene-NIV78_RS16515;Dbxref=Genbank:WP_169512212.1;Name=WP_169512212.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerC;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895732.1;locus_tag=NIV78_RS16515;product=tyrosine recombinase XerC;protein_id=WP_169512212.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3537237 3538490 . + . ID=gene-NIV78_RS16520;Name=NIV78_RS16520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16520 NZ_CP100136.1 Protein Homology CDS 3537237 3538490 . + 0 ID=cds-WP_169512213.1;Parent=gene-NIV78_RS16520;Dbxref=Genbank:WP_169512213.1;Name=WP_169512213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011204773.1;locus_tag=NIV78_RS16520;product=class I SAM-dependent rRNA methyltransferase;protein_id=WP_169512213.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3538682 3539758 . + . ID=gene-NIV78_RS16525;Name=NIV78_RS16525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16525 NZ_CP100136.1 Protein Homology CDS 3538682 3539758 . + 0 ID=cds-WP_043227654.1;Parent=gene-NIV78_RS16525;Dbxref=Genbank:WP_043227654.1;Name=WP_043227654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414099.1;locus_tag=NIV78_RS16525;product=GTP-binding protein;protein_id=WP_043227654.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3540297 3540713 . + . ID=gene-NIV78_RS16530;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=NIV78_RS16530 NZ_CP100136.1 Protein Homology CDS 3540297 3540713 . + 0 ID=cds-WP_015877289.1;Parent=gene-NIV78_RS16530;Dbxref=Genbank:WP_015877289.1;Name=WP_015877289.1;Ontology_term=GO:0006355,GO:0019899;gbkey=CDS;gene=dksA;go_function=enzyme binding|0019899||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010100883.1;locus_tag=NIV78_RS16530;product=RNA polymerase-binding protein DksA;protein_id=WP_015877289.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3541066 3541602 . + . ID=gene-NIV78_RS16535;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=NIV78_RS16535 NZ_CP100136.1 Protein Homology CDS 3541066 3541602 . + 0 ID=cds-WP_015877290.1;Parent=gene-NIV78_RS16535;Dbxref=Genbank:WP_015877290.1;Name=WP_015877290.1;Ontology_term=GO:0051603,GO:0004298;gbkey=CDS;gene=hslV;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760749.1;locus_tag=NIV78_RS16535;product=ATP-dependent protease subunit HslV;protein_id=WP_015877290.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3541613 3542956 . + . ID=gene-NIV78_RS16540;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=NIV78_RS16540 NZ_CP100136.1 Protein Homology CDS 3541613 3542956 . + 0 ID=cds-WP_017923670.1;Parent=gene-NIV78_RS16540;Dbxref=Genbank:WP_017923670.1;Name=WP_017923670.1;Ontology_term=GO:0005524,GO:0008233,GO:0016887;gbkey=CDS;gene=hslU;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895729.1;locus_tag=NIV78_RS16540;product=ATP-dependent protease ATPase subunit HslU;protein_id=WP_017923670.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3543096 3543638 . - . ID=gene-NIV78_RS16545;Name=NIV78_RS16545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16545 NZ_CP100136.1 Protein Homology CDS 3543096 3543638 . - 0 ID=cds-WP_015877292.1;Parent=gene-NIV78_RS16545;Dbxref=Genbank:WP_015877292.1;Name=WP_015877292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334600.1;locus_tag=NIV78_RS16545;product=response regulator transcription factor;protein_id=WP_015877292.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3543665 3544948 . - . ID=gene-NIV78_RS16550;Name=NIV78_RS16550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16550 NZ_CP100136.1 Protein Homology CDS 3543665 3544948 . - 0 ID=cds-WP_015877293.1;Parent=gene-NIV78_RS16550;Dbxref=Genbank:WP_015877293.1;Name=WP_015877293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877293.1;locus_tag=NIV78_RS16550;product=ATP-binding protein;protein_id=WP_015877293.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3545459 3546358 . + . ID=gene-NIV78_RS16555;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=NIV78_RS16555 NZ_CP100136.1 Protein Homology CDS 3545459 3546358 . + 0 ID=cds-WP_015877294.1;Parent=gene-NIV78_RS16555;Dbxref=Genbank:WP_015877294.1;Name=WP_015877294.1;Ontology_term=GO:0006592,GO:0003991;gbkey=CDS;gene=argB;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490510.1;locus_tag=NIV78_RS16555;product=acetylglutamate kinase;protein_id=WP_015877294.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3546355 3547149 . + . ID=gene-NIV78_RS16560;Name=NIV78_RS16560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16560 NZ_CP100136.1 Protein Homology CDS 3546355 3547149 . + 0 ID=cds-WP_169512215.1;Parent=gene-NIV78_RS16560;Dbxref=Genbank:WP_169512215.1;Name=WP_169512215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877295.1;locus_tag=NIV78_RS16560;product=pyrimidine 5'-nucleotidase;protein_id=WP_169512215.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3547116 3547817 . + . ID=gene-NIV78_RS16565;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=NIV78_RS16565 NZ_CP100136.1 Protein Homology CDS 3547116 3547817 . + 0 ID=cds-WP_017433330.1;Parent=gene-NIV78_RS16565;Dbxref=Genbank:WP_017433330.1;Name=WP_017433330.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877296.1;locus_tag=NIV78_RS16565;product=nucleoid occlusion factor SlmA;protein_id=WP_017433330.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3548073 3549218 . + . ID=gene-NIV78_RS16570;Name=NIV78_RS16570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16570 NZ_CP100136.1 Protein Homology CDS 3548073 3549218 . + 0 ID=cds-WP_015877297.1;Parent=gene-NIV78_RS16570;Dbxref=Genbank:WP_015877297.1;Name=WP_015877297.1;Ontology_term=GO:0009058,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761998.1;locus_tag=NIV78_RS16570;product=homoserine O-acetyltransferase;protein_id=WP_015877297.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3549215 3549829 . + . ID=gene-NIV78_RS16575;Name=metW;gbkey=Gene;gene=metW;gene_biotype=protein_coding;locus_tag=NIV78_RS16575 NZ_CP100136.1 Protein Homology CDS 3549215 3549829 . + 0 ID=cds-WP_015877298.1;Parent=gene-NIV78_RS16575;Dbxref=Genbank:WP_015877298.1;Name=WP_015877298.1;Ontology_term=GO:0009086;gbkey=CDS;gene=metW;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024122.1;locus_tag=NIV78_RS16575;product=methionine biosynthesis protein MetW;protein_id=WP_015877298.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3549836 3551149 . + . ID=gene-NIV78_RS16580;Name=NIV78_RS16580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16580 NZ_CP100136.1 Protein Homology CDS 3549836 3551149 . + 0 ID=cds-WP_017923741.1;Parent=gene-NIV78_RS16580;Dbxref=Genbank:WP_017923741.1;Name=WP_017923741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255600.1;locus_tag=NIV78_RS16580;product=AmpG family muropeptide MFS transporter;protein_id=WP_017923741.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3551139 3552092 . + . ID=gene-NIV78_RS16585;Name=NIV78_RS16585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16585 NZ_CP100136.1 Protein Homology CDS 3551139 3552092 . + 0 ID=cds-WP_251107195.1;Parent=gene-NIV78_RS16585;Dbxref=Genbank:WP_251107195.1;Name=WP_251107195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877300.1;locus_tag=NIV78_RS16585;product=M48 family metalloprotease;protein_id=WP_251107195.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3552085 3553032 . - . ID=gene-NIV78_RS16590;Name=NIV78_RS16590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16590 NZ_CP100136.1 Protein Homology CDS 3552085 3553032 . - 0 ID=cds-WP_017923328.1;Parent=gene-NIV78_RS16590;Dbxref=Genbank:WP_017923328.1;Name=WP_017923328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877301.1;locus_tag=NIV78_RS16590;product=AraC family transcriptional regulator;protein_id=WP_017923328.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3553255 3554313 . + . ID=gene-NIV78_RS16595;Name=NIV78_RS16595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16595 NZ_CP100136.1 Protein Homology CDS 3553255 3554313 . + 0 ID=cds-WP_015877302.1;Parent=gene-NIV78_RS16595;Dbxref=Genbank:WP_015877302.1;Name=WP_015877302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877302.1;locus_tag=NIV78_RS16595;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_015877302.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3554415 3555185 . - . ID=gene-NIV78_RS16600;Name=NIV78_RS16600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16600 NZ_CP100136.1 Protein Homology CDS 3554415 3555185 . - 0 ID=cds-WP_015877303.1;Parent=gene-NIV78_RS16600;Dbxref=Genbank:WP_015877303.1;Name=WP_015877303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009928327.1;locus_tag=NIV78_RS16600;product=exodeoxyribonuclease III;protein_id=WP_015877303.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3555241 3556080 . - . ID=gene-NIV78_RS16605;Name=NIV78_RS16605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16605 NZ_CP100136.1 Protein Homology CDS 3555241 3556080 . - 0 ID=cds-WP_015877304.1;Parent=gene-NIV78_RS16605;Dbxref=Genbank:WP_015877304.1;Name=WP_015877304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877304.1;locus_tag=NIV78_RS16605;product=polyphosphate kinase;protein_id=WP_015877304.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3556208 3557680 . - . ID=gene-NIV78_RS16610;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=NIV78_RS16610 NZ_CP100136.1 Protein Homology CDS 3556208 3557680 . - 0 ID=cds-WP_017424121.1;Parent=gene-NIV78_RS16610;Dbxref=Genbank:WP_017424121.1;Name=WP_017424121.1;Ontology_term=GO:0016884;gbkey=CDS;gene=gatB;go_function=carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190092.1;locus_tag=NIV78_RS16610;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=WP_017424121.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3557684 3559174 . - . ID=gene-NIV78_RS16615;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=NIV78_RS16615 NZ_CP100136.1 Protein Homology CDS 3557684 3559174 . - 0 ID=cds-WP_251107196.1;Parent=gene-NIV78_RS16615;Dbxref=Genbank:WP_251107196.1;Name=WP_251107196.1;Ontology_term=GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatA;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494379.1;locus_tag=NIV78_RS16615;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=WP_251107196.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3559267 3559566 . - . ID=gene-NIV78_RS16620;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=NIV78_RS16620 NZ_CP100136.1 Protein Homology CDS 3559267 3559566 . - 0 ID=cds-WP_017432877.1;Parent=gene-NIV78_RS16620;Dbxref=Genbank:WP_017432877.1;Name=WP_017432877.1;Ontology_term=GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatC;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012399478.1;locus_tag=NIV78_RS16620;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=WP_017432877.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3559963 3561006 . + . ID=gene-NIV78_RS16625;Name=NIV78_RS16625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16625 NZ_CP100136.1 Protein Homology CDS 3559963 3561006 . + 0 ID=cds-WP_004189550.1;Parent=gene-NIV78_RS16625;Dbxref=Genbank:WP_004189550.1;Name=WP_004189550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004628293.1;locus_tag=NIV78_RS16625;product=rod shape-determining protein;protein_id=WP_004189550.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3561184 3562326 . + . ID=gene-NIV78_RS16630;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=NIV78_RS16630 NZ_CP100136.1 Protein Homology CDS 3561184 3562326 . + 0 ID=cds-WP_161521174.1;Parent=gene-NIV78_RS16630;Dbxref=Genbank:WP_161521174.1;Name=WP_161521174.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877308.1;locus_tag=NIV78_RS16630;product=rod shape-determining protein MreC;protein_id=WP_161521174.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3562323 3562835 . + . ID=gene-NIV78_RS16635;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=NIV78_RS16635 NZ_CP100136.1 Protein Homology CDS 3562323 3562835 . + 0 ID=cds-WP_015877309.1;Parent=gene-NIV78_RS16635;Dbxref=Genbank:WP_015877309.1;Name=WP_015877309.1;Ontology_term=GO:0008360,GO:0003674;gbkey=CDS;gene=mreD;go_function=molecular_function|0003674||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189260.1;locus_tag=NIV78_RS16635;product=rod shape-determining protein MreD;protein_id=WP_015877309.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 3562935 3565236 . + . ID=gene-NIV78_RS16640;Name=mrdA;end_range=3565236,.;gbkey=Gene;gene=mrdA;gene_biotype=pseudogene;locus_tag=NIV78_RS16640;partial=true;pseudo=true NZ_CP100136.1 Protein Homology CDS 3562935 3565236 . + 0 ID=cds-NIV78_RS16640;Parent=gene-NIV78_RS16640;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009252,GO:0003824;end_range=3565236,.;gbkey=CDS;gene=mrdA;go_function=catalytic activity|0003824||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004554071.1;locus_tag=NIV78_RS16640;partial=true;product=penicillin-binding protein 2;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 3565211 3566359 . + . ID=gene-NIV78_RS16645;Name=rodA;gbkey=Gene;gene=rodA;gene_biotype=protein_coding;locus_tag=NIV78_RS16645 NZ_CP100136.1 Protein Homology CDS 3565211 3566359 . + 0 ID=cds-WP_015877311.1;Parent=gene-NIV78_RS16645;Dbxref=Genbank:WP_015877311.1;Name=WP_015877311.1;Ontology_term=GO:0008360;gbkey=CDS;gene=rodA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525857.1;locus_tag=NIV78_RS16645;product=rod shape-determining protein RodA;protein_id=WP_015877311.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3566437 3567267 . - . ID=gene-NIV78_RS16650;Name=NIV78_RS16650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16650 NZ_CP100136.1 Protein Homology CDS 3566437 3567267 . - 0 ID=cds-WP_035979041.1;Parent=gene-NIV78_RS16650;Dbxref=Genbank:WP_035979041.1;Name=WP_035979041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877312.1;locus_tag=NIV78_RS16650;product=sel1 repeat family protein;protein_id=WP_035979041.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3567719 3568171 . - . ID=gene-NIV78_RS16655;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=NIV78_RS16655 NZ_CP100136.1 Protein Homology CDS 3567719 3568171 . - 0 ID=cds-WP_015877313.1;Parent=gene-NIV78_RS16655;Dbxref=Genbank:WP_015877313.1;Name=WP_015877313.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482561.1;locus_tag=NIV78_RS16655;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_015877313.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3568191 3568823 . - . ID=gene-NIV78_RS16660;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=NIV78_RS16660 NZ_CP100136.1 Protein Homology CDS 3568191 3568823 . - 0 ID=cds-WP_017423492.1;Parent=gene-NIV78_RS16660;Dbxref=Genbank:WP_017423492.1;Name=WP_017423492.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007733358.1;locus_tag=NIV78_RS16660;product=7-carboxy-7-deazaguanine synthase;protein_id=WP_017423492.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3568967 3569701 . - . ID=gene-NIV78_RS16665;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=NIV78_RS16665 NZ_CP100136.1 Protein Homology CDS 3568967 3569701 . - 0 ID=cds-WP_015877315.1;Parent=gene-NIV78_RS16665;Dbxref=Genbank:WP_015877315.1;Name=WP_015877315.1;Ontology_term=GO:0008616;gbkey=CDS;gene=queC;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407218.1;locus_tag=NIV78_RS16665;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_015877315.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3570018 3570093 . - . ID=gene-NIV78_RS16670;Name=NIV78_RS16670;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS16670 NZ_CP100136.1 tRNAscan-SE tRNA 3570018 3570093 . - . ID=rna-NIV78_RS16670;Parent=gene-NIV78_RS16670;anticodon=(pos:complement(3570058..3570060));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS16670;product=tRNA-Phe NZ_CP100136.1 tRNAscan-SE exon 3570018 3570093 . - . ID=exon-NIV78_RS16670-1;Parent=rna-NIV78_RS16670;anticodon=(pos:complement(3570058..3570060));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS16670;product=tRNA-Phe NZ_CP100136.1 RefSeq gene 3570155 3570844 . - . ID=gene-NIV78_RS16675;Name=esaR;gbkey=Gene;gene=esaR;gene_biotype=protein_coding;locus_tag=NIV78_RS16675 NZ_CP100136.1 Protein Homology CDS 3570155 3570844 . - 0 ID=cds-WP_100556296.1;Parent=gene-NIV78_RS16675;Dbxref=Genbank:WP_100556296.1;Name=WP_100556296.1;gbkey=CDS;gene=esaR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495385.1;locus_tag=NIV78_RS16675;product=response regulator transcription factor EsaR;protein_id=WP_100556296.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3570845 3573256 . - . ID=gene-NIV78_RS16680;Name=esaS;gbkey=Gene;gene=esaS;gene_biotype=protein_coding;locus_tag=NIV78_RS16680 NZ_CP100136.1 Protein Homology CDS 3570845 3573256 . - 0 ID=cds-WP_015877317.1;Parent=gene-NIV78_RS16680;Dbxref=Genbank:WP_015877317.1;Name=WP_015877317.1;Note=Enhanced Sensitivity to Antibiotics Sensor;gbkey=CDS;gene=esaS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353567.1;locus_tag=NIV78_RS16680;product=sensor histidine kinase EsaS;protein_id=WP_015877317.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3573246 3573836 . - . ID=gene-NIV78_RS16685;Name=NIV78_RS16685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16685 NZ_CP100136.1 Protein Homology CDS 3573246 3573836 . - 0 ID=cds-WP_015877318.1;Parent=gene-NIV78_RS16685;Dbxref=Genbank:WP_015877318.1;Name=WP_015877318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004553747.1;locus_tag=NIV78_RS16685;product=DUF4390 domain-containing protein;protein_id=WP_015877318.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3573833 3575284 . - . ID=gene-NIV78_RS16690;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=NIV78_RS16690 NZ_CP100136.1 Protein Homology CDS 3573833 3575284 . - 0 ID=cds-WP_015877319.1;Parent=gene-NIV78_RS16690;Dbxref=Genbank:WP_015877319.1;Name=WP_015877319.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010100734.1;locus_tag=NIV78_RS16690;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_015877319.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3575541 3576398 . - . ID=gene-NIV78_RS16695;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=NIV78_RS16695 NZ_CP100136.1 Protein Homology CDS 3575541 3576398 . - 0 ID=cds-WP_015877320.1;Parent=gene-NIV78_RS16695;Dbxref=Genbank:WP_015877320.1;Name=WP_015877320.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007581962.1;locus_tag=NIV78_RS16695;product=zinc metalloprotease HtpX;protein_id=WP_015877320.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3576532 3577176 . - . ID=gene-NIV78_RS16700;Name=NIV78_RS16700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16700 NZ_CP100136.1 Protein Homology CDS 3576532 3577176 . - 0 ID=cds-WP_257757045.1;Parent=gene-NIV78_RS16700;Dbxref=Genbank:WP_257757045.1;Name=WP_257757045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423007.1;locus_tag=NIV78_RS16700;product=LysE family translocator;protein_id=WP_257757045.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3577402 3578385 . - . ID=gene-NIV78_RS16705;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=NIV78_RS16705 NZ_CP100136.1 Protein Homology CDS 3577402 3578385 . - 0 ID=cds-WP_124836207.1;Parent=gene-NIV78_RS16705;Dbxref=Genbank:WP_124836207.1;Name=WP_124836207.1;Ontology_term=GO:0006431,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410714.1;locus_tag=NIV78_RS16705;product=methionyl-tRNA formyltransferase;protein_id=WP_124836207.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3578409 3578912 . - . ID=gene-NIV78_RS16710;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=NIV78_RS16710 NZ_CP100136.1 Protein Homology CDS 3578409 3578912 . - 0 ID=cds-WP_015877323.1;Parent=gene-NIV78_RS16710;Dbxref=Genbank:WP_015877323.1;Name=WP_015877323.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010100727.1;locus_tag=NIV78_RS16710;product=peptide deformylase;protein_id=WP_015877323.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3579143 3580474 . + . ID=gene-NIV78_RS16715;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=NIV78_RS16715 NZ_CP100136.1 Protein Homology CDS 3579143 3580474 . + 0 ID=cds-WP_251107197.1;Parent=gene-NIV78_RS16715;Dbxref=Genbank:WP_251107197.1;Name=WP_251107197.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877324.1;locus_tag=NIV78_RS16715;product=DNA-processing protein DprA;protein_id=WP_251107197.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3580462 3580842 . + . ID=gene-NIV78_RS16720;Name=NIV78_RS16720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16720 NZ_CP100136.1 Protein Homology CDS 3580462 3580842 . + 0 ID=cds-WP_015877325.1;Parent=gene-NIV78_RS16720;Dbxref=Genbank:WP_015877325.1;Name=WP_015877325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877325.1;locus_tag=NIV78_RS16720;product=thioredoxin family protein;protein_id=WP_015877325.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3581073 3583727 . + . ID=gene-NIV78_RS16725;Name=NIV78_RS16725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16725 NZ_CP100136.1 Protein Homology CDS 3581073 3583727 . + 0 ID=cds-WP_015877326.1;Parent=gene-NIV78_RS16725;Dbxref=Genbank:WP_015877326.1;Name=WP_015877326.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877326.1;locus_tag=NIV78_RS16725;product=DNA topoisomerase III;protein_id=WP_015877326.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3583888 3584946 . - . ID=gene-NIV78_RS16730;Name=NIV78_RS16730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16730 NZ_CP100136.1 Protein Homology CDS 3583888 3584946 . - 0 ID=cds-WP_015877327.1;Parent=gene-NIV78_RS16730;Dbxref=Genbank:WP_015877327.1;Name=WP_015877327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893648.1;locus_tag=NIV78_RS16730;product=LysR family transcriptional regulator;protein_id=WP_015877327.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3585329 3586345 . + . ID=gene-NIV78_RS16735;Name=NIV78_RS16735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16735 NZ_CP100136.1 Protein Homology CDS 3585329 3586345 . + 0 ID=cds-WP_015877328.1;Parent=gene-NIV78_RS16735;Dbxref=Genbank:WP_015877328.1;Name=WP_015877328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188904.1;locus_tag=NIV78_RS16735;product=D-2-hydroxyacid dehydrogenase family protein;protein_id=WP_015877328.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3586355 3587239 . - . ID=gene-NIV78_RS16740;Name=NIV78_RS16740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16740 NZ_CP100136.1 Protein Homology CDS 3586355 3587239 . - 0 ID=cds-WP_251107198.1;Parent=gene-NIV78_RS16740;Dbxref=Genbank:WP_251107198.1;Name=WP_251107198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877329.1;locus_tag=NIV78_RS16740;product=patatin-like phospholipase family protein;protein_id=WP_251107198.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3587250 3587654 . - . ID=gene-NIV78_RS16745;Name=NIV78_RS16745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16745 NZ_CP100136.1 Protein Homology CDS 3587250 3587654 . - 0 ID=cds-WP_015877330.1;Parent=gene-NIV78_RS16745;Dbxref=Genbank:WP_015877330.1;Name=WP_015877330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017772355.1;locus_tag=NIV78_RS16745;product=PaaI family thioesterase;protein_id=WP_015877330.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3587844 3587919 . + . ID=gene-NIV78_RS16750;Name=NIV78_RS16750;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS16750 NZ_CP100136.1 tRNAscan-SE tRNA 3587844 3587919 . + . ID=rna-NIV78_RS16750;Parent=gene-NIV78_RS16750;anticodon=(pos:3587877..3587879);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS16750;product=tRNA-Lys NZ_CP100136.1 tRNAscan-SE exon 3587844 3587919 . + . ID=exon-NIV78_RS16750-1;Parent=rna-NIV78_RS16750;anticodon=(pos:3587877..3587879);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS16750;product=tRNA-Lys NZ_CP100136.1 RefSeq gene 3588269 3588721 . + . ID=gene-NIV78_RS16755;Name=NIV78_RS16755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16755 NZ_CP100136.1 Protein Homology CDS 3588269 3588721 . + 0 ID=cds-WP_257757046.1;Parent=gene-NIV78_RS16755;Dbxref=Genbank:WP_257757046.1;Name=WP_257757046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011401676.1;locus_tag=NIV78_RS16755;product=PAAR domain-containing protein;protein_id=WP_257757046.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3588798 3588935 . - . ID=gene-NIV78_RS16760;Name=NIV78_RS16760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16760 NZ_CP100136.1 Protein Homology CDS 3588798 3588935 . - 0 ID=cds-WP_017924734.1;Parent=gene-NIV78_RS16760;Dbxref=Genbank:WP_017924734.1;Name=WP_017924734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400880.1;locus_tag=NIV78_RS16760;product=hypothetical protein;protein_id=WP_017924734.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3588984 3590534 . + . ID=gene-NIV78_RS16765;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=NIV78_RS16765 NZ_CP100136.1 Protein Homology CDS 3588984 3590534 . + 0 ID=cds-WP_153477359.1;Parent=gene-NIV78_RS16765;Dbxref=Genbank:WP_153477359.1;Name=WP_153477359.1;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213865.1;locus_tag=NIV78_RS16765;product=IS21 family transposase;protein_id=WP_153477359.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3590550 3591299 . + . ID=gene-NIV78_RS16770;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=NIV78_RS16770 NZ_CP100136.1 Protein Homology CDS 3590550 3591299 . + 0 ID=cds-WP_006400877.1;Parent=gene-NIV78_RS16770;Dbxref=Genbank:WP_006400877.1;Name=WP_006400877.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732736.1;locus_tag=NIV78_RS16770;product=IS21-like element ISBmu3 family helper ATPase IstB;protein_id=WP_006400877.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3591497 3592246 . + . ID=gene-NIV78_RS16775;Name=NIV78_RS16775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16775 NZ_CP100136.1 Protein Homology CDS 3591497 3592246 . + 0 ID=cds-WP_043225191.1;Parent=gene-NIV78_RS16775;Dbxref=Genbank:WP_043225191.1;Name=WP_043225191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011401675.1;locus_tag=NIV78_RS16775;product=VRR-NUC domain-containing protein;protein_id=WP_043225191.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3592257 3593474 . + . ID=gene-NIV78_RS16780;Name=NIV78_RS16780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16780 NZ_CP100136.1 Protein Homology CDS 3592257 3593474 . + 0 ID=cds-WP_017922740.1;Parent=gene-NIV78_RS16780;Dbxref=Genbank:WP_017922740.1;Name=WP_017922740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876338.1;locus_tag=NIV78_RS16780;product=DUF3396 domain-containing protein;protein_id=WP_017922740.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3593755 3596961 . - . ID=gene-NIV78_RS16785;Name=NIV78_RS16785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16785 NZ_CP100136.1 GeneMarkS-2+ CDS 3593755 3596961 . - 0 ID=cds-WP_017922741.1;Parent=gene-NIV78_RS16785;Dbxref=Genbank:WP_017922741.1;Name=WP_017922741.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS16785;product=hypothetical protein;protein_id=WP_017922741.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3596981 3599056 . - . ID=gene-NIV78_RS16790;Name=NIV78_RS16790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16790 NZ_CP100136.1 Protein Homology CDS 3596981 3599056 . - 0 ID=cds-WP_017922742.1;Parent=gene-NIV78_RS16790;Dbxref=Genbank:WP_017922742.1;Name=WP_017922742.1;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: protein motif:HMM:NF014442.2;locus_tag=NIV78_RS16790;product=N-6 DNA methylase;protein_id=WP_017922742.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3599053 3600846 . - . ID=gene-NIV78_RS16795;Name=NIV78_RS16795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16795 NZ_CP100136.1 Protein Homology CDS 3599053 3600846 . - 0 ID=cds-WP_017922743.1;Parent=gene-NIV78_RS16795;Dbxref=Genbank:WP_017922743.1;Name=WP_017922743.1;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: protein motif:HMM:NF013704.2;locus_tag=NIV78_RS16795;product=DNA methyltransferase;protein_id=WP_017922743.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3601448 3602290 . + . ID=gene-NIV78_RS16800;Name=NIV78_RS16800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16800 NZ_CP100136.1 GeneMarkS-2+ CDS 3601448 3602290 . + 0 ID=cds-WP_251107200.1;Parent=gene-NIV78_RS16800;Dbxref=Genbank:WP_251107200.1;Name=WP_251107200.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS16800;product=hypothetical protein;protein_id=WP_251107200.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3602396 3602596 . + . ID=gene-NIV78_RS16805;Name=NIV78_RS16805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16805 NZ_CP100136.1 GeneMarkS-2+ CDS 3602396 3602596 . + 0 ID=cds-WP_080630327.1;Parent=gene-NIV78_RS16805;Dbxref=Genbank:WP_080630327.1;Name=WP_080630327.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS16805;product=hypothetical protein;protein_id=WP_080630327.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3602564 3602776 . - . ID=gene-NIV78_RS16810;Name=NIV78_RS16810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16810 NZ_CP100136.1 Protein Homology CDS 3602564 3602776 . - 0 ID=cds-WP_251107201.1;Parent=gene-NIV78_RS16810;Dbxref=Genbank:WP_251107201.1;Name=WP_251107201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004546972.1;locus_tag=NIV78_RS16810;product=DNA-binding protein;protein_id=WP_251107201.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3602975 3603781 . - . ID=gene-NIV78_RS16815;Name=NIV78_RS16815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16815 NZ_CP100136.1 GeneMarkS-2+ CDS 3602975 3603781 . - 0 ID=cds-WP_157384155.1;Parent=gene-NIV78_RS16815;Dbxref=Genbank:WP_157384155.1;Name=WP_157384155.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS16815;product=hypothetical protein;protein_id=WP_157384155.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3603946 3605292 . - . ID=gene-NIV78_RS16820;Name=NIV78_RS16820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16820 NZ_CP100136.1 Protein Homology CDS 3603946 3605292 . - 0 ID=cds-WP_017923542.1;Parent=gene-NIV78_RS16820;Dbxref=Genbank:WP_017923542.1;Name=WP_017923542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004538712.1;locus_tag=NIV78_RS16820;product=integrase family protein;protein_id=WP_017923542.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3605938 3607551 . - . ID=gene-NIV78_RS16825;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=NIV78_RS16825 NZ_CP100136.1 Protein Homology CDS 3605938 3607551 . - 0 ID=cds-WP_015877331.1;Parent=gene-NIV78_RS16825;Dbxref=Genbank:WP_015877331.1;Name=WP_015877331.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009962323.1;locus_tag=NIV78_RS16825;product=glutamate--cysteine ligase;protein_id=WP_015877331.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3607701 3608684 . - . ID=gene-NIV78_RS16830;Name=NIV78_RS16830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16830 NZ_CP100136.1 Protein Homology CDS 3607701 3608684 . - 0 ID=cds-WP_017423274.1;Parent=gene-NIV78_RS16830;Dbxref=Genbank:WP_017423274.1;Name=WP_017423274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423274.1;locus_tag=NIV78_RS16830;product=3-methyladenine DNA glycosylase 2;protein_id=WP_017423274.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3608681 3609769 . - . ID=gene-NIV78_RS16835;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=NIV78_RS16835 NZ_CP100136.1 Protein Homology CDS 3608681 3609769 . - 0 ID=cds-WP_100556635.1;Parent=gene-NIV78_RS16835;Dbxref=Genbank:WP_100556635.1;Name=WP_100556635.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004553740.1;locus_tag=NIV78_RS16835;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WP_100556635.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3610278 3610694 . + . ID=gene-NIV78_RS16840;Name=NIV78_RS16840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16840 NZ_CP100136.1 Protein Homology CDS 3610278 3610694 . + 0 ID=cds-WP_015877334.1;Parent=gene-NIV78_RS16840;Dbxref=Genbank:WP_015877334.1;Name=WP_015877334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877334.1;locus_tag=NIV78_RS16840;product=VOC family protein;protein_id=WP_015877334.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3610789 3611343 . - . ID=gene-NIV78_RS16845;Name=NIV78_RS16845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16845 NZ_CP100136.1 Protein Homology CDS 3610789 3611343 . - 0 ID=cds-WP_015877335.1;Parent=gene-NIV78_RS16845;Dbxref=Genbank:WP_015877335.1;Name=WP_015877335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877335.1;locus_tag=NIV78_RS16845;product=YaeQ family protein;protein_id=WP_015877335.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3611541 3611891 . - . ID=gene-NIV78_RS16850;Name=NIV78_RS16850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16850 NZ_CP100136.1 Protein Homology CDS 3611541 3611891 . - 0 ID=cds-WP_015877336.1;Parent=gene-NIV78_RS16850;Dbxref=Genbank:WP_015877336.1;Name=WP_015877336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877336.1;locus_tag=NIV78_RS16850;product=hypothetical protein;protein_id=WP_015877336.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3612037 3612306 . - . ID=gene-NIV78_RS16855;Name=NIV78_RS16855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16855 NZ_CP100136.1 GeneMarkS-2+ CDS 3612037 3612306 . - 0 ID=cds-WP_153478146.1;Parent=gene-NIV78_RS16855;Dbxref=Genbank:WP_153478146.1;Name=WP_153478146.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS16855;product=hypothetical protein;protein_id=WP_153478146.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3612295 3612465 . + . ID=gene-NIV78_RS16860;Name=NIV78_RS16860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16860 NZ_CP100136.1 Protein Homology CDS 3612295 3612465 . + 0 ID=cds-WP_017423273.1;Parent=gene-NIV78_RS16860;Dbxref=Genbank:WP_017423273.1;Name=WP_017423273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010113186.1;locus_tag=NIV78_RS16860;product=hypothetical protein;protein_id=WP_017423273.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3612620 3613567 . - . ID=gene-NIV78_RS16865;Name=NIV78_RS16865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16865 NZ_CP100136.1 Protein Homology CDS 3612620 3613567 . - 0 ID=cds-WP_017423272.1;Parent=gene-NIV78_RS16865;Dbxref=Genbank:WP_017423272.1;Name=WP_017423272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007580800.1;locus_tag=NIV78_RS16865;product=cupin;protein_id=WP_017423272.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3613766 3614740 . + . ID=gene-NIV78_RS16870;Name=NIV78_RS16870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16870 NZ_CP100136.1 Protein Homology CDS 3613766 3614740 . + 0 ID=cds-WP_017423271.1;Parent=gene-NIV78_RS16870;Dbxref=Genbank:WP_017423271.1;Name=WP_017423271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423271.1;locus_tag=NIV78_RS16870;product=LysR family transcriptional regulator;protein_id=WP_017423271.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3614741 3615130 . - . ID=gene-NIV78_RS16875;Name=NIV78_RS16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16875 NZ_CP100136.1 GeneMarkS-2+ CDS 3614741 3615130 . - 0 ID=cds-WP_257757051.1;Parent=gene-NIV78_RS16875;Dbxref=Genbank:WP_257757051.1;Name=WP_257757051.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS16875;product=hypothetical protein;protein_id=WP_257757051.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3615484 3616301 . - . ID=gene-NIV78_RS16880;Name=NIV78_RS16880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16880 NZ_CP100136.1 Protein Homology CDS 3615953 3616301 . - 0 ID=cds-WP_085962362.1-4;Parent=gene-NIV78_RS16880;Dbxref=Genbank:WP_085962362.1;Name=WP_085962362.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS16880;product=IS5 family transposase;protein_id=WP_085962362.1;transl_table=11 NZ_CP100136.1 Protein Homology CDS 3615484 3615953 . - 2 ID=cds-WP_085962362.1-4;Parent=gene-NIV78_RS16880;Dbxref=Genbank:WP_085962362.1;Name=WP_085962362.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS16880;product=IS5 family transposase;protein_id=WP_085962362.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3616728 3616862 . + . ID=gene-NIV78_RS16885;Name=NIV78_RS16885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16885 NZ_CP100136.1 GeneMarkS-2+ CDS 3616728 3616862 . + 0 ID=cds-WP_017925047.1;Parent=gene-NIV78_RS16885;Dbxref=Genbank:WP_017925047.1;Name=WP_017925047.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS16885;product=hypothetical protein;protein_id=WP_017925047.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3616872 3617689 . - . ID=gene-NIV78_RS16890;Name=NIV78_RS16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16890 NZ_CP100136.1 Protein Homology CDS 3617341 3617689 . - 0 ID=cds-WP_085962419.1;Parent=gene-NIV78_RS16890;Dbxref=Genbank:WP_085962419.1;Name=WP_085962419.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS16890;product=IS5 family transposase;protein_id=WP_085962419.1;transl_table=11 NZ_CP100136.1 Protein Homology CDS 3616872 3617341 . - 2 ID=cds-WP_085962419.1;Parent=gene-NIV78_RS16890;Dbxref=Genbank:WP_085962419.1;Name=WP_085962419.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS16890;product=IS5 family transposase;protein_id=WP_085962419.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3617834 3618106 . + . ID=gene-NIV78_RS16895;Name=NIV78_RS16895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16895 NZ_CP100136.1 Protein Homology CDS 3617834 3618106 . + 0 ID=cds-WP_080630176.1;Parent=gene-NIV78_RS16895;Dbxref=Genbank:WP_080630176.1;Name=WP_080630176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012762679.1;locus_tag=NIV78_RS16895;product=hypothetical protein;protein_id=WP_080630176.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3618168 3618326 . + . ID=gene-NIV78_RS16900;Name=NIV78_RS16900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16900 NZ_CP100136.1 Protein Homology CDS 3618168 3618326 . + 0 ID=cds-WP_237657721.1;Parent=gene-NIV78_RS16900;Dbxref=Genbank:WP_237657721.1;Name=WP_237657721.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017717.2;locus_tag=NIV78_RS16900;product=AlpA family phage regulatory protein;protein_id=WP_237657721.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3618867 3619853 . - . ID=gene-NIV78_RS16905;Name=NIV78_RS16905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16905 NZ_CP100136.1 GeneMarkS-2+ CDS 3618867 3619853 . - 0 ID=cds-WP_230674563.1;Parent=gene-NIV78_RS16905;Dbxref=Genbank:WP_230674563.1;Name=WP_230674563.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS16905;product=hypothetical protein;protein_id=WP_230674563.1;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 3620047 3620283 . - . ID=gene-NIV78_RS16910;Name=NIV78_RS16910;end_range=3620283,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS16910;partial=true;pseudo=true;start_range=.,3620047 NZ_CP100136.1 Protein Homology CDS 3620047 3620283 . - 0 ID=cds-NIV78_RS16910;Parent=gene-NIV78_RS16910;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3620283,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004536604.1;locus_tag=NIV78_RS16910;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3620047;transl_table=11 NZ_CP100136.1 RefSeq pseudogene 3620354 3621433 . - . ID=gene-NIV78_RS16915;Name=NIV78_RS16915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS16915;pseudo=true NZ_CP100136.1 Protein Homology CDS 3620354 3621433 . - 0 ID=cds-NIV78_RS16915;Parent=gene-NIV78_RS16915;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612095.1;locus_tag=NIV78_RS16915;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP100136.1 RefSeq gene 3621877 3622239 . - . ID=gene-NIV78_RS16920;Name=NIV78_RS16920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16920 NZ_CP100136.1 GeneMarkS-2+ CDS 3621877 3622239 . - 0 ID=cds-WP_257757052.1;Parent=gene-NIV78_RS16920;Dbxref=Genbank:WP_257757052.1;Name=WP_257757052.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS16920;product=DUF4238 domain-containing protein;protein_id=WP_257757052.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3622270 3623826 . - . ID=gene-NIV78_RS16925;Name=NIV78_RS16925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16925 NZ_CP100136.1 Protein Homology CDS 3622270 3623826 . - 0 ID=cds-WP_012732752.1-3;Parent=gene-NIV78_RS16925;Dbxref=Genbank:WP_012732752.1;Name=WP_012732752.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875269.1;locus_tag=NIV78_RS16925;product=IS66 family transposase;protein_id=WP_012732752.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3623858 3624208 . - . ID=gene-NIV78_RS16930;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=NIV78_RS16930 NZ_CP100136.1 Protein Homology CDS 3623858 3624208 . - 0 ID=cds-WP_012732753.1-3;Parent=gene-NIV78_RS16930;Dbxref=Genbank:WP_012732753.1;Name=WP_012732753.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: protein motif:HMM:NF017528.2;locus_tag=NIV78_RS16930;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_012732753.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3624184 3624660 . - . ID=gene-NIV78_RS16935;Name=NIV78_RS16935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16935 NZ_CP100136.1 Protein Homology CDS 3624184 3624660 . - 0 ID=cds-WP_012734051.1-3;Parent=gene-NIV78_RS16935;Dbxref=Genbank:WP_012734051.1;Name=WP_012734051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699891.1;locus_tag=NIV78_RS16935;product=transposase;protein_id=WP_012734051.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3624708 3624851 . - . ID=gene-NIV78_RS16940;Name=NIV78_RS16940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16940 NZ_CP100136.1 GeneMarkS-2+ CDS 3624708 3624851 . - 0 ID=cds-WP_257757054.1;Parent=gene-NIV78_RS16940;Dbxref=Genbank:WP_257757054.1;Name=WP_257757054.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS16940;product=hypothetical protein;protein_id=WP_257757054.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3624925 3625437 . - . ID=gene-NIV78_RS16945;Name=NIV78_RS16945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16945 NZ_CP100136.1 Protein Homology CDS 3624925 3625437 . - 0 ID=cds-WP_257757056.1;Parent=gene-NIV78_RS16945;Dbxref=Genbank:WP_257757056.1;Name=WP_257757056.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025388.2;locus_tag=NIV78_RS16945;product=DUF4238 domain-containing protein;protein_id=WP_257757056.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3626252 3629104 . - . ID=gene-NIV78_RS16950;Name=NIV78_RS16950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16950 NZ_CP100136.1 Protein Homology CDS 3626252 3629104 . - 0 ID=cds-WP_257757058.1;Parent=gene-NIV78_RS16950;Dbxref=Genbank:WP_257757058.1;Name=WP_257757058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004547471.1;locus_tag=NIV78_RS16950;product=DUF927 domain-containing protein;protein_id=WP_257757058.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3629230 3629646 . - . ID=gene-NIV78_RS16955;Name=NIV78_RS16955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16955 NZ_CP100136.1 GeneMarkS-2+ CDS 3629230 3629646 . - 0 ID=cds-WP_245163772.1;Parent=gene-NIV78_RS16955;Dbxref=Genbank:WP_245163772.1;Name=WP_245163772.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS16955;product=hypothetical protein;protein_id=WP_245163772.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3629663 3630010 . - . ID=gene-NIV78_RS16960;Name=NIV78_RS16960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16960 NZ_CP100136.1 Protein Homology CDS 3629663 3630010 . - 0 ID=cds-WP_151197628.1;Parent=gene-NIV78_RS16960;Dbxref=Genbank:WP_151197628.1;Name=WP_151197628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522498.1;locus_tag=NIV78_RS16960;product=hypothetical protein;protein_id=WP_151197628.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3630003 3630215 . - . ID=gene-NIV78_RS16965;Name=NIV78_RS16965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16965 NZ_CP100136.1 Protein Homology CDS 3630003 3630215 . - 0 ID=cds-WP_173941144.1;Parent=gene-NIV78_RS16965;Dbxref=Genbank:WP_173941144.1;Name=WP_173941144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522499.1;locus_tag=NIV78_RS16965;product=hypothetical protein;protein_id=WP_173941144.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3630208 3630516 . - . ID=gene-NIV78_RS16970;Name=NIV78_RS16970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16970 NZ_CP100136.1 Protein Homology CDS 3630208 3630516 . - 0 ID=cds-WP_173941145.1;Parent=gene-NIV78_RS16970;Dbxref=Genbank:WP_173941145.1;Name=WP_173941145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009908644.1;locus_tag=NIV78_RS16970;product=hypothetical protein;protein_id=WP_173941145.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3630509 3630892 . - . ID=gene-NIV78_RS16975;Name=NIV78_RS16975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16975 NZ_CP100136.1 GeneMarkS-2+ CDS 3630509 3630892 . - 0 ID=cds-WP_162483386.1;Parent=gene-NIV78_RS16975;Dbxref=Genbank:WP_162483386.1;Name=WP_162483386.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS16975;product=hypothetical protein;protein_id=WP_162483386.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3631045 3631320 . - . ID=gene-NIV78_RS16980;Name=NIV78_RS16980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16980 NZ_CP100136.1 Protein Homology CDS 3631045 3631320 . - 0 ID=cds-WP_035978601.1;Parent=gene-NIV78_RS16980;Dbxref=Genbank:WP_035978601.1;Name=WP_035978601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004531951.1;locus_tag=NIV78_RS16980;product=hypothetical protein;protein_id=WP_035978601.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3631320 3631583 . - . ID=gene-NIV78_RS16985;Name=NIV78_RS16985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16985 NZ_CP100136.1 Protein Homology CDS 3631320 3631583 . - 0 ID=cds-WP_173941213.1;Parent=gene-NIV78_RS16985;Dbxref=Genbank:WP_173941213.1;Name=WP_173941213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526379.1;locus_tag=NIV78_RS16985;product=AlpA family phage regulatory protein;protein_id=WP_173941213.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3631702 3632559 . - . ID=gene-NIV78_RS16990;Name=NIV78_RS16990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16990 NZ_CP100136.1 Protein Homology CDS 3631702 3632559 . - 0 ID=cds-WP_245163773.1;Parent=gene-NIV78_RS16990;Dbxref=Genbank:WP_245163773.1;Name=WP_245163773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526378.1;locus_tag=NIV78_RS16990;product=hypothetical protein;protein_id=WP_245163773.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3632891 3635800 . - . ID=gene-NIV78_RS16995;Name=NIV78_RS16995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS16995 NZ_CP100136.1 Protein Homology CDS 3632891 3635800 . - 0 ID=cds-WP_173941146.1;Parent=gene-NIV78_RS16995;Dbxref=Genbank:WP_173941146.1;Name=WP_173941146.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014442.2;locus_tag=NIV78_RS16995;product=N-6 DNA methylase;protein_id=WP_173941146.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3636053 3636628 . + . ID=gene-NIV78_RS17000;Name=NIV78_RS17000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17000 NZ_CP100136.1 Protein Homology CDS 3636053 3636628 . + 0 ID=cds-WP_011402625.1;Parent=gene-NIV78_RS17000;Dbxref=Genbank:WP_011402625.1;Name=WP_011402625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758158.1;locus_tag=NIV78_RS17000;product=recombinase family protein;protein_id=WP_011402625.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3636939 3638168 . - . ID=gene-NIV78_RS17005;Name=NIV78_RS17005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17005 NZ_CP100136.1 Protein Homology CDS 3636939 3638168 . - 0 ID=cds-WP_257757059.1;Parent=gene-NIV78_RS17005;Dbxref=Genbank:WP_257757059.1;Name=WP_257757059.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255966.1;locus_tag=NIV78_RS17005;product=tyrosine-type recombinase/integrase;protein_id=WP_257757059.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3638412 3639830 . - . ID=gene-NIV78_RS17010;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=NIV78_RS17010 NZ_CP100136.1 Protein Homology CDS 3638412 3639830 . - 0 ID=cds-WP_015877344.1;Parent=gene-NIV78_RS17010;Dbxref=Genbank:WP_015877344.1;Name=WP_015877344.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041491300.1;locus_tag=NIV78_RS17010;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_015877344.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3640165 3640581 . + . ID=gene-NIV78_RS17015;Name=NIV78_RS17015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17015 NZ_CP100136.1 Protein Homology CDS 3640165 3640581 . + 0 ID=cds-WP_015877345.1;Parent=gene-NIV78_RS17015;Dbxref=Genbank:WP_015877345.1;Name=WP_015877345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877345.1;locus_tag=NIV78_RS17015;product=transcriptional regulator;protein_id=WP_015877345.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3640999 3641418 . + . ID=gene-NIV78_RS17020;Name=NIV78_RS17020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17020 NZ_CP100136.1 Protein Homology CDS 3640999 3641418 . + 0 ID=cds-WP_015877346.1;Parent=gene-NIV78_RS17020;Dbxref=Genbank:WP_015877346.1;Name=WP_015877346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877346.1;locus_tag=NIV78_RS17020;product=transcriptional regulator;protein_id=WP_015877346.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3641596 3643257 . - . ID=gene-NIV78_RS17025;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=NIV78_RS17025 NZ_CP100136.1 Protein Homology CDS 3641596 3643257 . - 0 ID=cds-WP_017425442.1;Parent=gene-NIV78_RS17025;Dbxref=Genbank:WP_017425442.1;Name=WP_017425442.1;Ontology_term=GO:0032977,GO:0016021;gbkey=CDS;gene=yidC;go_component=integral component of membrane|0016021||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011850880.1;locus_tag=NIV78_RS17025;product=membrane protein insertase YidC;protein_id=WP_017425442.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3643266 3643532 . - . ID=gene-NIV78_RS17030;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=NIV78_RS17030 NZ_CP100136.1 Protein Homology CDS 3643266 3643532 . - 0 ID=cds-WP_206741320.1;Parent=gene-NIV78_RS17030;Dbxref=Genbank:WP_206741320.1;Name=WP_206741320.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198815.1;locus_tag=NIV78_RS17030;product=membrane protein insertion efficiency factor YidD;protein_id=WP_206741320.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3643601 3644017 . - . ID=gene-NIV78_RS17035;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=NIV78_RS17035 NZ_CP100136.1 Protein Homology CDS 3643601 3644017 . - 0 ID=cds-WP_026051539.1;Parent=gene-NIV78_RS17035;Dbxref=Genbank:WP_026051539.1;Name=WP_026051539.1;Ontology_term=GO:0006396,GO:0004526;gbkey=CDS;gene=rnpA;go_function=ribonuclease P activity|0004526||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877349.1;locus_tag=NIV78_RS17035;product=ribonuclease P protein component;protein_id=WP_026051539.1;transl_table=11 NZ_CP100136.1 RefSeq gene 3644091 3644225 . - . ID=gene-NIV78_RS17040;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=NIV78_RS17040 NZ_CP100136.1 Protein Homology CDS 3644091 3644225 . - 0 ID=cds-WP_004198824.1;Parent=gene-NIV78_RS17040;Dbxref=Genbank:WP_004198824.1;Name=WP_004198824.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003816025.1;locus_tag=NIV78_RS17040;product=50S ribosomal protein L34;protein_id=WP_004198824.1;transl_table=11 ##sequence-region NZ_CP100137.1 1 2808990 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=337 NZ_CP100137.1 RefSeq region 1 2808990 . + . ID=NZ_CP100137.1:1..2808990;Dbxref=taxon:337;Is_circular=true;Name=2;chromosome=2;collection-date=2018;country=South Korea: Taean-gun;gbkey=Src;genome=chromosome;mol_type=genomic DNA;strain=R93 NZ_CP100137.1 RefSeq gene 101 763 . + . ID=gene-NIV78_RS17045;Name=NIV78_RS17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17045 NZ_CP100137.1 Protein Homology CDS 101 763 . + 0 ID=cds-WP_012732896.1;Parent=gene-NIV78_RS17045;Dbxref=Genbank:WP_012732896.1;Name=WP_012732896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900706.1;locus_tag=NIV78_RS17045;product=AAA family ATPase;protein_id=WP_012732896.1;transl_table=11 NZ_CP100137.1 RefSeq gene 788 1837 . + . ID=gene-NIV78_RS17050;Name=NIV78_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17050 NZ_CP100137.1 Protein Homology CDS 788 1837 . + 0 ID=cds-WP_012732897.1;Parent=gene-NIV78_RS17050;Dbxref=Genbank:WP_012732897.1;Name=WP_012732897.1;Ontology_term=GO:0000910,GO:0007059,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cytokinesis|0000910||IEA,chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732897.1;locus_tag=NIV78_RS17050;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_012732897.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2192 3571 . - . ID=gene-NIV78_RS17055;Name=NIV78_RS17055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17055 NZ_CP100137.1 Protein Homology CDS 2192 3571 . - 0 ID=cds-WP_012732898.1;Parent=gene-NIV78_RS17055;Dbxref=Genbank:WP_012732898.1;Name=WP_012732898.1;Ontology_term=GO:0006270,GO:0003887;gbkey=CDS;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004544877.1;locus_tag=NIV78_RS17055;product=RepB family plasmid replication initiator protein;protein_id=WP_012732898.1;transl_table=11 NZ_CP100137.1 RefSeq gene 3655 3948 . + . ID=gene-NIV78_RS17060;Name=NIV78_RS17060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17060 NZ_CP100137.1 GeneMarkS-2+ CDS 3655 3948 . + 0 ID=cds-WP_157384152.1;Parent=gene-NIV78_RS17060;Dbxref=Genbank:WP_157384152.1;Name=WP_157384152.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS17060;product=hypothetical protein;protein_id=WP_157384152.1;transl_table=11 NZ_CP100137.1 RefSeq gene 5981 7180 . + . ID=gene-NIV78_RS17065;Name=NIV78_RS17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17065 NZ_CP100137.1 Protein Homology CDS 5981 7180 . + 0 ID=cds-WP_043224971.1;Parent=gene-NIV78_RS17065;Dbxref=Genbank:WP_043224971.1;Name=WP_043224971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732899.1;locus_tag=NIV78_RS17065;product=DNA-binding protein;protein_id=WP_043224971.1;transl_table=11 NZ_CP100137.1 RefSeq gene 7265 8308 . - . ID=gene-NIV78_RS17070;Name=NIV78_RS17070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17070 NZ_CP100137.1 Protein Homology CDS 7265 8308 . - 0 ID=cds-WP_017922522.1;Parent=gene-NIV78_RS17070;Dbxref=Genbank:WP_017922522.1;Name=WP_017922522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424486.1;locus_tag=NIV78_RS17070;product=tyrosine-type recombinase/integrase;protein_id=WP_017922522.1;transl_table=11 NZ_CP100137.1 RefSeq gene 8434 8820 . - . ID=gene-NIV78_RS17075;Name=NIV78_RS17075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17075 NZ_CP100137.1 Protein Homology CDS 8434 8820 . - 0 ID=cds-WP_012732901.1;Parent=gene-NIV78_RS17075;Dbxref=Genbank:WP_012732901.1;Name=WP_012732901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013688821.1;locus_tag=NIV78_RS17075;product=DUF2471 family protein;protein_id=WP_012732901.1;transl_table=11 NZ_CP100137.1 RefSeq gene 8933 9538 . - . ID=gene-NIV78_RS17080;Name=NIV78_RS17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17080 NZ_CP100137.1 Protein Homology CDS 8933 9538 . - 0 ID=cds-WP_012732902.1;Parent=gene-NIV78_RS17080;Dbxref=Genbank:WP_012732902.1;Name=WP_012732902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009967364.1;locus_tag=NIV78_RS17080;product=XRE family transcriptional regulator;protein_id=WP_012732902.1;transl_table=11 NZ_CP100137.1 RefSeq gene 9700 10899 . + . ID=gene-NIV78_RS17085;Name=NIV78_RS17085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17085 NZ_CP100137.1 Protein Homology CDS 9700 10899 . + 0 ID=cds-WP_012732903.1;Parent=gene-NIV78_RS17085;Dbxref=Genbank:WP_012732903.1;Name=WP_012732903.1;Ontology_term=GO:0009058,GO:0008890,GO:0030170;gbkey=CDS;go_function=glycine C-acetyltransferase activity|0008890||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007178651.1;locus_tag=NIV78_RS17085;product=glycine C-acetyltransferase;protein_id=WP_012732903.1;transl_table=11 NZ_CP100137.1 RefSeq gene 10912 11955 . + . ID=gene-NIV78_RS17090;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=NIV78_RS17090 NZ_CP100137.1 Protein Homology CDS 10912 11955 . + 0 ID=cds-WP_012732904.1;Parent=gene-NIV78_RS17090;Dbxref=Genbank:WP_012732904.1;Name=WP_012732904.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424485.1;locus_tag=NIV78_RS17090;product=L-threonine 3-dehydrogenase;protein_id=WP_012732904.1;transl_table=11 NZ_CP100137.1 RefSeq gene 12017 12643 . - . ID=gene-NIV78_RS17095;Name=NIV78_RS17095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17095 NZ_CP100137.1 Protein Homology CDS 12017 12643 . - 0 ID=cds-WP_017922521.1;Parent=gene-NIV78_RS17095;Dbxref=Genbank:WP_017922521.1;Name=WP_017922521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424484.1;locus_tag=NIV78_RS17095;product=GNAT family N-acetyltransferase;protein_id=WP_017922521.1;transl_table=11 NZ_CP100137.1 RefSeq gene 12771 13445 . - . ID=gene-NIV78_RS17100;Name=NIV78_RS17100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17100 NZ_CP100137.1 Protein Homology CDS 12771 13445 . - 0 ID=cds-WP_017922520.1;Parent=gene-NIV78_RS17100;Dbxref=Genbank:WP_017922520.1;Name=WP_017922520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732906.1;locus_tag=NIV78_RS17100;product=YceI family protein;protein_id=WP_017922520.1;transl_table=11 NZ_CP100137.1 RefSeq gene 13580 14221 . + . ID=gene-NIV78_RS17105;Name=NIV78_RS17105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17105 NZ_CP100137.1 Protein Homology CDS 13580 14221 . + 0 ID=cds-WP_051008386.1;Parent=gene-NIV78_RS17105;Dbxref=Genbank:WP_051008386.1;Name=WP_051008386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732907.1;locus_tag=NIV78_RS17105;product=TetR/AcrR family transcriptional regulator;protein_id=WP_051008386.1;transl_table=11 NZ_CP100137.1 RefSeq gene 14275 14754 . + . ID=gene-NIV78_RS17110;Name=NIV78_RS17110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17110 NZ_CP100137.1 Protein Homology CDS 14275 14754 . + 0 ID=cds-WP_012732908.1;Parent=gene-NIV78_RS17110;Dbxref=Genbank:WP_012732908.1;Name=WP_012732908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009894511.1;locus_tag=NIV78_RS17110;product=nuclear transport factor 2 family protein;protein_id=WP_012732908.1;transl_table=11 NZ_CP100137.1 RefSeq gene 14926 16011 . - . ID=gene-NIV78_RS17115;Name=NIV78_RS17115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17115 NZ_CP100137.1 Protein Homology CDS 14926 16011 . - 0 ID=cds-WP_017922519.1;Parent=gene-NIV78_RS17115;Dbxref=Genbank:WP_017922519.1;Name=WP_017922519.1;Ontology_term=GO:0046395,GO:0009027;gbkey=CDS;go_function=tartrate dehydrogenase activity|0009027||IEA;go_process=carboxylic acid catabolic process|0046395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255150.1;locus_tag=NIV78_RS17115;product=tartrate dehydrogenase;protein_id=WP_017922519.1;transl_table=11 NZ_CP100137.1 RefSeq gene 16142 17053 . + . ID=gene-NIV78_RS17120;Name=NIV78_RS17120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17120 NZ_CP100137.1 Protein Homology CDS 16142 17053 . + 0 ID=cds-WP_017922518.1;Parent=gene-NIV78_RS17120;Dbxref=Genbank:WP_017922518.1;Name=WP_017922518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732910.1;locus_tag=NIV78_RS17120;product=LysR substrate-binding domain-containing protein;protein_id=WP_017922518.1;transl_table=11 NZ_CP100137.1 RefSeq gene 17421 18131 . - . ID=gene-NIV78_RS17125;Name=NIV78_RS17125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17125 NZ_CP100137.1 Protein Homology CDS 17421 18131 . - 0 ID=cds-WP_012732911.1;Parent=gene-NIV78_RS17125;Dbxref=Genbank:WP_012732911.1;Name=WP_012732911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732911.1;locus_tag=NIV78_RS17125;product=FadR family transcriptional regulator;protein_id=WP_012732911.1;transl_table=11 NZ_CP100137.1 RefSeq gene 18735 20084 . + . ID=gene-NIV78_RS17130;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=NIV78_RS17130 NZ_CP100137.1 Protein Homology CDS 18735 20084 . + 0 ID=cds-WP_043224969.1;Parent=gene-NIV78_RS17130;Dbxref=Genbank:WP_043224969.1;Name=WP_043224969.1;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020068871.1;locus_tag=NIV78_RS17130;product=glucarate dehydratase;protein_id=WP_043224969.1;transl_table=11 NZ_CP100137.1 RefSeq gene 20169 21086 . + . ID=gene-NIV78_RS17135;Name=kdgD;gbkey=Gene;gene=kdgD;gene_biotype=protein_coding;locus_tag=NIV78_RS17135 NZ_CP100137.1 Protein Homology CDS 20169 21086 . + 0 ID=cds-WP_012732913.1;Parent=gene-NIV78_RS17135;Dbxref=Genbank:WP_012732913.1;Name=WP_012732913.1;Ontology_term=GO:0047448;gbkey=CDS;gene=kdgD;go_function=5-dehydro-4-deoxyglucarate dehydratase activity|0047448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010094246.1;locus_tag=NIV78_RS17135;product=5-dehydro-4-deoxyglucarate dehydratase;protein_id=WP_012732913.1;transl_table=11 NZ_CP100137.1 RefSeq gene 21228 21692 . - . ID=gene-NIV78_RS17140;Name=NIV78_RS17140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17140 NZ_CP100137.1 Protein Homology CDS 21228 21692 . - 0 ID=cds-WP_251107706.1;Parent=gene-NIV78_RS17140;Dbxref=Genbank:WP_251107706.1;Name=WP_251107706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732914.1;locus_tag=NIV78_RS17140;product=signal peptide protein;protein_id=WP_251107706.1;transl_table=11 NZ_CP100137.1 RefSeq gene 21760 22971 . - . ID=gene-NIV78_RS17145;Name=NIV78_RS17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17145 NZ_CP100137.1 Protein Homology CDS 21760 22971 . - 0 ID=cds-WP_017923913.1;Parent=gene-NIV78_RS17145;Dbxref=Genbank:WP_017923913.1;Name=WP_017923913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194462.1;locus_tag=NIV78_RS17145;product=patatin-like phospholipase family protein;protein_id=WP_017923913.1;transl_table=11 NZ_CP100137.1 RefSeq gene 22968 23753 . - . ID=gene-NIV78_RS17150;Name=NIV78_RS17150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17150 NZ_CP100137.1 Protein Homology CDS 22968 23753 . - 0 ID=cds-WP_012732916.1;Parent=gene-NIV78_RS17150;Dbxref=Genbank:WP_012732916.1;Name=WP_012732916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604033.1;locus_tag=NIV78_RS17150;product=3-hydroxybutyrate dehydrogenase;protein_id=WP_012732916.1;transl_table=11 NZ_CP100137.1 RefSeq gene 23812 24552 . - . ID=gene-NIV78_RS17155;Name=NIV78_RS17155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17155 NZ_CP100137.1 Protein Homology CDS 23812 24552 . - 0 ID=cds-WP_012732917.1;Parent=gene-NIV78_RS17155;Dbxref=Genbank:WP_012732917.1;Name=WP_012732917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724247.1;locus_tag=NIV78_RS17155;product=acetoacetate decarboxylase;protein_id=WP_012732917.1;transl_table=11 NZ_CP100137.1 RefSeq gene 24989 25570 . + . ID=gene-NIV78_RS17160;Name=NIV78_RS17160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17160 NZ_CP100137.1 Protein Homology CDS 24989 25570 . + 0 ID=cds-WP_251107705.1;Parent=gene-NIV78_RS17160;Dbxref=Genbank:WP_251107705.1;Name=WP_251107705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732918.1;locus_tag=NIV78_RS17160;product=phosphatase PAP2 family protein;protein_id=WP_251107705.1;transl_table=11 NZ_CP100137.1 RefSeq gene 25673 25912 . - . ID=gene-NIV78_RS17165;Name=NIV78_RS17165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17165 NZ_CP100137.1 Protein Homology CDS 25673 25912 . - 0 ID=cds-WP_012732919.1;Parent=gene-NIV78_RS17165;Dbxref=Genbank:WP_012732919.1;Name=WP_012732919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732919.1;locus_tag=NIV78_RS17165;product=hypothetical protein;protein_id=WP_012732919.1;transl_table=11 NZ_CP100137.1 RefSeq gene 26177 27001 . - . ID=gene-NIV78_RS17170;Name=NIV78_RS17170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17170 NZ_CP100137.1 Protein Homology CDS 26177 27001 . - 0 ID=cds-WP_017924463.1;Parent=gene-NIV78_RS17170;Dbxref=Genbank:WP_017924463.1;Name=WP_017924463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485177.1;locus_tag=NIV78_RS17170;product=siderophore-interacting protein;protein_id=WP_017924463.1;transl_table=11 NZ_CP100137.1 RefSeq gene 27046 27702 . - . ID=gene-NIV78_RS17175;Name=NIV78_RS17175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17175 NZ_CP100137.1 Protein Homology CDS 27046 27702 . - 0 ID=cds-WP_169511633.1;Parent=gene-NIV78_RS17175;Dbxref=Genbank:WP_169511633.1;Name=WP_169511633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732921.1;locus_tag=NIV78_RS17175;product=PadR family transcriptional regulator;protein_id=WP_169511633.1;transl_table=11 NZ_CP100137.1 RefSeq gene 28195 29565 . - . ID=gene-NIV78_RS17180;Name=NIV78_RS17180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17180 NZ_CP100137.1 Protein Homology CDS 28195 29565 . - 0 ID=cds-WP_017924468.1;Parent=gene-NIV78_RS17180;Dbxref=Genbank:WP_017924468.1;Name=WP_017924468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732922.1;locus_tag=NIV78_RS17180;product=purine permease;protein_id=WP_017924468.1;transl_table=11 NZ_CP100137.1 RefSeq gene 29746 31284 . - . ID=gene-NIV78_RS17185;Name=NIV78_RS17185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17185 NZ_CP100137.1 GeneMarkS-2+ CDS 29746 31284 . - 0 ID=cds-WP_169511321.1;Parent=gene-NIV78_RS17185;Dbxref=Genbank:WP_169511321.1;Name=WP_169511321.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS17185;product=hypothetical protein;protein_id=WP_169511321.1;transl_table=11 NZ_CP100137.1 RefSeq gene 31488 31868 . - . ID=gene-NIV78_RS17190;Name=NIV78_RS17190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17190 NZ_CP100137.1 Protein Homology CDS 31488 31868 . - 0 ID=cds-WP_017922343.1;Parent=gene-NIV78_RS17190;Dbxref=Genbank:WP_017922343.1;Name=WP_017922343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732923.1;locus_tag=NIV78_RS17190;product=DUF3175 domain-containing protein;protein_id=WP_017922343.1;transl_table=11 NZ_CP100137.1 RefSeq gene 32168 32512 . - . ID=gene-NIV78_RS17195;Name=NIV78_RS17195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17195 NZ_CP100137.1 Protein Homology CDS 32168 32512 . - 0 ID=cds-WP_017922342.1;Parent=gene-NIV78_RS17195;Dbxref=Genbank:WP_017922342.1;Name=WP_017922342.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022172.2;locus_tag=NIV78_RS17195;product=DUF2513 domain-containing protein;protein_id=WP_017922342.1;transl_table=11 NZ_CP100137.1 RefSeq gene 32570 32944 . - . ID=gene-NIV78_RS17200;Name=NIV78_RS17200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17200 NZ_CP100137.1 Protein Homology CDS 32570 32944 . - 0 ID=cds-WP_017922341.1;Parent=gene-NIV78_RS17200;Dbxref=Genbank:WP_017922341.1;Name=WP_017922341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015985055.1;locus_tag=NIV78_RS17200;product=DNA-binding protein;protein_id=WP_017922341.1;transl_table=11 NZ_CP100137.1 RefSeq gene 32941 33300 . - . ID=gene-NIV78_RS17205;Name=NIV78_RS17205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17205 NZ_CP100137.1 Protein Homology CDS 32941 33300 . - 0 ID=cds-WP_241766769.1;Parent=gene-NIV78_RS17205;Dbxref=Genbank:WP_241766769.1;Name=WP_241766769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015985046.1;locus_tag=NIV78_RS17205;product=DUF1018 domain-containing protein;protein_id=WP_241766769.1;transl_table=11 NZ_CP100137.1 RefSeq gene 33365 33706 . - . ID=gene-NIV78_RS17210;Name=NIV78_RS17210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17210 NZ_CP100137.1 Protein Homology CDS 33365 33706 . - 0 ID=cds-WP_017922339.1;Parent=gene-NIV78_RS17210;Dbxref=Genbank:WP_017922339.1;Name=WP_017922339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493773.1;locus_tag=NIV78_RS17210;product=DUF2528 family protein;protein_id=WP_017922339.1;transl_table=11 NZ_CP100137.1 RefSeq gene 33812 34084 . - . ID=gene-NIV78_RS17215;Name=NIV78_RS17215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17215 NZ_CP100137.1 Protein Homology CDS 33812 34084 . - 0 ID=cds-WP_017922338.1;Parent=gene-NIV78_RS17215;Dbxref=Genbank:WP_017922338.1;Name=WP_017922338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900354.1;locus_tag=NIV78_RS17215;product=HU family DNA-binding protein;protein_id=WP_017922338.1;transl_table=11 NZ_CP100137.1 RefSeq gene 34148 34765 . - . ID=gene-NIV78_RS17220;Name=NIV78_RS17220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17220 NZ_CP100137.1 Protein Homology CDS 34148 34765 . - 0 ID=cds-WP_017922337.1;Parent=gene-NIV78_RS17220;Dbxref=Genbank:WP_017922337.1;Name=WP_017922337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910737.1;locus_tag=NIV78_RS17220;product=DUF3164 family protein;protein_id=WP_017922337.1;transl_table=11 NZ_CP100137.1 RefSeq gene 34889 35098 . - . ID=gene-NIV78_RS17225;Name=NIV78_RS17225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17225 NZ_CP100137.1 GeneMarkS-2+ CDS 34889 35098 . - 0 ID=cds-WP_017922336.1;Parent=gene-NIV78_RS17225;Dbxref=Genbank:WP_017922336.1;Name=WP_017922336.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS17225;product=hypothetical protein;protein_id=WP_017922336.1;transl_table=11 NZ_CP100137.1 RefSeq gene 35145 35366 . - . ID=gene-NIV78_RS17230;Name=NIV78_RS17230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17230 NZ_CP100137.1 GeneMarkS-2+ CDS 35145 35366 . - 0 ID=cds-WP_017922335.1;Parent=gene-NIV78_RS17230;Dbxref=Genbank:WP_017922335.1;Name=WP_017922335.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS17230;product=hypothetical protein;protein_id=WP_017922335.1;transl_table=11 NZ_CP100137.1 RefSeq gene 35360 35611 . - . ID=gene-NIV78_RS17235;Name=NIV78_RS17235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17235 NZ_CP100137.1 GeneMarkS-2+ CDS 35360 35611 . - 0 ID=cds-WP_157384057.1;Parent=gene-NIV78_RS17235;Dbxref=Genbank:WP_157384057.1;Name=WP_157384057.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS17235;product=hypothetical protein;protein_id=WP_157384057.1;transl_table=11 NZ_CP100137.1 RefSeq gene 35608 35937 . - . ID=gene-NIV78_RS17240;Name=NIV78_RS17240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17240 NZ_CP100137.1 Protein Homology CDS 35608 35937 . - 0 ID=cds-WP_080630111.1;Parent=gene-NIV78_RS17240;Dbxref=Genbank:WP_080630111.1;Name=WP_080630111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910739.1;locus_tag=NIV78_RS17240;product=hypothetical protein;protein_id=WP_080630111.1;transl_table=11 NZ_CP100137.1 RefSeq gene 35939 37153 . - . ID=gene-NIV78_RS17245;Name=NIV78_RS17245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17245 NZ_CP100137.1 Protein Homology CDS 35939 37153 . - 0 ID=cds-WP_257757684.1;Parent=gene-NIV78_RS17245;Dbxref=Genbank:WP_257757684.1;Name=WP_257757684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485392.1;locus_tag=NIV78_RS17245;product=AAA family ATPase;protein_id=WP_257757684.1;transl_table=11 NZ_CP100137.1 RefSeq gene 37150 38949 . - . ID=gene-NIV78_RS17250;Name=NIV78_RS17250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17250 NZ_CP100137.1 Protein Homology CDS 37150 38949 . - 0 ID=cds-WP_017922333.1;Parent=gene-NIV78_RS17250;Dbxref=Genbank:WP_017922333.1;Name=WP_017922333.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485354.1;locus_tag=NIV78_RS17250;product=DDE-type integrase/transposase/recombinase;protein_id=WP_017922333.1;transl_table=11 NZ_CP100137.1 RefSeq gene 38953 39999 . - . ID=gene-NIV78_RS17255;Name=NIV78_RS17255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17255 NZ_CP100137.1 Protein Homology CDS 38953 39999 . - 0 ID=cds-WP_198292395.1;Parent=gene-NIV78_RS17255;Dbxref=Genbank:WP_198292395.1;Name=WP_198292395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013518896.1;locus_tag=NIV78_RS17255;product=hypothetical protein;protein_id=WP_198292395.1;transl_table=11 NZ_CP100137.1 RefSeq gene 40015 40323 . - . ID=gene-NIV78_RS17260;Name=NIV78_RS17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17260 NZ_CP100137.1 Protein Homology CDS 40015 40323 . - 0 ID=cds-WP_017922330.1;Parent=gene-NIV78_RS17260;Dbxref=Genbank:WP_017922330.1;Name=WP_017922330.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910747.1;locus_tag=NIV78_RS17260;product=helix-turn-helix domain-containing protein;protein_id=WP_017922330.1;transl_table=11 NZ_CP100137.1 RefSeq gene 40635 40838 . - . ID=gene-NIV78_RS17265;Name=NIV78_RS17265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17265 NZ_CP100137.1 Protein Homology CDS 40635 40838 . - 0 ID=cds-WP_017922328.1;Parent=gene-NIV78_RS17265;Dbxref=Genbank:WP_017922328.1;Name=WP_017922328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013232271.1;locus_tag=NIV78_RS17265;product=hypothetical protein;protein_id=WP_017922328.1;transl_table=11 NZ_CP100137.1 RefSeq gene 40922 41461 . + . ID=gene-NIV78_RS17270;Name=NIV78_RS17270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17270 NZ_CP100137.1 GeneMarkS-2+ CDS 40922 41461 . + 0 ID=cds-WP_017922327.1;Parent=gene-NIV78_RS17270;Dbxref=Genbank:WP_017922327.1;Name=WP_017922327.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS17270;product=hypothetical protein;protein_id=WP_017922327.1;transl_table=11 NZ_CP100137.1 RefSeq gene 41608 41955 . + . ID=gene-NIV78_RS17275;Name=NIV78_RS17275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17275 NZ_CP100137.1 Protein Homology CDS 41608 41955 . + 0 ID=cds-WP_017922326.1;Parent=gene-NIV78_RS17275;Dbxref=Genbank:WP_017922326.1;Name=WP_017922326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485400.1;locus_tag=NIV78_RS17275;product=putative holin;protein_id=WP_017922326.1;transl_table=11 NZ_CP100137.1 RefSeq gene 41958 42566 . + . ID=gene-NIV78_RS17280;Name=NIV78_RS17280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17280 NZ_CP100137.1 Protein Homology CDS 41958 42566 . + 0 ID=cds-WP_017922325.1;Parent=gene-NIV78_RS17280;Dbxref=Genbank:WP_017922325.1;Name=WP_017922325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015985075.1;locus_tag=NIV78_RS17280;product=transglycosylase SLT domain-containing protein;protein_id=WP_017922325.1;transl_table=11 NZ_CP100137.1 RefSeq gene 42557 43135 . + . ID=gene-NIV78_RS17285;Name=NIV78_RS17285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17285 NZ_CP100137.1 Protein Homology CDS 42557 43135 . + 0 ID=cds-WP_017922324.1;Parent=gene-NIV78_RS17285;Dbxref=Genbank:WP_017922324.1;Name=WP_017922324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485363.1;locus_tag=NIV78_RS17285;product=hypothetical protein;protein_id=WP_017922324.1;transl_table=11 NZ_CP100137.1 RefSeq gene 43132 43470 . + . ID=gene-NIV78_RS17290;Name=NIV78_RS17290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17290 NZ_CP100137.1 Protein Homology CDS 43132 43470 . + 0 ID=cds-WP_017922323.1;Parent=gene-NIV78_RS17290;Dbxref=Genbank:WP_017922323.1;Name=WP_017922323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485409.1;locus_tag=NIV78_RS17290;product=hypothetical protein;protein_id=WP_017922323.1;transl_table=11 NZ_CP100137.1 RefSeq gene 43467 43799 . + . ID=gene-NIV78_RS17295;Name=NIV78_RS17295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17295 NZ_CP100137.1 Protein Homology CDS 43467 43799 . + 0 ID=cds-WP_017922322.1;Parent=gene-NIV78_RS17295;Dbxref=Genbank:WP_017922322.1;Name=WP_017922322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485389.1;locus_tag=NIV78_RS17295;product=hypothetical protein;protein_id=WP_017922322.1;transl_table=11 NZ_CP100137.1 RefSeq gene 43801 44346 . + . ID=gene-NIV78_RS17300;Name=NIV78_RS17300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17300 NZ_CP100137.1 Protein Homology CDS 43801 44346 . + 0 ID=cds-WP_017922321.1;Parent=gene-NIV78_RS17300;Dbxref=Genbank:WP_017922321.1;Name=WP_017922321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485391.1;locus_tag=NIV78_RS17300;product=DUF3486 family protein;protein_id=WP_017922321.1;transl_table=11 NZ_CP100137.1 RefSeq gene 44343 45845 . + . ID=gene-NIV78_RS17305;Name=NIV78_RS17305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17305 NZ_CP100137.1 Protein Homology CDS 44343 45845 . + 0 ID=cds-WP_017922320.1;Parent=gene-NIV78_RS17305;Dbxref=Genbank:WP_017922320.1;Name=WP_017922320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485377.1;locus_tag=NIV78_RS17305;product=terminase family protein;protein_id=WP_017922320.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 45959 47319 . + . ID=gene-NIV78_RS17310;Name=NIV78_RS17310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS17310;pseudo=true NZ_CP100137.1 Protein Homology CDS 45959 47319 . + 0 ID=cds-NIV78_RS17310;Parent=gene-NIV78_RS17310;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017850.2;locus_tag=NIV78_RS17310;product=DUF935 domain-containing protein;pseudo=true;transl_table=11 NZ_CP100137.1 RefSeq gene 47312 48148 . + . ID=gene-NIV78_RS17315;Name=NIV78_RS17315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17315 NZ_CP100137.1 Protein Homology CDS 47312 48148 . + 0 ID=cds-WP_017922319.1;Parent=gene-NIV78_RS17315;Dbxref=Genbank:WP_017922319.1;Name=WP_017922319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485383.1;locus_tag=NIV78_RS17315;product=phage minor head protein;protein_id=WP_017922319.1;transl_table=11 NZ_CP100137.1 RefSeq gene 48145 48672 . + . ID=gene-NIV78_RS17320;Name=NIV78_RS17320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17320 NZ_CP100137.1 Protein Homology CDS 48145 48672 . + 0 ID=cds-WP_017922318.1;Parent=gene-NIV78_RS17320;Dbxref=Genbank:WP_017922318.1;Name=WP_017922318.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910771.1;locus_tag=NIV78_RS17320;product=phage virion morphogenesis protein;protein_id=WP_017922318.1;transl_table=11 NZ_CP100137.1 RefSeq gene 48873 50003 . + . ID=gene-NIV78_RS17325;Name=NIV78_RS17325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17325 NZ_CP100137.1 Protein Homology CDS 48873 50003 . + 0 ID=cds-WP_017922317.1;Parent=gene-NIV78_RS17325;Dbxref=Genbank:WP_017922317.1;Name=WP_017922317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493764.1;locus_tag=NIV78_RS17325;product=hypothetical protein;protein_id=WP_017922317.1;transl_table=11 NZ_CP100137.1 RefSeq gene 50046 50972 . + . ID=gene-NIV78_RS17330;Name=NIV78_RS17330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17330 NZ_CP100137.1 Protein Homology CDS 50046 50972 . + 0 ID=cds-WP_017922316.1;Parent=gene-NIV78_RS17330;Dbxref=Genbank:WP_017922316.1;Name=WP_017922316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910774.1;locus_tag=NIV78_RS17330;product=hypothetical protein;protein_id=WP_017922316.1;transl_table=11 NZ_CP100137.1 RefSeq gene 51041 51379 . + . ID=gene-NIV78_RS17335;Name=NIV78_RS17335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17335 NZ_CP100137.1 Protein Homology CDS 51041 51379 . + 0 ID=cds-WP_017922315.1;Parent=gene-NIV78_RS17335;Dbxref=Genbank:WP_017922315.1;Name=WP_017922315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485381.1;locus_tag=NIV78_RS17335;product=DUF2190 family protein;protein_id=WP_017922315.1;transl_table=11 NZ_CP100137.1 RefSeq gene 51381 51833 . + . ID=gene-NIV78_RS17340;Name=NIV78_RS17340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17340 NZ_CP100137.1 Protein Homology CDS 51381 51833 . + 0 ID=cds-WP_017922314.1;Parent=gene-NIV78_RS17340;Dbxref=Genbank:WP_017922314.1;Name=WP_017922314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910777.1;locus_tag=NIV78_RS17340;product=DUF1320 domain-containing protein;protein_id=WP_017922314.1;transl_table=11 NZ_CP100137.1 RefSeq gene 51833 52297 . + . ID=gene-NIV78_RS17345;Name=NIV78_RS17345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17345 NZ_CP100137.1 Protein Homology CDS 51833 52297 . + 0 ID=cds-WP_251107703.1;Parent=gene-NIV78_RS17345;Dbxref=Genbank:WP_251107703.1;Name=WP_251107703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910779.1;locus_tag=NIV78_RS17345;product=Gp37 family protein;protein_id=WP_251107703.1;transl_table=11 NZ_CP100137.1 RefSeq gene 52294 52539 . + . ID=gene-NIV78_RS17350;Name=NIV78_RS17350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17350 NZ_CP100137.1 Protein Homology CDS 52294 52539 . + 0 ID=cds-WP_017922312.1;Parent=gene-NIV78_RS17350;Dbxref=Genbank:WP_017922312.1;Name=WP_017922312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910780.1;locus_tag=NIV78_RS17350;product=hypothetical protein;protein_id=WP_017922312.1;transl_table=11 NZ_CP100137.1 RefSeq gene 52612 53973 . + . ID=gene-NIV78_RS17355;Name=NIV78_RS17355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17355 NZ_CP100137.1 Protein Homology CDS 52612 53973 . + 0 ID=cds-WP_257757692.1;Parent=gene-NIV78_RS17355;Dbxref=Genbank:WP_257757692.1;Name=WP_257757692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485369.1;locus_tag=NIV78_RS17355;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_257757692.1;transl_table=11 NZ_CP100137.1 RefSeq gene 53975 54499 . + . ID=gene-NIV78_RS17360;Name=NIV78_RS17360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17360 NZ_CP100137.1 Protein Homology CDS 53975 54499 . + 0 ID=cds-WP_017922310.1;Parent=gene-NIV78_RS17360;Dbxref=Genbank:WP_017922310.1;Name=WP_017922310.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485397.1;locus_tag=NIV78_RS17360;product=phage major tail tube protein;protein_id=WP_017922310.1;transl_table=11 NZ_CP100137.1 RefSeq gene 54625 54954 . + . ID=gene-NIV78_RS17365;Name=NIV78_RS17365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17365 NZ_CP100137.1 Protein Homology CDS 54625 54954 . + 0 ID=cds-WP_080630108.1;Parent=gene-NIV78_RS17365;Dbxref=Genbank:WP_080630108.1;Name=WP_080630108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015985077.1;locus_tag=NIV78_RS17365;product=phage tail assembly protein;protein_id=WP_080630108.1;transl_table=11 NZ_CP100137.1 RefSeq gene 55087 55329 . - . ID=gene-NIV78_RS17370;Name=NIV78_RS17370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17370 NZ_CP100137.1 Protein Homology CDS 55087 55329 . - 0 ID=cds-WP_017922307.1;Parent=gene-NIV78_RS17370;Dbxref=Genbank:WP_017922307.1;Name=WP_017922307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910787.1;locus_tag=NIV78_RS17370;product=hypothetical protein;protein_id=WP_017922307.1;transl_table=11 NZ_CP100137.1 RefSeq gene 55358 57970 . + . ID=gene-NIV78_RS17375;Name=NIV78_RS17375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17375 NZ_CP100137.1 Protein Homology CDS 55358 57970 . + 0 ID=cds-WP_251107702.1;Parent=gene-NIV78_RS17375;Dbxref=Genbank:WP_251107702.1;Name=WP_251107702.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485356.1;locus_tag=NIV78_RS17375;product=phage tail tape measure protein;protein_id=WP_251107702.1;transl_table=11 NZ_CP100137.1 RefSeq gene 57972 58862 . + . ID=gene-NIV78_RS17380;Name=NIV78_RS17380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17380 NZ_CP100137.1 Protein Homology CDS 57972 58862 . + 0 ID=cds-WP_017922305.1;Parent=gene-NIV78_RS17380;Dbxref=Genbank:WP_017922305.1;Name=WP_017922305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485408.1;locus_tag=NIV78_RS17380;product=phage tail protein;protein_id=WP_017922305.1;transl_table=11 NZ_CP100137.1 RefSeq gene 58862 59071 . + . ID=gene-NIV78_RS17385;Name=NIV78_RS17385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17385 NZ_CP100137.1 Protein Homology CDS 58862 59071 . + 0 ID=cds-WP_017922304.1;Parent=gene-NIV78_RS17385;Dbxref=Genbank:WP_017922304.1;Name=WP_017922304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485366.1;locus_tag=NIV78_RS17385;product=tail protein X;protein_id=WP_017922304.1;transl_table=11 NZ_CP100137.1 RefSeq gene 59068 60264 . + . ID=gene-NIV78_RS17390;Name=NIV78_RS17390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17390 NZ_CP100137.1 Protein Homology CDS 59068 60264 . + 0 ID=cds-WP_257757695.1;Parent=gene-NIV78_RS17390;Dbxref=Genbank:WP_257757695.1;Name=WP_257757695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485372.1;locus_tag=NIV78_RS17390;product=contractile injection system protein%2C VgrG/Pvc8 family;protein_id=WP_257757695.1;transl_table=11 NZ_CP100137.1 RefSeq gene 60261 60863 . + . ID=gene-NIV78_RS17395;Name=NIV78_RS17395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17395 NZ_CP100137.1 Protein Homology CDS 60261 60863 . + 0 ID=cds-WP_017922302.1;Parent=gene-NIV78_RS17395;Dbxref=Genbank:WP_017922302.1;Name=WP_017922302.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910796.1;locus_tag=NIV78_RS17395;product=phage baseplate assembly protein V;protein_id=WP_017922302.1;transl_table=11 NZ_CP100137.1 RefSeq gene 60917 61270 . + . ID=gene-NIV78_RS17400;Name=NIV78_RS17400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17400 NZ_CP100137.1 Protein Homology CDS 60917 61270 . + 0 ID=cds-WP_017922301.1;Parent=gene-NIV78_RS17400;Dbxref=Genbank:WP_017922301.1;Name=WP_017922301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485365.1;locus_tag=NIV78_RS17400;product=GPW/gp25 family protein;protein_id=WP_017922301.1;transl_table=11 NZ_CP100137.1 RefSeq gene 61267 62418 . + . ID=gene-NIV78_RS17405;Name=NIV78_RS17405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17405 NZ_CP100137.1 Protein Homology CDS 61267 62418 . + 0 ID=cds-WP_017922300.1;Parent=gene-NIV78_RS17405;Dbxref=Genbank:WP_017922300.1;Name=WP_017922300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910798.1;locus_tag=NIV78_RS17405;product=baseplate J/gp47 family protein;protein_id=WP_017922300.1;transl_table=11 NZ_CP100137.1 RefSeq gene 62411 62992 . + . ID=gene-NIV78_RS17410;Name=NIV78_RS17410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17410 NZ_CP100137.1 Protein Homology CDS 62411 62992 . + 0 ID=cds-WP_017922299.1;Parent=gene-NIV78_RS17410;Dbxref=Genbank:WP_017922299.1;Name=WP_017922299.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493761.1;locus_tag=NIV78_RS17410;product=phage tail protein I;protein_id=WP_017922299.1;transl_table=11 NZ_CP100137.1 RefSeq gene 62992 63909 . + . ID=gene-NIV78_RS17415;Name=NIV78_RS17415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17415 NZ_CP100137.1 GeneMarkS-2+ CDS 62992 63909 . + 0 ID=cds-WP_017922298.1;Parent=gene-NIV78_RS17415;Dbxref=Genbank:WP_017922298.1;Name=WP_017922298.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS17415;product=hypothetical protein;protein_id=WP_017922298.1;transl_table=11 NZ_CP100137.1 RefSeq gene 63918 64343 . + . ID=gene-NIV78_RS17420;Name=NIV78_RS17420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17420 NZ_CP100137.1 Protein Homology CDS 63918 64343 . + 0 ID=cds-WP_017922297.1;Parent=gene-NIV78_RS17420;Dbxref=Genbank:WP_017922297.1;Name=WP_017922297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254751.1;locus_tag=NIV78_RS17420;product=tail assembly chaperone;protein_id=WP_017922297.1;transl_table=11 NZ_CP100137.1 RefSeq gene 64534 64779 . + . ID=gene-NIV78_RS17425;Name=NIV78_RS17425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17425 NZ_CP100137.1 Protein Homology CDS 64534 64779 . + 0 ID=cds-WP_080630107.1;Parent=gene-NIV78_RS17425;Dbxref=Genbank:WP_080630107.1;Name=WP_080630107.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021626.2;locus_tag=NIV78_RS17425;product=Com family DNA-binding transcriptional regulator;protein_id=WP_080630107.1;transl_table=11 NZ_CP100137.1 RefSeq gene 64736 64900 . + . ID=gene-NIV78_RS17430;Name=NIV78_RS17430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17430 NZ_CP100137.1 Protein Homology CDS 64736 64900 . + 0 ID=cds-WP_017922296.1;Parent=gene-NIV78_RS17430;Dbxref=Genbank:WP_017922296.1;Name=WP_017922296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008164624.1;locus_tag=NIV78_RS17430;product=hypothetical protein;protein_id=WP_017922296.1;transl_table=11 NZ_CP100137.1 RefSeq gene 64897 66024 . + . ID=gene-NIV78_RS17435;Name=NIV78_RS17435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17435 NZ_CP100137.1 Protein Homology CDS 64897 66024 . + 0 ID=cds-WP_257757697.1;Parent=gene-NIV78_RS17435;Dbxref=Genbank:WP_257757697.1;Name=WP_257757697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008164625.1;locus_tag=NIV78_RS17435;product=ABC transporter ATP-binding protein;protein_id=WP_257757697.1;transl_table=11 NZ_CP100137.1 RefSeq gene 66015 66629 . + . ID=gene-NIV78_RS17440;Name=NIV78_RS17440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17440 NZ_CP100137.1 Protein Homology CDS 66015 66629 . + 0 ID=cds-WP_017922294.1;Parent=gene-NIV78_RS17440;Dbxref=Genbank:WP_017922294.1;Name=WP_017922294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008164626.1;locus_tag=NIV78_RS17440;product=methionyl-tRNA formyltransferase;protein_id=WP_017922294.1;transl_table=11 NZ_CP100137.1 RefSeq gene 66782 68590 . - . ID=gene-NIV78_RS17445;Name=NIV78_RS17445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17445 NZ_CP100137.1 Protein Homology CDS 66782 68590 . - 0 ID=cds-WP_251107700.1;Parent=gene-NIV78_RS17445;Dbxref=Genbank:WP_251107700.1;Name=WP_251107700.1;Ontology_term=GO:0000287,GO:0030976;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732924.1;locus_tag=NIV78_RS17445;product=thiamine pyrophosphate-requiring protein;protein_id=WP_251107700.1;transl_table=11 NZ_CP100137.1 RefSeq gene 68999 70498 . + . ID=gene-NIV78_RS17450;Name=NIV78_RS17450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17450 NZ_CP100137.1 Protein Homology CDS 68999 70498 . + 0 ID=cds-WP_251118962.1;Parent=gene-NIV78_RS17450;Dbxref=Genbank:WP_251118962.1;Name=WP_251118962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732925.1;locus_tag=NIV78_RS17450;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_251118962.1;transl_table=11 NZ_CP100137.1 RefSeq gene 70602 72182 . + . ID=gene-NIV78_RS17455;Name=NIV78_RS17455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17455 NZ_CP100137.1 Protein Homology CDS 70602 72182 . + 0 ID=cds-WP_012732926.1;Parent=gene-NIV78_RS17455;Dbxref=Genbank:WP_012732926.1;Name=WP_012732926.1;Ontology_term=GO:0006855,GO:0009410,GO:0005887;gbkey=CDS;go_component=integral component of plasma membrane|0005887||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA,response to xenobiotic stimulus|0009410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410205.1;locus_tag=NIV78_RS17455;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_012732926.1;transl_table=11 NZ_CP100137.1 RefSeq gene 72184 73881 . + . ID=gene-NIV78_RS17460;Name=NIV78_RS17460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17460 NZ_CP100137.1 Protein Homology CDS 72184 73881 . + 0 ID=cds-WP_251107698.1;Parent=gene-NIV78_RS17460;Dbxref=Genbank:WP_251107698.1;Name=WP_251107698.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732927.1;locus_tag=NIV78_RS17460;product=efflux transporter outer membrane subunit;protein_id=WP_251107698.1;transl_table=11 NZ_CP100137.1 RefSeq gene 73938 74654 . - . ID=gene-NIV78_RS17465;Name=NIV78_RS17465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17465 NZ_CP100137.1 Protein Homology CDS 73938 74654 . - 0 ID=cds-WP_153478402.1;Parent=gene-NIV78_RS17465;Dbxref=Genbank:WP_153478402.1;Name=WP_153478402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732928.1;locus_tag=NIV78_RS17465;product=MgtC/SapB family protein;protein_id=WP_153478402.1;transl_table=11 NZ_CP100137.1 RefSeq gene 74948 75274 . + . ID=gene-NIV78_RS17470;Name=NIV78_RS17470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17470 NZ_CP100137.1 GeneMarkS-2+ CDS 74948 75274 . + 0 ID=cds-WP_039204549.1;Parent=gene-NIV78_RS17470;Dbxref=Genbank:WP_039204549.1;Name=WP_039204549.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS17470;product=hypothetical protein;protein_id=WP_039204549.1;transl_table=11 NZ_CP100137.1 RefSeq gene 75393 75842 . - . ID=gene-NIV78_RS17475;Name=NIV78_RS17475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17475 NZ_CP100137.1 Protein Homology CDS 75393 75842 . - 0 ID=cds-WP_153478404.1;Parent=gene-NIV78_RS17475;Dbxref=Genbank:WP_153478404.1;Name=WP_153478404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732929.1;locus_tag=NIV78_RS17475;product=PRC-barrel domain containing protein;protein_id=WP_153478404.1;transl_table=11 NZ_CP100137.1 RefSeq gene 76111 77079 . - . ID=gene-NIV78_RS17480;Name=NIV78_RS17480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17480 NZ_CP100137.1 Protein Homology CDS 76111 77079 . - 0 ID=cds-WP_012732930.1;Parent=gene-NIV78_RS17480;Dbxref=Genbank:WP_012732930.1;Name=WP_012732930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732930.1;locus_tag=NIV78_RS17480;product=sigma-54 dependent transcriptional regulator;protein_id=WP_012732930.1;transl_table=11 NZ_CP100137.1 RefSeq gene 77417 78799 . + . ID=gene-NIV78_RS17485;Name=NIV78_RS17485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17485 NZ_CP100137.1 Protein Homology CDS 77417 78799 . + 0 ID=cds-WP_012732931.1;Parent=gene-NIV78_RS17485;Dbxref=Genbank:WP_012732931.1;Name=WP_012732931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697386.1;locus_tag=NIV78_RS17485;product=sigma-54 dependent transcriptional regulator;protein_id=WP_012732931.1;transl_table=11 NZ_CP100137.1 RefSeq gene 78864 80114 . - . ID=gene-NIV78_RS17490;Name=NIV78_RS17490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17490 NZ_CP100137.1 Protein Homology CDS 78864 80114 . - 0 ID=cds-WP_026051558.1;Parent=gene-NIV78_RS17490;Dbxref=Genbank:WP_026051558.1;Name=WP_026051558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013688899.1;locus_tag=NIV78_RS17490;product=phosphatidylserine decarboxylase family protein;protein_id=WP_026051558.1;transl_table=11 NZ_CP100137.1 RefSeq gene 80222 80725 . - . ID=gene-NIV78_RS17495;Name=NIV78_RS17495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17495 NZ_CP100137.1 Protein Homology CDS 80222 80725 . - 0 ID=cds-WP_012732933.1;Parent=gene-NIV78_RS17495;Dbxref=Genbank:WP_012732933.1;Name=WP_012732933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732933.1;locus_tag=NIV78_RS17495;product=DUF2591 family protein;protein_id=WP_012732933.1;transl_table=11 NZ_CP100137.1 RefSeq gene 80924 81442 . - . ID=gene-NIV78_RS17500;Name=NIV78_RS17500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17500 NZ_CP100137.1 Protein Homology CDS 80924 81442 . - 0 ID=cds-WP_012732934.1;Parent=gene-NIV78_RS17500;Dbxref=Genbank:WP_012732934.1;Name=WP_012732934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732934.1;locus_tag=NIV78_RS17500;product=ferritin-like domain-containing protein;protein_id=WP_012732934.1;transl_table=11 NZ_CP100137.1 RefSeq gene 81719 82120 . + . ID=gene-NIV78_RS17505;Name=NIV78_RS17505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17505 NZ_CP100137.1 GeneMarkS-2+ CDS 81719 82120 . + 0 ID=cds-WP_251107697.1;Parent=gene-NIV78_RS17505;Dbxref=Genbank:WP_251107697.1;Name=WP_251107697.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS17505;product=hypothetical protein;protein_id=WP_251107697.1;transl_table=11 NZ_CP100137.1 RefSeq gene 82321 82626 . + . ID=gene-NIV78_RS17510;Name=NIV78_RS17510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17510 NZ_CP100137.1 Protein Homology CDS 82321 82626 . + 0 ID=cds-WP_017924165.1;Parent=gene-NIV78_RS17510;Dbxref=Genbank:WP_017924165.1;Name=WP_017924165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732935.1;locus_tag=NIV78_RS17510;product=hypothetical protein;protein_id=WP_017924165.1;transl_table=11 NZ_CP100137.1 RefSeq gene 83176 83364 . + . ID=gene-NIV78_RS17515;Name=NIV78_RS17515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17515 NZ_CP100137.1 Protein Homology CDS 83176 83364 . + 0 ID=cds-WP_012732936.1;Parent=gene-NIV78_RS17515;Dbxref=Genbank:WP_012732936.1;Name=WP_012732936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498333.1;locus_tag=NIV78_RS17515;product=DUF3008 family protein;protein_id=WP_012732936.1;transl_table=11 NZ_CP100137.1 RefSeq gene 83411 83572 . + . ID=gene-NIV78_RS17520;Name=NIV78_RS17520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17520 NZ_CP100137.1 Protein Homology CDS 83411 83572 . + 0 ID=cds-WP_012732937.1;Parent=gene-NIV78_RS17520;Dbxref=Genbank:WP_012732937.1;Name=WP_012732937.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735230.1;locus_tag=NIV78_RS17520;product=DUF1328 domain-containing protein;protein_id=WP_012732937.1;transl_table=11 NZ_CP100137.1 RefSeq gene 83641 84960 . - . ID=gene-NIV78_RS17525;Name=NIV78_RS17525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17525 NZ_CP100137.1 Protein Homology CDS 83641 84960 . - 0 ID=cds-WP_035982045.1;Parent=gene-NIV78_RS17525;Dbxref=Genbank:WP_035982045.1;Name=WP_035982045.1;Ontology_term=GO:0006812,GO:0055085,GO:0015299,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=solute:proton antiporter activity|0015299||IEA;go_process=cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004529423.1;locus_tag=NIV78_RS17525;product=cation:proton antiporter;protein_id=WP_035982045.1;transl_table=11 NZ_CP100137.1 RefSeq gene 85312 85632 . + . ID=gene-NIV78_RS17530;Name=NIV78_RS17530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17530 NZ_CP100137.1 Protein Homology CDS 85312 85632 . + 0 ID=cds-WP_012732939.1;Parent=gene-NIV78_RS17530;Dbxref=Genbank:WP_012732939.1;Name=WP_012732939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732939.1;locus_tag=NIV78_RS17530;product=DUF2795 domain-containing protein;protein_id=WP_012732939.1;transl_table=11 NZ_CP100137.1 RefSeq gene 85815 86525 . + . ID=gene-NIV78_RS17535;Name=NIV78_RS17535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17535 NZ_CP100137.1 Protein Homology CDS 85815 86525 . + 0 ID=cds-WP_017923099.1;Parent=gene-NIV78_RS17535;Dbxref=Genbank:WP_017923099.1;Name=WP_017923099.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424522.1;locus_tag=NIV78_RS17535;product=GNAT family N-acetyltransferase;protein_id=WP_017923099.1;transl_table=11 NZ_CP100137.1 RefSeq gene 86613 87179 . + . ID=gene-NIV78_RS17540;Name=NIV78_RS17540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17540 NZ_CP100137.1 Protein Homology CDS 86613 87179 . + 0 ID=cds-WP_012732941.1;Parent=gene-NIV78_RS17540;Dbxref=Genbank:WP_012732941.1;Name=WP_012732941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732941.1;locus_tag=NIV78_RS17540;product=TetR/AcrR family transcriptional regulator;protein_id=WP_012732941.1;transl_table=11 NZ_CP100137.1 RefSeq gene 87358 87783 . + . ID=gene-NIV78_RS17545;Name=NIV78_RS17545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17545 NZ_CP100137.1 Protein Homology CDS 87358 87783 . + 0 ID=cds-WP_257757701.1;Parent=gene-NIV78_RS17545;Dbxref=Genbank:WP_257757701.1;Name=WP_257757701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006767064.1;locus_tag=NIV78_RS17545;product=organic hydroperoxide resistance protein;protein_id=WP_257757701.1;transl_table=11 NZ_CP100137.1 RefSeq gene 87844 88884 . + . ID=gene-NIV78_RS17550;Name=NIV78_RS17550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17550 NZ_CP100137.1 Protein Homology CDS 87844 88884 . + 0 ID=cds-WP_012732943.1;Parent=gene-NIV78_RS17550;Dbxref=Genbank:WP_012732943.1;Name=WP_012732943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732943.1;locus_tag=NIV78_RS17550;product=alpha/beta hydrolase;protein_id=WP_012732943.1;transl_table=11 NZ_CP100137.1 RefSeq gene 89405 90025 . - . ID=gene-NIV78_RS17555;Name=NIV78_RS17555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17555 NZ_CP100137.1 Protein Homology CDS 89405 90025 . - 0 ID=cds-WP_012732944.1;Parent=gene-NIV78_RS17555;Dbxref=Genbank:WP_012732944.1;Name=WP_012732944.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732944.1;locus_tag=NIV78_RS17555;product=LysE family transporter;protein_id=WP_012732944.1;transl_table=11 NZ_CP100137.1 RefSeq gene 90132 91022 . + . ID=gene-NIV78_RS17560;Name=NIV78_RS17560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17560 NZ_CP100137.1 Protein Homology CDS 90132 91022 . + 0 ID=cds-WP_012732945.1;Parent=gene-NIV78_RS17560;Dbxref=Genbank:WP_012732945.1;Name=WP_012732945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006028391.1;locus_tag=NIV78_RS17560;product=LysR family transcriptional regulator ArgP;protein_id=WP_012732945.1;transl_table=11 NZ_CP100137.1 RefSeq gene 91185 91934 . - . ID=gene-NIV78_RS17565;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=NIV78_RS17565 NZ_CP100137.1 Protein Homology CDS 91185 91934 . - 0 ID=cds-WP_012732946.1;Parent=gene-NIV78_RS17565;Dbxref=Genbank:WP_012732946.1;Name=WP_012732946.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=fnr;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009894572.1;locus_tag=NIV78_RS17565;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_012732946.1;transl_table=11 NZ_CP100137.1 RefSeq gene 92076 92540 . - . ID=gene-NIV78_RS17570;Name=NIV78_RS17570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17570 NZ_CP100137.1 Protein Homology CDS 92076 92540 . - 0 ID=cds-WP_012732947.1;Parent=gene-NIV78_RS17570;Dbxref=Genbank:WP_012732947.1;Name=WP_012732947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424524.1;locus_tag=NIV78_RS17570;product=universal stress protein;protein_id=WP_012732947.1;transl_table=11 NZ_CP100137.1 RefSeq gene 92991 93227 . + . ID=gene-NIV78_RS17575;Name=NIV78_RS17575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17575 NZ_CP100137.1 Protein Homology CDS 92991 93227 . + 0 ID=cds-WP_012732948.1;Parent=gene-NIV78_RS17575;Dbxref=Genbank:WP_012732948.1;Name=WP_012732948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009894577.1;locus_tag=NIV78_RS17575;product=hypothetical protein;protein_id=WP_012732948.1;transl_table=11 NZ_CP100137.1 RefSeq gene 93347 94279 . + . ID=gene-NIV78_RS17580;Name=NIV78_RS17580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17580 NZ_CP100137.1 Protein Homology CDS 93347 94279 . + 0 ID=cds-WP_012732949.1;Parent=gene-NIV78_RS17580;Dbxref=Genbank:WP_012732949.1;Name=WP_012732949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732949.1;locus_tag=NIV78_RS17580;product=serine O-acetyltransferase;protein_id=WP_012732949.1;transl_table=11 NZ_CP100137.1 RefSeq gene 94563 95378 . - . ID=gene-NIV78_RS17585;Name=NIV78_RS17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17585 NZ_CP100137.1 Protein Homology CDS 94563 95378 . - 0 ID=cds-WP_100556249.1;Parent=gene-NIV78_RS17585;Dbxref=Genbank:WP_100556249.1;Name=WP_100556249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732950.1;locus_tag=NIV78_RS17585;product=SDR family oxidoreductase;protein_id=WP_100556249.1;transl_table=11 NZ_CP100137.1 RefSeq gene 95378 96037 . - . ID=gene-NIV78_RS17590;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=NIV78_RS17590 NZ_CP100137.1 Protein Homology CDS 95378 96037 . - 0 ID=cds-WP_012732951.1;Parent=gene-NIV78_RS17590;Dbxref=Genbank:WP_012732951.1;Name=WP_012732951.1;Ontology_term=GO:0042559,GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=pteridine-containing compound biosynthetic process|0042559||IEA,tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732951.1;locus_tag=NIV78_RS17590;product=GTP cyclohydrolase I FolE;protein_id=WP_012732951.1;transl_table=11 NZ_CP100137.1 RefSeq gene 96174 97109 . - . ID=gene-NIV78_RS17595;Name=NIV78_RS17595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17595 NZ_CP100137.1 Protein Homology CDS 96174 97109 . - 0 ID=cds-WP_100556248.1;Parent=gene-NIV78_RS17595;Dbxref=Genbank:WP_100556248.1;Name=WP_100556248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532449.1;locus_tag=NIV78_RS17595;product=LysR family transcriptional regulator;protein_id=WP_100556248.1;transl_table=11 NZ_CP100137.1 RefSeq gene 97237 98484 . + . ID=gene-NIV78_RS17600;Name=NIV78_RS17600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17600 NZ_CP100137.1 Protein Homology CDS 97237 98484 . + 0 ID=cds-WP_012732953.1;Parent=gene-NIV78_RS17600;Dbxref=Genbank:WP_012732953.1;Name=WP_012732953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732953.1;locus_tag=NIV78_RS17600;product=4-hydroxybenzoate 3-monooxygenase;protein_id=WP_012732953.1;transl_table=11 NZ_CP100137.1 RefSeq gene 98628 99329 . + . ID=gene-NIV78_RS17605;Name=NIV78_RS17605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17605 NZ_CP100137.1 Protein Homology CDS 98628 99329 . + 0 ID=cds-WP_012732954.1;Parent=gene-NIV78_RS17605;Dbxref=Genbank:WP_012732954.1;Name=WP_012732954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013688935.1;locus_tag=NIV78_RS17605;product=3-oxoacid CoA-transferase subunit A;protein_id=WP_012732954.1;transl_table=11 NZ_CP100137.1 RefSeq gene 99346 100002 . + . ID=gene-NIV78_RS17610;Name=NIV78_RS17610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17610 NZ_CP100137.1 Protein Homology CDS 99346 100002 . + 0 ID=cds-WP_012732955.1;Parent=gene-NIV78_RS17610;Dbxref=Genbank:WP_012732955.1;Name=WP_012732955.1;Ontology_term=GO:0008410;gbkey=CDS;go_function=CoA-transferase activity|0008410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194517.1;locus_tag=NIV78_RS17610;product=3-oxoacid CoA-transferase subunit B;protein_id=WP_012732955.1;transl_table=11 NZ_CP100137.1 RefSeq gene 100192 101550 . + . ID=gene-NIV78_RS17615;Name=NIV78_RS17615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17615 NZ_CP100137.1 Protein Homology CDS 100192 101550 . + 0 ID=cds-WP_251107696.1;Parent=gene-NIV78_RS17615;Dbxref=Genbank:WP_251107696.1;Name=WP_251107696.1;Ontology_term=GO:0019619,GO:0047472;gbkey=CDS;go_function=3-carboxy-cis%2Ccis-muconate cycloisomerase activity|0047472||IEA;go_process=3%2C4-dihydroxybenzoate catabolic process|0019619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732956.1;locus_tag=NIV78_RS17615;product=3-carboxy-cis%2Ccis-muconate cycloisomerase;protein_id=WP_251107696.1;transl_table=11 NZ_CP100137.1 RefSeq gene 101568 102353 . + . ID=gene-NIV78_RS17620;Name=pcaD;gbkey=Gene;gene=pcaD;gene_biotype=protein_coding;locus_tag=NIV78_RS17620 NZ_CP100137.1 Protein Homology CDS 101568 102353 . + 0 ID=cds-WP_017423996.1;Parent=gene-NIV78_RS17620;Dbxref=Genbank:WP_017423996.1;Name=WP_017423996.1;Ontology_term=GO:0042952,GO:0047570;gbkey=CDS;gene=pcaD;go_function=3-oxoadipate enol-lactonase activity|0047570||IEA;go_process=beta-ketoadipate pathway|0042952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010117629.1;locus_tag=NIV78_RS17620;product=3-oxoadipate enol-lactonase;protein_id=WP_017423996.1;transl_table=11 NZ_CP100137.1 RefSeq gene 102368 102760 . + . ID=gene-NIV78_RS17625;Name=pcaC;gbkey=Gene;gene=pcaC;gene_biotype=protein_coding;locus_tag=NIV78_RS17625 NZ_CP100137.1 Protein Homology CDS 102368 102760 . + 0 ID=cds-WP_012732958.1;Parent=gene-NIV78_RS17625;Dbxref=Genbank:WP_012732958.1;Name=WP_012732958.1;Ontology_term=GO:0047575;gbkey=CDS;gene=pcaC;go_function=4-carboxymuconolactone decarboxylase activity|0047575||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732958.1;locus_tag=NIV78_RS17625;product=4-carboxymuconolactone decarboxylase;protein_id=WP_012732958.1;transl_table=11 NZ_CP100137.1 RefSeq gene 102878 103126 . - . ID=gene-NIV78_RS17630;Name=NIV78_RS17630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17630 NZ_CP100137.1 Protein Homology CDS 102878 103126 . - 0 ID=cds-WP_012732959.1;Parent=gene-NIV78_RS17630;Dbxref=Genbank:WP_012732959.1;Name=WP_012732959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196558.1;locus_tag=NIV78_RS17630;product=hypothetical protein;protein_id=WP_012732959.1;transl_table=11 NZ_CP100137.1 RefSeq gene 103296 103910 . - . ID=gene-NIV78_RS17635;Name=NIV78_RS17635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17635 NZ_CP100137.1 Protein Homology CDS 103296 103910 . - 0 ID=cds-WP_017423997.1;Parent=gene-NIV78_RS17635;Dbxref=Genbank:WP_017423997.1;Name=WP_017423997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423997.1;locus_tag=NIV78_RS17635;product=LysE family translocator;protein_id=WP_017423997.1;transl_table=11 NZ_CP100137.1 RefSeq gene 104458 106038 . + . ID=gene-NIV78_RS17640;Name=NIV78_RS17640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17640 NZ_CP100137.1 Protein Homology CDS 104458 106038 . + 0 ID=cds-WP_100556246.1;Parent=gene-NIV78_RS17640;Dbxref=Genbank:WP_100556246.1;Name=WP_100556246.1;Ontology_term=GO:0003824,GO:0030976;gbkey=CDS;go_function=catalytic activity|0003824||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732961.1;locus_tag=NIV78_RS17640;product=acetolactate synthase large subunit;protein_id=WP_100556246.1;transl_table=11 NZ_CP100137.1 RefSeq gene 106088 106900 . + . ID=gene-NIV78_RS17645;Name=NIV78_RS17645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17645 NZ_CP100137.1 Protein Homology CDS 106088 106900 . + 0 ID=cds-WP_017922854.1;Parent=gene-NIV78_RS17645;Dbxref=Genbank:WP_017922854.1;Name=WP_017922854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017775041.1;locus_tag=NIV78_RS17645;product=SDR family oxidoreductase;protein_id=WP_017922854.1;transl_table=11 NZ_CP100137.1 RefSeq gene 106916 107953 . + . ID=gene-NIV78_RS17650;Name=NIV78_RS17650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17650 NZ_CP100137.1 Protein Homology CDS 106916 107953 . + 0 ID=cds-WP_012732963.1;Parent=gene-NIV78_RS17650;Dbxref=Genbank:WP_012732963.1;Name=WP_012732963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732963.1;locus_tag=NIV78_RS17650;product=exo-alpha-sialidase;protein_id=WP_012732963.1;transl_table=11 NZ_CP100137.1 RefSeq gene 107966 108481 . + . ID=gene-NIV78_RS17655;Name=NIV78_RS17655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17655 NZ_CP100137.1 Protein Homology CDS 107966 108481 . + 0 ID=cds-WP_012732964.1;Parent=gene-NIV78_RS17655;Dbxref=Genbank:WP_012732964.1;Name=WP_012732964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732964.1;locus_tag=NIV78_RS17655;product=VOC family protein;protein_id=WP_012732964.1;transl_table=11 NZ_CP100137.1 RefSeq gene 108530 109135 . + . ID=gene-NIV78_RS17660;Name=NIV78_RS17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17660 NZ_CP100137.1 Protein Homology CDS 108530 109135 . + 0 ID=cds-WP_012732965.1;Parent=gene-NIV78_RS17660;Dbxref=Genbank:WP_012732965.1;Name=WP_012732965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697510.1;locus_tag=NIV78_RS17660;product=amino acid synthesis family protein;protein_id=WP_012732965.1;transl_table=11 NZ_CP100137.1 RefSeq gene 109163 110050 . + . ID=gene-NIV78_RS17665;Name=NIV78_RS17665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17665 NZ_CP100137.1 Protein Homology CDS 109163 110050 . + 0 ID=cds-WP_232252202.1;Parent=gene-NIV78_RS17665;Dbxref=Genbank:WP_232252202.1;Name=WP_232252202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549882.1;locus_tag=NIV78_RS17665;product=alpha/beta hydrolase;protein_id=WP_232252202.1;transl_table=11 NZ_CP100137.1 RefSeq gene 110047 111675 . + . ID=gene-NIV78_RS17670;Name=NIV78_RS17670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17670 NZ_CP100137.1 Protein Homology CDS 110047 111675 . + 0 ID=cds-WP_017922853.1;Parent=gene-NIV78_RS17670;Dbxref=Genbank:WP_017922853.1;Name=WP_017922853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549881.1;locus_tag=NIV78_RS17670;product=bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;protein_id=WP_017922853.1;transl_table=11 NZ_CP100137.1 RefSeq gene 111665 111997 . + . ID=gene-NIV78_RS17675;Name=NIV78_RS17675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17675 NZ_CP100137.1 Protein Homology CDS 111665 111997 . + 0 ID=cds-WP_017922852.1;Parent=gene-NIV78_RS17675;Dbxref=Genbank:WP_017922852.1;Name=WP_017922852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732968.1;locus_tag=NIV78_RS17675;product=NIPSNAP family protein;protein_id=WP_017922852.1;transl_table=11 NZ_CP100137.1 RefSeq gene 112046 113527 . + . ID=gene-NIV78_RS17680;Name=NIV78_RS17680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17680 NZ_CP100137.1 Protein Homology CDS 112046 113527 . + 0 ID=cds-WP_017922851.1;Parent=gene-NIV78_RS17680;Dbxref=Genbank:WP_017922851.1;Name=WP_017922851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732969.1;locus_tag=NIV78_RS17680;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_017922851.1;transl_table=11 NZ_CP100137.1 RefSeq gene 113582 114310 . - . ID=gene-NIV78_RS17685;Name=NIV78_RS17685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17685 NZ_CP100137.1 Protein Homology CDS 113582 114310 . - 0 ID=cds-WP_012732970.1;Parent=gene-NIV78_RS17685;Dbxref=Genbank:WP_012732970.1;Name=WP_012732970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732970.1;locus_tag=NIV78_RS17685;product=IclR family transcriptional regulator;protein_id=WP_012732970.1;transl_table=11 NZ_CP100137.1 RefSeq gene 115073 115636 . - . ID=gene-NIV78_RS17690;Name=NIV78_RS17690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17690 NZ_CP100137.1 Protein Homology CDS 115073 115636 . - 0 ID=cds-WP_012732971.1;Parent=gene-NIV78_RS17690;Dbxref=Genbank:WP_012732971.1;Name=WP_012732971.1;Ontology_term=GO:0009055,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732971.1;locus_tag=NIV78_RS17690;product=cytochrome b/b6 domain-containing protein;protein_id=WP_012732971.1;transl_table=11 NZ_CP100137.1 RefSeq gene 115788 117152 . - . ID=gene-NIV78_RS17695;Name=NIV78_RS17695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17695 NZ_CP100137.1 Protein Homology CDS 115788 117152 . - 0 ID=cds-WP_012732972.1;Parent=gene-NIV78_RS17695;Dbxref=Genbank:WP_012732972.1;Name=WP_012732972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549874.1;locus_tag=NIV78_RS17695;product=aspartate aminotransferase family protein;protein_id=WP_012732972.1;transl_table=11 NZ_CP100137.1 RefSeq gene 117210 118655 . - . ID=gene-NIV78_RS17700;Name=NIV78_RS17700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17700 NZ_CP100137.1 Protein Homology CDS 117210 118655 . - 0 ID=cds-WP_012732973.1;Parent=gene-NIV78_RS17700;Dbxref=Genbank:WP_012732973.1;Name=WP_012732973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725554.1;locus_tag=NIV78_RS17700;product=aldehyde dehydrogenase family protein;protein_id=WP_012732973.1;transl_table=11 NZ_CP100137.1 RefSeq gene 118917 120359 . - . ID=gene-NIV78_RS17705;Name=NIV78_RS17705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17705 NZ_CP100137.1 Protein Homology CDS 118917 120359 . - 0 ID=cds-WP_017923175.1;Parent=gene-NIV78_RS17705;Dbxref=Genbank:WP_017923175.1;Name=WP_017923175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549872.1;locus_tag=NIV78_RS17705;product=APC family permease;protein_id=WP_017923175.1;transl_table=11 NZ_CP100137.1 RefSeq gene 120648 121592 . - . ID=gene-NIV78_RS17710;Name=NIV78_RS17710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17710 NZ_CP100137.1 Protein Homology CDS 120648 121592 . - 0 ID=cds-WP_017923174.1;Parent=gene-NIV78_RS17710;Dbxref=Genbank:WP_017923174.1;Name=WP_017923174.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423707.1;locus_tag=NIV78_RS17710;product=helix-turn-helix domain-containing protein;protein_id=WP_017923174.1;transl_table=11 NZ_CP100137.1 RefSeq gene 122224 123663 . - . ID=gene-NIV78_RS17715;Name=NIV78_RS17715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17715 NZ_CP100137.1 Protein Homology CDS 122224 123663 . - 0 ID=cds-WP_251107693.1;Parent=gene-NIV78_RS17715;Dbxref=Genbank:WP_251107693.1;Name=WP_251107693.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF012398.2;locus_tag=NIV78_RS17715;product=aldehyde dehydrogenase family protein;protein_id=WP_251107693.1;transl_table=11 NZ_CP100137.1 RefSeq gene 123925 124842 . + . ID=gene-NIV78_RS17720;Name=feaR;gbkey=Gene;gene=feaR;gene_biotype=protein_coding;locus_tag=NIV78_RS17720 NZ_CP100137.1 Protein Homology CDS 123925 124842 . + 0 ID=cds-WP_017923172.1;Parent=gene-NIV78_RS17720;Dbxref=Genbank:WP_017923172.1;Name=WP_017923172.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=feaR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF007243.0;locus_tag=NIV78_RS17720;product=transcriptional regulator FeaR;protein_id=WP_017923172.1;transl_table=11 NZ_CP100137.1 RefSeq gene 124858 125376 . - . ID=gene-NIV78_RS17725;Name=hpaC;gbkey=Gene;gene=hpaC;gene_biotype=protein_coding;locus_tag=NIV78_RS17725 NZ_CP100137.1 Protein Homology CDS 124858 125376 . - 0 ID=cds-WP_017923171.1;Parent=gene-NIV78_RS17725;Dbxref=Genbank:WP_017923171.1;Name=WP_017923171.1;gbkey=CDS;gene=hpaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732978.1;locus_tag=NIV78_RS17725;product=4-hydroxyphenylacetate 3-monooxygenase%2C reductase component;protein_id=WP_017923171.1;transl_table=11 NZ_CP100137.1 RefSeq gene 125700 126347 . + . ID=gene-NIV78_RS17730;Name=NIV78_RS17730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17730 NZ_CP100137.1 Protein Homology CDS 125700 126347 . + 0 ID=cds-WP_012732979.1;Parent=gene-NIV78_RS17730;Dbxref=Genbank:WP_012732979.1;Name=WP_012732979.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732979.1;locus_tag=NIV78_RS17730;product=response regulator;protein_id=WP_012732979.1;transl_table=11 NZ_CP100137.1 RefSeq gene 126459 127202 . - . ID=gene-NIV78_RS17735;Name=NIV78_RS17735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17735 NZ_CP100137.1 Protein Homology CDS 126459 127202 . - 0 ID=cds-WP_017923170.1;Parent=gene-NIV78_RS17735;Dbxref=Genbank:WP_017923170.1;Name=WP_017923170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660265.1;locus_tag=NIV78_RS17735;product=SDR family oxidoreductase;protein_id=WP_017923170.1;transl_table=11 NZ_CP100137.1 RefSeq gene 127259 127633 . - . ID=gene-NIV78_RS17740;Name=NIV78_RS17740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17740 NZ_CP100137.1 Protein Homology CDS 127259 127633 . - 0 ID=cds-WP_012732981.1;Parent=gene-NIV78_RS17740;Dbxref=Genbank:WP_012732981.1;Name=WP_012732981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732981.1;locus_tag=NIV78_RS17740;product=hypothetical protein;protein_id=WP_012732981.1;transl_table=11 NZ_CP100137.1 RefSeq gene 127719 128915 . - . ID=gene-NIV78_RS17745;Name=NIV78_RS17745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17745 NZ_CP100137.1 Protein Homology CDS 127719 128915 . - 0 ID=cds-WP_017923399.1;Parent=gene-NIV78_RS17745;Dbxref=Genbank:WP_017923399.1;Name=WP_017923399.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732982.1;locus_tag=NIV78_RS17745;product=acyl-CoA dehydrogenase family protein;protein_id=WP_017923399.1;transl_table=11 NZ_CP100137.1 RefSeq gene 129170 130648 . + . ID=gene-NIV78_RS17750;Name=NIV78_RS17750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17750 NZ_CP100137.1 Protein Homology CDS 129170 130648 . + 0 ID=cds-WP_017923400.1;Parent=gene-NIV78_RS17750;Dbxref=Genbank:WP_017923400.1;Name=WP_017923400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732983.1;locus_tag=NIV78_RS17750;product=ATP-binding protein;protein_id=WP_017923400.1;transl_table=11 NZ_CP100137.1 RefSeq gene 130698 131909 . - . ID=gene-NIV78_RS17755;Name=NIV78_RS17755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17755 NZ_CP100137.1 Protein Homology CDS 130698 131909 . - 0 ID=cds-WP_017923401.1;Parent=gene-NIV78_RS17755;Dbxref=Genbank:WP_017923401.1;Name=WP_017923401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732984.1;locus_tag=NIV78_RS17755;product=porin;protein_id=WP_017923401.1;transl_table=11 NZ_CP100137.1 RefSeq gene 132034 133479 . - . ID=gene-NIV78_RS17760;Name=NIV78_RS17760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17760 NZ_CP100137.1 Protein Homology CDS 132034 133479 . - 0 ID=cds-WP_012732985.1;Parent=gene-NIV78_RS17760;Dbxref=Genbank:WP_012732985.1;Name=WP_012732985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732985.1;locus_tag=NIV78_RS17760;product=APC family permease;protein_id=WP_012732985.1;transl_table=11 NZ_CP100137.1 RefSeq gene 133746 134879 . - . ID=gene-NIV78_RS17765;Name=NIV78_RS17765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17765 NZ_CP100137.1 Protein Homology CDS 133746 134879 . - 0 ID=cds-WP_251107692.1;Parent=gene-NIV78_RS17765;Dbxref=Genbank:WP_251107692.1;Name=WP_251107692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490494.1;locus_tag=NIV78_RS17765;product=amidase family protein;protein_id=WP_251107692.1;transl_table=11 NZ_CP100137.1 RefSeq gene 134876 135433 . - . ID=gene-NIV78_RS17770;Name=NIV78_RS17770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17770 NZ_CP100137.1 Protein Homology CDS 134876 135433 . - 0 ID=cds-WP_251107691.1;Parent=gene-NIV78_RS17770;Dbxref=Genbank:WP_251107691.1;Name=WP_251107691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732987.1;locus_tag=NIV78_RS17770;product=nuclear transport factor 2 family protein;protein_id=WP_251107691.1;transl_table=11 NZ_CP100137.1 RefSeq gene 135495 135881 . - . ID=gene-NIV78_RS17775;Name=NIV78_RS17775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17775 NZ_CP100137.1 Protein Homology CDS 135495 135881 . - 0 ID=cds-WP_017425477.1;Parent=gene-NIV78_RS17775;Dbxref=Genbank:WP_017425477.1;Name=WP_017425477.1;Ontology_term=GO:0006725,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=cellular aromatic compound metabolic process|0006725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694648.1;locus_tag=NIV78_RS17775;product=tautomerase family protein;protein_id=WP_017425477.1;transl_table=11 NZ_CP100137.1 RefSeq gene 135944 136444 . - . ID=gene-NIV78_RS17780;Name=NIV78_RS17780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17780 NZ_CP100137.1 Protein Homology CDS 135944 136444 . - 0 ID=cds-WP_017425476.1;Parent=gene-NIV78_RS17780;Dbxref=Genbank:WP_017425476.1;Name=WP_017425476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425476.1;locus_tag=NIV78_RS17780;product=aromatic-ring-hydroxylating dioxygenase subunit beta;protein_id=WP_017425476.1;transl_table=11 NZ_CP100137.1 RefSeq gene 136441 137718 . - . ID=gene-NIV78_RS17785;Name=NIV78_RS17785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17785 NZ_CP100137.1 Protein Homology CDS 136441 137718 . - 0 ID=cds-WP_017425475.1;Parent=gene-NIV78_RS17785;Dbxref=Genbank:WP_017425475.1;Name=WP_017425475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425475.1;locus_tag=NIV78_RS17785;product=aromatic ring-hydroxylating dioxygenase subunit alpha;protein_id=WP_017425475.1;transl_table=11 NZ_CP100137.1 RefSeq gene 137865 138860 . + . ID=gene-NIV78_RS17790;Name=NIV78_RS17790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17790 NZ_CP100137.1 Protein Homology CDS 137865 138860 . + 0 ID=cds-WP_043195190.1;Parent=gene-NIV78_RS17790;Dbxref=Genbank:WP_043195190.1;Name=WP_043195190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732991.1;locus_tag=NIV78_RS17790;product=LysR family transcriptional regulator;protein_id=WP_043195190.1;transl_table=11 NZ_CP100137.1 RefSeq gene 138805 139773 . - . ID=gene-NIV78_RS17795;Name=NIV78_RS17795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17795 NZ_CP100137.1 Protein Homology CDS 138805 139773 . - 0 ID=cds-WP_017425473.1;Parent=gene-NIV78_RS17795;Dbxref=Genbank:WP_017425473.1;Name=WP_017425473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425473.1;locus_tag=NIV78_RS17795;product=PDR/VanB family oxidoreductase;protein_id=WP_017425473.1;transl_table=11 NZ_CP100137.1 RefSeq gene 140251 141390 . + . ID=gene-NIV78_RS17800;Name=NIV78_RS17800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17800 NZ_CP100137.1 Protein Homology CDS 140251 141390 . + 0 ID=cds-WP_017923017.1;Parent=gene-NIV78_RS17800;Dbxref=Genbank:WP_017923017.1;Name=WP_017923017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697535.1;locus_tag=NIV78_RS17800;product=tyramine oxidase subunit B;protein_id=WP_017923017.1;transl_table=11 NZ_CP100137.1 RefSeq gene 141464 141886 . + . ID=gene-NIV78_RS17805;Name=NIV78_RS17805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17805 NZ_CP100137.1 Protein Homology CDS 141464 141886 . + 0 ID=cds-WP_012732994.1;Parent=gene-NIV78_RS17805;Dbxref=Genbank:WP_012732994.1;Name=WP_012732994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424464.1;locus_tag=NIV78_RS17805;product=Rid family hydrolase;protein_id=WP_012732994.1;transl_table=11 NZ_CP100137.1 RefSeq gene 141954 143249 . + . ID=gene-NIV78_RS17810;Name=NIV78_RS17810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17810 NZ_CP100137.1 Protein Homology CDS 141954 143249 . + 0 ID=cds-WP_017923016.1;Parent=gene-NIV78_RS17810;Dbxref=Genbank:WP_017923016.1;Name=WP_017923016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424465.1;locus_tag=NIV78_RS17810;product=FAD-binding oxidoreductase;protein_id=WP_017923016.1;transl_table=11 NZ_CP100137.1 RefSeq gene 143423 144448 . + . ID=gene-NIV78_RS17815;Name=NIV78_RS17815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17815 NZ_CP100137.1 Protein Homology CDS 143423 144448 . + 0 ID=cds-WP_012732996.1;Parent=gene-NIV78_RS17815;Dbxref=Genbank:WP_012732996.1;Name=WP_012732996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732996.1;locus_tag=NIV78_RS17815;product=AraC family transcriptional regulator;protein_id=WP_012732996.1;transl_table=11 NZ_CP100137.1 RefSeq gene 144670 146295 . - . ID=gene-NIV78_RS17820;Name=NIV78_RS17820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17820 NZ_CP100137.1 Protein Homology CDS 144670 146295 . - 0 ID=cds-WP_012732997.1;Parent=gene-NIV78_RS17820;Dbxref=Genbank:WP_012732997.1;Name=WP_012732997.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732997.1;locus_tag=NIV78_RS17820;product=methyl-accepting chemotaxis protein;protein_id=WP_012732997.1;transl_table=11 NZ_CP100137.1 RefSeq gene 146778 148340 . - . ID=gene-NIV78_RS17825;Name=NIV78_RS17825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17825 NZ_CP100137.1 Protein Homology CDS 146778 148340 . - 0 ID=cds-WP_153478585.1;Parent=gene-NIV78_RS17825;Dbxref=Genbank:WP_153478585.1;Name=WP_153478585.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014972859.1;locus_tag=NIV78_RS17825;product=methyl-accepting chemotaxis protein;protein_id=WP_153478585.1;transl_table=11 NZ_CP100137.1 RefSeq gene 148688 149008 . + . ID=gene-NIV78_RS17830;Name=NIV78_RS17830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17830 NZ_CP100137.1 GeneMarkS-2+ CDS 148688 149008 . + 0 ID=cds-WP_085967307.1;Parent=gene-NIV78_RS17830;Dbxref=Genbank:WP_085967307.1;Name=WP_085967307.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS17830;product=hypothetical protein;protein_id=WP_085967307.1;transl_table=11 NZ_CP100137.1 RefSeq gene 149354 151912 . - . ID=gene-NIV78_RS17835;Name=NIV78_RS17835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17835 NZ_CP100137.1 Protein Homology CDS 149354 151912 . - 0 ID=cds-WP_080630212.1;Parent=gene-NIV78_RS17835;Dbxref=Genbank:WP_080630212.1;Name=WP_080630212.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016101.2;locus_tag=NIV78_RS17835;product=hypothetical protein;protein_id=WP_080630212.1;transl_table=11 NZ_CP100137.1 RefSeq gene 152540 153676 . - . ID=gene-NIV78_RS17840;Name=NIV78_RS17840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17840 NZ_CP100137.1 Protein Homology CDS 152540 153676 . - 0 ID=cds-WP_171466924.1;Parent=gene-NIV78_RS17840;Dbxref=Genbank:WP_171466924.1;Name=WP_171466924.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF025878.2;locus_tag=NIV78_RS17840;product=helix-turn-helix domain-containing protein;protein_id=WP_171466924.1;transl_table=11 NZ_CP100137.1 RefSeq gene 154324 155967 . + . ID=gene-NIV78_RS17845;Name=NIV78_RS17845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17845 NZ_CP100137.1 Protein Homology CDS 154324 155967 . + 0 ID=cds-WP_169511340.1;Parent=gene-NIV78_RS17845;Dbxref=Genbank:WP_169511340.1;Name=WP_169511340.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733080.1;locus_tag=NIV78_RS17845;product=methyl-accepting chemotaxis protein;protein_id=WP_169511340.1;transl_table=11 NZ_CP100137.1 RefSeq gene 156284 157234 . - . ID=gene-NIV78_RS17850;Name=NIV78_RS17850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17850 NZ_CP100137.1 Protein Homology CDS 156284 157234 . - 0 ID=cds-WP_012733002.1;Parent=gene-NIV78_RS17850;Dbxref=Genbank:WP_012733002.1;Name=WP_012733002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423248.1;locus_tag=NIV78_RS17850;product=LysR substrate-binding domain-containing protein;protein_id=WP_012733002.1;transl_table=11 NZ_CP100137.1 RefSeq gene 157332 158924 . + . ID=gene-NIV78_RS17855;Name=NIV78_RS17855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17855 NZ_CP100137.1 Protein Homology CDS 157332 158924 . + 0 ID=cds-WP_017922622.1;Parent=gene-NIV78_RS17855;Dbxref=Genbank:WP_017922622.1;Name=WP_017922622.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733003.1;locus_tag=NIV78_RS17855;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_017922622.1;transl_table=11 NZ_CP100137.1 RefSeq gene 158946 161624 . + . ID=gene-NIV78_RS17860;Name=NIV78_RS17860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17860 NZ_CP100137.1 Protein Homology CDS 158946 161624 . + 0 ID=cds-WP_012733004.1;Parent=gene-NIV78_RS17860;Dbxref=Genbank:WP_012733004.1;Name=WP_012733004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423250.1;locus_tag=NIV78_RS17860;product=DUF2309 domain-containing protein;protein_id=WP_012733004.1;transl_table=11 NZ_CP100137.1 RefSeq gene 162058 162867 . - . ID=gene-NIV78_RS17865;Name=NIV78_RS17865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17865 NZ_CP100137.1 Protein Homology CDS 162058 162867 . - 0 ID=cds-WP_012733005.1;Parent=gene-NIV78_RS17865;Dbxref=Genbank:WP_012733005.1;Name=WP_012733005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733005.1;locus_tag=NIV78_RS17865;product=alpha/beta hydrolase;protein_id=WP_012733005.1;transl_table=11 NZ_CP100137.1 RefSeq gene 162975 163514 . + . ID=gene-NIV78_RS17870;Name=NIV78_RS17870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17870 NZ_CP100137.1 Protein Homology CDS 162975 163514 . + 0 ID=cds-WP_017423251.1;Parent=gene-NIV78_RS17870;Dbxref=Genbank:WP_017423251.1;Name=WP_017423251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733006.1;locus_tag=NIV78_RS17870;product=MarR family transcriptional regulator;protein_id=WP_017423251.1;transl_table=11 NZ_CP100137.1 RefSeq gene 163607 164563 . + . ID=gene-NIV78_RS17875;Name=NIV78_RS17875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17875 NZ_CP100137.1 Protein Homology CDS 163607 164563 . + 0 ID=cds-WP_017423252.1;Parent=gene-NIV78_RS17875;Dbxref=Genbank:WP_017423252.1;Name=WP_017423252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423252.1;locus_tag=NIV78_RS17875;product=LysR family transcriptional regulator;protein_id=WP_017423252.1;transl_table=11 NZ_CP100137.1 RefSeq gene 164774 165700 . + . ID=gene-NIV78_RS17880;Name=NIV78_RS17880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17880 NZ_CP100137.1 Protein Homology CDS 164774 165700 . + 0 ID=cds-WP_255016861.1;Parent=gene-NIV78_RS17880;Dbxref=Genbank:WP_255016861.1;Name=WP_255016861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733008.1;locus_tag=NIV78_RS17880;product=TauD/TfdA family dioxygenase;protein_id=WP_255016861.1;transl_table=11 NZ_CP100137.1 RefSeq gene 165697 167172 . + . ID=gene-NIV78_RS17885;Name=NIV78_RS17885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17885 NZ_CP100137.1 Protein Homology CDS 165697 167172 . + 0 ID=cds-WP_012733009.1;Parent=gene-NIV78_RS17885;Dbxref=Genbank:WP_012733009.1;Name=WP_012733009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882671.1;locus_tag=NIV78_RS17885;product=AMP-binding protein;protein_id=WP_012733009.1;transl_table=11 NZ_CP100137.1 RefSeq gene 167186 167812 . + . ID=gene-NIV78_RS17890;Name=NIV78_RS17890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17890 NZ_CP100137.1 Protein Homology CDS 167186 167812 . + 0 ID=cds-WP_012733010.1;Parent=gene-NIV78_RS17890;Dbxref=Genbank:WP_012733010.1;Name=WP_012733010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733010.1;locus_tag=NIV78_RS17890;product=thermostable hemolysin;protein_id=WP_012733010.1;transl_table=11 NZ_CP100137.1 RefSeq gene 167903 169060 . + . ID=gene-NIV78_RS17895;Name=NIV78_RS17895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17895 NZ_CP100137.1 Protein Homology CDS 167903 169060 . + 0 ID=cds-WP_232252199.1;Parent=gene-NIV78_RS17895;Dbxref=Genbank:WP_232252199.1;Name=WP_232252199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725449.1;locus_tag=NIV78_RS17895;product=Bcr/CflA family efflux MFS transporter;protein_id=WP_232252199.1;transl_table=11 NZ_CP100137.1 RefSeq gene 169057 169491 . + . ID=gene-NIV78_RS17900;Name=NIV78_RS17900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17900 NZ_CP100137.1 Protein Homology CDS 169057 169491 . + 0 ID=cds-WP_017423253.1;Parent=gene-NIV78_RS17900;Dbxref=Genbank:WP_017423253.1;Name=WP_017423253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423253.1;locus_tag=NIV78_RS17900;product=hypothetical protein;protein_id=WP_017423253.1;transl_table=11 NZ_CP100137.1 RefSeq gene 169652 170755 . + . ID=gene-NIV78_RS17905;Name=NIV78_RS17905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17905 NZ_CP100137.1 Protein Homology CDS 169652 170755 . + 0 ID=cds-WP_017423254.1;Parent=gene-NIV78_RS17905;Dbxref=Genbank:WP_017423254.1;Name=WP_017423254.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733013.1;locus_tag=NIV78_RS17905;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_017423254.1;transl_table=11 NZ_CP100137.1 RefSeq gene 170752 173838 . + . ID=gene-NIV78_RS17910;Name=NIV78_RS17910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17910 NZ_CP100137.1 Protein Homology CDS 170752 173838 . + 0 ID=cds-WP_017922621.1;Parent=gene-NIV78_RS17910;Dbxref=Genbank:WP_017922621.1;Name=WP_017922621.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882666.1;locus_tag=NIV78_RS17910;product=efflux RND transporter permease subunit;protein_id=WP_017922621.1;transl_table=11 NZ_CP100137.1 RefSeq gene 173835 175421 . + . ID=gene-NIV78_RS17915;Name=NIV78_RS17915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17915 NZ_CP100137.1 Protein Homology CDS 173835 175421 . + 0 ID=cds-WP_124837622.1;Parent=gene-NIV78_RS17915;Dbxref=Genbank:WP_124837622.1;Name=WP_124837622.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733015.1;locus_tag=NIV78_RS17915;product=efflux transporter outer membrane subunit;protein_id=WP_124837622.1;transl_table=11 NZ_CP100137.1 RefSeq gene 175661 176182 . + . ID=gene-NIV78_RS17920;Name=NIV78_RS17920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17920 NZ_CP100137.1 Protein Homology CDS 175661 176182 . + 0 ID=cds-WP_017922618.1;Parent=gene-NIV78_RS17920;Dbxref=Genbank:WP_017922618.1;Name=WP_017922618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733016.1;locus_tag=NIV78_RS17920;product=GNAT family N-acetyltransferase;protein_id=WP_017922618.1;transl_table=11 NZ_CP100137.1 RefSeq gene 176325 177053 . + . ID=gene-NIV78_RS17925;Name=NIV78_RS17925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17925 NZ_CP100137.1 Protein Homology CDS 176325 177053 . + 0 ID=cds-WP_257757711.1;Parent=gene-NIV78_RS17925;Dbxref=Genbank:WP_257757711.1;Name=WP_257757711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733017.1;locus_tag=NIV78_RS17925;product=class I SAM-dependent methyltransferase;protein_id=WP_257757711.1;transl_table=11 NZ_CP100137.1 RefSeq gene 177014 177831 . + . ID=gene-NIV78_RS17930;Name=NIV78_RS17930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17930 NZ_CP100137.1 Protein Homology CDS 177014 177362 . + 0 ID=cds-WP_085962451.1-3;Parent=gene-NIV78_RS17930;Dbxref=Genbank:WP_085962451.1;Name=WP_085962451.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS17930;product=IS5 family transposase;protein_id=WP_085962451.1;transl_table=11 NZ_CP100137.1 Protein Homology CDS 177362 177831 . + 2 ID=cds-WP_085962451.1-3;Parent=gene-NIV78_RS17930;Dbxref=Genbank:WP_085962451.1;Name=WP_085962451.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS17930;product=IS5 family transposase;protein_id=WP_085962451.1;transl_table=11 NZ_CP100137.1 RefSeq gene 178136 178894 . + . ID=gene-NIV78_RS17935;Name=NIV78_RS17935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17935 NZ_CP100137.1 Protein Homology CDS 178136 178894 . + 0 ID=cds-WP_017424793.1;Parent=gene-NIV78_RS17935;Dbxref=Genbank:WP_017424793.1;Name=WP_017424793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878109.1;locus_tag=NIV78_RS17935;product=DUF969 domain-containing protein;protein_id=WP_017424793.1;transl_table=11 NZ_CP100137.1 RefSeq gene 178891 179841 . + . ID=gene-NIV78_RS17940;Name=NIV78_RS17940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17940 NZ_CP100137.1 Protein Homology CDS 178891 179841 . + 0 ID=cds-WP_017424794.1;Parent=gene-NIV78_RS17940;Dbxref=Genbank:WP_017424794.1;Name=WP_017424794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424794.1;locus_tag=NIV78_RS17940;product=DUF979 domain-containing protein;protein_id=WP_017424794.1;transl_table=11 NZ_CP100137.1 RefSeq gene 180201 181589 . + . ID=gene-NIV78_RS17945;Name=antA;gbkey=Gene;gene=antA;gene_biotype=protein_coding;locus_tag=NIV78_RS17945 NZ_CP100137.1 Protein Homology CDS 180201 181589 . + 0 ID=cds-WP_015878107.1;Parent=gene-NIV78_RS17945;Dbxref=Genbank:WP_015878107.1;Name=WP_015878107.1;Ontology_term=GO:0006569,GO:0018618;gbkey=CDS;gene=antA;go_function=anthranilate 1%2C2-dioxygenase (deaminating%2C decarboxylating) activity|0018618||IEA;go_process=tryptophan catabolic process|0006569||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878107.1;locus_tag=NIV78_RS17945;product=anthranilate 1%2C2-dioxygenase large subunit;protein_id=WP_015878107.1;transl_table=11 NZ_CP100137.1 RefSeq gene 181593 182090 . + . ID=gene-NIV78_RS17950;Name=antB;gbkey=Gene;gene=antB;gene_biotype=protein_coding;locus_tag=NIV78_RS17950 NZ_CP100137.1 Protein Homology CDS 181593 182090 . + 0 ID=cds-WP_015878106.1;Parent=gene-NIV78_RS17950;Dbxref=Genbank:WP_015878106.1;Name=WP_015878106.1;Ontology_term=GO:0006569,GO:0018618;gbkey=CDS;gene=antB;go_function=anthranilate 1%2C2-dioxygenase (deaminating%2C decarboxylating) activity|0018618||IEA;go_process=tryptophan catabolic process|0006569||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878106.1;locus_tag=NIV78_RS17950;product=anthranilate 1%2C2-dioxygenase small subunit;protein_id=WP_015878106.1;transl_table=11 NZ_CP100137.1 RefSeq gene 182107 183147 . + . ID=gene-NIV78_RS17955;Name=antC;gbkey=Gene;gene=antC;gene_biotype=protein_coding;locus_tag=NIV78_RS17955 NZ_CP100137.1 Protein Homology CDS 182107 183147 . + 0 ID=cds-WP_017923807.1;Parent=gene-NIV78_RS17955;Dbxref=Genbank:WP_017923807.1;Name=WP_017923807.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=antC;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878105.1;locus_tag=NIV78_RS17955;product=anthranilate 1%2C2-dioxygenase electron transfer component AntC;protein_id=WP_017923807.1;transl_table=11 NZ_CP100137.1 RefSeq gene 183234 184238 . + . ID=gene-NIV78_RS17960;Name=NIV78_RS17960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17960 NZ_CP100137.1 Protein Homology CDS 183234 184238 . + 0 ID=cds-WP_015878104.1;Parent=gene-NIV78_RS17960;Dbxref=Genbank:WP_015878104.1;Name=WP_015878104.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878104.1;locus_tag=NIV78_RS17960;product=helix-turn-helix domain-containing protein;protein_id=WP_015878104.1;transl_table=11 NZ_CP100137.1 RefSeq gene 184842 185807 . + . ID=gene-NIV78_RS17965;Name=NIV78_RS17965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17965 NZ_CP100137.1 Protein Homology CDS 184842 185807 . + 0 ID=cds-WP_015878103.1;Parent=gene-NIV78_RS17965;Dbxref=Genbank:WP_015878103.1;Name=WP_015878103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878103.1;locus_tag=NIV78_RS17965;product=chemotaxis protein;protein_id=WP_015878103.1;transl_table=11 NZ_CP100137.1 RefSeq gene 186068 188719 . - . ID=gene-NIV78_RS17970;Name=NIV78_RS17970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17970 NZ_CP100137.1 Protein Homology CDS 186068 188719 . - 0 ID=cds-WP_100556454.1;Parent=gene-NIV78_RS17970;Dbxref=Genbank:WP_100556454.1;Name=WP_100556454.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976;gbkey=CDS;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878102.1;locus_tag=NIV78_RS17970;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_100556454.1;transl_table=11 NZ_CP100137.1 RefSeq gene 188943 190565 . - . ID=gene-NIV78_RS17975;Name=NIV78_RS17975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17975 NZ_CP100137.1 Protein Homology CDS 188943 190565 . - 0 ID=cds-WP_015878101.1;Parent=gene-NIV78_RS17975;Dbxref=Genbank:WP_015878101.1;Name=WP_015878101.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878101.1;locus_tag=NIV78_RS17975;product=methyl-accepting chemotaxis protein;protein_id=WP_015878101.1;transl_table=11 NZ_CP100137.1 RefSeq gene 191476 192282 . + . ID=gene-NIV78_RS17980;Name=NIV78_RS17980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17980 NZ_CP100137.1 Protein Homology CDS 191476 192282 . + 0 ID=cds-WP_017923045.1;Parent=gene-NIV78_RS17980;Dbxref=Genbank:WP_017923045.1;Name=WP_017923045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878100.1;locus_tag=NIV78_RS17980;product=EAL domain-containing protein;protein_id=WP_017923045.1;transl_table=11 NZ_CP100137.1 RefSeq gene 192769 193980 . + . ID=gene-NIV78_RS17985;Name=NIV78_RS17985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17985 NZ_CP100137.1 Protein Homology CDS 192769 193980 . + 0 ID=cds-WP_015878099.1;Parent=gene-NIV78_RS17985;Dbxref=Genbank:WP_015878099.1;Name=WP_015878099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425266.1;locus_tag=NIV78_RS17985;product=cytochrome P450;protein_id=WP_015878099.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 194128 194339 . + . ID=gene-NIV78_RS17990;Name=NIV78_RS17990;end_range=194339,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS17990;partial=true;pseudo=true;start_range=.,194128 NZ_CP100137.1 Protein Homology CDS 194128 194339 . + 0 ID=cds-NIV78_RS17990;Parent=gene-NIV78_RS17990;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=194339,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611267.1;locus_tag=NIV78_RS17990;partial=true;product=transposase;pseudo=true;start_range=.,194128;transl_table=11 NZ_CP100137.1 RefSeq gene 194941 197475 . + . ID=gene-NIV78_RS17995;Name=NIV78_RS17995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS17995 NZ_CP100137.1 Protein Homology CDS 194941 197475 . + 0 ID=cds-WP_017923046.1;Parent=gene-NIV78_RS17995;Dbxref=Genbank:WP_017923046.1;Name=WP_017923046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878098.1;locus_tag=NIV78_RS17995;product=type VI secretion system tip protein VgrG;protein_id=WP_017923046.1;transl_table=11 NZ_CP100137.1 RefSeq gene 197478 198470 . + . ID=gene-NIV78_RS18000;Name=NIV78_RS18000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18000 NZ_CP100137.1 Protein Homology CDS 197478 198470 . + 0 ID=cds-WP_241766829.1;Parent=gene-NIV78_RS18000;Dbxref=Genbank:WP_241766829.1;Name=WP_241766829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878097.1;locus_tag=NIV78_RS18000;product=DUF4123 domain-containing protein;protein_id=WP_241766829.1;transl_table=11 NZ_CP100137.1 RefSeq gene 198467 201292 . + . ID=gene-NIV78_RS18005;Name=NIV78_RS18005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18005 NZ_CP100137.1 Protein Homology CDS 198467 201292 . + 0 ID=cds-WP_017923048.1;Parent=gene-NIV78_RS18005;Dbxref=Genbank:WP_017923048.1;Name=WP_017923048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878096.1;locus_tag=NIV78_RS18005;product=hypothetical protein;protein_id=WP_017923048.1;transl_table=11 NZ_CP100137.1 RefSeq gene 201289 202029 . + . ID=gene-NIV78_RS18010;Name=NIV78_RS18010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18010 NZ_CP100137.1 Protein Homology CDS 201289 202029 . + 0 ID=cds-WP_159372714.1;Parent=gene-NIV78_RS18010;Dbxref=Genbank:WP_159372714.1;Name=WP_159372714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424829.1;locus_tag=NIV78_RS18010;product=hypothetical protein;protein_id=WP_159372714.1;transl_table=11 NZ_CP100137.1 RefSeq gene 202035 202775 . + . ID=gene-NIV78_RS18015;Name=NIV78_RS18015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18015 NZ_CP100137.1 Protein Homology CDS 202035 202775 . + 0 ID=cds-WP_100556587.1;Parent=gene-NIV78_RS18015;Dbxref=Genbank:WP_100556587.1;Name=WP_100556587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878095.1;locus_tag=NIV78_RS18015;product=hypothetical protein;protein_id=WP_100556587.1;transl_table=11 NZ_CP100137.1 RefSeq gene 202789 203049 . + . ID=gene-NIV78_RS18020;Name=NIV78_RS18020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18020 NZ_CP100137.1 Protein Homology CDS 202789 203049 . + 0 ID=cds-WP_017925071.1;Parent=gene-NIV78_RS18020;Dbxref=Genbank:WP_017925071.1;Name=WP_017925071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878094.1;locus_tag=NIV78_RS18020;product=PAAR domain-containing protein;protein_id=WP_017925071.1;transl_table=11 NZ_CP100137.1 RefSeq gene 203184 203414 . + . ID=gene-NIV78_RS18025;Name=NIV78_RS18025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18025 NZ_CP100137.1 GeneMarkS-2+ CDS 203184 203414 . + 0 ID=cds-WP_017424894.1;Parent=gene-NIV78_RS18025;Dbxref=Genbank:WP_017424894.1;Name=WP_017424894.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS18025;product=hypothetical protein;protein_id=WP_017424894.1;transl_table=11 NZ_CP100137.1 RefSeq gene 203411 204151 . + . ID=gene-NIV78_RS18030;Name=NIV78_RS18030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18030 NZ_CP100137.1 Protein Homology CDS 203411 204151 . + 0 ID=cds-WP_017424895.1;Parent=gene-NIV78_RS18030;Dbxref=Genbank:WP_017424895.1;Name=WP_017424895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878095.1;locus_tag=NIV78_RS18030;product=hypothetical protein;protein_id=WP_017424895.1;transl_table=11 NZ_CP100137.1 RefSeq gene 204157 204897 . + . ID=gene-NIV78_RS18035;Name=NIV78_RS18035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18035 NZ_CP100137.1 Protein Homology CDS 204157 204897 . + 0 ID=cds-WP_017424896.1;Parent=gene-NIV78_RS18035;Dbxref=Genbank:WP_017424896.1;Name=WP_017424896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017776245.1;locus_tag=NIV78_RS18035;product=hypothetical protein;protein_id=WP_017424896.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 204903 205643 . + . ID=gene-NIV78_RS18040;Name=NIV78_RS18040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS18040;pseudo=true NZ_CP100137.1 Protein Homology CDS 204903 205643 . + 0 ID=cds-NIV78_RS18040;Parent=gene-NIV78_RS18040;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424896.1;locus_tag=NIV78_RS18040;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP100137.1 RefSeq gene 205657 205917 . + . ID=gene-NIV78_RS18045;Name=NIV78_RS18045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18045 NZ_CP100137.1 Protein Homology CDS 205657 205917 . + 0 ID=cds-WP_257757718.1;Parent=gene-NIV78_RS18045;Dbxref=Genbank:WP_257757718.1;Name=WP_257757718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878094.1;locus_tag=NIV78_RS18045;product=PAAR domain-containing protein;protein_id=WP_257757718.1;transl_table=11 NZ_CP100137.1 RefSeq gene 206255 207736 . + . ID=gene-NIV78_RS18050;Name=NIV78_RS18050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18050 NZ_CP100137.1 Protein Homology CDS 206255 207736 . + 0 ID=cds-WP_015878093.1;Parent=gene-NIV78_RS18050;Dbxref=Genbank:WP_015878093.1;Name=WP_015878093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878093.1;locus_tag=NIV78_RS18050;product=HAMP domain-containing histidine kinase;protein_id=WP_015878093.1;transl_table=11 NZ_CP100137.1 RefSeq gene 207721 209124 . + . ID=gene-NIV78_RS18055;Name=NIV78_RS18055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18055 NZ_CP100137.1 Protein Homology CDS 207721 209124 . + 0 ID=cds-WP_015878092.1;Parent=gene-NIV78_RS18055;Dbxref=Genbank:WP_015878092.1;Name=WP_015878092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013341326.1;locus_tag=NIV78_RS18055;product=sigma-54 dependent transcriptional regulator;protein_id=WP_015878092.1;transl_table=11 NZ_CP100137.1 RefSeq gene 209281 210027 . + . ID=gene-NIV78_RS18060;Name=NIV78_RS18060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18060 NZ_CP100137.1 Protein Homology CDS 209281 210027 . + 0 ID=cds-WP_015878091.1;Parent=gene-NIV78_RS18060;Dbxref=Genbank:WP_015878091.1;Name=WP_015878091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689633.1;locus_tag=NIV78_RS18060;product=hypothetical protein;protein_id=WP_015878091.1;transl_table=11 NZ_CP100137.1 RefSeq gene 210077 210631 . + . ID=gene-NIV78_RS18065;Name=NIV78_RS18065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18065 NZ_CP100137.1 Protein Homology CDS 210077 210631 . + 0 ID=cds-WP_015878090.1;Parent=gene-NIV78_RS18065;Dbxref=Genbank:WP_015878090.1;Name=WP_015878090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013590329.1;locus_tag=NIV78_RS18065;product=hypothetical protein;protein_id=WP_015878090.1;transl_table=11 NZ_CP100137.1 RefSeq gene 210633 211874 . + . ID=gene-NIV78_RS18070;Name=NIV78_RS18070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18070 NZ_CP100137.1 Protein Homology CDS 210633 211874 . + 0 ID=cds-WP_015878089.1;Parent=gene-NIV78_RS18070;Dbxref=Genbank:WP_015878089.1;Name=WP_015878089.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878089.1;locus_tag=NIV78_RS18070;product=MFS transporter;protein_id=WP_015878089.1;transl_table=11 NZ_CP100137.1 RefSeq gene 212380 213144 . - . ID=gene-NIV78_RS18075;Name=NIV78_RS18075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18075 NZ_CP100137.1 Protein Homology CDS 212380 213144 . - 0 ID=cds-WP_015878088.1;Parent=gene-NIV78_RS18075;Dbxref=Genbank:WP_015878088.1;Name=WP_015878088.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013342584.1;locus_tag=NIV78_RS18075;product=glucose 1-dehydrogenase;protein_id=WP_015878088.1;transl_table=11 NZ_CP100137.1 RefSeq gene 213311 214228 . + . ID=gene-NIV78_RS18080;Name=NIV78_RS18080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18080 NZ_CP100137.1 Protein Homology CDS 213311 214228 . + 0 ID=cds-WP_015878087.1;Parent=gene-NIV78_RS18080;Dbxref=Genbank:WP_015878087.1;Name=WP_015878087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012371928.1;locus_tag=NIV78_RS18080;product=LysR family transcriptional regulator;protein_id=WP_015878087.1;transl_table=11 NZ_CP100137.1 RefSeq gene 214295 214546 . - . ID=gene-NIV78_RS18085;Name=NIV78_RS18085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18085 NZ_CP100137.1 Protein Homology CDS 214295 214546 . - 0 ID=cds-WP_230674521.1;Parent=gene-NIV78_RS18085;Dbxref=Genbank:WP_230674521.1;Name=WP_230674521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424327.1;locus_tag=NIV78_RS18085;product=hypothetical protein;protein_id=WP_230674521.1;transl_table=11 NZ_CP100137.1 RefSeq gene 215025 215468 . + . ID=gene-NIV78_RS18090;Name=NIV78_RS18090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18090 NZ_CP100137.1 Protein Homology CDS 215025 215468 . + 0 ID=cds-WP_026051569.1;Parent=gene-NIV78_RS18090;Dbxref=Genbank:WP_026051569.1;Name=WP_026051569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014253157.1;locus_tag=NIV78_RS18090;product=Hsp20/alpha crystallin family protein;protein_id=WP_026051569.1;transl_table=11 NZ_CP100137.1 RefSeq gene 215497 215904 . + . ID=gene-NIV78_RS18095;Name=NIV78_RS18095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18095 NZ_CP100137.1 Protein Homology CDS 215497 215904 . + 0 ID=cds-WP_015878085.1;Parent=gene-NIV78_RS18095;Dbxref=Genbank:WP_015878085.1;Name=WP_015878085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878085.1;locus_tag=NIV78_RS18095;product=Hsp20/alpha crystallin family protein;protein_id=WP_015878085.1;transl_table=11 NZ_CP100137.1 RefSeq gene 215987 216550 . + . ID=gene-NIV78_RS18100;Name=NIV78_RS18100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18100 NZ_CP100137.1 Protein Homology CDS 215987 216550 . + 0 ID=cds-WP_015878084.1;Parent=gene-NIV78_RS18100;Dbxref=Genbank:WP_015878084.1;Name=WP_015878084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878084.1;locus_tag=NIV78_RS18100;product=Hsp20/alpha crystallin family protein;protein_id=WP_015878084.1;transl_table=11 NZ_CP100137.1 RefSeq gene 216593 217030 . + . ID=gene-NIV78_RS18105;Name=NIV78_RS18105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18105 NZ_CP100137.1 GeneMarkS-2+ CDS 216593 217030 . + 0 ID=cds-WP_124836641.1;Parent=gene-NIV78_RS18105;Dbxref=Genbank:WP_124836641.1;Name=WP_124836641.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS18105;product=hypothetical protein;protein_id=WP_124836641.1;transl_table=11 NZ_CP100137.1 RefSeq gene 217620 218693 . + . ID=gene-NIV78_RS18110;Name=NIV78_RS18110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18110 NZ_CP100137.1 Protein Homology CDS 217620 218693 . + 0 ID=cds-WP_015878083.1;Parent=gene-NIV78_RS18110;Dbxref=Genbank:WP_015878083.1;Name=WP_015878083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878083.1;locus_tag=NIV78_RS18110;product=carotenoid 1%2C2-hydratase;protein_id=WP_015878083.1;transl_table=11 NZ_CP100137.1 RefSeq gene 218644 219849 . + . ID=gene-NIV78_RS18115;Name=NIV78_RS18115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18115 NZ_CP100137.1 Protein Homology CDS 218644 219849 . + 0 ID=cds-WP_230674522.1;Parent=gene-NIV78_RS18115;Dbxref=Genbank:WP_230674522.1;Name=WP_230674522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878082.1;locus_tag=NIV78_RS18115;product=carotenoid 1%2C2-hydratase;protein_id=WP_230674522.1;transl_table=11 NZ_CP100137.1 RefSeq gene 220102 222078 . - . ID=gene-NIV78_RS18120;Name=NIV78_RS18120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18120 NZ_CP100137.1 Protein Homology CDS 220102 222078 . - 0 ID=cds-WP_017424324.1;Parent=gene-NIV78_RS18120;Dbxref=Genbank:WP_017424324.1;Name=WP_017424324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424324.1;locus_tag=NIV78_RS18120;product=alpha-galactosidase;protein_id=WP_017424324.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 222854 222970 . - . ID=gene-NIV78_RS18125;Name=NIV78_RS18125;end_range=222970,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS18125;partial=true;pseudo=true;start_range=.,222854 NZ_CP100137.1 Protein Homology CDS 222854 222970 . - 0 ID=cds-NIV78_RS18125;Parent=gene-NIV78_RS18125;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=222970,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012405348.1;locus_tag=NIV78_RS18125;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,222854;transl_table=11 NZ_CP100137.1 RefSeq gene 223779 225365 . + . ID=gene-NIV78_RS18130;Name=NIV78_RS18130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18130 NZ_CP100137.1 Protein Homology CDS 223779 225365 . + 0 ID=cds-WP_251118970.1;Parent=gene-NIV78_RS18130;Dbxref=Genbank:WP_251118970.1;Name=WP_251118970.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424322.1;locus_tag=NIV78_RS18130;product=methyl-accepting chemotaxis protein;protein_id=WP_251118970.1;transl_table=11 NZ_CP100137.1 RefSeq gene 225384 226189 . - . ID=gene-NIV78_RS18135;Name=NIV78_RS18135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18135 NZ_CP100137.1 Protein Homology CDS 225859 226189 . - 0 ID=cds-WP_257757722.1;Parent=gene-NIV78_RS18135;Dbxref=Genbank:WP_257757722.1;Name=WP_257757722.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611183.1;locus_tag=NIV78_RS18135;product=IS5 family transposase;protein_id=WP_257757722.1;transl_table=11 NZ_CP100137.1 Protein Homology CDS 225384 225859 . - 2 ID=cds-WP_257757722.1;Parent=gene-NIV78_RS18135;Dbxref=Genbank:WP_257757722.1;Name=WP_257757722.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611183.1;locus_tag=NIV78_RS18135;product=IS5 family transposase;protein_id=WP_257757722.1;transl_table=11 NZ_CP100137.1 RefSeq gene 226333 227150 . + . ID=gene-NIV78_RS18140;Name=NIV78_RS18140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18140 NZ_CP100137.1 Protein Homology CDS 226333 226681 . + 0 ID=cds-WP_085962451.1-4;Parent=gene-NIV78_RS18140;Dbxref=Genbank:WP_085962451.1;Name=WP_085962451.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS18140;product=IS5 family transposase;protein_id=WP_085962451.1;transl_table=11 NZ_CP100137.1 Protein Homology CDS 226681 227150 . + 2 ID=cds-WP_085962451.1-4;Parent=gene-NIV78_RS18140;Dbxref=Genbank:WP_085962451.1;Name=WP_085962451.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS18140;product=IS5 family transposase;protein_id=WP_085962451.1;transl_table=11 NZ_CP100137.1 RefSeq gene 227195 228012 . + . ID=gene-NIV78_RS18145;Name=NIV78_RS18145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18145 NZ_CP100137.1 Protein Homology CDS 227195 227543 . + 0 ID=cds-WP_257757723.1;Parent=gene-NIV78_RS18145;Dbxref=Genbank:WP_257757723.1;Name=WP_257757723.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS18145;product=IS5 family transposase;protein_id=WP_257757723.1;transl_table=11 NZ_CP100137.1 Protein Homology CDS 227543 228012 . + 2 ID=cds-WP_257757723.1;Parent=gene-NIV78_RS18145;Dbxref=Genbank:WP_257757723.1;Name=WP_257757723.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS18145;product=IS5 family transposase;protein_id=WP_257757723.1;transl_table=11 NZ_CP100137.1 RefSeq gene 228093 228500 . + . ID=gene-NIV78_RS18150;Name=NIV78_RS18150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18150 NZ_CP100137.1 GeneMarkS-2+ CDS 228093 228500 . + 0 ID=cds-WP_157384246.1;Parent=gene-NIV78_RS18150;Dbxref=Genbank:WP_157384246.1;Name=WP_157384246.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS18150;product=hypothetical protein;protein_id=WP_157384246.1;transl_table=11 NZ_CP100137.1 RefSeq gene 228484 228969 . - . ID=gene-NIV78_RS18155;Name=gspI;gbkey=Gene;gene=gspI;gene_biotype=protein_coding;locus_tag=NIV78_RS18155 NZ_CP100137.1 Protein Homology CDS 228484 228969 . - 0 ID=cds-WP_257758079.1;Parent=gene-NIV78_RS18155;Dbxref=Genbank:WP_257758079.1;Name=WP_257758079.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspI;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732716.1;locus_tag=NIV78_RS18155;product=type II secretion system minor pseudopilin GspI;protein_id=WP_257758079.1;transl_table=11 NZ_CP100137.1 RefSeq gene 229079 229783 . - . ID=gene-NIV78_RS18160;Name=NIV78_RS18160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18160 NZ_CP100137.1 Protein Homology CDS 229079 229783 . - 0 ID=cds-WP_251107731.1;Parent=gene-NIV78_RS18160;Dbxref=Genbank:WP_251107731.1;Name=WP_251107731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732715.1;locus_tag=NIV78_RS18160;product=hypothetical protein;protein_id=WP_251107731.1;transl_table=11 NZ_CP100137.1 RefSeq gene 230389 230916 . + . ID=gene-NIV78_RS18165;Name=NIV78_RS18165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18165 NZ_CP100137.1 GeneMarkS-2+ CDS 230389 230916 . + 0 ID=cds-WP_157384084.1;Parent=gene-NIV78_RS18165;Dbxref=Genbank:WP_157384084.1;Name=WP_157384084.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS18165;product=hypothetical protein;protein_id=WP_157384084.1;transl_table=11 NZ_CP100137.1 RefSeq gene 231297 231818 . + . ID=gene-NIV78_RS18170;Name=NIV78_RS18170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18170 NZ_CP100137.1 Protein Homology CDS 231297 231818 . + 0 ID=cds-WP_017424454.1;Parent=gene-NIV78_RS18170;Dbxref=Genbank:WP_017424454.1;Name=WP_017424454.1;Ontology_term=GO:0006935,GO:0007165;gbkey=CDS;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878078.1;locus_tag=NIV78_RS18170;product=chemotaxis protein CheW;protein_id=WP_017424454.1;transl_table=11 NZ_CP100137.1 RefSeq gene 232572 234638 . + . ID=gene-NIV78_RS18175;Name=NIV78_RS18175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18175 NZ_CP100137.1 Protein Homology CDS 232572 234638 . + 0 ID=cds-WP_015878077.1;Parent=gene-NIV78_RS18175;Dbxref=Genbank:WP_015878077.1;Name=WP_015878077.1;Ontology_term=GO:0004629;gbkey=CDS;go_function=phospholipase C activity|0004629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878077.1;locus_tag=NIV78_RS18175;product=phospholipase C%2C phosphocholine-specific;protein_id=WP_015878077.1;transl_table=11 NZ_CP100137.1 RefSeq gene 234951 236138 . + . ID=gene-NIV78_RS18180;Name=NIV78_RS18180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18180 NZ_CP100137.1 Protein Homology CDS 234951 236138 . + 0 ID=cds-WP_017922669.1;Parent=gene-NIV78_RS18180;Dbxref=Genbank:WP_017922669.1;Name=WP_017922669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397280.1;locus_tag=NIV78_RS18180;product=M20 family metallopeptidase;protein_id=WP_017922669.1;transl_table=11 NZ_CP100137.1 RefSeq gene 236308 236811 . + . ID=gene-NIV78_RS18185;Name=NIV78_RS18185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18185 NZ_CP100137.1 Protein Homology CDS 236308 236811 . + 0 ID=cds-WP_015878075.1;Parent=gene-NIV78_RS18185;Dbxref=Genbank:WP_015878075.1;Name=WP_015878075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217601.1;locus_tag=NIV78_RS18185;product=GNAT family N-acetyltransferase;protein_id=WP_015878075.1;transl_table=11 NZ_CP100137.1 RefSeq gene 236833 237642 . - . ID=gene-NIV78_RS18190;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=NIV78_RS18190 NZ_CP100137.1 Protein Homology CDS 236833 237642 . - 0 ID=cds-WP_043225115.1;Parent=gene-NIV78_RS18190;Dbxref=Genbank:WP_043225115.1;Name=WP_043225115.1;Ontology_term=GO:0036211;gbkey=CDS;gene=map;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878074.1;locus_tag=NIV78_RS18190;product=type I methionyl aminopeptidase;protein_id=WP_043225115.1;transl_table=11 NZ_CP100137.1 RefSeq gene 237642 237866 . - . ID=gene-NIV78_RS18195;Name=NIV78_RS18195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18195 NZ_CP100137.1 Protein Homology CDS 237642 237866 . - 0 ID=cds-WP_015878073.1;Parent=gene-NIV78_RS18195;Dbxref=Genbank:WP_015878073.1;Name=WP_015878073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878073.1;locus_tag=NIV78_RS18195;product=ParD-like family protein;protein_id=WP_015878073.1;transl_table=11 NZ_CP100137.1 RefSeq gene 238370 239938 . - . ID=gene-NIV78_RS18200;Name=NIV78_RS18200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18200 NZ_CP100137.1 Protein Homology CDS 238370 239938 . - 0 ID=cds-WP_017922672.1;Parent=gene-NIV78_RS18200;Dbxref=Genbank:WP_017922672.1;Name=WP_017922672.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF024140.2;locus_tag=NIV78_RS18200;product=methyl-accepting chemotaxis protein;protein_id=WP_017922672.1;transl_table=11 NZ_CP100137.1 RefSeq gene 240039 240986 . - . ID=gene-NIV78_RS18205;Name=NIV78_RS18205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18205 NZ_CP100137.1 Protein Homology CDS 240039 240986 . - 0 ID=cds-WP_017424451.1;Parent=gene-NIV78_RS18205;Dbxref=Genbank:WP_017424451.1;Name=WP_017424451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424451.1;locus_tag=NIV78_RS18205;product=transporter;protein_id=WP_017424451.1;transl_table=11 NZ_CP100137.1 RefSeq gene 241022 241558 . - . ID=gene-NIV78_RS18210;Name=NIV78_RS18210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18210 NZ_CP100137.1 Protein Homology CDS 241022 241558 . - 0 ID=cds-WP_169511257.1;Parent=gene-NIV78_RS18210;Dbxref=Genbank:WP_169511257.1;Name=WP_169511257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726171.1;locus_tag=NIV78_RS18210;product=flavin reductase family protein;protein_id=WP_169511257.1;transl_table=11 NZ_CP100137.1 RefSeq gene 241579 242817 . - . ID=gene-NIV78_RS18215;Name=NIV78_RS18215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18215 NZ_CP100137.1 Protein Homology CDS 241579 242817 . - 0 ID=cds-WP_257757726.1;Parent=gene-NIV78_RS18215;Dbxref=Genbank:WP_257757726.1;Name=WP_257757726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424450.1;locus_tag=NIV78_RS18215;product=FAD-binding oxidoreductase;protein_id=WP_257757726.1;transl_table=11 NZ_CP100137.1 RefSeq gene 242869 243657 . - . ID=gene-NIV78_RS18220;Name=NIV78_RS18220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18220 NZ_CP100137.1 Protein Homology CDS 242869 243657 . - 0 ID=cds-WP_017424449.1;Parent=gene-NIV78_RS18220;Dbxref=Genbank:WP_017424449.1;Name=WP_017424449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878063.1;locus_tag=NIV78_RS18220;product=SDR family oxidoreductase;protein_id=WP_017424449.1;transl_table=11 NZ_CP100137.1 RefSeq gene 243679 244926 . - . ID=gene-NIV78_RS18225;Name=NIV78_RS18225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18225 NZ_CP100137.1 Protein Homology CDS 243679 244926 . - 0 ID=cds-WP_017922673.1;Parent=gene-NIV78_RS18225;Dbxref=Genbank:WP_017922673.1;Name=WP_017922673.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424448.1;locus_tag=NIV78_RS18225;product=dienelactone hydrolase family protein;protein_id=WP_017922673.1;transl_table=11 NZ_CP100137.1 RefSeq gene 245267 246301 . + . ID=gene-NIV78_RS18230;Name=NIV78_RS18230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18230 NZ_CP100137.1 Protein Homology CDS 245267 246301 . + 0 ID=cds-WP_015878061.1;Parent=gene-NIV78_RS18230;Dbxref=Genbank:WP_015878061.1;Name=WP_015878061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878061.1;locus_tag=NIV78_RS18230;product=AraC family transcriptional regulator;protein_id=WP_015878061.1;transl_table=11 NZ_CP100137.1 RefSeq gene 247273 248910 . + . ID=gene-NIV78_RS18235;Name=NIV78_RS18235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18235 NZ_CP100137.1 Protein Homology CDS 247273 248910 . + 0 ID=cds-WP_169511255.1;Parent=gene-NIV78_RS18235;Dbxref=Genbank:WP_169511255.1;Name=WP_169511255.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878060.1;locus_tag=NIV78_RS18235;product=methyl-accepting chemotaxis protein;protein_id=WP_169511255.1;transl_table=11 NZ_CP100137.1 RefSeq gene 249933 250424 . - . ID=gene-NIV78_RS18240;Name=NIV78_RS18240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18240 NZ_CP100137.1 Protein Homology CDS 249933 250424 . - 0 ID=cds-WP_017924237.1;Parent=gene-NIV78_RS18240;Dbxref=Genbank:WP_017924237.1;Name=WP_017924237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425482.1;locus_tag=NIV78_RS18240;product=hypothetical protein;protein_id=WP_017924237.1;transl_table=11 NZ_CP100137.1 RefSeq gene 250510 251085 . - . ID=gene-NIV78_RS18245;Name=NIV78_RS18245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18245 NZ_CP100137.1 GeneMarkS-2+ CDS 250510 251085 . - 0 ID=cds-WP_127913887.1;Parent=gene-NIV78_RS18245;Dbxref=Genbank:WP_127913887.1;Name=WP_127913887.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS18245;product=hypothetical protein;protein_id=WP_127913887.1;transl_table=11 NZ_CP100137.1 RefSeq gene 251236 252954 . - . ID=gene-NIV78_RS18250;Name=NIV78_RS18250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18250 NZ_CP100137.1 Protein Homology CDS 251236 252954 . - 0 ID=cds-WP_257757401.1-2;Parent=gene-NIV78_RS18250;Dbxref=Genbank:WP_257757401.1;Name=WP_257757401.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876330.1;locus_tag=NIV78_RS18250;product=methyl-accepting chemotaxis protein;protein_id=WP_257757401.1;transl_table=11 NZ_CP100137.1 RefSeq gene 253696 255363 . + . ID=gene-NIV78_RS18255;Name=NIV78_RS18255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18255 NZ_CP100137.1 Protein Homology CDS 253696 255363 . + 0 ID=cds-WP_017923703.1;Parent=gene-NIV78_RS18255;Dbxref=Genbank:WP_017923703.1;Name=WP_017923703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878058.1;locus_tag=NIV78_RS18255;product=ATP-binding protein;protein_id=WP_017923703.1;transl_table=11 NZ_CP100137.1 RefSeq gene 255360 258899 . + . ID=gene-NIV78_RS18260;Name=NIV78_RS18260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18260 NZ_CP100137.1 Protein Homology CDS 255360 258899 . + 0 ID=cds-WP_251107733.1;Parent=gene-NIV78_RS18260;Dbxref=Genbank:WP_251107733.1;Name=WP_251107733.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878057.1;locus_tag=NIV78_RS18260;product=amino acid permease;protein_id=WP_251107733.1;transl_table=11 NZ_CP100137.1 RefSeq gene 259141 259911 . + . ID=gene-NIV78_RS18265;Name=NIV78_RS18265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18265 NZ_CP100137.1 Protein Homology CDS 259141 259911 . + 0 ID=cds-WP_015878056.1;Parent=gene-NIV78_RS18265;Dbxref=Genbank:WP_015878056.1;Name=WP_015878056.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878056.1;locus_tag=NIV78_RS18265;product=response regulator;protein_id=WP_015878056.1;transl_table=11 NZ_CP100137.1 RefSeq gene 260388 261482 . + . ID=gene-NIV78_RS18270;Name=NIV78_RS18270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18270 NZ_CP100137.1 Protein Homology CDS 260388 261482 . + 0 ID=cds-WP_017423729.1;Parent=gene-NIV78_RS18270;Dbxref=Genbank:WP_017423729.1;Name=WP_017423729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878055.1;locus_tag=NIV78_RS18270;product=NAD(P) transhydrogenase subunit alpha;protein_id=WP_017423729.1;transl_table=11 NZ_CP100137.1 RefSeq gene 261539 261829 . + . ID=gene-NIV78_RS18275;Name=NIV78_RS18275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18275 NZ_CP100137.1 Protein Homology CDS 261539 261829 . + 0 ID=cds-WP_015878054.1;Parent=gene-NIV78_RS18275;Dbxref=Genbank:WP_015878054.1;Name=WP_015878054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878054.1;locus_tag=NIV78_RS18275;product=NAD(P) transhydrogenase subunit alpha;protein_id=WP_015878054.1;transl_table=11 NZ_CP100137.1 RefSeq gene 261833 263257 . + . ID=gene-NIV78_RS18280;Name=NIV78_RS18280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18280 NZ_CP100137.1 Protein Homology CDS 261833 263257 . + 0 ID=cds-WP_017423730.1;Parent=gene-NIV78_RS18280;Dbxref=Genbank:WP_017423730.1;Name=WP_017423730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019938912.1;locus_tag=NIV78_RS18280;product=NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta;protein_id=WP_017423730.1;transl_table=11 NZ_CP100137.1 RefSeq gene 263288 264679 . + . ID=gene-NIV78_RS18285;Name=NIV78_RS18285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18285 NZ_CP100137.1 Protein Homology CDS 263288 264679 . + 0 ID=cds-WP_015878053.1;Parent=gene-NIV78_RS18285;Dbxref=Genbank:WP_015878053.1;Name=WP_015878053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878053.1;locus_tag=NIV78_RS18285;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_015878053.1;transl_table=11 NZ_CP100137.1 RefSeq gene 264789 265817 . + . ID=gene-NIV78_RS18290;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=NIV78_RS18290 NZ_CP100137.1 Protein Homology CDS 264789 265817 . + 0 ID=cds-WP_017425007.1;Parent=gene-NIV78_RS18290;Dbxref=Genbank:WP_017425007.1;Name=WP_017425007.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009589263.1;locus_tag=NIV78_RS18290;product=alcohol dehydrogenase AdhP;protein_id=WP_017425007.1;transl_table=11 NZ_CP100137.1 RefSeq gene 265819 267093 . - . ID=gene-NIV78_RS18295;Name=phaZ;gbkey=Gene;gene=phaZ;gene_biotype=protein_coding;locus_tag=NIV78_RS18295 NZ_CP100137.1 Protein Homology CDS 265819 267093 . - 0 ID=cds-WP_017923063.1;Parent=gene-NIV78_RS18295;Dbxref=Genbank:WP_017923063.1;Name=WP_017923063.1;gbkey=CDS;gene=phaZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878051.1;locus_tag=NIV78_RS18295;product=polyhydroxyalkanoate depolymerase;protein_id=WP_017923063.1;transl_table=11 NZ_CP100137.1 RefSeq gene 267237 267764 . + . ID=gene-NIV78_RS18300;Name=NIV78_RS18300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18300 NZ_CP100137.1 Protein Homology CDS 267237 267764 . + 0 ID=cds-WP_017923062.1;Parent=gene-NIV78_RS18300;Dbxref=Genbank:WP_017923062.1;Name=WP_017923062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878050.1;locus_tag=NIV78_RS18300;product=flavodoxin;protein_id=WP_017923062.1;transl_table=11 NZ_CP100137.1 RefSeq gene 267960 268610 . + . ID=gene-NIV78_RS18305;Name=NIV78_RS18305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18305 NZ_CP100137.1 Protein Homology CDS 267960 268610 . + 0 ID=cds-WP_015878049.1;Parent=gene-NIV78_RS18305;Dbxref=Genbank:WP_015878049.1;Name=WP_015878049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878049.1;locus_tag=NIV78_RS18305;product=BON domain-containing protein;protein_id=WP_015878049.1;transl_table=11 NZ_CP100137.1 RefSeq gene 268848 269393 . + . ID=gene-NIV78_RS18310;Name=NIV78_RS18310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18310 NZ_CP100137.1 Protein Homology CDS 268848 269393 . + 0 ID=cds-WP_015878048.1;Parent=gene-NIV78_RS18310;Dbxref=Genbank:WP_015878048.1;Name=WP_015878048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878048.1;locus_tag=NIV78_RS18310;product=Hsp20/alpha crystallin family protein;protein_id=WP_015878048.1;transl_table=11 NZ_CP100137.1 RefSeq gene 269525 269899 . + . ID=gene-NIV78_RS18315;Name=NIV78_RS18315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18315 NZ_CP100137.1 GeneMarkS-2+ CDS 269525 269899 . + 0 ID=cds-WP_045678785.1;Parent=gene-NIV78_RS18315;Dbxref=Genbank:WP_045678785.1;Name=WP_045678785.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS18315;product=hypothetical protein;protein_id=WP_045678785.1;transl_table=11 NZ_CP100137.1 RefSeq gene 270154 271863 . - . ID=gene-NIV78_RS18320;Name=NIV78_RS18320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18320 NZ_CP100137.1 Protein Homology CDS 270154 271863 . - 0 ID=cds-WP_251107735.1;Parent=gene-NIV78_RS18320;Dbxref=Genbank:WP_251107735.1;Name=WP_251107735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878046.1;locus_tag=NIV78_RS18320;product=AAA family ATPase;protein_id=WP_251107735.1;transl_table=11 NZ_CP100137.1 RefSeq gene 272580 272819 . + . ID=gene-NIV78_RS18325;Name=NIV78_RS18325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18325 NZ_CP100137.1 Protein Homology CDS 272580 272819 . + 0 ID=cds-WP_015878045.1;Parent=gene-NIV78_RS18325;Dbxref=Genbank:WP_015878045.1;Name=WP_015878045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009690622.1;locus_tag=NIV78_RS18325;product=hypothetical protein;protein_id=WP_015878045.1;transl_table=11 NZ_CP100137.1 RefSeq gene 272888 273184 . - . ID=gene-NIV78_RS18330;Name=NIV78_RS18330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18330 NZ_CP100137.1 Protein Homology CDS 272888 273184 . - 0 ID=cds-WP_085962442.1;Parent=gene-NIV78_RS18330;Dbxref=Genbank:WP_085962442.1;Name=WP_085962442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415467.1;locus_tag=NIV78_RS18330;product=cytochrome C;protein_id=WP_085962442.1;transl_table=11 NZ_CP100137.1 RefSeq gene 273262 274263 . - . ID=gene-NIV78_RS18335;Name=NIV78_RS18335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18335 NZ_CP100137.1 Protein Homology CDS 273262 274263 . - 0 ID=cds-WP_017924472.1;Parent=gene-NIV78_RS18335;Dbxref=Genbank:WP_017924472.1;Name=WP_017924472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878043.1;locus_tag=NIV78_RS18335;product=nitroreductase family protein;protein_id=WP_017924472.1;transl_table=11 NZ_CP100137.1 RefSeq gene 274441 275430 . + . ID=gene-NIV78_RS18340;Name=NIV78_RS18340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18340 NZ_CP100137.1 Protein Homology CDS 274441 275430 . + 0 ID=cds-WP_015878042.1;Parent=gene-NIV78_RS18340;Dbxref=Genbank:WP_015878042.1;Name=WP_015878042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752861.1;locus_tag=NIV78_RS18340;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_015878042.1;transl_table=11 NZ_CP100137.1 RefSeq gene 275628 276083 . + . ID=gene-NIV78_RS18345;Name=NIV78_RS18345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18345 NZ_CP100137.1 Protein Homology CDS 275628 276083 . + 0 ID=cds-WP_043194535.1;Parent=gene-NIV78_RS18345;Dbxref=Genbank:WP_043194535.1;Name=WP_043194535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878041.1;locus_tag=NIV78_RS18345;product=universal stress protein;protein_id=WP_043194535.1;transl_table=11 NZ_CP100137.1 RefSeq gene 276139 276969 . - . ID=gene-NIV78_RS18350;Name=NIV78_RS18350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18350 NZ_CP100137.1 Protein Homology CDS 276139 276969 . - 0 ID=cds-WP_251107736.1;Parent=gene-NIV78_RS18350;Dbxref=Genbank:WP_251107736.1;Name=WP_251107736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880393.1;locus_tag=NIV78_RS18350;product=universal stress protein;protein_id=WP_251107736.1;transl_table=11 NZ_CP100137.1 RefSeq gene 277074 278270 . - . ID=gene-NIV78_RS18355;Name=NIV78_RS18355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18355 NZ_CP100137.1 Protein Homology CDS 277074 278270 . - 0 ID=cds-WP_017924232.1;Parent=gene-NIV78_RS18355;Dbxref=Genbank:WP_017924232.1;Name=WP_017924232.1;Ontology_term=GO:0006083,GO:0006113,GO:0008776,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=acetate kinase activity|0008776||IEA;go_process=acetate metabolic process|0006083||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878039.1;locus_tag=NIV78_RS18355;product=acetate/propionate family kinase;protein_id=WP_017924232.1;transl_table=11 NZ_CP100137.1 RefSeq gene 278597 280462 . + . ID=gene-NIV78_RS18360;Name=NIV78_RS18360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18360 NZ_CP100137.1 Protein Homology CDS 278597 280462 . + 0 ID=cds-WP_015878038.1;Parent=gene-NIV78_RS18360;Dbxref=Genbank:WP_015878038.1;Name=WP_015878038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752852.1;locus_tag=NIV78_RS18360;product=alpha/beta fold hydrolase;protein_id=WP_015878038.1;transl_table=11 NZ_CP100137.1 RefSeq gene 280459 281472 . + . ID=gene-NIV78_RS18365;Name=NIV78_RS18365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18365 NZ_CP100137.1 Protein Homology CDS 280459 281472 . + 0 ID=cds-WP_015878037.1;Parent=gene-NIV78_RS18365;Dbxref=Genbank:WP_015878037.1;Name=WP_015878037.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698089.1;locus_tag=NIV78_RS18365;product=bifunctional enoyl-CoA hydratase/phosphate acetyltransferase;protein_id=WP_015878037.1;transl_table=11 NZ_CP100137.1 RefSeq gene 281677 282438 . - . ID=gene-NIV78_RS18370;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=NIV78_RS18370 NZ_CP100137.1 Protein Homology CDS 281677 282438 . - 0 ID=cds-WP_232252132.1;Parent=gene-NIV78_RS18370;Dbxref=Genbank:WP_232252132.1;Name=WP_232252132.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=fnr;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010094535.1;locus_tag=NIV78_RS18370;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_232252132.1;transl_table=11 NZ_CP100137.1 RefSeq gene 282787 283284 . - . ID=gene-NIV78_RS18375;Name=NIV78_RS18375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18375 NZ_CP100137.1 Protein Homology CDS 282787 283284 . - 0 ID=cds-WP_015878034.1;Parent=gene-NIV78_RS18375;Dbxref=Genbank:WP_015878034.1;Name=WP_015878034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332092.1;locus_tag=NIV78_RS18375;product=universal stress protein;protein_id=WP_015878034.1;transl_table=11 NZ_CP100137.1 RefSeq gene 283540 284289 . + . ID=gene-NIV78_RS18380;Name=phbB;gbkey=Gene;gene=phbB;gene_biotype=protein_coding;locus_tag=NIV78_RS18380 NZ_CP100137.1 Protein Homology CDS 283540 284289 . + 0 ID=cds-WP_015878033.1;Parent=gene-NIV78_RS18380;Dbxref=Genbank:WP_015878033.1;Name=WP_015878033.1;Ontology_term=GO:0042619,GO:0018454;gbkey=CDS;gene=phbB;go_function=acetoacetyl-CoA reductase activity|0018454||IEA;go_process=poly-hydroxybutyrate biosynthetic process|0042619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878033.1;locus_tag=NIV78_RS18380;product=acetoacetyl-CoA reductase;protein_id=WP_015878033.1;transl_table=11 NZ_CP100137.1 RefSeq gene 284286 284801 . + . ID=gene-NIV78_RS18385;Name=NIV78_RS18385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18385 NZ_CP100137.1 Protein Homology CDS 284286 284801 . + 0 ID=cds-WP_017924452.1;Parent=gene-NIV78_RS18385;Dbxref=Genbank:WP_017924452.1;Name=WP_017924452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878032.1;locus_tag=NIV78_RS18385;product=universal stress protein;protein_id=WP_017924452.1;transl_table=11 NZ_CP100137.1 RefSeq gene 284938 285426 . + . ID=gene-NIV78_RS18390;Name=NIV78_RS18390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18390 NZ_CP100137.1 Protein Homology CDS 284938 285426 . + 0 ID=cds-WP_100556349.1;Parent=gene-NIV78_RS18390;Dbxref=Genbank:WP_100556349.1;Name=WP_100556349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878031.1;locus_tag=NIV78_RS18390;product=universal stress protein;protein_id=WP_100556349.1;transl_table=11 NZ_CP100137.1 RefSeq gene 285401 285625 . + . ID=gene-NIV78_RS18395;Name=NIV78_RS18395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18395 NZ_CP100137.1 Protein Homology CDS 285401 285625 . + 0 ID=cds-WP_017924684.1;Parent=gene-NIV78_RS18395;Dbxref=Genbank:WP_017924684.1;Name=WP_017924684.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022625.2;locus_tag=NIV78_RS18395;product=DUF2964 family protein;protein_id=WP_017924684.1;transl_table=11 NZ_CP100137.1 RefSeq gene 285802 286452 . + . ID=gene-NIV78_RS18400;Name=NIV78_RS18400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18400 NZ_CP100137.1 Protein Homology CDS 285802 286452 . + 0 ID=cds-WP_015878030.1;Parent=gene-NIV78_RS18400;Dbxref=Genbank:WP_015878030.1;Name=WP_015878030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878030.1;locus_tag=NIV78_RS18400;product=BON domain-containing protein;protein_id=WP_015878030.1;transl_table=11 NZ_CP100137.1 RefSeq gene 286572 286934 . + . ID=gene-NIV78_RS18405;Name=NIV78_RS18405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18405 NZ_CP100137.1 Protein Homology CDS 286572 286934 . + 0 ID=cds-WP_015878029.1;Parent=gene-NIV78_RS18405;Dbxref=Genbank:WP_015878029.1;Name=WP_015878029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424212.1;locus_tag=NIV78_RS18405;product=hypothetical protein;protein_id=WP_015878029.1;transl_table=11 NZ_CP100137.1 RefSeq gene 286915 287286 . - . ID=gene-NIV78_RS18410;Name=NIV78_RS18410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18410 NZ_CP100137.1 Protein Homology CDS 286915 287286 . - 0 ID=cds-WP_015878028.1;Parent=gene-NIV78_RS18410;Dbxref=Genbank:WP_015878028.1;Name=WP_015878028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698107.1;locus_tag=NIV78_RS18410;product=DUF3564 domain-containing protein;protein_id=WP_015878028.1;transl_table=11 NZ_CP100137.1 RefSeq gene 287561 288205 . - . ID=gene-NIV78_RS18415;Name=NIV78_RS18415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18415 NZ_CP100137.1 Protein Homology CDS 287561 288205 . - 0 ID=cds-WP_015878027.1;Parent=gene-NIV78_RS18415;Dbxref=Genbank:WP_015878027.1;Name=WP_015878027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329510.1;locus_tag=NIV78_RS18415;product=response regulator transcription factor;protein_id=WP_015878027.1;transl_table=11 NZ_CP100137.1 RefSeq gene 288202 290265 . - . ID=gene-NIV78_RS18420;Name=NIV78_RS18420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18420 NZ_CP100137.1 Protein Homology CDS 288202 290265 . - 0 ID=cds-WP_017922608.1;Parent=gene-NIV78_RS18420;Dbxref=Genbank:WP_017922608.1;Name=WP_017922608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878026.1;locus_tag=NIV78_RS18420;product=PAS domain S-box protein;protein_id=WP_017922608.1;transl_table=11 NZ_CP100137.1 RefSeq gene 290387 291226 . - . ID=gene-NIV78_RS18425;Name=NIV78_RS18425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18425 NZ_CP100137.1 Protein Homology CDS 290387 291226 . - 0 ID=cds-WP_017922609.1;Parent=gene-NIV78_RS18425;Dbxref=Genbank:WP_017922609.1;Name=WP_017922609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424211.1;locus_tag=NIV78_RS18425;product=universal stress protein;protein_id=WP_017922609.1;transl_table=11 NZ_CP100137.1 RefSeq gene 291223 291783 . - . ID=gene-NIV78_RS18430;Name=NIV78_RS18430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18430 NZ_CP100137.1 Protein Homology CDS 291223 291783 . - 0 ID=cds-WP_017424210.1;Parent=gene-NIV78_RS18430;Dbxref=Genbank:WP_017424210.1;Name=WP_017424210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424210.1;locus_tag=NIV78_RS18430;product=universal stress protein;protein_id=WP_017424210.1;transl_table=11 NZ_CP100137.1 RefSeq gene 291847 292686 . - . ID=gene-NIV78_RS18435;Name=NIV78_RS18435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18435 NZ_CP100137.1 Protein Homology CDS 291847 292686 . - 0 ID=cds-WP_017424209.1;Parent=gene-NIV78_RS18435;Dbxref=Genbank:WP_017424209.1;Name=WP_017424209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009968117.1;locus_tag=NIV78_RS18435;product=universal stress protein;protein_id=WP_017424209.1;transl_table=11 NZ_CP100137.1 RefSeq gene 292823 293026 . - . ID=gene-NIV78_RS18440;Name=NIV78_RS18440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18440 NZ_CP100137.1 Protein Homology CDS 292823 293026 . - 0 ID=cds-WP_015878022.1;Parent=gene-NIV78_RS18440;Dbxref=Genbank:WP_015878022.1;Name=WP_015878022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003419650.1;locus_tag=NIV78_RS18440;product=cold-shock protein;protein_id=WP_015878022.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 293292 293507 . - . ID=gene-NIV78_RS18445;Name=NIV78_RS18445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS18445;partial=true;pseudo=true;start_range=.,293292 NZ_CP100137.1 Protein Homology CDS 293292 293507 . - 0 ID=cds-NIV78_RS18445;Parent=gene-NIV78_RS18445;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732717.1;locus_tag=NIV78_RS18445;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,293292;transl_table=11 NZ_CP100137.1 RefSeq gene 294021 294629 . + . ID=gene-NIV78_RS18450;Name=NIV78_RS18450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18450 NZ_CP100137.1 GeneMarkS-2+ CDS 294021 294629 . + 0 ID=cds-WP_043225054.1;Parent=gene-NIV78_RS18450;Dbxref=Genbank:WP_043225054.1;Name=WP_043225054.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS18450;product=hypothetical protein;protein_id=WP_043225054.1;transl_table=11 NZ_CP100137.1 RefSeq gene 295158 295709 . + . ID=gene-NIV78_RS18455;Name=NIV78_RS18455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18455 NZ_CP100137.1 GeneMarkS-2+ CDS 295158 295709 . + 0 ID=cds-WP_232734588.1;Parent=gene-NIV78_RS18455;Dbxref=Genbank:WP_232734588.1;Name=WP_232734588.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS18455;product=hypothetical protein;protein_id=WP_232734588.1;transl_table=11 NZ_CP100137.1 RefSeq gene 296387 297322 . + . ID=gene-NIV78_RS18460;Name=NIV78_RS18460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18460 NZ_CP100137.1 Protein Homology CDS 296387 297322 . + 0 ID=cds-WP_015878021.1;Parent=gene-NIV78_RS18460;Dbxref=Genbank:WP_015878021.1;Name=WP_015878021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013801874.1;locus_tag=NIV78_RS18460;product=LysR substrate-binding domain-containing protein;protein_id=WP_015878021.1;transl_table=11 NZ_CP100137.1 RefSeq gene 298036 298230 . + . ID=gene-NIV78_RS18465;Name=NIV78_RS18465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18465 NZ_CP100137.1 Protein Homology CDS 298036 298230 . + 0 ID=cds-WP_088499518.1;Parent=gene-NIV78_RS18465;Dbxref=Genbank:WP_088499518.1;Name=WP_088499518.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012422.2;locus_tag=NIV78_RS18465;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_088499518.1;transl_table=11 NZ_CP100137.1 RefSeq gene 298267 298692 . - . ID=gene-NIV78_RS18470;Name=NIV78_RS18470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18470 NZ_CP100137.1 Protein Homology CDS 298267 298692 . - 0 ID=cds-WP_026051552.1;Parent=gene-NIV78_RS18470;Dbxref=Genbank:WP_026051552.1;Name=WP_026051552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010096477.1;locus_tag=NIV78_RS18470;product=acyl-CoA thioesterase;protein_id=WP_026051552.1;transl_table=11 NZ_CP100137.1 RefSeq gene 298896 299996 . + . ID=gene-NIV78_RS18475;Name=NIV78_RS18475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18475 NZ_CP100137.1 Protein Homology CDS 298896 299996 . + 0 ID=cds-WP_017922613.1;Parent=gene-NIV78_RS18475;Dbxref=Genbank:WP_017922613.1;Name=WP_017922613.1;Ontology_term=GO:0009423,GO:0003849;gbkey=CDS;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424204.1;locus_tag=NIV78_RS18475;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_017922613.1;transl_table=11 NZ_CP100137.1 RefSeq gene 300008 301267 . + . ID=gene-NIV78_RS18480;Name=NIV78_RS18480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18480 NZ_CP100137.1 Protein Homology CDS 300008 301267 . + 0 ID=cds-WP_017424203.1;Parent=gene-NIV78_RS18480;Dbxref=Genbank:WP_017424203.1;Name=WP_017424203.1;Ontology_term=GO:0051537;gbkey=CDS;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424203.1;locus_tag=NIV78_RS18480;product=Rieske 2Fe-2S domain-containing protein;protein_id=WP_017424203.1;transl_table=11 NZ_CP100137.1 RefSeq gene 301268 301801 . + . ID=gene-NIV78_RS18485;Name=NIV78_RS18485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18485 NZ_CP100137.1 Protein Homology CDS 301268 301801 . + 0 ID=cds-WP_015878017.1;Parent=gene-NIV78_RS18485;Dbxref=Genbank:WP_015878017.1;Name=WP_015878017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878017.1;locus_tag=NIV78_RS18485;product=aromatic-ring-hydroxylating dioxygenase subunit beta;protein_id=WP_015878017.1;transl_table=11 NZ_CP100137.1 RefSeq gene 301811 302173 . + . ID=gene-NIV78_RS18490;Name=NIV78_RS18490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18490 NZ_CP100137.1 Protein Homology CDS 301811 302173 . + 0 ID=cds-WP_017424202.1;Parent=gene-NIV78_RS18490;Dbxref=Genbank:WP_017424202.1;Name=WP_017424202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424202.1;locus_tag=NIV78_RS18490;product=non-heme iron oxygenase ferredoxin subunit;protein_id=WP_017424202.1;transl_table=11 NZ_CP100137.1 RefSeq gene 302170 302457 . + . ID=gene-NIV78_RS18495;Name=NIV78_RS18495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18495 NZ_CP100137.1 Protein Homology CDS 302170 302457 . + 0 ID=cds-WP_015878015.1;Parent=gene-NIV78_RS18495;Dbxref=Genbank:WP_015878015.1;Name=WP_015878015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878015.1;locus_tag=NIV78_RS18495;product=DUF1330 domain-containing protein;protein_id=WP_015878015.1;transl_table=11 NZ_CP100137.1 RefSeq gene 302498 302815 . + . ID=gene-NIV78_RS18500;Name=NIV78_RS18500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18500 NZ_CP100137.1 Protein Homology CDS 302498 302815 . + 0 ID=cds-WP_015878014.1;Parent=gene-NIV78_RS18500;Dbxref=Genbank:WP_015878014.1;Name=WP_015878014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878014.1;locus_tag=NIV78_RS18500;product=DUF1330 domain-containing protein;protein_id=WP_015878014.1;transl_table=11 NZ_CP100137.1 RefSeq gene 302812 304086 . + . ID=gene-NIV78_RS18505;Name=NIV78_RS18505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18505 NZ_CP100137.1 Protein Homology CDS 302812 304086 . + 0 ID=cds-WP_017922614.1;Parent=gene-NIV78_RS18505;Dbxref=Genbank:WP_017922614.1;Name=WP_017922614.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878013.1;locus_tag=NIV78_RS18505;product=FAD-dependent monooxygenase;protein_id=WP_017922614.1;transl_table=11 NZ_CP100137.1 RefSeq gene 304512 305708 . - . ID=gene-NIV78_RS18510;Name=NIV78_RS18510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18510 NZ_CP100137.1 Protein Homology CDS 304512 305708 . - 0 ID=cds-WP_017424201.1;Parent=gene-NIV78_RS18510;Dbxref=Genbank:WP_017424201.1;Name=WP_017424201.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424201.1;locus_tag=NIV78_RS18510;product=arabinose transporter;protein_id=WP_017424201.1;transl_table=11 NZ_CP100137.1 RefSeq gene 305732 307270 . - . ID=gene-NIV78_RS18515;Name=NIV78_RS18515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18515 NZ_CP100137.1 Protein Homology CDS 305732 307270 . - 0 ID=cds-WP_015878011.1;Parent=gene-NIV78_RS18515;Dbxref=Genbank:WP_015878011.1;Name=WP_015878011.1;Ontology_term=GO:0006855,GO:0009410,GO:0005887;gbkey=CDS;go_component=integral component of plasma membrane|0005887||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA,response to xenobiotic stimulus|0009410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878011.1;locus_tag=NIV78_RS18515;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_015878011.1;transl_table=11 NZ_CP100137.1 RefSeq gene 307273 308469 . - . ID=gene-NIV78_RS18520;Name=NIV78_RS18520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18520 NZ_CP100137.1 Protein Homology CDS 307273 308469 . - 0 ID=cds-WP_257757766.1;Parent=gene-NIV78_RS18520;Dbxref=Genbank:WP_257757766.1;Name=WP_257757766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878010.1;locus_tag=NIV78_RS18520;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_257757766.1;transl_table=11 NZ_CP100137.1 RefSeq gene 308466 309914 . - . ID=gene-NIV78_RS18525;Name=NIV78_RS18525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18525 NZ_CP100137.1 Protein Homology CDS 308466 309914 . - 0 ID=cds-WP_100556346.1;Parent=gene-NIV78_RS18525;Dbxref=Genbank:WP_100556346.1;Name=WP_100556346.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: protein motif:HMM:TIGR01845.1;locus_tag=NIV78_RS18525;product=efflux transporter outer membrane subunit;protein_id=WP_100556346.1;transl_table=11 NZ_CP100137.1 RefSeq gene 310073 310549 . - . ID=gene-NIV78_RS18530;Name=NIV78_RS18530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18530 NZ_CP100137.1 Protein Homology CDS 310073 310549 . - 0 ID=cds-WP_045678788.1;Parent=gene-NIV78_RS18530;Dbxref=Genbank:WP_045678788.1;Name=WP_045678788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878008.1;locus_tag=NIV78_RS18530;product=shikimate kinase;protein_id=WP_045678788.1;transl_table=11 NZ_CP100137.1 RefSeq gene 310585 311265 . - . ID=gene-NIV78_RS18535;Name=NIV78_RS18535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18535 NZ_CP100137.1 GeneMarkS-2+ CDS 310585 311265 . - 0 ID=cds-WP_017433221.1;Parent=gene-NIV78_RS18535;Dbxref=Genbank:WP_017433221.1;Name=WP_017433221.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS18535;product=hypothetical protein;protein_id=WP_017433221.1;transl_table=11 NZ_CP100137.1 RefSeq gene 311262 312398 . - . ID=gene-NIV78_RS18540;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=NIV78_RS18540 NZ_CP100137.1 Protein Homology CDS 311262 312398 . - 0 ID=cds-WP_017424191.1;Parent=gene-NIV78_RS18540;Dbxref=Genbank:WP_017424191.1;Name=WP_017424191.1;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;gene=pheA;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424191.1;locus_tag=NIV78_RS18540;product=prephenate dehydratase;protein_id=WP_017424191.1;transl_table=11 NZ_CP100137.1 RefSeq gene 312440 313429 . - . ID=gene-NIV78_RS18545;Name=NIV78_RS18545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18545 NZ_CP100137.1 Protein Homology CDS 312440 313429 . - 0 ID=cds-WP_017922801.1;Parent=gene-NIV78_RS18545;Dbxref=Genbank:WP_017922801.1;Name=WP_017922801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878006.1;locus_tag=NIV78_RS18545;product=nitronate monooxygenase family protein;protein_id=WP_017922801.1;transl_table=11 NZ_CP100137.1 RefSeq gene 313453 313857 . - . ID=gene-NIV78_RS18550;Name=NIV78_RS18550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18550 NZ_CP100137.1 Protein Homology CDS 313453 313857 . - 0 ID=cds-WP_015878005.1;Parent=gene-NIV78_RS18550;Dbxref=Genbank:WP_015878005.1;Name=WP_015878005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878005.1;locus_tag=NIV78_RS18550;product=thioesterase;protein_id=WP_015878005.1;transl_table=11 NZ_CP100137.1 RefSeq gene 313894 315045 . - . ID=gene-NIV78_RS18555;Name=NIV78_RS18555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18555 NZ_CP100137.1 Protein Homology CDS 313894 315045 . - 0 ID=cds-WP_257757769.1;Parent=gene-NIV78_RS18555;Dbxref=Genbank:WP_257757769.1;Name=WP_257757769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878004.1;locus_tag=NIV78_RS18555;product=acyl-CoA dehydrogenase family protein;protein_id=WP_257757769.1;transl_table=11 NZ_CP100137.1 RefSeq gene 315363 317552 . - . ID=gene-NIV78_RS18560;Name=NIV78_RS18560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18560 NZ_CP100137.1 Protein Homology CDS 315363 317552 . - 0 ID=cds-WP_017424193.1;Parent=gene-NIV78_RS18560;Dbxref=Genbank:WP_017424193.1;Name=WP_017424193.1;Ontology_term=GO:0004629;gbkey=CDS;go_function=phospholipase C activity|0004629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424193.1;locus_tag=NIV78_RS18560;product=phospholipase C%2C phosphocholine-specific;protein_id=WP_017424193.1;transl_table=11 NZ_CP100137.1 RefSeq gene 317633 318043 . - . ID=gene-NIV78_RS18565;Name=NIV78_RS18565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18565 NZ_CP100137.1 GeneMarkS-2+ CDS 317633 318043 . - 0 ID=cds-WP_020379726.1;Parent=gene-NIV78_RS18565;Dbxref=Genbank:WP_020379726.1;Name=WP_020379726.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS18565;product=hypothetical protein;protein_id=WP_020379726.1;transl_table=11 NZ_CP100137.1 RefSeq gene 318640 319230 . - . ID=gene-NIV78_RS18570;Name=NIV78_RS18570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18570 NZ_CP100137.1 Protein Homology CDS 318640 319230 . - 0 ID=cds-WP_251107925.1;Parent=gene-NIV78_RS18570;Dbxref=Genbank:WP_251107925.1;Name=WP_251107925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424196.1;locus_tag=NIV78_RS18570;product=dimethylsulfonioproprionate lyase family protein;protein_id=WP_251107925.1;transl_table=11 NZ_CP100137.1 RefSeq gene 319867 321780 . + . ID=gene-NIV78_RS18575;Name=NIV78_RS18575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18575 NZ_CP100137.1 Protein Homology CDS 319867 321780 . + 0 ID=cds-WP_039203177.1;Parent=gene-NIV78_RS18575;Dbxref=Genbank:WP_039203177.1;Name=WP_039203177.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878001.1;locus_tag=NIV78_RS18575;product=methyl-accepting chemotaxis protein;protein_id=WP_039203177.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 321926 323355 . + . ID=gene-NIV78_RS18580;Name=NIV78_RS18580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS18580;pseudo=true NZ_CP100137.1 Protein Homology CDS 321926 323355 . + 0 ID=cds-NIV78_RS18580;Parent=gene-NIV78_RS18580;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013731.2;locus_tag=NIV78_RS18580;product=chemotaxis protein CheW;pseudo=true;transl_table=11 NZ_CP100137.1 RefSeq gene 323352 324401 . + . ID=gene-NIV78_RS18585;Name=cheB;gbkey=Gene;gene=cheB;gene_biotype=protein_coding;locus_tag=NIV78_RS18585 NZ_CP100137.1 Protein Homology CDS 323352 324401 . + 0 ID=cds-WP_017922798.1;Parent=gene-NIV78_RS18585;Dbxref=Genbank:WP_017922798.1;Name=WP_017922798.1;Ontology_term=GO:0000160,GO:0006935,GO:0000156,GO:0008984;gbkey=CDS;gene=cheB;go_function=phosphorelay response regulator activity|0000156||IEA,protein-glutamate methylesterase activity|0008984||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877999.1;locus_tag=NIV78_RS18585;product=chemotaxis-specific protein-glutamate methyltransferase CheB;protein_id=WP_017922798.1;transl_table=11 NZ_CP100137.1 RefSeq gene 324415 325023 . + . ID=gene-NIV78_RS18590;Name=NIV78_RS18590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18590 NZ_CP100137.1 Protein Homology CDS 324415 325023 . + 0 ID=cds-WP_015877998.1;Parent=gene-NIV78_RS18590;Dbxref=Genbank:WP_015877998.1;Name=WP_015877998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877998.1;locus_tag=NIV78_RS18590;product=HEAT repeat domain-containing protein;protein_id=WP_015877998.1;transl_table=11 NZ_CP100137.1 RefSeq gene 325016 325864 . + . ID=gene-NIV78_RS18595;Name=NIV78_RS18595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18595 NZ_CP100137.1 Protein Homology CDS 325016 325864 . + 0 ID=cds-WP_015877997.1;Parent=gene-NIV78_RS18595;Dbxref=Genbank:WP_015877997.1;Name=WP_015877997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877997.1;locus_tag=NIV78_RS18595;product=protein-glutamate O-methyltransferase CheR;protein_id=WP_015877997.1;transl_table=11 NZ_CP100137.1 RefSeq gene 325861 326232 . + . ID=gene-NIV78_RS18600;Name=NIV78_RS18600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18600 NZ_CP100137.1 Protein Homology CDS 325861 326232 . + 0 ID=cds-WP_257757771.1;Parent=gene-NIV78_RS18600;Dbxref=Genbank:WP_257757771.1;Name=WP_257757771.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877996.1;locus_tag=NIV78_RS18600;product=response regulator;protein_id=WP_257757771.1;transl_table=11 NZ_CP100137.1 RefSeq gene 326229 328856 . + . ID=gene-NIV78_RS18605;Name=NIV78_RS18605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18605 NZ_CP100137.1 Protein Homology CDS 326229 328856 . + 0 ID=cds-WP_251107737.1;Parent=gene-NIV78_RS18605;Dbxref=Genbank:WP_251107737.1;Name=WP_251107737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877995.1;locus_tag=NIV78_RS18605;product=Hpt domain-containing protein;protein_id=WP_251107737.1;transl_table=11 NZ_CP100137.1 RefSeq gene 328856 329092 . + . ID=gene-NIV78_RS18610;Name=NIV78_RS18610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18610 NZ_CP100137.1 Protein Homology CDS 328856 329092 . + 0 ID=cds-WP_015877994.1;Parent=gene-NIV78_RS18610;Dbxref=Genbank:WP_015877994.1;Name=WP_015877994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877994.1;locus_tag=NIV78_RS18610;product=hypothetical protein;protein_id=WP_015877994.1;transl_table=11 NZ_CP100137.1 RefSeq gene 329119 329496 . + . ID=gene-NIV78_RS18615;Name=NIV78_RS18615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18615 NZ_CP100137.1 Protein Homology CDS 329119 329496 . + 0 ID=cds-WP_015877993.1;Parent=gene-NIV78_RS18615;Dbxref=Genbank:WP_015877993.1;Name=WP_015877993.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877993.1;locus_tag=NIV78_RS18615;product=response regulator;protein_id=WP_015877993.1;transl_table=11 NZ_CP100137.1 RefSeq gene 329832 330662 . + . ID=gene-NIV78_RS18620;Name=NIV78_RS18620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18620 NZ_CP100137.1 Protein Homology CDS 329832 330662 . + 0 ID=cds-WP_255220133.1;Parent=gene-NIV78_RS18620;Dbxref=Genbank:WP_255220133.1;Name=WP_255220133.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF012245.2;locus_tag=NIV78_RS18620;product=methyl-accepting chemotaxis protein;protein_id=WP_255220133.1;transl_table=11 NZ_CP100137.1 RefSeq gene 331244 332398 . + . ID=gene-NIV78_RS18625;Name=NIV78_RS18625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18625 NZ_CP100137.1 Protein Homology CDS 331244 332398 . + 0 ID=cds-WP_257757772.1;Parent=gene-NIV78_RS18625;Dbxref=Genbank:WP_257757772.1;Name=WP_257757772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198207.1;locus_tag=NIV78_RS18625;product=flagellin;protein_id=WP_257757772.1;transl_table=11 NZ_CP100137.1 RefSeq gene 333302 335260 . + . ID=gene-NIV78_RS18630;Name=NIV78_RS18630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18630 NZ_CP100137.1 Protein Homology CDS 333302 335260 . + 0 ID=cds-WP_017923701.1;Parent=gene-NIV78_RS18630;Dbxref=Genbank:WP_017923701.1;Name=WP_017923701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877990.1;locus_tag=NIV78_RS18630;product=S53 family peptidase;protein_id=WP_017923701.1;transl_table=11 NZ_CP100137.1 RefSeq gene 335580 336407 . - . ID=gene-NIV78_RS18635;Name=NIV78_RS18635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18635 NZ_CP100137.1 Protein Homology CDS 335580 336407 . - 0 ID=cds-WP_015877989.1;Parent=gene-NIV78_RS18635;Dbxref=Genbank:WP_015877989.1;Name=WP_015877989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498538.1;locus_tag=NIV78_RS18635;product=hypothetical protein;protein_id=WP_015877989.1;transl_table=11 NZ_CP100137.1 RefSeq gene 336531 337118 . - . ID=gene-NIV78_RS18640;Name=NIV78_RS18640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18640 NZ_CP100137.1 Protein Homology CDS 336531 337118 . - 0 ID=cds-WP_015877988.1;Parent=gene-NIV78_RS18640;Dbxref=Genbank:WP_015877988.1;Name=WP_015877988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479894.1;locus_tag=NIV78_RS18640;product=SEL1-like repeat protein;protein_id=WP_015877988.1;transl_table=11 NZ_CP100137.1 RefSeq gene 337476 338348 . + . ID=gene-NIV78_RS18645;Name=NIV78_RS18645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18645 NZ_CP100137.1 Protein Homology CDS 337476 338348 . + 0 ID=cds-WP_043228838.1;Parent=gene-NIV78_RS18645;Dbxref=Genbank:WP_043228838.1;Name=WP_043228838.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733949.1;locus_tag=NIV78_RS18645;product=helix-turn-helix domain-containing protein;protein_id=WP_043228838.1;transl_table=11 NZ_CP100137.1 RefSeq gene 338912 339547 . - . ID=gene-NIV78_RS18650;Name=NIV78_RS18650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18650 NZ_CP100137.1 Protein Homology CDS 338912 339547 . - 0 ID=cds-WP_015877986.1;Parent=gene-NIV78_RS18650;Dbxref=Genbank:WP_015877986.1;Name=WP_015877986.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877986.1;locus_tag=NIV78_RS18650;product=glutathione S-transferase N-terminal domain-containing protein;protein_id=WP_015877986.1;transl_table=11 NZ_CP100137.1 RefSeq gene 339712 339993 . + . ID=gene-NIV78_RS18655;Name=NIV78_RS18655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18655 NZ_CP100137.1 Protein Homology CDS 339712 339993 . + 0 ID=cds-WP_157384085.1;Parent=gene-NIV78_RS18655;Dbxref=Genbank:WP_157384085.1;Name=WP_157384085.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012759.2;locus_tag=NIV78_RS18655;product=acyl carrier protein;protein_id=WP_157384085.1;transl_table=11 NZ_CP100137.1 RefSeq gene 340040 340555 . + . ID=gene-NIV78_RS18660;Name=NIV78_RS18660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18660 NZ_CP100137.1 Protein Homology CDS 340040 340555 . + 0 ID=cds-WP_017424771.1;Parent=gene-NIV78_RS18660;Dbxref=Genbank:WP_017424771.1;Name=WP_017424771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877985.1;locus_tag=NIV78_RS18660;product=gamma-glutamylcyclotransferase;protein_id=WP_017424771.1;transl_table=11 NZ_CP100137.1 RefSeq gene 341053 342345 . + . ID=gene-NIV78_RS18665;Name=NIV78_RS18665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18665 NZ_CP100137.1 Protein Homology CDS 341053 342345 . + 0 ID=cds-WP_017922685.1;Parent=gene-NIV78_RS18665;Dbxref=Genbank:WP_017922685.1;Name=WP_017922685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424772.1;locus_tag=NIV78_RS18665;product=MFS transporter;protein_id=WP_017922685.1;transl_table=11 NZ_CP100137.1 RefSeq gene 342386 342910 . + . ID=gene-NIV78_RS18670;Name=NIV78_RS18670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18670 NZ_CP100137.1 Protein Homology CDS 342386 342910 . + 0 ID=cds-WP_015877983.1;Parent=gene-NIV78_RS18670;Dbxref=Genbank:WP_015877983.1;Name=WP_015877983.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877983.1;locus_tag=NIV78_RS18670;product=flavin reductase;protein_id=WP_015877983.1;transl_table=11 NZ_CP100137.1 RefSeq gene 342937 344007 . + . ID=gene-NIV78_RS18675;Name=NIV78_RS18675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18675 NZ_CP100137.1 Protein Homology CDS 342937 344007 . + 0 ID=cds-WP_241766794.1;Parent=gene-NIV78_RS18675;Dbxref=Genbank:WP_241766794.1;Name=WP_241766794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877982.1;locus_tag=NIV78_RS18675;product=DUF6421 family protein;protein_id=WP_241766794.1;transl_table=11 NZ_CP100137.1 RefSeq gene 344053 345894 . + . ID=gene-NIV78_RS18680;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=NIV78_RS18680 NZ_CP100137.1 Protein Homology CDS 344053 345894 . + 0 ID=cds-WP_017922687.1;Parent=gene-NIV78_RS18680;Dbxref=Genbank:WP_017922687.1;Name=WP_017922687.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877981.1;locus_tag=NIV78_RS18680;product=dihydroxy-acid dehydratase;protein_id=WP_017922687.1;transl_table=11 NZ_CP100137.1 RefSeq gene 345897 347087 . + . ID=gene-NIV78_RS18685;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=NIV78_RS18685 NZ_CP100137.1 Protein Homology CDS 345897 347087 . + 0 ID=cds-WP_015877980.1;Parent=gene-NIV78_RS18685;Dbxref=Genbank:WP_015877980.1;Name=WP_015877980.1;Ontology_term=GO:0009086,GO:0004121;gbkey=CDS;gene=metC;go_function=cystathionine beta-lyase activity|0004121||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877980.1;locus_tag=NIV78_RS18685;product=cystathionine beta-lyase;protein_id=WP_015877980.1;transl_table=11 NZ_CP100137.1 RefSeq gene 347147 348463 . + . ID=gene-NIV78_RS18690;Name=NIV78_RS18690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18690 NZ_CP100137.1 Protein Homology CDS 347147 348463 . + 0 ID=cds-WP_015877979.1;Parent=gene-NIV78_RS18690;Dbxref=Genbank:WP_015877979.1;Name=WP_015877979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877979.1;locus_tag=NIV78_RS18690;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_015877979.1;transl_table=11 NZ_CP100137.1 RefSeq gene 348530 350194 . + . ID=gene-NIV78_RS18695;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=NIV78_RS18695 NZ_CP100137.1 Protein Homology CDS 348530 350194 . + 0 ID=cds-WP_017922688.1;Parent=gene-NIV78_RS18695;Dbxref=Genbank:WP_017922688.1;Name=WP_017922688.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877978.1;locus_tag=NIV78_RS18695;product=glutamate--cysteine ligase;protein_id=WP_017922688.1;transl_table=11 NZ_CP100137.1 RefSeq gene 350191 351381 . + . ID=gene-NIV78_RS18700;Name=NIV78_RS18700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18700 NZ_CP100137.1 Protein Homology CDS 350191 351381 . + 0 ID=cds-WP_015877977.1;Parent=gene-NIV78_RS18700;Dbxref=Genbank:WP_015877977.1;Name=WP_015877977.1;Ontology_term=GO:0042919,GO:0042925,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=benzoate transmembrane transporter activity|0042925||IEA;go_process=benzoate transport|0042919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877977.1;locus_tag=NIV78_RS18700;product=benzoate/H(+) symporter BenE family transporter;protein_id=WP_015877977.1;transl_table=11 NZ_CP100137.1 RefSeq gene 351444 352604 . + . ID=gene-NIV78_RS18705;Name=NIV78_RS18705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18705 NZ_CP100137.1 Protein Homology CDS 351444 352604 . + 0 ID=cds-WP_017424846.1;Parent=gene-NIV78_RS18705;Dbxref=Genbank:WP_017424846.1;Name=WP_017424846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424846.1;locus_tag=NIV78_RS18705;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WP_017424846.1;transl_table=11 NZ_CP100137.1 RefSeq gene 352749 353660 . - . ID=gene-NIV78_RS18710;Name=NIV78_RS18710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18710 NZ_CP100137.1 Protein Homology CDS 352749 353660 . - 0 ID=cds-WP_015877975.1;Parent=gene-NIV78_RS18710;Dbxref=Genbank:WP_015877975.1;Name=WP_015877975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877975.1;locus_tag=NIV78_RS18710;product=LysR family transcriptional regulator;protein_id=WP_015877975.1;transl_table=11 NZ_CP100137.1 RefSeq gene 354271 354828 . + . ID=gene-NIV78_RS18715;Name=NIV78_RS18715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18715 NZ_CP100137.1 Protein Homology CDS 354271 354828 . + 0 ID=cds-WP_015877974.1;Parent=gene-NIV78_RS18715;Dbxref=Genbank:WP_015877974.1;Name=WP_015877974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424848.1;locus_tag=NIV78_RS18715;product=GNAT family N-acetyltransferase;protein_id=WP_015877974.1;transl_table=11 NZ_CP100137.1 RefSeq gene 355346 356500 . + . ID=gene-NIV78_RS18720;Name=NIV78_RS18720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18720 NZ_CP100137.1 Protein Homology CDS 355346 356500 . + 0 ID=cds-WP_015877973.1;Parent=gene-NIV78_RS18720;Dbxref=Genbank:WP_015877973.1;Name=WP_015877973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198207.1;locus_tag=NIV78_RS18720;product=flagellin;protein_id=WP_015877973.1;transl_table=11 NZ_CP100137.1 RefSeq gene 356763 357371 . + . ID=gene-NIV78_RS18725;Name=NIV78_RS18725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18725 NZ_CP100137.1 Protein Homology CDS 356763 357371 . + 0 ID=cds-WP_017923753.1;Parent=gene-NIV78_RS18725;Dbxref=Genbank:WP_017923753.1;Name=WP_017923753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877972.1;locus_tag=NIV78_RS18725;product=alpha/beta fold hydrolase;protein_id=WP_017923753.1;transl_table=11 NZ_CP100137.1 RefSeq gene 357629 359725 . + . ID=gene-NIV78_RS18730;Name=NIV78_RS18730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18730 NZ_CP100137.1 Protein Homology CDS 357629 359725 . + 0 ID=cds-WP_015877971.1;Parent=gene-NIV78_RS18730;Dbxref=Genbank:WP_015877971.1;Name=WP_015877971.1;Ontology_term=GO:0004096,GO:0020037;gbkey=CDS;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877971.1;locus_tag=NIV78_RS18730;product=catalase;protein_id=WP_015877971.1;transl_table=11 NZ_CP100137.1 RefSeq gene 359830 361032 . - . ID=gene-NIV78_RS18735;Name=NIV78_RS18735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18735 NZ_CP100137.1 Protein Homology CDS 359830 361032 . - 0 ID=cds-WP_251107740.1;Parent=gene-NIV78_RS18735;Dbxref=Genbank:WP_251107740.1;Name=WP_251107740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750628.1;locus_tag=NIV78_RS18735;product=enoyl-[acyl-carrier-protein] reductase FabV;protein_id=WP_251107740.1;transl_table=11 NZ_CP100137.1 RefSeq gene 361239 361952 . - . ID=gene-NIV78_RS18740;Name=NIV78_RS18740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18740 NZ_CP100137.1 Protein Homology CDS 361239 361952 . - 0 ID=cds-WP_015877969.1;Parent=gene-NIV78_RS18740;Dbxref=Genbank:WP_015877969.1;Name=WP_015877969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020227585.1;locus_tag=NIV78_RS18740;product=FMN-binding negative transcriptional regulator;protein_id=WP_015877969.1;transl_table=11 NZ_CP100137.1 RefSeq gene 362066 363718 . + . ID=gene-NIV78_RS18745;Name=NIV78_RS18745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18745 NZ_CP100137.1 Protein Homology CDS 362066 363718 . + 0 ID=cds-WP_251107741.1;Parent=gene-NIV78_RS18745;Dbxref=Genbank:WP_251107741.1;Name=WP_251107741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877968.1;locus_tag=NIV78_RS18745;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_251107741.1;transl_table=11 NZ_CP100137.1 RefSeq gene 363870 364502 . - . ID=gene-NIV78_RS18750;Name=NIV78_RS18750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18750 NZ_CP100137.1 Protein Homology CDS 363870 364502 . - 0 ID=cds-WP_015877967.1;Parent=gene-NIV78_RS18750;Dbxref=Genbank:WP_015877967.1;Name=WP_015877967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008923210.1;locus_tag=NIV78_RS18750;product=trimeric intracellular cation channel family protein;protein_id=WP_015877967.1;transl_table=11 NZ_CP100137.1 RefSeq gene 364849 365805 . - . ID=gene-NIV78_RS18755;Name=NIV78_RS18755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18755 NZ_CP100137.1 Protein Homology CDS 364849 365805 . - 0 ID=cds-WP_251107742.1;Parent=gene-NIV78_RS18755;Dbxref=Genbank:WP_251107742.1;Name=WP_251107742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877966.1;locus_tag=NIV78_RS18755;product=helix-turn-helix domain-containing protein;protein_id=WP_251107742.1;transl_table=11 NZ_CP100137.1 RefSeq gene 365960 366859 . + . ID=gene-NIV78_RS18760;Name=NIV78_RS18760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18760 NZ_CP100137.1 Protein Homology CDS 365960 366859 . + 0 ID=cds-WP_017922695.1;Parent=gene-NIV78_RS18760;Dbxref=Genbank:WP_017922695.1;Name=WP_017922695.1;Ontology_term=GO:0016020,GO:0016021;gbkey=CDS;go_component=membrane|0016020||IEA,integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877965.1;locus_tag=NIV78_RS18760;product=EamA family transporter;protein_id=WP_017922695.1;transl_table=11 NZ_CP100137.1 RefSeq gene 367292 367444 . + . ID=gene-NIV78_RS18765;Name=NIV78_RS18765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18765 NZ_CP100137.1 Protein Homology CDS 367292 367444 . + 0 ID=cds-WP_017423774.1;Parent=gene-NIV78_RS18765;Dbxref=Genbank:WP_017423774.1;Name=WP_017423774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423774.1;locus_tag=NIV78_RS18765;product=hypothetical protein;protein_id=WP_017423774.1;transl_table=11 NZ_CP100137.1 RefSeq gene 367804 368295 . + . ID=gene-NIV78_RS18770;Name=NIV78_RS18770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18770 NZ_CP100137.1 GeneMarkS-2+ CDS 367804 368295 . + 0 ID=cds-WP_026051465.1;Parent=gene-NIV78_RS18770;Dbxref=Genbank:WP_026051465.1;Name=WP_026051465.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS18770;product=hypothetical protein;protein_id=WP_026051465.1;transl_table=11 NZ_CP100137.1 RefSeq gene 368768 369880 . - . ID=gene-NIV78_RS18775;Name=NIV78_RS18775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18775 NZ_CP100137.1 Protein Homology CDS 368768 369880 . - 0 ID=cds-WP_157384086.1;Parent=gene-NIV78_RS18775;Dbxref=Genbank:WP_157384086.1;Name=WP_157384086.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF018485.2;locus_tag=NIV78_RS18775;product=MFS transporter;protein_id=WP_157384086.1;transl_table=11 NZ_CP100137.1 RefSeq gene 369879 370148 . + . ID=gene-NIV78_RS18780;Name=NIV78_RS18780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18780 NZ_CP100137.1 GeneMarkS-2+ CDS 369879 370148 . + 0 ID=cds-WP_157384087.1;Parent=gene-NIV78_RS18780;Dbxref=Genbank:WP_157384087.1;Name=WP_157384087.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS18780;product=hypothetical protein;protein_id=WP_157384087.1;transl_table=11 NZ_CP100137.1 RefSeq gene 370123 371124 . - . ID=gene-NIV78_RS18785;Name=sbnB;gbkey=Gene;gene=sbnB;gene_biotype=protein_coding;locus_tag=NIV78_RS18785 NZ_CP100137.1 Protein Homology CDS 370123 371124 . - 0 ID=cds-WP_017423772.1;Parent=gene-NIV78_RS18785;Dbxref=Genbank:WP_017423772.1;Name=WP_017423772.1;Ontology_term=GO:0009058,GO:0016491;gbkey=CDS;gene=sbnB;go_function=oxidoreductase activity|0016491||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423772.1;locus_tag=NIV78_RS18785;product=2%2C3-diaminopropionate biosynthesis protein SbnB;protein_id=WP_017423772.1;transl_table=11 NZ_CP100137.1 RefSeq gene 371223 372230 . - . ID=gene-NIV78_RS18790;Name=sbnA;gbkey=Gene;gene=sbnA;gene_biotype=protein_coding;locus_tag=NIV78_RS18790 NZ_CP100137.1 Protein Homology CDS 371223 372230 . - 0 ID=cds-WP_017922696.1;Parent=gene-NIV78_RS18790;Dbxref=Genbank:WP_017922696.1;Name=WP_017922696.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;gene=sbnA;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423771.1;locus_tag=NIV78_RS18790;product=2%2C3-diaminopropionate biosynthesis protein SbnA;protein_id=WP_017922696.1;transl_table=11 NZ_CP100137.1 RefSeq gene 372220 373467 . - . ID=gene-NIV78_RS18795;Name=NIV78_RS18795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18795 NZ_CP100137.1 Protein Homology CDS 372220 373467 . - 0 ID=cds-WP_198513128.1;Parent=gene-NIV78_RS18795;Dbxref=Genbank:WP_198513128.1;Name=WP_198513128.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018004.2;locus_tag=NIV78_RS18795;product=DUF1015 family protein;protein_id=WP_198513128.1;transl_table=11 NZ_CP100137.1 RefSeq gene 373489 374757 . - . ID=gene-NIV78_RS18800;Name=NIV78_RS18800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18800 NZ_CP100137.1 Protein Homology CDS 373489 374757 . - 0 ID=cds-WP_251107743.1;Parent=gene-NIV78_RS18800;Dbxref=Genbank:WP_251107743.1;Name=WP_251107743.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019121.2;locus_tag=NIV78_RS18800;product=ATP-grasp domain-containing protein;protein_id=WP_251107743.1;transl_table=11 NZ_CP100137.1 RefSeq gene 374795 375799 . - . ID=gene-NIV78_RS18805;Name=NIV78_RS18805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18805 NZ_CP100137.1 Protein Homology CDS 374795 375799 . - 0 ID=cds-WP_017423769.1;Parent=gene-NIV78_RS18805;Dbxref=Genbank:WP_017423769.1;Name=WP_017423769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423769.1;locus_tag=NIV78_RS18805;product=aspartyl/asparaginyl beta-hydroxylase domain-containing protein;protein_id=WP_017423769.1;transl_table=11 NZ_CP100137.1 RefSeq gene 375830 377632 . - . ID=gene-NIV78_RS18810;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=NIV78_RS18810 NZ_CP100137.1 Protein Homology CDS 375830 377632 . - 0 ID=cds-WP_080630153.1;Parent=gene-NIV78_RS18810;Dbxref=Genbank:WP_080630153.1;Name=WP_080630153.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423768.1;locus_tag=NIV78_RS18810;product=asparagine synthase (glutamine-hydrolyzing);protein_id=WP_080630153.1;transl_table=11 NZ_CP100137.1 RefSeq gene 377636 378781 . - . ID=gene-NIV78_RS18815;Name=NIV78_RS18815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18815 NZ_CP100137.1 GeneMarkS-2+ CDS 377636 378781 . - 0 ID=cds-WP_251107744.1;Parent=gene-NIV78_RS18815;Dbxref=Genbank:WP_251107744.1;Name=WP_251107744.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS18815;product=hypothetical protein;protein_id=WP_251107744.1;transl_table=11 NZ_CP100137.1 RefSeq gene 378946 379269 . + . ID=gene-NIV78_RS18820;Name=NIV78_RS18820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18820 NZ_CP100137.1 GeneMarkS-2+ CDS 378946 379269 . + 0 ID=cds-WP_159372703.1;Parent=gene-NIV78_RS18820;Dbxref=Genbank:WP_159372703.1;Name=WP_159372703.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS18820;product=hypothetical protein;protein_id=WP_159372703.1;transl_table=11 NZ_CP100137.1 RefSeq gene 379755 380651 . - . ID=gene-NIV78_RS18825;Name=NIV78_RS18825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18825 NZ_CP100137.1 Protein Homology CDS 379755 380651 . - 0 ID=cds-WP_043225136.1;Parent=gene-NIV78_RS18825;Dbxref=Genbank:WP_043225136.1;Name=WP_043225136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423765.1;locus_tag=NIV78_RS18825;product=LysR substrate-binding domain-containing protein;protein_id=WP_043225136.1;transl_table=11 NZ_CP100137.1 RefSeq gene 380774 381637 . + . ID=gene-NIV78_RS18830;Name=NIV78_RS18830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18830 NZ_CP100137.1 Protein Homology CDS 380774 381637 . + 0 ID=cds-WP_015877963.1;Parent=gene-NIV78_RS18830;Dbxref=Genbank:WP_015877963.1;Name=WP_015877963.1;Ontology_term=GO:0019700,GO:0050194;gbkey=CDS;go_function=phosphonoacetaldehyde hydrolase activity|0050194||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691467.1;locus_tag=NIV78_RS18830;product=phosphonoacetaldehyde hydrolase;protein_id=WP_015877963.1;transl_table=11 NZ_CP100137.1 RefSeq gene 381851 383143 . - . ID=gene-NIV78_RS18835;Name=NIV78_RS18835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18835 NZ_CP100137.1 Protein Homology CDS 381851 383143 . - 0 ID=cds-WP_043227260.1;Parent=gene-NIV78_RS18835;Dbxref=Genbank:WP_043227260.1;Name=WP_043227260.1;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423764.1;locus_tag=NIV78_RS18835;product=cystathionine gamma-synthase family protein;protein_id=WP_043227260.1;transl_table=11 NZ_CP100137.1 RefSeq gene 383321 383803 . + . ID=gene-NIV78_RS18840;Name=NIV78_RS18840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18840 NZ_CP100137.1 Protein Homology CDS 383321 383803 . + 0 ID=cds-WP_015877961.1;Parent=gene-NIV78_RS18840;Dbxref=Genbank:WP_015877961.1;Name=WP_015877961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877961.1;locus_tag=NIV78_RS18840;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_015877961.1;transl_table=11 NZ_CP100137.1 RefSeq gene 383889 384485 . - . ID=gene-NIV78_RS18845;Name=NIV78_RS18845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18845 NZ_CP100137.1 Protein Homology CDS 383889 384485 . - 0 ID=cds-WP_017924190.1;Parent=gene-NIV78_RS18845;Dbxref=Genbank:WP_017924190.1;Name=WP_017924190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877960.1;locus_tag=NIV78_RS18845;product=histidine phosphatase family protein;protein_id=WP_017924190.1;transl_table=11 NZ_CP100137.1 RefSeq gene 384668 386239 . - . ID=gene-NIV78_RS18850;Name=NIV78_RS18850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18850 NZ_CP100137.1 Protein Homology CDS 384668 386239 . - 0 ID=cds-WP_015877959.1;Parent=gene-NIV78_RS18850;Dbxref=Genbank:WP_015877959.1;Name=WP_015877959.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877959.1;locus_tag=NIV78_RS18850;product=methyl-accepting chemotaxis protein;protein_id=WP_015877959.1;transl_table=11 NZ_CP100137.1 RefSeq gene 386413 387057 . - . ID=gene-NIV78_RS18855;Name=NIV78_RS18855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18855 NZ_CP100137.1 Protein Homology CDS 386413 387057 . - 0 ID=cds-WP_015877958.1;Parent=gene-NIV78_RS18855;Dbxref=Genbank:WP_015877958.1;Name=WP_015877958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877958.1;locus_tag=NIV78_RS18855;product=response regulator transcription factor;protein_id=WP_015877958.1;transl_table=11 NZ_CP100137.1 RefSeq gene 387713 388867 . + . ID=gene-NIV78_RS18860;Name=NIV78_RS18860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18860 NZ_CP100137.1 Protein Homology CDS 387713 388867 . + 0 ID=cds-WP_015877957.1;Parent=gene-NIV78_RS18860;Dbxref=Genbank:WP_015877957.1;Name=WP_015877957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877957.1;locus_tag=NIV78_RS18860;product=EAL domain-containing protein;protein_id=WP_015877957.1;transl_table=11 NZ_CP100137.1 RefSeq gene 389104 390222 . + . ID=gene-NIV78_RS18865;Name=NIV78_RS18865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18865 NZ_CP100137.1 Protein Homology CDS 389104 390222 . + 0 ID=cds-WP_015877956.1;Parent=gene-NIV78_RS18865;Dbxref=Genbank:WP_015877956.1;Name=WP_015877956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877956.1;locus_tag=NIV78_RS18865;product=GAF domain-containing protein;protein_id=WP_015877956.1;transl_table=11 NZ_CP100137.1 RefSeq gene 390426 391835 . - . ID=gene-NIV78_RS18870;Name=NIV78_RS18870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18870 NZ_CP100137.1 Protein Homology CDS 390426 391835 . - 0 ID=cds-WP_230674483.1;Parent=gene-NIV78_RS18870;Dbxref=Genbank:WP_230674483.1;Name=WP_230674483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877955.1;locus_tag=NIV78_RS18870;product=helix-turn-helix domain-containing protein;protein_id=WP_230674483.1;transl_table=11 NZ_CP100137.1 RefSeq gene 391825 392133 . - . ID=gene-NIV78_RS18875;Name=NIV78_RS18875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18875 NZ_CP100137.1 GeneMarkS-2+ CDS 391825 392133 . - 0 ID=cds-WP_162486897.1;Parent=gene-NIV78_RS18875;Dbxref=Genbank:WP_162486897.1;Name=WP_162486897.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS18875;product=hypothetical protein;protein_id=WP_162486897.1;transl_table=11 NZ_CP100137.1 RefSeq gene 392203 392460 . - . ID=gene-NIV78_RS18880;Name=NIV78_RS18880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18880 NZ_CP100137.1 Protein Homology CDS 392203 392460 . - 0 ID=cds-WP_015877954.1;Parent=gene-NIV78_RS18880;Dbxref=Genbank:WP_015877954.1;Name=WP_015877954.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013014.2;locus_tag=NIV78_RS18880;product=H-NS histone family protein;protein_id=WP_015877954.1;transl_table=11 NZ_CP100137.1 RefSeq gene 392552 392815 . - . ID=gene-NIV78_RS18885;Name=NIV78_RS18885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18885 NZ_CP100137.1 GeneMarkS-2+ CDS 392552 392815 . - 0 ID=cds-WP_124837265.1;Parent=gene-NIV78_RS18885;Dbxref=Genbank:WP_124837265.1;Name=WP_124837265.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS18885;product=hypothetical protein;protein_id=WP_124837265.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 393160 393446 . - . ID=gene-NIV78_RS18890;Name=NIV78_RS18890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS18890;partial=true;pseudo=true;start_range=.,393160 NZ_CP100137.1 Protein Homology CDS 393160 393446 . - 0 ID=cds-NIV78_RS18890;Parent=gene-NIV78_RS18890;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011084489.1;locus_tag=NIV78_RS18890;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,393160;transl_table=11 NZ_CP100137.1 RefSeq gene 393623 394123 . - . ID=gene-NIV78_RS18895;Name=NIV78_RS18895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18895 NZ_CP100137.1 Protein Homology CDS 393623 394123 . - 0 ID=cds-WP_102952623.1;Parent=gene-NIV78_RS18895;Dbxref=Genbank:WP_102952623.1;Name=WP_102952623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020749951.1;locus_tag=NIV78_RS18895;product=hypothetical protein;protein_id=WP_102952623.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 394249 394940 . - . ID=gene-NIV78_RS18900;Name=NIV78_RS18900;end_range=394940,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS18900;partial=true;pseudo=true NZ_CP100137.1 Protein Homology CDS 394249 394940 . - 0 ID=cds-NIV78_RS18900;Parent=gene-NIV78_RS18900;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=394940,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013596957.1;locus_tag=NIV78_RS18900;partial=true;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP100137.1 RefSeq gene 395326 396345 . - . ID=gene-NIV78_RS18905;Name=NIV78_RS18905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18905 NZ_CP100137.1 Protein Homology CDS 395326 396345 . - 0 ID=cds-WP_017922630.1;Parent=gene-NIV78_RS18905;Dbxref=Genbank:WP_017922630.1;Name=WP_017922630.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877951.1;locus_tag=NIV78_RS18905;product=TauD/TfdA family dioxygenase;protein_id=WP_017922630.1;transl_table=11 NZ_CP100137.1 RefSeq gene 396462 397832 . - . ID=gene-NIV78_RS18910;Name=NIV78_RS18910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18910 NZ_CP100137.1 Protein Homology CDS 396462 397832 . - 0 ID=cds-WP_015877950.1;Parent=gene-NIV78_RS18910;Dbxref=Genbank:WP_015877950.1;Name=WP_015877950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877950.1;locus_tag=NIV78_RS18910;product=LeuA family protein;protein_id=WP_015877950.1;transl_table=11 NZ_CP100137.1 RefSeq gene 397939 398739 . - . ID=gene-NIV78_RS18915;Name=NIV78_RS18915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18915 NZ_CP100137.1 Protein Homology CDS 397939 398739 . - 0 ID=cds-WP_015877949.1;Parent=gene-NIV78_RS18915;Dbxref=Genbank:WP_015877949.1;Name=WP_015877949.1;Ontology_term=GO:0008610,GO:0005506,GO:0016491;gbkey=CDS;go_function=iron ion binding|0005506||IEA,oxidoreductase activity|0016491||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877949.1;locus_tag=NIV78_RS18915;product=sterol desaturase family protein;protein_id=WP_015877949.1;transl_table=11 NZ_CP100137.1 RefSeq gene 399360 400181 . + . ID=gene-NIV78_RS18920;Name=NIV78_RS18920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18920 NZ_CP100137.1 Protein Homology CDS 399360 400181 . + 0 ID=cds-WP_015877948.1;Parent=gene-NIV78_RS18920;Dbxref=Genbank:WP_015877948.1;Name=WP_015877948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877948.1;locus_tag=NIV78_RS18920;product=LuxR family transcriptional regulator;protein_id=WP_015877948.1;transl_table=11 NZ_CP100137.1 RefSeq gene 400342 401757 . + . ID=gene-NIV78_RS18925;Name=NIV78_RS18925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18925 NZ_CP100137.1 Protein Homology CDS 400342 401757 . + 0 ID=cds-WP_017922631.1;Parent=gene-NIV78_RS18925;Dbxref=Genbank:WP_017922631.1;Name=WP_017922631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877947.1;locus_tag=NIV78_RS18925;product=CoA transferase;protein_id=WP_017922631.1;transl_table=11 NZ_CP100137.1 RefSeq gene 401825 402595 . + . ID=gene-NIV78_RS18930;Name=NIV78_RS18930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18930 NZ_CP100137.1 Protein Homology CDS 401825 402595 . + 0 ID=cds-WP_015877946.1;Parent=gene-NIV78_RS18930;Dbxref=Genbank:WP_015877946.1;Name=WP_015877946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877946.1;locus_tag=NIV78_RS18930;product=SDR family oxidoreductase;protein_id=WP_015877946.1;transl_table=11 NZ_CP100137.1 RefSeq gene 402729 403238 . + . ID=gene-NIV78_RS18935;Name=NIV78_RS18935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18935 NZ_CP100137.1 Protein Homology CDS 402729 403238 . + 0 ID=cds-WP_241766786.1;Parent=gene-NIV78_RS18935;Dbxref=Genbank:WP_241766786.1;Name=WP_241766786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877945.1;locus_tag=NIV78_RS18935;product=chromate transporter;protein_id=WP_241766786.1;transl_table=11 NZ_CP100137.1 RefSeq gene 403243 403773 . + . ID=gene-NIV78_RS18940;Name=NIV78_RS18940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18940 NZ_CP100137.1 Protein Homology CDS 403243 403773 . + 0 ID=cds-WP_015877944.1;Parent=gene-NIV78_RS18940;Dbxref=Genbank:WP_015877944.1;Name=WP_015877944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877944.1;locus_tag=NIV78_RS18940;product=chromate transporter;protein_id=WP_015877944.1;transl_table=11 NZ_CP100137.1 RefSeq gene 403823 406477 . + . ID=gene-NIV78_RS18945;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=NIV78_RS18945 NZ_CP100137.1 Protein Homology CDS 403823 406477 . + 0 ID=cds-WP_015877943.1;Parent=gene-NIV78_RS18945;Dbxref=Genbank:WP_015877943.1;Name=WP_015877943.1;gbkey=CDS;gene=acnA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329205.1;locus_tag=NIV78_RS18945;product=aconitate hydratase AcnA;protein_id=WP_015877943.1;transl_table=11 NZ_CP100137.1 RefSeq gene 406697 407017 . + . ID=gene-NIV78_RS18950;Name=NIV78_RS18950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18950 NZ_CP100137.1 Protein Homology CDS 406697 407017 . + 0 ID=cds-WP_015877942.1;Parent=gene-NIV78_RS18950;Dbxref=Genbank:WP_015877942.1;Name=WP_015877942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545774.1;locus_tag=NIV78_RS18950;product=co-chaperone GroES;protein_id=WP_015877942.1;transl_table=11 NZ_CP100137.1 RefSeq gene 407117 408739 . + . ID=gene-NIV78_RS18955;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=NIV78_RS18955 NZ_CP100137.1 Protein Homology CDS 407117 408739 . + 0 ID=cds-WP_015877941.1;Parent=gene-NIV78_RS18955;Dbxref=Genbank:WP_015877941.1;Name=WP_015877941.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0006457,GO:0005515,GO:0016887;gbkey=CDS;gene=groL;go_function=protein binding|0005515||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006047184.1;locus_tag=NIV78_RS18955;product=chaperonin GroEL;protein_id=WP_015877941.1;transl_table=11 NZ_CP100137.1 cmsearch riboswitch 408980 409044 . + . ID=id-NZ_CP100137.1:408980..409044;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP100137.1 RefSeq gene 409121 409330 . + . ID=gene-NIV78_RS18960;Name=NIV78_RS18960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18960 NZ_CP100137.1 Protein Homology CDS 409121 409330 . + 0 ID=cds-WP_015877940.1;Parent=gene-NIV78_RS18960;Dbxref=Genbank:WP_015877940.1;Name=WP_015877940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546908.1;locus_tag=NIV78_RS18960;product=CbtB-domain containing protein;protein_id=WP_015877940.1;transl_table=11 NZ_CP100137.1 RefSeq gene 409344 410087 . + . ID=gene-NIV78_RS18965;Name=NIV78_RS18965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18965 NZ_CP100137.1 Protein Homology CDS 409344 410087 . + 0 ID=cds-WP_017423088.1;Parent=gene-NIV78_RS18965;Dbxref=Genbank:WP_017423088.1;Name=WP_017423088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423088.1;locus_tag=NIV78_RS18965;product=CbtA family protein;protein_id=WP_017423088.1;transl_table=11 NZ_CP100137.1 RefSeq gene 410189 410830 . + . ID=gene-NIV78_RS18970;Name=NIV78_RS18970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18970 NZ_CP100137.1 Protein Homology CDS 410189 410830 . + 0 ID=cds-WP_015877938.1;Parent=gene-NIV78_RS18970;Dbxref=Genbank:WP_015877938.1;Name=WP_015877938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877938.1;locus_tag=NIV78_RS18970;product=hypothetical protein;protein_id=WP_015877938.1;transl_table=11 NZ_CP100137.1 RefSeq gene 411162 412520 . + . ID=gene-NIV78_RS18975;Name=NIV78_RS18975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18975 NZ_CP100137.1 Protein Homology CDS 411162 412520 . + 0 ID=cds-WP_015877937.1;Parent=gene-NIV78_RS18975;Dbxref=Genbank:WP_015877937.1;Name=WP_015877937.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756642.1;locus_tag=NIV78_RS18975;product=MFS transporter;protein_id=WP_015877937.1;transl_table=11 NZ_CP100137.1 RefSeq gene 412539 413024 . - . ID=gene-NIV78_RS18980;Name=NIV78_RS18980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18980 NZ_CP100137.1 Protein Homology CDS 412539 413024 . - 0 ID=cds-WP_015877936.1;Parent=gene-NIV78_RS18980;Dbxref=Genbank:WP_015877936.1;Name=WP_015877936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877936.1;locus_tag=NIV78_RS18980;product=YaiI/YqxD family protein;protein_id=WP_015877936.1;transl_table=11 NZ_CP100137.1 RefSeq gene 413196 413831 . - . ID=gene-NIV78_RS18985;Name=NIV78_RS18985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18985 NZ_CP100137.1 Protein Homology CDS 413196 413831 . - 0 ID=cds-WP_257757794.1;Parent=gene-NIV78_RS18985;Dbxref=Genbank:WP_257757794.1;Name=WP_257757794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877935.1;locus_tag=NIV78_RS18985;product=hypothetical protein;protein_id=WP_257757794.1;transl_table=11 NZ_CP100137.1 RefSeq gene 413871 414557 . - . ID=gene-NIV78_RS18990;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=NIV78_RS18990 NZ_CP100137.1 Protein Homology CDS 413871 414557 . - 0 ID=cds-WP_017423879.1;Parent=gene-NIV78_RS18990;Dbxref=Genbank:WP_017423879.1;Name=WP_017423879.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423879.1;locus_tag=NIV78_RS18990;product=signal peptidase I;protein_id=WP_017423879.1;transl_table=11 NZ_CP100137.1 RefSeq gene 415082 415870 . + . ID=gene-NIV78_RS18995;Name=NIV78_RS18995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS18995 NZ_CP100137.1 Protein Homology CDS 415082 415870 . + 0 ID=cds-WP_017423880.1;Parent=gene-NIV78_RS18995;Dbxref=Genbank:WP_017423880.1;Name=WP_017423880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010927139.1;locus_tag=NIV78_RS18995;product=anion permease;protein_id=WP_017423880.1;transl_table=11 NZ_CP100137.1 RefSeq gene 415901 416956 . + . ID=gene-NIV78_RS19000;Name=NIV78_RS19000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19000 NZ_CP100137.1 Protein Homology CDS 415901 416956 . + 0 ID=cds-WP_015877932.1;Parent=gene-NIV78_RS19000;Dbxref=Genbank:WP_015877932.1;Name=WP_015877932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877932.1;locus_tag=NIV78_RS19000;product=Ldh family oxidoreductase;protein_id=WP_015877932.1;transl_table=11 NZ_CP100137.1 RefSeq gene 417023 418171 . - . ID=gene-NIV78_RS19005;Name=NIV78_RS19005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19005 NZ_CP100137.1 Protein Homology CDS 417023 418171 . - 0 ID=cds-WP_015877931.1;Parent=gene-NIV78_RS19005;Dbxref=Genbank:WP_015877931.1;Name=WP_015877931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493358.1;locus_tag=NIV78_RS19005;product=DUF1501 domain-containing protein;protein_id=WP_015877931.1;transl_table=11 NZ_CP100137.1 RefSeq gene 418176 419630 . - . ID=gene-NIV78_RS19010;Name=NIV78_RS19010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19010 NZ_CP100137.1 Protein Homology CDS 418176 419630 . - 0 ID=cds-WP_015877930.1;Parent=gene-NIV78_RS19010;Dbxref=Genbank:WP_015877930.1;Name=WP_015877930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494756.1;locus_tag=NIV78_RS19010;product=DUF1800 domain-containing protein;protein_id=WP_015877930.1;transl_table=11 NZ_CP100137.1 RefSeq gene 419803 420132 . - . ID=gene-NIV78_RS19015;Name=NIV78_RS19015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19015 NZ_CP100137.1 Protein Homology CDS 419803 420132 . - 0 ID=cds-WP_015877929.1;Parent=gene-NIV78_RS19015;Dbxref=Genbank:WP_015877929.1;Name=WP_015877929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877929.1;locus_tag=NIV78_RS19015;product=H-NS histone family protein;protein_id=WP_015877929.1;transl_table=11 NZ_CP100137.1 RefSeq gene 420366 422570 . - . ID=gene-NIV78_RS19020;Name=NIV78_RS19020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19020 NZ_CP100137.1 Protein Homology CDS 420366 422570 . - 0 ID=cds-WP_015877928.1;Parent=gene-NIV78_RS19020;Dbxref=Genbank:WP_015877928.1;Name=WP_015877928.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338295.1;locus_tag=NIV78_RS19020;product=glycoside hydrolase family 3 C-terminal domain-containing protein;protein_id=WP_015877928.1;transl_table=11 NZ_CP100137.1 RefSeq gene 422831 423214 . - . ID=gene-NIV78_RS19025;Name=NIV78_RS19025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19025 NZ_CP100137.1 Protein Homology CDS 422831 423214 . - 0 ID=cds-WP_015877927.1;Parent=gene-NIV78_RS19025;Dbxref=Genbank:WP_015877927.1;Name=WP_015877927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877927.1;locus_tag=NIV78_RS19025;product=cupin domain-containing protein;protein_id=WP_015877927.1;transl_table=11 NZ_CP100137.1 RefSeq gene 423396 423896 . - . ID=gene-NIV78_RS19030;Name=NIV78_RS19030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19030 NZ_CP100137.1 Protein Homology CDS 423396 423896 . - 0 ID=cds-WP_161521586.1;Parent=gene-NIV78_RS19030;Dbxref=Genbank:WP_161521586.1;Name=WP_161521586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877926.1;locus_tag=NIV78_RS19030;product=periplasmic heavy metal sensor;protein_id=WP_161521586.1;transl_table=11 NZ_CP100137.1 RefSeq gene 423893 424312 . - . ID=gene-NIV78_RS19035;Name=NIV78_RS19035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19035 NZ_CP100137.1 Protein Homology CDS 423893 424312 . - 0 ID=cds-WP_251107745.1;Parent=gene-NIV78_RS19035;Dbxref=Genbank:WP_251107745.1;Name=WP_251107745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013091638.1;locus_tag=NIV78_RS19035;product=hypothetical protein;protein_id=WP_251107745.1;transl_table=11 NZ_CP100137.1 RefSeq gene 424312 425055 . - . ID=gene-NIV78_RS19040;Name=NIV78_RS19040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19040 NZ_CP100137.1 Protein Homology CDS 424312 425055 . - 0 ID=cds-WP_080763682.1;Parent=gene-NIV78_RS19040;Dbxref=Genbank:WP_080763682.1;Name=WP_080763682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877924.1;locus_tag=NIV78_RS19040;product=RNA polymerase sigma factor;protein_id=WP_080763682.1;transl_table=11 NZ_CP100137.1 RefSeq gene 425387 425686 . - . ID=gene-NIV78_RS19045;Name=NIV78_RS19045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19045 NZ_CP100137.1 Protein Homology CDS 425387 425686 . - 0 ID=cds-WP_017924939.1;Parent=gene-NIV78_RS19045;Dbxref=Genbank:WP_017924939.1;Name=WP_017924939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877922.1;locus_tag=NIV78_RS19045;product=YXWGXW repeat-containing protein;protein_id=WP_017924939.1;transl_table=11 NZ_CP100137.1 RefSeq gene 425985 427115 . + . ID=gene-NIV78_RS19050;Name=NIV78_RS19050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19050 NZ_CP100137.1 GeneMarkS-2+ CDS 425985 427115 . + 0 ID=cds-WP_251107746.1;Parent=gene-NIV78_RS19050;Dbxref=Genbank:WP_251107746.1;Name=WP_251107746.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS19050;product=hypothetical protein;protein_id=WP_251107746.1;transl_table=11 NZ_CP100137.1 RefSeq gene 427637 428095 . + . ID=gene-NIV78_RS19055;Name=NIV78_RS19055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19055 NZ_CP100137.1 Protein Homology CDS 427637 428095 . + 0 ID=cds-WP_017924664.1;Parent=gene-NIV78_RS19055;Dbxref=Genbank:WP_017924664.1;Name=WP_017924664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877920.1;locus_tag=NIV78_RS19055;product=GNAT family N-acetyltransferase;protein_id=WP_017924664.1;transl_table=11 NZ_CP100137.1 RefSeq gene 428092 428745 . + . ID=gene-NIV78_RS19060;Name=NIV78_RS19060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19060 NZ_CP100137.1 Protein Homology CDS 428092 428745 . + 0 ID=cds-WP_015877919.1;Parent=gene-NIV78_RS19060;Dbxref=Genbank:WP_015877919.1;Name=WP_015877919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877919.1;locus_tag=NIV78_RS19060;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_015877919.1;transl_table=11 NZ_CP100137.1 RefSeq gene 428889 430367 . - . ID=gene-NIV78_RS19065;Name=NIV78_RS19065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19065 NZ_CP100137.1 Protein Homology CDS 428889 430367 . - 0 ID=cds-WP_015877918.1;Parent=gene-NIV78_RS19065;Dbxref=Genbank:WP_015877918.1;Name=WP_015877918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691335.1;locus_tag=NIV78_RS19065;product=PLP-dependent aminotransferase family protein;protein_id=WP_015877918.1;transl_table=11 NZ_CP100137.1 RefSeq gene 430764 430997 . - . ID=gene-NIV78_RS19070;Name=NIV78_RS19070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19070 NZ_CP100137.1 Protein Homology CDS 430764 430997 . - 0 ID=cds-WP_017425133.1;Parent=gene-NIV78_RS19070;Dbxref=Genbank:WP_017425133.1;Name=WP_017425133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425133.1;locus_tag=NIV78_RS19070;product=hypothetical protein;protein_id=WP_017425133.1;transl_table=11 NZ_CP100137.1 RefSeq gene 431403 431675 . + . ID=gene-NIV78_RS19075;Name=NIV78_RS19075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19075 NZ_CP100137.1 GeneMarkS-2+ CDS 431403 431675 . + 0 ID=cds-WP_124837246.1;Parent=gene-NIV78_RS19075;Dbxref=Genbank:WP_124837246.1;Name=WP_124837246.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS19075;product=hypothetical protein;protein_id=WP_124837246.1;transl_table=11 NZ_CP100137.1 RefSeq gene 432220 433359 . - . ID=gene-NIV78_RS19080;Name=NIV78_RS19080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19080 NZ_CP100137.1 Protein Homology CDS 432220 433359 . - 0 ID=cds-WP_251118981.1;Parent=gene-NIV78_RS19080;Dbxref=Genbank:WP_251118981.1;Name=WP_251118981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877917.1;locus_tag=NIV78_RS19080;product=TonB family protein;protein_id=WP_251118981.1;transl_table=11 NZ_CP100137.1 RefSeq gene 433419 434477 . - . ID=gene-NIV78_RS19085;Name=NIV78_RS19085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19085 NZ_CP100137.1 Protein Homology CDS 433419 434477 . - 0 ID=cds-WP_017924679.1;Parent=gene-NIV78_RS19085;Dbxref=Genbank:WP_017924679.1;Name=WP_017924679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691329.1;locus_tag=NIV78_RS19085;product=lysozyme inhibitor LprI family protein;protein_id=WP_017924679.1;transl_table=11 NZ_CP100137.1 RefSeq gene 434983 435999 . - . ID=gene-NIV78_RS19090;Name=NIV78_RS19090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19090 NZ_CP100137.1 Protein Homology CDS 434983 435999 . - 0 ID=cds-WP_153478261.1;Parent=gene-NIV78_RS19090;Dbxref=Genbank:WP_153478261.1;Name=WP_153478261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877915.1;locus_tag=NIV78_RS19090;product=LysR family transcriptional regulator;protein_id=WP_153478261.1;transl_table=11 NZ_CP100137.1 RefSeq gene 436130 437428 . + . ID=gene-NIV78_RS19095;Name=NIV78_RS19095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19095 NZ_CP100137.1 Protein Homology CDS 436130 437428 . + 0 ID=cds-WP_124837243.1;Parent=gene-NIV78_RS19095;Dbxref=Genbank:WP_124837243.1;Name=WP_124837243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877914.1;locus_tag=NIV78_RS19095;product=MFS transporter;protein_id=WP_124837243.1;transl_table=11 NZ_CP100137.1 RefSeq gene 437439 438332 . + . ID=gene-NIV78_RS19100;Name=NIV78_RS19100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19100 NZ_CP100137.1 Protein Homology CDS 437439 438332 . + 0 ID=cds-WP_017924371.1;Parent=gene-NIV78_RS19100;Dbxref=Genbank:WP_017924371.1;Name=WP_017924371.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877913.1;locus_tag=NIV78_RS19100;product=amidohydrolase family protein;protein_id=WP_017924371.1;transl_table=11 NZ_CP100137.1 RefSeq gene 438417 438878 . - . ID=gene-NIV78_RS19105;Name=NIV78_RS19105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19105 NZ_CP100137.1 Protein Homology CDS 438417 438878 . - 0 ID=cds-WP_017425056.1;Parent=gene-NIV78_RS19105;Dbxref=Genbank:WP_017425056.1;Name=WP_017425056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425056.1;locus_tag=NIV78_RS19105;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_017425056.1;transl_table=11 NZ_CP100137.1 RefSeq gene 438875 439318 . - . ID=gene-NIV78_RS19110;Name=NIV78_RS19110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19110 NZ_CP100137.1 Protein Homology CDS 438875 439318 . - 0 ID=cds-WP_015877911.1;Parent=gene-NIV78_RS19110;Dbxref=Genbank:WP_015877911.1;Name=WP_015877911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877911.1;locus_tag=NIV78_RS19110;product=cupin domain-containing protein;protein_id=WP_015877911.1;transl_table=11 NZ_CP100137.1 RefSeq gene 439414 440832 . + . ID=gene-NIV78_RS19115;Name=NIV78_RS19115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19115 NZ_CP100137.1 Protein Homology CDS 439414 440832 . + 0 ID=cds-WP_124837241.1;Parent=gene-NIV78_RS19115;Dbxref=Genbank:WP_124837241.1;Name=WP_124837241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877910.1;locus_tag=NIV78_RS19115;product=PLP-dependent aminotransferase family protein;protein_id=WP_124837241.1;transl_table=11 NZ_CP100137.1 RefSeq gene 440976 441122 . - . ID=gene-NIV78_RS19120;Name=NIV78_RS19120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19120 NZ_CP100137.1 Protein Homology CDS 440976 441122 . - 0 ID=cds-WP_017433777.1;Parent=gene-NIV78_RS19120;Dbxref=Genbank:WP_017433777.1;Name=WP_017433777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017774228.1;locus_tag=NIV78_RS19120;product=hypothetical protein;protein_id=WP_017433777.1;transl_table=11 NZ_CP100137.1 RefSeq gene 441813 443087 . + . ID=gene-NIV78_RS19125;Name=NIV78_RS19125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19125 NZ_CP100137.1 Protein Homology CDS 441813 443087 . + 0 ID=cds-WP_100556119.1;Parent=gene-NIV78_RS19125;Dbxref=Genbank:WP_100556119.1;Name=WP_100556119.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877909.1;locus_tag=NIV78_RS19125;product=MFS transporter;protein_id=WP_100556119.1;transl_table=11 NZ_CP100137.1 RefSeq gene 443208 443930 . - . ID=gene-NIV78_RS19130;Name=NIV78_RS19130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19130 NZ_CP100137.1 Protein Homology CDS 443208 443930 . - 0 ID=cds-WP_100556118.1;Parent=gene-NIV78_RS19130;Dbxref=Genbank:WP_100556118.1;Name=WP_100556118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877908.1;locus_tag=NIV78_RS19130;product=YceH family protein;protein_id=WP_100556118.1;transl_table=11 NZ_CP100137.1 RefSeq gene 444096 445004 . - . ID=gene-NIV78_RS19135;Name=NIV78_RS19135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19135 NZ_CP100137.1 Protein Homology CDS 444096 445004 . - 0 ID=cds-WP_015877907.1;Parent=gene-NIV78_RS19135;Dbxref=Genbank:WP_015877907.1;Name=WP_015877907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660740.1;locus_tag=NIV78_RS19135;product=LysR family transcriptional regulator;protein_id=WP_015877907.1;transl_table=11 NZ_CP100137.1 RefSeq gene 445150 446022 . + . ID=gene-NIV78_RS19140;Name=NIV78_RS19140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19140 NZ_CP100137.1 Protein Homology CDS 445150 446022 . + 0 ID=cds-WP_015877906.1;Parent=gene-NIV78_RS19140;Dbxref=Genbank:WP_015877906.1;Name=WP_015877906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339806.1;locus_tag=NIV78_RS19140;product=NAD(P)-dependent oxidoreductase;protein_id=WP_015877906.1;transl_table=11 NZ_CP100137.1 RefSeq gene 446069 447580 . + . ID=gene-NIV78_RS19145;Name=NIV78_RS19145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19145 NZ_CP100137.1 Protein Homology CDS 446069 447580 . + 0 ID=cds-WP_017423916.1;Parent=gene-NIV78_RS19145;Dbxref=Genbank:WP_017423916.1;Name=WP_017423916.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691304.1;locus_tag=NIV78_RS19145;product=aldehyde dehydrogenase family protein;protein_id=WP_017423916.1;transl_table=11 NZ_CP100137.1 RefSeq gene 447628 448965 . + . ID=gene-NIV78_RS19150;Name=NIV78_RS19150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19150 NZ_CP100137.1 Protein Homology CDS 447628 448965 . + 0 ID=cds-WP_017423917.1;Parent=gene-NIV78_RS19150;Dbxref=Genbank:WP_017423917.1;Name=WP_017423917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753465.1;locus_tag=NIV78_RS19150;product=DUF3100 domain-containing protein;protein_id=WP_017423917.1;transl_table=11 NZ_CP100137.1 RefSeq gene 448999 450198 . + . ID=gene-NIV78_RS19155;Name=NIV78_RS19155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19155 NZ_CP100137.1 Protein Homology CDS 448999 450198 . + 0 ID=cds-WP_017423918.1;Parent=gene-NIV78_RS19155;Dbxref=Genbank:WP_017423918.1;Name=WP_017423918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877903.1;locus_tag=NIV78_RS19155;product=M20 family metallopeptidase;protein_id=WP_017423918.1;transl_table=11 NZ_CP100137.1 RefSeq gene 450240 452402 . - . ID=gene-NIV78_RS19160;Name=NIV78_RS19160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19160 NZ_CP100137.1 Protein Homology CDS 450240 452402 . - 0 ID=cds-WP_017423919.1;Parent=gene-NIV78_RS19160;Dbxref=Genbank:WP_017423919.1;Name=WP_017423919.1;Ontology_term=GO:0005975,GO:0004650;gbkey=CDS;go_function=polygalacturonase activity|0004650||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877902.1;locus_tag=NIV78_RS19160;product=glycosyl hydrolase family 28 protein;protein_id=WP_017423919.1;transl_table=11 NZ_CP100137.1 RefSeq gene 453384 453623 . + . ID=gene-NIV78_RS19165;Name=NIV78_RS19165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19165 NZ_CP100137.1 Protein Homology CDS 453384 453623 . + 0 ID=cds-WP_017423920.1;Parent=gene-NIV78_RS19165;Dbxref=Genbank:WP_017423920.1;Name=WP_017423920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423920.1;locus_tag=NIV78_RS19165;product=hypothetical protein;protein_id=WP_017423920.1;transl_table=11 NZ_CP100137.1 RefSeq gene 453708 455426 . + . ID=gene-NIV78_RS19170;Name=NIV78_RS19170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19170 NZ_CP100137.1 Protein Homology CDS 453708 455426 . + 0 ID=cds-WP_017423921.1;Parent=gene-NIV78_RS19170;Dbxref=Genbank:WP_017423921.1;Name=WP_017423921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877901.1;locus_tag=NIV78_RS19170;product=hypothetical protein;protein_id=WP_017423921.1;transl_table=11 NZ_CP100137.1 RefSeq gene 455498 455884 . - . ID=gene-NIV78_RS19175;Name=NIV78_RS19175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19175 NZ_CP100137.1 Protein Homology CDS 455498 455884 . - 0 ID=cds-WP_017423922.1;Parent=gene-NIV78_RS19175;Dbxref=Genbank:WP_017423922.1;Name=WP_017423922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877900.1;locus_tag=NIV78_RS19175;product=class I SAM-dependent methyltransferase;protein_id=WP_017423922.1;transl_table=11 NZ_CP100137.1 RefSeq gene 455918 456541 . - . ID=gene-NIV78_RS19180;Name=NIV78_RS19180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19180 NZ_CP100137.1 Protein Homology CDS 455918 456541 . - 0 ID=cds-WP_100556130.1;Parent=gene-NIV78_RS19180;Dbxref=Genbank:WP_100556130.1;Name=WP_100556130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877899.1;locus_tag=NIV78_RS19180;product=lipocalin family protein;protein_id=WP_100556130.1;transl_table=11 NZ_CP100137.1 RefSeq gene 456584 457678 . - . ID=gene-NIV78_RS19185;Name=NIV78_RS19185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19185 NZ_CP100137.1 Protein Homology CDS 456584 457678 . - 0 ID=cds-WP_015877898.1;Parent=gene-NIV78_RS19185;Dbxref=Genbank:WP_015877898.1;Name=WP_015877898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877898.1;locus_tag=NIV78_RS19185;product=cyclopropane-fatty-acyl-phospholipid synthase family protein;protein_id=WP_015877898.1;transl_table=11 NZ_CP100137.1 RefSeq gene 457675 458490 . - . ID=gene-NIV78_RS19190;Name=NIV78_RS19190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19190 NZ_CP100137.1 Protein Homology CDS 457675 458490 . - 0 ID=cds-WP_015877897.1;Parent=gene-NIV78_RS19190;Dbxref=Genbank:WP_015877897.1;Name=WP_015877897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877897.1;locus_tag=NIV78_RS19190;product=DUF1295 domain-containing protein;protein_id=WP_015877897.1;transl_table=11 NZ_CP100137.1 RefSeq gene 458549 458713 . + . ID=gene-NIV78_RS19195;Name=NIV78_RS19195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19195 NZ_CP100137.1 GeneMarkS-2+ CDS 458549 458713 . + 0 ID=cds-WP_153478248.1;Parent=gene-NIV78_RS19195;Dbxref=Genbank:WP_153478248.1;Name=WP_153478248.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS19195;product=hypothetical protein;protein_id=WP_153478248.1;transl_table=11 NZ_CP100137.1 RefSeq gene 458855 459949 . + . ID=gene-NIV78_RS19200;Name=NIV78_RS19200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19200 NZ_CP100137.1 Protein Homology CDS 458855 459949 . + 0 ID=cds-WP_232734560.1;Parent=gene-NIV78_RS19200;Dbxref=Genbank:WP_232734560.1;Name=WP_232734560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425462.1;locus_tag=NIV78_RS19200;product=hypothetical protein;protein_id=WP_232734560.1;transl_table=11 NZ_CP100137.1 RefSeq gene 460045 460800 . - . ID=gene-NIV78_RS19205;Name=NIV78_RS19205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19205 NZ_CP100137.1 Protein Homology CDS 460045 460800 . - 0 ID=cds-WP_251107748.1;Parent=gene-NIV78_RS19205;Dbxref=Genbank:WP_251107748.1;Name=WP_251107748.1;Ontology_term=GO:0005886,GO:0016021;gbkey=CDS;go_component=plasma membrane|0005886||IEA,integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877896.1;locus_tag=NIV78_RS19205;product=anti-sigma factor;protein_id=WP_251107748.1;transl_table=11 NZ_CP100137.1 RefSeq gene 460797 461405 . - . ID=gene-NIV78_RS19210;Name=NIV78_RS19210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19210 NZ_CP100137.1 Protein Homology CDS 460797 461405 . - 0 ID=cds-WP_015877895.1;Parent=gene-NIV78_RS19210;Dbxref=Genbank:WP_015877895.1;Name=WP_015877895.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725779.1;locus_tag=NIV78_RS19210;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_015877895.1;transl_table=11 NZ_CP100137.1 RefSeq gene 462227 463033 . + . ID=gene-NIV78_RS19215;Name=NIV78_RS19215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19215 NZ_CP100137.1 Protein Homology CDS 462227 463033 . + 0 ID=cds-WP_257757800.1;Parent=gene-NIV78_RS19215;Dbxref=Genbank:WP_257757800.1;Name=WP_257757800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006475949.1;locus_tag=NIV78_RS19215;product=sulfite exporter TauE/SafE family protein;protein_id=WP_257757800.1;transl_table=11 NZ_CP100137.1 RefSeq gene 463242 463742 . - . ID=gene-NIV78_RS19220;Name=NIV78_RS19220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19220 NZ_CP100137.1 Protein Homology CDS 463242 463742 . - 0 ID=cds-WP_015877892.1;Parent=gene-NIV78_RS19220;Dbxref=Genbank:WP_015877892.1;Name=WP_015877892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877892.1;locus_tag=NIV78_RS19220;product=MEKHLA domain-containing protein;protein_id=WP_015877892.1;transl_table=11 NZ_CP100137.1 RefSeq gene 463824 464384 . + . ID=gene-NIV78_RS19225;Name=NIV78_RS19225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19225 NZ_CP100137.1 GeneMarkS-2+ CDS 463824 464384 . + 0 ID=cds-WP_157384171.1;Parent=gene-NIV78_RS19225;Dbxref=Genbank:WP_157384171.1;Name=WP_157384171.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS19225;product=hypothetical protein;protein_id=WP_157384171.1;transl_table=11 NZ_CP100137.1 RefSeq gene 465685 466797 . + . ID=gene-NIV78_RS19230;Name=NIV78_RS19230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19230 NZ_CP100137.1 Protein Homology CDS 465685 466797 . + 0 ID=cds-WP_251107749.1;Parent=gene-NIV78_RS19230;Dbxref=Genbank:WP_251107749.1;Name=WP_251107749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877891.1;locus_tag=NIV78_RS19230;product=DUF2817 domain-containing protein;protein_id=WP_251107749.1;transl_table=11 NZ_CP100137.1 RefSeq gene 466855 467481 . - . ID=gene-NIV78_RS19235;Name=NIV78_RS19235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19235 NZ_CP100137.1 Protein Homology CDS 466855 467481 . - 0 ID=cds-WP_257757801.1;Parent=gene-NIV78_RS19235;Dbxref=Genbank:WP_257757801.1;Name=WP_257757801.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.2;locus_tag=NIV78_RS19235;product=LysR substrate-binding domain-containing protein;protein_id=WP_257757801.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 467643 467801 . - . ID=gene-NIV78_RS19240;Name=NIV78_RS19240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS19240;partial=true;pseudo=true;start_range=.,467643 NZ_CP100137.1 Protein Homology CDS 467643 467801 . - 0 ID=cds-NIV78_RS19240;Parent=gene-NIV78_RS19240;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012354.2;locus_tag=NIV78_RS19240;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,467643;transl_table=11 NZ_CP100137.1 RefSeq gene 468458 469570 . - . ID=gene-NIV78_RS19245;Name=NIV78_RS19245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19245 NZ_CP100137.1 Protein Homology CDS 468458 469570 . - 0 ID=cds-WP_015877889.1;Parent=gene-NIV78_RS19245;Dbxref=Genbank:WP_015877889.1;Name=WP_015877889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877889.1;locus_tag=NIV78_RS19245;product=NADH:flavin oxidoreductase/NADH oxidase;protein_id=WP_015877889.1;transl_table=11 NZ_CP100137.1 RefSeq gene 470158 471780 . + . ID=gene-NIV78_RS19250;Name=NIV78_RS19250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19250 NZ_CP100137.1 Protein Homology CDS 470158 471780 . + 0 ID=cds-WP_017923479.1;Parent=gene-NIV78_RS19250;Dbxref=Genbank:WP_017923479.1;Name=WP_017923479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877888.1;locus_tag=NIV78_RS19250;product=3-keto-5-aminohexanoate cleavage protein;protein_id=WP_017923479.1;transl_table=11 NZ_CP100137.1 RefSeq gene 471788 472318 . + . ID=gene-NIV78_RS19255;Name=NIV78_RS19255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19255 NZ_CP100137.1 Protein Homology CDS 471788 472318 . + 0 ID=cds-WP_015877887.1;Parent=gene-NIV78_RS19255;Dbxref=Genbank:WP_015877887.1;Name=WP_015877887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877887.1;locus_tag=NIV78_RS19255;product=gamma carbonic anhydrase family protein;protein_id=WP_015877887.1;transl_table=11 NZ_CP100137.1 RefSeq gene 472400 473329 . - . ID=gene-NIV78_RS19260;Name=NIV78_RS19260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19260 NZ_CP100137.1 Protein Homology CDS 472400 473329 . - 0 ID=cds-WP_017923478.1;Parent=gene-NIV78_RS19260;Dbxref=Genbank:WP_017923478.1;Name=WP_017923478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877886.1;locus_tag=NIV78_RS19260;product=LysR substrate-binding domain-containing protein;protein_id=WP_017923478.1;transl_table=11 NZ_CP100137.1 RefSeq gene 473495 474523 . + . ID=gene-NIV78_RS19265;Name=NIV78_RS19265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19265 NZ_CP100137.1 Protein Homology CDS 473495 474523 . + 0 ID=cds-WP_017923477.1;Parent=gene-NIV78_RS19265;Dbxref=Genbank:WP_017923477.1;Name=WP_017923477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877885.1;locus_tag=NIV78_RS19265;product=DUF1338 domain-containing protein;protein_id=WP_017923477.1;transl_table=11 NZ_CP100137.1 RefSeq gene 474816 475034 . + . ID=gene-NIV78_RS19270;Name=NIV78_RS19270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19270 NZ_CP100137.1 GeneMarkS-2+ CDS 474816 475034 . + 0 ID=cds-WP_100556114.1;Parent=gene-NIV78_RS19270;Dbxref=Genbank:WP_100556114.1;Name=WP_100556114.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS19270;product=hypothetical protein;protein_id=WP_100556114.1;transl_table=11 NZ_CP100137.1 RefSeq gene 475211 476710 . + . ID=gene-NIV78_RS19275;Name=NIV78_RS19275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19275 NZ_CP100137.1 Protein Homology CDS 475211 476710 . + 0 ID=cds-WP_015877884.1;Parent=gene-NIV78_RS19275;Dbxref=Genbank:WP_015877884.1;Name=WP_015877884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014972844.1;locus_tag=NIV78_RS19275;product=aldehyde dehydrogenase family protein;protein_id=WP_015877884.1;transl_table=11 NZ_CP100137.1 RefSeq gene 476755 477927 . + . ID=gene-NIV78_RS19280;Name=NIV78_RS19280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19280 NZ_CP100137.1 Protein Homology CDS 476755 477927 . + 0 ID=cds-WP_015877883.1;Parent=gene-NIV78_RS19280;Dbxref=Genbank:WP_015877883.1;Name=WP_015877883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356268.1;locus_tag=NIV78_RS19280;product=FAD-binding oxidoreductase;protein_id=WP_015877883.1;transl_table=11 NZ_CP100137.1 RefSeq gene 477945 479171 . + . ID=gene-NIV78_RS19285;Name=NIV78_RS19285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19285 NZ_CP100137.1 Protein Homology CDS 477945 479171 . + 0 ID=cds-WP_015877882.1;Parent=gene-NIV78_RS19285;Dbxref=Genbank:WP_015877882.1;Name=WP_015877882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365333.1;locus_tag=NIV78_RS19285;product=PLP-dependent aminotransferase family protein;protein_id=WP_015877882.1;transl_table=11 NZ_CP100137.1 RefSeq gene 479770 480084 . + . ID=gene-NIV78_RS19290;Name=NIV78_RS19290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19290 NZ_CP100137.1 Protein Homology CDS 479770 480084 . + 0 ID=cds-WP_017425388.1;Parent=gene-NIV78_RS19290;Dbxref=Genbank:WP_017425388.1;Name=WP_017425388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425388.1;locus_tag=NIV78_RS19290;product=hypothetical protein;protein_id=WP_017425388.1;transl_table=11 NZ_CP100137.1 RefSeq gene 480158 480505 . + . ID=gene-NIV78_RS19295;Name=NIV78_RS19295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19295 NZ_CP100137.1 Protein Homology CDS 480158 480505 . + 0 ID=cds-WP_017425387.1;Parent=gene-NIV78_RS19295;Dbxref=Genbank:WP_017425387.1;Name=WP_017425387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425387.1;locus_tag=NIV78_RS19295;product=hypothetical protein;protein_id=WP_017425387.1;transl_table=11 NZ_CP100137.1 RefSeq gene 480522 480986 . + . ID=gene-NIV78_RS19300;Name=NIV78_RS19300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19300 NZ_CP100137.1 Protein Homology CDS 480522 480986 . + 0 ID=cds-WP_230674596.1;Parent=gene-NIV78_RS19300;Dbxref=Genbank:WP_230674596.1;Name=WP_230674596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877881.1;locus_tag=NIV78_RS19300;product=hypothetical protein;protein_id=WP_230674596.1;transl_table=11 NZ_CP100137.1 RefSeq gene 481087 481428 . + . ID=gene-NIV78_RS19305;Name=NIV78_RS19305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19305 NZ_CP100137.1 Protein Homology CDS 481087 481428 . + 0 ID=cds-WP_230674595.1;Parent=gene-NIV78_RS19305;Dbxref=Genbank:WP_230674595.1;Name=WP_230674595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877880.1;locus_tag=NIV78_RS19305;product=hypothetical protein;protein_id=WP_230674595.1;transl_table=11 NZ_CP100137.1 RefSeq gene 481425 481622 . + . ID=gene-NIV78_RS19310;Name=NIV78_RS19310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19310 NZ_CP100137.1 Protein Homology CDS 481425 481622 . + 0 ID=cds-WP_017425386.1;Parent=gene-NIV78_RS19310;Dbxref=Genbank:WP_017425386.1;Name=WP_017425386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425386.1;locus_tag=NIV78_RS19310;product=hypothetical protein;protein_id=WP_017425386.1;transl_table=11 NZ_CP100137.1 RefSeq gene 481709 483208 . + . ID=gene-NIV78_RS19315;Name=NIV78_RS19315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19315 NZ_CP100137.1 Protein Homology CDS 481709 483208 . + 0 ID=cds-WP_015877879.1;Parent=gene-NIV78_RS19315;Dbxref=Genbank:WP_015877879.1;Name=WP_015877879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877879.1;locus_tag=NIV78_RS19315;product=serine/threonine protein kinase;protein_id=WP_015877879.1;transl_table=11 NZ_CP100137.1 RefSeq gene 483215 483577 . + . ID=gene-NIV78_RS19320;Name=NIV78_RS19320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19320 NZ_CP100137.1 Protein Homology CDS 483215 483577 . + 0 ID=cds-WP_015877878.1;Parent=gene-NIV78_RS19320;Dbxref=Genbank:WP_015877878.1;Name=WP_015877878.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877878.1;locus_tag=NIV78_RS19320;product=response regulator;protein_id=WP_015877878.1;transl_table=11 NZ_CP100137.1 RefSeq gene 483801 484484 . + . ID=gene-NIV78_RS19325;Name=NIV78_RS19325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19325 NZ_CP100137.1 Protein Homology CDS 483801 484484 . + 0 ID=cds-WP_015877877.1;Parent=gene-NIV78_RS19325;Dbxref=Genbank:WP_015877877.1;Name=WP_015877877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691215.1;locus_tag=NIV78_RS19325;product=biliverdin-producing heme oxygenase;protein_id=WP_015877877.1;transl_table=11 NZ_CP100137.1 RefSeq gene 484499 486178 . + . ID=gene-NIV78_RS19330;Name=NIV78_RS19330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19330 NZ_CP100137.1 Protein Homology CDS 484499 486178 . + 0 ID=cds-WP_015877876.1;Parent=gene-NIV78_RS19330;Dbxref=Genbank:WP_015877876.1;Name=WP_015877876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877876.1;locus_tag=NIV78_RS19330;product=ATP-binding protein;protein_id=WP_015877876.1;transl_table=11 NZ_CP100137.1 RefSeq gene 486274 486711 . - . ID=gene-NIV78_RS19335;Name=NIV78_RS19335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19335 NZ_CP100137.1 Protein Homology CDS 486274 486711 . - 0 ID=cds-WP_015877875.1;Parent=gene-NIV78_RS19335;Dbxref=Genbank:WP_015877875.1;Name=WP_015877875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877875.1;locus_tag=NIV78_RS19335;product=response regulator;protein_id=WP_015877875.1;transl_table=11 NZ_CP100137.1 RefSeq gene 486815 489205 . - . ID=gene-NIV78_RS19340;Name=NIV78_RS19340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19340 NZ_CP100137.1 Protein Homology CDS 486815 489205 . - 0 ID=cds-WP_017923348.1;Parent=gene-NIV78_RS19340;Dbxref=Genbank:WP_017923348.1;Name=WP_017923348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877874.1;locus_tag=NIV78_RS19340;product=ATP-binding protein;protein_id=WP_017923348.1;transl_table=11 NZ_CP100137.1 RefSeq gene 489569 490498 . + . ID=gene-NIV78_RS19345;Name=NIV78_RS19345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19345 NZ_CP100137.1 Protein Homology CDS 489569 490498 . + 0 ID=cds-WP_017923347.1;Parent=gene-NIV78_RS19345;Dbxref=Genbank:WP_017923347.1;Name=WP_017923347.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012873.2;locus_tag=NIV78_RS19345;product=condensation domain-containing protein;protein_id=WP_017923347.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 490800 491138 . + . ID=gene-NIV78_RS19350;Name=NIV78_RS19350;end_range=491138,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS19350;partial=true;pseudo=true NZ_CP100137.1 Protein Homology CDS 490800 491138 . + 0 ID=cds-NIV78_RS19350;Parent=gene-NIV78_RS19350;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=491138,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013587663.1;locus_tag=NIV78_RS19350;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP100137.1 RefSeq gene 491770 493137 . + . ID=gene-NIV78_RS19355;Name=hmgA;gbkey=Gene;gene=hmgA;gene_biotype=protein_coding;locus_tag=NIV78_RS19355 NZ_CP100137.1 Protein Homology CDS 491770 493137 . + 0 ID=cds-WP_051071182.1;Parent=gene-NIV78_RS19355;Dbxref=Genbank:WP_051071182.1;Name=WP_051071182.1;Ontology_term=GO:0006559,GO:0006572,GO:0004411;gbkey=CDS;gene=hmgA;go_function=homogentisate 1%2C2-dioxygenase activity|0004411||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877871.1;locus_tag=NIV78_RS19355;product=homogentisate 1%2C2-dioxygenase;protein_id=WP_051071182.1;transl_table=11 NZ_CP100137.1 RefSeq gene 493134 494471 . + . ID=gene-NIV78_RS19360;Name=fahA;gbkey=Gene;gene=fahA;gene_biotype=protein_coding;locus_tag=NIV78_RS19360 NZ_CP100137.1 Protein Homology CDS 493134 494471 . + 0 ID=cds-WP_017924120.1;Parent=gene-NIV78_RS19360;Dbxref=Genbank:WP_017924120.1;Name=WP_017924120.1;Ontology_term=GO:0006559,GO:0006572,GO:0004334;gbkey=CDS;gene=fahA;go_function=fumarylacetoacetase activity|0004334||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877870.1;locus_tag=NIV78_RS19360;product=fumarylacetoacetase;protein_id=WP_017924120.1;transl_table=11 NZ_CP100137.1 RefSeq gene 494464 495132 . + . ID=gene-NIV78_RS19365;Name=maiA;gbkey=Gene;gene=maiA;gene_biotype=protein_coding;locus_tag=NIV78_RS19365 NZ_CP100137.1 Protein Homology CDS 494464 495132 . + 0 ID=cds-WP_015877869.1;Parent=gene-NIV78_RS19365;Dbxref=Genbank:WP_015877869.1;Name=WP_015877869.1;Ontology_term=GO:0006559,GO:0006572,GO:0016034;gbkey=CDS;gene=maiA;go_function=maleylacetoacetate isomerase activity|0016034||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877869.1;locus_tag=NIV78_RS19365;product=maleylacetoacetate isomerase;protein_id=WP_015877869.1;transl_table=11 NZ_CP100137.1 cmsearch riboswitch 495360 495541 . + . ID=id-NZ_CP100137.1:495360..495541;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP100137.1 RefSeq gene 495609 496607 . + . ID=gene-NIV78_RS19370;Name=NIV78_RS19370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19370 NZ_CP100137.1 Protein Homology CDS 495609 496607 . + 0 ID=cds-WP_035978443.1;Parent=gene-NIV78_RS19370;Dbxref=Genbank:WP_035978443.1;Name=WP_035978443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691200.1;locus_tag=NIV78_RS19370;product=sodium:calcium antiporter;protein_id=WP_035978443.1;transl_table=11 NZ_CP100137.1 RefSeq gene 496938 497789 . - . ID=gene-NIV78_RS19375;Name=NIV78_RS19375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19375 NZ_CP100137.1 Protein Homology CDS 496938 497789 . - 0 ID=cds-WP_257757803.1;Parent=gene-NIV78_RS19375;Dbxref=Genbank:WP_257757803.1;Name=WP_257757803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877867.1;locus_tag=NIV78_RS19375;product=alpha/beta hydrolase;protein_id=WP_257757803.1;transl_table=11 NZ_CP100137.1 RefSeq gene 498763 500004 . + . ID=gene-NIV78_RS19380;Name=NIV78_RS19380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19380 NZ_CP100137.1 Protein Homology CDS 498763 500004 . + 0 ID=cds-WP_017924523.1;Parent=gene-NIV78_RS19380;Dbxref=Genbank:WP_017924523.1;Name=WP_017924523.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877866.1;locus_tag=NIV78_RS19380;product=FAD-dependent oxidoreductase;protein_id=WP_017924523.1;transl_table=11 NZ_CP100137.1 RefSeq gene 500519 500968 . + . ID=gene-NIV78_RS19385;Name=NIV78_RS19385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19385 NZ_CP100137.1 Protein Homology CDS 500519 500968 . + 0 ID=cds-WP_015877865.1;Parent=gene-NIV78_RS19385;Dbxref=Genbank:WP_015877865.1;Name=WP_015877865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877865.1;locus_tag=NIV78_RS19385;product=PA2169 family four-helix-bundle protein;protein_id=WP_015877865.1;transl_table=11 NZ_CP100137.1 RefSeq gene 501042 501344 . - . ID=gene-NIV78_RS19390;Name=NIV78_RS19390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19390 NZ_CP100137.1 GeneMarkS-2+ CDS 501042 501344 . - 0 ID=cds-WP_015877864.1;Parent=gene-NIV78_RS19390;Dbxref=Genbank:WP_015877864.1;Name=WP_015877864.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS19390;product=hypothetical protein;protein_id=WP_015877864.1;transl_table=11 NZ_CP100137.1 RefSeq gene 501409 502935 . - . ID=gene-NIV78_RS19395;Name=NIV78_RS19395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19395 NZ_CP100137.1 Protein Homology CDS 501409 502935 . - 0 ID=cds-WP_015877863.1;Parent=gene-NIV78_RS19395;Dbxref=Genbank:WP_015877863.1;Name=WP_015877863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656544.1;locus_tag=NIV78_RS19395;product=altronate dehydratase family protein;protein_id=WP_015877863.1;transl_table=11 NZ_CP100137.1 RefSeq gene 502950 504092 . - . ID=gene-NIV78_RS19400;Name=NIV78_RS19400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19400 NZ_CP100137.1 Protein Homology CDS 502950 504092 . - 0 ID=cds-WP_015877862.1;Parent=gene-NIV78_RS19400;Dbxref=Genbank:WP_015877862.1;Name=WP_015877862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424712.1;locus_tag=NIV78_RS19400;product=D-mannonate oxidoreductase;protein_id=WP_015877862.1;transl_table=11 NZ_CP100137.1 RefSeq gene 504124 505134 . - . ID=gene-NIV78_RS19405;Name=NIV78_RS19405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19405 NZ_CP100137.1 Protein Homology CDS 504124 505134 . - 0 ID=cds-WP_015877861.1;Parent=gene-NIV78_RS19405;Dbxref=Genbank:WP_015877861.1;Name=WP_015877861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006052099.1;locus_tag=NIV78_RS19405;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_015877861.1;transl_table=11 NZ_CP100137.1 RefSeq gene 505147 506031 . - . ID=gene-NIV78_RS19410;Name=NIV78_RS19410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19410 NZ_CP100137.1 Protein Homology CDS 505147 506031 . - 0 ID=cds-WP_015877860.1;Parent=gene-NIV78_RS19410;Dbxref=Genbank:WP_015877860.1;Name=WP_015877860.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877860.1;locus_tag=NIV78_RS19410;product=amidohydrolase family protein;protein_id=WP_015877860.1;transl_table=11 NZ_CP100137.1 RefSeq gene 506028 507044 . - . ID=gene-NIV78_RS19415;Name=NIV78_RS19415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19415 NZ_CP100137.1 Protein Homology CDS 506028 507044 . - 0 ID=cds-WP_015877859.1;Parent=gene-NIV78_RS19415;Dbxref=Genbank:WP_015877859.1;Name=WP_015877859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877859.1;locus_tag=NIV78_RS19415;product=aldo/keto reductase;protein_id=WP_015877859.1;transl_table=11 NZ_CP100137.1 RefSeq gene 507130 508077 . - . ID=gene-NIV78_RS19420;Name=NIV78_RS19420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19420 NZ_CP100137.1 Protein Homology CDS 507130 508077 . - 0 ID=cds-WP_015877858.1;Parent=gene-NIV78_RS19420;Dbxref=Genbank:WP_015877858.1;Name=WP_015877858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757164.1;locus_tag=NIV78_RS19420;product=ABC transporter substrate-binding protein;protein_id=WP_015877858.1;transl_table=11 NZ_CP100137.1 RefSeq gene 508134 509168 . - . ID=gene-NIV78_RS19425;Name=NIV78_RS19425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19425 NZ_CP100137.1 Protein Homology CDS 508134 509168 . - 0 ID=cds-WP_015877857.1;Parent=gene-NIV78_RS19425;Dbxref=Genbank:WP_015877857.1;Name=WP_015877857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877857.1;locus_tag=NIV78_RS19425;product=ABC transporter permease;protein_id=WP_015877857.1;transl_table=11 NZ_CP100137.1 RefSeq gene 509161 510711 . - . ID=gene-NIV78_RS19430;Name=gguA;gbkey=Gene;gene=gguA;gene_biotype=protein_coding;locus_tag=NIV78_RS19430 NZ_CP100137.1 Protein Homology CDS 509161 510711 . - 0 ID=cds-WP_015877856.1;Parent=gene-NIV78_RS19430;Dbxref=Genbank:WP_015877856.1;Name=WP_015877856.1;Ontology_term=GO:0043190;gbkey=CDS;gene=gguA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877856.1;locus_tag=NIV78_RS19430;product=sugar ABC transporter ATP-binding protein;protein_id=WP_015877856.1;transl_table=11 NZ_CP100137.1 RefSeq gene 510942 511652 . + . ID=gene-NIV78_RS19435;Name=NIV78_RS19435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19435 NZ_CP100137.1 Protein Homology CDS 510942 511652 . + 0 ID=cds-WP_015877855.1;Parent=gene-NIV78_RS19435;Dbxref=Genbank:WP_015877855.1;Name=WP_015877855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877855.1;locus_tag=NIV78_RS19435;product=FadR family transcriptional regulator;protein_id=WP_015877855.1;transl_table=11 NZ_CP100137.1 RefSeq gene 511731 513152 . - . ID=gene-NIV78_RS19440;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=NIV78_RS19440 NZ_CP100137.1 Protein Homology CDS 511731 513152 . - 0 ID=cds-WP_015877854.1;Parent=gene-NIV78_RS19440;Dbxref=Genbank:WP_015877854.1;Name=WP_015877854.1;Ontology_term=GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877854.1;locus_tag=NIV78_RS19440;product=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming);protein_id=WP_015877854.1;transl_table=11 NZ_CP100137.1 RefSeq gene 513719 514150 . + . ID=gene-NIV78_RS19445;Name=NIV78_RS19445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19445 NZ_CP100137.1 Protein Homology CDS 513719 514150 . + 0 ID=cds-WP_015877853.1;Parent=gene-NIV78_RS19445;Dbxref=Genbank:WP_015877853.1;Name=WP_015877853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026314.1;locus_tag=NIV78_RS19445;product=Hsp20/alpha crystallin family protein;protein_id=WP_015877853.1;transl_table=11 NZ_CP100137.1 RefSeq gene 514183 514596 . + . ID=gene-NIV78_RS19450;Name=NIV78_RS19450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19450 NZ_CP100137.1 Protein Homology CDS 514183 514596 . + 0 ID=cds-WP_015877852.1;Parent=gene-NIV78_RS19450;Dbxref=Genbank:WP_015877852.1;Name=WP_015877852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877852.1;locus_tag=NIV78_RS19450;product=Hsp20/alpha crystallin family protein;protein_id=WP_015877852.1;transl_table=11 NZ_CP100137.1 RefSeq gene 514735 515502 . - . ID=gene-NIV78_RS19455;Name=madM;gbkey=Gene;gene=madM;gene_biotype=protein_coding;locus_tag=NIV78_RS19455 NZ_CP100137.1 Protein Homology CDS 514735 515502 . - 0 ID=cds-WP_015877851.1;Parent=gene-NIV78_RS19455;Dbxref=Genbank:WP_015877851.1;Name=WP_015877851.1;Ontology_term=GO:0015849,GO:0005342;gbkey=CDS;gene=madM;go_function=organic acid transmembrane transporter activity|0005342||IEA;go_process=organic acid transport|0015849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004550661.1;locus_tag=NIV78_RS19455;product=malonate transporter subunit MadM;protein_id=WP_015877851.1;transl_table=11 NZ_CP100137.1 RefSeq gene 515515 515898 . - . ID=gene-NIV78_RS19460;Name=madL;gbkey=Gene;gene=madL;gene_biotype=protein_coding;locus_tag=NIV78_RS19460 NZ_CP100137.1 Protein Homology CDS 515515 515898 . - 0 ID=cds-WP_015877850.1;Parent=gene-NIV78_RS19460;Dbxref=Genbank:WP_015877850.1;Name=WP_015877850.1;Ontology_term=GO:0015849,GO:0005342;gbkey=CDS;gene=madL;go_function=organic acid transmembrane transporter activity|0005342||IEA;go_process=organic acid transport|0015849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877850.1;locus_tag=NIV78_RS19460;product=malonate transporter subunit MadL;protein_id=WP_015877850.1;transl_table=11 NZ_CP100137.1 RefSeq gene 516458 518086 . - . ID=gene-NIV78_RS19465;Name=NIV78_RS19465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19465 NZ_CP100137.1 GeneMarkS-2+ CDS 516458 518086 . - 0 ID=cds-WP_153479089.1;Parent=gene-NIV78_RS19465;Dbxref=Genbank:WP_153479089.1;Name=WP_153479089.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS19465;product=hypothetical protein;protein_id=WP_153479089.1;transl_table=11 NZ_CP100137.1 RefSeq gene 518334 518975 . - . ID=gene-NIV78_RS19470;Name=NIV78_RS19470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19470 NZ_CP100137.1 Protein Homology CDS 518334 518975 . - 0 ID=cds-WP_100556440.1;Parent=gene-NIV78_RS19470;Dbxref=Genbank:WP_100556440.1;Name=WP_100556440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011488402.1;locus_tag=NIV78_RS19470;product=DUF1109 domain-containing protein;protein_id=WP_100556440.1;transl_table=11 NZ_CP100137.1 RefSeq gene 518972 519544 . - . ID=gene-NIV78_RS19475;Name=NIV78_RS19475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19475 NZ_CP100137.1 Protein Homology CDS 518972 519544 . - 0 ID=cds-WP_017425031.1;Parent=gene-NIV78_RS19475;Dbxref=Genbank:WP_017425031.1;Name=WP_017425031.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425031.1;locus_tag=NIV78_RS19475;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_017425031.1;transl_table=11 NZ_CP100137.1 RefSeq gene 520083 522125 . - . ID=gene-NIV78_RS19480;Name=NIV78_RS19480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19480 NZ_CP100137.1 Protein Homology CDS 520083 522125 . - 0 ID=cds-WP_257757806.1;Parent=gene-NIV78_RS19480;Dbxref=Genbank:WP_257757806.1;Name=WP_257757806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877846.1;locus_tag=NIV78_RS19480;product=histidine kinase;protein_id=WP_257757806.1;transl_table=11 NZ_CP100137.1 RefSeq gene 522140 522856 . - . ID=gene-NIV78_RS19485;Name=NIV78_RS19485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19485 NZ_CP100137.1 Protein Homology CDS 522140 522856 . - 0 ID=cds-WP_100556442.1;Parent=gene-NIV78_RS19485;Dbxref=Genbank:WP_100556442.1;Name=WP_100556442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877845.1;locus_tag=NIV78_RS19485;product=response regulator transcription factor;protein_id=WP_100556442.1;transl_table=11 NZ_CP100137.1 RefSeq gene 523046 523411 . - . ID=gene-NIV78_RS19490;Name=NIV78_RS19490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19490 NZ_CP100137.1 Protein Homology CDS 523046 523411 . - 0 ID=cds-WP_017925059.1;Parent=gene-NIV78_RS19490;Dbxref=Genbank:WP_017925059.1;Name=WP_017925059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877844.1;locus_tag=NIV78_RS19490;product=DUF4180 domain-containing protein;protein_id=WP_017925059.1;transl_table=11 NZ_CP100137.1 RefSeq gene 523458 523832 . - . ID=gene-NIV78_RS19495;Name=NIV78_RS19495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19495 NZ_CP100137.1 Protein Homology CDS 523458 523832 . - 0 ID=cds-WP_015877843.1;Parent=gene-NIV78_RS19495;Dbxref=Genbank:WP_015877843.1;Name=WP_015877843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691168.1;locus_tag=NIV78_RS19495;product=hypothetical protein;protein_id=WP_015877843.1;transl_table=11 NZ_CP100137.1 RefSeq gene 524274 525032 . + . ID=gene-NIV78_RS19500;Name=NIV78_RS19500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19500 NZ_CP100137.1 Protein Homology CDS 524274 525032 . + 0 ID=cds-WP_017924887.1;Parent=gene-NIV78_RS19500;Dbxref=Genbank:WP_017924887.1;Name=WP_017924887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349954.1;locus_tag=NIV78_RS19500;product=ABC transporter substrate-binding protein;protein_id=WP_017924887.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 525161 525274 . - . ID=gene-NIV78_RS19505;Name=NIV78_RS19505;end_range=525274,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS19505;partial=true;pseudo=true;start_range=.,525161 NZ_CP100137.1 Protein Homology CDS 525161 525274 . - 0 ID=cds-NIV78_RS19505;Parent=gene-NIV78_RS19505;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=525274,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339593.1;locus_tag=NIV78_RS19505;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,525161;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 525297 525524 . + . ID=gene-NIV78_RS19510;Name=NIV78_RS19510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS19510;partial=true;pseudo=true;start_range=.,525297 NZ_CP100137.1 Protein Homology CDS 525297 525524 . + 0 ID=cds-NIV78_RS19510;Parent=gene-NIV78_RS19510;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007176061.1;locus_tag=NIV78_RS19510;partial=true;product=aspartate aminotransferase family protein;pseudo=true;start_range=.,525297;transl_table=11 NZ_CP100137.1 RefSeq gene 525690 526121 . - . ID=gene-NIV78_RS19515;Name=NIV78_RS19515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19515 NZ_CP100137.1 Protein Homology CDS 525690 526121 . - 0 ID=cds-WP_015877842.1;Parent=gene-NIV78_RS19515;Dbxref=Genbank:WP_015877842.1;Name=WP_015877842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877842.1;locus_tag=NIV78_RS19515;product=organic hydroperoxide resistance protein;protein_id=WP_015877842.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 526447 527063 . + . ID=gene-NIV78_RS19520;Name=NIV78_RS19520;end_range=527063,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS19520;partial=true;pseudo=true NZ_CP100137.1 Protein Homology CDS 526447 527063 . + 0 ID=cds-NIV78_RS19520;Parent=gene-NIV78_RS19520;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=527063,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367108.1;locus_tag=NIV78_RS19520;partial=true;product=pyridoxal-phosphate dependent enzyme;pseudo=true;transl_table=11 NZ_CP100137.1 RefSeq gene 527182 527583 . + . ID=gene-NIV78_RS19525;Name=NIV78_RS19525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19525 NZ_CP100137.1 Protein Homology CDS 527182 527583 . + 0 ID=cds-WP_251107754.1;Parent=gene-NIV78_RS19525;Dbxref=Genbank:WP_251107754.1;Name=WP_251107754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008919003.1;locus_tag=NIV78_RS19525;product=DUF3597 family protein;protein_id=WP_251107754.1;transl_table=11 NZ_CP100137.1 RefSeq gene 527755 529341 . - . ID=gene-NIV78_RS19530;Name=NIV78_RS19530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19530 NZ_CP100137.1 Protein Homology CDS 527755 529341 . - 0 ID=cds-WP_015877840.1;Parent=gene-NIV78_RS19530;Dbxref=Genbank:WP_015877840.1;Name=WP_015877840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877840.1;locus_tag=NIV78_RS19530;product=aldehyde dehydrogenase (NADP(+));protein_id=WP_015877840.1;transl_table=11 NZ_CP100137.1 RefSeq gene 529725 530483 . + . ID=gene-NIV78_RS19535;Name=NIV78_RS19535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19535 NZ_CP100137.1 Protein Homology CDS 529725 530483 . + 0 ID=cds-WP_015877839.1;Parent=gene-NIV78_RS19535;Dbxref=Genbank:WP_015877839.1;Name=WP_015877839.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691139.1;locus_tag=NIV78_RS19535;product=SDR family oxidoreductase;protein_id=WP_015877839.1;transl_table=11 NZ_CP100137.1 RefSeq gene 530984 532015 . - . ID=gene-NIV78_RS19540;Name=NIV78_RS19540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19540 NZ_CP100137.1 Protein Homology CDS 530984 532015 . - 0 ID=cds-WP_251107756.1;Parent=gene-NIV78_RS19540;Dbxref=Genbank:WP_251107756.1;Name=WP_251107756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877838.1;locus_tag=NIV78_RS19540;product=helix-turn-helix domain-containing protein;protein_id=WP_251107756.1;transl_table=11 NZ_CP100137.1 RefSeq gene 532506 534029 . + . ID=gene-NIV78_RS19545;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=NIV78_RS19545 NZ_CP100137.1 Protein Homology CDS 532506 534029 . + 0 ID=cds-WP_232734603.1;Parent=gene-NIV78_RS19545;Dbxref=Genbank:WP_232734603.1;Name=WP_232734603.1;Ontology_term=GO:0055085,GO:0022857,GO:0016021;gbkey=CDS;gene=proP;go_component=integral component of membrane|0016021||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372234.1;locus_tag=NIV78_RS19545;product=glycine betaine/L-proline transporter ProP;protein_id=WP_232734603.1;transl_table=11 NZ_CP100137.1 RefSeq gene 534195 534506 . + . ID=gene-NIV78_RS19550;Name=NIV78_RS19550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19550 NZ_CP100137.1 GeneMarkS-2+ CDS 534195 534506 . + 0 ID=cds-WP_017433466.1;Parent=gene-NIV78_RS19550;Dbxref=Genbank:WP_017433466.1;Name=WP_017433466.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS19550;product=hypothetical protein;protein_id=WP_017433466.1;transl_table=11 NZ_CP100137.1 RefSeq gene 534835 535476 . + . ID=gene-NIV78_RS19555;Name=NIV78_RS19555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19555 NZ_CP100137.1 Protein Homology CDS 534835 535476 . + 0 ID=cds-WP_017923622.1;Parent=gene-NIV78_RS19555;Dbxref=Genbank:WP_017923622.1;Name=WP_017923622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877836.1;locus_tag=NIV78_RS19555;product=YukJ family protein;protein_id=WP_017923622.1;transl_table=11 NZ_CP100137.1 RefSeq gene 536184 537332 . + . ID=gene-NIV78_RS19560;Name=NIV78_RS19560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19560 NZ_CP100137.1 Protein Homology CDS 536184 537332 . + 0 ID=cds-WP_161521560.1;Parent=gene-NIV78_RS19560;Dbxref=Genbank:WP_161521560.1;Name=WP_161521560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877835.1;locus_tag=NIV78_RS19560;product=asparaginase;protein_id=WP_161521560.1;transl_table=11 NZ_CP100137.1 RefSeq gene 537486 537803 . + . ID=gene-NIV78_RS19565;Name=NIV78_RS19565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19565 NZ_CP100137.1 Protein Homology CDS 537486 537803 . + 0 ID=cds-WP_017923624.1;Parent=gene-NIV78_RS19565;Dbxref=Genbank:WP_017923624.1;Name=WP_017923624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877834.1;locus_tag=NIV78_RS19565;product=hypothetical protein;protein_id=WP_017923624.1;transl_table=11 NZ_CP100137.1 RefSeq gene 538100 539677 . + . ID=gene-NIV78_RS19570;Name=NIV78_RS19570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19570 NZ_CP100137.1 Protein Homology CDS 538100 539677 . + 0 ID=cds-WP_124837437.1;Parent=gene-NIV78_RS19570;Dbxref=Genbank:WP_124837437.1;Name=WP_124837437.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877833.1;locus_tag=NIV78_RS19570;product=methyl-accepting chemotaxis protein;protein_id=WP_124837437.1;transl_table=11 NZ_CP100137.1 RefSeq gene 539822 540736 . - . ID=gene-NIV78_RS19575;Name=NIV78_RS19575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19575 NZ_CP100137.1 Protein Homology CDS 539822 540736 . - 0 ID=cds-WP_017923645.1;Parent=gene-NIV78_RS19575;Dbxref=Genbank:WP_017923645.1;Name=WP_017923645.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010108377.1;locus_tag=NIV78_RS19575;product=glutaminase;protein_id=WP_017923645.1;transl_table=11 NZ_CP100137.1 RefSeq gene 541096 541803 . + . ID=gene-NIV78_RS19580;Name=NIV78_RS19580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19580 NZ_CP100137.1 Protein Homology CDS 541096 541803 . + 0 ID=cds-WP_017923644.1;Parent=gene-NIV78_RS19580;Dbxref=Genbank:WP_017923644.1;Name=WP_017923644.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898667.1;locus_tag=NIV78_RS19580;product=response regulator;protein_id=WP_017923644.1;transl_table=11 NZ_CP100137.1 RefSeq gene 541790 542944 . + . ID=gene-NIV78_RS19585;Name=NIV78_RS19585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19585 NZ_CP100137.1 Protein Homology CDS 541790 542944 . + 0 ID=cds-WP_015877830.1;Parent=gene-NIV78_RS19585;Dbxref=Genbank:WP_015877830.1;Name=WP_015877830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877830.1;locus_tag=NIV78_RS19585;product=ATP-binding protein;protein_id=WP_015877830.1;transl_table=11 NZ_CP100137.1 RefSeq gene 543012 545630 . - . ID=gene-NIV78_RS19590;Name=NIV78_RS19590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19590 NZ_CP100137.1 Protein Homology CDS 543012 545630 . - 0 ID=cds-WP_257757811.1;Parent=gene-NIV78_RS19590;Dbxref=Genbank:WP_257757811.1;Name=WP_257757811.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877829.1;locus_tag=NIV78_RS19590;product=patatin-like phospholipase family protein;protein_id=WP_257757811.1;transl_table=11 NZ_CP100137.1 RefSeq gene 545938 546960 . + . ID=gene-NIV78_RS19595;Name=NIV78_RS19595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19595 NZ_CP100137.1 Protein Homology CDS 545938 546960 . + 0 ID=cds-WP_251107928.1;Parent=gene-NIV78_RS19595;Dbxref=Genbank:WP_251107928.1;Name=WP_251107928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691110.1;locus_tag=NIV78_RS19595;product=rod shape-determining protein MreB;protein_id=WP_251107928.1;transl_table=11 NZ_CP100137.1 RefSeq gene 547170 549437 . + . ID=gene-NIV78_RS19600;Name=NIV78_RS19600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19600 NZ_CP100137.1 Protein Homology CDS 547170 549437 . + 0 ID=cds-WP_257757812.1;Parent=gene-NIV78_RS19600;Dbxref=Genbank:WP_257757812.1;Name=WP_257757812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009975753.1;locus_tag=NIV78_RS19600;product=amylo-alpha-1%2C6-glucosidase;protein_id=WP_257757812.1;transl_table=11 NZ_CP100137.1 RefSeq gene 549605 549871 . + . ID=gene-NIV78_RS19605;Name=NIV78_RS19605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19605 NZ_CP100137.1 Protein Homology CDS 549605 549871 . + 0 ID=cds-WP_015877826.1;Parent=gene-NIV78_RS19605;Dbxref=Genbank:WP_015877826.1;Name=WP_015877826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354368.1;locus_tag=NIV78_RS19605;product=hypothetical protein;protein_id=WP_015877826.1;transl_table=11 NZ_CP100137.1 RefSeq gene 551410 552270 . + . ID=gene-NIV78_RS19610;Name=NIV78_RS19610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19610 NZ_CP100137.1 Protein Homology CDS 551410 552270 . + 0 ID=cds-WP_043227115.1;Parent=gene-NIV78_RS19610;Dbxref=Genbank:WP_043227115.1;Name=WP_043227115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877825.1;locus_tag=NIV78_RS19610;product=MurR/RpiR family transcriptional regulator;protein_id=WP_043227115.1;transl_table=11 NZ_CP100137.1 RefSeq gene 552664 552927 . + . ID=gene-NIV78_RS19615;Name=NIV78_RS19615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19615 NZ_CP100137.1 Protein Homology CDS 552664 552927 . + 0 ID=cds-WP_015877824.1;Parent=gene-NIV78_RS19615;Dbxref=Genbank:WP_015877824.1;Name=WP_015877824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877824.1;locus_tag=NIV78_RS19615;product=YodC family protein;protein_id=WP_015877824.1;transl_table=11 NZ_CP100137.1 RefSeq gene 553328 553651 . - . ID=gene-NIV78_RS19620;Name=NIV78_RS19620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19620 NZ_CP100137.1 Protein Homology CDS 553328 553651 . - 0 ID=cds-WP_015877823.1;Parent=gene-NIV78_RS19620;Dbxref=Genbank:WP_015877823.1;Name=WP_015877823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877823.1;locus_tag=NIV78_RS19620;product=superinfection immunity protein;protein_id=WP_015877823.1;transl_table=11 NZ_CP100137.1 RefSeq gene 553774 554169 . - . ID=gene-NIV78_RS19625;Name=NIV78_RS19625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19625 NZ_CP100137.1 Protein Homology CDS 553774 554169 . - 0 ID=cds-WP_015877822.1;Parent=gene-NIV78_RS19625;Dbxref=Genbank:WP_015877822.1;Name=WP_015877822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877822.1;locus_tag=NIV78_RS19625;product=rhodanese-like domain-containing protein;protein_id=WP_015877822.1;transl_table=11 NZ_CP100137.1 RefSeq gene 554282 555238 . + . ID=gene-NIV78_RS19630;Name=ftrA;gbkey=Gene;gene=ftrA;gene_biotype=protein_coding;locus_tag=NIV78_RS19630 NZ_CP100137.1 Protein Homology CDS 554282 555238 . + 0 ID=cds-WP_017424178.1;Parent=gene-NIV78_RS19630;Dbxref=Genbank:WP_017424178.1;Name=WP_017424178.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=ftrA;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877821.1;locus_tag=NIV78_RS19630;product=transcriptional regulator FtrA;protein_id=WP_017424178.1;transl_table=11 NZ_CP100137.1 RefSeq gene 555484 556935 . + . ID=gene-NIV78_RS19635;Name=NIV78_RS19635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19635 NZ_CP100137.1 Protein Homology CDS 555484 556935 . + 0 ID=cds-WP_043226404.1;Parent=gene-NIV78_RS19635;Dbxref=Genbank:WP_043226404.1;Name=WP_043226404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757485.1;locus_tag=NIV78_RS19635;product=M20 family metallopeptidase;protein_id=WP_043226404.1;transl_table=11 NZ_CP100137.1 RefSeq gene 557038 557256 . + . ID=gene-NIV78_RS19640;Name=NIV78_RS19640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19640 NZ_CP100137.1 Protein Homology CDS 557038 557256 . + 0 ID=cds-WP_015877819.1;Parent=gene-NIV78_RS19640;Dbxref=Genbank:WP_015877819.1;Name=WP_015877819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366505.1;locus_tag=NIV78_RS19640;product=DUF1653 domain-containing protein;protein_id=WP_015877819.1;transl_table=11 NZ_CP100137.1 RefSeq gene 557294 558514 . - . ID=gene-NIV78_RS19645;Name=NIV78_RS19645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19645 NZ_CP100137.1 Protein Homology CDS 557294 558514 . - 0 ID=cds-WP_017923674.1;Parent=gene-NIV78_RS19645;Dbxref=Genbank:WP_017923674.1;Name=WP_017923674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877818.1;locus_tag=NIV78_RS19645;product=winged helix DNA-binding domain-containing protein;protein_id=WP_017923674.1;transl_table=11 NZ_CP100137.1 RefSeq gene 558961 560358 . - . ID=gene-NIV78_RS19650;Name=NIV78_RS19650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19650 NZ_CP100137.1 Protein Homology CDS 558961 560358 . - 0 ID=cds-WP_015877817.1;Parent=gene-NIV78_RS19650;Dbxref=Genbank:WP_015877817.1;Name=WP_015877817.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004531607.1;locus_tag=NIV78_RS19650;product=MFS transporter;protein_id=WP_015877817.1;transl_table=11 NZ_CP100137.1 RefSeq gene 561022 562650 . + . ID=gene-NIV78_RS19655;Name=treA;gbkey=Gene;gene=treA;gene_biotype=protein_coding;locus_tag=NIV78_RS19655 NZ_CP100137.1 Protein Homology CDS 561022 562650 . + 0 ID=cds-WP_043224990.1;Parent=gene-NIV78_RS19655;Dbxref=Genbank:WP_043224990.1;Name=WP_043224990.1;Ontology_term=GO:0005991,GO:0004555;gbkey=CDS;gene=treA;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877816.1;locus_tag=NIV78_RS19655;product=alpha%2Calpha-trehalase TreA;protein_id=WP_043224990.1;transl_table=11 NZ_CP100137.1 RefSeq gene 562705 563106 . - . ID=gene-NIV78_RS19660;Name=NIV78_RS19660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19660 NZ_CP100137.1 Protein Homology CDS 562705 563106 . - 0 ID=cds-WP_015877815.1;Parent=gene-NIV78_RS19660;Dbxref=Genbank:WP_015877815.1;Name=WP_015877815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415618.1;locus_tag=NIV78_RS19660;product=winged helix-turn-helix domain-containing protein;protein_id=WP_015877815.1;transl_table=11 NZ_CP100137.1 RefSeq gene 563723 564088 . - . ID=gene-NIV78_RS19665;Name=NIV78_RS19665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19665 NZ_CP100137.1 Protein Homology CDS 563723 564088 . - 0 ID=cds-WP_015877814.1;Parent=gene-NIV78_RS19665;Dbxref=Genbank:WP_015877814.1;Name=WP_015877814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877814.1;locus_tag=NIV78_RS19665;product=DUF3564 domain-containing protein;protein_id=WP_015877814.1;transl_table=11 NZ_CP100137.1 RefSeq gene 564316 565590 . + . ID=gene-NIV78_RS19670;Name=NIV78_RS19670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19670 NZ_CP100137.1 Protein Homology CDS 564316 565590 . + 0 ID=cds-WP_017423477.1;Parent=gene-NIV78_RS19670;Dbxref=Genbank:WP_017423477.1;Name=WP_017423477.1;Ontology_term=GO:0006790,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009900818.1;locus_tag=NIV78_RS19670;product=SfnB family sulfur acquisition oxidoreductase;protein_id=WP_017423477.1;transl_table=11 NZ_CP100137.1 RefSeq gene 565755 566195 . - . ID=gene-NIV78_RS19675;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=NIV78_RS19675 NZ_CP100137.1 Protein Homology CDS 565755 566195 . - 0 ID=cds-WP_017922542.1;Parent=gene-NIV78_RS19675;Dbxref=Genbank:WP_017922542.1;Name=WP_017922542.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=hpaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423478.1;locus_tag=NIV78_RS19675;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=WP_017922542.1;transl_table=11 NZ_CP100137.1 RefSeq gene 566572 567441 . - . ID=gene-NIV78_RS19680;Name=NIV78_RS19680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19680 NZ_CP100137.1 Protein Homology CDS 566572 567441 . - 0 ID=cds-WP_015877811.1;Parent=gene-NIV78_RS19680;Dbxref=Genbank:WP_015877811.1;Name=WP_015877811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194630.1;locus_tag=NIV78_RS19680;product=MOSC N-terminal beta barrel domain-containing protein;protein_id=WP_015877811.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 567690 567847 . + . ID=gene-NIV78_RS19685;Name=NIV78_RS19685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS19685;partial=true;pseudo=true;start_range=.,567690 NZ_CP100137.1 Protein Homology CDS 567690 567847 . + 0 ID=cds-NIV78_RS19685;Parent=gene-NIV78_RS19685;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697547.1;locus_tag=NIV78_RS19685;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,567690;transl_table=11 NZ_CP100137.1 RefSeq gene 568089 577553 . + . ID=gene-NIV78_RS19690;Name=bcpA;gbkey=Gene;gene=bcpA;gene_biotype=protein_coding;gene_synonym=cdiA;locus_tag=NIV78_RS19690 NZ_CP100137.1 Protein Homology CDS 568089 577553 . + 0 ID=cds-WP_017922544.1;Parent=gene-NIV78_RS19690;Dbxref=Genbank:WP_017922544.1;Name=WP_017922544.1;gbkey=CDS;gene=bcpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877810.1;locus_tag=NIV78_RS19690;product=contact-dependent inhibition toxin BcpA;protein_id=WP_017922544.1;transl_table=11 NZ_CP100137.1 RefSeq gene 577555 578367 . + . ID=gene-NIV78_RS19695;Name=bcpI;gbkey=Gene;gene=bcpI;gene_biotype=protein_coding;gene_synonym=cdiI;locus_tag=NIV78_RS19695 NZ_CP100137.1 Protein Homology CDS 577555 578367 . + 0 ID=cds-WP_161521553.1;Parent=gene-NIV78_RS19695;Dbxref=Genbank:WP_161521553.1;Name=WP_161521553.1;gbkey=CDS;gene=bcpI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011402464.1;locus_tag=NIV78_RS19695;product=contact-dependent inhibition immunity protein BcpI;protein_id=WP_161521553.1;transl_table=11 NZ_CP100137.1 RefSeq gene 578437 578619 . + . ID=gene-NIV78_RS19700;Name=bcpO;gbkey=Gene;gene=bcpO;gene_biotype=protein_coding;locus_tag=NIV78_RS19700 NZ_CP100137.1 Protein Homology CDS 578437 578619 . + 0 ID=cds-WP_237657854.1;Parent=gene-NIV78_RS19700;Dbxref=Genbank:WP_237657854.1;Name=WP_237657854.1;gbkey=CDS;gene=bcpO;inference=COORDINATES: protein motif:HMM:NF037971.1;locus_tag=NIV78_RS19700;product=CDI system lipoprotein BcpO;protein_id=WP_237657854.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 578688 579188 . - . ID=gene-NIV78_RS19705;Name=NIV78_RS19705;end_range=579188,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS19705;partial=true;pseudo=true NZ_CP100137.1 Protein Homology CDS 578688 579188 . - 0 ID=cds-NIV78_RS19705;Parent=gene-NIV78_RS19705;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=579188,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405231.1;locus_tag=NIV78_RS19705;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;transl_table=11 NZ_CP100137.1 RefSeq gene 579599 580003 . + . ID=gene-NIV78_RS19710;Name=NIV78_RS19710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19710 NZ_CP100137.1 GeneMarkS-2+ CDS 579599 580003 . + 0 ID=cds-WP_257757813.1;Parent=gene-NIV78_RS19710;Dbxref=Genbank:WP_257757813.1;Name=WP_257757813.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS19710;product=hypothetical protein;protein_id=WP_257757813.1;transl_table=11 NZ_CP100137.1 RefSeq gene 580050 580253 . + . ID=gene-NIV78_RS19715;Name=NIV78_RS19715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19715 NZ_CP100137.1 Protein Homology CDS 580050 580253 . + 0 ID=cds-WP_015877807.1;Parent=gene-NIV78_RS19715;Dbxref=Genbank:WP_015877807.1;Name=WP_015877807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877807.1;locus_tag=NIV78_RS19715;product=hypothetical protein;protein_id=WP_015877807.1;transl_table=11 NZ_CP100137.1 RefSeq gene 580312 582051 . + . ID=gene-NIV78_RS19720;Name=NIV78_RS19720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19720 NZ_CP100137.1 Protein Homology CDS 580312 582051 . + 0 ID=cds-WP_017922547.1;Parent=gene-NIV78_RS19720;Dbxref=Genbank:WP_017922547.1;Name=WP_017922547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877806.1;locus_tag=NIV78_RS19720;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_017922547.1;transl_table=11 NZ_CP100137.1 RefSeq gene 582613 582822 . + . ID=gene-NIV78_RS19725;Name=NIV78_RS19725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19725 NZ_CP100137.1 Protein Homology CDS 582613 582822 . + 0 ID=cds-WP_241766781.1;Parent=gene-NIV78_RS19725;Dbxref=Genbank:WP_241766781.1;Name=WP_241766781.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017182.2;locus_tag=NIV78_RS19725;product=DUF746 domain-containing protein;protein_id=WP_241766781.1;transl_table=11 NZ_CP100137.1 RefSeq gene 583018 583704 . + . ID=gene-NIV78_RS19730;Name=NIV78_RS19730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19730 NZ_CP100137.1 Protein Homology CDS 583018 583704 . + 0 ID=cds-WP_017423485.1;Parent=gene-NIV78_RS19730;Dbxref=Genbank:WP_017423485.1;Name=WP_017423485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423485.1;locus_tag=NIV78_RS19730;product=CsgG/HfaB family protein;protein_id=WP_017423485.1;transl_table=11 NZ_CP100137.1 RefSeq gene 583755 584237 . + . ID=gene-NIV78_RS19735;Name=NIV78_RS19735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19735 NZ_CP100137.1 Protein Homology CDS 583755 584237 . + 0 ID=cds-WP_017922548.1;Parent=gene-NIV78_RS19735;Dbxref=Genbank:WP_017922548.1;Name=WP_017922548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423486.1;locus_tag=NIV78_RS19735;product=DUF4810 domain-containing protein;protein_id=WP_017922548.1;transl_table=11 NZ_CP100137.1 RefSeq gene 584250 584936 . + . ID=gene-NIV78_RS19740;Name=NIV78_RS19740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19740 NZ_CP100137.1 Protein Homology CDS 584250 584936 . + 0 ID=cds-WP_015877803.1;Parent=gene-NIV78_RS19740;Dbxref=Genbank:WP_015877803.1;Name=WP_015877803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202783.1;locus_tag=NIV78_RS19740;product=DUF799 domain-containing protein;protein_id=WP_015877803.1;transl_table=11 NZ_CP100137.1 RefSeq gene 584946 585763 . - . ID=gene-NIV78_RS19745;Name=NIV78_RS19745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19745 NZ_CP100137.1 Protein Homology CDS 585415 585763 . - 0 ID=cds-WP_257757507.1;Parent=gene-NIV78_RS19745;Dbxref=Genbank:WP_257757507.1;Name=WP_257757507.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS19745;product=IS5 family transposase;protein_id=WP_257757507.1;transl_table=11 NZ_CP100137.1 Protein Homology CDS 584946 585415 . - 2 ID=cds-WP_257757507.1;Parent=gene-NIV78_RS19745;Dbxref=Genbank:WP_257757507.1;Name=WP_257757507.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS19745;product=IS5 family transposase;protein_id=WP_257757507.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 585939 586435 . + . ID=gene-NIV78_RS19750;Name=NIV78_RS19750;end_range=586435,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS19750;partial=true;pseudo=true NZ_CP100137.1 Protein Homology CDS 585939 586435 . + 0 ID=cds-NIV78_RS19750;Parent=gene-NIV78_RS19750;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=586435,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492354.1;locus_tag=NIV78_RS19750;partial=true;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP100137.1 RefSeq gene 586635 586778 . - . ID=gene-NIV78_RS19755;Name=NIV78_RS19755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19755 NZ_CP100137.1 GeneMarkS-2+ CDS 586635 586778 . - 0 ID=cds-WP_241766953.1;Parent=gene-NIV78_RS19755;Dbxref=Genbank:WP_241766953.1;Name=WP_241766953.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS19755;product=hypothetical protein;protein_id=WP_241766953.1;transl_table=11 NZ_CP100137.1 RefSeq gene 586899 587147 . + . ID=gene-NIV78_RS19760;Name=NIV78_RS19760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19760 NZ_CP100137.1 GeneMarkS-2+ CDS 586899 587147 . + 0 ID=cds-WP_257757814.1;Parent=gene-NIV78_RS19760;Dbxref=Genbank:WP_257757814.1;Name=WP_257757814.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS19760;product=hypothetical protein;protein_id=WP_257757814.1;transl_table=11 NZ_CP100137.1 RefSeq gene 587144 587761 . + . ID=gene-NIV78_RS19765;Name=NIV78_RS19765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19765 NZ_CP100137.1 Protein Homology CDS 587144 587761 . + 0 ID=cds-WP_017924181.1;Parent=gene-NIV78_RS19765;Dbxref=Genbank:WP_017924181.1;Name=WP_017924181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877801.1;locus_tag=NIV78_RS19765;product=cysteine dioxygenase;protein_id=WP_017924181.1;transl_table=11 NZ_CP100137.1 RefSeq gene 587808 589568 . + . ID=gene-NIV78_RS19770;Name=NIV78_RS19770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19770 NZ_CP100137.1 Protein Homology CDS 587808 589568 . + 0 ID=cds-WP_251107759.1;Parent=gene-NIV78_RS19770;Dbxref=Genbank:WP_251107759.1;Name=WP_251107759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423490.1;locus_tag=NIV78_RS19770;product=rhodanese-like domain-containing protein;protein_id=WP_251107759.1;transl_table=11 NZ_CP100137.1 RefSeq gene 589556 590038 . - . ID=gene-NIV78_RS19775;Name=NIV78_RS19775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19775 NZ_CP100137.1 GeneMarkS-2+ CDS 589556 590038 . - 0 ID=cds-WP_157384180.1;Parent=gene-NIV78_RS19775;Dbxref=Genbank:WP_157384180.1;Name=WP_157384180.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS19775;product=hypothetical protein;protein_id=WP_157384180.1;transl_table=11 NZ_CP100137.1 RefSeq gene 590080 591282 . + . ID=gene-NIV78_RS19780;Name=NIV78_RS19780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19780 NZ_CP100137.1 Protein Homology CDS 590080 591282 . + 0 ID=cds-WP_017423491.1;Parent=gene-NIV78_RS19780;Dbxref=Genbank:WP_017423491.1;Name=WP_017423491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603285.1;locus_tag=NIV78_RS19780;product=porin;protein_id=WP_017423491.1;transl_table=11 NZ_CP100137.1 RefSeq gene 591594 591812 . - . ID=gene-NIV78_RS19785;Name=NIV78_RS19785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19785 NZ_CP100137.1 Protein Homology CDS 591594 591812 . - 0 ID=cds-WP_015877798.1;Parent=gene-NIV78_RS19785;Dbxref=Genbank:WP_015877798.1;Name=WP_015877798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691068.1;locus_tag=NIV78_RS19785;product=hypothetical protein;protein_id=WP_015877798.1;transl_table=11 NZ_CP100137.1 RefSeq gene 591812 592156 . - . ID=gene-NIV78_RS19790;Name=NIV78_RS19790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19790 NZ_CP100137.1 Protein Homology CDS 591812 592156 . - 0 ID=cds-WP_100556268.1;Parent=gene-NIV78_RS19790;Dbxref=Genbank:WP_100556268.1;Name=WP_100556268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877797.1;locus_tag=NIV78_RS19790;product=hypothetical protein;protein_id=WP_100556268.1;transl_table=11 NZ_CP100137.1 RefSeq gene 592594 593721 . - . ID=gene-NIV78_RS19795;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=NIV78_RS19795 NZ_CP100137.1 Protein Homology CDS 592594 593721 . - 0 ID=cds-WP_017924663.1;Parent=gene-NIV78_RS19795;Dbxref=Genbank:WP_017924663.1;Name=WP_017924663.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899697.1;locus_tag=NIV78_RS19795;product=alanine racemase;protein_id=WP_017924663.1;transl_table=11 NZ_CP100137.1 RefSeq gene 594271 594654 . + . ID=gene-NIV78_RS19800;Name=NIV78_RS19800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19800 NZ_CP100137.1 Protein Homology CDS 594271 594654 . + 0 ID=cds-WP_017924761.1;Parent=gene-NIV78_RS19800;Dbxref=Genbank:WP_017924761.1;Name=WP_017924761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877795.1;locus_tag=NIV78_RS19800;product=DUF427 domain-containing protein;protein_id=WP_017924761.1;transl_table=11 NZ_CP100137.1 RefSeq gene 594843 596090 . + . ID=gene-NIV78_RS19805;Name=egtB;gbkey=Gene;gene=egtB;gene_biotype=protein_coding;locus_tag=NIV78_RS19805 NZ_CP100137.1 Protein Homology CDS 594843 596090 . + 0 ID=cds-WP_161521550.1;Parent=gene-NIV78_RS19805;Dbxref=Genbank:WP_161521550.1;Name=WP_161521550.1;Ontology_term=GO:0052699;gbkey=CDS;gene=egtB;go_process=ergothioneine biosynthetic process|0052699||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009968000.1;locus_tag=NIV78_RS19805;product=ergothioneine biosynthesis protein EgtB;protein_id=WP_161521550.1;transl_table=11 NZ_CP100137.1 RefSeq gene 596092 597069 . + . ID=gene-NIV78_RS19810;Name=egtD;gbkey=Gene;gene=egtD;gene_biotype=protein_coding;locus_tag=NIV78_RS19810 NZ_CP100137.1 Protein Homology CDS 596092 597069 . + 0 ID=cds-WP_167343595.1;Parent=gene-NIV78_RS19810;Dbxref=Genbank:WP_167343595.1;Name=WP_167343595.1;Ontology_term=GO:0052699,GO:0030745;gbkey=CDS;gene=egtD;go_function=dimethylhistidine N-methyltransferase activity|0030745||IEA;go_process=ergothioneine biosynthetic process|0052699||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877793.1;locus_tag=NIV78_RS19810;product=L-histidine N(alpha)-methyltransferase;protein_id=WP_167343595.1;transl_table=11 NZ_CP100137.1 RefSeq gene 597220 597750 . - . ID=gene-NIV78_RS19815;Name=NIV78_RS19815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19815 NZ_CP100137.1 Protein Homology CDS 597220 597750 . - 0 ID=cds-WP_017923283.1;Parent=gene-NIV78_RS19815;Dbxref=Genbank:WP_017923283.1;Name=WP_017923283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877792.1;locus_tag=NIV78_RS19815;product=SCP2 sterol-binding domain-containing protein;protein_id=WP_017923283.1;transl_table=11 NZ_CP100137.1 RefSeq gene 597747 598649 . - . ID=gene-NIV78_RS19820;Name=NIV78_RS19820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19820 NZ_CP100137.1 Protein Homology CDS 597747 598649 . - 0 ID=cds-WP_051008382.1;Parent=gene-NIV78_RS19820;Dbxref=Genbank:WP_051008382.1;Name=WP_051008382.1;Ontology_term=GO:0006744;gbkey=CDS;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877791.1;locus_tag=NIV78_RS19820;product=U32 family peptidase;protein_id=WP_051008382.1;transl_table=11 NZ_CP100137.1 RefSeq gene 598658 599683 . - . ID=gene-NIV78_RS19825;Name=NIV78_RS19825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19825 NZ_CP100137.1 Protein Homology CDS 598658 599683 . - 0 ID=cds-WP_015877790.1;Parent=gene-NIV78_RS19825;Dbxref=Genbank:WP_015877790.1;Name=WP_015877790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424253.1;locus_tag=NIV78_RS19825;product=U32 family peptidase;protein_id=WP_015877790.1;transl_table=11 NZ_CP100137.1 RefSeq gene 600114 600443 . - . ID=gene-NIV78_RS19830;Name=NIV78_RS19830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19830 NZ_CP100137.1 GeneMarkS-2+ CDS 600114 600443 . - 0 ID=cds-WP_017432967.1;Parent=gene-NIV78_RS19830;Dbxref=Genbank:WP_017432967.1;Name=WP_017432967.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS19830;product=hypothetical protein;protein_id=WP_017432967.1;transl_table=11 NZ_CP100137.1 RefSeq gene 601151 601333 . + . ID=gene-NIV78_RS19835;Name=NIV78_RS19835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19835 NZ_CP100137.1 Protein Homology CDS 601151 601333 . + 0 ID=cds-WP_035982402.1;Parent=gene-NIV78_RS19835;Dbxref=Genbank:WP_035982402.1;Name=WP_035982402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003417044.1;locus_tag=NIV78_RS19835;product=rubredoxin;protein_id=WP_035982402.1;transl_table=11 NZ_CP100137.1 RefSeq gene 601590 602660 . + . ID=gene-NIV78_RS19840;Name=NIV78_RS19840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19840 NZ_CP100137.1 Protein Homology CDS 601590 602660 . + 0 ID=cds-WP_015877788.1;Parent=gene-NIV78_RS19840;Dbxref=Genbank:WP_015877788.1;Name=WP_015877788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004531636.1;locus_tag=NIV78_RS19840;product=AI-2E family transporter;protein_id=WP_015877788.1;transl_table=11 NZ_CP100137.1 RefSeq gene 602809 603165 . + . ID=gene-NIV78_RS19845;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=NIV78_RS19845 NZ_CP100137.1 Protein Homology CDS 602809 603165 . + 0 ID=cds-WP_015877787.1;Parent=gene-NIV78_RS19845;Dbxref=Genbank:WP_015877787.1;Name=WP_015877787.1;Ontology_term=GO:0019867;gbkey=CDS;gene=bamE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877787.1;locus_tag=NIV78_RS19845;product=outer membrane protein assembly factor BamE;protein_id=WP_015877787.1;transl_table=11 NZ_CP100137.1 RefSeq gene 603308 604102 . - . ID=gene-NIV78_RS19850;Name=NIV78_RS19850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19850 NZ_CP100137.1 Protein Homology CDS 603308 604102 . - 0 ID=cds-WP_017425238.1;Parent=gene-NIV78_RS19850;Dbxref=Genbank:WP_017425238.1;Name=WP_017425238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603553.1;locus_tag=NIV78_RS19850;product=SDR family oxidoreductase;protein_id=WP_017425238.1;transl_table=11 NZ_CP100137.1 RefSeq gene 604409 605899 . - . ID=gene-NIV78_RS19855;Name=NIV78_RS19855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19855 NZ_CP100137.1 Protein Homology CDS 604409 605899 . - 0 ID=cds-WP_251107760.1;Parent=gene-NIV78_RS19855;Dbxref=Genbank:WP_251107760.1;Name=WP_251107760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877785.1;locus_tag=NIV78_RS19855;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_251107760.1;transl_table=11 NZ_CP100137.1 RefSeq gene 606178 607206 . - . ID=gene-NIV78_RS19860;Name=NIV78_RS19860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19860 NZ_CP100137.1 Protein Homology CDS 606178 607206 . - 0 ID=cds-WP_251107930.1;Parent=gene-NIV78_RS19860;Dbxref=Genbank:WP_251107930.1;Name=WP_251107930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880868.1;locus_tag=NIV78_RS19860;product=hypothetical protein;protein_id=WP_251107930.1;transl_table=11 NZ_CP100137.1 RefSeq gene 607465 607725 . - . ID=gene-NIV78_RS19865;Name=NIV78_RS19865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19865 NZ_CP100137.1 Protein Homology CDS 607465 607725 . - 0 ID=cds-WP_017424850.1;Parent=gene-NIV78_RS19865;Dbxref=Genbank:WP_017424850.1;Name=WP_017424850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424850.1;locus_tag=NIV78_RS19865;product=hypothetical protein;protein_id=WP_017424850.1;transl_table=11 NZ_CP100137.1 RefSeq gene 608156 608842 . + . ID=gene-NIV78_RS19870;Name=NIV78_RS19870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19870 NZ_CP100137.1 GeneMarkS-2+ CDS 608156 608842 . + 0 ID=cds-WP_039203459.1;Parent=gene-NIV78_RS19870;Dbxref=Genbank:WP_039203459.1;Name=WP_039203459.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS19870;product=hypothetical protein;protein_id=WP_039203459.1;transl_table=11 NZ_CP100137.1 RefSeq gene 608871 609626 . - . ID=gene-NIV78_RS19875;Name=NIV78_RS19875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19875 NZ_CP100137.1 Protein Homology CDS 608871 609626 . - 0 ID=cds-WP_015877782.1;Parent=gene-NIV78_RS19875;Dbxref=Genbank:WP_015877782.1;Name=WP_015877782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877782.1;locus_tag=NIV78_RS19875;product=TerC family protein;protein_id=WP_015877782.1;transl_table=11 NZ_CP100137.1 RefSeq gene 609786 610664 . + . ID=gene-NIV78_RS19880;Name=NIV78_RS19880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19880 NZ_CP100137.1 Protein Homology CDS 609786 610664 . + 0 ID=cds-WP_015877781.1;Parent=gene-NIV78_RS19880;Dbxref=Genbank:WP_015877781.1;Name=WP_015877781.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424852.1;locus_tag=NIV78_RS19880;product=LysR family transcriptional regulator;protein_id=WP_015877781.1;transl_table=11 NZ_CP100137.1 cmsearch riboswitch 610816 610922 . + . ID=id-NZ_CP100137.1:610816..610922;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP100137.1 RefSeq gene 611002 611838 . + . ID=gene-NIV78_RS19885;Name=NIV78_RS19885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19885 NZ_CP100137.1 Protein Homology CDS 611002 611838 . + 0 ID=cds-WP_015877780.1;Parent=gene-NIV78_RS19885;Dbxref=Genbank:WP_015877780.1;Name=WP_015877780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004528326.1;locus_tag=NIV78_RS19885;product=DMT family transporter;protein_id=WP_015877780.1;transl_table=11 NZ_CP100137.1 RefSeq gene 611858 613051 . - . ID=gene-NIV78_RS19890;Name=NIV78_RS19890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19890 NZ_CP100137.1 Protein Homology CDS 611858 613051 . - 0 ID=cds-WP_232734577.1;Parent=gene-NIV78_RS19890;Dbxref=Genbank:WP_232734577.1;Name=WP_232734577.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424854.1;locus_tag=NIV78_RS19890;product=TauD/TfdA family dioxygenase;protein_id=WP_232734577.1;transl_table=11 NZ_CP100137.1 RefSeq gene 613062 613856 . - . ID=gene-NIV78_RS19895;Name=NIV78_RS19895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19895 NZ_CP100137.1 Protein Homology CDS 613062 613856 . - 0 ID=cds-WP_015877778.1;Parent=gene-NIV78_RS19895;Dbxref=Genbank:WP_015877778.1;Name=WP_015877778.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877778.1;locus_tag=NIV78_RS19895;product=methyltransferase domain-containing protein;protein_id=WP_015877778.1;transl_table=11 NZ_CP100137.1 RefSeq gene 614357 614836 . + . ID=gene-NIV78_RS19900;Name=NIV78_RS19900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19900 NZ_CP100137.1 Protein Homology CDS 614357 614836 . + 0 ID=cds-WP_015877777.1;Parent=gene-NIV78_RS19900;Dbxref=Genbank:WP_015877777.1;Name=WP_015877777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877777.1;locus_tag=NIV78_RS19900;product=NUDIX hydrolase;protein_id=WP_015877777.1;transl_table=11 NZ_CP100137.1 RefSeq gene 614833 615288 . + . ID=gene-NIV78_RS19905;Name=NIV78_RS19905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19905 NZ_CP100137.1 Protein Homology CDS 614833 615288 . + 0 ID=cds-WP_015877776.1;Parent=gene-NIV78_RS19905;Dbxref=Genbank:WP_015877776.1;Name=WP_015877776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877776.1;locus_tag=NIV78_RS19905;product=nucleoside 2-deoxyribosyltransferase;protein_id=WP_015877776.1;transl_table=11 NZ_CP100137.1 RefSeq gene 615291 616280 . + . ID=gene-NIV78_RS19910;Name=NIV78_RS19910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19910 NZ_CP100137.1 Protein Homology CDS 615291 616280 . + 0 ID=cds-WP_017923847.1;Parent=gene-NIV78_RS19910;Dbxref=Genbank:WP_017923847.1;Name=WP_017923847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877775.1;locus_tag=NIV78_RS19910;product=thymidylate synthase;protein_id=WP_017923847.1;transl_table=11 NZ_CP100137.1 RefSeq gene 616294 617043 . + . ID=gene-NIV78_RS19915;Name=NIV78_RS19915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19915 NZ_CP100137.1 Protein Homology CDS 616294 617043 . + 0 ID=cds-WP_017923848.1;Parent=gene-NIV78_RS19915;Dbxref=Genbank:WP_017923848.1;Name=WP_017923848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877774.1;locus_tag=NIV78_RS19915;product=class I SAM-dependent methyltransferase;protein_id=WP_017923848.1;transl_table=11 NZ_CP100137.1 RefSeq gene 617188 617985 . + . ID=gene-NIV78_RS19920;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=NIV78_RS19920 NZ_CP100137.1 Protein Homology CDS 617188 617985 . + 0 ID=cds-WP_015877773.1;Parent=gene-NIV78_RS19920;Dbxref=Genbank:WP_015877773.1;Name=WP_015877773.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016452346.1;locus_tag=NIV78_RS19920;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_015877773.1;transl_table=11 NZ_CP100137.1 RefSeq gene 618040 619464 . + . ID=gene-NIV78_RS19925;Name=bcmE;gbkey=Gene;gene=bcmE;gene_biotype=protein_coding;locus_tag=NIV78_RS19925 NZ_CP100137.1 Protein Homology CDS 618040 619464 . + 0 ID=cds-WP_015877772.1;Parent=gene-NIV78_RS19925;Dbxref=Genbank:WP_015877772.1;Name=WP_015877772.1;Ontology_term=GO:0009230,GO:0050332;gbkey=CDS;gene=bcmE;go_function=thiamine pyridinylase activity|0050332||IEA;go_process=thiamine catabolic process|0009230||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877772.1;locus_tag=NIV78_RS19925;product=thiamine pyridinylase;protein_id=WP_015877772.1;transl_table=11 NZ_CP100137.1 RefSeq gene 619518 620051 . - . ID=gene-NIV78_RS19930;Name=NIV78_RS19930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19930 NZ_CP100137.1 Protein Homology CDS 619518 620051 . - 0 ID=cds-WP_017424608.1;Parent=gene-NIV78_RS19930;Dbxref=Genbank:WP_017424608.1;Name=WP_017424608.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424608.1;locus_tag=NIV78_RS19930;product=flavin reductase;protein_id=WP_017424608.1;transl_table=11 NZ_CP100137.1 RefSeq gene 620230 621468 . - . ID=gene-NIV78_RS19935;Name=NIV78_RS19935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19935 NZ_CP100137.1 Protein Homology CDS 620230 621468 . - 0 ID=cds-WP_015877770.1;Parent=gene-NIV78_RS19935;Dbxref=Genbank:WP_015877770.1;Name=WP_015877770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877770.1;locus_tag=NIV78_RS19935;product=MFS transporter;protein_id=WP_015877770.1;transl_table=11 NZ_CP100137.1 RefSeq gene 621738 621814 . - . ID=gene-NIV78_RS19940;Name=NIV78_RS19940;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS19940 NZ_CP100137.1 tRNAscan-SE tRNA 621738 621814 . - . ID=rna-NIV78_RS19940;Parent=gene-NIV78_RS19940;anticodon=(pos:complement(621778..621780));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS19940;product=tRNA-Val NZ_CP100137.1 tRNAscan-SE exon 621738 621814 . - . ID=exon-NIV78_RS19940-1;Parent=rna-NIV78_RS19940;anticodon=(pos:complement(621778..621780));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS19940;product=tRNA-Val NZ_CP100137.1 RefSeq gene 621924 622000 . - . ID=gene-NIV78_RS19945;Name=NIV78_RS19945;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS19945 NZ_CP100137.1 tRNAscan-SE tRNA 621924 622000 . - . ID=rna-NIV78_RS19945;Parent=gene-NIV78_RS19945;anticodon=(pos:complement(621964..621966));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS19945;product=tRNA-Val NZ_CP100137.1 tRNAscan-SE exon 621924 622000 . - . ID=exon-NIV78_RS19945-1;Parent=rna-NIV78_RS19945;anticodon=(pos:complement(621964..621966));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS19945;product=tRNA-Val NZ_CP100137.1 RefSeq gene 622097 623005 . - . ID=gene-NIV78_RS19950;Name=NIV78_RS19950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19950 NZ_CP100137.1 Protein Homology CDS 622097 623005 . - 0 ID=cds-WP_015877769.1;Parent=gene-NIV78_RS19950;Dbxref=Genbank:WP_015877769.1;Name=WP_015877769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877769.1;locus_tag=NIV78_RS19950;product=LysR family transcriptional regulator;protein_id=WP_015877769.1;transl_table=11 NZ_CP100137.1 RefSeq gene 623135 623860 . + . ID=gene-NIV78_RS19955;Name=NIV78_RS19955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19955 NZ_CP100137.1 Protein Homology CDS 623135 623860 . + 0 ID=cds-WP_017423569.1;Parent=gene-NIV78_RS19955;Dbxref=Genbank:WP_017423569.1;Name=WP_017423569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525454.1;locus_tag=NIV78_RS19955;product=pirin family protein;protein_id=WP_017423569.1;transl_table=11 NZ_CP100137.1 RefSeq gene 624131 625420 . - . ID=gene-NIV78_RS19960;Name=NIV78_RS19960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19960 NZ_CP100137.1 Protein Homology CDS 624131 625420 . - 0 ID=cds-WP_017423570.1;Parent=gene-NIV78_RS19960;Dbxref=Genbank:WP_017423570.1;Name=WP_017423570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423570.1;locus_tag=NIV78_RS19960;product=NarK/NasA family nitrate transporter;protein_id=WP_017423570.1;transl_table=11 NZ_CP100137.1 RefSeq gene 625619 626302 . - . ID=gene-NIV78_RS19965;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=NIV78_RS19965 NZ_CP100137.1 Protein Homology CDS 625619 626302 . - 0 ID=cds-WP_017924276.1;Parent=gene-NIV78_RS19965;Dbxref=Genbank:WP_017924276.1;Name=WP_017924276.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691033.1;locus_tag=NIV78_RS19965;product=respiratory nitrate reductase subunit gamma;protein_id=WP_017924276.1;transl_table=11 NZ_CP100137.1 RefSeq gene 626299 627114 . - . ID=gene-NIV78_RS19970;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=NIV78_RS19970 NZ_CP100137.1 Protein Homology CDS 626299 627114 . - 0 ID=cds-WP_015877765.1;Parent=gene-NIV78_RS19970;Dbxref=Genbank:WP_015877765.1;Name=WP_015877765.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877765.1;locus_tag=NIV78_RS19970;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_015877765.1;transl_table=11 NZ_CP100137.1 RefSeq gene 627111 628649 . - . ID=gene-NIV78_RS19975;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=NIV78_RS19975 NZ_CP100137.1 Protein Homology CDS 627111 628649 . - 0 ID=cds-WP_015877764.1;Parent=gene-NIV78_RS19975;Dbxref=Genbank:WP_015877764.1;Name=WP_015877764.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877764.1;locus_tag=NIV78_RS19975;product=nitrate reductase subunit beta;protein_id=WP_015877764.1;transl_table=11 NZ_CP100137.1 RefSeq gene 628646 632443 . - . ID=gene-NIV78_RS19980;Name=NIV78_RS19980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19980 NZ_CP100137.1 Protein Homology CDS 628646 632443 . - 0 ID=cds-WP_169511193.1;Parent=gene-NIV78_RS19980;Dbxref=Genbank:WP_169511193.1;Name=WP_169511193.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424777.1;locus_tag=NIV78_RS19980;product=nitrate reductase subunit alpha;protein_id=WP_169511193.1;transl_table=11 NZ_CP100137.1 RefSeq gene 632880 634148 . - . ID=gene-NIV78_RS19985;Name=NIV78_RS19985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19985 NZ_CP100137.1 Protein Homology CDS 632880 634148 . - 0 ID=cds-WP_017424778.1;Parent=gene-NIV78_RS19985;Dbxref=Genbank:WP_017424778.1;Name=WP_017424778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424778.1;locus_tag=NIV78_RS19985;product=DUF1295 domain-containing protein;protein_id=WP_017424778.1;transl_table=11 NZ_CP100137.1 RefSeq gene 634252 636141 . - . ID=gene-NIV78_RS19990;Name=NIV78_RS19990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS19990 NZ_CP100137.1 Protein Homology CDS 634252 636141 . - 0 ID=cds-WP_257757822.1;Parent=gene-NIV78_RS19990;Dbxref=Genbank:WP_257757822.1;Name=WP_257757822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900242.1;locus_tag=NIV78_RS19990;product=collagen-like triple helix repeat-containing protein;protein_id=WP_257757822.1;transl_table=11 NZ_CP100137.1 RefSeq gene 636632 638038 . - . ID=gene-NIV78_RS19995;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=NIV78_RS19995 NZ_CP100137.1 Protein Homology CDS 636632 638038 . - 0 ID=cds-WP_015877760.1;Parent=gene-NIV78_RS19995;Dbxref=Genbank:WP_015877760.1;Name=WP_015877760.1;Ontology_term=GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877760.1;locus_tag=NIV78_RS19995;product=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming);protein_id=WP_015877760.1;transl_table=11 NZ_CP100137.1 RefSeq gene 638253 638639 . - . ID=gene-NIV78_RS20000;Name=NIV78_RS20000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20000 NZ_CP100137.1 Protein Homology CDS 638253 638639 . - 0 ID=cds-WP_015877759.1;Parent=gene-NIV78_RS20000;Dbxref=Genbank:WP_015877759.1;Name=WP_015877759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691026.1;locus_tag=NIV78_RS20000;product=hypothetical protein;protein_id=WP_015877759.1;transl_table=11 NZ_CP100137.1 RefSeq gene 638905 639363 . - . ID=gene-NIV78_RS20005;Name=NIV78_RS20005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20005 NZ_CP100137.1 Protein Homology CDS 638905 639363 . - 0 ID=cds-WP_015877758.1;Parent=gene-NIV78_RS20005;Dbxref=Genbank:WP_015877758.1;Name=WP_015877758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691025.1;locus_tag=NIV78_RS20005;product=zinc-finger-containing protein;protein_id=WP_015877758.1;transl_table=11 NZ_CP100137.1 RefSeq gene 639587 641116 . - . ID=gene-NIV78_RS20010;Name=NIV78_RS20010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20010 NZ_CP100137.1 Protein Homology CDS 639587 641116 . - 0 ID=cds-WP_015877757.1;Parent=gene-NIV78_RS20010;Dbxref=Genbank:WP_015877757.1;Name=WP_015877757.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877757.1;locus_tag=NIV78_RS20010;product=diguanylate cyclase;protein_id=WP_015877757.1;transl_table=11 NZ_CP100137.1 RefSeq gene 641329 642150 . - . ID=gene-NIV78_RS20015;Name=NIV78_RS20015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20015 NZ_CP100137.1 Protein Homology CDS 641329 642150 . - 0 ID=cds-WP_230674434.1;Parent=gene-NIV78_RS20015;Dbxref=Genbank:WP_230674434.1;Name=WP_230674434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691023.1;locus_tag=NIV78_RS20015;product=LysR substrate-binding domain-containing protein;protein_id=WP_230674434.1;transl_table=11 NZ_CP100137.1 RefSeq gene 642312 643520 . + . ID=gene-NIV78_RS20020;Name=NIV78_RS20020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20020 NZ_CP100137.1 Protein Homology CDS 642312 643520 . + 0 ID=cds-WP_017923484.1;Parent=gene-NIV78_RS20020;Dbxref=Genbank:WP_017923484.1;Name=WP_017923484.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877755.1;locus_tag=NIV78_RS20020;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_017923484.1;transl_table=11 NZ_CP100137.1 RefSeq gene 643577 643978 . - . ID=gene-NIV78_RS20025;Name=NIV78_RS20025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20025 NZ_CP100137.1 Protein Homology CDS 643577 643978 . - 0 ID=cds-WP_015877754.1;Parent=gene-NIV78_RS20025;Dbxref=Genbank:WP_015877754.1;Name=WP_015877754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877754.1;locus_tag=NIV78_RS20025;product=hypothetical protein;protein_id=WP_015877754.1;transl_table=11 NZ_CP100137.1 RefSeq gene 644177 645796 . + . ID=gene-NIV78_RS20030;Name=NIV78_RS20030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20030 NZ_CP100137.1 Protein Homology CDS 644177 645796 . + 0 ID=cds-WP_017923481.1;Parent=gene-NIV78_RS20030;Dbxref=Genbank:WP_017923481.1;Name=WP_017923481.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877753.1;locus_tag=NIV78_RS20030;product=methyl-accepting chemotaxis protein;protein_id=WP_017923481.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 645967 646914 . - . ID=gene-NIV78_RS20035;Name=NIV78_RS20035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS20035;partial=true;pseudo=true;start_range=.,645967 NZ_CP100137.1 Protein Homology CDS 645967 646914 . - 0 ID=cds-NIV78_RS20035;Parent=gene-NIV78_RS20035;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009898875.1;locus_tag=NIV78_RS20035;partial=true;product=alpha/beta hydrolase;pseudo=true;start_range=.,645967;transl_table=11 NZ_CP100137.1 RefSeq gene 646920 648569 . - . ID=gene-NIV78_RS20040;Name=NIV78_RS20040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20040 NZ_CP100137.1 Protein Homology CDS 646920 648569 . - 0 ID=cds-WP_017425160.1;Parent=gene-NIV78_RS20040;Dbxref=Genbank:WP_017425160.1;Name=WP_017425160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877751.1;locus_tag=NIV78_RS20040;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_017425160.1;transl_table=11 NZ_CP100137.1 RefSeq gene 648566 649471 . - . ID=gene-NIV78_RS20045;Name=NIV78_RS20045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20045 NZ_CP100137.1 Protein Homology CDS 648566 649471 . - 0 ID=cds-WP_017425159.1;Parent=gene-NIV78_RS20045;Dbxref=Genbank:WP_017425159.1;Name=WP_017425159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881431.1;locus_tag=NIV78_RS20045;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_017425159.1;transl_table=11 NZ_CP100137.1 RefSeq gene 649558 650262 . + . ID=gene-NIV78_RS20050;Name=NIV78_RS20050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20050 NZ_CP100137.1 Protein Homology CDS 649558 650262 . + 0 ID=cds-WP_017425158.1;Parent=gene-NIV78_RS20050;Dbxref=Genbank:WP_017425158.1;Name=WP_017425158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425158.1;locus_tag=NIV78_RS20050;product=TetR/AcrR family transcriptional regulator;protein_id=WP_017425158.1;transl_table=11 NZ_CP100137.1 RefSeq gene 650675 651064 . + . ID=gene-NIV78_RS20055;Name=NIV78_RS20055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20055 NZ_CP100137.1 Protein Homology CDS 650675 651064 . + 0 ID=cds-WP_015877748.1;Parent=gene-NIV78_RS20055;Dbxref=Genbank:WP_015877748.1;Name=WP_015877748.1;Ontology_term=GO:0009972,GO:0004126,GO:0008270;gbkey=CDS;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485641.1;locus_tag=NIV78_RS20055;product=cytidine deaminase;protein_id=WP_015877748.1;transl_table=11 NZ_CP100137.1 RefSeq gene 651092 651856 . - . ID=gene-NIV78_RS20060;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=NIV78_RS20060 NZ_CP100137.1 Protein Homology CDS 651092 651856 . - 0 ID=cds-WP_017424513.1;Parent=gene-NIV78_RS20060;Dbxref=Genbank:WP_017424513.1;Name=WP_017424513.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=fnr;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424513.1;locus_tag=NIV78_RS20060;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_017424513.1;transl_table=11 NZ_CP100137.1 RefSeq gene 651850 652266 . - . ID=gene-NIV78_RS20065;Name=NIV78_RS20065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20065 NZ_CP100137.1 Protein Homology CDS 651850 652266 . - 0 ID=cds-WP_015877746.1;Parent=gene-NIV78_RS20065;Dbxref=Genbank:WP_015877746.1;Name=WP_015877746.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877746.1;locus_tag=NIV78_RS20065;product=response regulator;protein_id=WP_015877746.1;transl_table=11 NZ_CP100137.1 RefSeq gene 652403 653035 . - . ID=gene-NIV78_RS20070;Name=NIV78_RS20070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20070 NZ_CP100137.1 Protein Homology CDS 652403 653035 . - 0 ID=cds-WP_015877745.1;Parent=gene-NIV78_RS20070;Dbxref=Genbank:WP_015877745.1;Name=WP_015877745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877745.1;locus_tag=NIV78_RS20070;product=PAS domain-containing protein;protein_id=WP_015877745.1;transl_table=11 NZ_CP100137.1 RefSeq gene 653253 654788 . + . ID=gene-NIV78_RS20075;Name=NIV78_RS20075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20075 NZ_CP100137.1 Protein Homology CDS 653253 654788 . + 0 ID=cds-WP_015877744.1;Parent=gene-NIV78_RS20075;Dbxref=Genbank:WP_015877744.1;Name=WP_015877744.1;Ontology_term=GO:0006865;gbkey=CDS;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877744.1;locus_tag=NIV78_RS20075;product=amino acid permease;protein_id=WP_015877744.1;transl_table=11 NZ_CP100137.1 RefSeq gene 655419 656135 . + . ID=gene-NIV78_RS20080;Name=NIV78_RS20080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20080 NZ_CP100137.1 Protein Homology CDS 655419 656135 . + 0 ID=cds-WP_015877743.1;Parent=gene-NIV78_RS20080;Dbxref=Genbank:WP_015877743.1;Name=WP_015877743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350236.1;locus_tag=NIV78_RS20080;product=ABC transporter permease;protein_id=WP_015877743.1;transl_table=11 NZ_CP100137.1 RefSeq gene 656132 657094 . + . ID=gene-NIV78_RS20085;Name=NIV78_RS20085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20085 NZ_CP100137.1 Protein Homology CDS 656132 657094 . + 0 ID=cds-WP_015877742.1;Parent=gene-NIV78_RS20085;Dbxref=Genbank:WP_015877742.1;Name=WP_015877742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877742.1;locus_tag=NIV78_RS20085;product=glycine betaine ABC transporter substrate-binding protein;protein_id=WP_015877742.1;transl_table=11 NZ_CP100137.1 RefSeq gene 657108 657761 . + . ID=gene-NIV78_RS20090;Name=NIV78_RS20090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20090 NZ_CP100137.1 Protein Homology CDS 657108 657761 . + 0 ID=cds-WP_015877741.1;Parent=gene-NIV78_RS20090;Dbxref=Genbank:WP_015877741.1;Name=WP_015877741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691010.1;locus_tag=NIV78_RS20090;product=ABC transporter permease;protein_id=WP_015877741.1;transl_table=11 NZ_CP100137.1 RefSeq gene 657758 658909 . + . ID=gene-NIV78_RS20095;Name=NIV78_RS20095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20095 NZ_CP100137.1 Protein Homology CDS 657758 658909 . + 0 ID=cds-WP_017424514.1;Parent=gene-NIV78_RS20095;Dbxref=Genbank:WP_017424514.1;Name=WP_017424514.1;Note=Members of the family are the ATP-binding subunit of ABC transporters for substrates such as betaine%2C L-proline or other amino acids%2C choline%2C carnitine%2C etc. The substrate specificity is best determined from the substrate-binding subunit%2C rather than this subunit%2C as it interacts with the permease subunit and not with substrate directly.;Ontology_term=GO:0015837,GO:0005524,GO:0009898,GO:0043190;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=amine transport|0015837||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877740.1;locus_tag=NIV78_RS20095;product=betaine/proline/choline family ABC transporter ATP-binding protein;protein_id=WP_017424514.1;transl_table=11 NZ_CP100137.1 RefSeq gene 658949 659134 . - . ID=gene-NIV78_RS20100;Name=NIV78_RS20100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20100 NZ_CP100137.1 Protein Homology CDS 658949 659134 . - 0 ID=cds-WP_017922607.1;Parent=gene-NIV78_RS20100;Dbxref=Genbank:WP_017922607.1;Name=WP_017922607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424515.1;locus_tag=NIV78_RS20100;product=hypothetical protein;protein_id=WP_017922607.1;transl_table=11 NZ_CP100137.1 RefSeq gene 659306 660346 . - . ID=gene-NIV78_RS20105;Name=NIV78_RS20105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20105 NZ_CP100137.1 Protein Homology CDS 659306 660346 . - 0 ID=cds-WP_043225050.1;Parent=gene-NIV78_RS20105;Dbxref=Genbank:WP_043225050.1;Name=WP_043225050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691007.1;locus_tag=NIV78_RS20105;product=AraC family transcriptional regulator;protein_id=WP_043225050.1;transl_table=11 NZ_CP100137.1 RefSeq gene 660466 662499 . + . ID=gene-NIV78_RS20110;Name=NIV78_RS20110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20110 NZ_CP100137.1 Protein Homology CDS 660466 662499 . + 0 ID=cds-WP_017922605.1;Parent=gene-NIV78_RS20110;Dbxref=Genbank:WP_017922605.1;Name=WP_017922605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004544654.1;locus_tag=NIV78_RS20110;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_017922605.1;transl_table=11 NZ_CP100137.1 RefSeq gene 663088 664641 . + . ID=gene-NIV78_RS20115;Name=NIV78_RS20115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20115 NZ_CP100137.1 Protein Homology CDS 663088 664641 . + 0 ID=cds-WP_015877737.1;Parent=gene-NIV78_RS20115;Dbxref=Genbank:WP_015877737.1;Name=WP_015877737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877737.1;locus_tag=NIV78_RS20115;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_015877737.1;transl_table=11 NZ_CP100137.1 RefSeq gene 664884 665774 . + . ID=gene-NIV78_RS20120;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=NIV78_RS20120 NZ_CP100137.1 Protein Homology CDS 664884 665774 . + 0 ID=cds-WP_015877736.1;Parent=gene-NIV78_RS20120;Dbxref=Genbank:WP_015877736.1;Name=WP_015877736.1;Ontology_term=GO:0015990,GO:0009486,GO:0016021;gbkey=CDS;gene=cyoA;go_component=integral component of membrane|0016021||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691004.1;locus_tag=NIV78_RS20120;product=ubiquinol oxidase subunit II;protein_id=WP_015877736.1;transl_table=11 NZ_CP100137.1 RefSeq gene 665777 667792 . + . ID=gene-NIV78_RS20125;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=NIV78_RS20125 NZ_CP100137.1 Protein Homology CDS 665777 667792 . + 0 ID=cds-WP_015877735.1;Parent=gene-NIV78_RS20125;Dbxref=Genbank:WP_015877735.1;Name=WP_015877735.1;Ontology_term=GO:0015990,GO:0009486,GO:0016021;gbkey=CDS;gene=cyoB;go_component=integral component of membrane|0016021||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331750.1;locus_tag=NIV78_RS20125;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_015877735.1;transl_table=11 NZ_CP100137.1 RefSeq gene 667792 668403 . + . ID=gene-NIV78_RS20130;Name=cyoC;gbkey=Gene;gene=cyoC;gene_biotype=protein_coding;locus_tag=NIV78_RS20130 NZ_CP100137.1 Protein Homology CDS 667792 668403 . + 0 ID=cds-WP_015877734.1;Parent=gene-NIV78_RS20130;Dbxref=Genbank:WP_015877734.1;Name=WP_015877734.1;Ontology_term=GO:0015990,GO:0009486,GO:0016021;gbkey=CDS;gene=cyoC;go_component=integral component of membrane|0016021||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600561.1;locus_tag=NIV78_RS20130;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_015877734.1;transl_table=11 NZ_CP100137.1 RefSeq gene 668404 668745 . + . ID=gene-NIV78_RS20135;Name=cyoD;gbkey=Gene;gene=cyoD;gene_biotype=protein_coding;locus_tag=NIV78_RS20135 NZ_CP100137.1 Protein Homology CDS 668404 668745 . + 0 ID=cds-WP_015877733.1;Parent=gene-NIV78_RS20135;Dbxref=Genbank:WP_015877733.1;Name=WP_015877733.1;Ontology_term=GO:0015990,GO:0009486,GO:0016021;gbkey=CDS;gene=cyoD;go_component=integral component of membrane|0016021||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352504.1;locus_tag=NIV78_RS20135;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_015877733.1;transl_table=11 NZ_CP100137.1 RefSeq gene 668847 669332 . - . ID=gene-NIV78_RS20140;Name=NIV78_RS20140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20140 NZ_CP100137.1 GeneMarkS-2+ CDS 668847 669332 . - 0 ID=cds-WP_198292407.1;Parent=gene-NIV78_RS20140;Dbxref=Genbank:WP_198292407.1;Name=WP_198292407.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS20140;product=hypothetical protein;protein_id=WP_198292407.1;transl_table=11 NZ_CP100137.1 RefSeq gene 669653 670390 . + . ID=gene-NIV78_RS20145;Name=NIV78_RS20145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20145 NZ_CP100137.1 Protein Homology CDS 669653 670390 . + 0 ID=cds-WP_015877731.1;Parent=gene-NIV78_RS20145;Dbxref=Genbank:WP_015877731.1;Name=WP_015877731.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425091.1;locus_tag=NIV78_RS20145;product=response regulator;protein_id=WP_015877731.1;transl_table=11 NZ_CP100137.1 RefSeq gene 670374 671621 . + . ID=gene-NIV78_RS20150;Name=NIV78_RS20150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20150 NZ_CP100137.1 Protein Homology CDS 670374 671621 . + 0 ID=cds-WP_015877730.1;Parent=gene-NIV78_RS20150;Dbxref=Genbank:WP_015877730.1;Name=WP_015877730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690999.1;locus_tag=NIV78_RS20150;product=ATP-binding protein;protein_id=WP_015877730.1;transl_table=11 NZ_CP100137.1 RefSeq gene 671721 672140 . + . ID=gene-NIV78_RS20155;Name=NIV78_RS20155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20155 NZ_CP100137.1 Protein Homology CDS 671721 672140 . + 0 ID=cds-WP_015877729.1;Parent=gene-NIV78_RS20155;Dbxref=Genbank:WP_015877729.1;Name=WP_015877729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877729.1;locus_tag=NIV78_RS20155;product=HIT family protein;protein_id=WP_015877729.1;transl_table=11 NZ_CP100137.1 RefSeq gene 672273 673904 . - . ID=gene-NIV78_RS20160;Name=NIV78_RS20160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20160 NZ_CP100137.1 Protein Homology CDS 672273 673904 . - 0 ID=cds-WP_251107763.1;Parent=gene-NIV78_RS20160;Dbxref=Genbank:WP_251107763.1;Name=WP_251107763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877728.1;locus_tag=NIV78_RS20160;product=phospholipase D-like domain-containing protein;protein_id=WP_251107763.1;transl_table=11 NZ_CP100137.1 RefSeq gene 674309 675598 . + . ID=gene-NIV78_RS20165;Name=NIV78_RS20165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20165 NZ_CP100137.1 Protein Homology CDS 674309 675598 . + 0 ID=cds-WP_015877727.1;Parent=gene-NIV78_RS20165;Dbxref=Genbank:WP_015877727.1;Name=WP_015877727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690986.1;locus_tag=NIV78_RS20165;product=DUF445 family protein;protein_id=WP_015877727.1;transl_table=11 NZ_CP100137.1 RefSeq gene 675724 677307 . + . ID=gene-NIV78_RS20170;Name=NIV78_RS20170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20170 NZ_CP100137.1 Protein Homology CDS 675724 677307 . + 0 ID=cds-WP_100556037.1;Parent=gene-NIV78_RS20170;Dbxref=Genbank:WP_100556037.1;Name=WP_100556037.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385;gbkey=CDS;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690985.1;locus_tag=NIV78_RS20170;product=Na+/H+ antiporter;protein_id=WP_100556037.1;transl_table=11 NZ_CP100137.1 RefSeq gene 677548 679188 . + . ID=gene-NIV78_RS20175;Name=NIV78_RS20175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20175 NZ_CP100137.1 Protein Homology CDS 677548 679188 . + 0 ID=cds-WP_017923256.1;Parent=gene-NIV78_RS20175;Dbxref=Genbank:WP_017923256.1;Name=WP_017923256.1;Ontology_term=GO:0000287,GO:0003824,GO:0030976;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,catalytic activity|0003824||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009978184.1;locus_tag=NIV78_RS20175;product=acetolactate synthase large subunit;protein_id=WP_017923256.1;transl_table=11 NZ_CP100137.1 RefSeq gene 679240 680676 . + . ID=gene-NIV78_RS20180;Name=NIV78_RS20180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20180 NZ_CP100137.1 Protein Homology CDS 679240 680676 . + 0 ID=cds-WP_251107764.1;Parent=gene-NIV78_RS20180;Dbxref=Genbank:WP_251107764.1;Name=WP_251107764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877724.1;locus_tag=NIV78_RS20180;product=aldehyde dehydrogenase family protein;protein_id=WP_251107764.1;transl_table=11 NZ_CP100137.1 RefSeq gene 681098 682195 . + . ID=gene-NIV78_RS20185;Name=NIV78_RS20185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20185 NZ_CP100137.1 Protein Homology CDS 681098 682195 . + 0 ID=cds-WP_257757824.1;Parent=gene-NIV78_RS20185;Dbxref=Genbank:WP_257757824.1;Name=WP_257757824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877723.1;locus_tag=NIV78_RS20185;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_257757824.1;transl_table=11 NZ_CP100137.1 RefSeq gene 682420 684099 . + . ID=gene-NIV78_RS20190;Name=NIV78_RS20190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20190 NZ_CP100137.1 Protein Homology CDS 682420 684099 . + 0 ID=cds-WP_015877722.1;Parent=gene-NIV78_RS20190;Dbxref=Genbank:WP_015877722.1;Name=WP_015877722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404210.1;locus_tag=NIV78_RS20190;product=methyl-accepting chemotaxis protein;protein_id=WP_015877722.1;transl_table=11 NZ_CP100137.1 RefSeq gene 684120 684635 . + . ID=gene-NIV78_RS20195;Name=NIV78_RS20195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20195 NZ_CP100137.1 Protein Homology CDS 684120 684635 . + 0 ID=cds-WP_017424250.1;Parent=gene-NIV78_RS20195;Dbxref=Genbank:WP_017424250.1;Name=WP_017424250.1;Ontology_term=GO:0006935,GO:0007165;gbkey=CDS;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877721.1;locus_tag=NIV78_RS20195;product=chemotaxis protein CheW;protein_id=WP_017424250.1;transl_table=11 NZ_CP100137.1 RefSeq gene 684632 686161 . + . ID=gene-NIV78_RS20200;Name=NIV78_RS20200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20200 NZ_CP100137.1 Protein Homology CDS 684632 686161 . + 0 ID=cds-WP_124837051.1;Parent=gene-NIV78_RS20200;Dbxref=Genbank:WP_124837051.1;Name=WP_124837051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877720.1;locus_tag=NIV78_RS20200;product=MCP methyltransferase;protein_id=WP_124837051.1;transl_table=11 NZ_CP100137.1 RefSeq gene 686145 686870 . + . ID=gene-NIV78_RS20205;Name=NIV78_RS20205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20205 NZ_CP100137.1 Protein Homology CDS 686145 686870 . + 0 ID=cds-WP_015877719.1;Parent=gene-NIV78_RS20205;Dbxref=Genbank:WP_015877719.1;Name=WP_015877719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690977.1;locus_tag=NIV78_RS20205;product=chemotaxis protein CheW;protein_id=WP_015877719.1;transl_table=11 NZ_CP100137.1 RefSeq gene 686867 689353 . + . ID=gene-NIV78_RS20210;Name=NIV78_RS20210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20210 NZ_CP100137.1 Protein Homology CDS 686867 689353 . + 0 ID=cds-WP_251107765.1;Parent=gene-NIV78_RS20210;Dbxref=Genbank:WP_251107765.1;Name=WP_251107765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877718.1;locus_tag=NIV78_RS20210;product=response regulator;protein_id=WP_251107765.1;transl_table=11 NZ_CP100137.1 RefSeq gene 689350 690375 . + . ID=gene-NIV78_RS20215;Name=NIV78_RS20215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20215 NZ_CP100137.1 Protein Homology CDS 689350 690375 . + 0 ID=cds-WP_015877717.1;Parent=gene-NIV78_RS20215;Dbxref=Genbank:WP_015877717.1;Name=WP_015877717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690975.1;locus_tag=NIV78_RS20215;product=chemotaxis response regulator protein-glutamate methylesterase;protein_id=WP_015877717.1;transl_table=11 NZ_CP100137.1 RefSeq gene 690565 692154 . + . ID=gene-NIV78_RS20220;Name=NIV78_RS20220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20220 NZ_CP100137.1 Protein Homology CDS 690565 692154 . + 0 ID=cds-WP_015877716.1;Parent=gene-NIV78_RS20220;Dbxref=Genbank:WP_015877716.1;Name=WP_015877716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877716.1;locus_tag=NIV78_RS20220;product=helix-turn-helix transcriptional regulator;protein_id=WP_015877716.1;transl_table=11 NZ_CP100137.1 RefSeq gene 692344 692529 . + . ID=gene-NIV78_RS20225;Name=NIV78_RS20225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20225 NZ_CP100137.1 Protein Homology CDS 692344 692529 . + 0 ID=cds-WP_015877715.1;Parent=gene-NIV78_RS20225;Dbxref=Genbank:WP_015877715.1;Name=WP_015877715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877715.1;locus_tag=NIV78_RS20225;product=CsbD family protein;protein_id=WP_015877715.1;transl_table=11 NZ_CP100137.1 cmsearch riboswitch 692711 692779 . + . ID=id-NZ_CP100137.1:692711..692779;Dbxref=RFAM:RF01734;Note=Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride%3B They are found in a wide variety of bacteria and archaea;bound_moiety=fluoride;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP100137.1 RefSeq gene 692863 694167 . + . ID=gene-NIV78_RS20230;Name=NIV78_RS20230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20230 NZ_CP100137.1 Protein Homology CDS 692863 694167 . + 0 ID=cds-WP_026051397.1;Parent=gene-NIV78_RS20230;Dbxref=Genbank:WP_026051397.1;Name=WP_026051397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877714.1;locus_tag=NIV78_RS20230;product=voltage-gated chloride channel family protein;protein_id=WP_026051397.1;transl_table=11 NZ_CP100137.1 RefSeq gene 694207 695166 . - . ID=gene-NIV78_RS20235;Name=NIV78_RS20235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20235 NZ_CP100137.1 Protein Homology CDS 694207 695166 . - 0 ID=cds-WP_017922961.1;Parent=gene-NIV78_RS20235;Dbxref=Genbank:WP_017922961.1;Name=WP_017922961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877713.1;locus_tag=NIV78_RS20235;product=LysR family transcriptional regulator;protein_id=WP_017922961.1;transl_table=11 NZ_CP100137.1 RefSeq gene 695337 696551 . + . ID=gene-NIV78_RS20240;Name=NIV78_RS20240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20240 NZ_CP100137.1 Protein Homology CDS 695337 696551 . + 0 ID=cds-WP_017922960.1;Parent=gene-NIV78_RS20240;Dbxref=Genbank:WP_017922960.1;Name=WP_017922960.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354836.1;locus_tag=NIV78_RS20240;product=FAD-dependent monooxygenase;protein_id=WP_017922960.1;transl_table=11 NZ_CP100137.1 RefSeq gene 696858 698114 . + . ID=gene-NIV78_RS20245;Name=NIV78_RS20245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20245 NZ_CP100137.1 Protein Homology CDS 696858 698114 . + 0 ID=cds-WP_236577909.1;Parent=gene-NIV78_RS20245;Dbxref=Genbank:WP_236577909.1;Name=WP_236577909.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877711.1;locus_tag=NIV78_RS20245;product=metallophosphoesterase;protein_id=WP_236577909.1;transl_table=11 NZ_CP100137.1 RefSeq gene 698118 699356 . + . ID=gene-NIV78_RS20250;Name=NIV78_RS20250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20250 NZ_CP100137.1 Protein Homology CDS 698118 699356 . + 0 ID=cds-WP_017922959.1;Parent=gene-NIV78_RS20250;Dbxref=Genbank:WP_017922959.1;Name=WP_017922959.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013590328.1;locus_tag=NIV78_RS20250;product=MFS transporter;protein_id=WP_017922959.1;transl_table=11 NZ_CP100137.1 RefSeq gene 699353 700606 . + . ID=gene-NIV78_RS20255;Name=NIV78_RS20255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20255 NZ_CP100137.1 Protein Homology CDS 699353 700606 . + 0 ID=cds-WP_015877709.1;Parent=gene-NIV78_RS20255;Dbxref=Genbank:WP_015877709.1;Name=WP_015877709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877709.1;locus_tag=NIV78_RS20255;product=arsenic transporter;protein_id=WP_015877709.1;transl_table=11 NZ_CP100137.1 RefSeq gene 700634 701080 . + . ID=gene-NIV78_RS20260;Name=NIV78_RS20260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20260 NZ_CP100137.1 Protein Homology CDS 700634 701080 . + 0 ID=cds-WP_015877708.1;Parent=gene-NIV78_RS20260;Dbxref=Genbank:WP_015877708.1;Name=WP_015877708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016348290.1;locus_tag=NIV78_RS20260;product=DMT family transporter;protein_id=WP_015877708.1;transl_table=11 NZ_CP100137.1 RefSeq gene 701250 702221 . - . ID=gene-NIV78_RS20265;Name=NIV78_RS20265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20265 NZ_CP100137.1 Protein Homology CDS 701250 702221 . - 0 ID=cds-WP_100556032.1;Parent=gene-NIV78_RS20265;Dbxref=Genbank:WP_100556032.1;Name=WP_100556032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877707.1;locus_tag=NIV78_RS20265;product=CPBP family intramembrane metalloprotease;protein_id=WP_100556032.1;transl_table=11 NZ_CP100137.1 RefSeq gene 702735 704636 . - . ID=gene-NIV78_RS20270;Name=NIV78_RS20270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20270 NZ_CP100137.1 Protein Homology CDS 702735 704636 . - 0 ID=cds-WP_017425192.1;Parent=gene-NIV78_RS20270;Dbxref=Genbank:WP_017425192.1;Name=WP_017425192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877706.1;locus_tag=NIV78_RS20270;product=ABC transporter ATP-binding protein/permease;protein_id=WP_017425192.1;transl_table=11 NZ_CP100137.1 RefSeq gene 705240 705644 . - . ID=gene-NIV78_RS20275;Name=NIV78_RS20275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20275 NZ_CP100137.1 Protein Homology CDS 705240 705644 . - 0 ID=cds-WP_015877705.1;Parent=gene-NIV78_RS20275;Dbxref=Genbank:WP_015877705.1;Name=WP_015877705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004529106.1;locus_tag=NIV78_RS20275;product=OsmC family protein;protein_id=WP_015877705.1;transl_table=11 NZ_CP100137.1 RefSeq gene 705789 706718 . - . ID=gene-NIV78_RS20280;Name=NIV78_RS20280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20280 NZ_CP100137.1 Protein Homology CDS 705789 706718 . - 0 ID=cds-WP_124837058.1;Parent=gene-NIV78_RS20280;Dbxref=Genbank:WP_124837058.1;Name=WP_124837058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877704.1;locus_tag=NIV78_RS20280;product=LysR family transcriptional regulator;protein_id=WP_124837058.1;transl_table=11 NZ_CP100137.1 RefSeq gene 706856 708097 . + . ID=gene-NIV78_RS20285;Name=NIV78_RS20285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20285 NZ_CP100137.1 Protein Homology CDS 706856 708097 . + 0 ID=cds-WP_017924163.1;Parent=gene-NIV78_RS20285;Dbxref=Genbank:WP_017924163.1;Name=WP_017924163.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877703.1;locus_tag=NIV78_RS20285;product=acyl-CoA dehydrogenase family protein;protein_id=WP_017924163.1;transl_table=11 NZ_CP100137.1 RefSeq gene 708094 709167 . + . ID=gene-NIV78_RS20290;Name=NIV78_RS20290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20290 NZ_CP100137.1 Protein Homology CDS 708094 709167 . + 0 ID=cds-WP_015877702.1;Parent=gene-NIV78_RS20290;Dbxref=Genbank:WP_015877702.1;Name=WP_015877702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877702.1;locus_tag=NIV78_RS20290;product=phosphotransferase family protein;protein_id=WP_015877702.1;transl_table=11 NZ_CP100137.1 RefSeq gene 709164 709889 . + . ID=gene-NIV78_RS20295;Name=NIV78_RS20295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20295 NZ_CP100137.1 Protein Homology CDS 709164 709889 . + 0 ID=cds-WP_100556031.1;Parent=gene-NIV78_RS20295;Dbxref=Genbank:WP_100556031.1;Name=WP_100556031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190271.1;locus_tag=NIV78_RS20295;product=histidine phosphatase family protein;protein_id=WP_100556031.1;transl_table=11 NZ_CP100137.1 RefSeq gene 709961 710731 . + . ID=gene-NIV78_RS20300;Name=NIV78_RS20300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20300 NZ_CP100137.1 Protein Homology CDS 709961 710731 . + 0 ID=cds-WP_017923293.1;Parent=gene-NIV78_RS20300;Dbxref=Genbank:WP_017923293.1;Name=WP_017923293.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009972255.1;locus_tag=NIV78_RS20300;product=SDR family oxidoreductase;protein_id=WP_017923293.1;transl_table=11 NZ_CP100137.1 RefSeq gene 710812 711606 . + . ID=gene-NIV78_RS20305;Name=NIV78_RS20305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20305 NZ_CP100137.1 Protein Homology CDS 710812 711606 . + 0 ID=cds-WP_015877699.1;Parent=gene-NIV78_RS20305;Dbxref=Genbank:WP_015877699.1;Name=WP_015877699.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877699.1;locus_tag=NIV78_RS20305;product=SDR family oxidoreductase;protein_id=WP_015877699.1;transl_table=11 NZ_CP100137.1 RefSeq gene 711682 712704 . + . ID=gene-NIV78_RS20310;Name=NIV78_RS20310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20310 NZ_CP100137.1 Protein Homology CDS 711682 712704 . + 0 ID=cds-WP_017423218.1;Parent=gene-NIV78_RS20310;Dbxref=Genbank:WP_017423218.1;Name=WP_017423218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255233.1;locus_tag=NIV78_RS20310;product=NADP-dependent oxidoreductase;protein_id=WP_017423218.1;transl_table=11 NZ_CP100137.1 RefSeq gene 712733 713164 . - . ID=gene-NIV78_RS20315;Name=NIV78_RS20315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20315 NZ_CP100137.1 Protein Homology CDS 712733 713164 . - 0 ID=cds-WP_015877697.1;Parent=gene-NIV78_RS20315;Dbxref=Genbank:WP_015877697.1;Name=WP_015877697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877697.1;locus_tag=NIV78_RS20315;product=hypothetical protein;protein_id=WP_015877697.1;transl_table=11 NZ_CP100137.1 RefSeq gene 713238 713771 . - . ID=gene-NIV78_RS20320;Name=NIV78_RS20320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20320 NZ_CP100137.1 GeneMarkS-2+ CDS 713238 713771 . - 0 ID=cds-WP_017923294.1;Parent=gene-NIV78_RS20320;Dbxref=Genbank:WP_017923294.1;Name=WP_017923294.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS20320;product=hypothetical protein;protein_id=WP_017923294.1;transl_table=11 NZ_CP100137.1 RefSeq gene 713934 715094 . - . ID=gene-NIV78_RS20325;Name=NIV78_RS20325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20325 NZ_CP100137.1 Protein Homology CDS 713934 715094 . - 0 ID=cds-WP_015877696.1;Parent=gene-NIV78_RS20325;Dbxref=Genbank:WP_015877696.1;Name=WP_015877696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877696.1;locus_tag=NIV78_RS20325;product=epoxide hydrolase;protein_id=WP_015877696.1;transl_table=11 NZ_CP100137.1 RefSeq gene 715185 715883 . - . ID=gene-NIV78_RS20330;Name=NIV78_RS20330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20330 NZ_CP100137.1 Protein Homology CDS 715185 715883 . - 0 ID=cds-WP_017923295.1;Parent=gene-NIV78_RS20330;Dbxref=Genbank:WP_017923295.1;Name=WP_017923295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877695.1;locus_tag=NIV78_RS20330;product=DUF1906 domain-containing protein;protein_id=WP_017923295.1;transl_table=11 NZ_CP100137.1 RefSeq gene 715984 716301 . - . ID=gene-NIV78_RS20335;Name=NIV78_RS20335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20335 NZ_CP100137.1 GeneMarkS-2+ CDS 715984 716301 . - 0 ID=cds-WP_017433030.1;Parent=gene-NIV78_RS20335;Dbxref=Genbank:WP_017433030.1;Name=WP_017433030.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS20335;product=hypothetical protein;protein_id=WP_017433030.1;transl_table=11 NZ_CP100137.1 RefSeq gene 716324 716764 . - . ID=gene-NIV78_RS20340;Name=NIV78_RS20340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20340 NZ_CP100137.1 GeneMarkS-2+ CDS 716324 716764 . - 0 ID=cds-WP_017433031.1;Parent=gene-NIV78_RS20340;Dbxref=Genbank:WP_017433031.1;Name=WP_017433031.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS20340;product=hypothetical protein;protein_id=WP_017433031.1;transl_table=11 NZ_CP100137.1 RefSeq gene 717262 717549 . + . ID=gene-NIV78_RS20345;Name=NIV78_RS20345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20345 NZ_CP100137.1 Protein Homology CDS 717262 717549 . + 0 ID=cds-WP_015877694.1;Parent=gene-NIV78_RS20345;Dbxref=Genbank:WP_015877694.1;Name=WP_015877694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877694.1;locus_tag=NIV78_RS20345;product=RebB family R body protein;protein_id=WP_015877694.1;transl_table=11 NZ_CP100137.1 RefSeq gene 717596 717865 . + . ID=gene-NIV78_RS20350;Name=NIV78_RS20350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20350 NZ_CP100137.1 Protein Homology CDS 717596 717865 . + 0 ID=cds-WP_015877693.1;Parent=gene-NIV78_RS20350;Dbxref=Genbank:WP_015877693.1;Name=WP_015877693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877693.1;locus_tag=NIV78_RS20350;product=RebB family R body protein;protein_id=WP_015877693.1;transl_table=11 NZ_CP100137.1 RefSeq gene 717909 718178 . + . ID=gene-NIV78_RS20355;Name=NIV78_RS20355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20355 NZ_CP100137.1 Protein Homology CDS 717909 718178 . + 0 ID=cds-WP_015877692.1;Parent=gene-NIV78_RS20355;Dbxref=Genbank:WP_015877692.1;Name=WP_015877692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877693.1;locus_tag=NIV78_RS20355;product=RebB family R body protein;protein_id=WP_015877692.1;transl_table=11 NZ_CP100137.1 RefSeq gene 718225 718494 . + . ID=gene-NIV78_RS20360;Name=NIV78_RS20360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20360 NZ_CP100137.1 Protein Homology CDS 718225 718494 . + 0 ID=cds-WP_015877691.1;Parent=gene-NIV78_RS20360;Dbxref=Genbank:WP_015877691.1;Name=WP_015877691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877693.1;locus_tag=NIV78_RS20360;product=RebB family R body protein;protein_id=WP_015877691.1;transl_table=11 NZ_CP100137.1 RefSeq gene 718523 718795 . + . ID=gene-NIV78_RS20365;Name=NIV78_RS20365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20365 NZ_CP100137.1 Protein Homology CDS 718523 718795 . + 0 ID=cds-WP_015877690.1;Parent=gene-NIV78_RS20365;Dbxref=Genbank:WP_015877690.1;Name=WP_015877690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877693.1;locus_tag=NIV78_RS20365;product=RebB family R body protein;protein_id=WP_015877690.1;transl_table=11 NZ_CP100137.1 RefSeq gene 718833 719105 . + . ID=gene-NIV78_RS20370;Name=NIV78_RS20370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20370 NZ_CP100137.1 Protein Homology CDS 718833 719105 . + 0 ID=cds-WP_015877689.1;Parent=gene-NIV78_RS20370;Dbxref=Genbank:WP_015877689.1;Name=WP_015877689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877689.1;locus_tag=NIV78_RS20370;product=RebB family R body protein;protein_id=WP_015877689.1;transl_table=11 NZ_CP100137.1 RefSeq gene 719173 719382 . + . ID=gene-NIV78_RS20375;Name=NIV78_RS20375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20375 NZ_CP100137.1 Protein Homology CDS 719173 719382 . + 0 ID=cds-WP_015877688.1;Parent=gene-NIV78_RS20375;Dbxref=Genbank:WP_015877688.1;Name=WP_015877688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877688.1;locus_tag=NIV78_RS20375;product=RebB family R body protein;protein_id=WP_015877688.1;transl_table=11 NZ_CP100137.1 RefSeq gene 719412 720068 . + . ID=gene-NIV78_RS20380;Name=NIV78_RS20380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20380 NZ_CP100137.1 Protein Homology CDS 719412 720068 . + 0 ID=cds-WP_257757829.1;Parent=gene-NIV78_RS20380;Dbxref=Genbank:WP_257757829.1;Name=WP_257757829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423224.1;locus_tag=NIV78_RS20380;product=RebB family R body protein;protein_id=WP_257757829.1;transl_table=11 NZ_CP100137.1 RefSeq gene 720200 720547 . + . ID=gene-NIV78_RS20385;Name=NIV78_RS20385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20385 NZ_CP100137.1 Protein Homology CDS 720200 720547 . + 0 ID=cds-WP_015877686.1;Parent=gene-NIV78_RS20385;Dbxref=Genbank:WP_015877686.1;Name=WP_015877686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877686.1;locus_tag=NIV78_RS20385;product=hypothetical protein;protein_id=WP_015877686.1;transl_table=11 NZ_CP100137.1 RefSeq gene 720568 721764 . + . ID=gene-NIV78_RS20390;Name=NIV78_RS20390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20390 NZ_CP100137.1 Protein Homology CDS 720568 721764 . + 0 ID=cds-WP_015877685.1;Parent=gene-NIV78_RS20390;Dbxref=Genbank:WP_015877685.1;Name=WP_015877685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877685.1;locus_tag=NIV78_RS20390;product=hypothetical protein;protein_id=WP_015877685.1;transl_table=11 NZ_CP100137.1 RefSeq gene 721971 722324 . + . ID=gene-NIV78_RS20395;Name=NIV78_RS20395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20395 NZ_CP100137.1 GeneMarkS-2+ CDS 721971 722324 . + 0 ID=cds-WP_251107767.1;Parent=gene-NIV78_RS20395;Dbxref=Genbank:WP_251107767.1;Name=WP_251107767.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS20395;product=hypothetical protein;protein_id=WP_251107767.1;transl_table=11 NZ_CP100137.1 RefSeq gene 722761 724392 . + . ID=gene-NIV78_RS20400;Name=NIV78_RS20400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20400 NZ_CP100137.1 Protein Homology CDS 722761 724392 . + 0 ID=cds-WP_015877684.1;Parent=gene-NIV78_RS20400;Dbxref=Genbank:WP_015877684.1;Name=WP_015877684.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF025885.2;locus_tag=NIV78_RS20400;product=helix-turn-helix domain-containing protein;protein_id=WP_015877684.1;transl_table=11 NZ_CP100137.1 RefSeq gene 725173 727209 . + . ID=gene-NIV78_RS20405;Name=NIV78_RS20405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20405 NZ_CP100137.1 Protein Homology CDS 725173 727209 . + 0 ID=cds-WP_015877683.1;Parent=gene-NIV78_RS20405;Dbxref=Genbank:WP_015877683.1;Name=WP_015877683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339934.1;locus_tag=NIV78_RS20405;product=TonB-dependent receptor;protein_id=WP_015877683.1;transl_table=11 NZ_CP100137.1 RefSeq gene 727443 727865 . + . ID=gene-NIV78_RS20410;Name=NIV78_RS20410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20410 NZ_CP100137.1 Protein Homology CDS 727443 727865 . + 0 ID=cds-WP_015877682.1;Parent=gene-NIV78_RS20410;Dbxref=Genbank:WP_015877682.1;Name=WP_015877682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877682.1;locus_tag=NIV78_RS20410;product=hypothetical protein;protein_id=WP_015877682.1;transl_table=11 NZ_CP100137.1 RefSeq gene 727994 729049 . - . ID=gene-NIV78_RS20415;Name=NIV78_RS20415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20415 NZ_CP100137.1 Protein Homology CDS 727994 729049 . - 0 ID=cds-WP_026051775.1;Parent=gene-NIV78_RS20415;Dbxref=Genbank:WP_026051775.1;Name=WP_026051775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877681.1;locus_tag=NIV78_RS20415;product=AI-2E family transporter;protein_id=WP_026051775.1;transl_table=11 NZ_CP100137.1 RefSeq gene 729236 729823 . - . ID=gene-NIV78_RS20420;Name=NIV78_RS20420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20420 NZ_CP100137.1 Protein Homology CDS 729236 729823 . - 0 ID=cds-WP_015877680.1;Parent=gene-NIV78_RS20420;Dbxref=Genbank:WP_015877680.1;Name=WP_015877680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690957.1;locus_tag=NIV78_RS20420;product=YSC84-related protein;protein_id=WP_015877680.1;transl_table=11 NZ_CP100137.1 RefSeq gene 729877 730260 . - . ID=gene-NIV78_RS20425;Name=NIV78_RS20425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20425 NZ_CP100137.1 Protein Homology CDS 729877 730260 . - 0 ID=cds-WP_015877679.1;Parent=gene-NIV78_RS20425;Dbxref=Genbank:WP_015877679.1;Name=WP_015877679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009895568.1;locus_tag=NIV78_RS20425;product=DUF883 family protein;protein_id=WP_015877679.1;transl_table=11 NZ_CP100137.1 RefSeq gene 730593 730880 . - . ID=gene-NIV78_RS20430;Name=NIV78_RS20430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20430 NZ_CP100137.1 GeneMarkS-2+ CDS 730593 730880 . - 0 ID=cds-WP_169511181.1;Parent=gene-NIV78_RS20430;Dbxref=Genbank:WP_169511181.1;Name=WP_169511181.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS20430;product=hypothetical protein;protein_id=WP_169511181.1;transl_table=11 NZ_CP100137.1 RefSeq gene 731059 731559 . - . ID=gene-NIV78_RS20435;Name=NIV78_RS20435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20435 NZ_CP100137.1 GeneMarkS-2+ CDS 731059 731559 . - 0 ID=cds-WP_257757831.1;Parent=gene-NIV78_RS20435;Dbxref=Genbank:WP_257757831.1;Name=WP_257757831.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS20435;product=hypothetical protein;protein_id=WP_257757831.1;transl_table=11 NZ_CP100137.1 RefSeq gene 732036 733115 . + . ID=gene-NIV78_RS20440;Name=NIV78_RS20440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20440 NZ_CP100137.1 Protein Homology CDS 732036 733115 . + 0 ID=cds-WP_257757832.1;Parent=gene-NIV78_RS20440;Dbxref=Genbank:WP_257757832.1;Name=WP_257757832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603844.1;locus_tag=NIV78_RS20440;product=transposase;protein_id=WP_257757832.1;transl_table=11 NZ_CP100137.1 RefSeq gene 733399 734973 . - . ID=gene-NIV78_RS20445;Name=NIV78_RS20445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20445 NZ_CP100137.1 Protein Homology CDS 733399 734973 . - 0 ID=cds-WP_161521524.1;Parent=gene-NIV78_RS20445;Dbxref=Genbank:WP_161521524.1;Name=WP_161521524.1;Ontology_term=GO:0009103,GO:0004476,GO:0008905;gbkey=CDS;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,mannose-phosphate guanylyltransferase activity|0008905||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690948.1;locus_tag=NIV78_RS20445;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_161521524.1;transl_table=11 NZ_CP100137.1 RefSeq gene 735408 736784 . + . ID=gene-NIV78_RS20450;Name=NIV78_RS20450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20450 NZ_CP100137.1 Protein Homology CDS 735408 736784 . + 0 ID=cds-WP_015877676.1;Parent=gene-NIV78_RS20450;Dbxref=Genbank:WP_015877676.1;Name=WP_015877676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525082.1;locus_tag=NIV78_RS20450;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_015877676.1;transl_table=11 NZ_CP100137.1 RefSeq gene 736864 738300 . + . ID=gene-NIV78_RS20455;Name=NIV78_RS20455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20455 NZ_CP100137.1 Protein Homology CDS 736864 738300 . + 0 ID=cds-WP_015877675.1;Parent=gene-NIV78_RS20455;Dbxref=Genbank:WP_015877675.1;Name=WP_015877675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011853683.1;locus_tag=NIV78_RS20455;product=UDP-glucose/GDP-mannose dehydrogenase family protein;protein_id=WP_015877675.1;transl_table=11 NZ_CP100137.1 RefSeq gene 738332 738775 . + . ID=gene-NIV78_RS20460;Name=NIV78_RS20460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20460 NZ_CP100137.1 Protein Homology CDS 738332 738775 . + 0 ID=cds-WP_015877674.1;Parent=gene-NIV78_RS20460;Dbxref=Genbank:WP_015877674.1;Name=WP_015877674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010110222.1;locus_tag=NIV78_RS20460;product=low molecular weight phosphotyrosine protein phosphatase;protein_id=WP_015877674.1;transl_table=11 NZ_CP100137.1 RefSeq gene 738856 739992 . + . ID=gene-NIV78_RS20465;Name=NIV78_RS20465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20465 NZ_CP100137.1 Protein Homology CDS 738856 739992 . + 0 ID=cds-WP_173941239.1;Parent=gene-NIV78_RS20465;Dbxref=Genbank:WP_173941239.1;Name=WP_173941239.1;Ontology_term=GO:0015774,GO:0015159,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=polysaccharide transmembrane transporter activity|0015159||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027952.1;locus_tag=NIV78_RS20465;product=polysaccharide biosynthesis/export family protein;protein_id=WP_173941239.1;transl_table=11 NZ_CP100137.1 RefSeq gene 740050 742275 . + . ID=gene-NIV78_RS20470;Name=NIV78_RS20470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20470 NZ_CP100137.1 Protein Homology CDS 740050 742275 . + 0 ID=cds-WP_026051778.1;Parent=gene-NIV78_RS20470;Dbxref=Genbank:WP_026051778.1;Name=WP_026051778.1;Ontology_term=GO:0045226;gbkey=CDS;go_process=extracellular polysaccharide biosynthetic process|0045226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009895611.1;locus_tag=NIV78_RS20470;product=polysaccharide biosynthesis tyrosine autokinase;protein_id=WP_026051778.1;transl_table=11 NZ_CP100137.1 RefSeq gene 742314 743264 . + . ID=gene-NIV78_RS20475;Name=NIV78_RS20475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20475 NZ_CP100137.1 Protein Homology CDS 742314 743264 . + 0 ID=cds-WP_153479048.1;Parent=gene-NIV78_RS20475;Dbxref=Genbank:WP_153479048.1;Name=WP_153479048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877671.1;locus_tag=NIV78_RS20475;product=glycosyltransferase;protein_id=WP_153479048.1;transl_table=11 NZ_CP100137.1 RefSeq gene 743331 744467 . + . ID=gene-NIV78_RS20480;Name=NIV78_RS20480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20480 NZ_CP100137.1 Protein Homology CDS 743331 744467 . + 0 ID=cds-WP_124837067.1;Parent=gene-NIV78_RS20480;Dbxref=Genbank:WP_124837067.1;Name=WP_124837067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690941.1;locus_tag=NIV78_RS20480;product=glycosyltransferase;protein_id=WP_124837067.1;transl_table=11 NZ_CP100137.1 RefSeq gene 744478 745962 . + . ID=gene-NIV78_RS20485;Name=NIV78_RS20485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20485 NZ_CP100137.1 Protein Homology CDS 744478 745962 . + 0 ID=cds-WP_017923837.1;Parent=gene-NIV78_RS20485;Dbxref=Genbank:WP_017923837.1;Name=WP_017923837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877669.1;locus_tag=NIV78_RS20485;product=glucose-6-phosphate isomerase;protein_id=WP_017923837.1;transl_table=11 NZ_CP100137.1 RefSeq gene 745959 747167 . + . ID=gene-NIV78_RS20490;Name=NIV78_RS20490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20490 NZ_CP100137.1 Protein Homology CDS 745959 747167 . + 0 ID=cds-WP_017923836.1;Parent=gene-NIV78_RS20490;Dbxref=Genbank:WP_017923836.1;Name=WP_017923836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877668.1;locus_tag=NIV78_RS20490;product=glycosyltransferase family 4 protein;protein_id=WP_017923836.1;transl_table=11 NZ_CP100137.1 RefSeq gene 747167 748333 . + . ID=gene-NIV78_RS20495;Name=NIV78_RS20495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20495 NZ_CP100137.1 Protein Homology CDS 747167 748333 . + 0 ID=cds-WP_017923835.1;Parent=gene-NIV78_RS20495;Dbxref=Genbank:WP_017923835.1;Name=WP_017923835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877667.1;locus_tag=NIV78_RS20495;product=glycosyltransferase family 4 protein;protein_id=WP_017923835.1;transl_table=11 NZ_CP100137.1 RefSeq gene 748446 749216 . - . ID=gene-NIV78_RS20500;Name=NIV78_RS20500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20500 NZ_CP100137.1 Protein Homology CDS 748446 749216 . - 0 ID=cds-WP_015877666.1;Parent=gene-NIV78_RS20500;Dbxref=Genbank:WP_015877666.1;Name=WP_015877666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690937.1;locus_tag=NIV78_RS20500;product=AraC family transcriptional regulator;protein_id=WP_015877666.1;transl_table=11 NZ_CP100137.1 RefSeq gene 749285 749626 . - . ID=gene-NIV78_RS20505;Name=NIV78_RS20505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20505 NZ_CP100137.1 Protein Homology CDS 749285 749626 . - 0 ID=cds-WP_015877665.1;Parent=gene-NIV78_RS20505;Dbxref=Genbank:WP_015877665.1;Name=WP_015877665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004537279.1;locus_tag=NIV78_RS20505;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_015877665.1;transl_table=11 NZ_CP100137.1 RefSeq gene 749918 750544 . + . ID=gene-NIV78_RS20510;Name=NIV78_RS20510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20510 NZ_CP100137.1 Protein Homology CDS 749918 750544 . + 0 ID=cds-WP_251107769.1;Parent=gene-NIV78_RS20510;Dbxref=Genbank:WP_251107769.1;Name=WP_251107769.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013429.2;locus_tag=NIV78_RS20510;product=TIM barrel protein;protein_id=WP_251107769.1;transl_table=11 NZ_CP100137.1 RefSeq gene 750541 751182 . + . ID=gene-NIV78_RS20515;Name=NIV78_RS20515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20515 NZ_CP100137.1 Protein Homology CDS 750541 751182 . + 0 ID=cds-WP_015877663.1;Parent=gene-NIV78_RS20515;Dbxref=Genbank:WP_015877663.1;Name=WP_015877663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690929.1;locus_tag=NIV78_RS20515;product=AAA family ATPase;protein_id=WP_015877663.1;transl_table=11 NZ_CP100137.1 RefSeq gene 751519 752439 . + . ID=gene-NIV78_RS20520;Name=NIV78_RS20520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20520 NZ_CP100137.1 Protein Homology CDS 751519 752439 . + 0 ID=cds-WP_015877662.1;Parent=gene-NIV78_RS20520;Dbxref=Genbank:WP_015877662.1;Name=WP_015877662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690925.1;locus_tag=NIV78_RS20520;product=metal-dependent hydrolase;protein_id=WP_015877662.1;transl_table=11 NZ_CP100137.1 RefSeq gene 752912 753334 . + . ID=gene-NIV78_RS20525;Name=NIV78_RS20525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20525 NZ_CP100137.1 Protein Homology CDS 752912 753334 . + 0 ID=cds-WP_015877661.1;Parent=gene-NIV78_RS20525;Dbxref=Genbank:WP_015877661.1;Name=WP_015877661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009895626.1;locus_tag=NIV78_RS20525;product=MbcA/ParS/Xre antitoxin family protein;protein_id=WP_015877661.1;transl_table=11 NZ_CP100137.1 RefSeq gene 753325 754032 . + . ID=gene-NIV78_RS20530;Name=NIV78_RS20530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20530 NZ_CP100137.1 Protein Homology CDS 753325 754032 . + 0 ID=cds-WP_198292432.1;Parent=gene-NIV78_RS20530;Dbxref=Genbank:WP_198292432.1;Name=WP_198292432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255919.1;locus_tag=NIV78_RS20530;product=RES family NAD+ phosphorylase;protein_id=WP_198292432.1;transl_table=11 NZ_CP100137.1 RefSeq gene 754070 754726 . + . ID=gene-NIV78_RS20535;Name=NIV78_RS20535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20535 NZ_CP100137.1 Protein Homology CDS 754070 754726 . + 0 ID=cds-WP_015877659.1;Parent=gene-NIV78_RS20535;Dbxref=Genbank:WP_015877659.1;Name=WP_015877659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877659.1;locus_tag=NIV78_RS20535;product=DUF1345 domain-containing protein;protein_id=WP_015877659.1;transl_table=11 NZ_CP100137.1 RefSeq gene 754772 755446 . - . ID=gene-NIV78_RS20540;Name=NIV78_RS20540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20540 NZ_CP100137.1 Protein Homology CDS 754772 755446 . - 0 ID=cds-WP_015877658.1;Parent=gene-NIV78_RS20540;Dbxref=Genbank:WP_015877658.1;Name=WP_015877658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877658.1;locus_tag=NIV78_RS20540;product=glutathione S-transferase;protein_id=WP_015877658.1;transl_table=11 NZ_CP100137.1 RefSeq gene 755645 756031 . + . ID=gene-NIV78_RS20545;Name=NIV78_RS20545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20545 NZ_CP100137.1 Protein Homology CDS 755645 756031 . + 0 ID=cds-WP_017923522.1;Parent=gene-NIV78_RS20545;Dbxref=Genbank:WP_017923522.1;Name=WP_017923522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877657.1;locus_tag=NIV78_RS20545;product=VOC family protein;protein_id=WP_017923522.1;transl_table=11 NZ_CP100137.1 RefSeq gene 756072 756824 . - . ID=gene-NIV78_RS20550;Name=NIV78_RS20550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20550 NZ_CP100137.1 Protein Homology CDS 756072 756824 . - 0 ID=cds-WP_015877656.1;Parent=gene-NIV78_RS20550;Dbxref=Genbank:WP_015877656.1;Name=WP_015877656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425072.1;locus_tag=NIV78_RS20550;product=alpha/beta hydrolase;protein_id=WP_015877656.1;transl_table=11 NZ_CP100137.1 RefSeq gene 757167 758831 . + . ID=gene-NIV78_RS20555;Name=NIV78_RS20555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20555 NZ_CP100137.1 Protein Homology CDS 757167 758831 . + 0 ID=cds-WP_015877655.1;Parent=gene-NIV78_RS20555;Dbxref=Genbank:WP_015877655.1;Name=WP_015877655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425071.1;locus_tag=NIV78_RS20555;product=DUF3459 domain-containing protein;protein_id=WP_015877655.1;transl_table=11 NZ_CP100137.1 RefSeq gene 758998 759609 . - . ID=gene-NIV78_RS20560;Name=NIV78_RS20560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20560 NZ_CP100137.1 Protein Homology CDS 758998 759609 . - 0 ID=cds-WP_015877654.1;Parent=gene-NIV78_RS20560;Dbxref=Genbank:WP_015877654.1;Name=WP_015877654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877654.1;locus_tag=NIV78_RS20560;product=thiamine phosphate synthase;protein_id=WP_015877654.1;transl_table=11 NZ_CP100137.1 RefSeq gene 759596 760510 . - . ID=gene-NIV78_RS20565;Name=NIV78_RS20565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20565 NZ_CP100137.1 Protein Homology CDS 759596 760510 . - 0 ID=cds-WP_015877653.1;Parent=gene-NIV78_RS20565;Dbxref=Genbank:WP_015877653.1;Name=WP_015877653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425069.1;locus_tag=NIV78_RS20565;product=LysR family transcriptional regulator;protein_id=WP_015877653.1;transl_table=11 NZ_CP100137.1 RefSeq gene 760614 761543 . + . ID=gene-NIV78_RS20570;Name=NIV78_RS20570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20570 NZ_CP100137.1 Protein Homology CDS 760614 761543 . + 0 ID=cds-WP_257757834.1;Parent=gene-NIV78_RS20570;Dbxref=Genbank:WP_257757834.1;Name=WP_257757834.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877652.1;locus_tag=NIV78_RS20570;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_257757834.1;transl_table=11 NZ_CP100137.1 RefSeq gene 761614 762954 . - . ID=gene-NIV78_RS20575;Name=NIV78_RS20575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20575 NZ_CP100137.1 Protein Homology CDS 761614 762954 . - 0 ID=cds-WP_015877651.1;Parent=gene-NIV78_RS20575;Dbxref=Genbank:WP_015877651.1;Name=WP_015877651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004546848.1;locus_tag=NIV78_RS20575;product=hemolysin family protein;protein_id=WP_015877651.1;transl_table=11 NZ_CP100137.1 RefSeq gene 763034 763822 . - . ID=gene-NIV78_RS20580;Name=NIV78_RS20580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20580 NZ_CP100137.1 Protein Homology CDS 763034 763822 . - 0 ID=cds-WP_015877650.1;Parent=gene-NIV78_RS20580;Dbxref=Genbank:WP_015877650.1;Name=WP_015877650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027918.1;locus_tag=NIV78_RS20580;product=HAMP domain-containing histidine kinase;protein_id=WP_015877650.1;transl_table=11 NZ_CP100137.1 RefSeq gene 763906 764835 . - . ID=gene-NIV78_RS20585;Name=NIV78_RS20585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20585 NZ_CP100137.1 Protein Homology CDS 763906 764835 . - 0 ID=cds-WP_015877649.1;Parent=gene-NIV78_RS20585;Dbxref=Genbank:WP_015877649.1;Name=WP_015877649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877649.1;locus_tag=NIV78_RS20585;product=DMT family transporter;protein_id=WP_015877649.1;transl_table=11 NZ_CP100137.1 RefSeq gene 765103 766908 . + . ID=gene-NIV78_RS20590;Name=NIV78_RS20590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20590 NZ_CP100137.1 Protein Homology CDS 765103 766908 . + 0 ID=cds-WP_257757835.1;Parent=gene-NIV78_RS20590;Dbxref=Genbank:WP_257757835.1;Name=WP_257757835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877648.1;locus_tag=NIV78_RS20590;product=CHAD domain-containing protein;protein_id=WP_257757835.1;transl_table=11 NZ_CP100137.1 RefSeq gene 766957 767652 . - . ID=gene-NIV78_RS20595;Name=NIV78_RS20595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20595 NZ_CP100137.1 Protein Homology CDS 766957 767652 . - 0 ID=cds-WP_015877647.1;Parent=gene-NIV78_RS20595;Dbxref=Genbank:WP_015877647.1;Name=WP_015877647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877647.1;locus_tag=NIV78_RS20595;product=phosphatase PAP2 family protein;protein_id=WP_015877647.1;transl_table=11 NZ_CP100137.1 RefSeq gene 767874 768995 . + . ID=gene-NIV78_RS20600;Name=NIV78_RS20600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20600 NZ_CP100137.1 Protein Homology CDS 767874 768995 . + 0 ID=cds-WP_035978882.1;Parent=gene-NIV78_RS20600;Dbxref=Genbank:WP_035978882.1;Name=WP_035978882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690908.1;locus_tag=NIV78_RS20600;product=PHB depolymerase family esterase;protein_id=WP_035978882.1;transl_table=11 NZ_CP100137.1 RefSeq gene 769090 769266 . + . ID=gene-NIV78_RS20605;Name=NIV78_RS20605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20605 NZ_CP100137.1 Protein Homology CDS 769090 769266 . + 0 ID=cds-WP_015877645.1;Parent=gene-NIV78_RS20605;Dbxref=Genbank:WP_015877645.1;Name=WP_015877645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877645.1;locus_tag=NIV78_RS20605;product=DUF3563 domain-containing protein;protein_id=WP_015877645.1;transl_table=11 NZ_CP100137.1 RefSeq gene 769457 769876 . - . ID=gene-NIV78_RS20610;Name=NIV78_RS20610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20610 NZ_CP100137.1 Protein Homology CDS 769457 769876 . - 0 ID=cds-WP_015877644.1;Parent=gene-NIV78_RS20610;Dbxref=Genbank:WP_015877644.1;Name=WP_015877644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009895704.1;locus_tag=NIV78_RS20610;product=organic hydroperoxide resistance protein;protein_id=WP_015877644.1;transl_table=11 NZ_CP100137.1 RefSeq gene 770048 770500 . - . ID=gene-NIV78_RS20615;Name=NIV78_RS20615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20615 NZ_CP100137.1 Protein Homology CDS 770048 770500 . - 0 ID=cds-WP_015877643.1;Parent=gene-NIV78_RS20615;Dbxref=Genbank:WP_015877643.1;Name=WP_015877643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877643.1;locus_tag=NIV78_RS20615;product=MarR family transcriptional regulator;protein_id=WP_015877643.1;transl_table=11 NZ_CP100137.1 RefSeq gene 770621 771427 . - . ID=gene-NIV78_RS20620;Name=NIV78_RS20620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20620 NZ_CP100137.1 Protein Homology CDS 770621 771427 . - 0 ID=cds-WP_015877642.1;Parent=gene-NIV78_RS20620;Dbxref=Genbank:WP_015877642.1;Name=WP_015877642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877642.1;locus_tag=NIV78_RS20620;product=BPSS1780 family membrane protein;protein_id=WP_015877642.1;transl_table=11 NZ_CP100137.1 RefSeq gene 771418 772416 . - . ID=gene-NIV78_RS20625;Name=NIV78_RS20625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20625 NZ_CP100137.1 Protein Homology CDS 771418 772416 . - 0 ID=cds-WP_015877641.1;Parent=gene-NIV78_RS20625;Dbxref=Genbank:WP_015877641.1;Name=WP_015877641.1;Ontology_term=GO:0009088,GO:0004413;gbkey=CDS;go_function=homoserine kinase activity|0004413||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254414.1;locus_tag=NIV78_RS20625;product=homoserine kinase;protein_id=WP_015877641.1;transl_table=11 NZ_CP100137.1 RefSeq gene 772518 772916 . - . ID=gene-NIV78_RS20630;Name=NIV78_RS20630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20630 NZ_CP100137.1 Protein Homology CDS 772518 772916 . - 0 ID=cds-WP_015877640.1;Parent=gene-NIV78_RS20630;Dbxref=Genbank:WP_015877640.1;Name=WP_015877640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010110125.1;locus_tag=NIV78_RS20630;product=hypothetical protein;protein_id=WP_015877640.1;transl_table=11 NZ_CP100137.1 RefSeq gene 773059 774582 . + . ID=gene-NIV78_RS20635;Name=NIV78_RS20635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20635 NZ_CP100137.1 Protein Homology CDS 773059 774582 . + 0 ID=cds-WP_015877639.1;Parent=gene-NIV78_RS20635;Dbxref=Genbank:WP_015877639.1;Name=WP_015877639.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004529041.1;locus_tag=NIV78_RS20635;product=AMP nucleosidase;protein_id=WP_015877639.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 774735 774881 . - . ID=gene-NIV78_RS20640;Name=NIV78_RS20640;end_range=774881,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS20640;partial=true;pseudo=true NZ_CP100137.1 Protein Homology CDS 774735 774881 . - 0 ID=cds-NIV78_RS20640;Parent=gene-NIV78_RS20640;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=774881,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017355.2;locus_tag=NIV78_RS20640;partial=true;product=toxin-antitoxin system HicB family antitoxin;pseudo=true;transl_table=11 NZ_CP100137.1 RefSeq gene 774931 776168 . - . ID=gene-NIV78_RS20645;Name=NIV78_RS20645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20645 NZ_CP100137.1 Protein Homology CDS 775877 776168 . - 0 ID=cds-WP_251118993.1;Parent=gene-NIV78_RS20645;Dbxref=Genbank:WP_251118993.1;Name=WP_251118993.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558218.1;locus_tag=NIV78_RS20645;product=IS3 family transposase;protein_id=WP_251118993.1;transl_table=11 NZ_CP100137.1 Protein Homology CDS 774931 775877 . - 2 ID=cds-WP_251118993.1;Parent=gene-NIV78_RS20645;Dbxref=Genbank:WP_251118993.1;Name=WP_251118993.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558218.1;locus_tag=NIV78_RS20645;product=IS3 family transposase;protein_id=WP_251118993.1;transl_table=11 NZ_CP100137.1 cmsearch sequence_feature 775771 775887 . - . ID=id-NIV78_RS20645;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS20645 NZ_CP100137.1 RefSeq gene 776239 776523 . - . ID=gene-NIV78_RS20650;Name=NIV78_RS20650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20650 NZ_CP100137.1 Protein Homology CDS 776239 776523 . - 0 ID=cds-WP_017922650.1;Parent=gene-NIV78_RS20650;Dbxref=Genbank:WP_017922650.1;Name=WP_017922650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877635.1;locus_tag=NIV78_RS20650;product=hypothetical protein;protein_id=WP_017922650.1;transl_table=11 NZ_CP100137.1 RefSeq gene 776520 777002 . - . ID=gene-NIV78_RS20655;Name=NIV78_RS20655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20655 NZ_CP100137.1 Protein Homology CDS 776520 777002 . - 0 ID=cds-WP_015877634.1;Parent=gene-NIV78_RS20655;Dbxref=Genbank:WP_015877634.1;Name=WP_015877634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525845.1;locus_tag=NIV78_RS20655;product=DUF2778 domain-containing protein;protein_id=WP_015877634.1;transl_table=11 NZ_CP100137.1 RefSeq gene 777583 777822 . - . ID=gene-NIV78_RS20660;Name=NIV78_RS20660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20660 NZ_CP100137.1 Protein Homology CDS 777583 777822 . - 0 ID=cds-WP_043225095.1;Parent=gene-NIV78_RS20660;Dbxref=Genbank:WP_043225095.1;Name=WP_043225095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877633.1;locus_tag=NIV78_RS20660;product=hypothetical protein;protein_id=WP_043225095.1;transl_table=11 NZ_CP100137.1 RefSeq gene 778352 780502 . + . ID=gene-NIV78_RS20665;Name=NIV78_RS20665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20665 NZ_CP100137.1 Protein Homology CDS 778352 780502 . + 0 ID=cds-WP_015877632.1;Parent=gene-NIV78_RS20665;Dbxref=Genbank:WP_015877632.1;Name=WP_015877632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877632.1;locus_tag=NIV78_RS20665;product=FUSC family protein;protein_id=WP_015877632.1;transl_table=11 NZ_CP100137.1 RefSeq gene 780684 781451 . - . ID=gene-NIV78_RS20670;Name=NIV78_RS20670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20670 NZ_CP100137.1 Protein Homology CDS 780684 781451 . - 0 ID=cds-WP_015877631.1;Parent=gene-NIV78_RS20670;Dbxref=Genbank:WP_015877631.1;Name=WP_015877631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881579.1;locus_tag=NIV78_RS20670;product=TIGR00730 family Rossman fold protein;protein_id=WP_015877631.1;transl_table=11 NZ_CP100137.1 RefSeq gene 781453 784206 . + . ID=gene-NIV78_RS20675;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=NIV78_RS20675 NZ_CP100137.1 Protein Homology CDS 781453 784206 . + 0 ID=cds-WP_015877630.1;Parent=gene-NIV78_RS20675;Dbxref=Genbank:WP_015877630.1;Name=WP_015877630.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761695.1;locus_tag=NIV78_RS20675;product=DNA polymerase I;protein_id=WP_015877630.1;transl_table=11 NZ_CP100137.1 RefSeq gene 784434 785804 . + . ID=gene-NIV78_RS20680;Name=NIV78_RS20680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20680 NZ_CP100137.1 Protein Homology CDS 784434 785804 . + 0 ID=cds-WP_017423610.1;Parent=gene-NIV78_RS20680;Dbxref=Genbank:WP_017423610.1;Name=WP_017423610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190401.1;locus_tag=NIV78_RS20680;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_017423610.1;transl_table=11 NZ_CP100137.1 RefSeq gene 786033 786908 . + . ID=gene-NIV78_RS20685;Name=NIV78_RS20685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20685 NZ_CP100137.1 Protein Homology CDS 786033 786908 . + 0 ID=cds-WP_017922648.1;Parent=gene-NIV78_RS20685;Dbxref=Genbank:WP_017922648.1;Name=WP_017922648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190499.1;locus_tag=NIV78_RS20685;product=dienelactone hydrolase family protein;protein_id=WP_017922648.1;transl_table=11 NZ_CP100137.1 RefSeq gene 786924 787793 . - . ID=gene-NIV78_RS20690;Name=NIV78_RS20690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20690 NZ_CP100137.1 Protein Homology CDS 786924 787793 . - 0 ID=cds-WP_017922647.1;Parent=gene-NIV78_RS20690;Dbxref=Genbank:WP_017922647.1;Name=WP_017922647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004529026.1;locus_tag=NIV78_RS20690;product=sulfurtransferase;protein_id=WP_017922647.1;transl_table=11 NZ_CP100137.1 RefSeq gene 787897 789003 . - . ID=gene-NIV78_RS20695;Name=NIV78_RS20695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20695 NZ_CP100137.1 Protein Homology CDS 787897 789003 . - 0 ID=cds-WP_015877626.1;Parent=gene-NIV78_RS20695;Dbxref=Genbank:WP_015877626.1;Name=WP_015877626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027818.1;locus_tag=NIV78_RS20695;product=aromatic ring-hydroxylating dioxygenase subunit alpha;protein_id=WP_015877626.1;transl_table=11 NZ_CP100137.1 RefSeq gene 789273 789566 . + . ID=gene-NIV78_RS20700;Name=NIV78_RS20700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20700 NZ_CP100137.1 Protein Homology CDS 789273 789566 . + 0 ID=cds-WP_017423608.1;Parent=gene-NIV78_RS20700;Dbxref=Genbank:WP_017423608.1;Name=WP_017423608.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399451.1;locus_tag=NIV78_RS20700;product=exodeoxyribonuclease VII small subunit;protein_id=WP_017423608.1;transl_table=11 NZ_CP100137.1 RefSeq gene 789563 790447 . + . ID=gene-NIV78_RS20705;Name=NIV78_RS20705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20705 NZ_CP100137.1 Protein Homology CDS 789563 790447 . + 0 ID=cds-WP_015877624.1;Parent=gene-NIV78_RS20705;Dbxref=Genbank:WP_015877624.1;Name=WP_015877624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486453.1;locus_tag=NIV78_RS20705;product=polyprenyl synthetase family protein;protein_id=WP_015877624.1;transl_table=11 NZ_CP100137.1 RefSeq gene 790533 792437 . + . ID=gene-NIV78_RS20710;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=NIV78_RS20710 NZ_CP100137.1 Protein Homology CDS 790533 792437 . + 0 ID=cds-WP_015877623.1;Parent=gene-NIV78_RS20710;Dbxref=Genbank:WP_015877623.1;Name=WP_015877623.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338492.1;locus_tag=NIV78_RS20710;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_015877623.1;transl_table=11 NZ_CP100137.1 RefSeq gene 792607 793413 . + . ID=gene-NIV78_RS20715;Name=folE2;gbkey=Gene;gene=folE2;gene_biotype=protein_coding;locus_tag=NIV78_RS20715 NZ_CP100137.1 Protein Homology CDS 792607 793413 . + 0 ID=cds-WP_257757836.1;Parent=gene-NIV78_RS20715;Dbxref=Genbank:WP_257757836.1;Name=WP_257757836.1;Ontology_term=GO:0035998,GO:0003933;gbkey=CDS;gene=folE2;go_function=GTP cyclohydrolase activity|0003933||IEA;go_process=7%2C8-dihydroneopterin 3'-triphosphate biosynthetic process|0035998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877622.1;locus_tag=NIV78_RS20715;product=GTP cyclohydrolase FolE2;protein_id=WP_257757836.1;transl_table=11 NZ_CP100137.1 RefSeq gene 793488 794528 . - . ID=gene-NIV78_RS20720;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=NIV78_RS20720 NZ_CP100137.1 Protein Homology CDS 793488 794528 . - 0 ID=cds-WP_015877621.1;Parent=gene-NIV78_RS20720;Dbxref=Genbank:WP_015877621.1;Name=WP_015877621.1;Ontology_term=GO:0006400;gbkey=CDS;gene=tsaD;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027813.1;locus_tag=NIV78_RS20720;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_015877621.1;transl_table=11 NZ_CP100137.1 RefSeq gene 794807 796024 . + . ID=gene-NIV78_RS20725;Name=NIV78_RS20725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20725 NZ_CP100137.1 Protein Homology CDS 794807 796024 . + 0 ID=cds-WP_015877620.1;Parent=gene-NIV78_RS20725;Dbxref=Genbank:WP_015877620.1;Name=WP_015877620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877620.1;locus_tag=NIV78_RS20725;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_015877620.1;transl_table=11 NZ_CP100137.1 RefSeq gene 796103 796315 . + . ID=gene-NIV78_RS20730;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=NIV78_RS20730 NZ_CP100137.1 Protein Homology CDS 796103 796315 . + 0 ID=cds-WP_006479415.1;Parent=gene-NIV78_RS20730;Dbxref=Genbank:WP_006479415.1;Name=WP_006479415.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsU;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011903537.1;locus_tag=NIV78_RS20730;product=30S ribosomal protein S21;protein_id=WP_006479415.1;transl_table=11 NZ_CP100137.1 RefSeq gene 796499 796945 . + . ID=gene-NIV78_RS20735;Name=NIV78_RS20735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20735 NZ_CP100137.1 Protein Homology CDS 796499 796945 . + 0 ID=cds-WP_015877618.1;Parent=gene-NIV78_RS20735;Dbxref=Genbank:WP_015877618.1;Name=WP_015877618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900012.1;locus_tag=NIV78_RS20735;product=GatB/YqeY domain-containing protein;protein_id=WP_015877618.1;transl_table=11 NZ_CP100137.1 RefSeq gene 796998 798884 . + . ID=gene-NIV78_RS20740;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=NIV78_RS20740 NZ_CP100137.1 Protein Homology CDS 796998 798884 . + 0 ID=cds-WP_257757837.1;Parent=gene-NIV78_RS20740;Dbxref=Genbank:WP_257757837.1;Name=WP_257757837.1;Ontology_term=GO:0006269,GO:0003896;gbkey=CDS;gene=dnaG;go_function=DNA primase activity|0003896||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765502.1;locus_tag=NIV78_RS20740;product=DNA primase;protein_id=WP_257757837.1;transl_table=11 NZ_CP100137.1 RefSeq gene 798959 799309 . - . ID=gene-NIV78_RS20745;Name=NIV78_RS20745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20745 NZ_CP100137.1 GeneMarkS-2+ CDS 798959 799309 . - 0 ID=cds-WP_230674369.1;Parent=gene-NIV78_RS20745;Dbxref=Genbank:WP_230674369.1;Name=WP_230674369.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS20745;product=RNA polymerase subunit sigma;protein_id=WP_230674369.1;transl_table=11 NZ_CP100137.1 RefSeq gene 799251 801431 . + . ID=gene-NIV78_RS20750;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=NIV78_RS20750 NZ_CP100137.1 Protein Homology CDS 799251 801431 . + 0 ID=cds-WP_257758063.1;Parent=gene-NIV78_RS20750;Dbxref=Genbank:WP_257758063.1;Name=WP_257758063.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011807587.1;locus_tag=NIV78_RS20750;product=RNA polymerase sigma factor RpoD;protein_id=WP_257758063.1;transl_table=11 NZ_CP100137.1 RefSeq gene 801568 801643 . + . ID=gene-NIV78_RS20755;Name=NIV78_RS20755;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS20755 NZ_CP100137.1 tRNAscan-SE tRNA 801568 801643 . + . ID=rna-NIV78_RS20755;Parent=gene-NIV78_RS20755;anticodon=(pos:801601..801603);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS20755;product=tRNA-Ile NZ_CP100137.1 tRNAscan-SE exon 801568 801643 . + . ID=exon-NIV78_RS20755-1;Parent=rna-NIV78_RS20755;anticodon=(pos:801601..801603);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS20755;product=tRNA-Ile NZ_CP100137.1 RefSeq gene 801669 802850 . - . ID=gene-NIV78_RS20760;Name=NIV78_RS20760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20760 NZ_CP100137.1 Protein Homology CDS 801669 802850 . - 0 ID=cds-WP_257757838.1;Parent=gene-NIV78_RS20760;Dbxref=Genbank:WP_257757838.1;Name=WP_257757838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009550289.1;locus_tag=NIV78_RS20760;product=site-specific integrase;protein_id=WP_257757838.1;transl_table=11 NZ_CP100137.1 RefSeq gene 802826 803035 . - . ID=gene-NIV78_RS20765;Name=NIV78_RS20765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20765 NZ_CP100137.1 Protein Homology CDS 802826 803035 . - 0 ID=cds-WP_186169210.1;Parent=gene-NIV78_RS20765;Dbxref=Genbank:WP_186169210.1;Name=WP_186169210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010110038.1;locus_tag=NIV78_RS20765;product=excisionase;protein_id=WP_186169210.1;transl_table=11 NZ_CP100137.1 RefSeq gene 803038 803175 . - . ID=gene-NIV78_RS20770;Name=NIV78_RS20770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20770 NZ_CP100137.1 Protein Homology CDS 803038 803175 . - 0 ID=cds-WP_251107429.1;Parent=gene-NIV78_RS20770;Dbxref=Genbank:WP_251107429.1;Name=WP_251107429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467998.1;locus_tag=NIV78_RS20770;product=hypothetical protein;protein_id=WP_251107429.1;transl_table=11 NZ_CP100137.1 RefSeq gene 803172 803324 . - . ID=gene-NIV78_RS20775;Name=NIV78_RS20775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20775 NZ_CP100137.1 GeneMarkS-2+ CDS 803172 803324 . - 0 ID=cds-WP_257757839.1;Parent=gene-NIV78_RS20775;Dbxref=Genbank:WP_257757839.1;Name=WP_257757839.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS20775;product=hypothetical protein;protein_id=WP_257757839.1;transl_table=11 NZ_CP100137.1 RefSeq gene 803321 803686 . - . ID=gene-NIV78_RS20780;Name=NIV78_RS20780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20780 NZ_CP100137.1 Protein Homology CDS 803321 803686 . - 0 ID=cds-WP_257757840.1;Parent=gene-NIV78_RS20780;Dbxref=Genbank:WP_257757840.1;Name=WP_257757840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015039429.1;locus_tag=NIV78_RS20780;product=hypothetical protein;protein_id=WP_257757840.1;transl_table=11 NZ_CP100137.1 RefSeq gene 803683 804402 . - . ID=gene-NIV78_RS20785;Name=NIV78_RS20785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20785 NZ_CP100137.1 Protein Homology CDS 803683 804402 . - 0 ID=cds-WP_257757841.1;Parent=gene-NIV78_RS20785;Dbxref=Genbank:WP_257757841.1;Name=WP_257757841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013956337.1;locus_tag=NIV78_RS20785;product=hypothetical protein;protein_id=WP_257757841.1;transl_table=11 NZ_CP100137.1 RefSeq gene 804399 804938 . - . ID=gene-NIV78_RS20790;Name=NIV78_RS20790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20790 NZ_CP100137.1 GeneMarkS-2+ CDS 804399 804938 . - 0 ID=cds-WP_257757842.1;Parent=gene-NIV78_RS20790;Dbxref=Genbank:WP_257757842.1;Name=WP_257757842.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS20790;product=hypothetical protein;protein_id=WP_257757842.1;transl_table=11 NZ_CP100137.1 RefSeq gene 804935 805366 . - . ID=gene-NIV78_RS20795;Name=NIV78_RS20795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20795 NZ_CP100137.1 Protein Homology CDS 804935 805366 . - 0 ID=cds-WP_257757846.1;Parent=gene-NIV78_RS20795;Dbxref=Genbank:WP_257757846.1;Name=WP_257757846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012762674.1;locus_tag=NIV78_RS20795;product=hypothetical protein;protein_id=WP_257757846.1;transl_table=11 NZ_CP100137.1 RefSeq gene 805350 806543 . - . ID=gene-NIV78_RS20800;Name=NIV78_RS20800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20800 NZ_CP100137.1 GeneMarkS-2+ CDS 805350 806543 . - 0 ID=cds-WP_257757847.1;Parent=gene-NIV78_RS20800;Dbxref=Genbank:WP_257757847.1;Name=WP_257757847.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS20800;product=hypothetical protein;protein_id=WP_257757847.1;transl_table=11 NZ_CP100137.1 RefSeq gene 806540 806905 . - . ID=gene-NIV78_RS20805;Name=NIV78_RS20805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20805 NZ_CP100137.1 Protein Homology CDS 806540 806905 . - 0 ID=cds-WP_257757848.1;Parent=gene-NIV78_RS20805;Dbxref=Genbank:WP_257757848.1;Name=WP_257757848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010110032.1;locus_tag=NIV78_RS20805;product=hypothetical protein;protein_id=WP_257757848.1;transl_table=11 NZ_CP100137.1 RefSeq gene 807042 807554 . - . ID=gene-NIV78_RS20810;Name=NIV78_RS20810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20810 NZ_CP100137.1 Protein Homology CDS 807042 807554 . - 0 ID=cds-WP_257757849.1;Parent=gene-NIV78_RS20810;Dbxref=Genbank:WP_257757849.1;Name=WP_257757849.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017386.2;locus_tag=NIV78_RS20810;product=siphovirus Gp157 family protein;protein_id=WP_257757849.1;transl_table=11 NZ_CP100137.1 RefSeq gene 807564 808202 . - . ID=gene-NIV78_RS20815;Name=NIV78_RS20815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20815 NZ_CP100137.1 GeneMarkS-2+ CDS 807564 808202 . - 0 ID=cds-WP_257757851.1;Parent=gene-NIV78_RS20815;Dbxref=Genbank:WP_257757851.1;Name=WP_257757851.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS20815;product=hypothetical protein;protein_id=WP_257757851.1;transl_table=11 NZ_CP100137.1 RefSeq gene 808216 808878 . - . ID=gene-NIV78_RS20820;Name=NIV78_RS20820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20820 NZ_CP100137.1 Protein Homology CDS 808216 808878 . - 0 ID=cds-WP_251107437.1;Parent=gene-NIV78_RS20820;Dbxref=Genbank:WP_251107437.1;Name=WP_251107437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013434664.1;locus_tag=NIV78_RS20820;product=AAA family ATPase;protein_id=WP_251107437.1;transl_table=11 NZ_CP100137.1 RefSeq gene 808957 809118 . - . ID=gene-NIV78_RS20825;Name=NIV78_RS20825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20825 NZ_CP100137.1 Protein Homology CDS 808957 809118 . - 0 ID=cds-WP_257757859.1;Parent=gene-NIV78_RS20825;Dbxref=Genbank:WP_257757859.1;Name=WP_257757859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407503.1;locus_tag=NIV78_RS20825;product=hypothetical protein;protein_id=WP_257757859.1;transl_table=11 NZ_CP100137.1 RefSeq gene 809115 809324 . - . ID=gene-NIV78_RS20830;Name=NIV78_RS20830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20830 NZ_CP100137.1 GeneMarkS-2+ CDS 809115 809324 . - 0 ID=cds-WP_257757860.1;Parent=gene-NIV78_RS20830;Dbxref=Genbank:WP_257757860.1;Name=WP_257757860.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS20830;product=hypothetical protein;protein_id=WP_257757860.1;transl_table=11 NZ_CP100137.1 RefSeq gene 809422 809619 . - . ID=gene-NIV78_RS20835;Name=NIV78_RS20835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20835 NZ_CP100137.1 GeneMarkS-2+ CDS 809422 809619 . - 0 ID=cds-WP_251107440.1;Parent=gene-NIV78_RS20835;Dbxref=Genbank:WP_251107440.1;Name=WP_251107440.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS20835;product=hypothetical protein;protein_id=WP_251107440.1;transl_table=11 NZ_CP100137.1 RefSeq gene 809621 810043 . - . ID=gene-NIV78_RS20840;Name=NIV78_RS20840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20840 NZ_CP100137.1 GeneMarkS-2+ CDS 809621 810043 . - 0 ID=cds-WP_257757862.1;Parent=gene-NIV78_RS20840;Dbxref=Genbank:WP_257757862.1;Name=WP_257757862.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS20840;product=hypothetical protein;protein_id=WP_257757862.1;transl_table=11 NZ_CP100137.1 RefSeq gene 810068 810403 . - . ID=gene-NIV78_RS20845;Name=NIV78_RS20845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20845 NZ_CP100137.1 GeneMarkS-2+ CDS 810068 810403 . - 0 ID=cds-WP_257757864.1;Parent=gene-NIV78_RS20845;Dbxref=Genbank:WP_257757864.1;Name=WP_257757864.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS20845;product=hypothetical protein;protein_id=WP_257757864.1;transl_table=11 NZ_CP100137.1 RefSeq gene 810523 811020 . - . ID=gene-NIV78_RS20850;Name=NIV78_RS20850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20850 NZ_CP100137.1 Protein Homology CDS 810523 811020 . - 0 ID=cds-WP_257757865.1;Parent=gene-NIV78_RS20850;Dbxref=Genbank:WP_257757865.1;Name=WP_257757865.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024784.2;locus_tag=NIV78_RS20850;product=HNH endonuclease;protein_id=WP_257757865.1;transl_table=11 NZ_CP100137.1 RefSeq gene 811145 811453 . - . ID=gene-NIV78_RS20855;Name=NIV78_RS20855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20855 NZ_CP100137.1 GeneMarkS-2+ CDS 811145 811453 . - 0 ID=cds-WP_257757866.1;Parent=gene-NIV78_RS20855;Dbxref=Genbank:WP_257757866.1;Name=WP_257757866.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS20855;product=hypothetical protein;protein_id=WP_257757866.1;transl_table=11 NZ_CP100137.1 RefSeq gene 811455 812168 . - . ID=gene-NIV78_RS20860;Name=NIV78_RS20860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20860 NZ_CP100137.1 Protein Homology CDS 811455 812168 . - 0 ID=cds-WP_257758065.1;Parent=gene-NIV78_RS20860;Dbxref=Genbank:WP_257758065.1;Name=WP_257758065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216683.1;locus_tag=NIV78_RS20860;product=hypothetical protein;protein_id=WP_257758065.1;transl_table=11 NZ_CP100137.1 RefSeq gene 812173 812445 . - . ID=gene-NIV78_RS20865;Name=NIV78_RS20865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20865 NZ_CP100137.1 GeneMarkS-2+ CDS 812173 812445 . - 0 ID=cds-WP_257757867.1;Parent=gene-NIV78_RS20865;Dbxref=Genbank:WP_257757867.1;Name=WP_257757867.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS20865;product=hypothetical protein;protein_id=WP_257757867.1;transl_table=11 NZ_CP100137.1 RefSeq gene 812810 813136 . - . ID=gene-NIV78_RS20870;Name=NIV78_RS20870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20870 NZ_CP100137.1 GeneMarkS-2+ CDS 812810 813136 . - 0 ID=cds-WP_257757868.1;Parent=gene-NIV78_RS20870;Dbxref=Genbank:WP_257757868.1;Name=WP_257757868.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS20870;product=hypothetical protein;protein_id=WP_257757868.1;transl_table=11 NZ_CP100137.1 RefSeq gene 813858 814058 . + . ID=gene-NIV78_RS20875;Name=NIV78_RS20875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20875 NZ_CP100137.1 Protein Homology CDS 813858 814058 . + 0 ID=cds-WP_257757869.1;Parent=gene-NIV78_RS20875;Dbxref=Genbank:WP_257757869.1;Name=WP_257757869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020071537.1;locus_tag=NIV78_RS20875;product=hypothetical protein;protein_id=WP_257757869.1;transl_table=11 NZ_CP100137.1 RefSeq gene 814102 814941 . - . ID=gene-NIV78_RS20880;Name=NIV78_RS20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20880 NZ_CP100137.1 GeneMarkS-2+ CDS 814102 814941 . - 0 ID=cds-WP_257757870.1;Parent=gene-NIV78_RS20880;Dbxref=Genbank:WP_257757870.1;Name=WP_257757870.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS20880;product=hypothetical protein;protein_id=WP_257757870.1;transl_table=11 NZ_CP100137.1 RefSeq gene 814938 815663 . - . ID=gene-NIV78_RS20885;Name=NIV78_RS20885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20885 NZ_CP100137.1 GeneMarkS-2+ CDS 814938 815663 . - 0 ID=cds-WP_257757871.1;Parent=gene-NIV78_RS20885;Dbxref=Genbank:WP_257757871.1;Name=WP_257757871.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS20885;product=hypothetical protein;protein_id=WP_257757871.1;transl_table=11 NZ_CP100137.1 RefSeq gene 815705 816454 . - . ID=gene-NIV78_RS20890;Name=NIV78_RS20890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20890 NZ_CP100137.1 Protein Homology CDS 815705 816454 . - 0 ID=cds-WP_257757872.1;Parent=gene-NIV78_RS20890;Dbxref=Genbank:WP_257757872.1;Name=WP_257757872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330106.1;locus_tag=NIV78_RS20890;product=S24 family peptidase;protein_id=WP_257757872.1;transl_table=11 NZ_CP100137.1 RefSeq gene 816540 816779 . + . ID=gene-NIV78_RS20895;Name=NIV78_RS20895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20895 NZ_CP100137.1 Protein Homology CDS 816540 816779 . + 0 ID=cds-WP_257757873.1;Parent=gene-NIV78_RS20895;Dbxref=Genbank:WP_257757873.1;Name=WP_257757873.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027273.2;locus_tag=NIV78_RS20895;product=helix-turn-helix domain-containing protein;protein_id=WP_257757873.1;transl_table=11 NZ_CP100137.1 RefSeq gene 816785 817213 . - . ID=gene-NIV78_RS20900;Name=NIV78_RS20900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20900 NZ_CP100137.1 GeneMarkS-2+ CDS 816785 817213 . - 0 ID=cds-WP_257757875.1;Parent=gene-NIV78_RS20900;Dbxref=Genbank:WP_257757875.1;Name=WP_257757875.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS20900;product=hypothetical protein;protein_id=WP_257757875.1;transl_table=11 NZ_CP100137.1 RefSeq gene 817303 817488 . + . ID=gene-NIV78_RS20905;Name=NIV78_RS20905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20905 NZ_CP100137.1 GeneMarkS-2+ CDS 817303 817488 . + 0 ID=cds-WP_257757877.1;Parent=gene-NIV78_RS20905;Dbxref=Genbank:WP_257757877.1;Name=WP_257757877.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS20905;product=hypothetical protein;protein_id=WP_257757877.1;transl_table=11 NZ_CP100137.1 RefSeq gene 817485 817718 . + . ID=gene-NIV78_RS20910;Name=NIV78_RS20910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20910 NZ_CP100137.1 GeneMarkS-2+ CDS 817485 817718 . + 0 ID=cds-WP_257757879.1;Parent=gene-NIV78_RS20910;Dbxref=Genbank:WP_257757879.1;Name=WP_257757879.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS20910;product=hypothetical protein;protein_id=WP_257757879.1;transl_table=11 NZ_CP100137.1 RefSeq gene 817720 817959 . - . ID=gene-NIV78_RS20915;Name=NIV78_RS20915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20915 NZ_CP100137.1 GeneMarkS-2+ CDS 817720 817959 . - 0 ID=cds-WP_257757881.1;Parent=gene-NIV78_RS20915;Dbxref=Genbank:WP_257757881.1;Name=WP_257757881.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS20915;product=hypothetical protein;protein_id=WP_257757881.1;transl_table=11 NZ_CP100137.1 RefSeq gene 818049 818366 . + . ID=gene-NIV78_RS20920;Name=NIV78_RS20920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20920 NZ_CP100137.1 Protein Homology CDS 818049 818366 . + 0 ID=cds-WP_257757887.1;Parent=gene-NIV78_RS20920;Dbxref=Genbank:WP_257757887.1;Name=WP_257757887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010926420.1;locus_tag=NIV78_RS20920;product=hypothetical protein;protein_id=WP_257757887.1;transl_table=11 NZ_CP100137.1 RefSeq gene 818381 819154 . + . ID=gene-NIV78_RS20925;Name=NIV78_RS20925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20925 NZ_CP100137.1 Protein Homology CDS 818381 819154 . + 0 ID=cds-WP_257757888.1;Parent=gene-NIV78_RS20925;Dbxref=Genbank:WP_257757888.1;Name=WP_257757888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004536185.1;locus_tag=NIV78_RS20925;product=hypothetical protein;protein_id=WP_257757888.1;transl_table=11 NZ_CP100137.1 RefSeq gene 819141 819935 . + . ID=gene-NIV78_RS20930;Name=NIV78_RS20930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20930 NZ_CP100137.1 Protein Homology CDS 819141 819935 . + 0 ID=cds-WP_257757889.1;Parent=gene-NIV78_RS20930;Dbxref=Genbank:WP_257757889.1;Name=WP_257757889.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683082.1;locus_tag=NIV78_RS20930;product=ATP-binding protein;protein_id=WP_257757889.1;transl_table=11 NZ_CP100137.1 RefSeq gene 819932 820345 . + . ID=gene-NIV78_RS20935;Name=NIV78_RS20935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20935 NZ_CP100137.1 Protein Homology CDS 819932 820345 . + 0 ID=cds-WP_257757890.1;Parent=gene-NIV78_RS20935;Dbxref=Genbank:WP_257757890.1;Name=WP_257757890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006681979.1;locus_tag=NIV78_RS20935;product=recombination protein NinB;protein_id=WP_257757890.1;transl_table=11 NZ_CP100137.1 RefSeq gene 820345 820911 . + . ID=gene-NIV78_RS20940;Name=NIV78_RS20940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20940 NZ_CP100137.1 Protein Homology CDS 820345 820911 . + 0 ID=cds-WP_257757891.1;Parent=gene-NIV78_RS20940;Dbxref=Genbank:WP_257757891.1;Name=WP_257757891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884147.1;locus_tag=NIV78_RS20940;product=recombination protein NinG;protein_id=WP_257757891.1;transl_table=11 NZ_CP100137.1 RefSeq gene 820908 821186 . + . ID=gene-NIV78_RS20945;Name=NIV78_RS20945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20945 NZ_CP100137.1 GeneMarkS-2+ CDS 820908 821186 . + 0 ID=cds-WP_257757892.1;Parent=gene-NIV78_RS20945;Dbxref=Genbank:WP_257757892.1;Name=WP_257757892.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS20945;product=hypothetical protein;protein_id=WP_257757892.1;transl_table=11 NZ_CP100137.1 RefSeq gene 821734 822114 . + . ID=gene-NIV78_RS20950;Name=NIV78_RS20950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20950 NZ_CP100137.1 GeneMarkS-2+ CDS 821734 822114 . + 0 ID=cds-WP_257757893.1;Parent=gene-NIV78_RS20950;Dbxref=Genbank:WP_257757893.1;Name=WP_257757893.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS20950;product=winged helix-turn-helix domain-containing protein;protein_id=WP_257757893.1;transl_table=11 NZ_CP100137.1 RefSeq gene 822126 822557 . + . ID=gene-NIV78_RS20955;Name=NIV78_RS20955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20955 NZ_CP100137.1 Protein Homology CDS 822126 822557 . + 0 ID=cds-WP_257757894.1;Parent=gene-NIV78_RS20955;Dbxref=Genbank:WP_257757894.1;Name=WP_257757894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403342.1;locus_tag=NIV78_RS20955;product=hypothetical protein;protein_id=WP_257757894.1;transl_table=11 NZ_CP100137.1 RefSeq gene 822554 822964 . + . ID=gene-NIV78_RS20960;Name=NIV78_RS20960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20960 NZ_CP100137.1 GeneMarkS-2+ CDS 822554 822964 . + 0 ID=cds-WP_257757895.1;Parent=gene-NIV78_RS20960;Dbxref=Genbank:WP_257757895.1;Name=WP_257757895.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS20960;product=hypothetical protein;protein_id=WP_257757895.1;transl_table=11 NZ_CP100137.1 RefSeq gene 823069 823144 . + . ID=gene-NIV78_RS20965;Name=NIV78_RS20965;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS20965 NZ_CP100137.1 tRNAscan-SE tRNA 823069 823144 . + . ID=rna-NIV78_RS20965;Parent=gene-NIV78_RS20965;anticodon=(pos:823102..823104);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS20965;product=tRNA-Met NZ_CP100137.1 tRNAscan-SE exon 823069 823144 . + . ID=exon-NIV78_RS20965-1;Parent=rna-NIV78_RS20965;anticodon=(pos:823102..823104);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS20965;product=tRNA-Met NZ_CP100137.1 RefSeq gene 823455 823814 . + . ID=gene-NIV78_RS20970;Name=NIV78_RS20970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20970 NZ_CP100137.1 Protein Homology CDS 823455 823814 . + 0 ID=cds-WP_251107465.1;Parent=gene-NIV78_RS20970;Dbxref=Genbank:WP_251107465.1;Name=WP_251107465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010931448.1;locus_tag=NIV78_RS20970;product=helix-turn-helix domain-containing protein;protein_id=WP_251107465.1;transl_table=11 NZ_CP100137.1 RefSeq gene 823811 824257 . + . ID=gene-NIV78_RS20975;Name=NIV78_RS20975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20975 NZ_CP100137.1 GeneMarkS-2+ CDS 823811 824257 . + 0 ID=cds-WP_257757896.1;Parent=gene-NIV78_RS20975;Dbxref=Genbank:WP_257757896.1;Name=WP_257757896.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS20975;product=hypothetical protein;protein_id=WP_257757896.1;transl_table=11 NZ_CP100137.1 RefSeq gene 824289 825526 . - . ID=gene-NIV78_RS20980;Name=NIV78_RS20980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20980 NZ_CP100137.1 Protein Homology CDS 825235 825526 . - 0 ID=cds-WP_088499505.1-2;Parent=gene-NIV78_RS20980;Dbxref=Genbank:WP_088499505.1;Name=WP_088499505.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558218.1;locus_tag=NIV78_RS20980;product=IS3 family transposase;protein_id=WP_088499505.1;transl_table=11 NZ_CP100137.1 Protein Homology CDS 824289 825235 . - 2 ID=cds-WP_088499505.1-2;Parent=gene-NIV78_RS20980;Dbxref=Genbank:WP_088499505.1;Name=WP_088499505.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558218.1;locus_tag=NIV78_RS20980;product=IS3 family transposase;protein_id=WP_088499505.1;transl_table=11 NZ_CP100137.1 cmsearch sequence_feature 825129 825245 . - . ID=id-NIV78_RS20980;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS20980 NZ_CP100137.1 RefSeq gene 825584 826411 . + . ID=gene-NIV78_RS20985;Name=NIV78_RS20985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20985 NZ_CP100137.1 GeneMarkS-2+ CDS 825584 826411 . + 0 ID=cds-WP_257757897.1;Parent=gene-NIV78_RS20985;Dbxref=Genbank:WP_257757897.1;Name=WP_257757897.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS20985;product=hypothetical protein;protein_id=WP_257757897.1;transl_table=11 NZ_CP100137.1 RefSeq gene 826412 827866 . + . ID=gene-NIV78_RS20990;Name=NIV78_RS20990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20990 NZ_CP100137.1 Protein Homology CDS 826412 827866 . + 0 ID=cds-WP_251107467.1;Parent=gene-NIV78_RS20990;Dbxref=Genbank:WP_251107467.1;Name=WP_251107467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403345.1;locus_tag=NIV78_RS20990;product=DUF1073 domain-containing protein;protein_id=WP_251107467.1;transl_table=11 NZ_CP100137.1 RefSeq gene 827909 828706 . + . ID=gene-NIV78_RS20995;Name=NIV78_RS20995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS20995 NZ_CP100137.1 Protein Homology CDS 827909 828706 . + 0 ID=cds-WP_257757909.1;Parent=gene-NIV78_RS20995;Dbxref=Genbank:WP_257757909.1;Name=WP_257757909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403346.1;locus_tag=NIV78_RS20995;product=hypothetical protein;protein_id=WP_257757909.1;transl_table=11 NZ_CP100137.1 RefSeq gene 828741 830753 . + . ID=gene-NIV78_RS21000;Name=NIV78_RS21000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21000 NZ_CP100137.1 Protein Homology CDS 828741 830753 . + 0 ID=cds-WP_257757910.1;Parent=gene-NIV78_RS21000;Dbxref=Genbank:WP_257757910.1;Name=WP_257757910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403347.1;locus_tag=NIV78_RS21000;product=DUF2213 domain-containing protein;protein_id=WP_257757910.1;transl_table=11 NZ_CP100137.1 RefSeq gene 830757 831356 . + . ID=gene-NIV78_RS21005;Name=NIV78_RS21005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21005 NZ_CP100137.1 Protein Homology CDS 830757 831356 . + 0 ID=cds-WP_070105601.1;Parent=gene-NIV78_RS21005;Dbxref=Genbank:WP_070105601.1;Name=WP_070105601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403348.1;locus_tag=NIV78_RS21005;product=hypothetical protein;protein_id=WP_070105601.1;transl_table=11 NZ_CP100137.1 RefSeq gene 831369 832394 . + . ID=gene-NIV78_RS21010;Name=NIV78_RS21010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21010 NZ_CP100137.1 Protein Homology CDS 831369 832394 . + 0 ID=cds-WP_251107470.1;Parent=gene-NIV78_RS21010;Dbxref=Genbank:WP_251107470.1;Name=WP_251107470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403349.1;locus_tag=NIV78_RS21010;product=DUF2184 domain-containing protein;protein_id=WP_251107470.1;transl_table=11 NZ_CP100137.1 RefSeq gene 832464 832982 . + . ID=gene-NIV78_RS21015;Name=NIV78_RS21015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21015 NZ_CP100137.1 Protein Homology CDS 832464 832982 . + 0 ID=cds-WP_070105603.1;Parent=gene-NIV78_RS21015;Dbxref=Genbank:WP_070105603.1;Name=WP_070105603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403350.1;locus_tag=NIV78_RS21015;product=hypothetical protein;protein_id=WP_070105603.1;transl_table=11 NZ_CP100137.1 RefSeq gene 833014 833442 . + . ID=gene-NIV78_RS21020;Name=NIV78_RS21020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21020 NZ_CP100137.1 Protein Homology CDS 833014 833442 . + 0 ID=cds-WP_251107471.1;Parent=gene-NIV78_RS21020;Dbxref=Genbank:WP_251107471.1;Name=WP_251107471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403351.1;locus_tag=NIV78_RS21020;product=hypothetical protein;protein_id=WP_251107471.1;transl_table=11 NZ_CP100137.1 RefSeq gene 833439 833876 . + . ID=gene-NIV78_RS21025;Name=NIV78_RS21025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21025 NZ_CP100137.1 GeneMarkS-2+ CDS 833439 833876 . + 0 ID=cds-WP_251119030.1;Parent=gene-NIV78_RS21025;Dbxref=Genbank:WP_251119030.1;Name=WP_251119030.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS21025;product=hypothetical protein;protein_id=WP_251119030.1;transl_table=11 NZ_CP100137.1 RefSeq gene 833876 834106 . + . ID=gene-NIV78_RS21030;Name=NIV78_RS21030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21030 NZ_CP100137.1 GeneMarkS-2+ CDS 833876 834106 . + 0 ID=cds-WP_257757911.1;Parent=gene-NIV78_RS21030;Dbxref=Genbank:WP_257757911.1;Name=WP_257757911.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS21030;product=hypothetical protein;protein_id=WP_257757911.1;transl_table=11 NZ_CP100137.1 RefSeq gene 834081 834898 . - . ID=gene-NIV78_RS21035;Name=NIV78_RS21035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21035 NZ_CP100137.1 Protein Homology CDS 834550 834898 . - 0 ID=cds-WP_257757507.1-2;Parent=gene-NIV78_RS21035;Dbxref=Genbank:WP_257757507.1;Name=WP_257757507.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS21035;product=IS5 family transposase;protein_id=WP_257757507.1;transl_table=11 NZ_CP100137.1 Protein Homology CDS 834081 834550 . - 2 ID=cds-WP_257757507.1-2;Parent=gene-NIV78_RS21035;Dbxref=Genbank:WP_257757507.1;Name=WP_257757507.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS21035;product=IS5 family transposase;protein_id=WP_257757507.1;transl_table=11 NZ_CP100137.1 RefSeq gene 834973 835752 . + . ID=gene-NIV78_RS21040;Name=NIV78_RS21040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21040 NZ_CP100137.1 Protein Homology CDS 834973 835752 . + 0 ID=cds-WP_257757912.1;Parent=gene-NIV78_RS21040;Dbxref=Genbank:WP_257757912.1;Name=WP_257757912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403353.1;locus_tag=NIV78_RS21040;product=hypothetical protein;protein_id=WP_257757912.1;transl_table=11 NZ_CP100137.1 RefSeq gene 835757 836050 . + . ID=gene-NIV78_RS21045;Name=NIV78_RS21045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21045 NZ_CP100137.1 GeneMarkS-2+ CDS 835757 836050 . + 0 ID=cds-WP_251107474.1;Parent=gene-NIV78_RS21045;Dbxref=Genbank:WP_251107474.1;Name=WP_251107474.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS21045;product=hypothetical protein;protein_id=WP_251107474.1;transl_table=11 NZ_CP100137.1 RefSeq gene 836069 837391 . + . ID=gene-NIV78_RS21050;Name=NIV78_RS21050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21050 NZ_CP100137.1 Protein Homology CDS 836069 837391 . + 0 ID=cds-WP_257757914.1;Parent=gene-NIV78_RS21050;Dbxref=Genbank:WP_257757914.1;Name=WP_257757914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403355.1;locus_tag=NIV78_RS21050;product=hypothetical protein;protein_id=WP_257757914.1;transl_table=11 NZ_CP100137.1 RefSeq gene 837403 837849 . + . ID=gene-NIV78_RS21055;Name=NIV78_RS21055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21055 NZ_CP100137.1 GeneMarkS-2+ CDS 837403 837849 . + 0 ID=cds-WP_257757915.1;Parent=gene-NIV78_RS21055;Dbxref=Genbank:WP_257757915.1;Name=WP_257757915.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS21055;product=hypothetical protein;protein_id=WP_257757915.1;transl_table=11 NZ_CP100137.1 RefSeq gene 837849 838433 . + . ID=gene-NIV78_RS21060;Name=NIV78_RS21060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21060 NZ_CP100137.1 Protein Homology CDS 837849 838433 . + 0 ID=cds-WP_244133257.1;Parent=gene-NIV78_RS21060;Dbxref=Genbank:WP_244133257.1;Name=WP_244133257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403358.1;locus_tag=NIV78_RS21060;product=hypothetical protein;protein_id=WP_244133257.1;transl_table=11 NZ_CP100137.1 RefSeq gene 838554 839288 . + . ID=gene-NIV78_RS21065;Name=NIV78_RS21065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21065 NZ_CP100137.1 GeneMarkS-2+ CDS 838554 839288 . + 0 ID=cds-WP_257757917.1;Parent=gene-NIV78_RS21065;Dbxref=Genbank:WP_257757917.1;Name=WP_257757917.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS21065;product=hypothetical protein;protein_id=WP_257757917.1;transl_table=11 NZ_CP100137.1 RefSeq gene 839294 840091 . - . ID=gene-NIV78_RS21070;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=NIV78_RS21070 NZ_CP100137.1 Protein Homology CDS 839294 840091 . - 0 ID=cds-WP_012732720.1-4;Parent=gene-NIV78_RS21070;Dbxref=Genbank:WP_012732720.1;Name=WP_012732720.1;Ontology_term=GO:0005524;gbkey=CDS;gene=istB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013700154.1;locus_tag=NIV78_RS21070;product=IS21-like element helper ATPase IstB;protein_id=WP_012732720.1;transl_table=11 NZ_CP100137.1 RefSeq gene 840084 841589 . - . ID=gene-NIV78_RS21075;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=NIV78_RS21075 NZ_CP100137.1 Protein Homology CDS 840084 841589 . - 0 ID=cds-WP_012732721.1-4;Parent=gene-NIV78_RS21075;Dbxref=Genbank:WP_012732721.1;Name=WP_012732721.1;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546517.1;locus_tag=NIV78_RS21075;product=IS21 family transposase;protein_id=WP_012732721.1;transl_table=11 NZ_CP100137.1 RefSeq gene 841724 842590 . + . ID=gene-NIV78_RS21080;Name=NIV78_RS21080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21080 NZ_CP100137.1 Protein Homology CDS 841724 842590 . + 0 ID=cds-WP_257757919.1;Parent=gene-NIV78_RS21080;Dbxref=Genbank:WP_257757919.1;Name=WP_257757919.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022021.2;locus_tag=NIV78_RS21080;product=P63C domain-containing protein;protein_id=WP_257757919.1;transl_table=11 NZ_CP100137.1 RefSeq gene 842702 843121 . - . ID=gene-NIV78_RS21085;Name=NIV78_RS21085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21085 NZ_CP100137.1 Protein Homology CDS 842702 843121 . - 0 ID=cds-WP_257757920.1;Parent=gene-NIV78_RS21085;Dbxref=Genbank:WP_257757920.1;Name=WP_257757920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007583253.1;locus_tag=NIV78_RS21085;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_257757920.1;transl_table=11 NZ_CP100137.1 RefSeq gene 843192 843377 . - . ID=gene-NIV78_RS21090;Name=NIV78_RS21090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21090 NZ_CP100137.1 Protein Homology CDS 843192 843377 . - 0 ID=cds-WP_251119048.1;Parent=gene-NIV78_RS21090;Dbxref=Genbank:WP_251119048.1;Name=WP_251119048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006386381.1;locus_tag=NIV78_RS21090;product=type II toxin-antitoxin system HicA family toxin;protein_id=WP_251119048.1;transl_table=11 NZ_CP100137.1 RefSeq gene 843543 844076 . - . ID=gene-NIV78_RS21095;Name=NIV78_RS21095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21095 NZ_CP100137.1 Protein Homology CDS 843543 844076 . - 0 ID=cds-WP_257757922.1;Parent=gene-NIV78_RS21095;Dbxref=Genbank:WP_257757922.1;Name=WP_257757922.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024252.2;locus_tag=NIV78_RS21095;product=helix-turn-helix domain-containing protein;protein_id=WP_257757922.1;transl_table=11 NZ_CP100137.1 RefSeq gene 844170 844355 . + . ID=gene-NIV78_RS21100;Name=NIV78_RS21100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21100 NZ_CP100137.1 Protein Homology CDS 844170 844355 . + 0 ID=cds-WP_257757923.1;Parent=gene-NIV78_RS21100;Dbxref=Genbank:WP_257757923.1;Name=WP_257757923.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF015807.2;locus_tag=NIV78_RS21100;product=Arc family DNA-binding protein;protein_id=WP_257757923.1;transl_table=11 NZ_CP100137.1 RefSeq gene 844376 844693 . + . ID=gene-NIV78_RS21105;Name=NIV78_RS21105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21105 NZ_CP100137.1 GeneMarkS-2+ CDS 844376 844693 . + 0 ID=cds-WP_257757925.1;Parent=gene-NIV78_RS21105;Dbxref=Genbank:WP_257757925.1;Name=WP_257757925.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS21105;product=hypothetical protein;protein_id=WP_257757925.1;transl_table=11 NZ_CP100137.1 RefSeq gene 844686 844964 . + . ID=gene-NIV78_RS21110;Name=NIV78_RS21110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21110 NZ_CP100137.1 Protein Homology CDS 844686 844964 . + 0 ID=cds-WP_257757926.1;Parent=gene-NIV78_RS21110;Dbxref=Genbank:WP_257757926.1;Name=WP_257757926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216690.1;locus_tag=NIV78_RS21110;product=hypothetical protein;protein_id=WP_257757926.1;transl_table=11 NZ_CP100137.1 RefSeq gene 844957 845235 . + . ID=gene-NIV78_RS21115;Name=NIV78_RS21115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21115 NZ_CP100137.1 GeneMarkS-2+ CDS 844957 845235 . + 0 ID=cds-WP_257757928.1;Parent=gene-NIV78_RS21115;Dbxref=Genbank:WP_257757928.1;Name=WP_257757928.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS21115;product=hypothetical protein;protein_id=WP_257757928.1;transl_table=11 NZ_CP100137.1 RefSeq gene 845228 845890 . + . ID=gene-NIV78_RS21120;Name=NIV78_RS21120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21120 NZ_CP100137.1 Protein Homology CDS 845228 845890 . + 0 ID=cds-WP_257757930.1;Parent=gene-NIV78_RS21120;Dbxref=Genbank:WP_257757930.1;Name=WP_257757930.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016283.2;locus_tag=NIV78_RS21120;product=KilA-N domain-containing protein;protein_id=WP_257757930.1;transl_table=11 NZ_CP100137.1 RefSeq gene 845893 846462 . + . ID=gene-NIV78_RS21125;Name=NIV78_RS21125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21125 NZ_CP100137.1 GeneMarkS-2+ CDS 845893 846462 . + 0 ID=cds-WP_257757932.1;Parent=gene-NIV78_RS21125;Dbxref=Genbank:WP_257757932.1;Name=WP_257757932.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS21125;product=hypothetical protein;protein_id=WP_257757932.1;transl_table=11 NZ_CP100137.1 RefSeq gene 846459 846914 . + . ID=gene-NIV78_RS21130;Name=NIV78_RS21130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21130 NZ_CP100137.1 GeneMarkS-2+ CDS 846459 846914 . + 0 ID=cds-WP_251119056.1;Parent=gene-NIV78_RS21130;Dbxref=Genbank:WP_251119056.1;Name=WP_251119056.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS21130;product=hypothetical protein;protein_id=WP_251119056.1;transl_table=11 NZ_CP100137.1 RefSeq gene 847842 848324 . + . ID=gene-NIV78_RS21135;Name=NIV78_RS21135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21135 NZ_CP100137.1 GeneMarkS-2+ CDS 847842 848324 . + 0 ID=cds-WP_251119057.1;Parent=gene-NIV78_RS21135;Dbxref=Genbank:WP_251119057.1;Name=WP_251119057.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS21135;product=hypothetical protein;protein_id=WP_251119057.1;transl_table=11 NZ_CP100137.1 RefSeq gene 848355 848678 . + . ID=gene-NIV78_RS21140;Name=NIV78_RS21140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21140 NZ_CP100137.1 GeneMarkS-2+ CDS 848355 848678 . + 0 ID=cds-WP_251119058.1;Parent=gene-NIV78_RS21140;Dbxref=Genbank:WP_251119058.1;Name=WP_251119058.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS21140;product=hypothetical protein;protein_id=WP_251119058.1;transl_table=11 NZ_CP100137.1 RefSeq gene 848685 849200 . + . ID=gene-NIV78_RS21145;Name=NIV78_RS21145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21145 NZ_CP100137.1 Protein Homology CDS 848685 849200 . + 0 ID=cds-WP_251119059.1;Parent=gene-NIV78_RS21145;Dbxref=Genbank:WP_251119059.1;Name=WP_251119059.1;Ontology_term=GO:0015031,GO:0051262,GO:0051082;gbkey=CDS;go_function=unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,protein tetramerization|0051262||IEA;inference=COORDINATES: protein motif:HMM:NF014599.2;locus_tag=NIV78_RS21145;product=protein-export chaperone SecB;protein_id=WP_251119059.1;transl_table=11 NZ_CP100137.1 RefSeq gene 849513 849770 . + . ID=gene-NIV78_RS21150;Name=NIV78_RS21150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21150 NZ_CP100137.1 Protein Homology CDS 849513 849770 . + 0 ID=cds-WP_251107491.1;Parent=gene-NIV78_RS21150;Dbxref=Genbank:WP_251107491.1;Name=WP_251107491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012401253.1;locus_tag=NIV78_RS21150;product=hypothetical protein;protein_id=WP_251107491.1;transl_table=11 NZ_CP100137.1 RefSeq gene 849767 850216 . + . ID=gene-NIV78_RS21155;Name=NIV78_RS21155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21155 NZ_CP100137.1 Protein Homology CDS 849767 850216 . + 0 ID=cds-WP_251119060.1;Parent=gene-NIV78_RS21155;Dbxref=Genbank:WP_251119060.1;Name=WP_251119060.1;Ontology_term=GO:0009253,GO:0016998,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003268744.1;locus_tag=NIV78_RS21155;product=glycoside hydrolase family protein;protein_id=WP_251119060.1;transl_table=11 NZ_CP100137.1 RefSeq gene 850277 850525 . + . ID=gene-NIV78_RS21160;Name=NIV78_RS21160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21160 NZ_CP100137.1 GeneMarkS-2+ CDS 850277 850525 . + 0 ID=cds-WP_257757934.1;Parent=gene-NIV78_RS21160;Dbxref=Genbank:WP_257757934.1;Name=WP_257757934.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS21160;product=hypothetical protein;protein_id=WP_257757934.1;transl_table=11 NZ_CP100137.1 RefSeq gene 850515 852071 . - . ID=gene-NIV78_RS21165;Name=NIV78_RS21165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21165 NZ_CP100137.1 Protein Homology CDS 850515 852071 . - 0 ID=cds-WP_012732752.1-4;Parent=gene-NIV78_RS21165;Dbxref=Genbank:WP_012732752.1;Name=WP_012732752.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875269.1;locus_tag=NIV78_RS21165;product=IS66 family transposase;protein_id=WP_012732752.1;transl_table=11 NZ_CP100137.1 RefSeq gene 852103 852453 . - . ID=gene-NIV78_RS21170;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=NIV78_RS21170 NZ_CP100137.1 Protein Homology CDS 852103 852453 . - 0 ID=cds-WP_012732753.1-4;Parent=gene-NIV78_RS21170;Dbxref=Genbank:WP_012732753.1;Name=WP_012732753.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: protein motif:HMM:NF017528.2;locus_tag=NIV78_RS21170;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_012732753.1;transl_table=11 NZ_CP100137.1 RefSeq gene 852429 852905 . - . ID=gene-NIV78_RS21175;Name=NIV78_RS21175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21175 NZ_CP100137.1 Protein Homology CDS 852429 852905 . - 0 ID=cds-WP_012734051.1-4;Parent=gene-NIV78_RS21175;Dbxref=Genbank:WP_012734051.1;Name=WP_012734051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699891.1;locus_tag=NIV78_RS21175;product=transposase;protein_id=WP_012734051.1;transl_table=11 NZ_CP100137.1 RefSeq gene 852969 853250 . + . ID=gene-NIV78_RS21180;Name=NIV78_RS21180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21180 NZ_CP100137.1 GeneMarkS-2+ CDS 852969 853250 . + 0 ID=cds-WP_257757935.1;Parent=gene-NIV78_RS21180;Dbxref=Genbank:WP_257757935.1;Name=WP_257757935.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS21180;product=hypothetical protein;protein_id=WP_257757935.1;transl_table=11 NZ_CP100137.1 RefSeq gene 853335 854591 . + . ID=gene-NIV78_RS21185;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=NIV78_RS21185 NZ_CP100137.1 Protein Homology CDS 853335 854591 . + 0 ID=cds-WP_012734039.1-6;Parent=gene-NIV78_RS21185;Dbxref=Genbank:WP_012734039.1;Name=WP_012734039.1;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476480.1;locus_tag=NIV78_RS21185;product=IS21 family transposase;protein_id=WP_012734039.1;transl_table=11 NZ_CP100137.1 RefSeq gene 854588 855454 . + . ID=gene-NIV78_RS21190;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=NIV78_RS21190 NZ_CP100137.1 Protein Homology CDS 854588 855454 . + 0 ID=cds-WP_012732871.1-6;Parent=gene-NIV78_RS21190;Dbxref=Genbank:WP_012732871.1;Name=WP_012732871.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476481.1;locus_tag=NIV78_RS21190;product=IS21-like element ISBcen28 family helper ATPase IstB;protein_id=WP_012732871.1;transl_table=11 NZ_CP100137.1 RefSeq gene 855660 855866 . + . ID=gene-NIV78_RS21195;Name=NIV78_RS21195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21195 NZ_CP100137.1 GeneMarkS-2+ CDS 855660 855866 . + 0 ID=cds-WP_251119062.1;Parent=gene-NIV78_RS21195;Dbxref=Genbank:WP_251119062.1;Name=WP_251119062.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS21195;product=hypothetical protein;protein_id=WP_251119062.1;transl_table=11 NZ_CP100137.1 RefSeq gene 855885 856325 . + . ID=gene-NIV78_RS21200;Name=NIV78_RS21200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21200 NZ_CP100137.1 Protein Homology CDS 855885 856325 . + 0 ID=cds-WP_251107495.1;Parent=gene-NIV78_RS21200;Dbxref=Genbank:WP_251107495.1;Name=WP_251107495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424238.1;locus_tag=NIV78_RS21200;product=hypothetical protein;protein_id=WP_251107495.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 856954 857209 . - . ID=gene-NIV78_RS21205;Name=NIV78_RS21205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS21205;pseudo=true NZ_CP100137.1 Protein Homology CDS 856954 857209 . - 0 ID=cds-NIV78_RS21205;Parent=gene-NIV78_RS21205;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691782.1;locus_tag=NIV78_RS21205;product=PAAR domain-containing protein;pseudo=true;transl_table=11 NZ_CP100137.1 RefSeq gene 857307 858511 . + . ID=gene-NIV78_RS21210;Name=NIV78_RS21210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21210 NZ_CP100137.1 Protein Homology CDS 857307 857622 . + 0 ID=cds-WP_085967296.1-2;Parent=gene-NIV78_RS21210;Dbxref=Genbank:WP_085967296.1;Name=WP_085967296.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558222.1;locus_tag=NIV78_RS21210;product=IS3 family transposase;protein_id=WP_085967296.1;transl_table=11 NZ_CP100137.1 Protein Homology CDS 857622 858511 . + 2 ID=cds-WP_085967296.1-2;Parent=gene-NIV78_RS21210;Dbxref=Genbank:WP_085967296.1;Name=WP_085967296.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558222.1;locus_tag=NIV78_RS21210;product=IS3 family transposase;protein_id=WP_085967296.1;transl_table=11 NZ_CP100137.1 RefSeq gene 858570 859100 . - . ID=gene-NIV78_RS21215;Name=NIV78_RS21215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21215 NZ_CP100137.1 GeneMarkS-2+ CDS 858570 859100 . - 0 ID=cds-WP_080630181.1;Parent=gene-NIV78_RS21215;Dbxref=Genbank:WP_080630181.1;Name=WP_080630181.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS21215;product=hypothetical protein;protein_id=WP_080630181.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 859192 859452 . + . ID=gene-NIV78_RS21220;Name=NIV78_RS21220;end_range=859452,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS21220;partial=true;pseudo=true;start_range=.,859192 NZ_CP100137.1 Protein Homology CDS 859192 859452 . + 0 ID=cds-NIV78_RS21220;Parent=gene-NIV78_RS21220;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=859452,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611121.1;locus_tag=NIV78_RS21220;partial=true;product=transposase;pseudo=true;start_range=.,859192;transl_table=11 NZ_CP100137.1 RefSeq gene 859489 860070 . - . ID=gene-NIV78_RS21225;Name=NIV78_RS21225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21225 NZ_CP100137.1 GeneMarkS-2+ CDS 859489 860070 . - 0 ID=cds-WP_124837508.1;Parent=gene-NIV78_RS21225;Dbxref=Genbank:WP_124837508.1;Name=WP_124837508.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS21225;product=hypothetical protein;protein_id=WP_124837508.1;transl_table=11 NZ_CP100137.1 RefSeq gene 860042 862777 . - . ID=gene-NIV78_RS21230;Name=NIV78_RS21230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21230 NZ_CP100137.1 Protein Homology CDS 860042 862777 . - 0 ID=cds-WP_251107604.1;Parent=gene-NIV78_RS21230;Dbxref=Genbank:WP_251107604.1;Name=WP_251107604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423600.1;locus_tag=NIV78_RS21230;product=cell wall hydrolase;protein_id=WP_251107604.1;transl_table=11 NZ_CP100137.1 RefSeq gene 862830 865337 . - . ID=gene-NIV78_RS21235;Name=NIV78_RS21235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21235 NZ_CP100137.1 Protein Homology CDS 862830 865337 . - 0 ID=cds-WP_251107603.1;Parent=gene-NIV78_RS21235;Dbxref=Genbank:WP_251107603.1;Name=WP_251107603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735341.1;locus_tag=NIV78_RS21235;product=type VI secretion system tip protein VgrG;protein_id=WP_251107603.1;transl_table=11 NZ_CP100137.1 RefSeq gene 865653 865841 . + . ID=gene-NIV78_RS21240;Name=NIV78_RS21240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21240 NZ_CP100137.1 GeneMarkS-2+ CDS 865653 865841 . + 0 ID=cds-WP_017432642.1;Parent=gene-NIV78_RS21240;Dbxref=Genbank:WP_017432642.1;Name=WP_017432642.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS21240;product=hypothetical protein;protein_id=WP_017432642.1;transl_table=11 NZ_CP100137.1 RefSeq gene 866613 866861 . - . ID=gene-NIV78_RS21245;Name=NIV78_RS21245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21245 NZ_CP100137.1 Protein Homology CDS 866613 866861 . - 0 ID=cds-WP_012733515.1;Parent=gene-NIV78_RS21245;Dbxref=Genbank:WP_012733515.1;Name=WP_012733515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733515.1;locus_tag=NIV78_RS21245;product=hypothetical protein;protein_id=WP_012733515.1;transl_table=11 NZ_CP100137.1 RefSeq gene 866921 868078 . - . ID=gene-NIV78_RS21250;Name=NIV78_RS21250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21250 NZ_CP100137.1 Protein Homology CDS 866921 868078 . - 0 ID=cds-WP_257757936.1;Parent=gene-NIV78_RS21250;Dbxref=Genbank:WP_257757936.1;Name=WP_257757936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424263.1;locus_tag=NIV78_RS21250;product=hypothetical protein;protein_id=WP_257757936.1;transl_table=11 NZ_CP100137.1 RefSeq gene 868239 869816 . + . ID=gene-NIV78_RS21255;Name=NIV78_RS21255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21255 NZ_CP100137.1 Protein Homology CDS 868239 869816 . + 0 ID=cds-WP_257757938.1;Parent=gene-NIV78_RS21255;Dbxref=Genbank:WP_257757938.1;Name=WP_257757938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020379733.1;locus_tag=NIV78_RS21255;product=helix-turn-helix transcriptional regulator;protein_id=WP_257757938.1;transl_table=11 NZ_CP100137.1 RefSeq gene 869976 870158 . + . ID=gene-NIV78_RS21260;Name=NIV78_RS21260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21260 NZ_CP100137.1 Protein Homology CDS 869976 870158 . + 0 ID=cds-WP_012733518.1;Parent=gene-NIV78_RS21260;Dbxref=Genbank:WP_012733518.1;Name=WP_012733518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733518.1;locus_tag=NIV78_RS21260;product=CsbD family protein;protein_id=WP_012733518.1;transl_table=11 NZ_CP100137.1 RefSeq gene 870356 871270 . - . ID=gene-NIV78_RS21265;Name=NIV78_RS21265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21265 NZ_CP100137.1 Protein Homology CDS 870356 871270 . - 0 ID=cds-WP_043225534.1;Parent=gene-NIV78_RS21265;Dbxref=Genbank:WP_043225534.1;Name=WP_043225534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424262.1;locus_tag=NIV78_RS21265;product=delta(1)-pyrroline-2-carboxylate reductase family protein;protein_id=WP_043225534.1;transl_table=11 NZ_CP100137.1 RefSeq gene 871485 872102 . - . ID=gene-NIV78_RS21270;Name=NIV78_RS21270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21270 NZ_CP100137.1 Protein Homology CDS 871485 872102 . - 0 ID=cds-WP_232734631.1;Parent=gene-NIV78_RS21270;Dbxref=Genbank:WP_232734631.1;Name=WP_232734631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733520.1;locus_tag=NIV78_RS21270;product=DUF1295 domain-containing protein;protein_id=WP_232734631.1;transl_table=11 NZ_CP100137.1 RefSeq gene 872346 873518 . - . ID=gene-NIV78_RS21275;Name=NIV78_RS21275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21275 NZ_CP100137.1 Protein Homology CDS 872346 873518 . - 0 ID=cds-WP_017424260.1;Parent=gene-NIV78_RS21275;Dbxref=Genbank:WP_017424260.1;Name=WP_017424260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733521.1;locus_tag=NIV78_RS21275;product=iron-containing alcohol dehydrogenase;protein_id=WP_017424260.1;transl_table=11 NZ_CP100137.1 RefSeq gene 873744 875132 . - . ID=gene-NIV78_RS21280;Name=NIV78_RS21280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21280 NZ_CP100137.1 Protein Homology CDS 873744 875132 . - 0 ID=cds-WP_012733522.1;Parent=gene-NIV78_RS21280;Dbxref=Genbank:WP_012733522.1;Name=WP_012733522.1;Ontology_term=GO:0005975,GO:0004650;gbkey=CDS;go_function=polygalacturonase activity|0004650||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733522.1;locus_tag=NIV78_RS21280;product=glycosyl hydrolase family 28 protein;protein_id=WP_012733522.1;transl_table=11 NZ_CP100137.1 RefSeq gene 875694 876890 . - . ID=gene-NIV78_RS21285;Name=NIV78_RS21285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21285 NZ_CP100137.1 Protein Homology CDS 875694 876890 . - 0 ID=cds-WP_045678765.1;Parent=gene-NIV78_RS21285;Dbxref=Genbank:WP_045678765.1;Name=WP_045678765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405031.1;locus_tag=NIV78_RS21285;product=transglycosylase SLT domain-containing protein;protein_id=WP_045678765.1;transl_table=11 NZ_CP100137.1 RefSeq gene 877107 877307 . + . ID=gene-NIV78_RS21290;Name=NIV78_RS21290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21290 NZ_CP100137.1 Protein Homology CDS 877107 877307 . + 0 ID=cds-WP_017423699.1;Parent=gene-NIV78_RS21290;Dbxref=Genbank:WP_017423699.1;Name=WP_017423699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423699.1;locus_tag=NIV78_RS21290;product=hypothetical protein;protein_id=WP_017423699.1;transl_table=11 NZ_CP100137.1 RefSeq gene 877350 878519 . - . ID=gene-NIV78_RS21295;Name=NIV78_RS21295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21295 NZ_CP100137.1 Protein Homology CDS 877350 878519 . - 0 ID=cds-WP_017923157.1;Parent=gene-NIV78_RS21295;Dbxref=Genbank:WP_017923157.1;Name=WP_017923157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013341541.1;locus_tag=NIV78_RS21295;product=glutathione-dependent formaldehyde dehydrogenase;protein_id=WP_017923157.1;transl_table=11 NZ_CP100137.1 RefSeq gene 878813 879310 . + . ID=gene-NIV78_RS21300;Name=NIV78_RS21300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21300 NZ_CP100137.1 Protein Homology CDS 878813 879310 . + 0 ID=cds-WP_012733524.1;Parent=gene-NIV78_RS21300;Dbxref=Genbank:WP_012733524.1;Name=WP_012733524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733524.1;locus_tag=NIV78_RS21300;product=DUF892 family protein;protein_id=WP_012733524.1;transl_table=11 NZ_CP100137.1 RefSeq gene 879589 879831 . + . ID=gene-NIV78_RS21305;Name=NIV78_RS21305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21305 NZ_CP100137.1 Protein Homology CDS 879589 879831 . + 0 ID=cds-WP_017423701.1;Parent=gene-NIV78_RS21305;Dbxref=Genbank:WP_017423701.1;Name=WP_017423701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372628.1;locus_tag=NIV78_RS21305;product=hypothetical protein;protein_id=WP_017423701.1;transl_table=11 NZ_CP100137.1 RefSeq gene 879881 880588 . + . ID=gene-NIV78_RS21310;Name=NIV78_RS21310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21310 NZ_CP100137.1 Protein Homology CDS 879881 880588 . + 0 ID=cds-WP_017423702.1;Parent=gene-NIV78_RS21310;Dbxref=Genbank:WP_017423702.1;Name=WP_017423702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733526.1;locus_tag=NIV78_RS21310;product=succinate dehydrogenase/fumarate reductase iron-sulfur subunit;protein_id=WP_017423702.1;transl_table=11 NZ_CP100137.1 RefSeq gene 880703 880948 . + . ID=gene-NIV78_RS21315;Name=NIV78_RS21315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21315 NZ_CP100137.1 Protein Homology CDS 880703 880948 . + 0 ID=cds-WP_257757943.1;Parent=gene-NIV78_RS21315;Dbxref=Genbank:WP_257757943.1;Name=WP_257757943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690746.1;locus_tag=NIV78_RS21315;product=DUF2795 domain-containing protein;protein_id=WP_257757943.1;transl_table=11 NZ_CP100137.1 RefSeq gene 880964 881845 . - . ID=gene-NIV78_RS21320;Name=NIV78_RS21320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21320 NZ_CP100137.1 Protein Homology CDS 880964 881845 . - 0 ID=cds-WP_012733528.1;Parent=gene-NIV78_RS21320;Dbxref=Genbank:WP_012733528.1;Name=WP_012733528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733528.1;locus_tag=NIV78_RS21320;product=LysR family transcriptional regulator;protein_id=WP_012733528.1;transl_table=11 NZ_CP100137.1 RefSeq gene 881969 883132 . + . ID=gene-NIV78_RS21325;Name=NIV78_RS21325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21325 NZ_CP100137.1 Protein Homology CDS 881969 883132 . + 0 ID=cds-WP_251107601.1;Parent=gene-NIV78_RS21325;Dbxref=Genbank:WP_251107601.1;Name=WP_251107601.1;Ontology_term=GO:0018849,GO:0018850;gbkey=CDS;go_function=muconate cycloisomerase activity|0018849||IEA,chloromuconate cycloisomerase activity|0018850||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733529.1;locus_tag=NIV78_RS21325;product=muconate/chloromuconate family cycloisomerase;protein_id=WP_251107601.1;transl_table=11 NZ_CP100137.1 RefSeq gene 883160 883450 . + . ID=gene-NIV78_RS21330;Name=catC;gbkey=Gene;gene=catC;gene_biotype=protein_coding;locus_tag=NIV78_RS21330 NZ_CP100137.1 Protein Homology CDS 883160 883450 . + 0 ID=cds-WP_012733530.1;Parent=gene-NIV78_RS21330;Dbxref=Genbank:WP_012733530.1;Name=WP_012733530.1;Ontology_term=GO:0042952,GO:0016159;gbkey=CDS;gene=catC;go_function=muconolactone delta-isomerase activity|0016159||IEA;go_process=beta-ketoadipate pathway|0042952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009238166.1;locus_tag=NIV78_RS21330;product=muconolactone Delta-isomerase;protein_id=WP_012733530.1;transl_table=11 NZ_CP100137.1 RefSeq gene 883495 884433 . + . ID=gene-NIV78_RS21335;Name=catA;gbkey=Gene;gene=catA;gene_biotype=protein_coding;locus_tag=NIV78_RS21335 NZ_CP100137.1 Protein Homology CDS 883495 884433 . + 0 ID=cds-WP_012733531.1;Parent=gene-NIV78_RS21335;Dbxref=Genbank:WP_012733531.1;Name=WP_012733531.1;Ontology_term=GO:0019615,GO:0018576;gbkey=CDS;gene=catA;go_function=catechol 1%2C2-dioxygenase activity|0018576||IEA;go_process=catechol catabolic process%2C ortho-cleavage|0019615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407851.1;locus_tag=NIV78_RS21335;product=catechol 1%2C2-dioxygenase;protein_id=WP_012733531.1;transl_table=11 NZ_CP100137.1 RefSeq gene 884512 885768 . + . ID=gene-NIV78_RS21340;Name=NIV78_RS21340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21340 NZ_CP100137.1 Protein Homology CDS 884512 885768 . + 0 ID=cds-WP_251107600.1;Parent=gene-NIV78_RS21340;Dbxref=Genbank:WP_251107600.1;Name=WP_251107600.1;Ontology_term=GO:0005525;gbkey=CDS;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006465068.1;locus_tag=NIV78_RS21340;product=50S ribosome-binding GTPase;protein_id=WP_251107600.1;transl_table=11 NZ_CP100137.1 RefSeq gene 885765 887426 . + . ID=gene-NIV78_RS21345;Name=NIV78_RS21345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21345 NZ_CP100137.1 Protein Homology CDS 885765 887426 . + 0 ID=cds-WP_251119148.1;Parent=gene-NIV78_RS21345;Dbxref=Genbank:WP_251119148.1;Name=WP_251119148.1;Ontology_term=GO:0005525;gbkey=CDS;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018434484.1;locus_tag=NIV78_RS21345;product=50S ribosome-binding GTPase;protein_id=WP_251119148.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 887799 888350 . + . ID=gene-NIV78_RS21350;Name=NIV78_RS21350;end_range=888350,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS21350;partial=true;pseudo=true;start_range=.,887799 NZ_CP100137.1 Protein Homology CDS 887799 888350 . + 0 ID=cds-NIV78_RS21350;Parent=gene-NIV78_RS21350;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=888350,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014973117.1;locus_tag=NIV78_RS21350;partial=true;product=ATP-binding protein;pseudo=true;start_range=.,887799;transl_table=11 NZ_CP100137.1 RefSeq gene 888391 890646 . - . ID=gene-NIV78_RS21355;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=NIV78_RS21355 NZ_CP100137.1 Protein Homology CDS 888391 890646 . - 0 ID=cds-WP_257757947.1;Parent=gene-NIV78_RS21355;Dbxref=Genbank:WP_257757947.1;Name=WP_257757947.1;Ontology_term=GO:0005980,GO:0004133;gbkey=CDS;gene=glgX;go_function=glycogen debranching enzyme activity|0004133||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733534.1;locus_tag=NIV78_RS21355;product=glycogen debranching protein GlgX;protein_id=WP_257757947.1;transl_table=11 NZ_CP100137.1 RefSeq gene 891015 892976 . - . ID=gene-NIV78_RS21360;Name=NIV78_RS21360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21360 NZ_CP100137.1 Protein Homology CDS 891015 892976 . - 0 ID=cds-WP_051071188.1;Parent=gene-NIV78_RS21360;Dbxref=Genbank:WP_051071188.1;Name=WP_051071188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698054.1;locus_tag=NIV78_RS21360;product=glycoside hydrolase family 28 protein;protein_id=WP_051071188.1;transl_table=11 NZ_CP100137.1 RefSeq gene 893662 895464 . - . ID=gene-NIV78_RS21365;Name=NIV78_RS21365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21365 NZ_CP100137.1 Protein Homology CDS 893662 895464 . - 0 ID=cds-WP_251107598.1;Parent=gene-NIV78_RS21365;Dbxref=Genbank:WP_251107598.1;Name=WP_251107598.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733536.1;locus_tag=NIV78_RS21365;product=diguanylate cyclase;protein_id=WP_251107598.1;transl_table=11 NZ_CP100137.1 RefSeq gene 895970 896368 . - . ID=gene-NIV78_RS21370;Name=NIV78_RS21370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21370 NZ_CP100137.1 Protein Homology CDS 895970 896368 . - 0 ID=cds-WP_012733537.1;Parent=gene-NIV78_RS21370;Dbxref=Genbank:WP_012733537.1;Name=WP_012733537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018423488.1;locus_tag=NIV78_RS21370;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_012733537.1;transl_table=11 NZ_CP100137.1 RefSeq gene 896861 897781 . - . ID=gene-NIV78_RS21375;Name=NIV78_RS21375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21375 NZ_CP100137.1 Protein Homology CDS 896861 897781 . - 0 ID=cds-WP_017924326.1;Parent=gene-NIV78_RS21375;Dbxref=Genbank:WP_017924326.1;Name=WP_017924326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733538.1;locus_tag=NIV78_RS21375;product=alpha/beta hydrolase;protein_id=WP_017924326.1;transl_table=11 NZ_CP100137.1 RefSeq gene 897868 898254 . + . ID=gene-NIV78_RS21380;Name=NIV78_RS21380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21380 NZ_CP100137.1 Protein Homology CDS 897868 898254 . + 0 ID=cds-WP_017924327.1;Parent=gene-NIV78_RS21380;Dbxref=Genbank:WP_017924327.1;Name=WP_017924327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733539.1;locus_tag=NIV78_RS21380;product=MerR family transcriptional regulator;protein_id=WP_017924327.1;transl_table=11 NZ_CP100137.1 RefSeq gene 898406 904327 . + . ID=gene-NIV78_RS21385;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=NIV78_RS21385 NZ_CP100137.1 Protein Homology CDS 898406 904327 . + 0 ID=cds-WP_251107597.1;Parent=gene-NIV78_RS21385;Dbxref=Genbank:WP_251107597.1;Name=WP_251107597.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrA;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733540.1;locus_tag=NIV78_RS21385;product=excinuclease ABC subunit UvrA;protein_id=WP_251107597.1;transl_table=11 NZ_CP100137.1 RefSeq gene 904685 906166 . - . ID=gene-NIV78_RS21390;Name=NIV78_RS21390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21390 NZ_CP100137.1 Protein Homology CDS 904685 906166 . - 0 ID=cds-WP_012733541.1;Parent=gene-NIV78_RS21390;Dbxref=Genbank:WP_012733541.1;Name=WP_012733541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423882.1;locus_tag=NIV78_RS21390;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=WP_012733541.1;transl_table=11 NZ_CP100137.1 RefSeq gene 906491 907546 . + . ID=gene-NIV78_RS21395;Name=NIV78_RS21395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21395 NZ_CP100137.1 Protein Homology CDS 906491 907546 . + 0 ID=cds-WP_012733542.1;Parent=gene-NIV78_RS21395;Dbxref=Genbank:WP_012733542.1;Name=WP_012733542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733542.1;locus_tag=NIV78_RS21395;product=ligase-associated DNA damage response exonuclease;protein_id=WP_012733542.1;transl_table=11 NZ_CP100137.1 RefSeq gene 907543 909216 . + . ID=gene-NIV78_RS21400;Name=NIV78_RS21400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21400 NZ_CP100137.1 Protein Homology CDS 907543 909216 . + 0 ID=cds-WP_251107596.1;Parent=gene-NIV78_RS21400;Dbxref=Genbank:WP_251107596.1;Name=WP_251107596.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0003910,GO:0005524;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA ligase (ATP) activity|0003910||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020067852.1;locus_tag=NIV78_RS21400;product=ATP-dependent DNA ligase;protein_id=WP_251107596.1;transl_table=11 NZ_CP100137.1 RefSeq gene 909348 911990 . + . ID=gene-NIV78_RS21405;Name=NIV78_RS21405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21405 NZ_CP100137.1 Protein Homology CDS 909348 911990 . + 0 ID=cds-WP_251107916.1;Parent=gene-NIV78_RS21405;Dbxref=Genbank:WP_251107916.1;Name=WP_251107916.1;Ontology_term=GO:0003676,GO:0016818;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733544.1;locus_tag=NIV78_RS21405;product=ligase-associated DNA damage response DEXH box helicase;protein_id=WP_251107916.1;transl_table=11 NZ_CP100137.1 RefSeq gene 911983 912651 . + . ID=gene-NIV78_RS21410;Name=pdeM;gbkey=Gene;gene=pdeM;gene_biotype=protein_coding;locus_tag=NIV78_RS21410 NZ_CP100137.1 Protein Homology CDS 911983 912651 . + 0 ID=cds-WP_039201545.1;Parent=gene-NIV78_RS21410;Dbxref=Genbank:WP_039201545.1;Name=WP_039201545.1;Ontology_term=GO:0016787;gbkey=CDS;gene=pdeM;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733545.1;locus_tag=NIV78_RS21410;product=ligase-associated DNA damage response endonuclease PdeM;protein_id=WP_039201545.1;transl_table=11 NZ_CP100137.1 RefSeq gene 912837 913313 . + . ID=gene-NIV78_RS21415;Name=NIV78_RS21415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21415 NZ_CP100137.1 Protein Homology CDS 912837 913313 . + 0 ID=cds-WP_017425206.1;Parent=gene-NIV78_RS21415;Dbxref=Genbank:WP_017425206.1;Name=WP_017425206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425206.1;locus_tag=NIV78_RS21415;product=hypothetical protein;protein_id=WP_017425206.1;transl_table=11 NZ_CP100137.1 RefSeq gene 914239 915210 . + . ID=gene-NIV78_RS21420;Name=NIV78_RS21420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21420 NZ_CP100137.1 Protein Homology CDS 914239 915210 . + 0 ID=cds-WP_043226894.1;Parent=gene-NIV78_RS21420;Dbxref=Genbank:WP_043226894.1;Name=WP_043226894.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020379809.1;locus_tag=NIV78_RS21420;product=sigma 54-interacting transcriptional regulator;protein_id=WP_043226894.1;transl_table=11 NZ_CP100137.1 RefSeq gene 915274 915510 . + . ID=gene-NIV78_RS21425;Name=NIV78_RS21425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21425 NZ_CP100137.1 Protein Homology CDS 915274 915510 . + 0 ID=cds-WP_017425208.1;Parent=gene-NIV78_RS21425;Dbxref=Genbank:WP_017425208.1;Name=WP_017425208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425208.1;locus_tag=NIV78_RS21425;product=hypothetical protein;protein_id=WP_017425208.1;transl_table=11 NZ_CP100137.1 RefSeq gene 915539 915817 . - . ID=gene-NIV78_RS21430;Name=NIV78_RS21430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21430 NZ_CP100137.1 Protein Homology CDS 915539 915817 . - 0 ID=cds-WP_017425209.1;Parent=gene-NIV78_RS21430;Dbxref=Genbank:WP_017425209.1;Name=WP_017425209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425209.1;locus_tag=NIV78_RS21430;product=DUF6150 family protein;protein_id=WP_017425209.1;transl_table=11 NZ_CP100137.1 RefSeq gene 915945 916319 . + . ID=gene-NIV78_RS21435;Name=NIV78_RS21435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21435 NZ_CP100137.1 GeneMarkS-2+ CDS 915945 916319 . + 0 ID=cds-WP_127913860.1;Parent=gene-NIV78_RS21435;Dbxref=Genbank:WP_127913860.1;Name=WP_127913860.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS21435;product=hypothetical protein;protein_id=WP_127913860.1;transl_table=11 NZ_CP100137.1 RefSeq gene 916378 916761 . - . ID=gene-NIV78_RS21440;Name=NIV78_RS21440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21440 NZ_CP100137.1 Protein Homology CDS 916378 916761 . - 0 ID=cds-WP_234038096.1;Parent=gene-NIV78_RS21440;Dbxref=Genbank:WP_234038096.1;Name=WP_234038096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425017.1;locus_tag=NIV78_RS21440;product=hypothetical protein;protein_id=WP_234038096.1;transl_table=11 NZ_CP100137.1 RefSeq gene 916910 917272 . - . ID=gene-NIV78_RS21445;Name=NIV78_RS21445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21445 NZ_CP100137.1 GeneMarkS-2+ CDS 916910 917272 . - 0 ID=cds-WP_043308151.1;Parent=gene-NIV78_RS21445;Dbxref=Genbank:WP_043308151.1;Name=WP_043308151.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS21445;product=hypothetical protein;protein_id=WP_043308151.1;transl_table=11 NZ_CP100137.1 RefSeq gene 917556 917876 . + . ID=gene-NIV78_RS21450;Name=NIV78_RS21450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21450 NZ_CP100137.1 GeneMarkS-2+ CDS 917556 917876 . + 0 ID=cds-WP_153478680.1;Parent=gene-NIV78_RS21450;Dbxref=Genbank:WP_153478680.1;Name=WP_153478680.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS21450;product=hypothetical protein;protein_id=WP_153478680.1;transl_table=11 NZ_CP100137.1 RefSeq gene 917917 919035 . - . ID=gene-NIV78_RS21455;Name=NIV78_RS21455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21455 NZ_CP100137.1 Protein Homology CDS 917917 919035 . - 0 ID=cds-WP_017922805.1;Parent=gene-NIV78_RS21455;Dbxref=Genbank:WP_017922805.1;Name=WP_017922805.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024698.2;locus_tag=NIV78_RS21455;product=GNAT family N-acetyltransferase;protein_id=WP_017922805.1;transl_table=11 NZ_CP100137.1 RefSeq gene 919066 920205 . - . ID=gene-NIV78_RS21460;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=NIV78_RS21460 NZ_CP100137.1 Protein Homology CDS 919066 920205 . - 0 ID=cds-WP_017922806.1;Parent=gene-NIV78_RS21460;Dbxref=Genbank:WP_017922806.1;Name=WP_017922806.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733547.1;locus_tag=NIV78_RS21460;product=type VI secretion system protein TssA;protein_id=WP_017922806.1;transl_table=11 NZ_CP100137.1 RefSeq gene 920202 924221 . - . ID=gene-NIV78_RS21465;Name=NIV78_RS21465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21465 NZ_CP100137.1 Protein Homology CDS 920202 924221 . - 0 ID=cds-WP_257757950.1;Parent=gene-NIV78_RS21465;Dbxref=Genbank:WP_257757950.1;Name=WP_257757950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733548.1;locus_tag=NIV78_RS21465;product=type VI secretion system protein;protein_id=WP_257757950.1;transl_table=11 NZ_CP100137.1 RefSeq gene 924247 925026 . - . ID=gene-NIV78_RS21470;Name=NIV78_RS21470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21470 NZ_CP100137.1 Protein Homology CDS 924247 925026 . - 0 ID=cds-WP_012733549.1;Parent=gene-NIV78_RS21470;Dbxref=Genbank:WP_012733549.1;Name=WP_012733549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733549.1;locus_tag=NIV78_RS21470;product=DotU family type IV/VI secretion system protein;protein_id=WP_012733549.1;transl_table=11 NZ_CP100137.1 RefSeq gene 925019 926467 . - . ID=gene-NIV78_RS21475;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=NIV78_RS21475 NZ_CP100137.1 Protein Homology CDS 925019 926467 . - 0 ID=cds-WP_241766808.1;Parent=gene-NIV78_RS21475;Dbxref=Genbank:WP_241766808.1;Name=WP_241766808.1;gbkey=CDS;gene=tssK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733550.1;locus_tag=NIV78_RS21475;product=type VI secretion system baseplate subunit TssK;protein_id=WP_241766808.1;transl_table=11 NZ_CP100137.1 RefSeq gene 926508 926978 . - . ID=gene-NIV78_RS21480;Name=NIV78_RS21480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21480 NZ_CP100137.1 Protein Homology CDS 926508 926978 . - 0 ID=cds-WP_017922808.1;Parent=gene-NIV78_RS21480;Dbxref=Genbank:WP_017922808.1;Name=WP_017922808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733551.1;locus_tag=NIV78_RS21480;product=hypothetical protein;protein_id=WP_017922808.1;transl_table=11 NZ_CP100137.1 RefSeq gene 926982 927380 . - . ID=gene-NIV78_RS21485;Name=NIV78_RS21485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21485 NZ_CP100137.1 Protein Homology CDS 926982 927380 . - 0 ID=cds-WP_012733552.1;Parent=gene-NIV78_RS21485;Dbxref=Genbank:WP_012733552.1;Name=WP_012733552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733552.1;locus_tag=NIV78_RS21485;product=DUF4150 domain-containing protein;protein_id=WP_012733552.1;transl_table=11 NZ_CP100137.1 RefSeq gene 927419 927976 . - . ID=gene-NIV78_RS21490;Name=NIV78_RS21490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21490 NZ_CP100137.1 Protein Homology CDS 927419 927976 . - 0 ID=cds-WP_017432325.1;Parent=gene-NIV78_RS21490;Dbxref=Genbank:WP_017432325.1;Name=WP_017432325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733553.1;locus_tag=NIV78_RS21490;product=DUF3540 domain-containing protein;protein_id=WP_017432325.1;transl_table=11 NZ_CP100137.1 RefSeq gene 927973 929043 . - . ID=gene-NIV78_RS21495;Name=NIV78_RS21495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21495 NZ_CP100137.1 Protein Homology CDS 927973 929043 . - 0 ID=cds-WP_012733554.1;Parent=gene-NIV78_RS21495;Dbxref=Genbank:WP_012733554.1;Name=WP_012733554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423030.1;locus_tag=NIV78_RS21495;product=pentapeptide repeat-containing protein;protein_id=WP_012733554.1;transl_table=11 NZ_CP100137.1 RefSeq gene 929040 931676 . - . ID=gene-NIV78_RS21500;Name=NIV78_RS21500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21500 NZ_CP100137.1 Protein Homology CDS 929040 931676 . - 0 ID=cds-WP_251107595.1;Parent=gene-NIV78_RS21500;Dbxref=Genbank:WP_251107595.1;Name=WP_251107595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733555.1;locus_tag=NIV78_RS21500;product=DUF2169 domain-containing protein;protein_id=WP_251107595.1;transl_table=11 NZ_CP100137.1 RefSeq gene 931683 934325 . - . ID=gene-NIV78_RS21505;Name=NIV78_RS21505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21505 NZ_CP100137.1 Protein Homology CDS 931683 934325 . - 0 ID=cds-WP_017924048.1;Parent=gene-NIV78_RS21505;Dbxref=Genbank:WP_017924048.1;Name=WP_017924048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733556.1;locus_tag=NIV78_RS21505;product=contractile injection system protein%2C VgrG/Pvc8 family;protein_id=WP_017924048.1;transl_table=11 NZ_CP100137.1 RefSeq gene 934322 935473 . - . ID=gene-NIV78_RS21510;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=NIV78_RS21510 NZ_CP100137.1 Protein Homology CDS 934322 935473 . - 0 ID=cds-WP_251107594.1;Parent=gene-NIV78_RS21510;Dbxref=Genbank:WP_251107594.1;Name=WP_251107594.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: protein motif:HMM:NF018675.2;locus_tag=NIV78_RS21510;product=type VI secretion system baseplate subunit TssG;protein_id=WP_251107594.1;transl_table=11 NZ_CP100137.1 RefSeq gene 935482 937332 . - . ID=gene-NIV78_RS21515;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=NIV78_RS21515 NZ_CP100137.1 Protein Homology CDS 935482 937332 . - 0 ID=cds-WP_017923578.1;Parent=gene-NIV78_RS21515;Dbxref=Genbank:WP_017923578.1;Name=WP_017923578.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssF;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733558.1;locus_tag=NIV78_RS21515;product=type VI secretion system baseplate subunit TssF;protein_id=WP_017923578.1;transl_table=11 NZ_CP100137.1 RefSeq gene 937340 937717 . - . ID=gene-NIV78_RS21520;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=NIV78_RS21520 NZ_CP100137.1 Protein Homology CDS 937340 937717 . - 0 ID=cds-WP_012733559.1;Parent=gene-NIV78_RS21520;Dbxref=Genbank:WP_012733559.1;Name=WP_012733559.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssE;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733559.1;locus_tag=NIV78_RS21520;product=type VI secretion system baseplate subunit TssE;protein_id=WP_012733559.1;transl_table=11 NZ_CP100137.1 RefSeq gene 937781 938338 . - . ID=gene-NIV78_RS21525;Name=NIV78_RS21525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21525 NZ_CP100137.1 Protein Homology CDS 937781 938338 . - 0 ID=cds-WP_012733560.1;Parent=gene-NIV78_RS21525;Dbxref=Genbank:WP_012733560.1;Name=WP_012733560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733560.1;locus_tag=NIV78_RS21525;product=type VI secretion system tube protein Hcp;protein_id=WP_012733560.1;transl_table=11 NZ_CP100137.1 RefSeq gene 938371 940551 . - . ID=gene-NIV78_RS21530;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=NIV78_RS21530 NZ_CP100137.1 Protein Homology CDS 938371 940551 . - 0 ID=cds-WP_026051597.1;Parent=gene-NIV78_RS21530;Dbxref=Genbank:WP_026051597.1;Name=WP_026051597.1;Ontology_term=GO:0033103,GO:0003674,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733561.1;locus_tag=NIV78_RS21530;product=type VI secretion system contractile sheath large subunit;protein_id=WP_026051597.1;transl_table=11 NZ_CP100137.1 RefSeq gene 941583 944885 . + . ID=gene-NIV78_RS21535;Name=NIV78_RS21535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21535 NZ_CP100137.1 Protein Homology CDS 941583 944885 . + 0 ID=cds-WP_251107592.1;Parent=gene-NIV78_RS21535;Dbxref=Genbank:WP_251107592.1;Name=WP_251107592.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733562.1;locus_tag=NIV78_RS21535;product=efflux RND transporter permease subunit;protein_id=WP_251107592.1;transl_table=11 NZ_CP100137.1 RefSeq gene 945111 947279 . - . ID=gene-NIV78_RS21540;Name=NIV78_RS21540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21540 NZ_CP100137.1 Protein Homology CDS 945111 947279 . - 0 ID=cds-WP_017924070.1;Parent=gene-NIV78_RS21540;Dbxref=Genbank:WP_017924070.1;Name=WP_017924070.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733563.1;locus_tag=NIV78_RS21540;product=malate synthase G;protein_id=WP_017924070.1;transl_table=11 NZ_CP100137.1 RefSeq gene 947432 947845 . - . ID=gene-NIV78_RS21545;Name=NIV78_RS21545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21545 NZ_CP100137.1 Protein Homology CDS 947432 947845 . - 0 ID=cds-WP_012733564.1;Parent=gene-NIV78_RS21545;Dbxref=Genbank:WP_012733564.1;Name=WP_012733564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733564.1;locus_tag=NIV78_RS21545;product=heme-binding protein;protein_id=WP_012733564.1;transl_table=11 NZ_CP100137.1 RefSeq gene 948236 949384 . - . ID=gene-NIV78_RS21550;Name=NIV78_RS21550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21550 NZ_CP100137.1 Protein Homology CDS 948236 949384 . - 0 ID=cds-WP_251107591.1;Parent=gene-NIV78_RS21550;Dbxref=Genbank:WP_251107591.1;Name=WP_251107591.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019976.2;locus_tag=NIV78_RS21550;product=NERD domain-containing protein;protein_id=WP_251107591.1;transl_table=11 NZ_CP100137.1 RefSeq gene 949650 950678 . - . ID=gene-NIV78_RS21555;Name=NIV78_RS21555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21555 NZ_CP100137.1 Protein Homology CDS 949650 950678 . - 0 ID=cds-WP_012733565.1;Parent=gene-NIV78_RS21555;Dbxref=Genbank:WP_012733565.1;Name=WP_012733565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733565.1;locus_tag=NIV78_RS21555;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_012733565.1;transl_table=11 NZ_CP100137.1 RefSeq gene 950950 952206 . - . ID=gene-NIV78_RS21560;Name=NIV78_RS21560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21560 NZ_CP100137.1 Protein Homology CDS 950950 952206 . - 0 ID=cds-WP_017424245.1;Parent=gene-NIV78_RS21560;Dbxref=Genbank:WP_017424245.1;Name=WP_017424245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424245.1;locus_tag=NIV78_RS21560;product=multidrug effflux MFS transporter;protein_id=WP_017424245.1;transl_table=11 NZ_CP100137.1 RefSeq gene 952612 954489 . - . ID=gene-NIV78_RS21565;Name=NIV78_RS21565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21565 NZ_CP100137.1 Protein Homology CDS 952612 954489 . - 0 ID=cds-WP_017923013.1;Parent=gene-NIV78_RS21565;Dbxref=Genbank:WP_017923013.1;Name=WP_017923013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489048.1;locus_tag=NIV78_RS21565;product=S53 family peptidase;protein_id=WP_017923013.1;transl_table=11 NZ_CP100137.1 RefSeq gene 956393 956713 . + . ID=gene-NIV78_RS21570;Name=NIV78_RS21570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21570 NZ_CP100137.1 Protein Homology CDS 956393 956713 . + 0 ID=cds-WP_012733568.1;Parent=gene-NIV78_RS21570;Dbxref=Genbank:WP_012733568.1;Name=WP_012733568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027590.1;locus_tag=NIV78_RS21570;product=hypothetical protein;protein_id=WP_012733568.1;transl_table=11 NZ_CP100137.1 RefSeq gene 956803 956985 . - . ID=gene-NIV78_RS21575;Name=NIV78_RS21575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21575 NZ_CP100137.1 GeneMarkS-2+ CDS 956803 956985 . - 0 ID=cds-WP_020379710.1;Parent=gene-NIV78_RS21575;Dbxref=Genbank:WP_020379710.1;Name=WP_020379710.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS21575;product=hypothetical protein;protein_id=WP_020379710.1;transl_table=11 NZ_CP100137.1 RefSeq gene 957267 957560 . + . ID=gene-NIV78_RS21580;Name=NIV78_RS21580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21580 NZ_CP100137.1 GeneMarkS-2+ CDS 957267 957560 . + 0 ID=cds-WP_124836923.1;Parent=gene-NIV78_RS21580;Dbxref=Genbank:WP_124836923.1;Name=WP_124836923.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS21580;product=hypothetical protein;protein_id=WP_124836923.1;transl_table=11 NZ_CP100137.1 RefSeq gene 957557 957835 . + . ID=gene-NIV78_RS21585;Name=NIV78_RS21585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21585 NZ_CP100137.1 Protein Homology CDS 957557 957835 . + 0 ID=cds-WP_017423912.1;Parent=gene-NIV78_RS21585;Dbxref=Genbank:WP_017423912.1;Name=WP_017423912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423912.1;locus_tag=NIV78_RS21585;product=hypothetical protein;protein_id=WP_017423912.1;transl_table=11 NZ_CP100137.1 RefSeq gene 958104 958625 . - . ID=gene-NIV78_RS21590;Name=NIV78_RS21590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21590 NZ_CP100137.1 Protein Homology CDS 958104 958625 . - 0 ID=cds-WP_012733569.1;Parent=gene-NIV78_RS21590;Dbxref=Genbank:WP_012733569.1;Name=WP_012733569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752709.1;locus_tag=NIV78_RS21590;product=hypothetical protein;protein_id=WP_012733569.1;transl_table=11 NZ_CP100137.1 RefSeq gene 958923 960533 . - . ID=gene-NIV78_RS21595;Name=NIV78_RS21595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21595 NZ_CP100137.1 Protein Homology CDS 958923 960533 . - 0 ID=cds-WP_012733570.1;Parent=gene-NIV78_RS21595;Dbxref=Genbank:WP_012733570.1;Name=WP_012733570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733570.1;locus_tag=NIV78_RS21595;product=DUF2957 domain-containing protein;protein_id=WP_012733570.1;transl_table=11 NZ_CP100137.1 RefSeq gene 961346 961660 . + . ID=gene-NIV78_RS21600;Name=NIV78_RS21600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21600 NZ_CP100137.1 Protein Homology CDS 961346 961660 . + 0 ID=cds-WP_012733571.1;Parent=gene-NIV78_RS21600;Dbxref=Genbank:WP_012733571.1;Name=WP_012733571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733571.1;locus_tag=NIV78_RS21600;product=winged helix-turn-helix domain-containing protein;protein_id=WP_012733571.1;transl_table=11 NZ_CP100137.1 RefSeq gene 962075 962935 . + . ID=gene-NIV78_RS21605;Name=NIV78_RS21605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21605 NZ_CP100137.1 Protein Homology CDS 962075 962935 . + 0 ID=cds-WP_017923014.1;Parent=gene-NIV78_RS21605;Dbxref=Genbank:WP_017923014.1;Name=WP_017923014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733572.1;locus_tag=NIV78_RS21605;product=alpha/beta fold hydrolase;protein_id=WP_017923014.1;transl_table=11 NZ_CP100137.1 RefSeq gene 963126 964610 . - . ID=gene-NIV78_RS21610;Name=NIV78_RS21610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21610 NZ_CP100137.1 Protein Homology CDS 963126 964610 . - 0 ID=cds-WP_017924075.1;Parent=gene-NIV78_RS21610;Dbxref=Genbank:WP_017924075.1;Name=WP_017924075.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733573.1;locus_tag=NIV78_RS21610;product=aldehyde dehydrogenase family protein;protein_id=WP_017924075.1;transl_table=11 NZ_CP100137.1 RefSeq gene 964766 965602 . - . ID=gene-NIV78_RS21615;Name=NIV78_RS21615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21615 NZ_CP100137.1 Protein Homology CDS 964766 965602 . - 0 ID=cds-WP_017924076.1;Parent=gene-NIV78_RS21615;Dbxref=Genbank:WP_017924076.1;Name=WP_017924076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733574.1;locus_tag=NIV78_RS21615;product=helix-turn-helix transcriptional regulator;protein_id=WP_017924076.1;transl_table=11 NZ_CP100137.1 RefSeq gene 965799 966143 . + . ID=gene-NIV78_RS21620;Name=NIV78_RS21620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21620 NZ_CP100137.1 Protein Homology CDS 965799 966143 . + 0 ID=cds-WP_012733575.1;Parent=gene-NIV78_RS21620;Dbxref=Genbank:WP_012733575.1;Name=WP_012733575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397739.1;locus_tag=NIV78_RS21620;product=cupin domain-containing protein;protein_id=WP_012733575.1;transl_table=11 NZ_CP100137.1 RefSeq gene 966395 967744 . + . ID=gene-NIV78_RS21625;Name=NIV78_RS21625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21625 NZ_CP100137.1 Protein Homology CDS 966395 967744 . + 0 ID=cds-WP_251107915.1;Parent=gene-NIV78_RS21625;Dbxref=Genbank:WP_251107915.1;Name=WP_251107915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356375.1;locus_tag=NIV78_RS21625;product=FAD-dependent oxidoreductase;protein_id=WP_251107915.1;transl_table=11 NZ_CP100137.1 RefSeq gene 967903 969504 . + . ID=gene-NIV78_RS21630;Name=NIV78_RS21630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21630 NZ_CP100137.1 Protein Homology CDS 967903 969504 . + 0 ID=cds-WP_012733577.1;Parent=gene-NIV78_RS21630;Dbxref=Genbank:WP_012733577.1;Name=WP_012733577.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733577.1;locus_tag=NIV78_RS21630;product=cytosine permease;protein_id=WP_012733577.1;transl_table=11 NZ_CP100137.1 RefSeq gene 969974 970885 . + . ID=gene-NIV78_RS21635;Name=NIV78_RS21635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21635 NZ_CP100137.1 Protein Homology CDS 969974 970885 . + 0 ID=cds-WP_124836919.1;Parent=gene-NIV78_RS21635;Dbxref=Genbank:WP_124836919.1;Name=WP_124836919.1;Ontology_term=GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733578.1;locus_tag=NIV78_RS21635;product=NAD-dependent protein deacetylase;protein_id=WP_124836919.1;transl_table=11 NZ_CP100137.1 RefSeq gene 971133 971798 . + . ID=gene-NIV78_RS21640;Name=NIV78_RS21640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21640 NZ_CP100137.1 Protein Homology CDS 971133 971798 . + 0 ID=cds-WP_017923823.1;Parent=gene-NIV78_RS21640;Dbxref=Genbank:WP_017923823.1;Name=WP_017923823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733579.1;locus_tag=NIV78_RS21640;product=DUF938 domain-containing protein;protein_id=WP_017923823.1;transl_table=11 NZ_CP100137.1 RefSeq gene 971895 973304 . + . ID=gene-NIV78_RS21645;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=NIV78_RS21645 NZ_CP100137.1 Protein Homology CDS 971895 973304 . + 0 ID=cds-WP_017923824.1;Parent=gene-NIV78_RS21645;Dbxref=Genbank:WP_017923824.1;Name=WP_017923824.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899993.1;locus_tag=NIV78_RS21645;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_017923824.1;transl_table=11 NZ_CP100137.1 RefSeq gene 973509 973838 . + . ID=gene-NIV78_RS21650;Name=NIV78_RS21650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21650 NZ_CP100137.1 Protein Homology CDS 973509 973838 . + 0 ID=cds-WP_257757957.1;Parent=gene-NIV78_RS21650;Dbxref=Genbank:WP_257757957.1;Name=WP_257757957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603870.1;locus_tag=NIV78_RS21650;product=DUF4148 domain-containing protein;protein_id=WP_257757957.1;transl_table=11 NZ_CP100137.1 RefSeq gene 974127 974438 . + . ID=gene-NIV78_RS21655;Name=NIV78_RS21655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21655 NZ_CP100137.1 Protein Homology CDS 974127 974438 . + 0 ID=cds-WP_012733582.1;Parent=gene-NIV78_RS21655;Dbxref=Genbank:WP_012733582.1;Name=WP_012733582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190911.1;locus_tag=NIV78_RS21655;product=cupin;protein_id=WP_012733582.1;transl_table=11 NZ_CP100137.1 RefSeq gene 974536 975315 . + . ID=gene-NIV78_RS21660;Name=NIV78_RS21660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21660 NZ_CP100137.1 Protein Homology CDS 974536 975315 . + 0 ID=cds-WP_012733583.1;Parent=gene-NIV78_RS21660;Dbxref=Genbank:WP_012733583.1;Name=WP_012733583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733583.1;locus_tag=NIV78_RS21660;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_012733583.1;transl_table=11 NZ_CP100137.1 RefSeq gene 975629 976165 . + . ID=gene-NIV78_RS21665;Name=NIV78_RS21665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21665 NZ_CP100137.1 Protein Homology CDS 975629 976165 . + 0 ID=cds-WP_012733584.1;Parent=gene-NIV78_RS21665;Dbxref=Genbank:WP_012733584.1;Name=WP_012733584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690605.1;locus_tag=NIV78_RS21665;product=cytochrome b;protein_id=WP_012733584.1;transl_table=11 NZ_CP100137.1 RefSeq gene 976627 977703 . + . ID=gene-NIV78_RS21670;Name=NIV78_RS21670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21670 NZ_CP100137.1 Protein Homology CDS 976627 977703 . + 0 ID=cds-WP_012733585.1;Parent=gene-NIV78_RS21670;Dbxref=Genbank:WP_012733585.1;Name=WP_012733585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754864.1;locus_tag=NIV78_RS21670;product=triacylglycerol lipase;protein_id=WP_012733585.1;transl_table=11 NZ_CP100137.1 RefSeq gene 977703 978761 . + . ID=gene-NIV78_RS21675;Name=NIV78_RS21675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21675 NZ_CP100137.1 Protein Homology CDS 977703 978761 . + 0 ID=cds-WP_251107590.1;Parent=gene-NIV78_RS21675;Dbxref=Genbank:WP_251107590.1;Name=WP_251107590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733586.1;locus_tag=NIV78_RS21675;product=lipase secretion chaperone;protein_id=WP_251107590.1;transl_table=11 NZ_CP100137.1 RefSeq gene 979125 980474 . + . ID=gene-NIV78_RS21680;Name=NIV78_RS21680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21680 NZ_CP100137.1 Protein Homology CDS 979125 980474 . + 0 ID=cds-WP_051071118.1;Parent=gene-NIV78_RS21680;Dbxref=Genbank:WP_051071118.1;Name=WP_051071118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487759.1;locus_tag=NIV78_RS21680;product=MFS transporter;protein_id=WP_051071118.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 980599 981027 . + . ID=gene-NIV78_RS21685;Name=NIV78_RS21685;end_range=981027,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS21685;partial=true;pseudo=true NZ_CP100137.1 Protein Homology CDS 980599 981027 . + 0 ID=cds-NIV78_RS21685;Parent=gene-NIV78_RS21685;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=981027,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612095.1;locus_tag=NIV78_RS21685;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP100137.1 RefSeq gene 981271 982071 . + . ID=gene-NIV78_RS21690;Name=NIV78_RS21690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21690 NZ_CP100137.1 Protein Homology CDS 981271 982071 . + 0 ID=cds-WP_017424724.1;Parent=gene-NIV78_RS21690;Dbxref=Genbank:WP_017424724.1;Name=WP_017424724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424724.1;locus_tag=NIV78_RS21690;product=class I SAM-dependent methyltransferase;protein_id=WP_017424724.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 982183 982707 . - . ID=gene-NIV78_RS21695;Name=NIV78_RS21695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS21695;pseudo=true NZ_CP100137.1 Protein Homology CDS 982183 982707 . - 0 ID=cds-NIV78_RS21695;Parent=gene-NIV78_RS21695;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734099.1;locus_tag=NIV78_RS21695;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP100137.1 RefSeq gene 982825 983727 . - . ID=gene-NIV78_RS21700;Name=NIV78_RS21700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21700 NZ_CP100137.1 Protein Homology CDS 982825 983727 . - 0 ID=cds-WP_017424723.1;Parent=gene-NIV78_RS21700;Dbxref=Genbank:WP_017424723.1;Name=WP_017424723.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424723.1;locus_tag=NIV78_RS21700;product=SDR family oxidoreductase;protein_id=WP_017424723.1;transl_table=11 NZ_CP100137.1 RefSeq gene 984261 984992 . - . ID=gene-NIV78_RS21705;Name=NIV78_RS21705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21705 NZ_CP100137.1 Protein Homology CDS 984261 984992 . - 0 ID=cds-WP_012733591.1;Parent=gene-NIV78_RS21705;Dbxref=Genbank:WP_012733591.1;Name=WP_012733591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349378.1;locus_tag=NIV78_RS21705;product=LytTR family DNA-binding domain-containing protein;protein_id=WP_012733591.1;transl_table=11 NZ_CP100137.1 RefSeq gene 984994 986067 . - . ID=gene-NIV78_RS21710;Name=NIV78_RS21710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21710 NZ_CP100137.1 Protein Homology CDS 984994 986067 . - 0 ID=cds-WP_017424721.1;Parent=gene-NIV78_RS21710;Dbxref=Genbank:WP_017424721.1;Name=WP_017424721.1;Ontology_term=GO:0000160,GO:0000155,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424721.1;locus_tag=NIV78_RS21710;product=histidine kinase;protein_id=WP_017424721.1;transl_table=11 NZ_CP100137.1 RefSeq gene 986298 986831 . + . ID=gene-NIV78_RS21715;Name=NIV78_RS21715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21715 NZ_CP100137.1 Protein Homology CDS 986298 986831 . + 0 ID=cds-WP_257757958.1;Parent=gene-NIV78_RS21715;Dbxref=Genbank:WP_257757958.1;Name=WP_257757958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733593.1;locus_tag=NIV78_RS21715;product=hypothetical protein;protein_id=WP_257757958.1;transl_table=11 NZ_CP100137.1 RefSeq gene 987021 988283 . - . ID=gene-NIV78_RS21720;Name=NIV78_RS21720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21720 NZ_CP100137.1 Protein Homology CDS 987021 988283 . - 0 ID=cds-WP_012733594.1;Parent=gene-NIV78_RS21720;Dbxref=Genbank:WP_012733594.1;Name=WP_012733594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349381.1;locus_tag=NIV78_RS21720;product=hypothetical protein;protein_id=WP_012733594.1;transl_table=11 NZ_CP100137.1 RefSeq gene 988287 989072 . - . ID=gene-NIV78_RS21725;Name=NIV78_RS21725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21725 NZ_CP100137.1 Protein Homology CDS 988287 989072 . - 0 ID=cds-WP_012733595.1;Parent=gene-NIV78_RS21725;Dbxref=Genbank:WP_012733595.1;Name=WP_012733595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733595.1;locus_tag=NIV78_RS21725;product=outer membrane lipoprotein-sorting protein;protein_id=WP_012733595.1;transl_table=11 NZ_CP100137.1 RefSeq gene 989088 990485 . - . ID=gene-NIV78_RS21730;Name=NIV78_RS21730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21730 NZ_CP100137.1 Protein Homology CDS 989088 990485 . - 0 ID=cds-WP_017922431.1;Parent=gene-NIV78_RS21730;Dbxref=Genbank:WP_017922431.1;Name=WP_017922431.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190565.1;locus_tag=NIV78_RS21730;product=FtsX-like permease family protein;protein_id=WP_017922431.1;transl_table=11 NZ_CP100137.1 RefSeq gene 990482 991186 . - . ID=gene-NIV78_RS21735;Name=NIV78_RS21735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21735 NZ_CP100137.1 Protein Homology CDS 990482 991186 . - 0 ID=cds-WP_012733597.1;Parent=gene-NIV78_RS21735;Dbxref=Genbank:WP_012733597.1;Name=WP_012733597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733597.1;locus_tag=NIV78_RS21735;product=ABC transporter ATP-binding protein;protein_id=WP_012733597.1;transl_table=11 NZ_CP100137.1 RefSeq gene 991568 992017 . + . ID=gene-NIV78_RS21740;Name=NIV78_RS21740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21740 NZ_CP100137.1 Protein Homology CDS 991568 992017 . + 0 ID=cds-WP_017922432.1;Parent=gene-NIV78_RS21740;Dbxref=Genbank:WP_017922432.1;Name=WP_017922432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733599.1;locus_tag=NIV78_RS21740;product=hypothetical protein;protein_id=WP_017922432.1;transl_table=11 NZ_CP100137.1 RefSeq gene 992014 992385 . + . ID=gene-NIV78_RS21745;Name=NIV78_RS21745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21745 NZ_CP100137.1 Protein Homology CDS 992014 992385 . + 0 ID=cds-WP_012733600.1;Parent=gene-NIV78_RS21745;Dbxref=Genbank:WP_012733600.1;Name=WP_012733600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349387.1;locus_tag=NIV78_RS21745;product=hotdog fold thioesterase;protein_id=WP_012733600.1;transl_table=11 NZ_CP100137.1 RefSeq gene 992382 993110 . + . ID=gene-NIV78_RS21750;Name=NIV78_RS21750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21750 NZ_CP100137.1 Protein Homology CDS 992382 993110 . + 0 ID=cds-WP_017423633.1;Parent=gene-NIV78_RS21750;Dbxref=Genbank:WP_017423633.1;Name=WP_017423633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349388.1;locus_tag=NIV78_RS21750;product=SDR family oxidoreductase;protein_id=WP_017423633.1;transl_table=11 NZ_CP100137.1 RefSeq gene 993136 993492 . + . ID=gene-NIV78_RS21755;Name=NIV78_RS21755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21755 NZ_CP100137.1 Protein Homology CDS 993136 993492 . + 0 ID=cds-WP_012733602.1;Parent=gene-NIV78_RS21755;Dbxref=Genbank:WP_012733602.1;Name=WP_012733602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733602.1;locus_tag=NIV78_RS21755;product=acyl carrier protein;protein_id=WP_012733602.1;transl_table=11 NZ_CP100137.1 RefSeq gene 993585 994682 . + . ID=gene-NIV78_RS21760;Name=NIV78_RS21760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21760 NZ_CP100137.1 Protein Homology CDS 993585 994682 . + 0 ID=cds-WP_017922433.1;Parent=gene-NIV78_RS21760;Dbxref=Genbank:WP_017922433.1;Name=WP_017922433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349390.1;locus_tag=NIV78_RS21760;product=beta-ketoacyl synthase;protein_id=WP_017922433.1;transl_table=11 NZ_CP100137.1 RefSeq gene 994679 995953 . + . ID=gene-NIV78_RS21765;Name=NIV78_RS21765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21765 NZ_CP100137.1 Protein Homology CDS 994679 995953 . + 0 ID=cds-WP_017922434.1;Parent=gene-NIV78_RS21765;Dbxref=Genbank:WP_017922434.1;Name=WP_017922434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733604.1;locus_tag=NIV78_RS21765;product=beta-ketoacyl-[acyl-carrier-protein] synthase family protein;protein_id=WP_017922434.1;transl_table=11 NZ_CP100137.1 RefSeq gene 995950 997416 . + . ID=gene-NIV78_RS21770;Name=NIV78_RS21770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21770 NZ_CP100137.1 Protein Homology CDS 995950 997416 . + 0 ID=cds-WP_017922435.1;Parent=gene-NIV78_RS21770;Dbxref=Genbank:WP_017922435.1;Name=WP_017922435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733605.1;locus_tag=NIV78_RS21770;product=AMP-binding protein;protein_id=WP_017922435.1;transl_table=11 NZ_CP100137.1 RefSeq gene 997349 998677 . + . ID=gene-NIV78_RS21775;Name=NIV78_RS21775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21775 NZ_CP100137.1 Protein Homology CDS 997349 998677 . + 0 ID=cds-WP_257757962.1;Parent=gene-NIV78_RS21775;Dbxref=Genbank:WP_257757962.1;Name=WP_257757962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733606.1;locus_tag=NIV78_RS21775;product=hypothetical protein;protein_id=WP_257757962.1;transl_table=11 NZ_CP100137.1 RefSeq gene 998670 1000097 . + . ID=gene-NIV78_RS21780;Name=NIV78_RS21780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21780 NZ_CP100137.1 Protein Homology CDS 998670 1000097 . + 0 ID=cds-WP_017423628.1;Parent=gene-NIV78_RS21780;Dbxref=Genbank:WP_017423628.1;Name=WP_017423628.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733607.1;locus_tag=NIV78_RS21780;product=MATE family efflux transporter;protein_id=WP_017423628.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1000142 1000813 . + . ID=gene-NIV78_RS21785;Name=NIV78_RS21785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21785 NZ_CP100137.1 Protein Homology CDS 1000142 1000813 . + 0 ID=cds-WP_017423627.1;Parent=gene-NIV78_RS21785;Dbxref=Genbank:WP_017423627.1;Name=WP_017423627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423627.1;locus_tag=NIV78_RS21785;product=class I SAM-dependent methyltransferase;protein_id=WP_017423627.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1000828 1002003 . + . ID=gene-NIV78_RS21790;Name=NIV78_RS21790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21790 NZ_CP100137.1 Protein Homology CDS 1000828 1002003 . + 0 ID=cds-WP_012733609.1;Parent=gene-NIV78_RS21790;Dbxref=Genbank:WP_012733609.1;Name=WP_012733609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733609.1;locus_tag=NIV78_RS21790;product=citrate/2-methylcitrate synthase;protein_id=WP_012733609.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1002053 1002922 . + . ID=gene-NIV78_RS21795;Name=NIV78_RS21795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21795 NZ_CP100137.1 Protein Homology CDS 1002053 1002922 . + 0 ID=cds-WP_017423625.1;Parent=gene-NIV78_RS21795;Dbxref=Genbank:WP_017423625.1;Name=WP_017423625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498177.1;locus_tag=NIV78_RS21795;product=class I SAM-dependent methyltransferase;protein_id=WP_017423625.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1002932 1003537 . + . ID=gene-NIV78_RS21800;Name=NIV78_RS21800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21800 NZ_CP100137.1 Protein Homology CDS 1002932 1003537 . + 0 ID=cds-WP_017922437.1;Parent=gene-NIV78_RS21800;Dbxref=Genbank:WP_017922437.1;Name=WP_017922437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733610.1;locus_tag=NIV78_RS21800;product=GNAT family N-acetyltransferase;protein_id=WP_017922437.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1004384 1006543 . + . ID=gene-NIV78_RS21805;Name=NIV78_RS21805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21805 NZ_CP100137.1 Protein Homology CDS 1004384 1006543 . + 0 ID=cds-WP_017922438.1;Parent=gene-NIV78_RS21805;Dbxref=Genbank:WP_017922438.1;Name=WP_017922438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733612.1;locus_tag=NIV78_RS21805;product=filamentous hemagglutinin N-terminal domain-containing protein;protein_id=WP_017922438.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1006540 1008306 . + . ID=gene-NIV78_RS21810;Name=NIV78_RS21810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21810 NZ_CP100137.1 Protein Homology CDS 1006540 1008306 . + 0 ID=cds-WP_017423623.1;Parent=gene-NIV78_RS21810;Dbxref=Genbank:WP_017423623.1;Name=WP_017423623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423623.1;locus_tag=NIV78_RS21810;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_017423623.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1008335 1009282 . + . ID=gene-NIV78_RS21815;Name=NIV78_RS21815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21815 NZ_CP100137.1 Protein Homology CDS 1008335 1009282 . + 0 ID=cds-WP_232734590.1;Parent=gene-NIV78_RS21815;Dbxref=Genbank:WP_232734590.1;Name=WP_232734590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423622.1;locus_tag=NIV78_RS21815;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_232734590.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1009419 1024637 . + . ID=gene-NIV78_RS21820;Name=NIV78_RS21820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21820 NZ_CP100137.1 Protein Homology CDS 1009419 1024637 . + 0 ID=cds-WP_257757965.1;Parent=gene-NIV78_RS21820;Dbxref=Genbank:WP_257757965.1;Name=WP_257757965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698422.1;locus_tag=NIV78_RS21820;product=filamentous hemagglutinin N-terminal domain-containing protein;protein_id=WP_257757965.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1024640 1025137 . + . ID=gene-NIV78_RS21825;Name=NIV78_RS21825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21825 NZ_CP100137.1 GeneMarkS-2+ CDS 1024640 1025137 . + 0 ID=cds-WP_257757967.1;Parent=gene-NIV78_RS21825;Dbxref=Genbank:WP_257757967.1;Name=WP_257757967.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS21825;product=hypothetical protein;protein_id=WP_257757967.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1025586 1026062 . + . ID=gene-NIV78_RS21830;Name=NIV78_RS21830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21830 NZ_CP100137.1 Protein Homology CDS 1025586 1026062 . + 0 ID=cds-WP_012734051.1-5;Parent=gene-NIV78_RS21830;Dbxref=Genbank:WP_012734051.1;Name=WP_012734051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699891.1;locus_tag=NIV78_RS21830;product=transposase;protein_id=WP_012734051.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1026038 1026388 . + . ID=gene-NIV78_RS21835;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=NIV78_RS21835 NZ_CP100137.1 Protein Homology CDS 1026038 1026388 . + 0 ID=cds-WP_012732753.1-5;Parent=gene-NIV78_RS21835;Dbxref=Genbank:WP_012732753.1;Name=WP_012732753.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: protein motif:HMM:NF017528.2;locus_tag=NIV78_RS21835;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_012732753.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1026420 1027976 . + . ID=gene-NIV78_RS21840;Name=NIV78_RS21840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21840 NZ_CP100137.1 Protein Homology CDS 1026420 1027976 . + 0 ID=cds-WP_012732752.1-5;Parent=gene-NIV78_RS21840;Dbxref=Genbank:WP_012732752.1;Name=WP_012732752.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875269.1;locus_tag=NIV78_RS21840;product=IS66 family transposase;protein_id=WP_012732752.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1028030 1028449 . + . ID=gene-NIV78_RS21845;Name=NIV78_RS21845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21845 NZ_CP100137.1 GeneMarkS-2+ CDS 1028030 1028449 . + 0 ID=cds-WP_257757969.1;Parent=gene-NIV78_RS21845;Dbxref=Genbank:WP_257757969.1;Name=WP_257757969.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS21845;product=hypothetical protein;protein_id=WP_257757969.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1028674 1029785 . + . ID=gene-NIV78_RS21850;Name=NIV78_RS21850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21850 NZ_CP100137.1 Protein Homology CDS 1028674 1028932 . + 0 ID=cds-WP_257757971.1;Parent=gene-NIV78_RS21850;Dbxref=Genbank:WP_257757971.1;Name=WP_257757971.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611495.1;locus_tag=NIV78_RS21850;product=IS3 family transposase;protein_id=WP_257757971.1;transl_table=11 NZ_CP100137.1 Protein Homology CDS 1028932 1029785 . + 2 ID=cds-WP_257757971.1;Parent=gene-NIV78_RS21850;Dbxref=Genbank:WP_257757971.1;Name=WP_257757971.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611495.1;locus_tag=NIV78_RS21850;product=IS3 family transposase;protein_id=WP_257757971.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 1029990 1030112 . - . ID=gene-NIV78_RS21855;Name=NIV78_RS21855;end_range=1030112,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS21855;partial=true;pseudo=true NZ_CP100137.1 Protein Homology CDS 1029990 1030112 . - 0 ID=cds-NIV78_RS21855;Parent=gene-NIV78_RS21855;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1030112,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732717.1;locus_tag=NIV78_RS21855;partial=true;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP100137.1 RefSeq gene 1030118 1031743 . + . ID=gene-NIV78_RS21860;Name=NIV78_RS21860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21860 NZ_CP100137.1 Protein Homology CDS 1030118 1031743 . + 0 ID=cds-WP_257757972.1;Parent=gene-NIV78_RS21860;Dbxref=Genbank:WP_257757972.1;Name=WP_257757972.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016703.2;locus_tag=NIV78_RS21860;product=DUF637 domain-containing protein;protein_id=WP_257757972.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1032341 1034530 . + . ID=gene-NIV78_RS21865;Name=NIV78_RS21865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21865 NZ_CP100137.1 Protein Homology CDS 1032341 1034530 . + 0 ID=cds-WP_251119142.1;Parent=gene-NIV78_RS21865;Dbxref=Genbank:WP_251119142.1;Name=WP_251119142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404283.1;locus_tag=NIV78_RS21865;product=DUF637 domain-containing protein;protein_id=WP_251119142.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1034533 1034757 . + . ID=gene-NIV78_RS21870;Name=NIV78_RS21870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21870 NZ_CP100137.1 Protein Homology CDS 1034533 1034757 . + 0 ID=cds-WP_012733619.1;Parent=gene-NIV78_RS21870;Dbxref=Genbank:WP_012733619.1;Name=WP_012733619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733619.1;locus_tag=NIV78_RS21870;product=hypothetical protein;protein_id=WP_012733619.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1034982 1035152 . - . ID=gene-NIV78_RS21875;Name=NIV78_RS21875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21875 NZ_CP100137.1 Protein Homology CDS 1034982 1035152 . - 0 ID=cds-WP_241766832.1;Parent=gene-NIV78_RS21875;Dbxref=Genbank:WP_241766832.1;Name=WP_241766832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413057.1;locus_tag=NIV78_RS21875;product=hypothetical protein;protein_id=WP_241766832.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1035350 1035565 . - . ID=gene-NIV78_RS21880;Name=NIV78_RS21880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21880 NZ_CP100137.1 Protein Homology CDS 1035350 1035565 . - 0 ID=cds-WP_017424981.1;Parent=gene-NIV78_RS21880;Dbxref=Genbank:WP_017424981.1;Name=WP_017424981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424981.1;locus_tag=NIV78_RS21880;product=hypothetical protein;protein_id=WP_017424981.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1035592 1035951 . + . ID=gene-NIV78_RS21885;Name=NIV78_RS21885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21885 NZ_CP100137.1 GeneMarkS-2+ CDS 1035592 1035951 . + 0 ID=cds-WP_257757975.1;Parent=gene-NIV78_RS21885;Dbxref=Genbank:WP_257757975.1;Name=WP_257757975.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS21885;product=hypothetical protein;protein_id=WP_257757975.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1035988 1036125 . - . ID=gene-NIV78_RS21890;Name=NIV78_RS21890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21890 NZ_CP100137.1 Protein Homology CDS 1035988 1036125 . - 0 ID=cds-WP_017924734.1-2;Parent=gene-NIV78_RS21890;Dbxref=Genbank:WP_017924734.1;Name=WP_017924734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400880.1;locus_tag=NIV78_RS21890;product=hypothetical protein;protein_id=WP_017924734.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1036174 1037724 . + . ID=gene-NIV78_RS21895;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=NIV78_RS21895 NZ_CP100137.1 Protein Homology CDS 1036174 1037724 . + 0 ID=cds-WP_153477359.1-2;Parent=gene-NIV78_RS21895;Dbxref=Genbank:WP_153477359.1;Name=WP_153477359.1;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213865.1;locus_tag=NIV78_RS21895;product=IS21 family transposase;protein_id=WP_153477359.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1037740 1038489 . + . ID=gene-NIV78_RS21900;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=NIV78_RS21900 NZ_CP100137.1 Protein Homology CDS 1037740 1038489 . + 0 ID=cds-WP_006400877.1-2;Parent=gene-NIV78_RS21900;Dbxref=Genbank:WP_006400877.1;Name=WP_006400877.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732736.1;locus_tag=NIV78_RS21900;product=IS21-like element ISBmu3 family helper ATPase IstB;protein_id=WP_006400877.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 1038505 1039342 . - . ID=gene-NIV78_RS21905;Name=NIV78_RS21905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS21905;pseudo=true NZ_CP100137.1 Protein Homology CDS 1038505 1039342 . - 0 ID=cds-NIV78_RS21905;Parent=gene-NIV78_RS21905;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611121.1;locus_tag=NIV78_RS21905;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 1040047 1040388 . - . ID=gene-NIV78_RS21910;Name=NIV78_RS21910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS21910;partial=true;pseudo=true;start_range=.,1040047 NZ_CP100137.1 Protein Homology CDS 1040047 1040388 . - 0 ID=cds-NIV78_RS21910;Parent=gene-NIV78_RS21910;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011000219.1;locus_tag=NIV78_RS21910;partial=true;product=transposase;pseudo=true;start_range=.,1040047;transl_table=11 NZ_CP100137.1 RefSeq gene 1040584 1043301 . - . ID=gene-NIV78_RS21915;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=NIV78_RS21915 NZ_CP100137.1 Protein Homology CDS 1040584 1043301 . - 0 ID=cds-WP_012733623.1;Parent=gene-NIV78_RS21915;Dbxref=Genbank:WP_012733623.1;Name=WP_012733623.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012428654.1;locus_tag=NIV78_RS21915;product=aconitate hydratase AcnA;protein_id=WP_012733623.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1043350 1044801 . - . ID=gene-NIV78_RS21920;Name=NIV78_RS21920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21920 NZ_CP100137.1 Protein Homology CDS 1043350 1044801 . - 0 ID=cds-WP_017923502.1;Parent=gene-NIV78_RS21920;Dbxref=Genbank:WP_017923502.1;Name=WP_017923502.1;Ontology_term=GO:0019679,GO:0047547,GO:0051537;gbkey=CDS;go_function=2-methylcitrate dehydratase activity|0047547||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001272709.1;locus_tag=NIV78_RS21920;product=bifunctional 2-methylcitrate dehydratase/aconitate hydratase;protein_id=WP_017923502.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1044872 1045393 . - . ID=gene-NIV78_RS21925;Name=NIV78_RS21925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21925 NZ_CP100137.1 Protein Homology CDS 1044872 1045393 . - 0 ID=cds-WP_012733625.1;Parent=gene-NIV78_RS21925;Dbxref=Genbank:WP_012733625.1;Name=WP_012733625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733625.1;locus_tag=NIV78_RS21925;product=hypothetical protein;protein_id=WP_012733625.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1045641 1046663 . - . ID=gene-NIV78_RS21930;Name=NIV78_RS21930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21930 NZ_CP100137.1 Protein Homology CDS 1045641 1046663 . - 0 ID=cds-WP_251107584.1;Parent=gene-NIV78_RS21930;Dbxref=Genbank:WP_251107584.1;Name=WP_251107584.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733626.1;locus_tag=NIV78_RS21930;product=aldolase/citrate lyase family protein;protein_id=WP_251107584.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1046837 1047820 . - . ID=gene-NIV78_RS21935;Name=NIV78_RS21935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21935 NZ_CP100137.1 Protein Homology CDS 1046837 1047820 . - 0 ID=cds-WP_012733627.1;Parent=gene-NIV78_RS21935;Dbxref=Genbank:WP_012733627.1;Name=WP_012733627.1;Ontology_term=GO:0006108,GO:0016615;gbkey=CDS;go_function=malate dehydrogenase activity|0016615||IEA;go_process=malate metabolic process|0006108||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006028603.1;locus_tag=NIV78_RS21935;product=malate dehydrogenase;protein_id=WP_012733627.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1048108 1048938 . + . ID=gene-NIV78_RS21940;Name=NIV78_RS21940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21940 NZ_CP100137.1 Protein Homology CDS 1048108 1048938 . + 0 ID=cds-WP_012733628.1;Parent=gene-NIV78_RS21940;Dbxref=Genbank:WP_012733628.1;Name=WP_012733628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196014.1;locus_tag=NIV78_RS21940;product=GntR family transcriptional regulator;protein_id=WP_012733628.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1049129 1049545 . + . ID=gene-NIV78_RS21945;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;locus_tag=NIV78_RS21945 NZ_CP100137.1 Protein Homology CDS 1049129 1049545 . + 0 ID=cds-WP_012733629.1;Parent=gene-NIV78_RS21945;Dbxref=Genbank:WP_012733629.1;Name=WP_012733629.1;Ontology_term=GO:0006099,GO:0000104,GO:0045282;gbkey=CDS;gene=sdhC;go_component=plasma membrane succinate dehydrogenase complex|0045282||IEA;go_function=succinate dehydrogenase activity|0000104||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009895818.1;locus_tag=NIV78_RS21945;product=succinate dehydrogenase%2C cytochrome b556 subunit;protein_id=WP_012733629.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1049550 1049918 . + . ID=gene-NIV78_RS21950;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;locus_tag=NIV78_RS21950 NZ_CP100137.1 Protein Homology CDS 1049550 1049918 . + 0 ID=cds-WP_012733630.1;Parent=gene-NIV78_RS21950;Dbxref=Genbank:WP_012733630.1;Name=WP_012733630.1;Ontology_term=GO:0006099,GO:0000104,GO:0045282;gbkey=CDS;gene=sdhD;go_component=plasma membrane succinate dehydrogenase complex|0045282||IEA;go_function=succinate dehydrogenase activity|0000104||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018439830.1;locus_tag=NIV78_RS21950;product=succinate dehydrogenase%2C hydrophobic membrane anchor protein;protein_id=WP_012733630.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1049923 1051698 . + . ID=gene-NIV78_RS21955;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=NIV78_RS21955 NZ_CP100137.1 Protein Homology CDS 1049923 1051698 . + 0 ID=cds-WP_012733631.1;Parent=gene-NIV78_RS21955;Dbxref=Genbank:WP_012733631.1;Name=WP_012733631.1;Ontology_term=GO:0006099,GO:0022900,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014193768.1;locus_tag=NIV78_RS21955;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_012733631.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1051720 1052421 . + . ID=gene-NIV78_RS21960;Name=NIV78_RS21960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21960 NZ_CP100137.1 Protein Homology CDS 1051720 1052421 . + 0 ID=cds-WP_012733632.1;Parent=gene-NIV78_RS21960;Dbxref=Genbank:WP_012733632.1;Name=WP_012733632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733632.1;locus_tag=NIV78_RS21960;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_012733632.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1052433 1052705 . + . ID=gene-NIV78_RS21965;Name=NIV78_RS21965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21965 NZ_CP100137.1 Protein Homology CDS 1052433 1052705 . + 0 ID=cds-WP_012733633.1;Parent=gene-NIV78_RS21965;Dbxref=Genbank:WP_012733633.1;Name=WP_012733633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733633.1;locus_tag=NIV78_RS21965;product=succinate dehydrogenase assembly factor 2;protein_id=WP_012733633.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1052759 1054063 . + . ID=gene-NIV78_RS21970;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=NIV78_RS21970 NZ_CP100137.1 Protein Homology CDS 1052759 1054063 . + 0 ID=cds-WP_012733634.1;Parent=gene-NIV78_RS21970;Dbxref=Genbank:WP_012733634.1;Name=WP_012733634.1;Ontology_term=GO:0006099,GO:0004108;gbkey=CDS;gene=gltA;go_function=citrate (Si)-synthase activity|0004108||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733634.1;locus_tag=NIV78_RS21970;product=citrate synthase;protein_id=WP_012733634.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1054219 1054608 . + . ID=gene-NIV78_RS21975;Name=NIV78_RS21975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21975 NZ_CP100137.1 Protein Homology CDS 1054219 1054608 . + 0 ID=cds-WP_012733635.1;Parent=gene-NIV78_RS21975;Dbxref=Genbank:WP_012733635.1;Name=WP_012733635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525181.1;locus_tag=NIV78_RS21975;product=VOC family protein;protein_id=WP_012733635.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1054718 1055098 . + . ID=gene-NIV78_RS21980;Name=NIV78_RS21980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21980 NZ_CP100137.1 GeneMarkS-2+ CDS 1054718 1055098 . + 0 ID=cds-WP_017432813.1;Parent=gene-NIV78_RS21980;Dbxref=Genbank:WP_017432813.1;Name=WP_017432813.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS21980;product=hypothetical protein;protein_id=WP_017432813.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1055291 1056100 . + . ID=gene-NIV78_RS21985;Name=NIV78_RS21985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21985 NZ_CP100137.1 Protein Homology CDS 1055291 1056100 . + 0 ID=cds-WP_012733636.1;Parent=gene-NIV78_RS21985;Dbxref=Genbank:WP_012733636.1;Name=WP_012733636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733636.1;locus_tag=NIV78_RS21985;product=AraC family transcriptional regulator;protein_id=WP_012733636.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1056176 1057273 . - . ID=gene-NIV78_RS21990;Name=NIV78_RS21990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21990 NZ_CP100137.1 Protein Homology CDS 1056176 1057273 . - 0 ID=cds-WP_257757986.1;Parent=gene-NIV78_RS21990;Dbxref=Genbank:WP_257757986.1;Name=WP_257757986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733637.1;locus_tag=NIV78_RS21990;product=low specificity L-threonine aldolase;protein_id=WP_257757986.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1057436 1058065 . + . ID=gene-NIV78_RS21995;Name=NIV78_RS21995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS21995 NZ_CP100137.1 Protein Homology CDS 1057436 1058065 . + 0 ID=cds-WP_251107583.1;Parent=gene-NIV78_RS21995;Dbxref=Genbank:WP_251107583.1;Name=WP_251107583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733638.1;locus_tag=NIV78_RS21995;product=alanyl-tRNA editing protein;protein_id=WP_251107583.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1058307 1059716 . + . ID=gene-NIV78_RS22000;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=NIV78_RS22000 NZ_CP100137.1 Protein Homology CDS 1058307 1059716 . + 0 ID=cds-WP_012733639.1;Parent=gene-NIV78_RS22000;Dbxref=Genbank:WP_012733639.1;Name=WP_012733639.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690586.1;locus_tag=NIV78_RS22000;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_012733639.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1059722 1059865 . + . ID=gene-NIV78_RS22005;Name=NIV78_RS22005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22005 NZ_CP100137.1 Protein Homology CDS 1059722 1059865 . + 0 ID=cds-WP_012733640.1;Parent=gene-NIV78_RS22005;Dbxref=Genbank:WP_012733640.1;Name=WP_012733640.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004551992.1;locus_tag=NIV78_RS22005;product=entericidin A/B family lipoprotein;protein_id=WP_012733640.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1059939 1060589 . + . ID=gene-NIV78_RS22010;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=NIV78_RS22010 NZ_CP100137.1 Protein Homology CDS 1059939 1060589 . + 0 ID=cds-WP_012733641.1;Parent=gene-NIV78_RS22010;Dbxref=Genbank:WP_012733641.1;Name=WP_012733641.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010099619.1;locus_tag=NIV78_RS22010;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_012733641.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1060676 1061743 . + . ID=gene-NIV78_RS22015;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=NIV78_RS22015 NZ_CP100137.1 Protein Homology CDS 1060676 1061743 . + 0 ID=cds-WP_012733642.1;Parent=gene-NIV78_RS22015;Dbxref=Genbank:WP_012733642.1;Name=WP_012733642.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725192.1;locus_tag=NIV78_RS22015;product=3-isopropylmalate dehydrogenase;protein_id=WP_012733642.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 1061918 1062059 . - . ID=gene-NIV78_RS22020;Name=NIV78_RS22020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS22020;partial=true;pseudo=true;start_range=.,1061918 NZ_CP100137.1 Protein Homology CDS 1061918 1062059 . - 0 ID=cds-NIV78_RS22020;Parent=gene-NIV78_RS22020;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525190.1;locus_tag=NIV78_RS22020;partial=true;product=3-isopropylmalate dehydrogenase;pseudo=true;start_range=.,1061918;transl_table=11 NZ_CP100137.1 RefSeq gene 1062058 1063179 . + . ID=gene-NIV78_RS22025;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=NIV78_RS22025 NZ_CP100137.1 Protein Homology CDS 1062058 1063179 . + 0 ID=cds-WP_012733643.1;Parent=gene-NIV78_RS22025;Dbxref=Genbank:WP_012733643.1;Name=WP_012733643.1;Ontology_term=GO:0009089,GO:0004073;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338485.1;locus_tag=NIV78_RS22025;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_012733643.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1063627 1064718 . - . ID=gene-NIV78_RS22030;Name=NIV78_RS22030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22030 NZ_CP100137.1 GeneMarkS-2+ CDS 1063627 1064718 . - 0 ID=cds-WP_232252168.1;Parent=gene-NIV78_RS22030;Dbxref=Genbank:WP_232252168.1;Name=WP_232252168.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS22030;product=hypothetical protein;protein_id=WP_232252168.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1064687 1066264 . + . ID=gene-NIV78_RS22035;Name=NIV78_RS22035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22035 NZ_CP100137.1 Protein Homology CDS 1064687 1066264 . + 0 ID=cds-WP_257757987.1;Parent=gene-NIV78_RS22035;Dbxref=Genbank:WP_257757987.1;Name=WP_257757987.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03504.1;locus_tag=NIV78_RS22035;product=hypothetical protein;protein_id=WP_257757987.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1066264 1067094 . + . ID=gene-NIV78_RS22040;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=NIV78_RS22040 NZ_CP100137.1 Protein Homology CDS 1066264 1067094 . + 0 ID=cds-WP_012733645.1;Parent=gene-NIV78_RS22040;Dbxref=Genbank:WP_012733645.1;Name=WP_012733645.1;Ontology_term=GO:0006400,GO:0009982;gbkey=CDS;gene=truA;go_function=pseudouridine synthase activity|0009982||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733645.1;locus_tag=NIV78_RS22040;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_012733645.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1067139 1067828 . + . ID=gene-NIV78_RS22045;Name=NIV78_RS22045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22045 NZ_CP100137.1 Protein Homology CDS 1067139 1067828 . + 0 ID=cds-WP_017923261.1;Parent=gene-NIV78_RS22045;Dbxref=Genbank:WP_017923261.1;Name=WP_017923261.1;Ontology_term=GO:0000162,GO:0004640;gbkey=CDS;go_function=phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733646.1;locus_tag=NIV78_RS22045;product=phosphoribosylanthranilate isomerase;protein_id=WP_017923261.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1067885 1069078 . + . ID=gene-NIV78_RS22050;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=NIV78_RS22050 NZ_CP100137.1 Protein Homology CDS 1067885 1069078 . + 0 ID=cds-WP_012733647.1;Parent=gene-NIV78_RS22050;Dbxref=Genbank:WP_012733647.1;Name=WP_012733647.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329990.1;locus_tag=NIV78_RS22050;product=tryptophan synthase subunit beta;protein_id=WP_012733647.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1069086 1069934 . + . ID=gene-NIV78_RS22055;Name=NIV78_RS22055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22055 NZ_CP100137.1 Protein Homology CDS 1069086 1069934 . + 0 ID=cds-WP_012733648.1;Parent=gene-NIV78_RS22055;Dbxref=Genbank:WP_012733648.1;Name=WP_012733648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525192.1;locus_tag=NIV78_RS22055;product=site-specific DNA-methyltransferase;protein_id=WP_012733648.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1069995 1070807 . + . ID=gene-NIV78_RS22060;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=NIV78_RS22060 NZ_CP100137.1 Protein Homology CDS 1069995 1070807 . + 0 ID=cds-WP_012733649.1;Parent=gene-NIV78_RS22060;Dbxref=Genbank:WP_012733649.1;Name=WP_012733649.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733649.1;locus_tag=NIV78_RS22060;product=tryptophan synthase subunit alpha;protein_id=WP_012733649.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1070903 1071775 . + . ID=gene-NIV78_RS22065;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=NIV78_RS22065 NZ_CP100137.1 Protein Homology CDS 1070903 1071775 . + 0 ID=cds-WP_012733650.1;Parent=gene-NIV78_RS22065;Dbxref=Genbank:WP_012733650.1;Name=WP_012733650.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012403665.1;locus_tag=NIV78_RS22065;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_012733650.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1071889 1073199 . + . ID=gene-NIV78_RS22070;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=NIV78_RS22070 NZ_CP100137.1 Protein Homology CDS 1071889 1073199 . + 0 ID=cds-WP_012733651.1;Parent=gene-NIV78_RS22070;Dbxref=Genbank:WP_012733651.1;Name=WP_012733651.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089192.1;locus_tag=NIV78_RS22070;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_012733651.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1073223 1074071 . + . ID=gene-NIV78_RS22075;Name=NIV78_RS22075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22075 NZ_CP100137.1 Protein Homology CDS 1073223 1074071 . + 0 ID=cds-WP_012733652.1;Parent=gene-NIV78_RS22075;Dbxref=Genbank:WP_012733652.1;Name=WP_012733652.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548088.1;locus_tag=NIV78_RS22075;product=SPOR domain-containing protein;protein_id=WP_012733652.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1074078 1074572 . + . ID=gene-NIV78_RS22080;Name=NIV78_RS22080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22080 NZ_CP100137.1 Protein Homology CDS 1074078 1074572 . + 0 ID=cds-WP_017425015.1;Parent=gene-NIV78_RS22080;Dbxref=Genbank:WP_017425015.1;Name=WP_017425015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188369.1;locus_tag=NIV78_RS22080;product=CvpA family protein;protein_id=WP_017425015.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1074619 1076151 . + . ID=gene-NIV78_RS22085;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=NIV78_RS22085 NZ_CP100137.1 Protein Homology CDS 1074619 1076151 . + 0 ID=cds-WP_017425014.1;Parent=gene-NIV78_RS22085;Dbxref=Genbank:WP_017425014.1;Name=WP_017425014.1;Ontology_term=GO:0009152,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004544727.1;locus_tag=NIV78_RS22085;product=amidophosphoribosyltransferase;protein_id=WP_017425014.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1076398 1077588 . + . ID=gene-NIV78_RS22090;Name=NIV78_RS22090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22090 NZ_CP100137.1 Protein Homology CDS 1076398 1077588 . + 0 ID=cds-WP_012733655.1;Parent=gene-NIV78_RS22090;Dbxref=Genbank:WP_012733655.1;Name=WP_012733655.1;Ontology_term=GO:0019346,GO:0071268,GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA,homocysteine biosynthetic process|0071268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694679.1;locus_tag=NIV78_RS22090;product=O-succinylhomoserine sulfhydrylase;protein_id=WP_012733655.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1077885 1078928 . - . ID=gene-NIV78_RS22095;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=NIV78_RS22095 NZ_CP100137.1 Protein Homology CDS 1077885 1078928 . - 0 ID=cds-WP_012733656.1;Parent=gene-NIV78_RS22095;Dbxref=Genbank:WP_012733656.1;Name=WP_012733656.1;Ontology_term=GO:0000271,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733656.1;locus_tag=NIV78_RS22095;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_012733656.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1078925 1080007 . - . ID=gene-NIV78_RS22100;Name=NIV78_RS22100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22100 NZ_CP100137.1 Protein Homology CDS 1078925 1080007 . - 0 ID=cds-WP_017424390.1;Parent=gene-NIV78_RS22100;Dbxref=Genbank:WP_017424390.1;Name=WP_017424390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424390.1;locus_tag=NIV78_RS22100;product=acyltransferase;protein_id=WP_017424390.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1080574 1082751 . + . ID=gene-NIV78_RS22105;Name=NIV78_RS22105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22105 NZ_CP100137.1 Protein Homology CDS 1080574 1082751 . + 0 ID=cds-WP_198513146.1;Parent=gene-NIV78_RS22105;Dbxref=Genbank:WP_198513146.1;Name=WP_198513146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733658.1;locus_tag=NIV78_RS22105;product=hypothetical protein;protein_id=WP_198513146.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1082800 1084266 . + . ID=gene-NIV78_RS22110;Name=NIV78_RS22110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22110 NZ_CP100137.1 Protein Homology CDS 1082800 1084266 . + 0 ID=cds-WP_012733659.1;Parent=gene-NIV78_RS22110;Dbxref=Genbank:WP_012733659.1;Name=WP_012733659.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006028637.1;locus_tag=NIV78_RS22110;product=oligosaccharide flippase family protein;protein_id=WP_012733659.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1084263 1086683 . + . ID=gene-NIV78_RS22115;Name=NIV78_RS22115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22115 NZ_CP100137.1 Protein Homology CDS 1084263 1086683 . + 0 ID=cds-WP_017923128.1;Parent=gene-NIV78_RS22115;Dbxref=Genbank:WP_017923128.1;Name=WP_017923128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733660.1;locus_tag=NIV78_RS22115;product=glycosyltransferase;protein_id=WP_017923128.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1087049 1088215 . - . ID=gene-NIV78_RS22120;Name=NIV78_RS22120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22120 NZ_CP100137.1 Protein Homology CDS 1087049 1088215 . - 0 ID=cds-WP_017424765.1;Parent=gene-NIV78_RS22120;Dbxref=Genbank:WP_017424765.1;Name=WP_017424765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424765.1;locus_tag=NIV78_RS22120;product=acyltransferase;protein_id=WP_017424765.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1088292 1088603 . + . ID=gene-NIV78_RS22125;Name=NIV78_RS22125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22125 NZ_CP100137.1 GeneMarkS-2+ CDS 1088292 1088603 . + 0 ID=cds-WP_124837426.1;Parent=gene-NIV78_RS22125;Dbxref=Genbank:WP_124837426.1;Name=WP_124837426.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS22125;product=hypothetical protein;protein_id=WP_124837426.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1088689 1089576 . + . ID=gene-NIV78_RS22130;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=NIV78_RS22130 NZ_CP100137.1 Protein Homology CDS 1088689 1089576 . + 0 ID=cds-WP_012733663.1;Parent=gene-NIV78_RS22130;Dbxref=Genbank:WP_012733663.1;Name=WP_012733663.1;Ontology_term=GO:0009225,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881778.1;locus_tag=NIV78_RS22130;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_012733663.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1090080 1090523 . + . ID=gene-NIV78_RS22135;Name=NIV78_RS22135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22135 NZ_CP100137.1 Protein Homology CDS 1090080 1090523 . + 0 ID=cds-WP_012733664.1;Parent=gene-NIV78_RS22135;Dbxref=Genbank:WP_012733664.1;Name=WP_012733664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011400993.1;locus_tag=NIV78_RS22135;product=HU family DNA-binding protein;protein_id=WP_012733664.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1090754 1091914 . - . ID=gene-NIV78_RS22140;Name=NIV78_RS22140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22140 NZ_CP100137.1 Protein Homology CDS 1090754 1091914 . - 0 ID=cds-WP_012733665.1;Parent=gene-NIV78_RS22140;Dbxref=Genbank:WP_012733665.1;Name=WP_012733665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603832.1;locus_tag=NIV78_RS22140;product=porin;protein_id=WP_012733665.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1092285 1093190 . - . ID=gene-NIV78_RS22145;Name=NIV78_RS22145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22145 NZ_CP100137.1 Protein Homology CDS 1092285 1093190 . - 0 ID=cds-WP_012733666.1;Parent=gene-NIV78_RS22145;Dbxref=Genbank:WP_012733666.1;Name=WP_012733666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733666.1;locus_tag=NIV78_RS22145;product=YihY/virulence factor BrkB family protein;protein_id=WP_012733666.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1093553 1094578 . + . ID=gene-NIV78_RS22150;Name=NIV78_RS22150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22150 NZ_CP100137.1 Protein Homology CDS 1093553 1094578 . + 0 ID=cds-WP_012733667.1;Parent=gene-NIV78_RS22150;Dbxref=Genbank:WP_012733667.1;Name=WP_012733667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690556.1;locus_tag=NIV78_RS22150;product=succinylglutamate desuccinylase/aspartoacylase family protein;protein_id=WP_012733667.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1094852 1097920 . + . ID=gene-NIV78_RS22155;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=NIV78_RS22155 NZ_CP100137.1 Protein Homology CDS 1094852 1097920 . + 0 ID=cds-WP_157384158.1;Parent=gene-NIV78_RS22155;Dbxref=Genbank:WP_157384158.1;Name=WP_157384158.1;Ontology_term=GO:0015942,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004528945.1;locus_tag=NIV78_RS22155;product=formate dehydrogenase-N subunit alpha;protein_id=WP_157384158.1;transl_except=(pos:1095440..1095442%2Caa:Sec);transl_table=11 NZ_CP100137.1 RefSeq gene 1097933 1098847 . + . ID=gene-NIV78_RS22160;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=NIV78_RS22160 NZ_CP100137.1 Protein Homology CDS 1097933 1098847 . + 0 ID=cds-WP_012733670.1;Parent=gene-NIV78_RS22160;Dbxref=Genbank:WP_012733670.1;Name=WP_012733670.1;Ontology_term=GO:0045333,GO:0008863;gbkey=CDS;gene=fdxH;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=cellular respiration|0045333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019256332.1;locus_tag=NIV78_RS22160;product=formate dehydrogenase subunit beta;protein_id=WP_012733670.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1098844 1099488 . + . ID=gene-NIV78_RS22165;Name=NIV78_RS22165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22165 NZ_CP100137.1 Protein Homology CDS 1098844 1099488 . + 0 ID=cds-WP_012733671.1;Parent=gene-NIV78_RS22165;Dbxref=Genbank:WP_012733671.1;Name=WP_012733671.1;Ontology_term=GO:0009061,GO:0008863,GO:0009055,GO:0009326;gbkey=CDS;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733671.1;locus_tag=NIV78_RS22165;product=formate dehydrogenase subunit gamma;protein_id=WP_012733671.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1099854 1100789 . + . ID=gene-NIV78_RS22170;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=NIV78_RS22170 NZ_CP100137.1 Protein Homology CDS 1099854 1100789 . + 0 ID=cds-WP_012733672.1;Parent=gene-NIV78_RS22170;Dbxref=Genbank:WP_012733672.1;Name=WP_012733672.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690551.1;locus_tag=NIV78_RS22170;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_012733672.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1100803 1102266 . + . ID=gene-NIV78_RS22175;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=NIV78_RS22175 NZ_CP100137.1 Protein Homology CDS 1100803 1102266 . + 0 ID=cds-WP_251107580.1;Parent=gene-NIV78_RS22175;Dbxref=Genbank:WP_251107580.1;Name=WP_251107580.1;Ontology_term=GO:0016260,GO:0004125;gbkey=CDS;gene=selA;go_function=L-seryl-tRNASec selenium transferase activity|0004125||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733673.1;locus_tag=NIV78_RS22175;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_251107580.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1102263 1104173 . + . ID=gene-NIV78_RS22180;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=NIV78_RS22180 NZ_CP100137.1 Protein Homology CDS 1102263 1104173 . + 0 ID=cds-WP_012733674.1;Parent=gene-NIV78_RS22180;Dbxref=Genbank:WP_012733674.1;Name=WP_012733674.1;Ontology_term=GO:0001514,GO:0006414,GO:0003746;gbkey=CDS;gene=selB;go_function=translation elongation factor activity|0003746||IEA;go_process=selenocysteine incorporation|0001514||IEA,translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004549253.1;locus_tag=NIV78_RS22180;product=selenocysteine-specific translation elongation factor;protein_id=WP_012733674.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1104202 1104297 . + . ID=gene-NIV78_RS22185;Name=NIV78_RS22185;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS22185 NZ_CP100137.1 tRNAscan-SE tRNA 1104202 1104297 . + . ID=rna-NIV78_RS22185;Parent=gene-NIV78_RS22185;anticodon=(pos:1104236..1104238);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS22185;product=tRNA-Sec NZ_CP100137.1 tRNAscan-SE exon 1104202 1104297 . + . ID=exon-NIV78_RS22185-1;Parent=rna-NIV78_RS22185;anticodon=(pos:1104236..1104238);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS22185;product=tRNA-Sec NZ_CP100137.1 RefSeq pseudogene 1104311 1104633 . - . ID=gene-NIV78_RS22190;Name=NIV78_RS22190;end_range=1104633,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS22190;partial=true;pseudo=true;start_range=.,1104311 NZ_CP100137.1 Protein Homology CDS 1104311 1104633 . - 0 ID=cds-NIV78_RS22190;Parent=gene-NIV78_RS22190;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1104633,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611183.1;locus_tag=NIV78_RS22190;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,1104311;transl_table=11 NZ_CP100137.1 RefSeq gene 1104938 1105936 . - . ID=gene-NIV78_RS22195;Name=NIV78_RS22195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22195 NZ_CP100137.1 Protein Homology CDS 1104938 1105936 . - 0 ID=cds-WP_257757995.1;Parent=gene-NIV78_RS22195;Dbxref=Genbank:WP_257757995.1;Name=WP_257757995.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423242.1;locus_tag=NIV78_RS22195;product=fimbrial protein;protein_id=WP_257757995.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1106194 1108743 . - . ID=gene-NIV78_RS22200;Name=NIV78_RS22200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22200 NZ_CP100137.1 Protein Homology CDS 1106194 1108743 . - 0 ID=cds-WP_148271057.1;Parent=gene-NIV78_RS22200;Dbxref=Genbank:WP_148271057.1;Name=WP_148271057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690662.1;locus_tag=NIV78_RS22200;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_148271057.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1108835 1109695 . - . ID=gene-NIV78_RS22205;Name=NIV78_RS22205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22205 NZ_CP100137.1 Protein Homology CDS 1108835 1109695 . - 0 ID=cds-WP_245163835.1;Parent=gene-NIV78_RS22205;Dbxref=Genbank:WP_245163835.1;Name=WP_245163835.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690663.1;locus_tag=NIV78_RS22205;product=fimbria/pilus periplasmic chaperone;protein_id=WP_245163835.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1109688 1110248 . - . ID=gene-NIV78_RS22210;Name=NIV78_RS22210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22210 NZ_CP100137.1 Protein Homology CDS 1109688 1110248 . - 0 ID=cds-WP_124837867.1;Parent=gene-NIV78_RS22210;Dbxref=Genbank:WP_124837867.1;Name=WP_124837867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690664.1;locus_tag=NIV78_RS22210;product=type 1 fimbrial protein;protein_id=WP_124837867.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 1110653 1110814 . - . ID=gene-NIV78_RS22215;Name=NIV78_RS22215;end_range=1110814,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS22215;partial=true;pseudo=true NZ_CP100137.1 Protein Homology CDS 1110653 1110814 . - 0 ID=cds-NIV78_RS22215;Parent=gene-NIV78_RS22215;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1110814,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015042013.1;locus_tag=NIV78_RS22215;partial=true;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_CP100137.1 RefSeq gene 1110949 1111766 . - . ID=gene-NIV78_RS22220;Name=NIV78_RS22220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22220 NZ_CP100137.1 Protein Homology CDS 1111418 1111766 . - 0 ID=cds-WP_085962419.1-2;Parent=gene-NIV78_RS22220;Dbxref=Genbank:WP_085962419.1;Name=WP_085962419.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS22220;product=IS5 family transposase;protein_id=WP_085962419.1;transl_table=11 NZ_CP100137.1 Protein Homology CDS 1110949 1111418 . - 2 ID=cds-WP_085962419.1-2;Parent=gene-NIV78_RS22220;Dbxref=Genbank:WP_085962419.1;Name=WP_085962419.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS22220;product=IS5 family transposase;protein_id=WP_085962419.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 1111996 1112157 . + . ID=gene-NIV78_RS22225;Name=NIV78_RS22225;end_range=1112157,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS22225;partial=true;pseudo=true;start_range=.,1111996 NZ_CP100137.1 Protein Homology CDS 1111996 1112157 . + 0 ID=cds-NIV78_RS22225;Parent=gene-NIV78_RS22225;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;end_range=1112157,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611469.1;locus_tag=NIV78_RS22225;partial=true;product=integrase core domain-containing protein;pseudo=true;start_range=.,1111996;transl_table=11 NZ_CP100137.1 RefSeq gene 1112615 1113175 . + . ID=gene-NIV78_RS22230;Name=NIV78_RS22230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22230 NZ_CP100137.1 Protein Homology CDS 1112615 1113175 . + 0 ID=cds-WP_124837867.1-2;Parent=gene-NIV78_RS22230;Dbxref=Genbank:WP_124837867.1;Name=WP_124837867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690664.1;locus_tag=NIV78_RS22230;product=type 1 fimbrial protein;protein_id=WP_124837867.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 1113285 1113551 . + . ID=gene-NIV78_RS22235;Name=NIV78_RS22235;end_range=1113551,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS22235;partial=true;pseudo=true NZ_CP100137.1 Protein Homology CDS 1113285 1113551 . + 0 ID=cds-NIV78_RS22235;Parent=gene-NIV78_RS22235;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0071555,GO:0030288;end_range=1113551,.;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690663.1;locus_tag=NIV78_RS22235;partial=true;product=fimbria/pilus periplasmic chaperone;pseudo=true;transl_table=11 NZ_CP100137.1 RefSeq gene 1113584 1114821 . - . ID=gene-NIV78_RS22240;Name=NIV78_RS22240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22240 NZ_CP100137.1 Protein Homology CDS 1114530 1114821 . - 0 ID=cds-WP_088499505.1-3;Parent=gene-NIV78_RS22240;Dbxref=Genbank:WP_088499505.1;Name=WP_088499505.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558218.1;locus_tag=NIV78_RS22240;product=IS3 family transposase;protein_id=WP_088499505.1;transl_table=11 NZ_CP100137.1 Protein Homology CDS 1113584 1114530 . - 2 ID=cds-WP_088499505.1-3;Parent=gene-NIV78_RS22240;Dbxref=Genbank:WP_088499505.1;Name=WP_088499505.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558218.1;locus_tag=NIV78_RS22240;product=IS3 family transposase;protein_id=WP_088499505.1;transl_table=11 NZ_CP100137.1 cmsearch sequence_feature 1114424 1114540 . - . ID=id-NIV78_RS22240;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS22240 NZ_CP100137.1 RefSeq gene 1115057 1115338 . + . ID=gene-NIV78_RS22245;Name=NIV78_RS22245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22245 NZ_CP100137.1 Protein Homology CDS 1115057 1115338 . + 0 ID=cds-WP_017423246.1;Parent=gene-NIV78_RS22245;Dbxref=Genbank:WP_017423246.1;Name=WP_017423246.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020265.2;locus_tag=NIV78_RS22245;product=DUF1778 domain-containing protein;protein_id=WP_017423246.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1115335 1115832 . + . ID=gene-NIV78_RS22250;Name=NIV78_RS22250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22250 NZ_CP100137.1 Protein Homology CDS 1115335 1115832 . + 0 ID=cds-WP_017423245.1;Parent=gene-NIV78_RS22250;Dbxref=Genbank:WP_017423245.1;Name=WP_017423245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423245.1;locus_tag=NIV78_RS22250;product=GNAT family N-acetyltransferase;protein_id=WP_017423245.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1115913 1116410 . + . ID=gene-NIV78_RS22255;Name=NIV78_RS22255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22255 NZ_CP100137.1 Protein Homology CDS 1115913 1116410 . + 0 ID=cds-WP_251107809.1;Parent=gene-NIV78_RS22255;Dbxref=Genbank:WP_251107809.1;Name=WP_251107809.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016255.2;locus_tag=NIV78_RS22255;product=ProQ/FINO family protein;protein_id=WP_251107809.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 1116826 1117428 . + . ID=gene-NIV78_RS22260;Name=NIV78_RS22260;end_range=1117428,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS22260;partial=true;pseudo=true;start_range=.,1116826 NZ_CP100137.1 Protein Homology CDS 1116826 1117428 . + 0 ID=cds-NIV78_RS22260;Parent=gene-NIV78_RS22260;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1117428,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212597.1;locus_tag=NIV78_RS22260;partial=true;product=RHS domain-containing protein;pseudo=true;start_range=.,1116826;transl_table=11 NZ_CP100137.1 RefSeq gene 1117567 1117809 . + . ID=gene-NIV78_RS22265;Name=NIV78_RS22265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22265 NZ_CP100137.1 GeneMarkS-2+ CDS 1117567 1117809 . + 0 ID=cds-WP_257757996.1;Parent=gene-NIV78_RS22265;Dbxref=Genbank:WP_257757996.1;Name=WP_257757996.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS22265;product=TIGR02269 family lipoprotein;protein_id=WP_257757996.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1117826 1118110 . + . ID=gene-NIV78_RS22270;Name=NIV78_RS22270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22270 NZ_CP100137.1 GeneMarkS-2+ CDS 1117826 1118110 . + 0 ID=cds-WP_153478924.1;Parent=gene-NIV78_RS22270;Dbxref=Genbank:WP_153478924.1;Name=WP_153478924.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS22270;product=hypothetical protein;protein_id=WP_153478924.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 1118233 1118778 . + . ID=gene-NIV78_RS22275;Name=NIV78_RS22275;end_range=1118778,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS22275;partial=true;pseudo=true;start_range=.,1118233 NZ_CP100137.1 Protein Homology CDS 1118233 1118778 . + 0 ID=cds-NIV78_RS22275;Parent=gene-NIV78_RS22275;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;end_range=1118778,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612095.1;locus_tag=NIV78_RS22275;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1118233;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 1118850 1118945 . + . ID=gene-NIV78_RS22280;Name=NIV78_RS22280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS22280;partial=true;pseudo=true;start_range=.,1118850 NZ_CP100137.1 Protein Homology CDS 1118850 1118945 . + 0 ID=cds-NIV78_RS22280;Parent=gene-NIV78_RS22280;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612348.1;locus_tag=NIV78_RS22280;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,1118850;transl_table=11 NZ_CP100137.1 RefSeq gene 1119031 1120380 . - . ID=gene-NIV78_RS22285;Name=NIV78_RS22285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22285 NZ_CP100137.1 Protein Homology CDS 1119031 1120380 . - 0 ID=cds-WP_017424540.1;Parent=gene-NIV78_RS22285;Dbxref=Genbank:WP_017424540.1;Name=WP_017424540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877376.1;locus_tag=NIV78_RS22285;product=allantoin permease;protein_id=WP_017424540.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1120602 1121597 . - . ID=gene-NIV78_RS22290;Name=NIV78_RS22290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22290 NZ_CP100137.1 Protein Homology CDS 1120602 1121597 . - 0 ID=cds-WP_015877375.1;Parent=gene-NIV78_RS22290;Dbxref=Genbank:WP_015877375.1;Name=WP_015877375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483468.1;locus_tag=NIV78_RS22290;product=biotin-dependent carboxyltransferase family protein;protein_id=WP_015877375.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1121587 1122462 . - . ID=gene-NIV78_RS22295;Name=NIV78_RS22295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22295 NZ_CP100137.1 Protein Homology CDS 1121587 1122462 . - 0 ID=cds-WP_015877374.1;Parent=gene-NIV78_RS22295;Dbxref=Genbank:WP_015877374.1;Name=WP_015877374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010111384.1;locus_tag=NIV78_RS22295;product=allophanate hydrolase subunit 1;protein_id=WP_015877374.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1122459 1123916 . - . ID=gene-NIV78_RS22300;Name=NIV78_RS22300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22300 NZ_CP100137.1 Protein Homology CDS 1122459 1123916 . - 0 ID=cds-WP_017923220.1;Parent=gene-NIV78_RS22300;Dbxref=Genbank:WP_017923220.1;Name=WP_017923220.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329328.1;locus_tag=NIV78_RS22300;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_017923220.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1123921 1124163 . - . ID=gene-NIV78_RS22305;Name=NIV78_RS22305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22305 NZ_CP100137.1 Protein Homology CDS 1123921 1124163 . - 0 ID=cds-WP_015877372.1;Parent=gene-NIV78_RS22305;Dbxref=Genbank:WP_015877372.1;Name=WP_015877372.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877372.1;locus_tag=NIV78_RS22305;product=acetyl-CoA carboxylase;protein_id=WP_015877372.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1124186 1124968 . - . ID=gene-NIV78_RS22310;Name=NIV78_RS22310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22310 NZ_CP100137.1 Protein Homology CDS 1124186 1124968 . - 0 ID=cds-WP_015877371.1;Parent=gene-NIV78_RS22310;Dbxref=Genbank:WP_015877371.1;Name=WP_015877371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877371.1;locus_tag=NIV78_RS22310;product=5-oxoprolinase subunit PxpA;protein_id=WP_015877371.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1125227 1126144 . + . ID=gene-NIV78_RS22315;Name=NIV78_RS22315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22315 NZ_CP100137.1 Protein Homology CDS 1125227 1126144 . + 0 ID=cds-WP_015877370.1;Parent=gene-NIV78_RS22315;Dbxref=Genbank:WP_015877370.1;Name=WP_015877370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877370.1;locus_tag=NIV78_RS22315;product=LysR family transcriptional regulator;protein_id=WP_015877370.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1126205 1126453 . + . ID=gene-NIV78_RS22320;Name=NIV78_RS22320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22320 NZ_CP100137.1 Protein Homology CDS 1126205 1126453 . + 0 ID=cds-WP_017923221.1;Parent=gene-NIV78_RS22320;Dbxref=Genbank:WP_017923221.1;Name=WP_017923221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020379757.1;locus_tag=NIV78_RS22320;product=hypothetical protein;protein_id=WP_017923221.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1127039 1128193 . + . ID=gene-NIV78_RS22325;Name=NIV78_RS22325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22325 NZ_CP100137.1 Protein Homology CDS 1127039 1128193 . + 0 ID=cds-WP_169511522.1;Parent=gene-NIV78_RS22325;Dbxref=Genbank:WP_169511522.1;Name=WP_169511522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198207.1;locus_tag=NIV78_RS22325;product=flagellin;protein_id=WP_169511522.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1128444 1129261 . - . ID=gene-NIV78_RS22330;Name=NIV78_RS22330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22330 NZ_CP100137.1 Protein Homology CDS 1128913 1129261 . - 0 ID=cds-WP_085962419.1-3;Parent=gene-NIV78_RS22330;Dbxref=Genbank:WP_085962419.1;Name=WP_085962419.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS22330;product=IS5 family transposase;protein_id=WP_085962419.1;transl_table=11 NZ_CP100137.1 Protein Homology CDS 1128444 1128913 . - 2 ID=cds-WP_085962419.1-3;Parent=gene-NIV78_RS22330;Dbxref=Genbank:WP_085962419.1;Name=WP_085962419.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS22330;product=IS5 family transposase;protein_id=WP_085962419.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 1129886 1130382 . - . ID=gene-NIV78_RS22335;Name=NIV78_RS22335;end_range=1130382,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS22335;partial=true;pseudo=true NZ_CP100137.1 Protein Homology CDS 1129886 1130382 . - 0 ID=cds-NIV78_RS22335;Parent=gene-NIV78_RS22335;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0007165,GO:0016020;end_range=1130382,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732724.1;locus_tag=NIV78_RS22335;partial=true;product=methyl-accepting chemotaxis protein;pseudo=true;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 1130690 1130797 . + . ID=gene-NIV78_RS22340;Name=NIV78_RS22340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS22340;partial=true;pseudo=true;start_range=.,1130690 NZ_CP100137.1 Protein Homology CDS 1130690 1130797 . + 0 ID=cds-NIV78_RS22340;Parent=gene-NIV78_RS22340;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611183.1;locus_tag=NIV78_RS22340;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,1130690;transl_table=11 NZ_CP100137.1 RefSeq gene 1130930 1133044 . - . ID=gene-NIV78_RS22345;Name=NIV78_RS22345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22345 NZ_CP100137.1 Protein Homology CDS 1130930 1133044 . - 0 ID=cds-WP_017924055.1;Parent=gene-NIV78_RS22345;Dbxref=Genbank:WP_017924055.1;Name=WP_017924055.1;Ontology_term=GO:0006807,GO:0009435,GO:0003952,GO:0004359,GO:0005524;gbkey=CDS;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,ATP binding|0005524||IEA;go_process=nitrogen compound metabolic process|0006807||IEA,NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877366.1;locus_tag=NIV78_RS22345;product=NAD(+) synthase;protein_id=WP_017924055.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1133041 1135533 . - . ID=gene-NIV78_RS22350;Name=NIV78_RS22350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22350 NZ_CP100137.1 Protein Homology CDS 1133041 1135533 . - 0 ID=cds-WP_015877365.1;Parent=gene-NIV78_RS22350;Dbxref=Genbank:WP_015877365.1;Name=WP_015877365.1;Ontology_term=GO:0017000,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: protein motif:HMM:NF013927.2;locus_tag=NIV78_RS22350;product=penicillin acylase family protein;protein_id=WP_015877365.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1135563 1136861 . - . ID=gene-NIV78_RS22355;Name=NIV78_RS22355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22355 NZ_CP100137.1 Protein Homology CDS 1135563 1136861 . - 0 ID=cds-WP_017424821.1;Parent=gene-NIV78_RS22355;Dbxref=Genbank:WP_017424821.1;Name=WP_017424821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424821.1;locus_tag=NIV78_RS22355;product=hypothetical protein;protein_id=WP_017424821.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1136935 1138104 . - . ID=gene-NIV78_RS22360;Name=NIV78_RS22360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22360 NZ_CP100137.1 Protein Homology CDS 1136935 1138104 . - 0 ID=cds-WP_251107812.1;Parent=gene-NIV78_RS22360;Dbxref=Genbank:WP_251107812.1;Name=WP_251107812.1;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877363.1;locus_tag=NIV78_RS22360;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_251107812.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1138166 1141324 . - . ID=gene-NIV78_RS22365;Name=NIV78_RS22365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22365 NZ_CP100137.1 Protein Homology CDS 1138166 1141324 . - 0 ID=cds-WP_153478909.1;Parent=gene-NIV78_RS22365;Dbxref=Genbank:WP_153478909.1;Name=WP_153478909.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012901.2;locus_tag=NIV78_RS22365;product=acyltransferase domain-containing protein;protein_id=WP_153478909.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1141314 1148129 . - . ID=gene-NIV78_RS22370;Name=NIV78_RS22370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22370 NZ_CP100137.1 Protein Homology CDS 1141314 1148129 . - 0 ID=cds-WP_251119103.1;Parent=gene-NIV78_RS22370;Dbxref=Genbank:WP_251119103.1;Name=WP_251119103.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012873.2;locus_tag=NIV78_RS22370;product=amino acid adenylation domain-containing protein;protein_id=WP_251119103.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1148126 1153438 . - . ID=gene-NIV78_RS22375;Name=NIV78_RS22375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22375 NZ_CP100137.1 Protein Homology CDS 1148126 1153438 . - 0 ID=cds-WP_159372665.1;Parent=gene-NIV78_RS22375;Dbxref=Genbank:WP_159372665.1;Name=WP_159372665.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012873.2;locus_tag=NIV78_RS22375;product=non-ribosomal peptide synthetase;protein_id=WP_159372665.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1153582 1154817 . - . ID=gene-NIV78_RS22380;Name=NIV78_RS22380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22380 NZ_CP100137.1 Protein Homology CDS 1153582 1154817 . - 0 ID=cds-WP_015877359.1;Parent=gene-NIV78_RS22380;Dbxref=Genbank:WP_015877359.1;Name=WP_015877359.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877359.1;locus_tag=NIV78_RS22380;product=MFS transporter;protein_id=WP_015877359.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1154840 1156837 . - . ID=gene-NIV78_RS22385;Name=NIV78_RS22385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22385 NZ_CP100137.1 GeneMarkS-2+ CDS 1154840 1156837 . - 0 ID=cds-WP_251107814.1;Parent=gene-NIV78_RS22385;Dbxref=Genbank:WP_251107814.1;Name=WP_251107814.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS22385;product=hypothetical protein;protein_id=WP_251107814.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1156940 1158703 . - . ID=gene-NIV78_RS22390;Name=NIV78_RS22390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22390 NZ_CP100137.1 Protein Homology CDS 1156940 1158703 . - 0 ID=cds-WP_017423366.1;Parent=gene-NIV78_RS22390;Dbxref=Genbank:WP_017423366.1;Name=WP_017423366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877358.1;locus_tag=NIV78_RS22390;product=nodulation protein;protein_id=WP_017423366.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1158739 1159152 . - . ID=gene-NIV78_RS22395;Name=NIV78_RS22395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22395 NZ_CP100137.1 Protein Homology CDS 1158739 1159152 . - 0 ID=cds-WP_015877357.1;Parent=gene-NIV78_RS22395;Dbxref=Genbank:WP_015877357.1;Name=WP_015877357.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423365.1;locus_tag=NIV78_RS22395;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_015877357.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1159197 1159556 . - . ID=gene-NIV78_RS22400;Name=NIV78_RS22400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22400 NZ_CP100137.1 Protein Homology CDS 1159197 1159556 . - 0 ID=cds-WP_017423364.1;Parent=gene-NIV78_RS22400;Dbxref=Genbank:WP_017423364.1;Name=WP_017423364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423364.1;locus_tag=NIV78_RS22400;product=hypothetical protein;protein_id=WP_017423364.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1160216 1160680 . - . ID=gene-NIV78_RS22405;Name=NIV78_RS22405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22405 NZ_CP100137.1 Protein Homology CDS 1160216 1160680 . - 0 ID=cds-WP_015877356.1;Parent=gene-NIV78_RS22405;Dbxref=Genbank:WP_015877356.1;Name=WP_015877356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877356.1;locus_tag=NIV78_RS22405;product=GNAT family N-acetyltransferase;protein_id=WP_015877356.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 1161170 1162363 . + . ID=gene-NIV78_RS22410;Name=NIV78_RS22410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS22410;pseudo=true NZ_CP100137.1 Protein Homology CDS 1161170 1162363 . + 0 ID=cds-NIV78_RS22410;Parent=gene-NIV78_RS22410;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015003032.1;locus_tag=NIV78_RS22410;product=IS701 family transposase;pseudo=true;transl_table=11 NZ_CP100137.1 RefSeq gene 1162338 1163155 . - . ID=gene-NIV78_RS22415;Name=NIV78_RS22415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22415 NZ_CP100137.1 Protein Homology CDS 1162807 1163155 . - 0 ID=cds-WP_085962362.1-5;Parent=gene-NIV78_RS22415;Dbxref=Genbank:WP_085962362.1;Name=WP_085962362.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS22415;product=IS5 family transposase;protein_id=WP_085962362.1;transl_table=11 NZ_CP100137.1 Protein Homology CDS 1162338 1162807 . - 2 ID=cds-WP_085962362.1-5;Parent=gene-NIV78_RS22415;Dbxref=Genbank:WP_085962362.1;Name=WP_085962362.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS22415;product=IS5 family transposase;protein_id=WP_085962362.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1163430 1164235 . - . ID=gene-NIV78_RS22420;Name=NIV78_RS22420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22420 NZ_CP100137.1 Protein Homology CDS 1163908 1164235 . - 0 ID=cds-WP_257757998.1;Parent=gene-NIV78_RS22420;Dbxref=Genbank:WP_257757998.1;Name=WP_257757998.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611183.1;locus_tag=NIV78_RS22420;product=IS5 family transposase;protein_id=WP_257757998.1;transl_table=11 NZ_CP100137.1 Protein Homology CDS 1163430 1163908 . - 2 ID=cds-WP_257757998.1;Parent=gene-NIV78_RS22420;Dbxref=Genbank:WP_257757998.1;Name=WP_257757998.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611183.1;locus_tag=NIV78_RS22420;product=IS5 family transposase;protein_id=WP_257757998.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1165077 1165790 . + . ID=gene-NIV78_RS22425;Name=NIV78_RS22425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22425 NZ_CP100137.1 GeneMarkS-2+ CDS 1165077 1165790 . + 0 ID=cds-WP_124837627.1;Parent=gene-NIV78_RS22425;Dbxref=Genbank:WP_124837627.1;Name=WP_124837627.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS22425;product=hypothetical protein;protein_id=WP_124837627.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1166226 1167251 . + . ID=gene-NIV78_RS22430;Name=NIV78_RS22430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22430 NZ_CP100137.1 Protein Homology CDS 1166226 1167251 . + 0 ID=cds-WP_015877355.1;Parent=gene-NIV78_RS22430;Dbxref=Genbank:WP_015877355.1;Name=WP_015877355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877355.1;locus_tag=NIV78_RS22430;product=LysR family transcriptional regulator;protein_id=WP_015877355.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1167262 1167561 . - . ID=gene-NIV78_RS22435;Name=NIV78_RS22435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22435 NZ_CP100137.1 Protein Homology CDS 1167262 1167561 . - 0 ID=cds-WP_015877354.1;Parent=gene-NIV78_RS22435;Dbxref=Genbank:WP_015877354.1;Name=WP_015877354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877354.1;locus_tag=NIV78_RS22435;product=DUF4148 domain-containing protein;protein_id=WP_015877354.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1167759 1168576 . - . ID=gene-NIV78_RS22440;Name=NIV78_RS22440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22440 NZ_CP100137.1 Protein Homology CDS 1168228 1168576 . - 0 ID=cds-WP_257757999.1;Parent=gene-NIV78_RS22440;Dbxref=Genbank:WP_257757999.1;Name=WP_257757999.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS22440;product=IS5-like element ISBugl2 family transposase;protein_id=WP_257757999.1;transl_table=11 NZ_CP100137.1 Protein Homology CDS 1167759 1168228 . - 2 ID=cds-WP_257757999.1;Parent=gene-NIV78_RS22440;Dbxref=Genbank:WP_257757999.1;Name=WP_257757999.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS22440;product=IS5-like element ISBugl2 family transposase;protein_id=WP_257757999.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1168715 1169532 . - . ID=gene-NIV78_RS22445;Name=NIV78_RS22445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22445 NZ_CP100137.1 Protein Homology CDS 1169184 1169532 . - 0 ID=cds-WP_085962362.1-6;Parent=gene-NIV78_RS22445;Dbxref=Genbank:WP_085962362.1;Name=WP_085962362.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS22445;product=IS5 family transposase;protein_id=WP_085962362.1;transl_table=11 NZ_CP100137.1 Protein Homology CDS 1168715 1169184 . - 2 ID=cds-WP_085962362.1-6;Parent=gene-NIV78_RS22445;Dbxref=Genbank:WP_085962362.1;Name=WP_085962362.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS22445;product=IS5 family transposase;protein_id=WP_085962362.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1169678 1170955 . + . ID=gene-NIV78_RS22450;Name=codA;gbkey=Gene;gene=codA;gene_biotype=protein_coding;locus_tag=NIV78_RS22450 NZ_CP100137.1 Protein Homology CDS 1169678 1170955 . + 0 ID=cds-WP_015877353.1;Parent=gene-NIV78_RS22450;Dbxref=Genbank:WP_015877353.1;Name=WP_015877353.1;Ontology_term=GO:0016810;gbkey=CDS;gene=codA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877353.1;locus_tag=NIV78_RS22450;product=cytosine deaminase;protein_id=WP_015877353.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 1170959 1171121 . - . ID=gene-NIV78_RS22455;Name=NIV78_RS22455;end_range=1171121,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS22455;partial=true;pseudo=true;start_range=.,1170959 NZ_CP100137.1 Protein Homology CDS 1170959 1171121 . - 0 ID=cds-NIV78_RS22455;Parent=gene-NIV78_RS22455;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1171121,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492354.1;locus_tag=NIV78_RS22455;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,1170959;transl_table=11 NZ_CP100137.1 RefSeq gene 1171526 1172848 . + . ID=gene-NIV78_RS22460;Name=NIV78_RS22460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22460 NZ_CP100137.1 Protein Homology CDS 1171526 1172848 . + 0 ID=cds-WP_174525133.1;Parent=gene-NIV78_RS22460;Dbxref=Genbank:WP_174525133.1;Name=WP_174525133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011205459.1;locus_tag=NIV78_RS22460;product=chloride channel protein;protein_id=WP_174525133.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1172886 1173728 . - . ID=gene-NIV78_RS22465;Name=NIV78_RS22465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22465 NZ_CP100137.1 Protein Homology CDS 1172886 1173728 . - 0 ID=cds-WP_015877351.1;Parent=gene-NIV78_RS22465;Dbxref=Genbank:WP_015877351.1;Name=WP_015877351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014007991.1;locus_tag=NIV78_RS22465;product=M48 family metallopeptidase;protein_id=WP_015877351.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1174368 1175765 . + . ID=gene-NIV78_RS22470;Name=NIV78_RS22470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22470 NZ_CP100137.1 Protein Homology CDS 1174368 1175765 . + 0 ID=cds-WP_017923660.1;Parent=gene-NIV78_RS22470;Dbxref=Genbank:WP_017923660.1;Name=WP_017923660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407367.1;locus_tag=NIV78_RS22470;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_017923660.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1175770 1176777 . + . ID=gene-NIV78_RS22475;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=NIV78_RS22475 NZ_CP100137.1 Protein Homology CDS 1175770 1176777 . + 0 ID=cds-WP_012734033.1;Parent=gene-NIV78_RS22475;Dbxref=Genbank:WP_012734033.1;Name=WP_012734033.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003093053.1;locus_tag=NIV78_RS22475;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_012734033.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1177405 1179921 . + . ID=gene-NIV78_RS22480;Name=NIV78_RS22480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22480 NZ_CP100137.1 Protein Homology CDS 1177405 1179921 . + 0 ID=cds-WP_251107815.1;Parent=gene-NIV78_RS22480;Dbxref=Genbank:WP_251107815.1;Name=WP_251107815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734032.1;locus_tag=NIV78_RS22480;product=membrane-bound PQQ-dependent dehydrogenase%2C glucose/quinate/shikimate family;protein_id=WP_251107815.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1180186 1181223 . + . ID=gene-NIV78_RS22485;Name=NIV78_RS22485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22485 NZ_CP100137.1 Protein Homology CDS 1180186 1181223 . + 0 ID=cds-WP_171467015.1;Parent=gene-NIV78_RS22485;Dbxref=Genbank:WP_171467015.1;Name=WP_171467015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734031.1;locus_tag=NIV78_RS22485;product=porin;protein_id=WP_171467015.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1181317 1183431 . - . ID=gene-NIV78_RS22490;Name=NIV78_RS22490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22490 NZ_CP100137.1 Protein Homology CDS 1181317 1183431 . - 0 ID=cds-WP_012734030.1;Parent=gene-NIV78_RS22490;Dbxref=Genbank:WP_012734030.1;Name=WP_012734030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690161.1;locus_tag=NIV78_RS22490;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WP_012734030.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1183448 1184902 . - . ID=gene-NIV78_RS22495;Name=NIV78_RS22495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22495 NZ_CP100137.1 Protein Homology CDS 1183448 1184902 . - 0 ID=cds-WP_017924021.1;Parent=gene-NIV78_RS22495;Dbxref=Genbank:WP_017924021.1;Name=WP_017924021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734029.1;locus_tag=NIV78_RS22495;product=HlyD family secretion protein;protein_id=WP_017924021.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1184907 1185740 . - . ID=gene-NIV78_RS22500;Name=NIV78_RS22500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22500 NZ_CP100137.1 Protein Homology CDS 1184907 1185740 . - 0 ID=cds-WP_012734028.1;Parent=gene-NIV78_RS22500;Dbxref=Genbank:WP_012734028.1;Name=WP_012734028.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724525.1;locus_tag=NIV78_RS22500;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_012734028.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1185737 1187383 . - . ID=gene-NIV78_RS22505;Name=NIV78_RS22505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22505 NZ_CP100137.1 Protein Homology CDS 1185737 1187383 . - 0 ID=cds-WP_017924498.1;Parent=gene-NIV78_RS22505;Dbxref=Genbank:WP_017924498.1;Name=WP_017924498.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734027.1;locus_tag=NIV78_RS22505;product=TolC family protein;protein_id=WP_017924498.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1187380 1195956 . - . ID=gene-NIV78_RS22510;Name=NIV78_RS22510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22510 NZ_CP100137.1 Protein Homology CDS 1187380 1195956 . - 0 ID=cds-WP_257758002.1;Parent=gene-NIV78_RS22510;Dbxref=Genbank:WP_257758002.1;Name=WP_257758002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690165.1;locus_tag=NIV78_RS22510;product=DUF4347 domain-containing protein;protein_id=WP_257758002.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1196061 1196678 . - . ID=gene-NIV78_RS22515;Name=NIV78_RS22515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22515 NZ_CP100137.1 Protein Homology CDS 1196061 1196678 . - 0 ID=cds-WP_012734025.1;Parent=gene-NIV78_RS22515;Dbxref=Genbank:WP_012734025.1;Name=WP_012734025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734025.1;locus_tag=NIV78_RS22515;product=tail fiber protein;protein_id=WP_012734025.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1196744 1197103 . - . ID=gene-NIV78_RS22520;Name=NIV78_RS22520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22520 NZ_CP100137.1 Protein Homology CDS 1196744 1197103 . - 0 ID=cds-WP_012734024.1;Parent=gene-NIV78_RS22520;Dbxref=Genbank:WP_012734024.1;Name=WP_012734024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734024.1;locus_tag=NIV78_RS22520;product=hypothetical protein;protein_id=WP_012734024.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1197388 1197993 . - . ID=gene-NIV78_RS22525;Name=NIV78_RS22525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22525 NZ_CP100137.1 Protein Homology CDS 1197388 1197993 . - 0 ID=cds-WP_012734023.1;Parent=gene-NIV78_RS22525;Dbxref=Genbank:WP_012734023.1;Name=WP_012734023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423381.1;locus_tag=NIV78_RS22525;product=GNAT family N-acetyltransferase;protein_id=WP_012734023.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1198323 1199747 . - . ID=gene-NIV78_RS22530;Name=NIV78_RS22530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22530 NZ_CP100137.1 Protein Homology CDS 1198323 1199747 . - 0 ID=cds-WP_012734022.1;Parent=gene-NIV78_RS22530;Dbxref=Genbank:WP_012734022.1;Name=WP_012734022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734022.1;locus_tag=NIV78_RS22530;product=cytochrome-c peroxidase;protein_id=WP_012734022.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1199846 1201570 . - . ID=gene-NIV78_RS22535;Name=NIV78_RS22535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22535 NZ_CP100137.1 Protein Homology CDS 1199846 1201570 . - 0 ID=cds-WP_257758071.1;Parent=gene-NIV78_RS22535;Dbxref=Genbank:WP_257758071.1;Name=WP_257758071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690170.1;locus_tag=NIV78_RS22535;product=alkaline phosphatase family protein;protein_id=WP_257758071.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1202412 1203800 . + . ID=gene-NIV78_RS22540;Name=NIV78_RS22540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22540 NZ_CP100137.1 Protein Homology CDS 1202412 1203800 . + 0 ID=cds-WP_012734020.1;Parent=gene-NIV78_RS22540;Dbxref=Genbank:WP_012734020.1;Name=WP_012734020.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734020.1;locus_tag=NIV78_RS22540;product=amino acid permease;protein_id=WP_012734020.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1203840 1205042 . + . ID=gene-NIV78_RS22545;Name=NIV78_RS22545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22545 NZ_CP100137.1 Protein Homology CDS 1203840 1205042 . + 0 ID=cds-WP_012734019.1;Parent=gene-NIV78_RS22545;Dbxref=Genbank:WP_012734019.1;Name=WP_012734019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027522.1;locus_tag=NIV78_RS22545;product=aspartate/tyrosine/aromatic aminotransferase;protein_id=WP_012734019.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1205150 1205539 . + . ID=gene-NIV78_RS22550;Name=NIV78_RS22550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22550 NZ_CP100137.1 Protein Homology CDS 1205150 1205539 . + 0 ID=cds-WP_017423380.1;Parent=gene-NIV78_RS22550;Dbxref=Genbank:WP_017423380.1;Name=WP_017423380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734018.1;locus_tag=NIV78_RS22550;product=DUF488 family protein;protein_id=WP_017423380.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1205811 1206086 . + . ID=gene-NIV78_RS22555;Name=NIV78_RS22555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22555 NZ_CP100137.1 Protein Homology CDS 1205811 1206086 . + 0 ID=cds-WP_012734017.1;Parent=gene-NIV78_RS22555;Dbxref=Genbank:WP_012734017.1;Name=WP_012734017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734017.1;locus_tag=NIV78_RS22555;product=DUF1488 domain-containing protein;protein_id=WP_012734017.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1206187 1206831 . - . ID=gene-NIV78_RS22560;Name=NIV78_RS22560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22560 NZ_CP100137.1 Protein Homology CDS 1206187 1206831 . - 0 ID=cds-WP_012734016.1;Parent=gene-NIV78_RS22560;Dbxref=Genbank:WP_012734016.1;Name=WP_012734016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734016.1;locus_tag=NIV78_RS22560;product=response regulator transcription factor;protein_id=WP_012734016.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1206828 1209158 . - . ID=gene-NIV78_RS22565;Name=NIV78_RS22565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22565 NZ_CP100137.1 Protein Homology CDS 1206828 1209158 . - 0 ID=cds-WP_257758003.1;Parent=gene-NIV78_RS22565;Dbxref=Genbank:WP_257758003.1;Name=WP_257758003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690178.1;locus_tag=NIV78_RS22565;product=PAS domain S-box protein;protein_id=WP_257758003.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1209758 1210780 . + . ID=gene-NIV78_RS22570;Name=NIV78_RS22570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22570 NZ_CP100137.1 Protein Homology CDS 1209758 1210780 . + 0 ID=cds-WP_012734014.1;Parent=gene-NIV78_RS22570;Dbxref=Genbank:WP_012734014.1;Name=WP_012734014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690179.1;locus_tag=NIV78_RS22570;product=VTT domain-containing protein;protein_id=WP_012734014.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1211039 1212760 . + . ID=gene-NIV78_RS22575;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=NIV78_RS22575 NZ_CP100137.1 Protein Homology CDS 1211039 1212760 . + 0 ID=cds-WP_012734013.1;Parent=gene-NIV78_RS22575;Dbxref=Genbank:WP_012734013.1;Name=WP_012734013.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525243.1;locus_tag=NIV78_RS22575;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WP_012734013.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1212850 1213668 . - . ID=gene-NIV78_RS22580;Name=NIV78_RS22580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22580 NZ_CP100137.1 Protein Homology CDS 1212850 1213668 . - 0 ID=cds-WP_012734012.1;Parent=gene-NIV78_RS22580;Dbxref=Genbank:WP_012734012.1;Name=WP_012734012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006052817.1;locus_tag=NIV78_RS22580;product=ProQ/FinO family protein;protein_id=WP_012734012.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1213956 1215755 . + . ID=gene-NIV78_RS22585;Name=NIV78_RS22585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22585 NZ_CP100137.1 Protein Homology CDS 1213956 1215755 . + 0 ID=cds-WP_017923549.1;Parent=gene-NIV78_RS22585;Dbxref=Genbank:WP_017923549.1;Name=WP_017923549.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355245.1;locus_tag=NIV78_RS22585;product=methyl-accepting chemotaxis protein;protein_id=WP_017923549.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1216297 1216587 . + . ID=gene-NIV78_RS22590;Name=NIV78_RS22590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22590 NZ_CP100137.1 Protein Homology CDS 1216297 1216587 . + 0 ID=cds-WP_012734010.1;Parent=gene-NIV78_RS22590;Dbxref=Genbank:WP_012734010.1;Name=WP_012734010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734010.1;locus_tag=NIV78_RS22590;product=H-NS histone family protein;protein_id=WP_012734010.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1217610 1219772 . + . ID=gene-NIV78_RS22595;Name=NIV78_RS22595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22595 NZ_CP100137.1 Protein Homology CDS 1217610 1219772 . + 0 ID=cds-WP_251107820.1;Parent=gene-NIV78_RS22595;Dbxref=Genbank:WP_251107820.1;Name=WP_251107820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734009.1;locus_tag=NIV78_RS22595;product=hypothetical protein;protein_id=WP_251107820.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1220048 1220221 . + . ID=gene-NIV78_RS22600;Name=NIV78_RS22600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22600 NZ_CP100137.1 GeneMarkS-2+ CDS 1220048 1220221 . + 0 ID=cds-WP_153478898.1;Parent=gene-NIV78_RS22600;Dbxref=Genbank:WP_153478898.1;Name=WP_153478898.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS22600;product=hypothetical protein;protein_id=WP_153478898.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1220407 1222704 . - . ID=gene-NIV78_RS22605;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=NIV78_RS22605 NZ_CP100137.1 Protein Homology CDS 1220407 1222704 . - 0 ID=cds-WP_251107933.1;Parent=gene-NIV78_RS22605;Dbxref=Genbank:WP_251107933.1;Name=WP_251107933.1;Ontology_term=GO:0009252,GO:0003824,GO:0009274;gbkey=CDS;gene=pbpC;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=catalytic activity|0003824||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734008.1;locus_tag=NIV78_RS22605;product=penicillin-binding protein 1C;protein_id=WP_251107933.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1222791 1228886 . - . ID=gene-NIV78_RS22610;Name=NIV78_RS22610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22610 NZ_CP100137.1 Protein Homology CDS 1222791 1228886 . - 0 ID=cds-WP_251107821.1;Parent=gene-NIV78_RS22610;Dbxref=Genbank:WP_251107821.1;Name=WP_251107821.1;Ontology_term=GO:0004866;gbkey=CDS;go_function=endopeptidase inhibitor activity|0004866||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734007.1;locus_tag=NIV78_RS22610;product=MG2 domain-containing protein;protein_id=WP_251107821.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1229355 1230464 . + . ID=gene-NIV78_RS22615;Name=NIV78_RS22615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22615 NZ_CP100137.1 Protein Homology CDS 1229355 1230464 . + 0 ID=cds-WP_017922683.1;Parent=gene-NIV78_RS22615;Dbxref=Genbank:WP_017922683.1;Name=WP_017922683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756341.1;locus_tag=NIV78_RS22615;product=porin;protein_id=WP_017922683.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1230576 1231874 . - . ID=gene-NIV78_RS22620;Name=NIV78_RS22620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22620 NZ_CP100137.1 Protein Homology CDS 1230576 1231874 . - 0 ID=cds-WP_012734005.1;Parent=gene-NIV78_RS22620;Dbxref=Genbank:WP_012734005.1;Name=WP_012734005.1;Ontology_term=GO:0016765;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198657.1;locus_tag=NIV78_RS22620;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_012734005.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1232310 1232741 . - . ID=gene-NIV78_RS22625;Name=NIV78_RS22625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22625 NZ_CP100137.1 Protein Homology CDS 1232310 1232741 . - 0 ID=cds-WP_245163809.1;Parent=gene-NIV78_RS22625;Dbxref=Genbank:WP_245163809.1;Name=WP_245163809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547570.1;locus_tag=NIV78_RS22625;product=hypothetical protein;protein_id=WP_245163809.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1233193 1234989 . - . ID=gene-NIV78_RS22630;Name=NIV78_RS22630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22630 NZ_CP100137.1 Protein Homology CDS 1233193 1234989 . - 0 ID=cds-WP_012734003.1;Parent=gene-NIV78_RS22630;Dbxref=Genbank:WP_012734003.1;Name=WP_012734003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004543637.1;locus_tag=NIV78_RS22630;product=chloride channel protein;protein_id=WP_012734003.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1235022 1235435 . - . ID=gene-NIV78_RS22635;Name=NIV78_RS22635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22635 NZ_CP100137.1 Protein Homology CDS 1235022 1235435 . - 0 ID=cds-WP_026051790.1;Parent=gene-NIV78_RS22635;Dbxref=Genbank:WP_026051790.1;Name=WP_026051790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690200.1;locus_tag=NIV78_RS22635;product=MarR family transcriptional regulator;protein_id=WP_026051790.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1235539 1236711 . - . ID=gene-NIV78_RS22640;Name=NIV78_RS22640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22640 NZ_CP100137.1 Protein Homology CDS 1235539 1236711 . - 0 ID=cds-WP_012734001.1;Parent=gene-NIV78_RS22640;Dbxref=Genbank:WP_012734001.1;Name=WP_012734001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734001.1;locus_tag=NIV78_RS22640;product=HPP family protein;protein_id=WP_012734001.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1237011 1237964 . + . ID=gene-NIV78_RS22645;Name=NIV78_RS22645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22645 NZ_CP100137.1 Protein Homology CDS 1237011 1237964 . + 0 ID=cds-WP_017922681.1;Parent=gene-NIV78_RS22645;Dbxref=Genbank:WP_017922681.1;Name=WP_017922681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734000.1;locus_tag=NIV78_RS22645;product=LysR family transcriptional regulator;protein_id=WP_017922681.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1237954 1239039 . - . ID=gene-NIV78_RS22650;Name=NIV78_RS22650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22650 NZ_CP100137.1 Protein Homology CDS 1237954 1239039 . - 0 ID=cds-WP_012733999.1;Parent=gene-NIV78_RS22650;Dbxref=Genbank:WP_012733999.1;Name=WP_012733999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009976505.1;locus_tag=NIV78_RS22650;product=ionic transporter y4hA;protein_id=WP_012733999.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1239330 1239998 . + . ID=gene-NIV78_RS22655;Name=NIV78_RS22655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22655 NZ_CP100137.1 Protein Homology CDS 1239330 1239998 . + 0 ID=cds-WP_012733998.1;Parent=gene-NIV78_RS22655;Dbxref=Genbank:WP_012733998.1;Name=WP_012733998.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532930.1;locus_tag=NIV78_RS22655;product=NAAT family transporter;protein_id=WP_012733998.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1240026 1240889 . - . ID=gene-NIV78_RS22660;Name=NIV78_RS22660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22660 NZ_CP100137.1 Protein Homology CDS 1240026 1240889 . - 0 ID=cds-WP_012733997.1;Parent=gene-NIV78_RS22660;Dbxref=Genbank:WP_012733997.1;Name=WP_012733997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733997.1;locus_tag=NIV78_RS22660;product=CPBP family intramembrane metalloprotease;protein_id=WP_012733997.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1241075 1241788 . - . ID=gene-NIV78_RS22665;Name=NIV78_RS22665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22665 NZ_CP100137.1 Protein Homology CDS 1241075 1241788 . - 0 ID=cds-WP_012733996.1;Parent=gene-NIV78_RS22665;Dbxref=Genbank:WP_012733996.1;Name=WP_012733996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733996.1;locus_tag=NIV78_RS22665;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_012733996.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1241996 1242949 . - . ID=gene-NIV78_RS22670;Name=NIV78_RS22670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22670 NZ_CP100137.1 Protein Homology CDS 1241996 1242949 . - 0 ID=cds-WP_017924418.1;Parent=gene-NIV78_RS22670;Dbxref=Genbank:WP_017924418.1;Name=WP_017924418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424220.1;locus_tag=NIV78_RS22670;product=helix-turn-helix transcriptional regulator;protein_id=WP_017924418.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1243112 1243621 . + . ID=gene-NIV78_RS22675;Name=NIV78_RS22675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22675 NZ_CP100137.1 Protein Homology CDS 1243112 1243621 . + 0 ID=cds-WP_012733994.1;Parent=gene-NIV78_RS22675;Dbxref=Genbank:WP_012733994.1;Name=WP_012733994.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733994.1;locus_tag=NIV78_RS22675;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_012733994.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1243626 1244615 . + . ID=gene-NIV78_RS22680;Name=NIV78_RS22680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22680 NZ_CP100137.1 Protein Homology CDS 1243626 1244615 . + 0 ID=cds-WP_251107823.1;Parent=gene-NIV78_RS22680;Dbxref=Genbank:WP_251107823.1;Name=WP_251107823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733993.1;locus_tag=NIV78_RS22680;product=FecR domain-containing protein;protein_id=WP_251107823.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1244784 1247276 . + . ID=gene-NIV78_RS22685;Name=NIV78_RS22685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22685 NZ_CP100137.1 Protein Homology CDS 1244784 1247276 . + 0 ID=cds-WP_251107824.1;Parent=gene-NIV78_RS22685;Dbxref=Genbank:WP_251107824.1;Name=WP_251107824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733992.1;locus_tag=NIV78_RS22685;product=TonB-dependent receptor;protein_id=WP_251107824.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1247377 1248876 . - . ID=gene-NIV78_RS22690;Name=NIV78_RS22690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22690 NZ_CP100137.1 Protein Homology CDS 1247377 1248876 . - 0 ID=cds-WP_251107825.1;Parent=gene-NIV78_RS22690;Dbxref=Genbank:WP_251107825.1;Name=WP_251107825.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733991.1;locus_tag=NIV78_RS22690;product=efflux transporter outer membrane subunit;protein_id=WP_251107825.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1248939 1250012 . - . ID=gene-NIV78_RS22695;Name=NIV78_RS22695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22695 NZ_CP100137.1 Protein Homology CDS 1248939 1250012 . - 0 ID=cds-WP_251119108.1;Parent=gene-NIV78_RS22695;Dbxref=Genbank:WP_251119108.1;Name=WP_251119108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733990.1;locus_tag=NIV78_RS22695;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_251119108.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1250009 1250227 . - . ID=gene-NIV78_RS22700;Name=NIV78_RS22700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22700 NZ_CP100137.1 Protein Homology CDS 1250009 1250227 . - 0 ID=cds-WP_012733989.1;Parent=gene-NIV78_RS22700;Dbxref=Genbank:WP_012733989.1;Name=WP_012733989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733989.1;locus_tag=NIV78_RS22700;product=DUF1656 domain-containing protein;protein_id=WP_012733989.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1250260 1252410 . - . ID=gene-NIV78_RS22705;Name=NIV78_RS22705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22705 NZ_CP100137.1 Protein Homology CDS 1250260 1252410 . - 0 ID=cds-WP_251107827.1;Parent=gene-NIV78_RS22705;Dbxref=Genbank:WP_251107827.1;Name=WP_251107827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756536.1;locus_tag=NIV78_RS22705;product=FUSC family protein;protein_id=WP_251107827.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1252407 1252859 . - . ID=gene-NIV78_RS22710;Name=NIV78_RS22710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22710 NZ_CP100137.1 Protein Homology CDS 1252407 1252859 . - 0 ID=cds-WP_043227367.1;Parent=gene-NIV78_RS22710;Dbxref=Genbank:WP_043227367.1;Name=WP_043227367.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733987.1;locus_tag=NIV78_RS22710;product=winged helix DNA-binding protein;protein_id=WP_043227367.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1253348 1254571 . + . ID=gene-NIV78_RS22715;Name=NIV78_RS22715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22715 NZ_CP100137.1 Protein Homology CDS 1253348 1254571 . + 0 ID=cds-WP_017924288.1;Parent=gene-NIV78_RS22715;Dbxref=Genbank:WP_017924288.1;Name=WP_017924288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733986.1;locus_tag=NIV78_RS22715;product=DUF2252 family protein;protein_id=WP_017924288.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1254635 1255747 . + . ID=gene-NIV78_RS22720;Name=NIV78_RS22720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22720 NZ_CP100137.1 Protein Homology CDS 1254635 1255747 . + 0 ID=cds-WP_017924289.1;Parent=gene-NIV78_RS22720;Dbxref=Genbank:WP_017924289.1;Name=WP_017924289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733985.1;locus_tag=NIV78_RS22720;product=putative zinc-binding metallopeptidase;protein_id=WP_017924289.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1255796 1257412 . - . ID=gene-NIV78_RS22725;Name=NIV78_RS22725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22725 NZ_CP100137.1 Protein Homology CDS 1255796 1257412 . - 0 ID=cds-WP_251107828.1;Parent=gene-NIV78_RS22725;Dbxref=Genbank:WP_251107828.1;Name=WP_251107828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690220.1;locus_tag=NIV78_RS22725;product=NYN domain-containing protein;protein_id=WP_251107828.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1257562 1257891 . - . ID=gene-NIV78_RS22730;Name=NIV78_RS22730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22730 NZ_CP100137.1 Protein Homology CDS 1257562 1257891 . - 0 ID=cds-WP_251107829.1;Parent=gene-NIV78_RS22730;Dbxref=Genbank:WP_251107829.1;Name=WP_251107829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733983.1;locus_tag=NIV78_RS22730;product=hypothetical protein;protein_id=WP_251107829.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1258107 1259273 . + . ID=gene-NIV78_RS22735;Name=NIV78_RS22735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22735 NZ_CP100137.1 Protein Homology CDS 1258107 1259273 . + 0 ID=cds-WP_017923760.1;Parent=gene-NIV78_RS22735;Dbxref=Genbank:WP_017923760.1;Name=WP_017923760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733982.1;locus_tag=NIV78_RS22735;product=serine hydrolase;protein_id=WP_017923760.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 1259340 1259453 . - . ID=gene-NIV78_RS22740;Name=NIV78_RS22740;end_range=1259453,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS22740;partial=true;pseudo=true NZ_CP100137.1 Protein Homology CDS 1259340 1259453 . - 0 ID=cds-NIV78_RS22740;Parent=gene-NIV78_RS22740;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1259453,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732717.1;locus_tag=NIV78_RS22740;partial=true;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 1260175 1260418 . + . ID=gene-NIV78_RS22745;Name=NIV78_RS22745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS22745;partial=true;pseudo=true;start_range=.,1260175 NZ_CP100137.1 Protein Homology CDS 1260175 1260418 . + 0 ID=cds-NIV78_RS22745;Parent=gene-NIV78_RS22745;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732717.1;locus_tag=NIV78_RS22745;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,1260175;transl_table=11 NZ_CP100137.1 RefSeq gene 1260754 1261131 . + . ID=gene-NIV78_RS22750;Name=NIV78_RS22750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22750 NZ_CP100137.1 Protein Homology CDS 1260754 1261131 . + 0 ID=cds-WP_017923759.1;Parent=gene-NIV78_RS22750;Dbxref=Genbank:WP_017923759.1;Name=WP_017923759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733981.1;locus_tag=NIV78_RS22750;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_017923759.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1261134 1262429 . + . ID=gene-NIV78_RS22755;Name=NIV78_RS22755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22755 NZ_CP100137.1 Protein Homology CDS 1261134 1262429 . + 0 ID=cds-WP_251107830.1;Parent=gene-NIV78_RS22755;Dbxref=Genbank:WP_251107830.1;Name=WP_251107830.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733980.1;locus_tag=NIV78_RS22755;product=MFS transporter;protein_id=WP_251107830.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1262438 1263046 . + . ID=gene-NIV78_RS22760;Name=NIV78_RS22760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22760 NZ_CP100137.1 GeneMarkS-2+ CDS 1262438 1263046 . + 0 ID=cds-WP_257758013.1;Parent=gene-NIV78_RS22760;Dbxref=Genbank:WP_257758013.1;Name=WP_257758013.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS22760;product=hypothetical protein;protein_id=WP_257758013.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1263078 1263895 . + . ID=gene-NIV78_RS22765;Name=NIV78_RS22765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22765 NZ_CP100137.1 Protein Homology CDS 1263078 1263426 . + 0 ID=cds-WP_085962356.1-3;Parent=gene-NIV78_RS22765;Dbxref=Genbank:WP_085962356.1;Name=WP_085962356.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS22765;product=IS5 family transposase;protein_id=WP_085962356.1;transl_table=11 NZ_CP100137.1 Protein Homology CDS 1263426 1263895 . + 2 ID=cds-WP_085962356.1-3;Parent=gene-NIV78_RS22765;Dbxref=Genbank:WP_085962356.1;Name=WP_085962356.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS22765;product=IS5 family transposase;protein_id=WP_085962356.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1263892 1264338 . + . ID=gene-NIV78_RS22770;Name=NIV78_RS22770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22770 NZ_CP100137.1 Protein Homology CDS 1263892 1264338 . + 0 ID=cds-WP_017924974.1;Parent=gene-NIV78_RS22770;Dbxref=Genbank:WP_017924974.1;Name=WP_017924974.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04267.2;locus_tag=NIV78_RS22770;product=HEXXH motif domain-containing protein;protein_id=WP_017924974.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 1264543 1264689 . - . ID=gene-NIV78_RS22775;Name=NIV78_RS22775;end_range=1264689,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS22775;partial=true;pseudo=true;start_range=.,1264543 NZ_CP100137.1 Protein Homology CDS 1264543 1264689 . - 0 ID=cds-NIV78_RS22775;Parent=gene-NIV78_RS22775;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1264689,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732717.1;locus_tag=NIV78_RS22775;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,1264543;transl_table=11 NZ_CP100137.1 RefSeq gene 1264800 1265390 . - . ID=gene-NIV78_RS22780;Name=pcaG;gbkey=Gene;gene=pcaG;gene_biotype=protein_coding;locus_tag=NIV78_RS22780 NZ_CP100137.1 Protein Homology CDS 1264800 1265390 . - 0 ID=cds-WP_012733978.1;Parent=gene-NIV78_RS22780;Dbxref=Genbank:WP_012733978.1;Name=WP_012733978.1;Ontology_term=GO:0046278,GO:0018578;gbkey=CDS;gene=pcaG;go_function=protocatechuate 3%2C4-dioxygenase activity|0018578||IEA;go_process=3%2C4-dihydroxybenzoate metabolic process|0046278||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604120.1;locus_tag=NIV78_RS22780;product=protocatechuate 3%2C4-dioxygenase subunit alpha;protein_id=WP_012733978.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1265393 1266097 . - . ID=gene-NIV78_RS22785;Name=pcaH;gbkey=Gene;gene=pcaH;gene_biotype=protein_coding;locus_tag=NIV78_RS22785 NZ_CP100137.1 Protein Homology CDS 1265393 1266097 . - 0 ID=cds-WP_012733977.1;Parent=gene-NIV78_RS22785;Dbxref=Genbank:WP_012733977.1;Name=WP_012733977.1;Ontology_term=GO:0046278,GO:0018578;gbkey=CDS;gene=pcaH;go_function=protocatechuate 3%2C4-dioxygenase activity|0018578||IEA;go_process=3%2C4-dihydroxybenzoate metabolic process|0046278||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725036.1;locus_tag=NIV78_RS22785;product=protocatechuate 3%2C4-dioxygenase subunit beta;protein_id=WP_012733977.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1266200 1267189 . + . ID=gene-NIV78_RS22790;Name=pcaQ;gbkey=Gene;gene=pcaQ;gene_biotype=protein_coding;locus_tag=NIV78_RS22790 NZ_CP100137.1 Protein Homology CDS 1266200 1267189 . + 0 ID=cds-WP_012733976.1;Parent=gene-NIV78_RS22790;Dbxref=Genbank:WP_012733976.1;Name=WP_012733976.1;Ontology_term=GO:0019619,GO:0045893,GO:0001228;gbkey=CDS;gene=pcaQ;go_function=DNA-binding transcription activator activity%2C RNA polymerase II-specific|0001228||IEA;go_process=3%2C4-dihydroxybenzoate catabolic process|0019619||IEA,positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424790.1;locus_tag=NIV78_RS22790;product=pca operon transcription factor PcaQ;protein_id=WP_012733976.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1267299 1268768 . + . ID=gene-NIV78_RS22795;Name=NIV78_RS22795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22795 NZ_CP100137.1 Protein Homology CDS 1267299 1268768 . + 0 ID=cds-WP_169511544.1;Parent=gene-NIV78_RS22795;Dbxref=Genbank:WP_169511544.1;Name=WP_169511544.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009896627.1;locus_tag=NIV78_RS22795;product=diguanylate cyclase;protein_id=WP_169511544.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1269308 1270981 . + . ID=gene-NIV78_RS22800;Name=NIV78_RS22800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22800 NZ_CP100137.1 Protein Homology CDS 1269308 1270981 . + 0 ID=cds-WP_017923494.1;Parent=gene-NIV78_RS22800;Dbxref=Genbank:WP_017923494.1;Name=WP_017923494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733974.1;locus_tag=NIV78_RS22800;product=acyl-CoA synthetase;protein_id=WP_017923494.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1271091 1271582 . - . ID=gene-NIV78_RS22805;Name=NIV78_RS22805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22805 NZ_CP100137.1 Protein Homology CDS 1271091 1271582 . - 0 ID=cds-WP_251107833.1;Parent=gene-NIV78_RS22805;Dbxref=Genbank:WP_251107833.1;Name=WP_251107833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010118287.1;locus_tag=NIV78_RS22805;product=cupin domain-containing protein;protein_id=WP_251107833.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1271732 1273384 . + . ID=gene-NIV78_RS22810;Name=NIV78_RS22810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22810 NZ_CP100137.1 Protein Homology CDS 1271732 1273384 . + 0 ID=cds-WP_241766964.1;Parent=gene-NIV78_RS22810;Dbxref=Genbank:WP_241766964.1;Name=WP_241766964.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024371.2;locus_tag=NIV78_RS22810;product=DUF3857 domain-containing protein;protein_id=WP_241766964.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1273366 1273629 . + . ID=gene-NIV78_RS22815;Name=NIV78_RS22815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22815 NZ_CP100137.1 Protein Homology CDS 1273366 1273629 . + 0 ID=cds-WP_251107834.1;Parent=gene-NIV78_RS22815;Dbxref=Genbank:WP_251107834.1;Name=WP_251107834.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024372.2;locus_tag=NIV78_RS22815;product=DUF3858 domain-containing protein;protein_id=WP_251107834.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1273896 1274450 . + . ID=gene-NIV78_RS22820;Name=NIV78_RS22820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22820 NZ_CP100137.1 GeneMarkS-2+ CDS 1273896 1274450 . + 0 ID=cds-WP_050811450.1;Parent=gene-NIV78_RS22820;Dbxref=Genbank:WP_050811450.1;Name=WP_050811450.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS22820;product=hypothetical protein;protein_id=WP_050811450.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1274612 1276309 . + . ID=gene-NIV78_RS22825;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=NIV78_RS22825 NZ_CP100137.1 Protein Homology CDS 1274612 1276309 . + 0 ID=cds-WP_251107835.1;Parent=gene-NIV78_RS22825;Dbxref=Genbank:WP_251107835.1;Name=WP_251107835.1;Ontology_term=GO:0006098,GO:0004345;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733970.1;locus_tag=NIV78_RS22825;product=glucose-6-phosphate dehydrogenase;protein_id=WP_251107835.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1276396 1277196 . + . ID=gene-NIV78_RS22830;Name=NIV78_RS22830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22830 NZ_CP100137.1 Protein Homology CDS 1276396 1277196 . + 0 ID=cds-WP_012733969.1;Parent=gene-NIV78_RS22830;Dbxref=Genbank:WP_012733969.1;Name=WP_012733969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690337.1;locus_tag=NIV78_RS22830;product=ROK family protein;protein_id=WP_012733969.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1277333 1278106 . + . ID=gene-NIV78_RS22835;Name=cobF;gbkey=Gene;gene=cobF;gene_biotype=protein_coding;locus_tag=NIV78_RS22835 NZ_CP100137.1 Protein Homology CDS 1277333 1278106 . + 0 ID=cds-WP_124837291.1;Parent=gene-NIV78_RS22835;Dbxref=Genbank:WP_124837291.1;Name=WP_124837291.1;Ontology_term=GO:0009236,GO:0043819;gbkey=CDS;gene=cobF;go_function=precorrin-6A synthase (deacetylating) activity|0043819||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733968.1;locus_tag=NIV78_RS22835;product=precorrin-6A synthase (deacetylating);protein_id=WP_124837291.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1278122 1279102 . - . ID=gene-NIV78_RS22840;Name=NIV78_RS22840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22840 NZ_CP100137.1 Protein Homology CDS 1278122 1279102 . - 0 ID=cds-WP_012733967.1;Parent=gene-NIV78_RS22840;Dbxref=Genbank:WP_012733967.1;Name=WP_012733967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011852958.1;locus_tag=NIV78_RS22840;product=alpha/beta hydrolase;protein_id=WP_012733967.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1279337 1281046 . + . ID=gene-NIV78_RS22845;Name=NIV78_RS22845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22845 NZ_CP100137.1 Protein Homology CDS 1279337 1281046 . + 0 ID=cds-WP_153478880.1;Parent=gene-NIV78_RS22845;Dbxref=Genbank:WP_153478880.1;Name=WP_153478880.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733966.1;locus_tag=NIV78_RS22845;product=VRR-NUC domain-containing protein;protein_id=WP_153478880.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1281043 1283370 . + . ID=gene-NIV78_RS22850;Name=NIV78_RS22850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22850 NZ_CP100137.1 Protein Homology CDS 1281043 1283370 . + 0 ID=cds-WP_153478879.1;Parent=gene-NIV78_RS22850;Dbxref=Genbank:WP_153478879.1;Name=WP_153478879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733965.1;locus_tag=NIV78_RS22850;product=ATP-dependent DNA helicase;protein_id=WP_153478879.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1283477 1284754 . - . ID=gene-NIV78_RS22855;Name=NIV78_RS22855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22855 NZ_CP100137.1 Protein Homology CDS 1283477 1284754 . - 0 ID=cds-WP_012733964.1;Parent=gene-NIV78_RS22855;Dbxref=Genbank:WP_012733964.1;Name=WP_012733964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549908.1;locus_tag=NIV78_RS22855;product=acyl-CoA dehydrogenase family protein;protein_id=WP_012733964.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1285112 1289437 . + . ID=gene-NIV78_RS22860;Name=NIV78_RS22860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22860 NZ_CP100137.1 Protein Homology CDS 1285112 1289437 . + 0 ID=cds-WP_257758018.1;Parent=gene-NIV78_RS22860;Dbxref=Genbank:WP_257758018.1;Name=WP_257758018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020066443.1;locus_tag=NIV78_RS22860;product=ATP-binding protein;protein_id=WP_257758018.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1289842 1291563 . + . ID=gene-NIV78_RS22865;Name=NIV78_RS22865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22865 NZ_CP100137.1 Protein Homology CDS 1289842 1291563 . + 0 ID=cds-WP_257758019.1;Parent=gene-NIV78_RS22865;Dbxref=Genbank:WP_257758019.1;Name=WP_257758019.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733754.1;locus_tag=NIV78_RS22865;product=methyl-accepting chemotaxis protein;protein_id=WP_257758019.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1292011 1292499 . + . ID=gene-NIV78_RS22870;Name=NIV78_RS22870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22870 NZ_CP100137.1 Protein Homology CDS 1292011 1292499 . + 0 ID=cds-WP_026051410.1;Parent=gene-NIV78_RS22870;Dbxref=Genbank:WP_026051410.1;Name=WP_026051410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699883.1;locus_tag=NIV78_RS22870;product=hypothetical protein;protein_id=WP_026051410.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1292740 1294725 . + . ID=gene-NIV78_RS22875;Name=NIV78_RS22875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22875 NZ_CP100137.1 Protein Homology CDS 1292740 1294725 . + 0 ID=cds-WP_251107934.1;Parent=gene-NIV78_RS22875;Dbxref=Genbank:WP_251107934.1;Name=WP_251107934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733961.1;locus_tag=NIV78_RS22875;product=hypothetical protein;protein_id=WP_251107934.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1294828 1295034 . + . ID=gene-NIV78_RS22880;Name=NIV78_RS22880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22880 NZ_CP100137.1 Protein Homology CDS 1294828 1295034 . + 0 ID=cds-WP_017423524.1;Parent=gene-NIV78_RS22880;Dbxref=Genbank:WP_017423524.1;Name=WP_017423524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423524.1;locus_tag=NIV78_RS22880;product=hypothetical protein;protein_id=WP_017423524.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1295789 1297348 . + . ID=gene-NIV78_RS22885;Name=NIV78_RS22885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22885 NZ_CP100137.1 Protein Homology CDS 1295789 1297348 . + 0 ID=cds-WP_012733960.1;Parent=gene-NIV78_RS22885;Dbxref=Genbank:WP_012733960.1;Name=WP_012733960.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733960.1;locus_tag=NIV78_RS22885;product=PAS domain-containing methyl-accepting chemotaxis protein;protein_id=WP_012733960.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1297938 1299503 . + . ID=gene-NIV78_RS22890;Name=NIV78_RS22890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22890 NZ_CP100137.1 Protein Homology CDS 1297938 1299503 . + 0 ID=cds-WP_012733959.1;Parent=gene-NIV78_RS22890;Dbxref=Genbank:WP_012733959.1;Name=WP_012733959.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014972469.1;locus_tag=NIV78_RS22890;product=methyl-accepting chemotaxis protein;protein_id=WP_012733959.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 1299517 1299917 . + . ID=gene-NIV78_RS22895;Name=NIV78_RS22895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS22895;partial=true;pseudo=true;start_range=.,1299517 NZ_CP100137.1 Protein Homology CDS 1299517 1299917 . + 0 ID=cds-NIV78_RS22895;Parent=gene-NIV78_RS22895;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016449792.1;locus_tag=NIV78_RS22895;partial=true;product=fumarylacetoacetate hydrolase family protein;pseudo=true;start_range=.,1299517;transl_table=11 NZ_CP100137.1 RefSeq gene 1300196 1300951 . + . ID=gene-NIV78_RS22900;Name=NIV78_RS22900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22900 NZ_CP100137.1 Protein Homology CDS 1300196 1300951 . + 0 ID=cds-WP_241766848.1;Parent=gene-NIV78_RS22900;Dbxref=Genbank:WP_241766848.1;Name=WP_241766848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733958.1;locus_tag=NIV78_RS22900;product=VOC family protein;protein_id=WP_241766848.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1301198 1302106 . + . ID=gene-NIV78_RS22905;Name=NIV78_RS22905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22905 NZ_CP100137.1 Protein Homology CDS 1301198 1302106 . + 0 ID=cds-WP_017923164.1;Parent=gene-NIV78_RS22905;Dbxref=Genbank:WP_017923164.1;Name=WP_017923164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733957.1;locus_tag=NIV78_RS22905;product=transporter;protein_id=WP_017923164.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1302686 1304224 . + . ID=gene-NIV78_RS22910;Name=NIV78_RS22910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22910 NZ_CP100137.1 Protein Homology CDS 1302686 1304224 . + 0 ID=cds-WP_257758020.1;Parent=gene-NIV78_RS22910;Dbxref=Genbank:WP_257758020.1;Name=WP_257758020.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762108.1;locus_tag=NIV78_RS22910;product=methyl-accepting chemotaxis protein;protein_id=WP_257758020.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1304329 1305096 . - . ID=gene-NIV78_RS22915;Name=NIV78_RS22915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22915 NZ_CP100137.1 Protein Homology CDS 1304329 1305096 . - 0 ID=cds-WP_017923161.1;Parent=gene-NIV78_RS22915;Dbxref=Genbank:WP_017923161.1;Name=WP_017923161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733955.1;locus_tag=NIV78_RS22915;product=glycoside hydrolase;protein_id=WP_017923161.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1305249 1305698 . - . ID=gene-NIV78_RS22920;Name=NIV78_RS22920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22920 NZ_CP100137.1 GeneMarkS-2+ CDS 1305249 1305698 . - 0 ID=cds-WP_157384133.1;Parent=gene-NIV78_RS22920;Dbxref=Genbank:WP_157384133.1;Name=WP_157384133.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS22920;product=hypothetical protein;protein_id=WP_157384133.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1305872 1306150 . + . ID=gene-NIV78_RS22925;Name=NIV78_RS22925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22925 NZ_CP100137.1 Protein Homology CDS 1305872 1306150 . + 0 ID=cds-WP_017425513.1;Parent=gene-NIV78_RS22925;Dbxref=Genbank:WP_017425513.1;Name=WP_017425513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425513.1;locus_tag=NIV78_RS22925;product=hypothetical protein;protein_id=WP_017425513.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1306407 1306976 . + . ID=gene-NIV78_RS22930;Name=NIV78_RS22930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22930 NZ_CP100137.1 Protein Homology CDS 1306407 1306976 . + 0 ID=cds-WP_012733954.1;Parent=gene-NIV78_RS22930;Dbxref=Genbank:WP_012733954.1;Name=WP_012733954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733954.1;locus_tag=NIV78_RS22930;product=GNAT family N-acetyltransferase;protein_id=WP_012733954.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1307384 1308967 . + . ID=gene-NIV78_RS22935;Name=NIV78_RS22935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22935 NZ_CP100137.1 Protein Homology CDS 1307384 1308967 . + 0 ID=cds-WP_017923238.1;Parent=gene-NIV78_RS22935;Dbxref=Genbank:WP_017923238.1;Name=WP_017923238.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733953.1;locus_tag=NIV78_RS22935;product=methyl-accepting chemotaxis protein;protein_id=WP_017923238.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1308894 1309814 . - . ID=gene-NIV78_RS22940;Name=NIV78_RS22940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22940 NZ_CP100137.1 Protein Homology CDS 1308894 1309814 . - 0 ID=cds-WP_251107839.1;Parent=gene-NIV78_RS22940;Dbxref=Genbank:WP_251107839.1;Name=WP_251107839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013588713.1;locus_tag=NIV78_RS22940;product=porin;protein_id=WP_251107839.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1309791 1310390 . + . ID=gene-NIV78_RS22945;Name=NIV78_RS22945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22945 NZ_CP100137.1 Protein Homology CDS 1309791 1310390 . + 0 ID=cds-WP_230674534.1;Parent=gene-NIV78_RS22945;Dbxref=Genbank:WP_230674534.1;Name=WP_230674534.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012312.2;locus_tag=NIV78_RS22945;product=MFS transporter;protein_id=WP_230674534.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1310425 1311570 . + . ID=gene-NIV78_RS22950;Name=NIV78_RS22950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22950 NZ_CP100137.1 Protein Homology CDS 1310425 1311570 . + 0 ID=cds-WP_257758023.1;Parent=gene-NIV78_RS22950;Dbxref=Genbank:WP_257758023.1;Name=WP_257758023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733952.1;locus_tag=NIV78_RS22950;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=WP_257758023.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1311707 1312834 . + . ID=gene-NIV78_RS22955;Name=NIV78_RS22955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22955 NZ_CP100137.1 Protein Homology CDS 1311707 1312834 . + 0 ID=cds-WP_153478871.1;Parent=gene-NIV78_RS22955;Dbxref=Genbank:WP_153478871.1;Name=WP_153478871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425302.1;locus_tag=NIV78_RS22955;product=cupin domain-containing protein;protein_id=WP_153478871.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1312945 1313946 . - . ID=gene-NIV78_RS22960;Name=NIV78_RS22960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22960 NZ_CP100137.1 Protein Homology CDS 1312945 1313946 . - 0 ID=cds-WP_017425303.1;Parent=gene-NIV78_RS22960;Dbxref=Genbank:WP_017425303.1;Name=WP_017425303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733950.1;locus_tag=NIV78_RS22960;product=hypothetical protein;protein_id=WP_017425303.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1314478 1315350 . + . ID=gene-NIV78_RS22965;Name=NIV78_RS22965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22965 NZ_CP100137.1 Protein Homology CDS 1314478 1315350 . + 0 ID=cds-WP_257758025.1;Parent=gene-NIV78_RS22965;Dbxref=Genbank:WP_257758025.1;Name=WP_257758025.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733949.1;locus_tag=NIV78_RS22965;product=helix-turn-helix domain-containing protein;protein_id=WP_257758025.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1315395 1315895 . + . ID=gene-NIV78_RS22970;Name=NIV78_RS22970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22970 NZ_CP100137.1 Protein Homology CDS 1315395 1315895 . + 0 ID=cds-WP_017923995.1;Parent=gene-NIV78_RS22970;Dbxref=Genbank:WP_017923995.1;Name=WP_017923995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749397.1;locus_tag=NIV78_RS22970;product=molybdopterin-dependent oxidoreductase;protein_id=WP_017923995.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1315897 1317711 . + . ID=gene-NIV78_RS22975;Name=atsR;gbkey=Gene;gene=atsR;gene_biotype=protein_coding;locus_tag=NIV78_RS22975 NZ_CP100137.1 Protein Homology CDS 1315897 1317711 . + 0 ID=cds-WP_017923996.1;Parent=gene-NIV78_RS22975;Dbxref=Genbank:WP_017923996.1;Name=WP_017923996.1;Note=AtsR signifies Adherence and T6SS Regulator.;gbkey=CDS;gene=atsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485471.1;locus_tag=NIV78_RS22975;product=hybrid sensor histidine kinase/response regulator AtsR;protein_id=WP_017923996.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1317914 1318861 . + . ID=gene-NIV78_RS22980;Name=NIV78_RS22980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22980 NZ_CP100137.1 Protein Homology CDS 1317914 1318861 . + 0 ID=cds-WP_012733946.1;Parent=gene-NIV78_RS22980;Dbxref=Genbank:WP_012733946.1;Name=WP_012733946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004206780.1;locus_tag=NIV78_RS22980;product=aldo/keto reductase;protein_id=WP_012733946.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1319465 1322425 . + . ID=gene-NIV78_RS22985;Name=NIV78_RS22985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22985 NZ_CP100137.1 Protein Homology CDS 1319465 1322425 . + 0 ID=cds-WP_100556376.1;Parent=gene-NIV78_RS22985;Dbxref=Genbank:WP_100556376.1;Name=WP_100556376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733945.1;locus_tag=NIV78_RS22985;product=bifunctional glycoside hydrolase 114/ polysaccharide deacetylase family protein;protein_id=WP_100556376.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1322400 1326575 . + . ID=gene-NIV78_RS22990;Name=NIV78_RS22990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22990 NZ_CP100137.1 Protein Homology CDS 1322400 1326575 . + 0 ID=cds-WP_251107841.1;Parent=gene-NIV78_RS22990;Dbxref=Genbank:WP_251107841.1;Name=WP_251107841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733944.1;locus_tag=NIV78_RS22990;product=tetratricopeptide repeat protein;protein_id=WP_251107841.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1326626 1327177 . + . ID=gene-NIV78_RS22995;Name=NIV78_RS22995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS22995 NZ_CP100137.1 Protein Homology CDS 1326626 1327177 . + 0 ID=cds-WP_017924016.1;Parent=gene-NIV78_RS22995;Dbxref=Genbank:WP_017924016.1;Name=WP_017924016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733943.1;locus_tag=NIV78_RS22995;product=hypothetical protein;protein_id=WP_017924016.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1327239 1328714 . + . ID=gene-NIV78_RS23000;Name=NIV78_RS23000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23000 NZ_CP100137.1 Protein Homology CDS 1327239 1328714 . + 0 ID=cds-WP_012733942.1;Parent=gene-NIV78_RS23000;Dbxref=Genbank:WP_012733942.1;Name=WP_012733942.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690259.1;locus_tag=NIV78_RS23000;product=GAF domain-containing protein;protein_id=WP_012733942.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1328701 1329906 . + . ID=gene-NIV78_RS23005;Name=NIV78_RS23005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23005 NZ_CP100137.1 Protein Homology CDS 1328701 1329906 . + 0 ID=cds-WP_251107842.1;Parent=gene-NIV78_RS23005;Dbxref=Genbank:WP_251107842.1;Name=WP_251107842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733941.1;locus_tag=NIV78_RS23005;product=sugar ABC transporter permease;protein_id=WP_251107842.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1329911 1331485 . + . ID=gene-NIV78_RS23010;Name=pelF;gbkey=Gene;gene=pelF;gene_biotype=protein_coding;locus_tag=NIV78_RS23010 NZ_CP100137.1 Protein Homology CDS 1329911 1331485 . + 0 ID=cds-WP_012733940.1;Parent=gene-NIV78_RS23010;Dbxref=Genbank:WP_012733940.1;Name=WP_012733940.1;Ontology_term=GO:0016757;gbkey=CDS;gene=pelF;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733940.1;locus_tag=NIV78_RS23010;product=GT4 family glycosyltransferase PelF;protein_id=WP_012733940.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1331501 1332871 . + . ID=gene-NIV78_RS23015;Name=pelG;gbkey=Gene;gene=pelG;gene_biotype=protein_coding;locus_tag=NIV78_RS23015 NZ_CP100137.1 Protein Homology CDS 1331501 1332871 . + 0 ID=cds-WP_012733939.1;Parent=gene-NIV78_RS23015;Dbxref=Genbank:WP_012733939.1;Name=WP_012733939.1;gbkey=CDS;gene=pelG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009241185.1;locus_tag=NIV78_RS23015;product=exopolysaccharide Pel transporter PelG;protein_id=WP_012733939.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1332964 1333734 . - . ID=gene-NIV78_RS23020;Name=NIV78_RS23020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23020 NZ_CP100137.1 Protein Homology CDS 1332964 1333734 . - 0 ID=cds-WP_012733938.1;Parent=gene-NIV78_RS23020;Dbxref=Genbank:WP_012733938.1;Name=WP_012733938.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899400.1;locus_tag=NIV78_RS23020;product=helix-turn-helix domain-containing protein;protein_id=WP_012733938.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1333777 1335081 . - . ID=gene-NIV78_RS23025;Name=shiA;gbkey=Gene;gene=shiA;gene_biotype=protein_coding;locus_tag=NIV78_RS23025 NZ_CP100137.1 Protein Homology CDS 1333777 1335081 . - 0 ID=cds-WP_017923442.1;Parent=gene-NIV78_RS23025;Dbxref=Genbank:WP_017923442.1;Name=WP_017923442.1;Ontology_term=GO:0055085,GO:0022857,GO:0016021;gbkey=CDS;gene=shiA;go_component=integral component of membrane|0016021||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733937.1;locus_tag=NIV78_RS23025;product=shikimate transporter;protein_id=WP_017923442.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1335511 1336638 . + . ID=gene-NIV78_RS23030;Name=NIV78_RS23030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23030 NZ_CP100137.1 Protein Homology CDS 1335511 1336638 . + 0 ID=cds-WP_012733936.1;Parent=gene-NIV78_RS23030;Dbxref=Genbank:WP_012733936.1;Name=WP_012733936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733936.1;locus_tag=NIV78_RS23030;product=VOC family protein;protein_id=WP_012733936.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1336849 1337493 . + . ID=gene-NIV78_RS23035;Name=NIV78_RS23035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23035 NZ_CP100137.1 Protein Homology CDS 1336849 1337493 . + 0 ID=cds-WP_100556378.1;Parent=gene-NIV78_RS23035;Dbxref=Genbank:WP_100556378.1;Name=WP_100556378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733935.1;locus_tag=NIV78_RS23035;product=DUF2239 family protein;protein_id=WP_100556378.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1337552 1338586 . - . ID=gene-NIV78_RS23040;Name=NIV78_RS23040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23040 NZ_CP100137.1 Protein Homology CDS 1337552 1338586 . - 0 ID=cds-WP_012733934.1;Parent=gene-NIV78_RS23040;Dbxref=Genbank:WP_012733934.1;Name=WP_012733934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690276.1;locus_tag=NIV78_RS23040;product=nucleoside hydrolase;protein_id=WP_012733934.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1339219 1340640 . - . ID=gene-NIV78_RS23045;Name=NIV78_RS23045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23045 NZ_CP100137.1 Protein Homology CDS 1339219 1340640 . - 0 ID=cds-WP_012733933.1;Parent=gene-NIV78_RS23045;Dbxref=Genbank:WP_012733933.1;Name=WP_012733933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019653234.1;locus_tag=NIV78_RS23045;product=PLP-dependent aminotransferase family protein;protein_id=WP_012733933.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1341647 1342081 . + . ID=gene-NIV78_RS23050;Name=NIV78_RS23050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23050 NZ_CP100137.1 Protein Homology CDS 1341647 1342081 . + 0 ID=cds-WP_017923084.1;Parent=gene-NIV78_RS23050;Dbxref=Genbank:WP_017923084.1;Name=WP_017923084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733932.1;locus_tag=NIV78_RS23050;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_017923084.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1342252 1343997 . + . ID=gene-NIV78_RS23055;Name=NIV78_RS23055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23055 NZ_CP100137.1 Protein Homology CDS 1342252 1343997 . + 0 ID=cds-WP_012733931.1;Parent=gene-NIV78_RS23055;Dbxref=Genbank:WP_012733931.1;Name=WP_012733931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733931.1;locus_tag=NIV78_RS23055;product=acyl--CoA ligase;protein_id=WP_012733931.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1344007 1344963 . + . ID=gene-NIV78_RS23060;Name=paaA;gbkey=Gene;gene=paaA;gene_biotype=protein_coding;locus_tag=NIV78_RS23060 NZ_CP100137.1 Protein Homology CDS 1344007 1344963 . + 0 ID=cds-WP_012733930.1;Parent=gene-NIV78_RS23060;Dbxref=Genbank:WP_012733930.1;Name=WP_012733930.1;Ontology_term=GO:0010124,GO:0097266;gbkey=CDS;gene=paaA;go_function=phenylacetyl-CoA 1%2C2-epoxidase activity|0097266||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733930.1;locus_tag=NIV78_RS23060;product=1%2C2-phenylacetyl-CoA epoxidase subunit A;protein_id=WP_012733930.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1344956 1345237 . + . ID=gene-NIV78_RS23065;Name=paaB;gbkey=Gene;gene=paaB;gene_biotype=protein_coding;locus_tag=NIV78_RS23065 NZ_CP100137.1 Protein Homology CDS 1344956 1345237 . + 0 ID=cds-WP_012733929.1;Parent=gene-NIV78_RS23065;Dbxref=Genbank:WP_012733929.1;Name=WP_012733929.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaB;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733929.1;locus_tag=NIV78_RS23065;product=1%2C2-phenylacetyl-CoA epoxidase subunit B;protein_id=WP_012733929.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1345234 1346004 . + . ID=gene-NIV78_RS23070;Name=paaC;gbkey=Gene;gene=paaC;gene_biotype=protein_coding;locus_tag=NIV78_RS23070 NZ_CP100137.1 Protein Homology CDS 1345234 1346004 . + 0 ID=cds-WP_017923085.1;Parent=gene-NIV78_RS23070;Dbxref=Genbank:WP_017923085.1;Name=WP_017923085.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaC;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733928.1;locus_tag=NIV78_RS23070;product=phenylacetate-CoA oxygenase subunit PaaC;protein_id=WP_017923085.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1345998 1346513 . + . ID=gene-NIV78_RS23075;Name=paaJ;gbkey=Gene;gene=paaJ;gene_biotype=protein_coding;locus_tag=NIV78_RS23075 NZ_CP100137.1 Protein Homology CDS 1345998 1346513 . + 0 ID=cds-WP_017923086.1;Parent=gene-NIV78_RS23075;Dbxref=Genbank:WP_017923086.1;Name=WP_017923086.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaJ;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733927.1;locus_tag=NIV78_RS23075;product=phenylacetate-CoA oxygenase subunit PaaJ;protein_id=WP_017923086.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1346539 1347600 . + . ID=gene-NIV78_RS23080;Name=NIV78_RS23080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23080 NZ_CP100137.1 Protein Homology CDS 1346539 1347600 . + 0 ID=cds-WP_153478855.1;Parent=gene-NIV78_RS23080;Dbxref=Genbank:WP_153478855.1;Name=WP_153478855.1;Ontology_term=GO:0009055,GO:0051536;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733926.1;locus_tag=NIV78_RS23080;product=2Fe-2S iron-sulfur cluster-binding protein;protein_id=WP_153478855.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1347691 1348866 . + . ID=gene-NIV78_RS23085;Name=NIV78_RS23085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23085 NZ_CP100137.1 Protein Homology CDS 1347691 1348866 . + 0 ID=cds-WP_012733925.1;Parent=gene-NIV78_RS23085;Dbxref=Genbank:WP_012733925.1;Name=WP_012733925.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733925.1;locus_tag=NIV78_RS23085;product=MFS transporter;protein_id=WP_012733925.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1348977 1349732 . + . ID=gene-NIV78_RS23090;Name=NIV78_RS23090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23090 NZ_CP100137.1 Protein Homology CDS 1348977 1349732 . + 0 ID=cds-WP_012733924.1;Parent=gene-NIV78_RS23090;Dbxref=Genbank:WP_012733924.1;Name=WP_012733924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733924.1;locus_tag=NIV78_RS23090;product=iron-containing redox enzyme family protein;protein_id=WP_012733924.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1349820 1351124 . + . ID=gene-NIV78_RS23095;Name=NIV78_RS23095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23095 NZ_CP100137.1 Protein Homology CDS 1349820 1351124 . + 0 ID=cds-WP_080630178.1;Parent=gene-NIV78_RS23095;Dbxref=Genbank:WP_080630178.1;Name=WP_080630178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010111927.1;locus_tag=NIV78_RS23095;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_080630178.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1351121 1352749 . + . ID=gene-NIV78_RS23100;Name=NIV78_RS23100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23100 NZ_CP100137.1 Protein Homology CDS 1351121 1352749 . + 0 ID=cds-WP_017923075.1;Parent=gene-NIV78_RS23100;Dbxref=Genbank:WP_017923075.1;Name=WP_017923075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733922.1;locus_tag=NIV78_RS23100;product=AMP-binding protein;protein_id=WP_017923075.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1352743 1354287 . + . ID=gene-NIV78_RS23105;Name=NIV78_RS23105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23105 NZ_CP100137.1 Protein Homology CDS 1352743 1354287 . + 0 ID=cds-WP_017923074.1;Parent=gene-NIV78_RS23105;Dbxref=Genbank:WP_017923074.1;Name=WP_017923074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733921.1;locus_tag=NIV78_RS23105;product=chorismate-binding protein;protein_id=WP_017923074.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1354278 1354886 . + . ID=gene-NIV78_RS23110;Name=NIV78_RS23110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23110 NZ_CP100137.1 Protein Homology CDS 1354278 1354886 . + 0 ID=cds-WP_012733920.1;Parent=gene-NIV78_RS23110;Dbxref=Genbank:WP_012733920.1;Name=WP_012733920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733920.1;locus_tag=NIV78_RS23110;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=WP_012733920.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1354911 1355345 . + . ID=gene-NIV78_RS23115;Name=NIV78_RS23115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23115 NZ_CP100137.1 Protein Homology CDS 1354911 1355345 . + 0 ID=cds-WP_012733919.1;Parent=gene-NIV78_RS23115;Dbxref=Genbank:WP_012733919.1;Name=WP_012733919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733919.1;locus_tag=NIV78_RS23115;product=acyl-CoA thioesterase;protein_id=WP_012733919.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1355342 1355734 . + . ID=gene-NIV78_RS23120;Name=NIV78_RS23120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23120 NZ_CP100137.1 Protein Homology CDS 1355342 1355734 . + 0 ID=cds-WP_012733918.1;Parent=gene-NIV78_RS23120;Dbxref=Genbank:WP_012733918.1;Name=WP_012733918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733918.1;locus_tag=NIV78_RS23120;product=RidA family protein;protein_id=WP_012733918.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1355893 1356795 . + . ID=gene-NIV78_RS23125;Name=NIV78_RS23125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23125 NZ_CP100137.1 Protein Homology CDS 1355893 1356795 . + 0 ID=cds-WP_085967292.1;Parent=gene-NIV78_RS23125;Dbxref=Genbank:WP_085967292.1;Name=WP_085967292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733917.1;locus_tag=NIV78_RS23125;product=TauD/TfdA family dioxygenase;protein_id=WP_085967292.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1356942 1357997 . + . ID=gene-NIV78_RS23130;Name=NIV78_RS23130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23130 NZ_CP100137.1 Protein Homology CDS 1356942 1357997 . + 0 ID=cds-WP_257758036.1;Parent=gene-NIV78_RS23130;Dbxref=Genbank:WP_257758036.1;Name=WP_257758036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733916.1;locus_tag=NIV78_RS23130;product=ABC transporter substrate-binding protein;protein_id=WP_257758036.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1358106 1359032 . + . ID=gene-NIV78_RS23135;Name=NIV78_RS23135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23135 NZ_CP100137.1 Protein Homology CDS 1358106 1359032 . + 0 ID=cds-WP_017924437.1;Parent=gene-NIV78_RS23135;Dbxref=Genbank:WP_017924437.1;Name=WP_017924437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733915.1;locus_tag=NIV78_RS23135;product=ABC transporter ATP-binding protein;protein_id=WP_017924437.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1359029 1359904 . + . ID=gene-NIV78_RS23140;Name=NIV78_RS23140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23140 NZ_CP100137.1 Protein Homology CDS 1359029 1359904 . + 0 ID=cds-WP_012733914.1;Parent=gene-NIV78_RS23140;Dbxref=Genbank:WP_012733914.1;Name=WP_012733914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733914.1;locus_tag=NIV78_RS23140;product=ABC transporter permease;protein_id=WP_012733914.1;transl_table=11 NZ_CP100137.1 cmsearch riboswitch 1360002 1360159 . + . ID=id-NZ_CP100137.1:1360002..1360159;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP100137.1 RefSeq gene 1360230 1360751 . + . ID=gene-NIV78_RS23145;Name=NIV78_RS23145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23145 NZ_CP100137.1 Protein Homology CDS 1360230 1360751 . + 0 ID=cds-WP_017924591.1;Parent=gene-NIV78_RS23145;Dbxref=Genbank:WP_017924591.1;Name=WP_017924591.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733912.1;locus_tag=NIV78_RS23145;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_017924591.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1360818 1362194 . - . ID=gene-NIV78_RS23150;Name=NIV78_RS23150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23150 NZ_CP100137.1 Protein Homology CDS 1360818 1362194 . - 0 ID=cds-WP_012733911.1;Parent=gene-NIV78_RS23150;Dbxref=Genbank:WP_012733911.1;Name=WP_012733911.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690305.1;locus_tag=NIV78_RS23150;product=amino acid permease;protein_id=WP_012733911.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1362805 1363104 . + . ID=gene-NIV78_RS23155;Name=NIV78_RS23155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23155 NZ_CP100137.1 Protein Homology CDS 1362805 1363104 . + 0 ID=cds-WP_017924295.1;Parent=gene-NIV78_RS23155;Dbxref=Genbank:WP_017924295.1;Name=WP_017924295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690306.1;locus_tag=NIV78_RS23155;product=DUF3649 domain-containing protein;protein_id=WP_017924295.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1363101 1364732 . + . ID=gene-NIV78_RS23160;Name=NIV78_RS23160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23160 NZ_CP100137.1 Protein Homology CDS 1363101 1364732 . + 0 ID=cds-WP_251107845.1;Parent=gene-NIV78_RS23160;Dbxref=Genbank:WP_251107845.1;Name=WP_251107845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012202211.1;locus_tag=NIV78_RS23160;product=PepSY domain-containing protein;protein_id=WP_251107845.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1364734 1365081 . + . ID=gene-NIV78_RS23165;Name=NIV78_RS23165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23165 NZ_CP100137.1 Protein Homology CDS 1364734 1365081 . + 0 ID=cds-WP_100556382.1;Parent=gene-NIV78_RS23165;Dbxref=Genbank:WP_100556382.1;Name=WP_100556382.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023232.2;locus_tag=NIV78_RS23165;product=DUF3325 domain-containing protein;protein_id=WP_100556382.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1365078 1365461 . + . ID=gene-NIV78_RS23170;Name=NIV78_RS23170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23170 NZ_CP100137.1 Protein Homology CDS 1365078 1365461 . + 0 ID=cds-WP_012733908.1;Parent=gene-NIV78_RS23170;Dbxref=Genbank:WP_012733908.1;Name=WP_012733908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403790.1;locus_tag=NIV78_RS23170;product=hypothetical protein;protein_id=WP_012733908.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1365492 1366217 . - . ID=gene-NIV78_RS23175;Name=NIV78_RS23175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23175 NZ_CP100137.1 Protein Homology CDS 1365492 1366217 . - 0 ID=cds-WP_017425154.1;Parent=gene-NIV78_RS23175;Dbxref=Genbank:WP_017425154.1;Name=WP_017425154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425154.1;locus_tag=NIV78_RS23175;product=TetR/AcrR family transcriptional regulator;protein_id=WP_017425154.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1366448 1367626 . + . ID=gene-NIV78_RS23180;Name=NIV78_RS23180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23180 NZ_CP100137.1 Protein Homology CDS 1366448 1367626 . + 0 ID=cds-WP_012733906.1;Parent=gene-NIV78_RS23180;Dbxref=Genbank:WP_012733906.1;Name=WP_012733906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690311.1;locus_tag=NIV78_RS23180;product=isovaleryl-CoA dehydrogenase;protein_id=WP_012733906.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1367648 1369255 . + . ID=gene-NIV78_RS23185;Name=NIV78_RS23185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23185 NZ_CP100137.1 Protein Homology CDS 1367648 1369255 . + 0 ID=cds-WP_017923811.1;Parent=gene-NIV78_RS23185;Dbxref=Genbank:WP_017923811.1;Name=WP_017923811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690312.1;locus_tag=NIV78_RS23185;product=methylcrotonoyl-CoA carboxylase;protein_id=WP_017923811.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1369266 1370063 . + . ID=gene-NIV78_RS23190;Name=NIV78_RS23190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23190 NZ_CP100137.1 Protein Homology CDS 1369266 1370063 . + 0 ID=cds-WP_251107846.1;Parent=gene-NIV78_RS23190;Dbxref=Genbank:WP_251107846.1;Name=WP_251107846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733904.1;locus_tag=NIV78_RS23190;product=enoyl-CoA hydratase-related protein;protein_id=WP_251107846.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1370169 1372196 . + . ID=gene-NIV78_RS23195;Name=NIV78_RS23195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23195 NZ_CP100137.1 Protein Homology CDS 1370169 1372196 . + 0 ID=cds-WP_012733903.1;Parent=gene-NIV78_RS23195;Dbxref=Genbank:WP_012733903.1;Name=WP_012733903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690314.1;locus_tag=NIV78_RS23195;product=acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha;protein_id=WP_012733903.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1372719 1374017 . + . ID=gene-NIV78_RS23200;Name=NIV78_RS23200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23200 NZ_CP100137.1 Protein Homology CDS 1372719 1374017 . + 0 ID=cds-WP_012733902.1;Parent=gene-NIV78_RS23200;Dbxref=Genbank:WP_012733902.1;Name=WP_012733902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523796.1;locus_tag=NIV78_RS23200;product=MASE1 domain-containing protein;protein_id=WP_012733902.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1374034 1374885 . + . ID=gene-NIV78_RS23205;Name=NIV78_RS23205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23205 NZ_CP100137.1 Protein Homology CDS 1374034 1374885 . + 0 ID=cds-WP_012733901.1;Parent=gene-NIV78_RS23205;Dbxref=Genbank:WP_012733901.1;Name=WP_012733901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733901.1;locus_tag=NIV78_RS23205;product=alpha/beta fold hydrolase;protein_id=WP_012733901.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1375102 1377369 . + . ID=gene-NIV78_RS23210;Name=NIV78_RS23210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23210 NZ_CP100137.1 Protein Homology CDS 1375102 1377369 . + 0 ID=cds-WP_257758038.1;Parent=gene-NIV78_RS23210;Dbxref=Genbank:WP_257758038.1;Name=WP_257758038.1;Ontology_term=GO:0015891,GO:0015343,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=siderophore transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733900.1;locus_tag=NIV78_RS23210;product=TonB-dependent siderophore receptor;protein_id=WP_257758038.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1377404 1378015 . + . ID=gene-NIV78_RS23215;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=NIV78_RS23215 NZ_CP100137.1 Protein Homology CDS 1377404 1378015 . + 0 ID=cds-WP_251107848.1;Parent=gene-NIV78_RS23215;Dbxref=Genbank:WP_251107848.1;Name=WP_251107848.1;Ontology_term=GO:0015890,GO:0015663,GO:0016021;gbkey=CDS;gene=pnuC;go_component=integral component of membrane|0016021||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425132.1;locus_tag=NIV78_RS23215;product=nicotinamide riboside transporter PnuC;protein_id=WP_251107848.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1378042 1379268 . + . ID=gene-NIV78_RS23220;Name=NIV78_RS23220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23220 NZ_CP100137.1 Protein Homology CDS 1378042 1379268 . + 0 ID=cds-WP_232734594.1;Parent=gene-NIV78_RS23220;Dbxref=Genbank:WP_232734594.1;Name=WP_232734594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733898.1;locus_tag=NIV78_RS23220;product=phosphotransferase;protein_id=WP_232734594.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1379561 1381120 . + . ID=gene-NIV78_RS23225;Name=NIV78_RS23225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23225 NZ_CP100137.1 Protein Homology CDS 1379561 1381120 . + 0 ID=cds-WP_017923968.1;Parent=gene-NIV78_RS23225;Dbxref=Genbank:WP_017923968.1;Name=WP_017923968.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216630.1;locus_tag=NIV78_RS23225;product=methyl-accepting chemotaxis protein;protein_id=WP_017923968.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1381213 1382100 . - . ID=gene-NIV78_RS23230;Name=NIV78_RS23230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23230 NZ_CP100137.1 Protein Homology CDS 1381213 1382100 . - 0 ID=cds-WP_241766942.1;Parent=gene-NIV78_RS23230;Dbxref=Genbank:WP_241766942.1;Name=WP_241766942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733897.1;locus_tag=NIV78_RS23230;product=putative DNA-binding domain-containing protein;protein_id=WP_241766942.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1382093 1383106 . - . ID=gene-NIV78_RS23235;Name=NIV78_RS23235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23235 NZ_CP100137.1 Protein Homology CDS 1382093 1383106 . - 0 ID=cds-WP_124837307.1;Parent=gene-NIV78_RS23235;Dbxref=Genbank:WP_124837307.1;Name=WP_124837307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424900.1;locus_tag=NIV78_RS23235;product=DUF692 domain-containing protein;protein_id=WP_124837307.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1383118 1385241 . - . ID=gene-NIV78_RS23240;Name=NIV78_RS23240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23240 NZ_CP100137.1 Protein Homology CDS 1383118 1385241 . - 0 ID=cds-WP_012733895.1;Parent=gene-NIV78_RS23240;Dbxref=Genbank:WP_012733895.1;Name=WP_012733895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733895.1;locus_tag=NIV78_RS23240;product=hypothetical protein;protein_id=WP_012733895.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1385395 1385880 . - . ID=gene-NIV78_RS23245;Name=NIV78_RS23245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23245 NZ_CP100137.1 GeneMarkS-2+ CDS 1385395 1385880 . - 0 ID=cds-WP_127913901.1;Parent=gene-NIV78_RS23245;Dbxref=Genbank:WP_127913901.1;Name=WP_127913901.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS23245;product=hypothetical protein;protein_id=WP_127913901.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1385895 1387259 . + . ID=gene-NIV78_RS23250;Name=NIV78_RS23250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23250 NZ_CP100137.1 Protein Homology CDS 1385895 1387259 . + 0 ID=cds-WP_241766810.1;Parent=gene-NIV78_RS23250;Dbxref=Genbank:WP_241766810.1;Name=WP_241766810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733894.1;locus_tag=NIV78_RS23250;product=DUF2252 family protein;protein_id=WP_241766810.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1387337 1387843 . - . ID=gene-NIV78_RS23255;Name=NIV78_RS23255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23255 NZ_CP100137.1 Protein Homology CDS 1387337 1387843 . - 0 ID=cds-WP_012733893.1;Parent=gene-NIV78_RS23255;Dbxref=Genbank:WP_012733893.1;Name=WP_012733893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733893.1;locus_tag=NIV78_RS23255;product=hypothetical protein;protein_id=WP_012733893.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1388087 1388515 . - . ID=gene-NIV78_RS23260;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=NIV78_RS23260 NZ_CP100137.1 Protein Homology CDS 1388087 1388515 . - 0 ID=cds-WP_012733892.1;Parent=gene-NIV78_RS23260;Dbxref=Genbank:WP_012733892.1;Name=WP_012733892.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssE;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733892.1;locus_tag=NIV78_RS23260;product=type VI secretion system baseplate subunit TssE;protein_id=WP_012733892.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1388529 1391237 . - . ID=gene-NIV78_RS23265;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;locus_tag=NIV78_RS23265 NZ_CP100137.1 Protein Homology CDS 1388529 1391237 . - 0 ID=cds-WP_017922863.1;Parent=gene-NIV78_RS23265;Dbxref=Genbank:WP_017922863.1;Name=WP_017922863.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733891.1;locus_tag=NIV78_RS23265;product=type VI secretion system ATPase TssH;protein_id=WP_017922863.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1391375 1391860 . - . ID=gene-NIV78_RS23270;Name=NIV78_RS23270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23270 NZ_CP100137.1 Protein Homology CDS 1391375 1391860 . - 0 ID=cds-WP_012733890.1;Parent=gene-NIV78_RS23270;Dbxref=Genbank:WP_012733890.1;Name=WP_012733890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007587801.1;locus_tag=NIV78_RS23270;product=Hcp family type VI secretion system effector;protein_id=WP_012733890.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1391957 1393765 . - . ID=gene-NIV78_RS23275;Name=NIV78_RS23275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23275 NZ_CP100137.1 Protein Homology CDS 1391957 1393765 . - 0 ID=cds-WP_017922864.1;Parent=gene-NIV78_RS23275;Dbxref=Genbank:WP_017922864.1;Name=WP_017922864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733889.1;locus_tag=NIV78_RS23275;product=OmpA family protein;protein_id=WP_017922864.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1393762 1394493 . - . ID=gene-NIV78_RS23280;Name=NIV78_RS23280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23280 NZ_CP100137.1 Protein Homology CDS 1393762 1394493 . - 0 ID=cds-WP_012733888.1;Parent=gene-NIV78_RS23280;Dbxref=Genbank:WP_012733888.1;Name=WP_012733888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733888.1;locus_tag=NIV78_RS23280;product=DotU family type IV/VI secretion system protein;protein_id=WP_012733888.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1394490 1395842 . - . ID=gene-NIV78_RS23285;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=NIV78_RS23285 NZ_CP100137.1 Protein Homology CDS 1394490 1395842 . - 0 ID=cds-WP_012733887.1;Parent=gene-NIV78_RS23285;Dbxref=Genbank:WP_012733887.1;Name=WP_012733887.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssK;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765961.1;locus_tag=NIV78_RS23285;product=type VI secretion system baseplate subunit TssK;protein_id=WP_012733887.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1396338 1396850 . + . ID=gene-NIV78_RS23290;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=NIV78_RS23290 NZ_CP100137.1 Protein Homology CDS 1396338 1396850 . + 0 ID=cds-WP_012733886.1;Parent=gene-NIV78_RS23290;Dbxref=Genbank:WP_012733886.1;Name=WP_012733886.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssB;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018434326.1;locus_tag=NIV78_RS23290;product=type VI secretion system contractile sheath small subunit;protein_id=WP_012733886.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1396893 1398425 . + . ID=gene-NIV78_RS23295;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=NIV78_RS23295 NZ_CP100137.1 Protein Homology CDS 1396893 1398425 . + 0 ID=cds-WP_012733885.1;Parent=gene-NIV78_RS23295;Dbxref=Genbank:WP_012733885.1;Name=WP_012733885.1;Ontology_term=GO:0033103,GO:0003674,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733082.1;locus_tag=NIV78_RS23295;product=type VI secretion system contractile sheath large subunit;protein_id=WP_012733885.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1398523 1401000 . + . ID=gene-NIV78_RS23300;Name=vgrG;gbkey=Gene;gene=vgrG;gene_biotype=protein_coding;locus_tag=NIV78_RS23300 NZ_CP100137.1 Protein Homology CDS 1398523 1401000 . + 0 ID=cds-WP_257758040.1;Parent=gene-NIV78_RS23300;Dbxref=Genbank:WP_257758040.1;Name=WP_257758040.1;gbkey=CDS;gene=vgrG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423317.1;locus_tag=NIV78_RS23300;product=type VI secretion system tip protein VgrG;protein_id=WP_257758040.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1401058 1402623 . + . ID=gene-NIV78_RS23305;Name=NIV78_RS23305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23305 NZ_CP100137.1 Protein Homology CDS 1401058 1402623 . + 0 ID=cds-WP_257758048.1;Parent=gene-NIV78_RS23305;Dbxref=Genbank:WP_257758048.1;Name=WP_257758048.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014503.2;locus_tag=NIV78_RS23305;product=hypothetical protein;protein_id=WP_257758048.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1402620 1403690 . + . ID=gene-NIV78_RS23310;Name=NIV78_RS23310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23310 NZ_CP100137.1 Protein Homology CDS 1402620 1403690 . + 0 ID=cds-WP_257758054.1;Parent=gene-NIV78_RS23310;Dbxref=Genbank:WP_257758054.1;Name=WP_257758054.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037813.2;locus_tag=NIV78_RS23310;product=T6SS immunity protein Tli4 family protein;protein_id=WP_257758054.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1403701 1404168 . + . ID=gene-NIV78_RS23315;Name=NIV78_RS23315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23315 NZ_CP100137.1 GeneMarkS-2+ CDS 1403701 1404168 . + 0 ID=cds-WP_257758055.1;Parent=gene-NIV78_RS23315;Dbxref=Genbank:WP_257758055.1;Name=WP_257758055.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS23315;product=hypothetical protein;protein_id=WP_257758055.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1404251 1405219 . + . ID=gene-NIV78_RS23320;Name=NIV78_RS23320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23320 NZ_CP100137.1 Protein Homology CDS 1404251 1405219 . + 0 ID=cds-WP_257758056.1;Parent=gene-NIV78_RS23320;Dbxref=Genbank:WP_257758056.1;Name=WP_257758056.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037813.2;locus_tag=NIV78_RS23320;product=T6SS immunity protein Tli4 family protein;protein_id=WP_257758056.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1405230 1405697 . + . ID=gene-NIV78_RS23325;Name=NIV78_RS23325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23325 NZ_CP100137.1 GeneMarkS-2+ CDS 1405230 1405697 . + 0 ID=cds-WP_257757425.1;Parent=gene-NIV78_RS23325;Dbxref=Genbank:WP_257757425.1;Name=WP_257757425.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS23325;product=hypothetical protein;protein_id=WP_257757425.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1405855 1406874 . + . ID=gene-NIV78_RS23330;Name=NIV78_RS23330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23330 NZ_CP100137.1 Protein Homology CDS 1405855 1406874 . + 0 ID=cds-WP_257757427.1;Parent=gene-NIV78_RS23330;Dbxref=Genbank:WP_257757427.1;Name=WP_257757427.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014503.2;locus_tag=NIV78_RS23330;product=hypothetical protein;protein_id=WP_257757427.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1406767 1407584 . - . ID=gene-NIV78_RS23335;Name=NIV78_RS23335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23335 NZ_CP100137.1 Protein Homology CDS 1407236 1407584 . - 0 ID=cds-WP_085962451.1-5;Parent=gene-NIV78_RS23335;Dbxref=Genbank:WP_085962451.1;Name=WP_085962451.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS23335;product=IS5 family transposase;protein_id=WP_085962451.1;transl_table=11 NZ_CP100137.1 Protein Homology CDS 1406767 1407236 . - 2 ID=cds-WP_085962451.1-5;Parent=gene-NIV78_RS23335;Dbxref=Genbank:WP_085962451.1;Name=WP_085962451.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS23335;product=IS5 family transposase;protein_id=WP_085962451.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1407678 1408340 . + . ID=gene-NIV78_RS23340;Name=NIV78_RS23340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23340 NZ_CP100137.1 GeneMarkS-2+ CDS 1407678 1408340 . + 0 ID=cds-WP_257757429.1;Parent=gene-NIV78_RS23340;Dbxref=Genbank:WP_257757429.1;Name=WP_257757429.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS23340;product=hypothetical protein;protein_id=WP_257757429.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1408337 1409434 . + . ID=gene-NIV78_RS23345;Name=NIV78_RS23345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23345 NZ_CP100137.1 Protein Homology CDS 1408337 1409434 . + 0 ID=cds-WP_251107849.1;Parent=gene-NIV78_RS23345;Dbxref=Genbank:WP_251107849.1;Name=WP_251107849.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037813.2;locus_tag=NIV78_RS23345;product=T6SS immunity protein Tli4 family protein;protein_id=WP_251107849.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1409445 1410701 . + . ID=gene-NIV78_RS23350;Name=NIV78_RS23350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23350 NZ_CP100137.1 GeneMarkS-2+ CDS 1409445 1410701 . + 0 ID=cds-WP_251107850.1;Parent=gene-NIV78_RS23350;Dbxref=Genbank:WP_251107850.1;Name=WP_251107850.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS23350;product=hypothetical protein;protein_id=WP_251107850.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1410784 1411074 . + . ID=gene-NIV78_RS23355;Name=NIV78_RS23355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23355 NZ_CP100137.1 Protein Homology CDS 1410784 1411074 . + 0 ID=cds-WP_232734609.1;Parent=gene-NIV78_RS23355;Dbxref=Genbank:WP_232734609.1;Name=WP_232734609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006029250.1;locus_tag=NIV78_RS23355;product=PAAR domain-containing protein;protein_id=WP_232734609.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1411174 1414692 . + . ID=gene-NIV78_RS23360;Name=NIV78_RS23360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23360 NZ_CP100137.1 Protein Homology CDS 1411174 1414692 . + 0 ID=cds-WP_257757430.1;Parent=gene-NIV78_RS23360;Dbxref=Genbank:WP_257757430.1;Name=WP_257757430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733090.1;locus_tag=NIV78_RS23360;product=type VI secretion protein VasK;protein_id=WP_257757430.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1414689 1416275 . + . ID=gene-NIV78_RS23365;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=NIV78_RS23365 NZ_CP100137.1 Protein Homology CDS 1414689 1416275 . + 0 ID=cds-WP_257757431.1;Parent=gene-NIV78_RS23365;Dbxref=Genbank:WP_257757431.1;Name=WP_257757431.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424034.1;locus_tag=NIV78_RS23365;product=type VI secretion system protein TssA;protein_id=WP_257757431.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1416288 1418102 . + . ID=gene-NIV78_RS23370;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=NIV78_RS23370 NZ_CP100137.1 Protein Homology CDS 1416288 1418102 . + 0 ID=cds-WP_251107852.1;Parent=gene-NIV78_RS23370;Dbxref=Genbank:WP_251107852.1;Name=WP_251107852.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssF;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750258.1;locus_tag=NIV78_RS23370;product=type VI secretion system baseplate subunit TssF;protein_id=WP_251107852.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1418099 1419220 . + . ID=gene-NIV78_RS23375;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=NIV78_RS23375 NZ_CP100137.1 Protein Homology CDS 1418099 1419220 . + 0 ID=cds-WP_012733876.1;Parent=gene-NIV78_RS23375;Dbxref=Genbank:WP_012733876.1;Name=WP_012733876.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733876.1;locus_tag=NIV78_RS23375;product=type VI secretion system baseplate subunit TssG;protein_id=WP_012733876.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1419369 1419926 . + . ID=gene-NIV78_RS23380;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=NIV78_RS23380 NZ_CP100137.1 Protein Homology CDS 1419369 1419926 . + 0 ID=cds-WP_012733875.1;Parent=gene-NIV78_RS23380;Dbxref=Genbank:WP_012733875.1;Name=WP_012733875.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssJ;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733875.1;locus_tag=NIV78_RS23380;product=type VI secretion system lipoprotein TssJ;protein_id=WP_012733875.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1420119 1421585 . - . ID=gene-NIV78_RS23385;Name=NIV78_RS23385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23385 NZ_CP100137.1 Protein Homology CDS 1420119 1421585 . - 0 ID=cds-WP_198292469.1-2;Parent=gene-NIV78_RS23385;Dbxref=Genbank:WP_198292469.1;Name=WP_198292469.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763800.1;locus_tag=NIV78_RS23385;product=ISNCY family transposase;protein_id=WP_198292469.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1421744 1421908 . - . ID=gene-NIV78_RS23390;Name=NIV78_RS23390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23390 NZ_CP100137.1 GeneMarkS-2+ CDS 1421744 1421908 . - 0 ID=cds-WP_157384244.1;Parent=gene-NIV78_RS23390;Dbxref=Genbank:WP_157384244.1;Name=WP_157384244.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS23390;product=hypothetical protein;protein_id=WP_157384244.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1421921 1423024 . - . ID=gene-NIV78_RS23395;Name=NIV78_RS23395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23395 NZ_CP100137.1 GeneMarkS-2+ CDS 1421921 1423024 . - 0 ID=cds-WP_251107881.1;Parent=gene-NIV78_RS23395;Dbxref=Genbank:WP_251107881.1;Name=WP_251107881.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS23395;product=hypothetical protein;protein_id=WP_251107881.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1423442 1424599 . + . ID=gene-NIV78_RS23400;Name=NIV78_RS23400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23400 NZ_CP100137.1 Protein Homology CDS 1423442 1424599 . + 0 ID=cds-WP_017924695.1;Parent=gene-NIV78_RS23400;Dbxref=Genbank:WP_017924695.1;Name=WP_017924695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733874.1;locus_tag=NIV78_RS23400;product=zinc-binding dehydrogenase;protein_id=WP_017924695.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1424992 1425627 . + . ID=gene-NIV78_RS23405;Name=NIV78_RS23405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23405 NZ_CP100137.1 Protein Homology CDS 1424992 1425627 . + 0 ID=cds-WP_012733873.1;Parent=gene-NIV78_RS23405;Dbxref=Genbank:WP_012733873.1;Name=WP_012733873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733873.1;locus_tag=NIV78_RS23405;product=HAD hydrolase-like protein;protein_id=WP_012733873.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1425735 1426520 . + . ID=gene-NIV78_RS23410;Name=NIV78_RS23410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23410 NZ_CP100137.1 Protein Homology CDS 1425735 1426520 . + 0 ID=cds-WP_012733872.1;Parent=gene-NIV78_RS23410;Dbxref=Genbank:WP_012733872.1;Name=WP_012733872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733872.1;locus_tag=NIV78_RS23410;product=aldolase;protein_id=WP_012733872.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1426571 1426909 . - . ID=gene-NIV78_RS23415;Name=NIV78_RS23415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23415 NZ_CP100137.1 Protein Homology CDS 1426571 1426909 . - 0 ID=cds-WP_017923999.1;Parent=gene-NIV78_RS23415;Dbxref=Genbank:WP_017923999.1;Name=WP_017923999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733871.1;locus_tag=NIV78_RS23415;product=hypothetical protein;protein_id=WP_017923999.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1427072 1427602 . - . ID=gene-NIV78_RS23420;Name=NIV78_RS23420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23420 NZ_CP100137.1 Protein Homology CDS 1427072 1427602 . - 0 ID=cds-WP_012733870.1;Parent=gene-NIV78_RS23420;Dbxref=Genbank:WP_012733870.1;Name=WP_012733870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733870.1;locus_tag=NIV78_RS23420;product=hypothetical protein;protein_id=WP_012733870.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1427589 1429400 . - . ID=gene-NIV78_RS23425;Name=NIV78_RS23425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23425 NZ_CP100137.1 Protein Homology CDS 1427589 1429400 . - 0 ID=cds-WP_012733869.1;Parent=gene-NIV78_RS23425;Dbxref=Genbank:WP_012733869.1;Name=WP_012733869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733869.1;locus_tag=NIV78_RS23425;product=TIGR02594 family protein;protein_id=WP_012733869.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1429438 1429989 . - . ID=gene-NIV78_RS23430;Name=NIV78_RS23430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23430 NZ_CP100137.1 Protein Homology CDS 1429438 1429989 . - 0 ID=cds-WP_017424560.1;Parent=gene-NIV78_RS23430;Dbxref=Genbank:WP_017424560.1;Name=WP_017424560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424560.1;locus_tag=NIV78_RS23430;product=hypothetical protein;protein_id=WP_017424560.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1429993 1433046 . - . ID=gene-NIV78_RS23435;Name=NIV78_RS23435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23435 NZ_CP100137.1 Protein Homology CDS 1429993 1433046 . - 0 ID=cds-WP_017424561.1;Parent=gene-NIV78_RS23435;Dbxref=Genbank:WP_017424561.1;Name=WP_017424561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424561.1;locus_tag=NIV78_RS23435;product=type VI secretion system tip protein VgrG;protein_id=WP_017424561.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1433278 1433727 . + . ID=gene-NIV78_RS23440;Name=NIV78_RS23440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23440 NZ_CP100137.1 GeneMarkS-2+ CDS 1433278 1433727 . + 0 ID=cds-WP_153478820.1;Parent=gene-NIV78_RS23440;Dbxref=Genbank:WP_153478820.1;Name=WP_153478820.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS23440;product=hypothetical protein;protein_id=WP_153478820.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1433739 1434764 . - . ID=gene-NIV78_RS23445;Name=NIV78_RS23445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23445 NZ_CP100137.1 Protein Homology CDS 1433739 1434764 . - 0 ID=cds-WP_012733867.1;Parent=gene-NIV78_RS23445;Dbxref=Genbank:WP_012733867.1;Name=WP_012733867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008922272.1;locus_tag=NIV78_RS23445;product=aldo/keto reductase;protein_id=WP_012733867.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1435313 1436737 . - . ID=gene-NIV78_RS23450;Name=NIV78_RS23450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23450 NZ_CP100137.1 Protein Homology CDS 1435313 1436737 . - 0 ID=cds-WP_017923101.1;Parent=gene-NIV78_RS23450;Dbxref=Genbank:WP_017923101.1;Name=WP_017923101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733866.1;locus_tag=NIV78_RS23450;product=hypothetical protein;protein_id=WP_017923101.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1437108 1437926 . - . ID=gene-NIV78_RS23455;Name=NIV78_RS23455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23455 NZ_CP100137.1 Protein Homology CDS 1437108 1437926 . - 0 ID=cds-WP_017432528.1;Parent=gene-NIV78_RS23455;Dbxref=Genbank:WP_017432528.1;Name=WP_017432528.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424565.1;locus_tag=NIV78_RS23455;product=FkbM family methyltransferase;protein_id=WP_017432528.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1438034 1439017 . - . ID=gene-NIV78_RS23460;Name=NIV78_RS23460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23460 NZ_CP100137.1 Protein Homology CDS 1438034 1439017 . - 0 ID=cds-WP_012733865.1;Parent=gene-NIV78_RS23460;Dbxref=Genbank:WP_012733865.1;Name=WP_012733865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690389.1;locus_tag=NIV78_RS23460;product=aldo/keto reductase;protein_id=WP_012733865.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1439293 1439646 . + . ID=gene-NIV78_RS23465;Name=NIV78_RS23465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23465 NZ_CP100137.1 Protein Homology CDS 1439293 1439646 . + 0 ID=cds-WP_026051627.1;Parent=gene-NIV78_RS23465;Dbxref=Genbank:WP_026051627.1;Name=WP_026051627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690396.1;locus_tag=NIV78_RS23465;product=DUF1304 domain-containing protein;protein_id=WP_026051627.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1439833 1441164 . - . ID=gene-NIV78_RS23470;Name=NIV78_RS23470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23470 NZ_CP100137.1 Protein Homology CDS 1439833 1441164 . - 0 ID=cds-WP_043225272.1;Parent=gene-NIV78_RS23470;Dbxref=Genbank:WP_043225272.1;Name=WP_043225272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733863.1;locus_tag=NIV78_RS23470;product=leucine-rich repeat-containing serine/threonine-protein kinase;protein_id=WP_043225272.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1441448 1443484 . + . ID=gene-NIV78_RS23475;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=NIV78_RS23475 NZ_CP100137.1 Protein Homology CDS 1441448 1443484 . + 0 ID=cds-WP_017922826.1;Parent=gene-NIV78_RS23475;Dbxref=Genbank:WP_017922826.1;Name=WP_017922826.1;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733862.1;locus_tag=NIV78_RS23475;product=transketolase;protein_id=WP_017922826.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1444076 1444465 . + . ID=gene-NIV78_RS23480;Name=NIV78_RS23480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23480 NZ_CP100137.1 Protein Homology CDS 1444076 1444465 . + 0 ID=cds-WP_257758074.1;Parent=gene-NIV78_RS23480;Dbxref=Genbank:WP_257758074.1;Name=WP_257758074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733861.1;locus_tag=NIV78_RS23480;product=DUF1924 domain-containing protein;protein_id=WP_257758074.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1444512 1444997 . + . ID=gene-NIV78_RS23485;Name=NIV78_RS23485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23485 NZ_CP100137.1 Protein Homology CDS 1444512 1444997 . + 0 ID=cds-WP_012733860.1;Parent=gene-NIV78_RS23485;Dbxref=Genbank:WP_012733860.1;Name=WP_012733860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733860.1;locus_tag=NIV78_RS23485;product=diheme cytochrome c;protein_id=WP_012733860.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1444969 1445700 . + . ID=gene-NIV78_RS23490;Name=NIV78_RS23490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23490 NZ_CP100137.1 Protein Homology CDS 1444969 1445700 . + 0 ID=cds-WP_035980290.1;Parent=gene-NIV78_RS23490;Dbxref=Genbank:WP_035980290.1;Name=WP_035980290.1;Ontology_term=GO:0009055,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013588283.1;locus_tag=NIV78_RS23490;product=cytochrome b/b6 domain-containing protein;protein_id=WP_035980290.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1445758 1448049 . + . ID=gene-NIV78_RS23495;Name=NIV78_RS23495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23495 NZ_CP100137.1 Protein Homology CDS 1445758 1448049 . + 0 ID=cds-WP_251107938.1;Parent=gene-NIV78_RS23495;Dbxref=Genbank:WP_251107938.1;Name=WP_251107938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880351.1;locus_tag=NIV78_RS23495;product=heavy metal translocating P-type ATPase;protein_id=WP_251107938.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1448219 1449331 . - . ID=gene-NIV78_RS23500;Name=NIV78_RS23500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23500 NZ_CP100137.1 Protein Homology CDS 1448219 1449331 . - 0 ID=cds-WP_157808652.1;Parent=gene-NIV78_RS23500;Dbxref=Genbank:WP_157808652.1;Name=WP_157808652.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015000.2;locus_tag=NIV78_RS23500;product=glycerophosphodiester phosphodiesterase family protein;protein_id=WP_157808652.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1449413 1450243 . - . ID=gene-NIV78_RS23505;Name=NIV78_RS23505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23505 NZ_CP100137.1 Protein Homology CDS 1449413 1450243 . - 0 ID=cds-WP_020379760.1;Parent=gene-NIV78_RS23505;Dbxref=Genbank:WP_020379760.1;Name=WP_020379760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733857.1;locus_tag=NIV78_RS23505;product=peptidylprolyl isomerase;protein_id=WP_020379760.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1450722 1451744 . - . ID=gene-NIV78_RS23510;Name=NIV78_RS23510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23510 NZ_CP100137.1 Protein Homology CDS 1450722 1451744 . - 0 ID=cds-WP_017922828.1;Parent=gene-NIV78_RS23510;Dbxref=Genbank:WP_017922828.1;Name=WP_017922828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733856.1;locus_tag=NIV78_RS23510;product=DUF2891 domain-containing protein;protein_id=WP_017922828.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1451761 1452117 . - . ID=gene-NIV78_RS23515;Name=NIV78_RS23515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23515 NZ_CP100137.1 Protein Homology CDS 1451761 1452117 . - 0 ID=cds-WP_257757432.1;Parent=gene-NIV78_RS23515;Dbxref=Genbank:WP_257757432.1;Name=WP_257757432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020071487.1;locus_tag=NIV78_RS23515;product=Fis family transcriptional regulator;protein_id=WP_257757432.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1452228 1453712 . - . ID=gene-NIV78_RS23520;Name=NIV78_RS23520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23520 NZ_CP100137.1 Protein Homology CDS 1452228 1453712 . - 0 ID=cds-WP_012733854.1;Parent=gene-NIV78_RS23520;Dbxref=Genbank:WP_012733854.1;Name=WP_012733854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255557.1;locus_tag=NIV78_RS23520;product=metallopeptidase TldD-related protein;protein_id=WP_012733854.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1453716 1455110 . - . ID=gene-NIV78_RS23525;Name=NIV78_RS23525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23525 NZ_CP100137.1 Protein Homology CDS 1453716 1455110 . - 0 ID=cds-WP_241766963.1;Parent=gene-NIV78_RS23525;Dbxref=Genbank:WP_241766963.1;Name=WP_241766963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733853.1;locus_tag=NIV78_RS23525;product=metallopeptidase TldD-related protein;protein_id=WP_241766963.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1455119 1456402 . - . ID=gene-NIV78_RS23530;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=NIV78_RS23530 NZ_CP100137.1 Protein Homology CDS 1455119 1456402 . - 0 ID=cds-WP_252979790.1;Parent=gene-NIV78_RS23530;Dbxref=Genbank:WP_252979790.1;Name=WP_252979790.1;Ontology_term=GO:0015036,GO:0005737;gbkey=CDS;gene=trxA;go_component=cytoplasm|0005737||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733852.1;locus_tag=NIV78_RS23530;product=thioredoxin;protein_id=WP_252979790.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1456424 1458196 . - . ID=gene-NIV78_RS23535;Name=NIV78_RS23535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23535 NZ_CP100137.1 Protein Homology CDS 1456424 1458196 . - 0 ID=cds-WP_257757434.1;Parent=gene-NIV78_RS23535;Dbxref=Genbank:WP_257757434.1;Name=WP_257757434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734102.1;locus_tag=NIV78_RS23535;product=ABC transporter ATP-binding protein/permease;protein_id=WP_257757434.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1458193 1458615 . - . ID=gene-NIV78_RS23540;Name=NIV78_RS23540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23540 NZ_CP100137.1 Protein Homology CDS 1458193 1458615 . - 0 ID=cds-WP_012733850.1;Parent=gene-NIV78_RS23540;Dbxref=Genbank:WP_012733850.1;Name=WP_012733850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733850.1;locus_tag=NIV78_RS23540;product=biopolymer transporter ExbD;protein_id=WP_012733850.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1458630 1459364 . - . ID=gene-NIV78_RS23545;Name=NIV78_RS23545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23545 NZ_CP100137.1 Protein Homology CDS 1458630 1459364 . - 0 ID=cds-WP_012733849.1;Parent=gene-NIV78_RS23545;Dbxref=Genbank:WP_012733849.1;Name=WP_012733849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733849.1;locus_tag=NIV78_RS23545;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_012733849.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1459388 1460134 . - . ID=gene-NIV78_RS23550;Name=NIV78_RS23550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23550 NZ_CP100137.1 Protein Homology CDS 1459388 1460134 . - 0 ID=cds-WP_232252149.1;Parent=gene-NIV78_RS23550;Dbxref=Genbank:WP_232252149.1;Name=WP_232252149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733848.1;locus_tag=NIV78_RS23550;product=TonB family protein;protein_id=WP_232252149.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1460166 1462556 . - . ID=gene-NIV78_RS23555;Name=NIV78_RS23555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23555 NZ_CP100137.1 Protein Homology CDS 1460166 1462556 . - 0 ID=cds-WP_257757436.1;Parent=gene-NIV78_RS23555;Dbxref=Genbank:WP_257757436.1;Name=WP_257757436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689051.1;locus_tag=NIV78_RS23555;product=TonB-dependent receptor;protein_id=WP_257757436.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1462858 1463322 . - . ID=gene-NIV78_RS23560;Name=NIV78_RS23560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23560 NZ_CP100137.1 Protein Homology CDS 1462858 1463322 . - 0 ID=cds-WP_012733846.1;Parent=gene-NIV78_RS23560;Dbxref=Genbank:WP_012733846.1;Name=WP_012733846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733846.1;locus_tag=NIV78_RS23560;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_012733846.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1463469 1464389 . - . ID=gene-NIV78_RS23565;Name=NIV78_RS23565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23565 NZ_CP100137.1 Protein Homology CDS 1463469 1464389 . - 0 ID=cds-WP_232252151.1;Parent=gene-NIV78_RS23565;Dbxref=Genbank:WP_232252151.1;Name=WP_232252151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336652.1;locus_tag=NIV78_RS23565;product=DUF4880 domain-containing protein;protein_id=WP_232252151.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1464425 1464976 . - . ID=gene-NIV78_RS23570;Name=NIV78_RS23570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23570 NZ_CP100137.1 Protein Homology CDS 1464425 1464976 . - 0 ID=cds-WP_012733844.1;Parent=gene-NIV78_RS23570;Dbxref=Genbank:WP_012733844.1;Name=WP_012733844.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733844.1;locus_tag=NIV78_RS23570;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_012733844.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1465766 1467013 . + . ID=gene-NIV78_RS23575;Name=mhpT;gbkey=Gene;gene=mhpT;gene_biotype=protein_coding;locus_tag=NIV78_RS23575 NZ_CP100137.1 Protein Homology CDS 1465766 1467013 . + 0 ID=cds-WP_012733843.1;Parent=gene-NIV78_RS23575;Dbxref=Genbank:WP_012733843.1;Name=WP_012733843.1;Ontology_term=GO:0055085,GO:0022857,GO:0016021;gbkey=CDS;gene=mhpT;go_component=integral component of membrane|0016021||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733843.1;locus_tag=NIV78_RS23575;product=3-(3-hydroxy-phenyl)propionate transporter MhpT;protein_id=WP_012733843.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1467097 1468239 . + . ID=gene-NIV78_RS23580;Name=NIV78_RS23580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23580 NZ_CP100137.1 Protein Homology CDS 1467097 1468239 . + 0 ID=cds-WP_012733842.1;Parent=gene-NIV78_RS23580;Dbxref=Genbank:WP_012733842.1;Name=WP_012733842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733842.1;locus_tag=NIV78_RS23580;product=porin;protein_id=WP_012733842.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1468259 1469998 . + . ID=gene-NIV78_RS23585;Name=NIV78_RS23585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23585 NZ_CP100137.1 Protein Homology CDS 1468259 1469998 . + 0 ID=cds-WP_017923385.1;Parent=gene-NIV78_RS23585;Dbxref=Genbank:WP_017923385.1;Name=WP_017923385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014971997.1;locus_tag=NIV78_RS23585;product=tannase/feruloyl esterase family alpha/beta hydrolase;protein_id=WP_017923385.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1470047 1470574 . - . ID=gene-NIV78_RS23590;Name=NIV78_RS23590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23590 NZ_CP100137.1 Protein Homology CDS 1470047 1470574 . - 0 ID=cds-WP_012733840.1;Parent=gene-NIV78_RS23590;Dbxref=Genbank:WP_012733840.1;Name=WP_012733840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733840.1;locus_tag=NIV78_RS23590;product=MarR family transcriptional regulator;protein_id=WP_012733840.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1470816 1471643 . + . ID=gene-NIV78_RS23595;Name=NIV78_RS23595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23595 NZ_CP100137.1 Protein Homology CDS 1470816 1471643 . + 0 ID=cds-WP_012733839.1;Parent=gene-NIV78_RS23595;Dbxref=Genbank:WP_012733839.1;Name=WP_012733839.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009933465.1;locus_tag=NIV78_RS23595;product=p-hydroxycinnamoyl CoA hydratase/lyase;protein_id=WP_012733839.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1471683 1473134 . + . ID=gene-NIV78_RS23600;Name=NIV78_RS23600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23600 NZ_CP100137.1 Protein Homology CDS 1471683 1473134 . + 0 ID=cds-WP_012733838.1;Parent=gene-NIV78_RS23600;Dbxref=Genbank:WP_012733838.1;Name=WP_012733838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724289.1;locus_tag=NIV78_RS23600;product=aldehyde dehydrogenase;protein_id=WP_012733838.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1473243 1475126 . + . ID=gene-NIV78_RS23605;Name=NIV78_RS23605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23605 NZ_CP100137.1 Protein Homology CDS 1473243 1475126 . + 0 ID=cds-WP_017924057.1;Parent=gene-NIV78_RS23605;Dbxref=Genbank:WP_017924057.1;Name=WP_017924057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733837.1;locus_tag=NIV78_RS23605;product=feruloyl-CoA synthase;protein_id=WP_017924057.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1475391 1476521 . + . ID=gene-NIV78_RS23610;Name=NIV78_RS23610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23610 NZ_CP100137.1 Protein Homology CDS 1475391 1476521 . + 0 ID=cds-WP_257757439.1;Parent=gene-NIV78_RS23610;Dbxref=Genbank:WP_257757439.1;Name=WP_257757439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007579809.1;locus_tag=NIV78_RS23610;product=DSD1 family PLP-dependent enzyme;protein_id=WP_257757439.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1476669 1477589 . + . ID=gene-NIV78_RS23615;Name=NIV78_RS23615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23615 NZ_CP100137.1 Protein Homology CDS 1476669 1477589 . + 0 ID=cds-WP_017924319.1;Parent=gene-NIV78_RS23615;Dbxref=Genbank:WP_017924319.1;Name=WP_017924319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425321.1;locus_tag=NIV78_RS23615;product=LysR substrate-binding domain-containing protein;protein_id=WP_017924319.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1477852 1478529 . + . ID=gene-NIV78_RS23620;Name=NIV78_RS23620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23620 NZ_CP100137.1 GeneMarkS-2+ CDS 1477852 1478529 . + 0 ID=cds-WP_012733834.1;Parent=gene-NIV78_RS23620;Dbxref=Genbank:WP_012733834.1;Name=WP_012733834.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS23620;product=4-hydroxythreonine-4-phosphate dehydrogenase;protein_id=WP_012733834.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1478606 1479793 . - . ID=gene-NIV78_RS23625;Name=NIV78_RS23625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23625 NZ_CP100137.1 Protein Homology CDS 1478606 1479793 . - 0 ID=cds-WP_035980719.1;Parent=gene-NIV78_RS23625;Dbxref=Genbank:WP_035980719.1;Name=WP_035980719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549830.1;locus_tag=NIV78_RS23625;product=M20 family metallopeptidase;protein_id=WP_035980719.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1479863 1481320 . - . ID=gene-NIV78_RS23630;Name=NIV78_RS23630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23630 NZ_CP100137.1 Protein Homology CDS 1479863 1481320 . - 0 ID=cds-WP_017923417.1;Parent=gene-NIV78_RS23630;Dbxref=Genbank:WP_017923417.1;Name=WP_017923417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549831.1;locus_tag=NIV78_RS23630;product=aldehyde dehydrogenase family protein;protein_id=WP_017923417.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1481324 1482601 . - . ID=gene-NIV78_RS23635;Name=NIV78_RS23635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23635 NZ_CP100137.1 Protein Homology CDS 1481324 1482601 . - 0 ID=cds-WP_012733831.1;Parent=gene-NIV78_RS23635;Dbxref=Genbank:WP_012733831.1;Name=WP_012733831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423965.1;locus_tag=NIV78_RS23635;product=FAD-binding oxidoreductase;protein_id=WP_012733831.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1482714 1484039 . - . ID=gene-NIV78_RS23640;Name=NIV78_RS23640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23640 NZ_CP100137.1 Protein Homology CDS 1482714 1484039 . - 0 ID=cds-WP_017923416.1;Parent=gene-NIV78_RS23640;Dbxref=Genbank:WP_017923416.1;Name=WP_017923416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661232.1;locus_tag=NIV78_RS23640;product=FAD-binding oxidoreductase;protein_id=WP_017923416.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1484043 1484777 . - . ID=gene-NIV78_RS23645;Name=NIV78_RS23645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23645 NZ_CP100137.1 Protein Homology CDS 1484043 1484777 . - 0 ID=cds-WP_251107886.1;Parent=gene-NIV78_RS23645;Dbxref=Genbank:WP_251107886.1;Name=WP_251107886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749706.1;locus_tag=NIV78_RS23645;product=cupin domain-containing protein;protein_id=WP_251107886.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1484897 1485328 . - . ID=gene-NIV78_RS23650;Name=NIV78_RS23650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23650 NZ_CP100137.1 Protein Homology CDS 1484897 1485328 . - 0 ID=cds-WP_251107887.1;Parent=gene-NIV78_RS23650;Dbxref=Genbank:WP_251107887.1;Name=WP_251107887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549834.1;locus_tag=NIV78_RS23650;product=helix-turn-helix domain-containing protein;protein_id=WP_251107887.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1485353 1486630 . - . ID=gene-NIV78_RS23655;Name=NIV78_RS23655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23655 NZ_CP100137.1 Protein Homology CDS 1485353 1486630 . - 0 ID=cds-WP_035979552.1;Parent=gene-NIV78_RS23655;Dbxref=Genbank:WP_035979552.1;Name=WP_035979552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018438593.1;locus_tag=NIV78_RS23655;product=FAD-binding oxidoreductase;protein_id=WP_035979552.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1486763 1488610 . - . ID=gene-NIV78_RS23660;Name=NIV78_RS23660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23660 NZ_CP100137.1 Protein Homology CDS 1486763 1488610 . - 0 ID=cds-WP_012733826.1;Parent=gene-NIV78_RS23660;Dbxref=Genbank:WP_012733826.1;Name=WP_012733826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010099475.1;locus_tag=NIV78_RS23660;product=ABC transporter ATP-binding protein;protein_id=WP_012733826.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1488610 1489563 . - . ID=gene-NIV78_RS23665;Name=NIV78_RS23665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23665 NZ_CP100137.1 Protein Homology CDS 1488610 1489563 . - 0 ID=cds-WP_017424675.1;Parent=gene-NIV78_RS23665;Dbxref=Genbank:WP_017424675.1;Name=WP_017424675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424675.1;locus_tag=NIV78_RS23665;product=ABC transporter permease;protein_id=WP_017424675.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1489594 1490547 . - . ID=gene-NIV78_RS23670;Name=NIV78_RS23670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23670 NZ_CP100137.1 Protein Homology CDS 1489594 1490547 . - 0 ID=cds-WP_012733824.1;Parent=gene-NIV78_RS23670;Dbxref=Genbank:WP_012733824.1;Name=WP_012733824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335753.1;locus_tag=NIV78_RS23670;product=ABC transporter permease;protein_id=WP_012733824.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1490597 1492183 . - . ID=gene-NIV78_RS23675;Name=NIV78_RS23675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23675 NZ_CP100137.1 Protein Homology CDS 1490597 1492183 . - 0 ID=cds-WP_017924171.1;Parent=gene-NIV78_RS23675;Dbxref=Genbank:WP_017924171.1;Name=WP_017924171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661225.1;locus_tag=NIV78_RS23675;product=ABC transporter substrate-binding protein;protein_id=WP_017924171.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1492683 1493351 . - . ID=gene-NIV78_RS23680;Name=NIV78_RS23680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23680 NZ_CP100137.1 Protein Homology CDS 1492683 1493351 . - 0 ID=cds-WP_012733821.1;Parent=gene-NIV78_RS23680;Dbxref=Genbank:WP_012733821.1;Name=WP_012733821.1;Ontology_term=GO:0006805,GO:0018784;gbkey=CDS;go_function=(S)-2-haloacid dehalogenase activity|0018784||IEA;go_process=xenobiotic metabolic process|0006805||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549842.1;locus_tag=NIV78_RS23680;product=haloacid dehalogenase type II;protein_id=WP_012733821.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1493684 1494544 . + . ID=gene-NIV78_RS23685;Name=NIV78_RS23685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23685 NZ_CP100137.1 Protein Homology CDS 1493684 1494544 . + 0 ID=cds-WP_012733819.1;Parent=gene-NIV78_RS23685;Dbxref=Genbank:WP_012733819.1;Name=WP_012733819.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482807.1;locus_tag=NIV78_RS23685;product=GNAT family N-acetyltransferase;protein_id=WP_012733819.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1494556 1495482 . + . ID=gene-NIV78_RS23690;Name=NIV78_RS23690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23690 NZ_CP100137.1 Protein Homology CDS 1494556 1495482 . + 0 ID=cds-WP_017923830.1;Parent=gene-NIV78_RS23690;Dbxref=Genbank:WP_017923830.1;Name=WP_017923830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880483.1;locus_tag=NIV78_RS23690;product=glyoxylate/hydroxypyruvate reductase A;protein_id=WP_017923830.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1495645 1497036 . + . ID=gene-NIV78_RS23695;Name=NIV78_RS23695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23695 NZ_CP100137.1 Protein Homology CDS 1495645 1497036 . + 0 ID=cds-WP_017425047.1;Parent=gene-NIV78_RS23695;Dbxref=Genbank:WP_017425047.1;Name=WP_017425047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733817.1;locus_tag=NIV78_RS23695;product=aspartate aminotransferase family protein;protein_id=WP_017425047.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1497131 1497622 . + . ID=gene-NIV78_RS23700;Name=NIV78_RS23700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23700 NZ_CP100137.1 Protein Homology CDS 1497131 1497622 . + 0 ID=cds-WP_012733816.1;Parent=gene-NIV78_RS23700;Dbxref=Genbank:WP_012733816.1;Name=WP_012733816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880485.1;locus_tag=NIV78_RS23700;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_012733816.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1497720 1499192 . + . ID=gene-NIV78_RS23705;Name=NIV78_RS23705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23705 NZ_CP100137.1 Protein Homology CDS 1497720 1499192 . + 0 ID=cds-WP_153478805.1;Parent=gene-NIV78_RS23705;Dbxref=Genbank:WP_153478805.1;Name=WP_153478805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010100339.1;locus_tag=NIV78_RS23705;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_153478805.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1499473 1500861 . + . ID=gene-NIV78_RS23710;Name=NIV78_RS23710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23710 NZ_CP100137.1 Protein Homology CDS 1499473 1500861 . + 0 ID=cds-WP_012733814.1;Parent=gene-NIV78_RS23710;Dbxref=Genbank:WP_012733814.1;Name=WP_012733814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008345420.1;locus_tag=NIV78_RS23710;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_012733814.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1501436 1502989 . + . ID=gene-NIV78_RS23715;Name=NIV78_RS23715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23715 NZ_CP100137.1 Protein Homology CDS 1501436 1502989 . + 0 ID=cds-WP_257757443.1;Parent=gene-NIV78_RS23715;Dbxref=Genbank:WP_257757443.1;Name=WP_257757443.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011004317.1;locus_tag=NIV78_RS23715;product=methyl-accepting chemotaxis protein;protein_id=WP_257757443.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1503175 1505244 . - . ID=gene-NIV78_RS23720;Name=NIV78_RS23720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23720 NZ_CP100137.1 Protein Homology CDS 1503175 1505244 . - 0 ID=cds-WP_017922879.1;Parent=gene-NIV78_RS23720;Dbxref=Genbank:WP_017922879.1;Name=WP_017922879.1;Ontology_term=GO:0004629;gbkey=CDS;go_function=phospholipase C activity|0004629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733812.1;locus_tag=NIV78_RS23720;product=phospholipase C%2C phosphocholine-specific;protein_id=WP_017922879.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1505585 1507048 . - . ID=gene-NIV78_RS23725;Name=NIV78_RS23725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23725 NZ_CP100137.1 Protein Homology CDS 1505585 1507048 . - 0 ID=cds-WP_017922878.1;Parent=gene-NIV78_RS23725;Dbxref=Genbank:WP_017922878.1;Name=WP_017922878.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733811.1;locus_tag=NIV78_RS23725;product=efflux transporter outer membrane subunit;protein_id=WP_017922878.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1507053 1510196 . - . ID=gene-NIV78_RS23730;Name=NIV78_RS23730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23730 NZ_CP100137.1 Protein Homology CDS 1507053 1510196 . - 0 ID=cds-WP_017432753.1;Parent=gene-NIV78_RS23730;Dbxref=Genbank:WP_017432753.1;Name=WP_017432753.1;Ontology_term=GO:0042908,GO:0055085,GO:0015562,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900003.1;locus_tag=NIV78_RS23730;product=multidrug efflux RND transporter permease subunit;protein_id=WP_017432753.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1510217 1511377 . - . ID=gene-NIV78_RS23735;Name=NIV78_RS23735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23735 NZ_CP100137.1 Protein Homology CDS 1510217 1511377 . - 0 ID=cds-WP_017922877.1;Parent=gene-NIV78_RS23735;Dbxref=Genbank:WP_017922877.1;Name=WP_017922877.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733810.1;locus_tag=NIV78_RS23735;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_017922877.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1511502 1512239 . + . ID=gene-NIV78_RS23740;Name=NIV78_RS23740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23740 NZ_CP100137.1 Protein Homology CDS 1511502 1512239 . + 0 ID=cds-WP_026051802.1;Parent=gene-NIV78_RS23740;Dbxref=Genbank:WP_026051802.1;Name=WP_026051802.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733809.1;locus_tag=NIV78_RS23740;product=response regulator;protein_id=WP_026051802.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1512236 1513321 . + . ID=gene-NIV78_RS23745;Name=NIV78_RS23745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23745 NZ_CP100137.1 Protein Homology CDS 1512236 1513321 . + 0 ID=cds-WP_017922876.1;Parent=gene-NIV78_RS23745;Dbxref=Genbank:WP_017922876.1;Name=WP_017922876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733808.1;locus_tag=NIV78_RS23745;product=ATP-binding protein;protein_id=WP_017922876.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1513450 1515159 . - . ID=gene-NIV78_RS23750;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=NIV78_RS23750 NZ_CP100137.1 Protein Homology CDS 1513450 1515159 . - 0 ID=cds-WP_198292464.1;Parent=gene-NIV78_RS23750;Dbxref=Genbank:WP_198292464.1;Name=WP_198292464.1;Ontology_term=GO:0009098,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338929.1;locus_tag=NIV78_RS23750;product=2-isopropylmalate synthase;protein_id=WP_198292464.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1515736 1519233 . - . ID=gene-NIV78_RS23755;Name=NIV78_RS23755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23755 NZ_CP100137.1 Protein Homology CDS 1515736 1519233 . - 0 ID=cds-WP_251107890.1;Parent=gene-NIV78_RS23755;Dbxref=Genbank:WP_251107890.1;Name=WP_251107890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733806.1;locus_tag=NIV78_RS23755;product=AAA family ATPase;protein_id=WP_251107890.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1519237 1520505 . - . ID=gene-NIV78_RS23760;Name=NIV78_RS23760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23760 NZ_CP100137.1 Protein Homology CDS 1519237 1520505 . - 0 ID=cds-WP_012733805.1;Parent=gene-NIV78_RS23760;Dbxref=Genbank:WP_012733805.1;Name=WP_012733805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405536.1;locus_tag=NIV78_RS23760;product=DNA repair exonuclease;protein_id=WP_012733805.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1520693 1523461 . - . ID=gene-NIV78_RS23765;Name=NIV78_RS23765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23765 NZ_CP100137.1 Protein Homology CDS 1520693 1523461 . - 0 ID=cds-WP_100556069.1;Parent=gene-NIV78_RS23765;Dbxref=Genbank:WP_100556069.1;Name=WP_100556069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733804.1;locus_tag=NIV78_RS23765;product=penicillin acylase family protein;protein_id=WP_100556069.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1523684 1524133 . - . ID=gene-NIV78_RS23770;Name=NIV78_RS23770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23770 NZ_CP100137.1 Protein Homology CDS 1523684 1524133 . - 0 ID=cds-WP_017424038.1;Parent=gene-NIV78_RS23770;Dbxref=Genbank:WP_017424038.1;Name=WP_017424038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424038.1;locus_tag=NIV78_RS23770;product=transcriptional repressor;protein_id=WP_017424038.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1524409 1525056 . + . ID=gene-NIV78_RS23775;Name=NIV78_RS23775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23775 NZ_CP100137.1 Protein Homology CDS 1524409 1525056 . + 0 ID=cds-WP_017424039.1;Parent=gene-NIV78_RS23775;Dbxref=Genbank:WP_017424039.1;Name=WP_017424039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733802.1;locus_tag=NIV78_RS23775;product=nitroreductase;protein_id=WP_017424039.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1525148 1526902 . - . ID=gene-NIV78_RS23780;Name=NIV78_RS23780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23780 NZ_CP100137.1 Protein Homology CDS 1525148 1526902 . - 0 ID=cds-WP_012733801.1;Parent=gene-NIV78_RS23780;Dbxref=Genbank:WP_012733801.1;Name=WP_012733801.1;Ontology_term=GO:0015833,GO:0005524,GO:0140359,GO:1904680,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733801.1;locus_tag=NIV78_RS23780;product=cyclic peptide export ABC transporter;protein_id=WP_012733801.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1527237 1527506 . + . ID=gene-NIV78_RS23785;Name=NIV78_RS23785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23785 NZ_CP100137.1 Protein Homology CDS 1527237 1527506 . + 0 ID=cds-WP_012733800.1;Parent=gene-NIV78_RS23785;Dbxref=Genbank:WP_012733800.1;Name=WP_012733800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690443.1;locus_tag=NIV78_RS23785;product=hypothetical protein;protein_id=WP_012733800.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1528002 1529096 . - . ID=gene-NIV78_RS23790;Name=NIV78_RS23790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23790 NZ_CP100137.1 Protein Homology CDS 1528002 1529096 . - 0 ID=cds-WP_012733799.1;Parent=gene-NIV78_RS23790;Dbxref=Genbank:WP_012733799.1;Name=WP_012733799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733799.1;locus_tag=NIV78_RS23790;product=hypothetical protein;protein_id=WP_012733799.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1529599 1530276 . + . ID=gene-NIV78_RS23795;Name=NIV78_RS23795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23795 NZ_CP100137.1 Protein Homology CDS 1529599 1530276 . + 0 ID=cds-WP_241766863.1;Parent=gene-NIV78_RS23795;Dbxref=Genbank:WP_241766863.1;Name=WP_241766863.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733798.1;locus_tag=NIV78_RS23795;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_241766863.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1530273 1531376 . + . ID=gene-NIV78_RS23800;Name=NIV78_RS23800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23800 NZ_CP100137.1 Protein Homology CDS 1530273 1531376 . + 0 ID=cds-WP_257757444.1;Parent=gene-NIV78_RS23800;Dbxref=Genbank:WP_257757444.1;Name=WP_257757444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733797.1;locus_tag=NIV78_RS23800;product=poly(3-hydroxybutyrate) depolymerase;protein_id=WP_257757444.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1531484 1532026 . + . ID=gene-NIV78_RS23805;Name=NIV78_RS23805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23805 NZ_CP100137.1 Protein Homology CDS 1531484 1532026 . + 0 ID=cds-WP_232734557.1;Parent=gene-NIV78_RS23805;Dbxref=Genbank:WP_232734557.1;Name=WP_232734557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424042.1;locus_tag=NIV78_RS23805;product=hypothetical protein;protein_id=WP_232734557.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1532113 1533627 . - . ID=gene-NIV78_RS23810;Name=NIV78_RS23810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23810 NZ_CP100137.1 Protein Homology CDS 1532113 1533627 . - 0 ID=cds-WP_012733795.1;Parent=gene-NIV78_RS23810;Dbxref=Genbank:WP_012733795.1;Name=WP_012733795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733795.1;locus_tag=NIV78_RS23810;product=acetyl-CoA hydrolase/transferase family protein;protein_id=WP_012733795.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1534124 1538344 . - . ID=gene-NIV78_RS23815;Name=NIV78_RS23815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23815 NZ_CP100137.1 Protein Homology CDS 1534124 1538344 . - 0 ID=cds-WP_100556068.1;Parent=gene-NIV78_RS23815;Dbxref=Genbank:WP_100556068.1;Name=WP_100556068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197729.1;locus_tag=NIV78_RS23815;product=bifunctional nitrate reductase/sulfite reductase flavoprotein subunit alpha;protein_id=WP_100556068.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1538429 1538794 . - . ID=gene-NIV78_RS23820;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=NIV78_RS23820 NZ_CP100137.1 Protein Homology CDS 1538429 1538794 . - 0 ID=cds-WP_012733793.1;Parent=gene-NIV78_RS23820;Dbxref=Genbank:WP_012733793.1;Name=WP_012733793.1;Ontology_term=GO:0008942,GO:0051537;gbkey=CDS;gene=nirD;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733793.1;locus_tag=NIV78_RS23820;product=nitrite reductase small subunit NirD;protein_id=WP_012733793.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1538834 1541368 . - . ID=gene-NIV78_RS23825;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=NIV78_RS23825 NZ_CP100137.1 Protein Homology CDS 1538834 1541368 . - 0 ID=cds-WP_017923413.1;Parent=gene-NIV78_RS23825;Dbxref=Genbank:WP_017923413.1;Name=WP_017923413.1;Ontology_term=GO:0042128,GO:0008942,GO:0016491,GO:0050660,GO:0050661;gbkey=CDS;gene=nirB;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=nitrate assimilation|0042128||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733792.1;locus_tag=NIV78_RS23825;product=nitrite reductase large subunit NirB;protein_id=WP_017923413.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1541410 1542735 . - . ID=gene-NIV78_RS23830;Name=NIV78_RS23830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23830 NZ_CP100137.1 Protein Homology CDS 1541410 1542735 . - 0 ID=cds-WP_017923414.1;Parent=gene-NIV78_RS23830;Dbxref=Genbank:WP_017923414.1;Name=WP_017923414.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733791.1;locus_tag=NIV78_RS23830;product=MFS transporter;protein_id=WP_017923414.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1543387 1544199 . + . ID=gene-NIV78_RS23835;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=NIV78_RS23835 NZ_CP100137.1 Protein Homology CDS 1543387 1544199 . + 0 ID=cds-WP_100556067.1;Parent=gene-NIV78_RS23835;Dbxref=Genbank:WP_100556067.1;Name=WP_100556067.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733790.1;locus_tag=NIV78_RS23835;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_100556067.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1544335 1544943 . + . ID=gene-NIV78_RS23840;Name=NIV78_RS23840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23840 NZ_CP100137.1 Protein Homology CDS 1544335 1544943 . + 0 ID=cds-WP_012733789.1;Parent=gene-NIV78_RS23840;Dbxref=Genbank:WP_012733789.1;Name=WP_012733789.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733789.1;locus_tag=NIV78_RS23840;product=ANTAR domain-containing protein;protein_id=WP_012733789.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1544940 1545989 . + . ID=gene-NIV78_RS23845;Name=NIV78_RS23845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23845 NZ_CP100137.1 Protein Homology CDS 1544940 1545989 . + 0 ID=cds-WP_017423841.1;Parent=gene-NIV78_RS23845;Dbxref=Genbank:WP_017423841.1;Name=WP_017423841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733788.1;locus_tag=NIV78_RS23845;product=ABC transporter substrate-binding protein;protein_id=WP_017423841.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1547019 1547237 . + . ID=gene-NIV78_RS23850;Name=NIV78_RS23850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23850 NZ_CP100137.1 Protein Homology CDS 1547019 1547237 . + 0 ID=cds-WP_012733787.1;Parent=gene-NIV78_RS23850;Dbxref=Genbank:WP_012733787.1;Name=WP_012733787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733787.1;locus_tag=NIV78_RS23850;product=MbtH family NRPS accessory protein;protein_id=WP_012733787.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1547376 1548857 . + . ID=gene-NIV78_RS23855;Name=NIV78_RS23855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23855 NZ_CP100137.1 Protein Homology CDS 1547376 1548857 . + 0 ID=cds-WP_012733786.1;Parent=gene-NIV78_RS23855;Dbxref=Genbank:WP_012733786.1;Name=WP_012733786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733786.1;locus_tag=NIV78_RS23855;product=MBL fold metallo-hydrolase;protein_id=WP_012733786.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1548854 1549744 . + . ID=gene-NIV78_RS23860;Name=NIV78_RS23860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23860 NZ_CP100137.1 Protein Homology CDS 1548854 1549744 . + 0 ID=cds-WP_017922822.1;Parent=gene-NIV78_RS23860;Dbxref=Genbank:WP_017922822.1;Name=WP_017922822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733785.1;locus_tag=NIV78_RS23860;product=cupin-like domain-containing protein;protein_id=WP_017922822.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1549774 1551189 . + . ID=gene-NIV78_RS23865;Name=NIV78_RS23865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23865 NZ_CP100137.1 Protein Homology CDS 1549774 1551189 . + 0 ID=cds-WP_017922823.1;Parent=gene-NIV78_RS23865;Dbxref=Genbank:WP_017922823.1;Name=WP_017922823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733784.1;locus_tag=NIV78_RS23865;product=hypothetical protein;protein_id=WP_017922823.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1551251 1554508 . + . ID=gene-NIV78_RS23870;Name=NIV78_RS23870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23870 NZ_CP100137.1 Protein Homology CDS 1551251 1554508 . + 0 ID=cds-WP_017424824.1;Parent=gene-NIV78_RS23870;Dbxref=Genbank:WP_017424824.1;Name=WP_017424824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424824.1;locus_tag=NIV78_RS23870;product=non-ribosomal peptide synthetase;protein_id=WP_017424824.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1554508 1568592 . + . ID=gene-NIV78_RS23875;Name=NIV78_RS23875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23875 NZ_CP100137.1 Protein Homology CDS 1554508 1568592 . + 0 ID=cds-WP_257757445.1;Parent=gene-NIV78_RS23875;Dbxref=Genbank:WP_257757445.1;Name=WP_257757445.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF003417.0;locus_tag=NIV78_RS23875;product=amino acid adenylation domain-containing protein;protein_id=WP_257757445.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1568585 1570180 . + . ID=gene-NIV78_RS23880;Name=NIV78_RS23880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23880 NZ_CP100137.1 Protein Homology CDS 1568585 1570180 . + 0 ID=cds-WP_017423550.1;Parent=gene-NIV78_RS23880;Dbxref=Genbank:WP_017423550.1;Name=WP_017423550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733781.1;locus_tag=NIV78_RS23880;product=MBL fold metallo-hydrolase;protein_id=WP_017423550.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1570375 1571643 . + . ID=gene-NIV78_RS23885;Name=NIV78_RS23885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23885 NZ_CP100137.1 Protein Homology CDS 1570375 1571643 . + 0 ID=cds-WP_236577902.1;Parent=gene-NIV78_RS23885;Dbxref=Genbank:WP_236577902.1;Name=WP_236577902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423551.1;locus_tag=NIV78_RS23885;product=serine hydrolase;protein_id=WP_236577902.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1571650 1572096 . + . ID=gene-NIV78_RS23890;Name=NIV78_RS23890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23890 NZ_CP100137.1 Protein Homology CDS 1571650 1572096 . + 0 ID=cds-WP_012733779.1;Parent=gene-NIV78_RS23890;Dbxref=Genbank:WP_012733779.1;Name=WP_012733779.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733779.1;locus_tag=NIV78_RS23890;product=GNAT family N-acetyltransferase;protein_id=WP_012733779.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1572093 1573403 . + . ID=gene-NIV78_RS23895;Name=NIV78_RS23895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23895 NZ_CP100137.1 Protein Homology CDS 1572093 1573403 . + 0 ID=cds-WP_012733778.1;Parent=gene-NIV78_RS23895;Dbxref=Genbank:WP_012733778.1;Name=WP_012733778.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733778.1;locus_tag=NIV78_RS23895;product=MFS transporter;protein_id=WP_012733778.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1573400 1574227 . + . ID=gene-NIV78_RS23900;Name=NIV78_RS23900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23900 NZ_CP100137.1 Protein Homology CDS 1573400 1574227 . + 0 ID=cds-WP_017425390.1;Parent=gene-NIV78_RS23900;Dbxref=Genbank:WP_017425390.1;Name=WP_017425390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425390.1;locus_tag=NIV78_RS23900;product=aspartyl/asparaginyl beta-hydroxylase domain-containing protein;protein_id=WP_017425390.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1574224 1574673 . - . ID=gene-NIV78_RS23905;Name=NIV78_RS23905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23905 NZ_CP100137.1 GeneMarkS-2+ CDS 1574224 1574673 . - 0 ID=cds-WP_153478780.1;Parent=gene-NIV78_RS23905;Dbxref=Genbank:WP_153478780.1;Name=WP_153478780.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS23905;product=hypothetical protein;protein_id=WP_153478780.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1575182 1575601 . + . ID=gene-NIV78_RS23910;Name=NIV78_RS23910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23910 NZ_CP100137.1 Protein Homology CDS 1575182 1575601 . + 0 ID=cds-WP_232252154.1;Parent=gene-NIV78_RS23910;Dbxref=Genbank:WP_232252154.1;Name=WP_232252154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690670.1;locus_tag=NIV78_RS23910;product=DUF1842 domain-containing protein;protein_id=WP_232252154.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1575727 1583712 . - . ID=gene-NIV78_RS23915;Name=NIV78_RS23915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23915 NZ_CP100137.1 Protein Homology CDS 1575727 1583712 . - 0 ID=cds-WP_257757446.1;Parent=gene-NIV78_RS23915;Dbxref=Genbank:WP_257757446.1;Name=WP_257757446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733775.1;locus_tag=NIV78_RS23915;product=amino acid adenylation domain-containing protein;protein_id=WP_257757446.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1583709 1592192 . - . ID=gene-NIV78_RS23920;Name=NIV78_RS23920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23920 NZ_CP100137.1 Protein Homology CDS 1583709 1592192 . - 0 ID=cds-WP_251107894.1;Parent=gene-NIV78_RS23920;Dbxref=Genbank:WP_251107894.1;Name=WP_251107894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733774.1;locus_tag=NIV78_RS23920;product=amino acid adenylation domain-containing protein;protein_id=WP_251107894.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1592280 1593338 . - . ID=gene-NIV78_RS23925;Name=NIV78_RS23925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23925 NZ_CP100137.1 Protein Homology CDS 1592280 1593338 . - 0 ID=cds-WP_012733773.1;Parent=gene-NIV78_RS23925;Dbxref=Genbank:WP_012733773.1;Name=WP_012733773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690455.1;locus_tag=NIV78_RS23925;product=YqcI/YcgG family protein;protein_id=WP_012733773.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1593433 1594869 . - . ID=gene-NIV78_RS23930;Name=NIV78_RS23930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23930 NZ_CP100137.1 Protein Homology CDS 1593433 1594869 . - 0 ID=cds-WP_251107895.1;Parent=gene-NIV78_RS23930;Dbxref=Genbank:WP_251107895.1;Name=WP_251107895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733772.1;locus_tag=NIV78_RS23930;product=peptide synthetase;protein_id=WP_251107895.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1595441 1597615 . - . ID=gene-NIV78_RS23935;Name=NIV78_RS23935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23935 NZ_CP100137.1 Protein Homology CDS 1595441 1597615 . - 0 ID=cds-WP_257757447.1;Parent=gene-NIV78_RS23935;Dbxref=Genbank:WP_257757447.1;Name=WP_257757447.1;Ontology_term=GO:0015891,GO:0015343,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=siderophore transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733771.1;locus_tag=NIV78_RS23935;product=TonB-dependent siderophore receptor;protein_id=WP_257757447.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1598100 1600112 . - . ID=gene-NIV78_RS23940;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=NIV78_RS23940 NZ_CP100137.1 Protein Homology CDS 1598100 1600112 . - 0 ID=cds-WP_257757448.1;Parent=gene-NIV78_RS23940;Dbxref=Genbank:WP_257757448.1;Name=WP_257757448.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=fhuB;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733770.1;locus_tag=NIV78_RS23940;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=WP_257757448.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1600117 1601085 . - . ID=gene-NIV78_RS23945;Name=NIV78_RS23945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23945 NZ_CP100137.1 Protein Homology CDS 1600117 1601085 . - 0 ID=cds-WP_100556482.1;Parent=gene-NIV78_RS23945;Dbxref=Genbank:WP_100556482.1;Name=WP_100556482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733769.1;locus_tag=NIV78_RS23945;product=iron-siderophore ABC transporter substrate-binding protein;protein_id=WP_100556482.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1601118 1601912 . - . ID=gene-NIV78_RS23950;Name=NIV78_RS23950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23950 NZ_CP100137.1 Protein Homology CDS 1601118 1601912 . - 0 ID=cds-WP_012733768.1;Parent=gene-NIV78_RS23950;Dbxref=Genbank:WP_012733768.1;Name=WP_012733768.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690460.1;locus_tag=NIV78_RS23950;product=ATP-binding cassette domain-containing protein;protein_id=WP_012733768.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1601992 1607616 . - . ID=gene-NIV78_RS23955;Name=NIV78_RS23955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23955 NZ_CP100137.1 Protein Homology CDS 1601992 1607616 . - 0 ID=cds-WP_251107897.1;Parent=gene-NIV78_RS23955;Dbxref=Genbank:WP_251107897.1;Name=WP_251107897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733767.1;locus_tag=NIV78_RS23955;product=amino acid adenylation domain-containing protein;protein_id=WP_251107897.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1607714 1618780 . - . ID=gene-NIV78_RS23960;Name=NIV78_RS23960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23960 NZ_CP100137.1 Protein Homology CDS 1607714 1618780 . - 0 ID=cds-WP_257757449.1;Parent=gene-NIV78_RS23960;Dbxref=Genbank:WP_257757449.1;Name=WP_257757449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733766.1;locus_tag=NIV78_RS23960;product=amino acid adenylation domain-containing protein;protein_id=WP_257757449.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1618901 1619893 . - . ID=gene-NIV78_RS23965;Name=NIV78_RS23965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23965 NZ_CP100137.1 Protein Homology CDS 1618901 1619893 . - 0 ID=cds-WP_035978666.1;Parent=gene-NIV78_RS23965;Dbxref=Genbank:WP_035978666.1;Name=WP_035978666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690463.1;locus_tag=NIV78_RS23965;product=TauD/TfdA family dioxygenase;protein_id=WP_035978666.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1619881 1620687 . - . ID=gene-NIV78_RS23970;Name=NIV78_RS23970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23970 NZ_CP100137.1 Protein Homology CDS 1619881 1620687 . - 0 ID=cds-WP_012733764.1;Parent=gene-NIV78_RS23970;Dbxref=Genbank:WP_012733764.1;Name=WP_012733764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690464.1;locus_tag=NIV78_RS23970;product=alpha/beta fold hydrolase;protein_id=WP_012733764.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1620691 1620918 . - . ID=gene-NIV78_RS23975;Name=NIV78_RS23975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23975 NZ_CP100137.1 Protein Homology CDS 1620691 1620918 . - 0 ID=cds-WP_012733763.1;Parent=gene-NIV78_RS23975;Dbxref=Genbank:WP_012733763.1;Name=WP_012733763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733763.1;locus_tag=NIV78_RS23975;product=MbtH family NRPS accessory protein;protein_id=WP_012733763.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1621488 1622336 . + . ID=gene-NIV78_RS23980;Name=NIV78_RS23980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23980 NZ_CP100137.1 Protein Homology CDS 1621488 1622336 . + 0 ID=cds-WP_153478770.1;Parent=gene-NIV78_RS23980;Dbxref=Genbank:WP_153478770.1;Name=WP_153478770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733762.1;locus_tag=NIV78_RS23980;product=hypothetical protein;protein_id=WP_153478770.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1622569 1623318 . + . ID=gene-NIV78_RS23985;Name=NIV78_RS23985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23985 NZ_CP100137.1 Protein Homology CDS 1622569 1623318 . + 0 ID=cds-WP_257757451.1;Parent=gene-NIV78_RS23985;Dbxref=Genbank:WP_257757451.1;Name=WP_257757451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733761.1;locus_tag=NIV78_RS23985;product=hypothetical protein;protein_id=WP_257757451.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1623431 1623922 . + . ID=gene-NIV78_RS23990;Name=NIV78_RS23990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS23990 NZ_CP100137.1 Protein Homology CDS 1623431 1623922 . + 0 ID=cds-WP_012733760.1;Parent=gene-NIV78_RS23990;Dbxref=Genbank:WP_012733760.1;Name=WP_012733760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733760.1;locus_tag=NIV78_RS23990;product=GNAT family N-acetyltransferase;protein_id=WP_012733760.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1623976 1624875 . - . ID=gene-NIV78_RS23995;Name=cynR;gbkey=Gene;gene=cynR;gene_biotype=protein_coding;locus_tag=NIV78_RS23995 NZ_CP100137.1 Protein Homology CDS 1623976 1624875 . - 0 ID=cds-WP_017924293.1;Parent=gene-NIV78_RS23995;Dbxref=Genbank:WP_017924293.1;Name=WP_017924293.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cynR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733759.1;locus_tag=NIV78_RS23995;product=transcriptional regulator CynR;protein_id=WP_017924293.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1625155 1625625 . + . ID=gene-NIV78_RS24000;Name=cynS;gbkey=Gene;gene=cynS;gene_biotype=protein_coding;locus_tag=NIV78_RS24000 NZ_CP100137.1 Protein Homology CDS 1625155 1625625 . + 0 ID=cds-WP_012733758.1;Parent=gene-NIV78_RS24000;Dbxref=Genbank:WP_012733758.1;Name=WP_012733758.1;Ontology_term=GO:0009636,GO:0008824;gbkey=CDS;gene=cynS;go_function=cyanate hydratase activity|0008824||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020204195.1;locus_tag=NIV78_RS24000;product=cyanase;protein_id=WP_012733758.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1626024 1626344 . + . ID=gene-NIV78_RS24005;Name=NIV78_RS24005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24005 NZ_CP100137.1 Protein Homology CDS 1626024 1626344 . + 0 ID=cds-WP_017424125.1;Parent=gene-NIV78_RS24005;Dbxref=Genbank:WP_017424125.1;Name=WP_017424125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733757.1;locus_tag=NIV78_RS24005;product=hypothetical protein;protein_id=WP_017424125.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1627345 1629612 . + . ID=gene-NIV78_RS24010;Name=NIV78_RS24010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24010 NZ_CP100137.1 Protein Homology CDS 1627345 1629612 . + 0 ID=cds-WP_012733756.1;Parent=gene-NIV78_RS24010;Dbxref=Genbank:WP_012733756.1;Name=WP_012733756.1;Ontology_term=GO:0004629;gbkey=CDS;go_function=phospholipase C activity|0004629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733756.1;locus_tag=NIV78_RS24010;product=phospholipase C%2C phosphocholine-specific;protein_id=WP_012733756.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1630279 1631826 . + . ID=gene-NIV78_RS24015;Name=NIV78_RS24015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24015 NZ_CP100137.1 Protein Homology CDS 1630279 1631826 . + 0 ID=cds-WP_251107899.1;Parent=gene-NIV78_RS24015;Dbxref=Genbank:WP_251107899.1;Name=WP_251107899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733755.1;locus_tag=NIV78_RS24015;product=AbfB domain-containing protein;protein_id=WP_251107899.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1631930 1632178 . - . ID=gene-NIV78_RS24020;Name=NIV78_RS24020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24020 NZ_CP100137.1 Protein Homology CDS 1631930 1632178 . - 0 ID=cds-WP_017432648.1;Parent=gene-NIV78_RS24020;Dbxref=Genbank:WP_017432648.1;Name=WP_017432648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425513.1;locus_tag=NIV78_RS24020;product=hypothetical protein;protein_id=WP_017432648.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1632339 1634060 . - . ID=gene-NIV78_RS24025;Name=NIV78_RS24025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24025 NZ_CP100137.1 Protein Homology CDS 1632339 1634060 . - 0 ID=cds-WP_153478764.1;Parent=gene-NIV78_RS24025;Dbxref=Genbank:WP_153478764.1;Name=WP_153478764.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733754.1;locus_tag=NIV78_RS24025;product=methyl-accepting chemotaxis protein;protein_id=WP_153478764.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1634220 1634555 . + . ID=gene-NIV78_RS24030;Name=NIV78_RS24030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24030 NZ_CP100137.1 Protein Homology CDS 1634220 1634555 . + 0 ID=cds-WP_257757454.1;Parent=gene-NIV78_RS24030;Dbxref=Genbank:WP_257757454.1;Name=WP_257757454.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733753.1;locus_tag=NIV78_RS24030;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WP_257757454.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1634552 1634983 . + . ID=gene-NIV78_RS24035;Name=NIV78_RS24035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24035 NZ_CP100137.1 Protein Homology CDS 1634552 1634983 . + 0 ID=cds-WP_017924248.1;Parent=gene-NIV78_RS24035;Dbxref=Genbank:WP_017924248.1;Name=WP_017924248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733752.1;locus_tag=NIV78_RS24035;product=YeeE/YedE family protein;protein_id=WP_017924248.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1634985 1635410 . + . ID=gene-NIV78_RS24040;Name=NIV78_RS24040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24040 NZ_CP100137.1 Protein Homology CDS 1634985 1635410 . + 0 ID=cds-WP_012733751.1;Parent=gene-NIV78_RS24040;Dbxref=Genbank:WP_012733751.1;Name=WP_012733751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733751.1;locus_tag=NIV78_RS24040;product=YeeE/YedE family protein;protein_id=WP_012733751.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1635591 1636577 . - . ID=gene-NIV78_RS24045;Name=NIV78_RS24045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24045 NZ_CP100137.1 Protein Homology CDS 1635591 1636577 . - 0 ID=cds-WP_012733750.1;Parent=gene-NIV78_RS24045;Dbxref=Genbank:WP_012733750.1;Name=WP_012733750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733750.1;locus_tag=NIV78_RS24045;product=cation diffusion facilitator family transporter;protein_id=WP_012733750.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1636774 1637607 . - . ID=gene-NIV78_RS24050;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=NIV78_RS24050 NZ_CP100137.1 Protein Homology CDS 1636774 1637607 . - 0 ID=cds-WP_012733749.1;Parent=gene-NIV78_RS24050;Dbxref=Genbank:WP_012733749.1;Name=WP_012733749.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752565.1;locus_tag=NIV78_RS24050;product=shikimate dehydrogenase;protein_id=WP_012733749.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1637615 1638829 . - . ID=gene-NIV78_RS24055;Name=NIV78_RS24055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24055 NZ_CP100137.1 Protein Homology CDS 1637615 1638829 . - 0 ID=cds-WP_017922584.1;Parent=gene-NIV78_RS24055;Dbxref=Genbank:WP_017922584.1;Name=WP_017922584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424477.1;locus_tag=NIV78_RS24055;product=CoA transferase;protein_id=WP_017922584.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1638826 1639287 . - . ID=gene-NIV78_RS24060;Name=NIV78_RS24060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24060 NZ_CP100137.1 Protein Homology CDS 1638826 1639287 . - 0 ID=cds-WP_017424476.1;Parent=gene-NIV78_RS24060;Dbxref=Genbank:WP_017424476.1;Name=WP_017424476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008922542.1;locus_tag=NIV78_RS24060;product=MaoC family dehydratase;protein_id=WP_017424476.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1639289 1639681 . - . ID=gene-NIV78_RS24065;Name=NIV78_RS24065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24065 NZ_CP100137.1 Protein Homology CDS 1639289 1639681 . - 0 ID=cds-WP_012733746.1;Parent=gene-NIV78_RS24065;Dbxref=Genbank:WP_012733746.1;Name=WP_012733746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020066714.1;locus_tag=NIV78_RS24065;product=VOC family protein;protein_id=WP_012733746.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1639678 1640628 . - . ID=gene-NIV78_RS24070;Name=NIV78_RS24070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24070 NZ_CP100137.1 Protein Homology CDS 1639678 1640628 . - 0 ID=cds-WP_012733745.1;Parent=gene-NIV78_RS24070;Dbxref=Genbank:WP_012733745.1;Name=WP_012733745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010094003.1;locus_tag=NIV78_RS24070;product=ketopantoate reductase family protein;protein_id=WP_012733745.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1640734 1641654 . + . ID=gene-NIV78_RS24075;Name=NIV78_RS24075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24075 NZ_CP100137.1 Protein Homology CDS 1640734 1641654 . + 0 ID=cds-WP_012733744.1;Parent=gene-NIV78_RS24075;Dbxref=Genbank:WP_012733744.1;Name=WP_012733744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733744.1;locus_tag=NIV78_RS24075;product=LysR family transcriptional regulator;protein_id=WP_012733744.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1641790 1642596 . - . ID=gene-NIV78_RS24080;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=NIV78_RS24080 NZ_CP100137.1 Protein Homology CDS 1641790 1642596 . - 0 ID=cds-WP_012733743.1;Parent=gene-NIV78_RS24080;Dbxref=Genbank:WP_012733743.1;Name=WP_012733743.1;Ontology_term=GO:0006790,GO:0008441;gbkey=CDS;gene=cysQ;go_function=3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733743.1;locus_tag=NIV78_RS24080;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_012733743.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1642699 1643049 . - . ID=gene-NIV78_RS24085;Name=NIV78_RS24085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24085 NZ_CP100137.1 GeneMarkS-2+ CDS 1642699 1643049 . - 0 ID=cds-WP_124837457.1;Parent=gene-NIV78_RS24085;Dbxref=Genbank:WP_124837457.1;Name=WP_124837457.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS24085;product=hypothetical protein;protein_id=WP_124837457.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1643039 1643503 . + . ID=gene-NIV78_RS24090;Name=NIV78_RS24090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24090 NZ_CP100137.1 Protein Homology CDS 1643039 1643503 . + 0 ID=cds-WP_012733742.1;Parent=gene-NIV78_RS24090;Dbxref=Genbank:WP_012733742.1;Name=WP_012733742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877356.1;locus_tag=NIV78_RS24090;product=GNAT family N-acetyltransferase;protein_id=WP_012733742.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1643825 1645153 . - . ID=gene-NIV78_RS24095;Name=NIV78_RS24095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24095 NZ_CP100137.1 Protein Homology CDS 1643825 1645153 . - 0 ID=cds-WP_012733741.1;Parent=gene-NIV78_RS24095;Dbxref=Genbank:WP_012733741.1;Name=WP_012733741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733741.1;locus_tag=NIV78_RS24095;product=FAD-binding oxidoreductase;protein_id=WP_012733741.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1645190 1645966 . - . ID=gene-NIV78_RS24100;Name=NIV78_RS24100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24100 NZ_CP100137.1 Protein Homology CDS 1645190 1645966 . - 0 ID=cds-WP_043225017.1;Parent=gene-NIV78_RS24100;Dbxref=Genbank:WP_043225017.1;Name=WP_043225017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733740.1;locus_tag=NIV78_RS24100;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_043225017.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1645975 1646631 . - . ID=gene-NIV78_RS24105;Name=NIV78_RS24105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24105 NZ_CP100137.1 Protein Homology CDS 1645975 1646631 . - 0 ID=cds-WP_012733739.1;Parent=gene-NIV78_RS24105;Dbxref=Genbank:WP_012733739.1;Name=WP_012733739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733739.1;locus_tag=NIV78_RS24105;product=amino acid ABC transporter permease;protein_id=WP_012733739.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1646863 1647669 . - . ID=gene-NIV78_RS24110;Name=NIV78_RS24110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24110 NZ_CP100137.1 Protein Homology CDS 1646863 1647669 . - 0 ID=cds-WP_017424473.1;Parent=gene-NIV78_RS24110;Dbxref=Genbank:WP_017424473.1;Name=WP_017424473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424473.1;locus_tag=NIV78_RS24110;product=ABC transporter substrate-binding protein;protein_id=WP_017424473.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1647789 1649282 . - . ID=gene-NIV78_RS24115;Name=NIV78_RS24115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24115 NZ_CP100137.1 Protein Homology CDS 1647789 1649282 . - 0 ID=cds-WP_017922582.1;Parent=gene-NIV78_RS24115;Dbxref=Genbank:WP_017922582.1;Name=WP_017922582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424472.1;locus_tag=NIV78_RS24115;product=aldehyde dehydrogenase family protein;protein_id=WP_017922582.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1649627 1650241 . - . ID=gene-NIV78_RS24120;Name=NIV78_RS24120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24120 NZ_CP100137.1 Protein Homology CDS 1649627 1650241 . - 0 ID=cds-WP_012733736.1;Parent=gene-NIV78_RS24120;Dbxref=Genbank:WP_012733736.1;Name=WP_012733736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424471.1;locus_tag=NIV78_RS24120;product=cupin domain-containing protein;protein_id=WP_012733736.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1650505 1651389 . + . ID=gene-NIV78_RS24125;Name=NIV78_RS24125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24125 NZ_CP100137.1 Protein Homology CDS 1650505 1651389 . + 0 ID=cds-WP_257757455.1;Parent=gene-NIV78_RS24125;Dbxref=Genbank:WP_257757455.1;Name=WP_257757455.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733735.1;locus_tag=NIV78_RS24125;product=GNAT family N-acetyltransferase;protein_id=WP_257757455.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1651617 1653095 . + . ID=gene-NIV78_RS24130;Name=NIV78_RS24130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24130 NZ_CP100137.1 Protein Homology CDS 1651617 1653095 . + 0 ID=cds-WP_017922581.1;Parent=gene-NIV78_RS24130;Dbxref=Genbank:WP_017922581.1;Name=WP_017922581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014619785.1;locus_tag=NIV78_RS24130;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_017922581.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1653092 1654090 . + . ID=gene-NIV78_RS24135;Name=NIV78_RS24135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24135 NZ_CP100137.1 Protein Homology CDS 1653092 1654090 . + 0 ID=cds-WP_017922580.1;Parent=gene-NIV78_RS24135;Dbxref=Genbank:WP_017922580.1;Name=WP_017922580.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733733.1;locus_tag=NIV78_RS24135;product=succinylglutamate desuccinylase/aspartoacylase family protein;protein_id=WP_017922580.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1654087 1654878 . + . ID=gene-NIV78_RS24140;Name=NIV78_RS24140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24140 NZ_CP100137.1 Protein Homology CDS 1654087 1654878 . + 0 ID=cds-WP_080630134.1;Parent=gene-NIV78_RS24140;Dbxref=Genbank:WP_080630134.1;Name=WP_080630134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425011.1;locus_tag=NIV78_RS24140;product=cupin domain-containing protein;protein_id=WP_080630134.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1655014 1656807 . + . ID=gene-NIV78_RS24145;Name=NIV78_RS24145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24145 NZ_CP100137.1 Protein Homology CDS 1655014 1656807 . + 0 ID=cds-WP_012733732.1;Parent=gene-NIV78_RS24145;Dbxref=Genbank:WP_012733732.1;Name=WP_012733732.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011489119.1;locus_tag=NIV78_RS24145;product=methyl-accepting chemotaxis protein;protein_id=WP_012733732.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1656992 1657888 . - . ID=gene-NIV78_RS24150;Name=NIV78_RS24150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24150 NZ_CP100137.1 Protein Homology CDS 1656992 1657888 . - 0 ID=cds-WP_153478755.1;Parent=gene-NIV78_RS24150;Dbxref=Genbank:WP_153478755.1;Name=WP_153478755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733731.1;locus_tag=NIV78_RS24150;product=hypothetical protein;protein_id=WP_153478755.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 1658292 1658666 . + . ID=gene-NIV78_RS24155;Name=NIV78_RS24155;end_range=1658666,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS24155;partial=true;pseudo=true NZ_CP100137.1 Protein Homology CDS 1658292 1658666 . + 0 ID=cds-NIV78_RS24155;Parent=gene-NIV78_RS24155;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857;end_range=1658666,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733251.1;locus_tag=NIV78_RS24155;partial=true;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP100137.1 RefSeq gene 1658862 1659449 . + . ID=gene-NIV78_RS24160;Name=NIV78_RS24160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24160 NZ_CP100137.1 Protein Homology CDS 1658862 1659449 . + 0 ID=cds-WP_257441813.1;Parent=gene-NIV78_RS24160;Dbxref=Genbank:WP_257441813.1;Name=WP_257441813.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020976.2;locus_tag=NIV78_RS24160;product=alkaline phosphatase D family protein;protein_id=WP_257441813.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1659583 1659816 . - . ID=gene-NIV78_RS24165;Name=NIV78_RS24165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24165 NZ_CP100137.1 Protein Homology CDS 1659583 1659816 . - 0 ID=cds-WP_043228244.1;Parent=gene-NIV78_RS24165;Dbxref=Genbank:WP_043228244.1;Name=WP_043228244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733730.1;locus_tag=NIV78_RS24165;product=hypothetical protein;protein_id=WP_043228244.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 1660416 1660903 . + . ID=gene-NIV78_RS24170;Name=NIV78_RS24170;end_range=1660903,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS24170;partial=true;pseudo=true NZ_CP100137.1 Protein Homology CDS 1660416 1660903 . + 0 ID=cds-NIV78_RS24170;Parent=gene-NIV78_RS24170;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1660903,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492354.1;locus_tag=NIV78_RS24170;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP100137.1 RefSeq gene 1660927 1661664 . + . ID=gene-NIV78_RS24175;Name=NIV78_RS24175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24175 NZ_CP100137.1 Protein Homology CDS 1660927 1661664 . + 0 ID=cds-WP_251107903.1;Parent=gene-NIV78_RS24175;Dbxref=Genbank:WP_251107903.1;Name=WP_251107903.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405231.1;locus_tag=NIV78_RS24175;product=IS6 family transposase;protein_id=WP_251107903.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1661777 1663186 . - . ID=gene-NIV78_RS24180;Name=NIV78_RS24180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24180 NZ_CP100137.1 Protein Homology CDS 1661777 1663186 . - 0 ID=cds-WP_017923060.1;Parent=gene-NIV78_RS24180;Dbxref=Genbank:WP_017923060.1;Name=WP_017923060.1;Ontology_term=GO:0009423,GO:0003849;gbkey=CDS;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733727.1;locus_tag=NIV78_RS24180;product=3-deoxy-7-phosphoheptulonate synthase class II;protein_id=WP_017923060.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1663268 1664293 . - . ID=gene-NIV78_RS24185;Name=NIV78_RS24185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24185 NZ_CP100137.1 Protein Homology CDS 1663268 1664293 . - 0 ID=cds-WP_232734597.1;Parent=gene-NIV78_RS24185;Dbxref=Genbank:WP_232734597.1;Name=WP_232734597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355177.1;locus_tag=NIV78_RS24185;product=zinc-binding dehydrogenase;protein_id=WP_232734597.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1664308 1665201 . - . ID=gene-NIV78_RS24190;Name=NIV78_RS24190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24190 NZ_CP100137.1 Protein Homology CDS 1664308 1665201 . - 0 ID=cds-WP_232252163.1;Parent=gene-NIV78_RS24190;Dbxref=Genbank:WP_232252163.1;Name=WP_232252163.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733725.1;locus_tag=NIV78_RS24190;product=SAM-dependent methyltransferase;protein_id=WP_232252163.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1665174 1665884 . - . ID=gene-NIV78_RS24195;Name=phzG;gbkey=Gene;gene=phzG;gene_biotype=protein_coding;locus_tag=NIV78_RS24195 NZ_CP100137.1 Protein Homology CDS 1665174 1665884 . - 0 ID=cds-WP_232734598.1;Parent=gene-NIV78_RS24195;Dbxref=Genbank:WP_232734598.1;Name=WP_232734598.1;Ontology_term=GO:0016682;gbkey=CDS;gene=phzG;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733724.1;locus_tag=NIV78_RS24195;product=phenazine biosynthesis FMN-dependent oxidase PhzG;protein_id=WP_232734598.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1665850 1666683 . - . ID=gene-NIV78_RS24200;Name=NIV78_RS24200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24200 NZ_CP100137.1 Protein Homology CDS 1665850 1666683 . - 0 ID=cds-WP_035980082.1;Parent=gene-NIV78_RS24200;Dbxref=Genbank:WP_035980082.1;Name=WP_035980082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003093628.1;locus_tag=NIV78_RS24200;product=PhzF family phenazine biosynthesis protein;protein_id=WP_035980082.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1667102 1669033 . - . ID=gene-NIV78_RS24205;Name=NIV78_RS24205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24205 NZ_CP100137.1 Protein Homology CDS 1667102 1669033 . - 0 ID=cds-WP_012733722.1;Parent=gene-NIV78_RS24205;Dbxref=Genbank:WP_012733722.1;Name=WP_012733722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733722.1;locus_tag=NIV78_RS24205;product=phenazine-specific anthranilate synthase component I;protein_id=WP_012733722.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1669030 1669653 . - . ID=gene-NIV78_RS24210;Name=NIV78_RS24210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24210 NZ_CP100137.1 Protein Homology CDS 1669030 1669653 . - 0 ID=cds-WP_012733721.1;Parent=gene-NIV78_RS24210;Dbxref=Genbank:WP_012733721.1;Name=WP_012733721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355172.1;locus_tag=NIV78_RS24210;product=isochorismatase family protein;protein_id=WP_012733721.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1669677 1670174 . - . ID=gene-NIV78_RS24215;Name=NIV78_RS24215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24215 NZ_CP100137.1 Protein Homology CDS 1669677 1670174 . - 0 ID=cds-WP_012733720.1;Parent=gene-NIV78_RS24215;Dbxref=Genbank:WP_012733720.1;Name=WP_012733720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733720.1;locus_tag=NIV78_RS24215;product=PhzA/PhzB family protein;protein_id=WP_012733720.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1670224 1671468 . - . ID=gene-NIV78_RS24220;Name=NIV78_RS24220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24220 NZ_CP100137.1 Protein Homology CDS 1670224 1671468 . - 0 ID=cds-WP_230674374.1;Parent=gene-NIV78_RS24220;Dbxref=Genbank:WP_230674374.1;Name=WP_230674374.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355170.1;locus_tag=NIV78_RS24220;product=acyl-CoA dehydrogenase family protein;protein_id=WP_230674374.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1672350 1673164 . + . ID=gene-NIV78_RS24225;Name=NIV78_RS24225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24225 NZ_CP100137.1 Protein Homology CDS 1672350 1672683 . + 0 ID=cds-WP_251107904.1;Parent=gene-NIV78_RS24225;Dbxref=Genbank:WP_251107904.1;Name=WP_251107904.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492354.1;locus_tag=NIV78_RS24225;product=IS5 family transposase;protein_id=WP_251107904.1;transl_table=11 NZ_CP100137.1 Protein Homology CDS 1672683 1673164 . + 2 ID=cds-WP_251107904.1;Parent=gene-NIV78_RS24225;Dbxref=Genbank:WP_251107904.1;Name=WP_251107904.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492354.1;locus_tag=NIV78_RS24225;product=IS5 family transposase;protein_id=WP_251107904.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1673341 1673553 . + . ID=gene-NIV78_RS24230;Name=NIV78_RS24230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24230 NZ_CP100137.1 Protein Homology CDS 1673341 1673553 . + 0 ID=cds-WP_012733717.1;Parent=gene-NIV78_RS24230;Dbxref=Genbank:WP_012733717.1;Name=WP_012733717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733717.1;locus_tag=NIV78_RS24230;product=DUF3311 domain-containing protein;protein_id=WP_012733717.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1673550 1675043 . + . ID=gene-NIV78_RS24235;Name=NIV78_RS24235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24235 NZ_CP100137.1 Protein Homology CDS 1673550 1675043 . + 0 ID=cds-WP_017424530.1;Parent=gene-NIV78_RS24235;Dbxref=Genbank:WP_017424530.1;Name=WP_017424530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733716.1;locus_tag=NIV78_RS24235;product=sodium:solute symporter;protein_id=WP_017424530.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1675412 1676368 . + . ID=gene-NIV78_RS24240;Name=NIV78_RS24240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24240 NZ_CP100137.1 Protein Homology CDS 1675412 1676368 . + 0 ID=cds-WP_251107905.1;Parent=gene-NIV78_RS24240;Dbxref=Genbank:WP_251107905.1;Name=WP_251107905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733715.1;locus_tag=NIV78_RS24240;product=alpha/beta hydrolase fold domain-containing protein;protein_id=WP_251107905.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1676390 1677358 . - . ID=gene-NIV78_RS24245;Name=NIV78_RS24245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24245 NZ_CP100137.1 Protein Homology CDS 1676390 1677358 . - 0 ID=cds-WP_017923917.1;Parent=gene-NIV78_RS24245;Dbxref=Genbank:WP_017923917.1;Name=WP_017923917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424529.1;locus_tag=NIV78_RS24245;product=MerR family transcriptional regulator;protein_id=WP_017923917.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1677570 1679099 . + . ID=gene-NIV78_RS24250;Name=NIV78_RS24250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24250 NZ_CP100137.1 Protein Homology CDS 1677570 1679099 . + 0 ID=cds-WP_017923918.1;Parent=gene-NIV78_RS24250;Dbxref=Genbank:WP_017923918.1;Name=WP_017923918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424528.1;locus_tag=NIV78_RS24250;product=cryptochrome/photolyase family protein;protein_id=WP_017923918.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1679154 1679888 . - . ID=gene-NIV78_RS24255;Name=NIV78_RS24255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24255 NZ_CP100137.1 Protein Homology CDS 1679154 1679888 . - 0 ID=cds-WP_017923919.1;Parent=gene-NIV78_RS24255;Dbxref=Genbank:WP_017923919.1;Name=WP_017923919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424527.1;locus_tag=NIV78_RS24255;product=GTP cyclohydrolase I;protein_id=WP_017923919.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1680316 1680882 . - . ID=gene-NIV78_RS24260;Name=NIV78_RS24260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24260 NZ_CP100137.1 Protein Homology CDS 1680316 1680882 . - 0 ID=cds-WP_012733711.1;Parent=gene-NIV78_RS24260;Dbxref=Genbank:WP_012733711.1;Name=WP_012733711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733711.1;locus_tag=NIV78_RS24260;product=DUF2878 domain-containing protein;protein_id=WP_012733711.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1680884 1681426 . - . ID=gene-NIV78_RS24265;Name=NIV78_RS24265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24265 NZ_CP100137.1 Protein Homology CDS 1680884 1681426 . - 0 ID=cds-WP_124837451.1;Parent=gene-NIV78_RS24265;Dbxref=Genbank:WP_124837451.1;Name=WP_124837451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733710.1;locus_tag=NIV78_RS24265;product=chalcone isomerase family protein;protein_id=WP_124837451.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1681428 1682642 . - . ID=gene-NIV78_RS24270;Name=NIV78_RS24270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24270 NZ_CP100137.1 Protein Homology CDS 1681428 1682642 . - 0 ID=cds-WP_012733709.1;Parent=gene-NIV78_RS24270;Dbxref=Genbank:WP_012733709.1;Name=WP_012733709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733709.1;locus_tag=NIV78_RS24270;product=cyclopropane-fatty-acyl-phospholipid synthase family protein;protein_id=WP_012733709.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1682639 1683484 . - . ID=gene-NIV78_RS24275;Name=NIV78_RS24275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24275 NZ_CP100137.1 Protein Homology CDS 1682639 1683484 . - 0 ID=cds-WP_017923874.1;Parent=gene-NIV78_RS24275;Dbxref=Genbank:WP_017923874.1;Name=WP_017923874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733708.1;locus_tag=NIV78_RS24275;product=DUF1365 domain-containing protein;protein_id=WP_017923874.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1683481 1684788 . - . ID=gene-NIV78_RS24280;Name=NIV78_RS24280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24280 NZ_CP100137.1 Protein Homology CDS 1683481 1684788 . - 0 ID=cds-WP_012733707.1;Parent=gene-NIV78_RS24280;Dbxref=Genbank:WP_012733707.1;Name=WP_012733707.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733707.1;locus_tag=NIV78_RS24280;product=FAD-dependent oxidoreductase;protein_id=WP_012733707.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1684882 1685493 . - . ID=gene-NIV78_RS24285;Name=NIV78_RS24285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24285 NZ_CP100137.1 Protein Homology CDS 1684882 1685493 . - 0 ID=cds-WP_257757463.1;Parent=gene-NIV78_RS24285;Dbxref=Genbank:WP_257757463.1;Name=WP_257757463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733706.1;locus_tag=NIV78_RS24285;product=lipocalin family protein;protein_id=WP_257757463.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1686108 1686584 . - . ID=gene-NIV78_RS24290;Name=NIV78_RS24290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24290 NZ_CP100137.1 Protein Homology CDS 1686108 1686584 . - 0 ID=cds-WP_017924966.1;Parent=gene-NIV78_RS24290;Dbxref=Genbank:WP_017924966.1;Name=WP_017924966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733705.1;locus_tag=NIV78_RS24290;product=MarR family transcriptional regulator;protein_id=WP_017924966.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1687054 1687923 . + . ID=gene-NIV78_RS24295;Name=NIV78_RS24295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24295 NZ_CP100137.1 Protein Homology CDS 1687054 1687923 . + 0 ID=cds-WP_251107906.1;Parent=gene-NIV78_RS24295;Dbxref=Genbank:WP_251107906.1;Name=WP_251107906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018434178.1;locus_tag=NIV78_RS24295;product=DUF3348 family protein;protein_id=WP_251107906.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1687934 1690468 . + . ID=gene-NIV78_RS24300;Name=NIV78_RS24300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24300 NZ_CP100137.1 Protein Homology CDS 1687934 1690468 . + 0 ID=cds-WP_251119137.1;Parent=gene-NIV78_RS24300;Dbxref=Genbank:WP_251119137.1;Name=WP_251119137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733703.1;locus_tag=NIV78_RS24300;product=DUF802 domain-containing protein;protein_id=WP_251119137.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1690465 1691175 . + . ID=gene-NIV78_RS24305;Name=NIV78_RS24305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24305 NZ_CP100137.1 Protein Homology CDS 1690465 1691175 . + 0 ID=cds-WP_251107908.1;Parent=gene-NIV78_RS24305;Dbxref=Genbank:WP_251107908.1;Name=WP_251107908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733702.1;locus_tag=NIV78_RS24305;product=OmpA family protein;protein_id=WP_251107908.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1691168 1691839 . + . ID=gene-NIV78_RS24310;Name=NIV78_RS24310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24310 NZ_CP100137.1 Protein Homology CDS 1691168 1691839 . + 0 ID=cds-WP_251107909.1;Parent=gene-NIV78_RS24310;Dbxref=Genbank:WP_251107909.1;Name=WP_251107909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494009.1;locus_tag=NIV78_RS24310;product=DUF2894 domain-containing protein;protein_id=WP_251107909.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1692193 1693770 . + . ID=gene-NIV78_RS24315;Name=NIV78_RS24315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24315 NZ_CP100137.1 Protein Homology CDS 1692193 1693770 . + 0 ID=cds-WP_257757464.1;Parent=gene-NIV78_RS24315;Dbxref=Genbank:WP_257757464.1;Name=WP_257757464.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733700.1;locus_tag=NIV78_RS24315;product=methyl-accepting chemotaxis protein;protein_id=WP_257757464.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1693870 1695186 . - . ID=gene-NIV78_RS24320;Name=NIV78_RS24320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24320 NZ_CP100137.1 Protein Homology CDS 1693870 1695186 . - 0 ID=cds-WP_251107910.1;Parent=gene-NIV78_RS24320;Dbxref=Genbank:WP_251107910.1;Name=WP_251107910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733699.1;locus_tag=NIV78_RS24320;product=tetratricopeptide repeat protein;protein_id=WP_251107910.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1695460 1718892 . - . ID=gene-NIV78_RS24325;Name=NIV78_RS24325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24325 NZ_CP100137.1 Protein Homology CDS 1695460 1718892 . - 0 ID=cds-WP_257757465.1;Parent=gene-NIV78_RS24325;Dbxref=Genbank:WP_257757465.1;Name=WP_257757465.1;Ontology_term=GO:0008610,GO:0031177;gbkey=CDS;go_function=phosphopantetheine binding|0031177||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733698.1;locus_tag=NIV78_RS24325;product=non-ribosomal peptide synthase/polyketide synthase;protein_id=WP_257757465.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1720445 1721635 . + . ID=gene-NIV78_RS24330;Name=NIV78_RS24330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24330 NZ_CP100137.1 Protein Homology CDS 1720445 1721635 . + 0 ID=cds-WP_012733697.1;Parent=gene-NIV78_RS24330;Dbxref=Genbank:WP_012733697.1;Name=WP_012733697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195141.1;locus_tag=NIV78_RS24330;product=porin;protein_id=WP_012733697.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 1721934 1723826 . + . ID=gene-NIV78_RS24335;Name=NIV78_RS24335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS24335;pseudo=true NZ_CP100137.1 Protein Homology CDS 1721934 1723826 . + 0 ID=cds-NIV78_RS24335;Parent=gene-NIV78_RS24335;Note=internal stop;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733696.1;locus_tag=NIV78_RS24335;product=methyl-accepting chemotaxis protein;pseudo=true;transl_table=11 NZ_CP100137.1 RefSeq gene 1723934 1725088 . - . ID=gene-NIV78_RS24340;Name=NIV78_RS24340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24340 NZ_CP100137.1 Protein Homology CDS 1723934 1725088 . - 0 ID=cds-WP_012733695.1;Parent=gene-NIV78_RS24340;Dbxref=Genbank:WP_012733695.1;Name=WP_012733695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733695.1;locus_tag=NIV78_RS24340;product=hypothetical protein;protein_id=WP_012733695.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1726051 1727442 . + . ID=gene-NIV78_RS24345;Name=NIV78_RS24345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24345 NZ_CP100137.1 Protein Homology CDS 1726051 1727442 . + 0 ID=cds-WP_257757466.1;Parent=gene-NIV78_RS24345;Dbxref=Genbank:WP_257757466.1;Name=WP_257757466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733694.1;locus_tag=NIV78_RS24345;product=MFS transporter;protein_id=WP_257757466.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1727874 1728071 . - . ID=gene-NIV78_RS24350;Name=NIV78_RS24350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24350 NZ_CP100137.1 GeneMarkS-2+ CDS 1727874 1728071 . - 0 ID=cds-WP_124837695.1;Parent=gene-NIV78_RS24350;Dbxref=Genbank:WP_124837695.1;Name=WP_124837695.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS24350;product=hypothetical protein;protein_id=WP_124837695.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1728057 1728917 . + . ID=gene-NIV78_RS24355;Name=NIV78_RS24355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24355 NZ_CP100137.1 Protein Homology CDS 1728057 1728917 . + 0 ID=cds-WP_017922902.1;Parent=gene-NIV78_RS24355;Dbxref=Genbank:WP_017922902.1;Name=WP_017922902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424535.1;locus_tag=NIV78_RS24355;product=phytanoyl-CoA dioxygenase family protein;protein_id=WP_017922902.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1728965 1730320 . + . ID=gene-NIV78_RS24360;Name=NIV78_RS24360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24360 NZ_CP100137.1 Protein Homology CDS 1728965 1730320 . + 0 ID=cds-WP_043225385.1;Parent=gene-NIV78_RS24360;Dbxref=Genbank:WP_043225385.1;Name=WP_043225385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733692.1;locus_tag=NIV78_RS24360;product=5-enolpyruvylshikimate-3-phosphate synthase;protein_id=WP_043225385.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1730385 1731290 . - . ID=gene-NIV78_RS24365;Name=NIV78_RS24365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24365 NZ_CP100137.1 Protein Homology CDS 1730385 1731290 . - 0 ID=cds-WP_012733691.1;Parent=gene-NIV78_RS24365;Dbxref=Genbank:WP_012733691.1;Name=WP_012733691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733691.1;locus_tag=NIV78_RS24365;product=LysR family transcriptional regulator;protein_id=WP_012733691.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1732042 1733196 . - . ID=gene-NIV78_RS24370;Name=NIV78_RS24370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24370 NZ_CP100137.1 Protein Homology CDS 1732042 1733196 . - 0 ID=cds-WP_100556208.1;Parent=gene-NIV78_RS24370;Dbxref=Genbank:WP_100556208.1;Name=WP_100556208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198207.1;locus_tag=NIV78_RS24370;product=flagellin;protein_id=WP_100556208.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1733654 1733797 . - . ID=gene-NIV78_RS24375;Name=NIV78_RS24375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24375 NZ_CP100137.1 GeneMarkS-2+ CDS 1733654 1733797 . - 0 ID=cds-WP_153478734.1;Parent=gene-NIV78_RS24375;Dbxref=Genbank:WP_153478734.1;Name=WP_153478734.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS24375;product=hypothetical protein;protein_id=WP_153478734.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1734065 1734628 . + . ID=gene-NIV78_RS24380;Name=NIV78_RS24380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24380 NZ_CP100137.1 Protein Homology CDS 1734065 1734628 . + 0 ID=cds-WP_017432960.1;Parent=gene-NIV78_RS24380;Dbxref=Genbank:WP_017432960.1;Name=WP_017432960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004548164.1;locus_tag=NIV78_RS24380;product=hypothetical protein;protein_id=WP_017432960.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1734673 1735491 . + . ID=gene-NIV78_RS24385;Name=NIV78_RS24385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24385 NZ_CP100137.1 Protein Homology CDS 1734673 1735491 . + 0 ID=cds-WP_017923266.1;Parent=gene-NIV78_RS24385;Dbxref=Genbank:WP_017923266.1;Name=WP_017923266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523032.1;locus_tag=NIV78_RS24385;product=hypothetical protein;protein_id=WP_017923266.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1735711 1736640 . + . ID=gene-NIV78_RS24390;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=NIV78_RS24390 NZ_CP100137.1 Protein Homology CDS 1735711 1736640 . + 0 ID=cds-WP_017923265.1;Parent=gene-NIV78_RS24390;Dbxref=Genbank:WP_017923265.1;Name=WP_017923265.1;Ontology_term=GO:0019303,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose catabolic process|0019303||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423726.1;locus_tag=NIV78_RS24390;product=ribokinase;protein_id=WP_017923265.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1736700 1738019 . + . ID=gene-NIV78_RS24395;Name=NIV78_RS24395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24395 NZ_CP100137.1 Protein Homology CDS 1736700 1738019 . + 0 ID=cds-WP_043225814.1;Parent=gene-NIV78_RS24395;Dbxref=Genbank:WP_043225814.1;Name=WP_043225814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689787.1;locus_tag=NIV78_RS24395;product=MFS transporter;protein_id=WP_043225814.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1738059 1739018 . + . ID=gene-NIV78_RS24400;Name=NIV78_RS24400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24400 NZ_CP100137.1 Protein Homology CDS 1738059 1739018 . + 0 ID=cds-WP_012733686.1;Parent=gene-NIV78_RS24400;Dbxref=Genbank:WP_012733686.1;Name=WP_012733686.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733686.1;locus_tag=NIV78_RS24400;product=dihydrodipicolinate synthase family protein;protein_id=WP_012733686.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1739082 1740194 . + . ID=gene-NIV78_RS24405;Name=NIV78_RS24405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24405 NZ_CP100137.1 Protein Homology CDS 1739082 1740194 . + 0 ID=cds-WP_232734642.1;Parent=gene-NIV78_RS24405;Dbxref=Genbank:WP_232734642.1;Name=WP_232734642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689785.1;locus_tag=NIV78_RS24405;product=substrate-binding domain-containing protein;protein_id=WP_232734642.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1740680 1741930 . + . ID=gene-NIV78_RS24410;Name=NIV78_RS24410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24410 NZ_CP100137.1 Protein Homology CDS 1740680 1741930 . + 0 ID=cds-WP_012733684.1;Parent=gene-NIV78_RS24410;Dbxref=Genbank:WP_012733684.1;Name=WP_012733684.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.2;locus_tag=NIV78_RS24410;product=MFS transporter;protein_id=WP_012733684.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1741927 1742589 . + . ID=gene-NIV78_RS24415;Name=NIV78_RS24415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24415 NZ_CP100137.1 Protein Homology CDS 1741927 1742589 . + 0 ID=cds-WP_012733683.1;Parent=gene-NIV78_RS24415;Dbxref=Genbank:WP_012733683.1;Name=WP_012733683.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733683.1;locus_tag=NIV78_RS24415;product=HAD-IA family hydrolase;protein_id=WP_012733683.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1742946 1743404 . - . ID=gene-NIV78_RS24420;Name=NIV78_RS24420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24420 NZ_CP100137.1 GeneMarkS-2+ CDS 1742946 1743404 . - 0 ID=cds-WP_017923452.1;Parent=gene-NIV78_RS24420;Dbxref=Genbank:WP_017923452.1;Name=WP_017923452.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS24420;product=hypothetical protein;protein_id=WP_017923452.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1743577 1743807 . - . ID=gene-NIV78_RS24425;Name=NIV78_RS24425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24425 NZ_CP100137.1 GeneMarkS-2+ CDS 1743577 1743807 . - 0 ID=cds-WP_153478730.1;Parent=gene-NIV78_RS24425;Dbxref=Genbank:WP_153478730.1;Name=WP_153478730.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS24425;product=hypothetical protein;protein_id=WP_153478730.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 1744215 1745018 . + . ID=gene-NIV78_RS24430;Name=NIV78_RS24430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS24430;partial=true;pseudo=true;start_range=.,1744215 NZ_CP100137.1 Protein Homology CDS 1744215 1745018 . + 0 ID=cds-NIV78_RS24430;Parent=gene-NIV78_RS24430;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612082.1;locus_tag=NIV78_RS24430;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1744215;transl_table=11 NZ_CP100137.1 RefSeq gene 1745104 1745547 . - . ID=gene-NIV78_RS24435;Name=NIV78_RS24435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24435 NZ_CP100137.1 Protein Homology CDS 1745104 1745547 . - 0 ID=cds-WP_257757470.1;Parent=gene-NIV78_RS24435;Dbxref=Genbank:WP_257757470.1;Name=WP_257757470.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012635.2;locus_tag=NIV78_RS24435;product=type 1 fimbrial protein;protein_id=WP_257757470.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1745730 1746967 . - . ID=gene-NIV78_RS24440;Name=NIV78_RS24440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24440 NZ_CP100137.1 Protein Homology CDS 1746676 1746967 . - 0 ID=cds-WP_088499505.1-4;Parent=gene-NIV78_RS24440;Dbxref=Genbank:WP_088499505.1;Name=WP_088499505.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558218.1;locus_tag=NIV78_RS24440;product=IS3 family transposase;protein_id=WP_088499505.1;transl_table=11 NZ_CP100137.1 Protein Homology CDS 1745730 1746676 . - 2 ID=cds-WP_088499505.1-4;Parent=gene-NIV78_RS24440;Dbxref=Genbank:WP_088499505.1;Name=WP_088499505.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558218.1;locus_tag=NIV78_RS24440;product=IS3 family transposase;protein_id=WP_088499505.1;transl_table=11 NZ_CP100137.1 cmsearch sequence_feature 1746570 1746686 . - . ID=id-NIV78_RS24440;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS24440 NZ_CP100137.1 RefSeq gene 1747091 1747528 . - . ID=gene-NIV78_RS24445;Name=NIV78_RS24445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24445 NZ_CP100137.1 GeneMarkS-2+ CDS 1747091 1747528 . - 0 ID=cds-WP_159372664.1;Parent=gene-NIV78_RS24445;Dbxref=Genbank:WP_159372664.1;Name=WP_159372664.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS24445;product=SMI1/KNR4 family protein;protein_id=WP_159372664.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1747525 1752201 . - . ID=gene-NIV78_RS24450;Name=NIV78_RS24450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24450 NZ_CP100137.1 Protein Homology CDS 1747525 1752201 . - 0 ID=cds-WP_257757471.1;Parent=gene-NIV78_RS24450;Dbxref=Genbank:WP_257757471.1;Name=WP_257757471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350751.1;locus_tag=NIV78_RS24450;product=DUF6531 domain-containing protein;protein_id=WP_257757471.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1752574 1754040 . + . ID=gene-NIV78_RS24455;Name=NIV78_RS24455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24455 NZ_CP100137.1 Protein Homology CDS 1752574 1754040 . + 0 ID=cds-WP_198292469.1-3;Parent=gene-NIV78_RS24455;Dbxref=Genbank:WP_198292469.1;Name=WP_198292469.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763800.1;locus_tag=NIV78_RS24455;product=ISNCY family transposase;protein_id=WP_198292469.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 1754208 1755073 . - . ID=gene-NIV78_RS24460;Name=NIV78_RS24460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS24460;partial=true;pseudo=true;start_range=.,1754208 NZ_CP100137.1 Protein Homology CDS 1754208 1755073 . - 0 ID=cds-NIV78_RS24460;Parent=gene-NIV78_RS24460;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611495.1;locus_tag=NIV78_RS24460;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1754208;transl_table=11 NZ_CP100137.1 RefSeq gene 1755171 1757018 . - . ID=gene-NIV78_RS24465;Name=NIV78_RS24465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24465 NZ_CP100137.1 Protein Homology CDS 1755171 1757018 . - 0 ID=cds-WP_080630155.1;Parent=gene-NIV78_RS24465;Dbxref=Genbank:WP_080630155.1;Name=WP_080630155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877384.1;locus_tag=NIV78_RS24465;product=clostripain-related cysteine peptidase;protein_id=WP_080630155.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1757536 1758105 . - . ID=gene-NIV78_RS24470;Name=NIV78_RS24470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24470 NZ_CP100137.1 Protein Homology CDS 1757536 1758105 . - 0 ID=cds-WP_017922729.1;Parent=gene-NIV78_RS24470;Dbxref=Genbank:WP_017922729.1;Name=WP_017922729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877385.1;locus_tag=NIV78_RS24470;product=hypothetical protein;protein_id=WP_017922729.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1758123 1759367 . - . ID=gene-NIV78_RS24475;Name=NIV78_RS24475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24475 NZ_CP100137.1 Protein Homology CDS 1758123 1759367 . - 0 ID=cds-WP_017423685.1;Parent=gene-NIV78_RS24475;Dbxref=Genbank:WP_017423685.1;Name=WP_017423685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423685.1;locus_tag=NIV78_RS24475;product=hypothetical protein;protein_id=WP_017423685.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1759364 1760137 . - . ID=gene-NIV78_RS24480;Name=NIV78_RS24480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24480 NZ_CP100137.1 Protein Homology CDS 1759364 1760137 . - 0 ID=cds-WP_017423686.1;Parent=gene-NIV78_RS24480;Dbxref=Genbank:WP_017423686.1;Name=WP_017423686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423686.1;locus_tag=NIV78_RS24480;product=hypothetical protein;protein_id=WP_017423686.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1760595 1761158 . + . ID=gene-NIV78_RS24485;Name=NIV78_RS24485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24485 NZ_CP100137.1 GeneMarkS-2+ CDS 1760595 1761158 . + 0 ID=cds-WP_017922730.1;Parent=gene-NIV78_RS24485;Dbxref=Genbank:WP_017922730.1;Name=WP_017922730.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS24485;product=hypothetical protein;protein_id=WP_017922730.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1762020 1763429 . - . ID=gene-NIV78_RS24490;Name=NIV78_RS24490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24490 NZ_CP100137.1 Protein Homology CDS 1762020 1763429 . - 0 ID=cds-WP_017922732.1;Parent=gene-NIV78_RS24490;Dbxref=Genbank:WP_017922732.1;Name=WP_017922732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877388.1;locus_tag=NIV78_RS24490;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_017922732.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1763821 1765047 . - . ID=gene-NIV78_RS24495;Name=NIV78_RS24495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24495 NZ_CP100137.1 Protein Homology CDS 1763821 1765047 . - 0 ID=cds-WP_020379688.1;Parent=gene-NIV78_RS24495;Dbxref=Genbank:WP_020379688.1;Name=WP_020379688.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877389.1;locus_tag=NIV78_RS24495;product=cyanate transporter;protein_id=WP_020379688.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1765112 1765276 . - . ID=gene-NIV78_RS24500;Name=NIV78_RS24500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24500 NZ_CP100137.1 Protein Homology CDS 1765112 1765276 . - 0 ID=cds-WP_017423690.1;Parent=gene-NIV78_RS24500;Dbxref=Genbank:WP_017423690.1;Name=WP_017423690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423690.1;locus_tag=NIV78_RS24500;product=hypothetical protein;protein_id=WP_017423690.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1765485 1766504 . + . ID=gene-NIV78_RS24505;Name=NIV78_RS24505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24505 NZ_CP100137.1 GeneMarkS-2+ CDS 1765485 1766504 . + 0 ID=cds-WP_257757475.1;Parent=gene-NIV78_RS24505;Dbxref=Genbank:WP_257757475.1;Name=WP_257757475.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS24505;product=hypothetical protein;protein_id=WP_257757475.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1766417 1767769 . - . ID=gene-NIV78_RS24510;Name=NIV78_RS24510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24510 NZ_CP100137.1 Protein Homology CDS 1766417 1767769 . - 0 ID=cds-WP_085967285.1;Parent=gene-NIV78_RS24510;Dbxref=Genbank:WP_085967285.1;Name=WP_085967285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010099902.1;locus_tag=NIV78_RS24510;product=aspartate aminotransferase family protein;protein_id=WP_085967285.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1767873 1768919 . + . ID=gene-NIV78_RS24515;Name=NIV78_RS24515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24515 NZ_CP100137.1 Protein Homology CDS 1767873 1768919 . + 0 ID=cds-WP_017423694.1;Parent=gene-NIV78_RS24515;Dbxref=Genbank:WP_017423694.1;Name=WP_017423694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423694.1;locus_tag=NIV78_RS24515;product=LysR family transcriptional regulator;protein_id=WP_017423694.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1768976 1770874 . - . ID=gene-NIV78_RS24520;Name=NIV78_RS24520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24520 NZ_CP100137.1 Protein Homology CDS 1768976 1770874 . - 0 ID=cds-WP_251107804.1;Parent=gene-NIV78_RS24520;Dbxref=Genbank:WP_251107804.1;Name=WP_251107804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423695.1;locus_tag=NIV78_RS24520;product=prolyl oligopeptidase family serine peptidase;protein_id=WP_251107804.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1771007 1771960 . - . ID=gene-NIV78_RS24525;Name=NIV78_RS24525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24525 NZ_CP100137.1 Protein Homology CDS 1771007 1771960 . - 0 ID=cds-WP_251107803.1;Parent=gene-NIV78_RS24525;Dbxref=Genbank:WP_251107803.1;Name=WP_251107803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423696.1;locus_tag=NIV78_RS24525;product=LysR substrate-binding domain-containing protein;protein_id=WP_251107803.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 1772225 1772963 . + . ID=gene-NIV78_RS24530;Name=NIV78_RS24530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS24530;pseudo=true NZ_CP100137.1 Protein Homology CDS 1772225 1772963 . + 0 ID=cds-NIV78_RS24530;Parent=gene-NIV78_RS24530;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877394.1;locus_tag=NIV78_RS24530;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 NZ_CP100137.1 RefSeq gene 1773006 1774145 . - . ID=gene-NIV78_RS24535;Name=NIV78_RS24535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24535 NZ_CP100137.1 Protein Homology CDS 1773006 1774145 . - 0 ID=cds-WP_039205372.1;Parent=gene-NIV78_RS24535;Dbxref=Genbank:WP_039205372.1;Name=WP_039205372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877395.1;locus_tag=NIV78_RS24535;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_039205372.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1775000 1775680 . + . ID=gene-NIV78_RS24540;Name=NIV78_RS24540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24540 NZ_CP100137.1 Protein Homology CDS 1775000 1775680 . + 0 ID=cds-WP_015877396.1;Parent=gene-NIV78_RS24540;Dbxref=Genbank:WP_015877396.1;Name=WP_015877396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603979.1;locus_tag=NIV78_RS24540;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_015877396.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1775677 1776474 . + . ID=gene-NIV78_RS24545;Name=NIV78_RS24545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24545 NZ_CP100137.1 Protein Homology CDS 1775677 1776474 . + 0 ID=cds-WP_017923318.1;Parent=gene-NIV78_RS24545;Dbxref=Genbank:WP_017923318.1;Name=WP_017923318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877397.1;locus_tag=NIV78_RS24545;product=2OG-Fe(II) oxygenase;protein_id=WP_017923318.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1776471 1777469 . + . ID=gene-NIV78_RS24550;Name=NIV78_RS24550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24550 NZ_CP100137.1 Protein Homology CDS 1776471 1777469 . + 0 ID=cds-WP_015877398.1;Parent=gene-NIV78_RS24550;Dbxref=Genbank:WP_015877398.1;Name=WP_015877398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399831.1;locus_tag=NIV78_RS24550;product=HpnL family protein;protein_id=WP_015877398.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1777517 1778284 . + . ID=gene-NIV78_RS24555;Name=NIV78_RS24555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24555 NZ_CP100137.1 Protein Homology CDS 1777517 1778284 . + 0 ID=cds-WP_017423873.1;Parent=gene-NIV78_RS24555;Dbxref=Genbank:WP_017423873.1;Name=WP_017423873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603691.1;locus_tag=NIV78_RS24555;product=phosphocholine cytidylyltransferase family protein;protein_id=WP_017423873.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1778281 1779966 . + . ID=gene-NIV78_RS24560;Name=aepX;gbkey=Gene;gene=aepX;gene_biotype=protein_coding;locus_tag=NIV78_RS24560 NZ_CP100137.1 Protein Homology CDS 1778281 1779966 . + 0 ID=cds-WP_015877400.1;Parent=gene-NIV78_RS24560;Dbxref=Genbank:WP_015877400.1;Name=WP_015877400.1;Ontology_term=GO:0019634,GO:0050188;gbkey=CDS;gene=aepX;go_function=phosphoenolpyruvate mutase activity|0050188||IEA;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329754.1;locus_tag=NIV78_RS24560;product=phosphoenolpyruvate mutase;protein_id=WP_015877400.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1779963 1781114 . + . ID=gene-NIV78_RS24565;Name=aepY;gbkey=Gene;gene=aepY;gene_biotype=protein_coding;locus_tag=NIV78_RS24565 NZ_CP100137.1 Protein Homology CDS 1779963 1781114 . + 0 ID=cds-WP_017923319.1;Parent=gene-NIV78_RS24565;Dbxref=Genbank:WP_017923319.1;Name=WP_017923319.1;Ontology_term=GO:0017000,GO:0033980;gbkey=CDS;gene=aepY;go_function=phosphonopyruvate decarboxylase activity|0033980||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877401.1;locus_tag=NIV78_RS24565;product=phosphonopyruvate decarboxylase;protein_id=WP_017923319.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1781114 1782181 . + . ID=gene-NIV78_RS24570;Name=NIV78_RS24570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24570 NZ_CP100137.1 Protein Homology CDS 1781114 1782181 . + 0 ID=cds-WP_015877402.1;Parent=gene-NIV78_RS24570;Dbxref=Genbank:WP_015877402.1;Name=WP_015877402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187270.1;locus_tag=NIV78_RS24570;product=2-aminoethylphosphonate aminotransferase;protein_id=WP_015877402.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1782425 1783495 . + . ID=gene-NIV78_RS24575;Name=NIV78_RS24575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24575 NZ_CP100137.1 Protein Homology CDS 1782425 1783495 . + 0 ID=cds-WP_015877403.1;Parent=gene-NIV78_RS24575;Dbxref=Genbank:WP_015877403.1;Name=WP_015877403.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690106.1;locus_tag=NIV78_RS24575;product=FUSC family protein;protein_id=WP_015877403.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1783680 1784474 . - . ID=gene-NIV78_RS24580;Name=NIV78_RS24580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24580 NZ_CP100137.1 Protein Homology CDS 1783680 1784474 . - 0 ID=cds-WP_251107802.1;Parent=gene-NIV78_RS24580;Dbxref=Genbank:WP_251107802.1;Name=WP_251107802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020379706.1;locus_tag=NIV78_RS24580;product=hypothetical protein;protein_id=WP_251107802.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1784810 1785745 . + . ID=gene-NIV78_RS24585;Name=pip;gbkey=Gene;gene=pip;gene_biotype=protein_coding;locus_tag=NIV78_RS24585 NZ_CP100137.1 Protein Homology CDS 1784810 1785745 . + 0 ID=cds-WP_015877405.1;Parent=gene-NIV78_RS24585;Dbxref=Genbank:WP_015877405.1;Name=WP_015877405.1;Ontology_term=GO:0030163,GO:0004177;gbkey=CDS;gene=pip;go_function=aminopeptidase activity|0004177||IEA;go_process=protein catabolic process|0030163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877405.1;locus_tag=NIV78_RS24585;product=prolyl aminopeptidase;protein_id=WP_015877405.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1785860 1786480 . + . ID=gene-NIV78_RS24590;Name=NIV78_RS24590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24590 NZ_CP100137.1 Protein Homology CDS 1785860 1786480 . + 0 ID=cds-WP_015877406.1;Parent=gene-NIV78_RS24590;Dbxref=Genbank:WP_015877406.1;Name=WP_015877406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877406.1;locus_tag=NIV78_RS24590;product=hemolysin III family protein;protein_id=WP_015877406.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1786593 1787108 . - . ID=gene-NIV78_RS24595;Name=NIV78_RS24595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24595 NZ_CP100137.1 Protein Homology CDS 1786593 1787108 . - 0 ID=cds-WP_230674385.1;Parent=gene-NIV78_RS24595;Dbxref=Genbank:WP_230674385.1;Name=WP_230674385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405150.1;locus_tag=NIV78_RS24595;product=BON domain-containing protein;protein_id=WP_230674385.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1787401 1787991 . + . ID=gene-NIV78_RS24600;Name=NIV78_RS24600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24600 NZ_CP100137.1 Protein Homology CDS 1787401 1787991 . + 0 ID=cds-WP_015877408.1;Parent=gene-NIV78_RS24600;Dbxref=Genbank:WP_015877408.1;Name=WP_015877408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690098.1;locus_tag=NIV78_RS24600;product=type 1 glutamine amidotransferase;protein_id=WP_015877408.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1787991 1789166 . + . ID=gene-NIV78_RS24605;Name=NIV78_RS24605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24605 NZ_CP100137.1 Protein Homology CDS 1787991 1789166 . + 0 ID=cds-WP_232734613.1;Parent=gene-NIV78_RS24605;Dbxref=Genbank:WP_232734613.1;Name=WP_232734613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877409.1;locus_tag=NIV78_RS24605;product=DNA topoisomerase IB;protein_id=WP_232734613.1;transl_table=11 NZ_CP100137.1 cmsearch riboswitch 1789217 1789325 . + . ID=id-NZ_CP100137.1:1789217..1789325;Dbxref=RFAM:RF01725;Note=SAM-I-IV-variant riboswitch%3B SAM riboswitches modulate the expression of downstream genes in response to levels of S-adenosylmethionine;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP100137.1 RefSeq gene 1789369 1789746 . + . ID=gene-NIV78_RS24610;Name=NIV78_RS24610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24610 NZ_CP100137.1 GeneMarkS-2+ CDS 1789369 1789746 . + 0 ID=cds-WP_017924983.1;Parent=gene-NIV78_RS24610;Dbxref=Genbank:WP_017924983.1;Name=WP_017924983.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS24610;product=hypothetical protein;protein_id=WP_017924983.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1789840 1790721 . - . ID=gene-NIV78_RS24615;Name=NIV78_RS24615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24615 NZ_CP100137.1 Protein Homology CDS 1789840 1790721 . - 0 ID=cds-WP_015877411.1;Parent=gene-NIV78_RS24615;Dbxref=Genbank:WP_015877411.1;Name=WP_015877411.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877411.1;locus_tag=NIV78_RS24615;product=PhzF family phenazine biosynthesis protein;protein_id=WP_015877411.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1791116 1792336 . - . ID=gene-NIV78_RS24620;Name=NIV78_RS24620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24620 NZ_CP100137.1 Protein Homology CDS 1791116 1792336 . - 0 ID=cds-WP_257757481.1;Parent=gene-NIV78_RS24620;Dbxref=Genbank:WP_257757481.1;Name=WP_257757481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877413.1;locus_tag=NIV78_RS24620;product=transglutaminase family protein;protein_id=WP_257757481.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1792327 1794942 . - . ID=gene-NIV78_RS24625;Name=NIV78_RS24625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24625 NZ_CP100137.1 Protein Homology CDS 1792327 1794942 . - 0 ID=cds-WP_035984398.1;Parent=gene-NIV78_RS24625;Dbxref=Genbank:WP_035984398.1;Name=WP_035984398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893802.1;locus_tag=NIV78_RS24625;product=circularly permuted type 2 ATP-grasp protein;protein_id=WP_035984398.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1795134 1798601 . - . ID=gene-NIV78_RS24630;Name=NIV78_RS24630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24630 NZ_CP100137.1 Protein Homology CDS 1795134 1798601 . - 0 ID=cds-WP_015877415.1;Parent=gene-NIV78_RS24630;Dbxref=Genbank:WP_015877415.1;Name=WP_015877415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877415.1;locus_tag=NIV78_RS24630;product=transglutaminase family protein;protein_id=WP_015877415.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1798888 1799832 . - . ID=gene-NIV78_RS24635;Name=NIV78_RS24635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24635 NZ_CP100137.1 Protein Homology CDS 1798888 1799832 . - 0 ID=cds-WP_017923291.1;Parent=gene-NIV78_RS24635;Dbxref=Genbank:WP_017923291.1;Name=WP_017923291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019256490.1;locus_tag=NIV78_RS24635;product=transglutaminase family protein;protein_id=WP_017923291.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1799843 1800784 . - . ID=gene-NIV78_RS24640;Name=NIV78_RS24640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24640 NZ_CP100137.1 Protein Homology CDS 1799843 1800784 . - 0 ID=cds-WP_015877417.1;Parent=gene-NIV78_RS24640;Dbxref=Genbank:WP_015877417.1;Name=WP_015877417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010108140.1;locus_tag=NIV78_RS24640;product=alpha-E domain-containing protein;protein_id=WP_015877417.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1800879 1802294 . - . ID=gene-NIV78_RS24645;Name=NIV78_RS24645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24645 NZ_CP100137.1 Protein Homology CDS 1800879 1802294 . - 0 ID=cds-WP_015877418.1;Parent=gene-NIV78_RS24645;Dbxref=Genbank:WP_015877418.1;Name=WP_015877418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877418.1;locus_tag=NIV78_RS24645;product=circularly permuted type 2 ATP-grasp protein;protein_id=WP_015877418.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1802291 1802548 . - . ID=gene-NIV78_RS24650;Name=NIV78_RS24650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24650 NZ_CP100137.1 GeneMarkS-2+ CDS 1802291 1802548 . - 0 ID=cds-WP_257757483.1;Parent=gene-NIV78_RS24650;Dbxref=Genbank:WP_257757483.1;Name=WP_257757483.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS24650;product=hypothetical protein;protein_id=WP_257757483.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1802956 1803450 . + . ID=gene-NIV78_RS24655;Name=NIV78_RS24655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24655 NZ_CP100137.1 Protein Homology CDS 1802956 1803450 . + 0 ID=cds-WP_015877419.1;Parent=gene-NIV78_RS24655;Dbxref=Genbank:WP_015877419.1;Name=WP_015877419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877419.1;locus_tag=NIV78_RS24655;product=hypothetical protein;protein_id=WP_015877419.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1803478 1804197 . - . ID=gene-NIV78_RS24660;Name=NIV78_RS24660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24660 NZ_CP100137.1 Protein Homology CDS 1803478 1804197 . - 0 ID=cds-WP_017922795.1;Parent=gene-NIV78_RS24660;Dbxref=Genbank:WP_017922795.1;Name=WP_017922795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877420.1;locus_tag=NIV78_RS24660;product=UPF0149 family protein;protein_id=WP_017922795.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1804806 1805369 . + . ID=gene-NIV78_RS24665;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=NIV78_RS24665 NZ_CP100137.1 Protein Homology CDS 1804806 1805369 . + 0 ID=cds-WP_015877421.1;Parent=gene-NIV78_RS24665;Dbxref=Genbank:WP_015877421.1;Name=WP_015877421.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329783.1;locus_tag=NIV78_RS24665;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_015877421.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1805488 1807080 . + . ID=gene-NIV78_RS24670;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=NIV78_RS24670 NZ_CP100137.1 Protein Homology CDS 1805488 1807080 . + 0 ID=cds-WP_017423404.1;Parent=gene-NIV78_RS24670;Dbxref=Genbank:WP_017423404.1;Name=WP_017423404.1;Ontology_term=GO:0006805,GO:0009398,GO:0016668;gbkey=CDS;gene=ahpF;go_function=oxidoreductase activity%2C acting on a sulfur group of donors%2C NAD(P) as acceptor|0016668||IEA;go_process=xenobiotic metabolic process|0006805||IEA,FMN biosynthetic process|0009398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488688.1;locus_tag=NIV78_RS24670;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_017423404.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1807571 1808476 . + . ID=gene-NIV78_RS24675;Name=NIV78_RS24675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24675 NZ_CP100137.1 Protein Homology CDS 1807571 1808476 . + 0 ID=cds-WP_017922794.1;Parent=gene-NIV78_RS24675;Dbxref=Genbank:WP_017922794.1;Name=WP_017922794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877423.1;locus_tag=NIV78_RS24675;product=LysR family transcriptional regulator;protein_id=WP_017922794.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1808511 1808882 . - . ID=gene-NIV78_RS24680;Name=NIV78_RS24680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24680 NZ_CP100137.1 Protein Homology CDS 1808511 1808882 . - 0 ID=cds-WP_017423403.1;Parent=gene-NIV78_RS24680;Dbxref=Genbank:WP_017423403.1;Name=WP_017423403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495095.1;locus_tag=NIV78_RS24680;product=MAPEG family protein;protein_id=WP_017423403.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1809059 1810129 . - . ID=gene-NIV78_RS24685;Name=NIV78_RS24685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24685 NZ_CP100137.1 Protein Homology CDS 1809059 1810129 . - 0 ID=cds-WP_017922793.1;Parent=gene-NIV78_RS24685;Dbxref=Genbank:WP_017922793.1;Name=WP_017922793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423402.1;locus_tag=NIV78_RS24685;product=L-idonate 5-dehydrogenase;protein_id=WP_017922793.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1810187 1810960 . - . ID=gene-NIV78_RS24690;Name=NIV78_RS24690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24690 NZ_CP100137.1 Protein Homology CDS 1810187 1810960 . - 0 ID=cds-WP_017423401.1;Parent=gene-NIV78_RS24690;Dbxref=Genbank:WP_017423401.1;Name=WP_017423401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877426.1;locus_tag=NIV78_RS24690;product=SDR family oxidoreductase;protein_id=WP_017423401.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1811117 1812133 . - . ID=gene-NIV78_RS24695;Name=NIV78_RS24695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24695 NZ_CP100137.1 Protein Homology CDS 1811117 1812133 . - 0 ID=cds-WP_026051386.1;Parent=gene-NIV78_RS24695;Dbxref=Genbank:WP_026051386.1;Name=WP_026051386.1;Ontology_term=GO:0042217,GO:0008660;gbkey=CDS;go_function=1-aminocyclopropane-1-carboxylate deaminase activity|0008660||IEA;go_process=1-aminocyclopropane-1-carboxylate catabolic process|0042217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010099870.1;locus_tag=NIV78_RS24695;product=1-aminocyclopropane-1-carboxylate deaminase;protein_id=WP_026051386.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1812327 1812842 . + . ID=gene-NIV78_RS24700;Name=NIV78_RS24700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24700 NZ_CP100137.1 Protein Homology CDS 1812327 1812842 . + 0 ID=cds-WP_015877428.1;Parent=gene-NIV78_RS24700;Dbxref=Genbank:WP_015877428.1;Name=WP_015877428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004184509.1;locus_tag=NIV78_RS24700;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_015877428.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1813071 1814423 . - . ID=gene-NIV78_RS24705;Name=NIV78_RS24705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24705 NZ_CP100137.1 Protein Homology CDS 1813071 1814423 . - 0 ID=cds-WP_015877429.1;Parent=gene-NIV78_RS24705;Dbxref=Genbank:WP_015877429.1;Name=WP_015877429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011491517.1;locus_tag=NIV78_RS24705;product=TRAP transporter large permease;protein_id=WP_015877429.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1814430 1814909 . - . ID=gene-NIV78_RS24710;Name=NIV78_RS24710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24710 NZ_CP100137.1 Protein Homology CDS 1814430 1814909 . - 0 ID=cds-WP_230674548.1;Parent=gene-NIV78_RS24710;Dbxref=Genbank:WP_230674548.1;Name=WP_230674548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690060.1;locus_tag=NIV78_RS24710;product=TRAP transporter small permease;protein_id=WP_230674548.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1815010 1816002 . - . ID=gene-NIV78_RS24715;Name=NIV78_RS24715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24715 NZ_CP100137.1 Protein Homology CDS 1815010 1816002 . - 0 ID=cds-WP_015877431.1;Parent=gene-NIV78_RS24715;Dbxref=Genbank:WP_015877431.1;Name=WP_015877431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726257.1;locus_tag=NIV78_RS24715;product=TRAP transporter substrate-binding protein;protein_id=WP_015877431.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1816063 1816206 . - . ID=gene-NIV78_RS24720;Name=NIV78_RS24720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24720 NZ_CP100137.1 Protein Homology CDS 1816063 1816206 . - 0 ID=cds-WP_017922792.1;Parent=gene-NIV78_RS24720;Dbxref=Genbank:WP_017922792.1;Name=WP_017922792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423398.1;locus_tag=NIV78_RS24720;product=hypothetical protein;protein_id=WP_017922792.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1817142 1817279 . - . ID=gene-NIV78_RS24725;Name=NIV78_RS24725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24725 NZ_CP100137.1 Protein Homology CDS 1817142 1817279 . - 0 ID=cds-WP_017423397.1;Parent=gene-NIV78_RS24725;Dbxref=Genbank:WP_017423397.1;Name=WP_017423397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423397.1;locus_tag=NIV78_RS24725;product=hypothetical protein;protein_id=WP_017423397.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1817619 1818413 . - . ID=gene-NIV78_RS24730;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=protein_coding;locus_tag=NIV78_RS24730 NZ_CP100137.1 Protein Homology CDS 1817619 1818413 . - 0 ID=cds-WP_017923950.1;Parent=gene-NIV78_RS24730;Dbxref=Genbank:WP_017923950.1;Name=WP_017923950.1;Ontology_term=GO:0018802;gbkey=CDS;gene=hpaI;go_function=2%2C4-dihydroxyhept-2-ene-1%2C7-dioate aldolase activity|0018802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423396.1;locus_tag=NIV78_RS24730;product=4-hydroxy-2-oxoheptanedioate aldolase;protein_id=WP_017923950.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1818876 1819013 . - . ID=gene-NIV78_RS24735;Name=NIV78_RS24735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24735 NZ_CP100137.1 Protein Homology CDS 1818876 1819013 . - 0 ID=cds-WP_017423395.1;Parent=gene-NIV78_RS24735;Dbxref=Genbank:WP_017423395.1;Name=WP_017423395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423395.1;locus_tag=NIV78_RS24735;product=hypothetical protein;protein_id=WP_017423395.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1819012 1820745 . + . ID=gene-NIV78_RS24740;Name=NIV78_RS24740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24740 NZ_CP100137.1 Protein Homology CDS 1819012 1820745 . + 0 ID=cds-WP_015877433.1;Parent=gene-NIV78_RS24740;Dbxref=Genbank:WP_015877433.1;Name=WP_015877433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423394.1;locus_tag=NIV78_RS24740;product=S8 family peptidase;protein_id=WP_015877433.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1821046 1821714 . + . ID=gene-NIV78_RS24745;Name=NIV78_RS24745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24745 NZ_CP100137.1 Protein Homology CDS 1821046 1821714 . + 0 ID=cds-WP_015877434.1;Parent=gene-NIV78_RS24745;Dbxref=Genbank:WP_015877434.1;Name=WP_015877434.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=cation transmembrane transporter activity|0008324||IEA;go_process=cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877434.1;locus_tag=NIV78_RS24745;product=cation transporter;protein_id=WP_015877434.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1821805 1822029 . - . ID=gene-NIV78_RS24750;Name=NIV78_RS24750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24750 NZ_CP100137.1 Protein Homology CDS 1821805 1822029 . - 0 ID=cds-WP_015877435.1;Parent=gene-NIV78_RS24750;Dbxref=Genbank:WP_015877435.1;Name=WP_015877435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423393.1;locus_tag=NIV78_RS24750;product=hypothetical protein;protein_id=WP_015877435.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1822084 1823097 . - . ID=gene-NIV78_RS24755;Name=NIV78_RS24755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24755 NZ_CP100137.1 Protein Homology CDS 1822084 1823097 . - 0 ID=cds-WP_171467019.1;Parent=gene-NIV78_RS24755;Dbxref=Genbank:WP_171467019.1;Name=WP_171467019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877436.1;locus_tag=NIV78_RS24755;product=alpha/beta fold hydrolase;protein_id=WP_171467019.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1823103 1824473 . - . ID=gene-NIV78_RS24760;Name=NIV78_RS24760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24760 NZ_CP100137.1 Protein Homology CDS 1823103 1824473 . - 0 ID=cds-WP_017924253.1;Parent=gene-NIV78_RS24760;Dbxref=Genbank:WP_017924253.1;Name=WP_017924253.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423391.1;locus_tag=NIV78_RS24760;product=MFS transporter;protein_id=WP_017924253.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1824470 1825597 . - . ID=gene-NIV78_RS24765;Name=NIV78_RS24765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24765 NZ_CP100137.1 Protein Homology CDS 1824470 1825597 . - 0 ID=cds-WP_251107800.1;Parent=gene-NIV78_RS24765;Dbxref=Genbank:WP_251107800.1;Name=WP_251107800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877438.1;locus_tag=NIV78_RS24765;product=alpha/beta hydrolase;protein_id=WP_251107800.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1825623 1825817 . - . ID=gene-NIV78_RS24770;Name=NIV78_RS24770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24770 NZ_CP100137.1 GeneMarkS-2+ CDS 1825623 1825817 . - 0 ID=cds-WP_127913897.1;Parent=gene-NIV78_RS24770;Dbxref=Genbank:WP_127913897.1;Name=WP_127913897.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS24770;product=hypothetical protein;protein_id=WP_127913897.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1825999 1826928 . + . ID=gene-NIV78_RS24775;Name=NIV78_RS24775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24775 NZ_CP100137.1 Protein Homology CDS 1825999 1826928 . + 0 ID=cds-WP_017924691.1;Parent=gene-NIV78_RS24775;Dbxref=Genbank:WP_017924691.1;Name=WP_017924691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877439.1;locus_tag=NIV78_RS24775;product=LysR family transcriptional regulator;protein_id=WP_017924691.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1827088 1827417 . - . ID=gene-NIV78_RS24780;Name=NIV78_RS24780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24780 NZ_CP100137.1 Protein Homology CDS 1827088 1827417 . - 0 ID=cds-WP_017923803.1;Parent=gene-NIV78_RS24780;Dbxref=Genbank:WP_017923803.1;Name=WP_017923803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877440.1;locus_tag=NIV78_RS24780;product=hypothetical protein;protein_id=WP_017923803.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1827414 1828916 . - . ID=gene-NIV78_RS24785;Name=NIV78_RS24785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24785 NZ_CP100137.1 Protein Homology CDS 1827414 1828916 . - 0 ID=cds-WP_015877441.1;Parent=gene-NIV78_RS24785;Dbxref=Genbank:WP_015877441.1;Name=WP_015877441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877441.1;locus_tag=NIV78_RS24785;product=PLP-dependent aminotransferase family protein;protein_id=WP_015877441.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1829083 1831413 . + . ID=gene-NIV78_RS24790;Name=NIV78_RS24790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24790 NZ_CP100137.1 Protein Homology CDS 1829083 1831413 . + 0 ID=cds-WP_015877442.1;Parent=gene-NIV78_RS24790;Dbxref=Genbank:WP_015877442.1;Name=WP_015877442.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690032.1;locus_tag=NIV78_RS24790;product=FdhF/YdeP family oxidoreductase;protein_id=WP_015877442.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1831642 1832550 . + . ID=gene-NIV78_RS24795;Name=NIV78_RS24795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24795 NZ_CP100137.1 Protein Homology CDS 1831642 1832550 . + 0 ID=cds-WP_017924614.1;Parent=gene-NIV78_RS24795;Dbxref=Genbank:WP_017924614.1;Name=WP_017924614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877443.1;locus_tag=NIV78_RS24795;product=hypothetical protein;protein_id=WP_017924614.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1832730 1833101 . + . ID=gene-NIV78_RS24800;Name=NIV78_RS24800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24800 NZ_CP100137.1 GeneMarkS-2+ CDS 1832730 1833101 . + 0 ID=cds-WP_017924615.1;Parent=gene-NIV78_RS24800;Dbxref=Genbank:WP_017924615.1;Name=WP_017924615.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS24800;product=hypothetical protein;protein_id=WP_017924615.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1833325 1834011 . + . ID=gene-NIV78_RS24805;Name=NIV78_RS24805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24805 NZ_CP100137.1 Protein Homology CDS 1833325 1834011 . + 0 ID=cds-WP_100556232.1;Parent=gene-NIV78_RS24805;Dbxref=Genbank:WP_100556232.1;Name=WP_100556232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690007.1;locus_tag=NIV78_RS24805;product=hypothetical protein;protein_id=WP_100556232.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1834136 1835725 . + . ID=gene-NIV78_RS24810;Name=NIV78_RS24810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24810 NZ_CP100137.1 Protein Homology CDS 1834136 1835725 . + 0 ID=cds-WP_017425188.1;Parent=gene-NIV78_RS24810;Dbxref=Genbank:WP_017425188.1;Name=WP_017425188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216866.1;locus_tag=NIV78_RS24810;product=ABC transporter substrate-binding protein;protein_id=WP_017425188.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1835796 1836335 . - . ID=gene-NIV78_RS24815;Name=NIV78_RS24815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24815 NZ_CP100137.1 Protein Homology CDS 1835796 1836335 . - 0 ID=cds-WP_015877445.1;Parent=gene-NIV78_RS24815;Dbxref=Genbank:WP_015877445.1;Name=WP_015877445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877445.1;locus_tag=NIV78_RS24815;product=hypothetical protein;protein_id=WP_015877445.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1836528 1838147 . + . ID=gene-NIV78_RS24820;Name=NIV78_RS24820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24820 NZ_CP100137.1 Protein Homology CDS 1836528 1838147 . + 0 ID=cds-WP_017923828.1;Parent=gene-NIV78_RS24820;Dbxref=Genbank:WP_017923828.1;Name=WP_017923828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877446.1;locus_tag=NIV78_RS24820;product=ABC transporter substrate-binding protein;protein_id=WP_017923828.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1838229 1839341 . + . ID=gene-NIV78_RS24825;Name=NIV78_RS24825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24825 NZ_CP100137.1 Protein Homology CDS 1838229 1839341 . + 0 ID=cds-WP_015877447.1;Parent=gene-NIV78_RS24825;Dbxref=Genbank:WP_015877447.1;Name=WP_015877447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424727.1;locus_tag=NIV78_RS24825;product=ABC transporter permease;protein_id=WP_015877447.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1839397 1840326 . + . ID=gene-NIV78_RS24830;Name=NIV78_RS24830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24830 NZ_CP100137.1 Protein Homology CDS 1839397 1840326 . + 0 ID=cds-WP_017924387.1;Parent=gene-NIV78_RS24830;Dbxref=Genbank:WP_017924387.1;Name=WP_017924387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689999.1;locus_tag=NIV78_RS24830;product=ABC transporter permease;protein_id=WP_017924387.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1840328 1841215 . + . ID=gene-NIV78_RS24835;Name=NIV78_RS24835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24835 NZ_CP100137.1 Protein Homology CDS 1840328 1841215 . + 0 ID=cds-WP_251107799.1;Parent=gene-NIV78_RS24835;Dbxref=Genbank:WP_251107799.1;Name=WP_251107799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877449.1;locus_tag=NIV78_RS24835;product=ATP-binding cassette domain-containing protein;protein_id=WP_251107799.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1841254 1842039 . + . ID=gene-NIV78_RS24840;Name=NIV78_RS24840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24840 NZ_CP100137.1 Protein Homology CDS 1841254 1842039 . + 0 ID=cds-WP_039202232.1;Parent=gene-NIV78_RS24840;Dbxref=Genbank:WP_039202232.1;Name=WP_039202232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877450.1;locus_tag=NIV78_RS24840;product=ABC transporter ATP-binding protein;protein_id=WP_039202232.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1842200 1842454 . + . ID=gene-NIV78_RS24845;Name=NIV78_RS24845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24845 NZ_CP100137.1 Protein Homology CDS 1842200 1842454 . + 0 ID=cds-WP_015877451.1;Parent=gene-NIV78_RS24845;Dbxref=Genbank:WP_015877451.1;Name=WP_015877451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410062.1;locus_tag=NIV78_RS24845;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_015877451.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1842475 1843347 . - . ID=gene-NIV78_RS24850;Name=NIV78_RS24850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24850 NZ_CP100137.1 Protein Homology CDS 1842475 1843347 . - 0 ID=cds-WP_043228176.1;Parent=gene-NIV78_RS24850;Dbxref=Genbank:WP_043228176.1;Name=WP_043228176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202658.1;locus_tag=NIV78_RS24850;product=LysR substrate-binding domain-containing protein;protein_id=WP_043228176.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1843551 1844441 . - . ID=gene-NIV78_RS24855;Name=bla;gbkey=Gene;gene=bla;gene_biotype=protein_coding;locus_tag=NIV78_RS24855 NZ_CP100137.1 Protein Homology CDS 1843551 1844441 . - 0 ID=cds-WP_251107798.1;Parent=gene-NIV78_RS24855;Dbxref=Genbank:WP_251107798.1;Name=WP_251107798.1;Ontology_term=GO:0030655,GO:0046677,GO:0008800;gbkey=CDS;gene=bla;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_027789588.1;locus_tag=NIV78_RS24855;product=class A beta-lactamase;protein_id=WP_251107798.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 1844666 1845073 . - . ID=gene-NIV78_RS24860;Name=NIV78_RS24860;end_range=1845073,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS24860;partial=true;pseudo=true NZ_CP100137.1 Protein Homology CDS 1844666 1845073 . - 0 ID=cds-NIV78_RS24860;Parent=gene-NIV78_RS24860;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1845073,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011853084.1;locus_tag=NIV78_RS24860;partial=true;product=M23 family metallopeptidase;pseudo=true;transl_table=11 NZ_CP100137.1 RefSeq gene 1845476 1845739 . + . ID=gene-NIV78_RS24865;Name=NIV78_RS24865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24865 NZ_CP100137.1 Protein Homology CDS 1845476 1845739 . + 0 ID=cds-WP_015877455.1;Parent=gene-NIV78_RS24865;Dbxref=Genbank:WP_015877455.1;Name=WP_015877455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877455.1;locus_tag=NIV78_RS24865;product=cupin domain-containing protein;protein_id=WP_015877455.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1846128 1847027 . + . ID=gene-NIV78_RS24870;Name=NIV78_RS24870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24870 NZ_CP100137.1 Protein Homology CDS 1846128 1847027 . + 0 ID=cds-WP_015877457.1;Parent=gene-NIV78_RS24870;Dbxref=Genbank:WP_015877457.1;Name=WP_015877457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877457.1;locus_tag=NIV78_RS24870;product=LysR substrate-binding domain-containing protein;protein_id=WP_015877457.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1847133 1847882 . - . ID=gene-NIV78_RS24875;Name=NIV78_RS24875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24875 NZ_CP100137.1 Protein Homology CDS 1847133 1847882 . - 0 ID=cds-WP_100556228.1;Parent=gene-NIV78_RS24875;Dbxref=Genbank:WP_100556228.1;Name=WP_100556228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877458.1;locus_tag=NIV78_RS24875;product=sulfite exporter TauE/SafE family protein;protein_id=WP_100556228.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1848192 1849346 . - . ID=gene-NIV78_RS24880;Name=NIV78_RS24880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24880 NZ_CP100137.1 Protein Homology CDS 1848192 1849346 . - 0 ID=cds-WP_100556227.1;Parent=gene-NIV78_RS24880;Dbxref=Genbank:WP_100556227.1;Name=WP_100556227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009907726.1;locus_tag=NIV78_RS24880;product=porin;protein_id=WP_100556227.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1849782 1850888 . + . ID=gene-NIV78_RS24885;Name=NIV78_RS24885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24885 NZ_CP100137.1 Protein Homology CDS 1849782 1850888 . + 0 ID=cds-WP_015877460.1;Parent=gene-NIV78_RS24885;Dbxref=Genbank:WP_015877460.1;Name=WP_015877460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409779.1;locus_tag=NIV78_RS24885;product=OpgC domain-containing protein;protein_id=WP_015877460.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1851158 1852069 . + . ID=gene-NIV78_RS24890;Name=NIV78_RS24890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24890 NZ_CP100137.1 Protein Homology CDS 1851158 1852069 . + 0 ID=cds-WP_124837094.1;Parent=gene-NIV78_RS24890;Dbxref=Genbank:WP_124837094.1;Name=WP_124837094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010108809.1;locus_tag=NIV78_RS24890;product=alpha/beta hydrolase-fold protein;protein_id=WP_124837094.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1852248 1853510 . + . ID=gene-NIV78_RS24895;Name=NIV78_RS24895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24895 NZ_CP100137.1 Protein Homology CDS 1852248 1853510 . + 0 ID=cds-WP_100556226.1;Parent=gene-NIV78_RS24895;Dbxref=Genbank:WP_100556226.1;Name=WP_100556226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877462.1;locus_tag=NIV78_RS24895;product=mechanosensitive ion channel;protein_id=WP_100556226.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1853663 1854427 . - . ID=gene-NIV78_RS24900;Name=NIV78_RS24900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24900 NZ_CP100137.1 Protein Homology CDS 1853663 1854427 . - 0 ID=cds-WP_017924400.1;Parent=gene-NIV78_RS24900;Dbxref=Genbank:WP_017924400.1;Name=WP_017924400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877463.1;locus_tag=NIV78_RS24900;product=metallophosphatase family protein;protein_id=WP_017924400.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1854672 1855607 . + . ID=gene-NIV78_RS24905;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=NIV78_RS24905 NZ_CP100137.1 Protein Homology CDS 1854672 1855607 . + 0 ID=cds-WP_017924399.1;Parent=gene-NIV78_RS24905;Dbxref=Genbank:WP_017924399.1;Name=WP_017924399.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877464.1;locus_tag=NIV78_RS24905;product=2-dehydropantoate 2-reductase;protein_id=WP_017924399.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1856035 1857375 . + . ID=gene-NIV78_RS24910;Name=NIV78_RS24910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24910 NZ_CP100137.1 Protein Homology CDS 1856035 1857375 . + 0 ID=cds-WP_052690854.1;Parent=gene-NIV78_RS24910;Dbxref=Genbank:WP_052690854.1;Name=WP_052690854.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877465.1;locus_tag=NIV78_RS24910;product=Nramp family divalent metal transporter;protein_id=WP_052690854.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1857439 1858464 . - . ID=gene-NIV78_RS24915;Name=NIV78_RS24915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24915 NZ_CP100137.1 Protein Homology CDS 1857439 1858464 . - 0 ID=cds-WP_015877466.1;Parent=gene-NIV78_RS24915;Dbxref=Genbank:WP_015877466.1;Name=WP_015877466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004531081.1;locus_tag=NIV78_RS24915;product=sulfonate ABC transporter substrate-binding protein;protein_id=WP_015877466.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1858803 1859564 . - . ID=gene-NIV78_RS24920;Name=NIV78_RS24920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24920 NZ_CP100137.1 Protein Homology CDS 1858803 1859564 . - 0 ID=cds-WP_015877467.1;Parent=gene-NIV78_RS24920;Dbxref=Genbank:WP_015877467.1;Name=WP_015877467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877467.1;locus_tag=NIV78_RS24920;product=2-keto-4-pentenoate hydratase;protein_id=WP_015877467.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1859703 1860503 . - . ID=gene-NIV78_RS24925;Name=NIV78_RS24925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24925 NZ_CP100137.1 Protein Homology CDS 1859703 1860503 . - 0 ID=cds-WP_015877468.1;Parent=gene-NIV78_RS24925;Dbxref=Genbank:WP_015877468.1;Name=WP_015877468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877468.1;locus_tag=NIV78_RS24925;product=MipA/OmpV family protein;protein_id=WP_015877468.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1860505 1861443 . - . ID=gene-NIV78_RS24930;Name=NIV78_RS24930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24930 NZ_CP100137.1 Protein Homology CDS 1860505 1861443 . - 0 ID=cds-WP_015877469.1;Parent=gene-NIV78_RS24930;Dbxref=Genbank:WP_015877469.1;Name=WP_015877469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877469.1;locus_tag=NIV78_RS24930;product=alpha/beta fold hydrolase;protein_id=WP_015877469.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1861445 1862236 . - . ID=gene-NIV78_RS24935;Name=NIV78_RS24935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24935 NZ_CP100137.1 Protein Homology CDS 1861445 1862236 . - 0 ID=cds-WP_015877470.1;Parent=gene-NIV78_RS24935;Dbxref=Genbank:WP_015877470.1;Name=WP_015877470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877470.1;locus_tag=NIV78_RS24935;product=DUF4118 domain-containing protein;protein_id=WP_015877470.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1862788 1863555 . - . ID=gene-NIV78_RS24940;Name=NIV78_RS24940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24940 NZ_CP100137.1 GeneMarkS-2+ CDS 1862788 1863555 . - 0 ID=cds-WP_251107797.1;Parent=gene-NIV78_RS24940;Dbxref=Genbank:WP_251107797.1;Name=WP_251107797.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS24940;product=hypothetical protein;protein_id=WP_251107797.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1863842 1865170 . - . ID=gene-NIV78_RS24945;Name=NIV78_RS24945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24945 NZ_CP100137.1 Protein Homology CDS 1863842 1865170 . - 0 ID=cds-WP_169511505.1;Parent=gene-NIV78_RS24945;Dbxref=Genbank:WP_169511505.1;Name=WP_169511505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009900352.1;locus_tag=NIV78_RS24945;product=FAD-binding oxidoreductase;protein_id=WP_169511505.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1865641 1866495 . + . ID=gene-NIV78_RS24950;Name=NIV78_RS24950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24950 NZ_CP100137.1 Protein Homology CDS 1865641 1866495 . + 0 ID=cds-WP_015877472.1;Parent=gene-NIV78_RS24950;Dbxref=Genbank:WP_015877472.1;Name=WP_015877472.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877472.1;locus_tag=NIV78_RS24950;product=helix-turn-helix domain-containing protein;protein_id=WP_015877472.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1866651 1868309 . + . ID=gene-NIV78_RS24955;Name=NIV78_RS24955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24955 NZ_CP100137.1 Protein Homology CDS 1866651 1868309 . + 0 ID=cds-WP_015877473.1;Parent=gene-NIV78_RS24955;Dbxref=Genbank:WP_015877473.1;Name=WP_015877473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877473.1;locus_tag=NIV78_RS24955;product=ATP-binding domain-containing protein;protein_id=WP_015877473.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1868442 1869995 . - . ID=gene-NIV78_RS24960;Name=NIV78_RS24960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24960 NZ_CP100137.1 Protein Homology CDS 1868442 1869995 . - 0 ID=cds-WP_015877474.1;Parent=gene-NIV78_RS24960;Dbxref=Genbank:WP_015877474.1;Name=WP_015877474.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010118524.1;locus_tag=NIV78_RS24960;product=methyl-accepting chemotaxis protein;protein_id=WP_015877474.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1870212 1871084 . + . ID=gene-NIV78_RS24965;Name=NIV78_RS24965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24965 NZ_CP100137.1 Protein Homology CDS 1870212 1871084 . + 0 ID=cds-WP_017924322.1;Parent=gene-NIV78_RS24965;Dbxref=Genbank:WP_017924322.1;Name=WP_017924322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877475.1;locus_tag=NIV78_RS24965;product=MerR family transcriptional regulator;protein_id=WP_017924322.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1871236 1872330 . + . ID=gene-NIV78_RS24970;Name=NIV78_RS24970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24970 NZ_CP100137.1 Protein Homology CDS 1871236 1872330 . + 0 ID=cds-WP_251107796.1;Parent=gene-NIV78_RS24970;Dbxref=Genbank:WP_251107796.1;Name=WP_251107796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877476.1;locus_tag=NIV78_RS24970;product=aliphatic sulfonate ABC transporter substrate-binding protein;protein_id=WP_251107796.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1872356 1873840 . - . ID=gene-NIV78_RS24975;Name=NIV78_RS24975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24975 NZ_CP100137.1 Protein Homology CDS 1872356 1873840 . - 0 ID=cds-WP_015877477.1;Parent=gene-NIV78_RS24975;Dbxref=Genbank:WP_015877477.1;Name=WP_015877477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689954.1;locus_tag=NIV78_RS24975;product=SulP family inorganic anion transporter;protein_id=WP_015877477.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1874295 1874909 . - . ID=gene-NIV78_RS24980;Name=NIV78_RS24980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24980 NZ_CP100137.1 GeneMarkS-2+ CDS 1874295 1874909 . - 0 ID=cds-WP_124837088.1;Parent=gene-NIV78_RS24980;Dbxref=Genbank:WP_124837088.1;Name=WP_124837088.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS24980;product=hypothetical protein;protein_id=WP_124837088.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1875439 1876605 . + . ID=gene-NIV78_RS24985;Name=NIV78_RS24985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24985 NZ_CP100137.1 Protein Homology CDS 1875439 1876605 . + 0 ID=cds-WP_017924182.1;Parent=gene-NIV78_RS24985;Dbxref=Genbank:WP_017924182.1;Name=WP_017924182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425365.1;locus_tag=NIV78_RS24985;product=porin;protein_id=WP_017924182.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1876979 1877542 . - . ID=gene-NIV78_RS24990;Name=NIV78_RS24990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24990 NZ_CP100137.1 Protein Homology CDS 1876979 1877542 . - 0 ID=cds-WP_015877479.1;Parent=gene-NIV78_RS24990;Dbxref=Genbank:WP_015877479.1;Name=WP_015877479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877479.1;locus_tag=NIV78_RS24990;product=GNAT family N-acetyltransferase;protein_id=WP_015877479.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1878217 1878924 . + . ID=gene-NIV78_RS24995;Name=NIV78_RS24995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS24995 NZ_CP100137.1 Protein Homology CDS 1878217 1878924 . + 0 ID=cds-WP_015877480.1;Parent=gene-NIV78_RS24995;Dbxref=Genbank:WP_015877480.1;Name=WP_015877480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877480.1;locus_tag=NIV78_RS24995;product=hypothetical protein;protein_id=WP_015877480.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1879185 1880522 . - . ID=gene-NIV78_RS25000;Name=NIV78_RS25000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25000 NZ_CP100137.1 Protein Homology CDS 1879185 1880522 . - 0 ID=cds-WP_251107795.1;Parent=gene-NIV78_RS25000;Dbxref=Genbank:WP_251107795.1;Name=WP_251107795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877481.1;locus_tag=NIV78_RS25000;product=MFS transporter;protein_id=WP_251107795.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1880708 1880902 . - . ID=gene-NIV78_RS25005;Name=NIV78_RS25005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25005 NZ_CP100137.1 Protein Homology CDS 1880708 1880902 . - 0 ID=cds-WP_015877482.1;Parent=gene-NIV78_RS25005;Dbxref=Genbank:WP_015877482.1;Name=WP_015877482.1;Ontology_term=GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877482.1;locus_tag=NIV78_RS25005;product=YqaE/Pmp3 family membrane protein;protein_id=WP_015877482.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1881063 1882025 . - . ID=gene-NIV78_RS25010;Name=NIV78_RS25010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25010 NZ_CP100137.1 Protein Homology CDS 1881063 1882025 . - 0 ID=cds-WP_035979183.1;Parent=gene-NIV78_RS25010;Dbxref=Genbank:WP_035979183.1;Name=WP_035979183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010101851.1;locus_tag=NIV78_RS25010;product=LysR family transcriptional regulator;protein_id=WP_035979183.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1882287 1883879 . + . ID=gene-NIV78_RS25015;Name=NIV78_RS25015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25015 NZ_CP100137.1 Protein Homology CDS 1882287 1883879 . + 0 ID=cds-WP_153478965.1;Parent=gene-NIV78_RS25015;Dbxref=Genbank:WP_153478965.1;Name=WP_153478965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877484.1;locus_tag=NIV78_RS25015;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_153478965.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1883898 1884824 . + . ID=gene-NIV78_RS25020;Name=NIV78_RS25020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25020 NZ_CP100137.1 Protein Homology CDS 1883898 1884824 . + 0 ID=cds-WP_015877485.1;Parent=gene-NIV78_RS25020;Dbxref=Genbank:WP_015877485.1;Name=WP_015877485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202679.1;locus_tag=NIV78_RS25020;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_015877485.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1884821 1885717 . + . ID=gene-NIV78_RS25025;Name=NIV78_RS25025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25025 NZ_CP100137.1 Protein Homology CDS 1884821 1885717 . + 0 ID=cds-WP_015877486.1;Parent=gene-NIV78_RS25025;Dbxref=Genbank:WP_015877486.1;Name=WP_015877486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877486.1;locus_tag=NIV78_RS25025;product=metal-dependent hydrolase;protein_id=WP_015877486.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1885726 1886670 . + . ID=gene-NIV78_RS25030;Name=NIV78_RS25030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25030 NZ_CP100137.1 Protein Homology CDS 1885726 1886670 . + 0 ID=cds-WP_161521860.1;Parent=gene-NIV78_RS25030;Dbxref=Genbank:WP_161521860.1;Name=WP_161521860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423962.1;locus_tag=NIV78_RS25030;product=alpha/beta fold hydrolase;protein_id=WP_161521860.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1886850 1887647 . + . ID=gene-NIV78_RS25035;Name=NIV78_RS25035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25035 NZ_CP100137.1 Protein Homology CDS 1886850 1887647 . + 0 ID=cds-WP_043225979.1;Parent=gene-NIV78_RS25035;Dbxref=Genbank:WP_043225979.1;Name=WP_043225979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020379714.1;locus_tag=NIV78_RS25035;product=hypothetical protein;protein_id=WP_043225979.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1887976 1888458 . + . ID=gene-NIV78_RS25040;Name=NIV78_RS25040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25040 NZ_CP100137.1 Protein Homology CDS 1887976 1888458 . + 0 ID=cds-WP_015877489.1;Parent=gene-NIV78_RS25040;Dbxref=Genbank:WP_015877489.1;Name=WP_015877489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010098798.1;locus_tag=NIV78_RS25040;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_015877489.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1888502 1889374 . - . ID=gene-NIV78_RS25045;Name=NIV78_RS25045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25045 NZ_CP100137.1 Protein Homology CDS 1888502 1889374 . - 0 ID=cds-WP_017923389.1;Parent=gene-NIV78_RS25045;Dbxref=Genbank:WP_017923389.1;Name=WP_017923389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877490.1;locus_tag=NIV78_RS25045;product=arylamine N-acetyltransferase;protein_id=WP_017923389.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1889667 1890422 . - . ID=gene-NIV78_RS25050;Name=NIV78_RS25050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25050 NZ_CP100137.1 Protein Homology CDS 1889667 1890422 . - 0 ID=cds-WP_017923390.1;Parent=gene-NIV78_RS25050;Dbxref=Genbank:WP_017923390.1;Name=WP_017923390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877491.1;locus_tag=NIV78_RS25050;product=hypothetical protein;protein_id=WP_017923390.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1890557 1892044 . - . ID=gene-NIV78_RS25055;Name=NIV78_RS25055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25055 NZ_CP100137.1 Protein Homology CDS 1890557 1892044 . - 0 ID=cds-WP_017923391.1;Parent=gene-NIV78_RS25055;Dbxref=Genbank:WP_017923391.1;Name=WP_017923391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877492.1;locus_tag=NIV78_RS25055;product=amidase;protein_id=WP_017923391.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1892425 1892859 . + . ID=gene-NIV78_RS25060;Name=NIV78_RS25060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25060 NZ_CP100137.1 Protein Homology CDS 1892425 1892859 . + 0 ID=cds-WP_017423988.1;Parent=gene-NIV78_RS25060;Dbxref=Genbank:WP_017423988.1;Name=WP_017423988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004540669.1;locus_tag=NIV78_RS25060;product=universal stress protein;protein_id=WP_017423988.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1892995 1893606 . - . ID=gene-NIV78_RS25065;Name=NIV78_RS25065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25065 NZ_CP100137.1 Protein Homology CDS 1892995 1893606 . - 0 ID=cds-WP_237657814.1;Parent=gene-NIV78_RS25065;Dbxref=Genbank:WP_237657814.1;Name=WP_237657814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877494.1;locus_tag=NIV78_RS25065;product=thioredoxin fold domain-containing protein;protein_id=WP_237657814.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1893869 1894465 . - . ID=gene-NIV78_RS25070;Name=NIV78_RS25070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25070 NZ_CP100137.1 Protein Homology CDS 1893869 1894465 . - 0 ID=cds-WP_015877495.1;Parent=gene-NIV78_RS25070;Dbxref=Genbank:WP_015877495.1;Name=WP_015877495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877495.1;locus_tag=NIV78_RS25070;product=alpha-ketoglutarate-dependent dioxygenase AlkB;protein_id=WP_015877495.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1894616 1895200 . + . ID=gene-NIV78_RS25075;Name=NIV78_RS25075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25075 NZ_CP100137.1 Protein Homology CDS 1894616 1895200 . + 0 ID=cds-WP_015877496.1;Parent=gene-NIV78_RS25075;Dbxref=Genbank:WP_015877496.1;Name=WP_015877496.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532724.1;locus_tag=NIV78_RS25075;product=malonic semialdehyde reductase;protein_id=WP_015877496.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1895471 1896637 . + . ID=gene-NIV78_RS25080;Name=NIV78_RS25080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25080 NZ_CP100137.1 Protein Homology CDS 1895471 1896637 . + 0 ID=cds-WP_251119090.1;Parent=gene-NIV78_RS25080;Dbxref=Genbank:WP_251119090.1;Name=WP_251119090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877497.1;locus_tag=NIV78_RS25080;product=metallophosphoesterase;protein_id=WP_251119090.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1897175 1897888 . + . ID=gene-NIV78_RS25085;Name=NIV78_RS25085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25085 NZ_CP100137.1 Protein Homology CDS 1897175 1897888 . + 0 ID=cds-WP_015877498.1;Parent=gene-NIV78_RS25085;Dbxref=Genbank:WP_015877498.1;Name=WP_015877498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009897347.1;locus_tag=NIV78_RS25085;product=MgtC/SapB family protein;protein_id=WP_015877498.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1897977 1898696 . - . ID=gene-NIV78_RS25090;Name=NIV78_RS25090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25090 NZ_CP100137.1 Protein Homology CDS 1897977 1898696 . - 0 ID=cds-WP_015877499.1;Parent=gene-NIV78_RS25090;Dbxref=Genbank:WP_015877499.1;Name=WP_015877499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004184923.1;locus_tag=NIV78_RS25090;product=autoinducer binding domain-containing protein;protein_id=WP_015877499.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1898772 1899224 . + . ID=gene-NIV78_RS25095;Name=NIV78_RS25095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25095 NZ_CP100137.1 Protein Homology CDS 1898772 1899224 . + 0 ID=cds-WP_015877500.1;Parent=gene-NIV78_RS25095;Dbxref=Genbank:WP_015877500.1;Name=WP_015877500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877500.1;locus_tag=NIV78_RS25095;product=DUF4902 domain-containing protein;protein_id=WP_015877500.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1899496 1900107 . + . ID=gene-NIV78_RS25100;Name=NIV78_RS25100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25100 NZ_CP100137.1 Protein Homology CDS 1899496 1900107 . + 0 ID=cds-WP_015877501.1;Parent=gene-NIV78_RS25100;Dbxref=Genbank:WP_015877501.1;Name=WP_015877501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523992.1;locus_tag=NIV78_RS25100;product=GNAT family N-acetyltransferase;protein_id=WP_015877501.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1900157 1901086 . - . ID=gene-NIV78_RS25105;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=NIV78_RS25105 NZ_CP100137.1 Protein Homology CDS 1900157 1901086 . - 0 ID=cds-WP_015877502.1;Parent=gene-NIV78_RS25105;Dbxref=Genbank:WP_015877502.1;Name=WP_015877502.1;Ontology_term=GO:0006592,GO:0003942;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877502.1;locus_tag=NIV78_RS25105;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_015877502.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1901218 1902102 . + . ID=gene-NIV78_RS25110;Name=NIV78_RS25110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25110 NZ_CP100137.1 Protein Homology CDS 1901218 1902102 . + 0 ID=cds-WP_015877503.1;Parent=gene-NIV78_RS25110;Dbxref=Genbank:WP_015877503.1;Name=WP_015877503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877503.1;locus_tag=NIV78_RS25110;product=LysR family transcriptional regulator;protein_id=WP_015877503.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1902171 1902323 . + . ID=gene-NIV78_RS25115;Name=NIV78_RS25115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25115 NZ_CP100137.1 GeneMarkS-2+ CDS 1902171 1902323 . + 0 ID=cds-WP_153478979.1;Parent=gene-NIV78_RS25115;Dbxref=Genbank:WP_153478979.1;Name=WP_153478979.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS25115;product=hypothetical protein;protein_id=WP_153478979.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1902310 1903350 . - . ID=gene-NIV78_RS25120;Name=NIV78_RS25120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25120 NZ_CP100137.1 Protein Homology CDS 1902310 1903350 . - 0 ID=cds-WP_017922572.1;Parent=gene-NIV78_RS25120;Dbxref=Genbank:WP_017922572.1;Name=WP_017922572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877504.1;locus_tag=NIV78_RS25120;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_017922572.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1903491 1903958 . + . ID=gene-NIV78_RS25125;Name=NIV78_RS25125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25125 NZ_CP100137.1 Protein Homology CDS 1903491 1903958 . + 0 ID=cds-WP_015877505.1;Parent=gene-NIV78_RS25125;Dbxref=Genbank:WP_015877505.1;Name=WP_015877505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877505.1;locus_tag=NIV78_RS25125;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_015877505.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1904044 1905009 . - . ID=gene-NIV78_RS25130;Name=NIV78_RS25130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25130 NZ_CP100137.1 Protein Homology CDS 1904044 1905009 . - 0 ID=cds-WP_017922571.1;Parent=gene-NIV78_RS25130;Dbxref=Genbank:WP_017922571.1;Name=WP_017922571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495155.1;locus_tag=NIV78_RS25130;product=PDR/VanB family oxidoreductase;protein_id=WP_017922571.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1905006 1906085 . - . ID=gene-NIV78_RS25135;Name=NIV78_RS25135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25135 NZ_CP100137.1 Protein Homology CDS 1905006 1906085 . - 0 ID=cds-WP_015877507.1;Parent=gene-NIV78_RS25135;Dbxref=Genbank:WP_015877507.1;Name=WP_015877507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483221.1;locus_tag=NIV78_RS25135;product=aromatic ring-hydroxylating dioxygenase subunit alpha;protein_id=WP_015877507.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1906272 1906748 . + . ID=gene-NIV78_RS25140;Name=NIV78_RS25140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25140 NZ_CP100137.1 Protein Homology CDS 1906272 1906748 . + 0 ID=cds-WP_015877508.1;Parent=gene-NIV78_RS25140;Dbxref=Genbank:WP_015877508.1;Name=WP_015877508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424159.1;locus_tag=NIV78_RS25140;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_015877508.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 1906950 1907084 . - . ID=gene-NIV78_RS25145;Name=NIV78_RS25145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS25145;partial=true;pseudo=true;start_range=.,1906950 NZ_CP100137.1 Protein Homology CDS 1906950 1907084 . - 0 ID=cds-NIV78_RS25145;Parent=gene-NIV78_RS25145;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011491397.1;locus_tag=NIV78_RS25145;partial=true;product=dihydrofolate reductase;pseudo=true;start_range=.,1906950;transl_table=11 NZ_CP100137.1 RefSeq gene 1907382 1908029 . - . ID=gene-NIV78_RS25150;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=NIV78_RS25150 NZ_CP100137.1 Protein Homology CDS 1907382 1908029 . - 0 ID=cds-WP_045678801.1;Parent=gene-NIV78_RS25150;Dbxref=Genbank:WP_045678801.1;Name=WP_045678801.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424218.1;locus_tag=NIV78_RS25150;product=GTP cyclohydrolase II;protein_id=WP_045678801.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1908190 1908654 . + . ID=gene-NIV78_RS25155;Name=NIV78_RS25155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25155 NZ_CP100137.1 Protein Homology CDS 1908190 1908654 . + 0 ID=cds-WP_015877511.1;Parent=gene-NIV78_RS25155;Dbxref=Genbank:WP_015877511.1;Name=WP_015877511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877511.1;locus_tag=NIV78_RS25155;product=CBS domain-containing protein;protein_id=WP_015877511.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1908958 1909287 . - . ID=gene-NIV78_RS25160;Name=NIV78_RS25160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25160 NZ_CP100137.1 Protein Homology CDS 1908958 1909287 . - 0 ID=cds-WP_015877512.1;Parent=gene-NIV78_RS25160;Dbxref=Genbank:WP_015877512.1;Name=WP_015877512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009900400.1;locus_tag=NIV78_RS25160;product=DUF4148 domain-containing protein;protein_id=WP_015877512.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1909537 1909713 . - . ID=gene-NIV78_RS25165;Name=NIV78_RS25165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25165 NZ_CP100137.1 GeneMarkS-2+ CDS 1909537 1909713 . - 0 ID=cds-WP_198292404.1;Parent=gene-NIV78_RS25165;Dbxref=Genbank:WP_198292404.1;Name=WP_198292404.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS25165;product=hypothetical protein;protein_id=WP_198292404.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1909716 1910801 . - . ID=gene-NIV78_RS25170;Name=NIV78_RS25170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25170 NZ_CP100137.1 Protein Homology CDS 1909716 1910801 . - 0 ID=cds-WP_015877513.1;Parent=gene-NIV78_RS25170;Dbxref=Genbank:WP_015877513.1;Name=WP_015877513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004184655.1;locus_tag=NIV78_RS25170;product=porin;protein_id=WP_015877513.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1911940 1912245 . + . ID=gene-NIV78_RS25175;Name=NIV78_RS25175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25175 NZ_CP100137.1 Protein Homology CDS 1911940 1912245 . + 0 ID=cds-WP_015877514.1;Parent=gene-NIV78_RS25175;Dbxref=Genbank:WP_015877514.1;Name=WP_015877514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003093978.1;locus_tag=NIV78_RS25175;product=ArsR family transcriptional regulator;protein_id=WP_015877514.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1912322 1913383 . + . ID=gene-NIV78_RS25180;Name=NIV78_RS25180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25180 NZ_CP100137.1 Protein Homology CDS 1912322 1913383 . + 0 ID=cds-WP_017423736.1;Parent=gene-NIV78_RS25180;Dbxref=Genbank:WP_017423736.1;Name=WP_017423736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602739.1;locus_tag=NIV78_RS25180;product=alkene reductase;protein_id=WP_017423736.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 1913615 1913993 . + . ID=gene-NIV78_RS25185;Name=NIV78_RS25185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS25185;partial=true;pseudo=true;start_range=.,1913615 NZ_CP100137.1 Protein Homology CDS 1913615 1913993 . + 0 ID=cds-NIV78_RS25185;Parent=gene-NIV78_RS25185;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329556.1;locus_tag=NIV78_RS25185;partial=true;product=carotenoid oxygenase family protein;pseudo=true;start_range=.,1913615;transl_table=11 NZ_CP100137.1 RefSeq gene 1914198 1916483 . - . ID=gene-NIV78_RS25190;Name=NIV78_RS25190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25190 NZ_CP100137.1 Protein Homology CDS 1914198 1916483 . - 0 ID=cds-WP_257757492.1;Parent=gene-NIV78_RS25190;Dbxref=Genbank:WP_257757492.1;Name=WP_257757492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689842.1;locus_tag=NIV78_RS25190;product=NADP-dependent malic enzyme;protein_id=WP_257757492.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1916621 1917589 . + . ID=gene-NIV78_RS25195;Name=NIV78_RS25195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25195 NZ_CP100137.1 Protein Homology CDS 1916621 1917589 . + 0 ID=cds-WP_015877517.1;Parent=gene-NIV78_RS25195;Dbxref=Genbank:WP_015877517.1;Name=WP_015877517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877517.1;locus_tag=NIV78_RS25195;product=LysR substrate-binding domain-containing protein;protein_id=WP_015877517.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1917707 1917841 . - . ID=gene-NIV78_RS25200;Name=NIV78_RS25200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25200 NZ_CP100137.1 Protein Homology CDS 1917707 1917841 . - 0 ID=cds-WP_015877518.1;Parent=gene-NIV78_RS25200;Dbxref=Genbank:WP_015877518.1;Name=WP_015877518.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010109044.1;locus_tag=NIV78_RS25200;product=entericidin A/B family lipoprotein;protein_id=WP_015877518.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1918081 1919373 . + . ID=gene-NIV78_RS25205;Name=NIV78_RS25205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25205 NZ_CP100137.1 Protein Homology CDS 1918081 1919373 . + 0 ID=cds-WP_017423738.1;Parent=gene-NIV78_RS25205;Dbxref=Genbank:WP_017423738.1;Name=WP_017423738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254972.1;locus_tag=NIV78_RS25205;product=aspartate carbamoyltransferase;protein_id=WP_017423738.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1919533 1919679 . + . ID=gene-NIV78_RS25210;Name=NIV78_RS25210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25210 NZ_CP100137.1 Protein Homology CDS 1919533 1919679 . + 0 ID=cds-WP_015877520.1;Parent=gene-NIV78_RS25210;Dbxref=Genbank:WP_015877520.1;Name=WP_015877520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877520.1;locus_tag=NIV78_RS25210;product=hypothetical protein;protein_id=WP_015877520.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1919942 1921843 . + . ID=gene-NIV78_RS25215;Name=NIV78_RS25215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25215 NZ_CP100137.1 Protein Homology CDS 1919942 1921843 . + 0 ID=cds-WP_015877521.1;Parent=gene-NIV78_RS25215;Dbxref=Genbank:WP_015877521.1;Name=WP_015877521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423739.1;locus_tag=NIV78_RS25215;product=penicillin-binding protein 2;protein_id=WP_015877521.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1921955 1922170 . - . ID=gene-NIV78_RS25220;Name=NIV78_RS25220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25220 NZ_CP100137.1 Protein Homology CDS 1921955 1922170 . - 0 ID=cds-WP_015877522.1;Parent=gene-NIV78_RS25220;Dbxref=Genbank:WP_015877522.1;Name=WP_015877522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877522.1;locus_tag=NIV78_RS25220;product=DUF3820 family protein;protein_id=WP_015877522.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1922191 1922505 . - . ID=gene-NIV78_RS25225;Name=NIV78_RS25225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25225 NZ_CP100137.1 Protein Homology CDS 1922191 1922505 . - 0 ID=cds-WP_015877523.1;Parent=gene-NIV78_RS25225;Dbxref=Genbank:WP_015877523.1;Name=WP_015877523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481895.1;locus_tag=NIV78_RS25225;product=hypothetical protein;protein_id=WP_015877523.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1922677 1925262 . - . ID=gene-NIV78_RS25230;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=NIV78_RS25230 NZ_CP100137.1 Protein Homology CDS 1922677 1925262 . - 0 ID=cds-WP_015877524.1;Parent=gene-NIV78_RS25230;Dbxref=Genbank:WP_015877524.1;Name=WP_015877524.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnB;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697921.1;locus_tag=NIV78_RS25230;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_015877524.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1925894 1927612 . - . ID=gene-NIV78_RS25235;Name=NIV78_RS25235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25235 NZ_CP100137.1 Protein Homology CDS 1925894 1927612 . - 0 ID=cds-WP_015877525.1;Parent=gene-NIV78_RS25235;Dbxref=Genbank:WP_015877525.1;Name=WP_015877525.1;Ontology_term=GO:0006812,GO:0055085,GO:0015299,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=solute:proton antiporter activity|0015299||IEA;go_process=cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877525.1;locus_tag=NIV78_RS25235;product=cation:proton antiporter;protein_id=WP_015877525.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1927735 1928481 . - . ID=gene-NIV78_RS25240;Name=NIV78_RS25240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25240 NZ_CP100137.1 Protein Homology CDS 1927735 1928481 . - 0 ID=cds-WP_015877526.1;Parent=gene-NIV78_RS25240;Dbxref=Genbank:WP_015877526.1;Name=WP_015877526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877526.1;locus_tag=NIV78_RS25240;product=NAD-dependent deacetylase;protein_id=WP_015877526.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1928696 1929646 . - . ID=gene-NIV78_RS25245;Name=NIV78_RS25245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25245 NZ_CP100137.1 Protein Homology CDS 1928696 1929646 . - 0 ID=cds-WP_251107932.1;Parent=gene-NIV78_RS25245;Dbxref=Genbank:WP_251107932.1;Name=WP_251107932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689831.1;locus_tag=NIV78_RS25245;product=iron chelate uptake ABC transporter family permease subunit;protein_id=WP_251107932.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1929761 1930702 . - . ID=gene-NIV78_RS25250;Name=NIV78_RS25250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25250 NZ_CP100137.1 Protein Homology CDS 1929761 1930702 . - 0 ID=cds-WP_198292473.1;Parent=gene-NIV78_RS25250;Dbxref=Genbank:WP_198292473.1;Name=WP_198292473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877528.1;locus_tag=NIV78_RS25250;product=ABC transporter substrate-binding protein;protein_id=WP_198292473.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1930776 1931561 . - . ID=gene-NIV78_RS25255;Name=NIV78_RS25255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25255 NZ_CP100137.1 Protein Homology CDS 1930776 1931561 . - 0 ID=cds-WP_015877529.1;Parent=gene-NIV78_RS25255;Dbxref=Genbank:WP_015877529.1;Name=WP_015877529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877529.1;locus_tag=NIV78_RS25255;product=ABC transporter ATP-binding protein;protein_id=WP_015877529.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1931572 1933770 . - . ID=gene-NIV78_RS25260;Name=NIV78_RS25260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25260 NZ_CP100137.1 Protein Homology CDS 1931572 1933770 . - 0 ID=cds-WP_236577930.1;Parent=gene-NIV78_RS25260;Dbxref=Genbank:WP_236577930.1;Name=WP_236577930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877530.1;locus_tag=NIV78_RS25260;product=TonB-dependent siderophore receptor;protein_id=WP_236577930.1;transl_table=11 NZ_CP100137.1 cmsearch riboswitch 1934251 1934330 . - . ID=id-NZ_CP100137.1:1934251..1934330;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP100137.1 RefSeq gene 1934616 1936697 . + . ID=gene-NIV78_RS25265;Name=NIV78_RS25265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25265 NZ_CP100137.1 Protein Homology CDS 1934616 1936697 . + 0 ID=cds-WP_017924228.1;Parent=gene-NIV78_RS25265;Dbxref=Genbank:WP_017924228.1;Name=WP_017924228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877531.1;locus_tag=NIV78_RS25265;product=bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_017924228.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1936881 1937225 . - . ID=gene-NIV78_RS25270;Name=NIV78_RS25270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25270 NZ_CP100137.1 Protein Homology CDS 1936881 1937225 . - 0 ID=cds-WP_015877532.1;Parent=gene-NIV78_RS25270;Dbxref=Genbank:WP_015877532.1;Name=WP_015877532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877532.1;locus_tag=NIV78_RS25270;product=hypothetical protein;protein_id=WP_015877532.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1937352 1937855 . - . ID=gene-NIV78_RS25275;Name=NIV78_RS25275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25275 NZ_CP100137.1 Protein Homology CDS 1937352 1937855 . - 0 ID=cds-WP_015877533.1;Parent=gene-NIV78_RS25275;Dbxref=Genbank:WP_015877533.1;Name=WP_015877533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877533.1;locus_tag=NIV78_RS25275;product=hypothetical protein;protein_id=WP_015877533.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1937861 1938256 . - . ID=gene-NIV78_RS25280;Name=NIV78_RS25280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25280 NZ_CP100137.1 Protein Homology CDS 1937861 1938256 . - 0 ID=cds-WP_254225443.1;Parent=gene-NIV78_RS25280;Dbxref=Genbank:WP_254225443.1;Name=WP_254225443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689823.1;locus_tag=NIV78_RS25280;product=hypothetical protein;protein_id=WP_254225443.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1938615 1939799 . + . ID=gene-NIV78_RS25285;Name=NIV78_RS25285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25285 NZ_CP100137.1 Protein Homology CDS 1938615 1939799 . + 0 ID=cds-WP_251107791.1;Parent=gene-NIV78_RS25285;Dbxref=Genbank:WP_251107791.1;Name=WP_251107791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877535.1;locus_tag=NIV78_RS25285;product=iron-containing alcohol dehydrogenase;protein_id=WP_251107791.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1940008 1940496 . - . ID=gene-NIV78_RS25290;Name=NIV78_RS25290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25290 NZ_CP100137.1 GeneMarkS-2+ CDS 1940008 1940496 . - 0 ID=cds-WP_035979638.1;Parent=gene-NIV78_RS25290;Dbxref=Genbank:WP_035979638.1;Name=WP_035979638.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS25290;product=hypothetical protein;protein_id=WP_035979638.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1941099 1941920 . + . ID=gene-NIV78_RS25295;Name=NIV78_RS25295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25295 NZ_CP100137.1 Protein Homology CDS 1941099 1941920 . + 0 ID=cds-WP_251107790.1;Parent=gene-NIV78_RS25295;Dbxref=Genbank:WP_251107790.1;Name=WP_251107790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877536.1;locus_tag=NIV78_RS25295;product=transporter substrate-binding domain-containing protein;protein_id=WP_251107790.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1941964 1942650 . + . ID=gene-NIV78_RS25300;Name=NIV78_RS25300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25300 NZ_CP100137.1 Protein Homology CDS 1941964 1942650 . + 0 ID=cds-WP_015877537.1;Parent=gene-NIV78_RS25300;Dbxref=Genbank:WP_015877537.1;Name=WP_015877537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484385.1;locus_tag=NIV78_RS25300;product=amino acid ABC transporter permease;protein_id=WP_015877537.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1942647 1943297 . + . ID=gene-NIV78_RS25305;Name=NIV78_RS25305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25305 NZ_CP100137.1 Protein Homology CDS 1942647 1943297 . + 0 ID=cds-WP_017924727.1;Parent=gene-NIV78_RS25305;Dbxref=Genbank:WP_017924727.1;Name=WP_017924727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010097593.1;locus_tag=NIV78_RS25305;product=amino acid ABC transporter permease;protein_id=WP_017924727.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1943284 1944006 . + . ID=gene-NIV78_RS25310;Name=NIV78_RS25310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25310 NZ_CP100137.1 Protein Homology CDS 1943284 1944006 . + 0 ID=cds-WP_015877539.1;Parent=gene-NIV78_RS25310;Dbxref=Genbank:WP_015877539.1;Name=WP_015877539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017234024.1;locus_tag=NIV78_RS25310;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_015877539.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1944312 1944554 . + . ID=gene-NIV78_RS25315;Name=NIV78_RS25315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25315 NZ_CP100137.1 Protein Homology CDS 1944312 1944554 . + 0 ID=cds-WP_017925049.1;Parent=gene-NIV78_RS25315;Dbxref=Genbank:WP_017925049.1;Name=WP_017925049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877540.1;locus_tag=NIV78_RS25315;product=hypothetical protein;protein_id=WP_017925049.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1944798 1945160 . + . ID=gene-NIV78_RS25320;Name=NIV78_RS25320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25320 NZ_CP100137.1 Protein Homology CDS 1944798 1945160 . + 0 ID=cds-WP_015877541.1;Parent=gene-NIV78_RS25320;Dbxref=Genbank:WP_015877541.1;Name=WP_015877541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877541.1;locus_tag=NIV78_RS25320;product=DUF2946 family protein;protein_id=WP_015877541.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1945301 1945945 . + . ID=gene-NIV78_RS25325;Name=NIV78_RS25325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25325 NZ_CP100137.1 Protein Homology CDS 1945301 1945945 . + 0 ID=cds-WP_015877542.1;Parent=gene-NIV78_RS25325;Dbxref=Genbank:WP_015877542.1;Name=WP_015877542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424467.1;locus_tag=NIV78_RS25325;product=SCO family protein;protein_id=WP_015877542.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1945993 1946439 . + . ID=gene-NIV78_RS25330;Name=NIV78_RS25330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25330 NZ_CP100137.1 Protein Homology CDS 1945993 1946439 . + 0 ID=cds-WP_015877543.1;Parent=gene-NIV78_RS25330;Dbxref=Genbank:WP_015877543.1;Name=WP_015877543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877543.1;locus_tag=NIV78_RS25330;product=copper chaperone PCu(A)C;protein_id=WP_015877543.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1946492 1946860 . + . ID=gene-NIV78_RS25335;Name=NIV78_RS25335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25335 NZ_CP100137.1 Protein Homology CDS 1946492 1946860 . + 0 ID=cds-WP_015877544.1;Parent=gene-NIV78_RS25335;Dbxref=Genbank:WP_015877544.1;Name=WP_015877544.1;Ontology_term=GO:0005507,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_function=copper ion binding|0005507||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877544.1;locus_tag=NIV78_RS25335;product=copper resistance protein CopC;protein_id=WP_015877544.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1946982 1947380 . - . ID=gene-NIV78_RS25340;Name=NIV78_RS25340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25340 NZ_CP100137.1 Protein Homology CDS 1946982 1947380 . - 0 ID=cds-WP_043226658.1;Parent=gene-NIV78_RS25340;Dbxref=Genbank:WP_043226658.1;Name=WP_043226658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877545.1;locus_tag=NIV78_RS25340;product=RidA family protein;protein_id=WP_043226658.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1947482 1949605 . - . ID=gene-NIV78_RS25345;Name=NIV78_RS25345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25345 NZ_CP100137.1 Protein Homology CDS 1947482 1949605 . - 0 ID=cds-WP_251107789.1;Parent=gene-NIV78_RS25345;Dbxref=Genbank:WP_251107789.1;Name=WP_251107789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877546.1;locus_tag=NIV78_RS25345;product=TonB-dependent receptor;protein_id=WP_251107789.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1949676 1951307 . - . ID=gene-NIV78_RS25350;Name=NIV78_RS25350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25350 NZ_CP100137.1 Protein Homology CDS 1949676 1951307 . - 0 ID=cds-WP_251107788.1;Parent=gene-NIV78_RS25350;Dbxref=Genbank:WP_251107788.1;Name=WP_251107788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010099945.1;locus_tag=NIV78_RS25350;product=PepSY domain-containing protein;protein_id=WP_251107788.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1951484 1951978 . - . ID=gene-NIV78_RS25355;Name=NIV78_RS25355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25355 NZ_CP100137.1 Protein Homology CDS 1951484 1951978 . - 0 ID=cds-WP_017425016.1;Parent=gene-NIV78_RS25355;Dbxref=Genbank:WP_017425016.1;Name=WP_017425016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425016.1;locus_tag=NIV78_RS25355;product=hypothetical protein;protein_id=WP_017425016.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1952217 1952684 . + . ID=gene-NIV78_RS25360;Name=NIV78_RS25360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25360 NZ_CP100137.1 GeneMarkS-2+ CDS 1952217 1952684 . + 0 ID=cds-WP_251107787.1;Parent=gene-NIV78_RS25360;Dbxref=Genbank:WP_251107787.1;Name=WP_251107787.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS25360;product=hypothetical protein;protein_id=WP_251107787.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1952952 1955069 . + . ID=gene-NIV78_RS25365;Name=NIV78_RS25365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25365 NZ_CP100137.1 Protein Homology CDS 1952952 1955069 . + 0 ID=cds-WP_251107786.1;Parent=gene-NIV78_RS25365;Dbxref=Genbank:WP_251107786.1;Name=WP_251107786.1;Ontology_term=GO:0015891,GO:0015343,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=siderophore transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424696.1;locus_tag=NIV78_RS25365;product=TonB-dependent siderophore receptor;protein_id=WP_251107786.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1955091 1956224 . - . ID=gene-NIV78_RS25370;Name=NIV78_RS25370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25370 NZ_CP100137.1 Protein Homology CDS 1955091 1956224 . - 0 ID=cds-WP_015877550.1;Parent=gene-NIV78_RS25370;Dbxref=Genbank:WP_015877550.1;Name=WP_015877550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877550.1;locus_tag=NIV78_RS25370;product=porin;protein_id=WP_015877550.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1956519 1957976 . - . ID=gene-NIV78_RS25375;Name=NIV78_RS25375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25375 NZ_CP100137.1 Protein Homology CDS 1956519 1957976 . - 0 ID=cds-WP_015877551.1;Parent=gene-NIV78_RS25375;Dbxref=Genbank:WP_015877551.1;Name=WP_015877551.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877551.1;locus_tag=NIV78_RS25375;product=cytosine permease;protein_id=WP_015877551.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1958061 1958471 . - . ID=gene-NIV78_RS25380;Name=NIV78_RS25380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25380 NZ_CP100137.1 Protein Homology CDS 1958061 1958471 . - 0 ID=cds-WP_017923465.1;Parent=gene-NIV78_RS25380;Dbxref=Genbank:WP_017923465.1;Name=WP_017923465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877552.1;locus_tag=NIV78_RS25380;product=nuclear transport factor 2 family protein;protein_id=WP_017923465.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1958723 1959538 . + . ID=gene-NIV78_RS25385;Name=NIV78_RS25385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25385 NZ_CP100137.1 Protein Homology CDS 1958723 1959538 . + 0 ID=cds-WP_017923466.1;Parent=gene-NIV78_RS25385;Dbxref=Genbank:WP_017923466.1;Name=WP_017923466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877553.1;locus_tag=NIV78_RS25385;product=class I SAM-dependent methyltransferase;protein_id=WP_017923466.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1959729 1960319 . + . ID=gene-NIV78_RS25390;Name=NIV78_RS25390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25390 NZ_CP100137.1 Protein Homology CDS 1959729 1960319 . + 0 ID=cds-WP_153479001.1;Parent=gene-NIV78_RS25390;Dbxref=Genbank:WP_153479001.1;Name=WP_153479001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004536930.1;locus_tag=NIV78_RS25390;product=IMPACT family protein;protein_id=WP_153479001.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1960366 1962009 . - . ID=gene-NIV78_RS25395;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=NIV78_RS25395 NZ_CP100137.1 Protein Homology CDS 1960366 1962009 . - 0 ID=cds-WP_236577929.1;Parent=gene-NIV78_RS25395;Dbxref=Genbank:WP_236577929.1;Name=WP_236577929.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=L-threonine ammonia-lyase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877555.1;locus_tag=NIV78_RS25395;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_236577929.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1962217 1963152 . - . ID=gene-NIV78_RS25400;Name=ppk2;gbkey=Gene;gene=ppk2;gene_biotype=protein_coding;locus_tag=NIV78_RS25400 NZ_CP100137.1 Protein Homology CDS 1962217 1963152 . - 0 ID=cds-WP_015877556.1;Parent=gene-NIV78_RS25400;Dbxref=Genbank:WP_015877556.1;Name=WP_015877556.1;Ontology_term=GO:0006793,GO:0008976,GO:0005575;gbkey=CDS;gene=ppk2;go_component=cellular_component|0005575||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=phosphorus metabolic process|0006793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413837.1;locus_tag=NIV78_RS25400;product=polyphosphate kinase 2;protein_id=WP_015877556.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1963572 1963796 . - . ID=gene-NIV78_RS25405;Name=NIV78_RS25405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25405 NZ_CP100137.1 Protein Homology CDS 1963572 1963796 . - 0 ID=cds-WP_015877557.1;Parent=gene-NIV78_RS25405;Dbxref=Genbank:WP_015877557.1;Name=WP_015877557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877557.1;locus_tag=NIV78_RS25405;product=hypothetical protein;protein_id=WP_015877557.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1964378 1964644 . - . ID=gene-NIV78_RS25410;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=NIV78_RS25410 NZ_CP100137.1 Protein Homology CDS 1964378 1964644 . - 0 ID=cds-WP_015877558.1;Parent=gene-NIV78_RS25410;Dbxref=Genbank:WP_015877558.1;Name=WP_015877558.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877558.1;locus_tag=NIV78_RS25410;product=translation initiation factor IF-1;protein_id=WP_015877558.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1964909 1965112 . - . ID=gene-NIV78_RS25415;Name=NIV78_RS25415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25415 NZ_CP100137.1 Protein Homology CDS 1964909 1965112 . - 0 ID=cds-WP_015877559.1;Parent=gene-NIV78_RS25415;Dbxref=Genbank:WP_015877559.1;Name=WP_015877559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003230776.1;locus_tag=NIV78_RS25415;product=cold-shock protein;protein_id=WP_015877559.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1965666 1965950 . + . ID=gene-NIV78_RS25420;Name=NIV78_RS25420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25420 NZ_CP100137.1 Protein Homology CDS 1965666 1965950 . + 0 ID=cds-WP_015877560.1;Parent=gene-NIV78_RS25420;Dbxref=Genbank:WP_015877560.1;Name=WP_015877560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877560.1;locus_tag=NIV78_RS25420;product=hypothetical protein;protein_id=WP_015877560.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1966096 1966989 . + . ID=gene-NIV78_RS25425;Name=NIV78_RS25425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25425 NZ_CP100137.1 Protein Homology CDS 1966096 1966989 . + 0 ID=cds-WP_015877561.1;Parent=gene-NIV78_RS25425;Dbxref=Genbank:WP_015877561.1;Name=WP_015877561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877561.1;locus_tag=NIV78_RS25425;product=LysR family transcriptional regulator;protein_id=WP_015877561.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1967237 1968133 . + . ID=gene-NIV78_RS25430;Name=NIV78_RS25430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25430 NZ_CP100137.1 Protein Homology CDS 1967237 1968133 . + 0 ID=cds-WP_017923705.1;Parent=gene-NIV78_RS25430;Dbxref=Genbank:WP_017923705.1;Name=WP_017923705.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877562.1;locus_tag=NIV78_RS25430;product=dihydrodipicolinate synthase family protein;protein_id=WP_017923705.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1968357 1969174 . - . ID=gene-NIV78_RS25435;Name=NIV78_RS25435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25435 NZ_CP100137.1 Protein Homology CDS 1968826 1969174 . - 0 ID=cds-WP_257757507.1-3;Parent=gene-NIV78_RS25435;Dbxref=Genbank:WP_257757507.1;Name=WP_257757507.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS25435;product=IS5 family transposase;protein_id=WP_257757507.1;transl_table=11 NZ_CP100137.1 Protein Homology CDS 1968357 1968826 . - 2 ID=cds-WP_257757507.1-3;Parent=gene-NIV78_RS25435;Dbxref=Genbank:WP_257757507.1;Name=WP_257757507.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS25435;product=IS5 family transposase;protein_id=WP_257757507.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1969293 1969982 . - . ID=gene-NIV78_RS25440;Name=NIV78_RS25440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25440 NZ_CP100137.1 Protein Homology CDS 1969293 1969982 . - 0 ID=cds-WP_015877563.1;Parent=gene-NIV78_RS25440;Dbxref=Genbank:WP_015877563.1;Name=WP_015877563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877563.1;locus_tag=NIV78_RS25440;product=SDR family oxidoreductase;protein_id=WP_015877563.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1969993 1970805 . - . ID=gene-NIV78_RS25445;Name=NIV78_RS25445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25445 NZ_CP100137.1 Protein Homology CDS 1969993 1970805 . - 0 ID=cds-WP_017923458.1;Parent=gene-NIV78_RS25445;Dbxref=Genbank:WP_017923458.1;Name=WP_017923458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424094.1;locus_tag=NIV78_RS25445;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_017923458.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1970936 1972120 . - . ID=gene-NIV78_RS25450;Name=NIV78_RS25450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25450 NZ_CP100137.1 Protein Homology CDS 1970936 1972120 . - 0 ID=cds-WP_241766882.1;Parent=gene-NIV78_RS25450;Dbxref=Genbank:WP_241766882.1;Name=WP_241766882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424095.1;locus_tag=NIV78_RS25450;product=exo-alpha-sialidase;protein_id=WP_241766882.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1972215 1973624 . - . ID=gene-NIV78_RS25455;Name=NIV78_RS25455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25455 NZ_CP100137.1 Protein Homology CDS 1972215 1973624 . - 0 ID=cds-WP_017923460.1;Parent=gene-NIV78_RS25455;Dbxref=Genbank:WP_017923460.1;Name=WP_017923460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424096.1;locus_tag=NIV78_RS25455;product=sodium:solute symporter family protein;protein_id=WP_017923460.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1973726 1976074 . - . ID=gene-NIV78_RS25460;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=NIV78_RS25460 NZ_CP100137.1 Protein Homology CDS 1973726 1976074 . - 0 ID=cds-WP_153479009.1;Parent=gene-NIV78_RS25460;Dbxref=Genbank:WP_153479009.1;Name=WP_153479009.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877567.1;locus_tag=NIV78_RS25460;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_153479009.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1976071 1977240 . - . ID=gene-NIV78_RS25465;Name=NIV78_RS25465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25465 NZ_CP100137.1 Protein Homology CDS 1976071 1977240 . - 0 ID=cds-WP_015877568.1;Parent=gene-NIV78_RS25465;Dbxref=Genbank:WP_015877568.1;Name=WP_015877568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004629752.1;locus_tag=NIV78_RS25465;product=iron-containing alcohol dehydrogenase;protein_id=WP_015877568.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1977320 1978207 . - . ID=gene-NIV78_RS25470;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=NIV78_RS25470 NZ_CP100137.1 Protein Homology CDS 1977320 1978207 . - 0 ID=cds-WP_251107782.1;Parent=gene-NIV78_RS25470;Dbxref=Genbank:WP_251107782.1;Name=WP_251107782.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877569.1;locus_tag=NIV78_RS25470;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_251107782.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1978332 1979483 . - . ID=gene-NIV78_RS25475;Name=NIV78_RS25475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25475 NZ_CP100137.1 Protein Homology CDS 1978332 1979483 . - 0 ID=cds-WP_017923310.1;Parent=gene-NIV78_RS25475;Dbxref=Genbank:WP_017923310.1;Name=WP_017923310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424099.1;locus_tag=NIV78_RS25475;product=porin;protein_id=WP_017923310.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1980078 1981433 . - . ID=gene-NIV78_RS25480;Name=NIV78_RS25480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25480 NZ_CP100137.1 Protein Homology CDS 1980078 1981433 . - 0 ID=cds-WP_017923311.1;Parent=gene-NIV78_RS25480;Dbxref=Genbank:WP_017923311.1;Name=WP_017923311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877571.1;locus_tag=NIV78_RS25480;product=APC family permease;protein_id=WP_017923311.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1981635 1982474 . - . ID=gene-NIV78_RS25485;Name=NIV78_RS25485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25485 NZ_CP100137.1 Protein Homology CDS 1981635 1982474 . - 0 ID=cds-WP_015877572.1;Parent=gene-NIV78_RS25485;Dbxref=Genbank:WP_015877572.1;Name=WP_015877572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877572.1;locus_tag=NIV78_RS25485;product=carbon-nitrogen hydrolase family protein;protein_id=WP_015877572.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1982612 1983457 . + . ID=gene-NIV78_RS25490;Name=NIV78_RS25490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25490 NZ_CP100137.1 Protein Homology CDS 1982612 1983457 . + 0 ID=cds-WP_017923312.1;Parent=gene-NIV78_RS25490;Dbxref=Genbank:WP_017923312.1;Name=WP_017923312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877573.1;locus_tag=NIV78_RS25490;product=helix-turn-helix transcriptional regulator;protein_id=WP_017923312.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1983750 1988654 . + . ID=gene-NIV78_RS25495;Name=NIV78_RS25495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25495 NZ_CP100137.1 Protein Homology CDS 1983750 1988654 . + 0 ID=cds-WP_251107931.1;Parent=gene-NIV78_RS25495;Dbxref=Genbank:WP_251107931.1;Name=WP_251107931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877574.1;locus_tag=NIV78_RS25495;product=DEAD/DEAH box helicase;protein_id=WP_251107931.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1988758 1989873 . - . ID=gene-NIV78_RS25500;Name=NIV78_RS25500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25500 NZ_CP100137.1 Protein Homology CDS 1988758 1989873 . - 0 ID=cds-WP_153479014.1;Parent=gene-NIV78_RS25500;Dbxref=Genbank:WP_153479014.1;Name=WP_153479014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877575.1;locus_tag=NIV78_RS25500;product=MBL fold metallo-hydrolase;protein_id=WP_153479014.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1989956 1990591 . + . ID=gene-NIV78_RS25505;Name=NIV78_RS25505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25505 NZ_CP100137.1 Protein Homology CDS 1989956 1990591 . + 0 ID=cds-WP_017924504.1;Parent=gene-NIV78_RS25505;Dbxref=Genbank:WP_017924504.1;Name=WP_017924504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877576.1;locus_tag=NIV78_RS25505;product=TetR/AcrR family transcriptional regulator;protein_id=WP_017924504.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 1990737 1991324 . + . ID=gene-NIV78_RS25510;Name=NIV78_RS25510;end_range=1991324,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS25510;partial=true;pseudo=true NZ_CP100137.1 Protein Homology CDS 1990737 1991324 . + 0 ID=cds-NIV78_RS25510;Parent=gene-NIV78_RS25510;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1991324,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018444000.1;locus_tag=NIV78_RS25510;partial=true;product=nucleotidyltransferase family protein;pseudo=true;transl_table=11 NZ_CP100137.1 RefSeq gene 1991680 1992651 . - . ID=gene-NIV78_RS25515;Name=NIV78_RS25515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25515 NZ_CP100137.1 Protein Homology CDS 1991680 1992651 . - 0 ID=cds-WP_100556320.1;Parent=gene-NIV78_RS25515;Dbxref=Genbank:WP_100556320.1;Name=WP_100556320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877578.1;locus_tag=NIV78_RS25515;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_100556320.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1992857 1993525 . + . ID=gene-NIV78_RS25520;Name=NIV78_RS25520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25520 NZ_CP100137.1 Protein Homology CDS 1992857 1993525 . + 0 ID=cds-WP_257757511.1;Parent=gene-NIV78_RS25520;Dbxref=Genbank:WP_257757511.1;Name=WP_257757511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877579.1;locus_tag=NIV78_RS25520;product=DsbA family oxidoreductase;protein_id=WP_257757511.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1993664 1994380 . + . ID=gene-NIV78_RS25525;Name=NIV78_RS25525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25525 NZ_CP100137.1 Protein Homology CDS 1993664 1994380 . + 0 ID=cds-WP_017924280.1;Parent=gene-NIV78_RS25525;Dbxref=Genbank:WP_017924280.1;Name=WP_017924280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877580.1;locus_tag=NIV78_RS25525;product=GNAT family N-acetyltransferase;protein_id=WP_017924280.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1994490 1995158 . - . ID=gene-NIV78_RS25530;Name=NIV78_RS25530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25530 NZ_CP100137.1 Protein Homology CDS 1994490 1995158 . - 0 ID=cds-WP_051071200.1;Parent=gene-NIV78_RS25530;Dbxref=Genbank:WP_051071200.1;Name=WP_051071200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877581.1;locus_tag=NIV78_RS25530;product=DNA-3-methyladenine glycosylase I;protein_id=WP_051071200.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1995182 1996693 . - . ID=gene-NIV78_RS25535;Name=NIV78_RS25535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25535 NZ_CP100137.1 Protein Homology CDS 1995182 1996693 . - 0 ID=cds-WP_169511659.1;Parent=gene-NIV78_RS25535;Dbxref=Genbank:WP_169511659.1;Name=WP_169511659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877582.1;locus_tag=NIV78_RS25535;product=HAMP domain-containing histidine kinase;protein_id=WP_169511659.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1996693 1997427 . - . ID=gene-NIV78_RS25540;Name=NIV78_RS25540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25540 NZ_CP100137.1 Protein Homology CDS 1996693 1997427 . - 0 ID=cds-WP_017924204.1;Parent=gene-NIV78_RS25540;Dbxref=Genbank:WP_017924204.1;Name=WP_017924204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425458.1;locus_tag=NIV78_RS25540;product=response regulator transcription factor;protein_id=WP_017924204.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1997782 1998285 . + . ID=gene-NIV78_RS25545;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=NIV78_RS25545 NZ_CP100137.1 Protein Homology CDS 1997782 1998285 . + 0 ID=cds-WP_251107780.1;Parent=gene-NIV78_RS25545;Dbxref=Genbank:WP_251107780.1;Name=WP_251107780.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425457.1;locus_tag=NIV78_RS25545;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_251107780.1;transl_table=11 NZ_CP100137.1 RefSeq gene 1998332 2000368 . + . ID=gene-NIV78_RS25550;Name=NIV78_RS25550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25550 NZ_CP100137.1 Protein Homology CDS 1998332 2000368 . + 0 ID=cds-WP_251107779.1;Parent=gene-NIV78_RS25550;Dbxref=Genbank:WP_251107779.1;Name=WP_251107779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498597.1;locus_tag=NIV78_RS25550;product=redoxin family protein;protein_id=WP_251107779.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2000412 2001176 . + . ID=gene-NIV78_RS25555;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=NIV78_RS25555 NZ_CP100137.1 Protein Homology CDS 2000412 2001176 . + 0 ID=cds-WP_015877586.1;Parent=gene-NIV78_RS25555;Dbxref=Genbank:WP_015877586.1;Name=WP_015877586.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689739.1;locus_tag=NIV78_RS25555;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_015877586.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2001292 2002188 . - . ID=gene-NIV78_RS25560;Name=blaOXA;gbkey=Gene;gene=blaOXA;gene_biotype=protein_coding;locus_tag=NIV78_RS25560 NZ_CP100137.1 Protein Homology CDS 2001292 2002188 . - 0 ID=cds-WP_015877587.1;Parent=gene-NIV78_RS25560;Dbxref=Genbank:WP_015877587.1;Name=WP_015877587.1;Ontology_term=GO:0008658,GO:0008800;gbkey=CDS;gene=blaOXA;go_function=penicillin binding|0008658||IEA,beta-lactamase activity|0008800||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006391197.1;locus_tag=NIV78_RS25560;product=class D beta-lactamase;protein_id=WP_015877587.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2002285 2002785 . - . ID=gene-NIV78_RS25565;Name=NIV78_RS25565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25565 NZ_CP100137.1 Protein Homology CDS 2002285 2002785 . - 0 ID=cds-WP_015877588.1;Parent=gene-NIV78_RS25565;Dbxref=Genbank:WP_015877588.1;Name=WP_015877588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877588.1;locus_tag=NIV78_RS25565;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_015877588.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2003077 2003637 . + . ID=gene-NIV78_RS25570;Name=NIV78_RS25570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25570 NZ_CP100137.1 Protein Homology CDS 2003077 2003637 . + 0 ID=cds-WP_015877589.1;Parent=gene-NIV78_RS25570;Dbxref=Genbank:WP_015877589.1;Name=WP_015877589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689736.1;locus_tag=NIV78_RS25570;product=DUF4337 domain-containing protein;protein_id=WP_015877589.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 2003688 2003846 . + . ID=gene-NIV78_RS25575;Name=NIV78_RS25575;end_range=2003846,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS25575;partial=true;pseudo=true;start_range=.,2003688 NZ_CP100137.1 Protein Homology CDS 2003688 2003846 . + 0 ID=cds-NIV78_RS25575;Parent=gene-NIV78_RS25575;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2003846,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611183.1;locus_tag=NIV78_RS25575;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,2003688;transl_table=11 NZ_CP100137.1 RefSeq gene 2003868 2004365 . - . ID=gene-NIV78_RS25580;Name=NIV78_RS25580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25580 NZ_CP100137.1 GeneMarkS-2+ CDS 2003868 2004365 . - 0 ID=cds-WP_015877590.1;Parent=gene-NIV78_RS25580;Dbxref=Genbank:WP_015877590.1;Name=WP_015877590.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS25580;product=hypothetical protein;protein_id=WP_015877590.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 2005132 2006150 . + . ID=gene-NIV78_RS25585;Name=NIV78_RS25585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS25585;pseudo=true NZ_CP100137.1 Protein Homology CDS 2005132 2006150 . + 0 ID=cds-NIV78_RS25585;Parent=gene-NIV78_RS25585;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012428439.1;locus_tag=NIV78_RS25585;product=linear amide C-N hydrolase;pseudo=true;transl_table=11 NZ_CP100137.1 RefSeq gene 2006493 2007227 . + . ID=gene-NIV78_RS25590;Name=NIV78_RS25590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25590 NZ_CP100137.1 Protein Homology CDS 2006493 2007227 . + 0 ID=cds-WP_015877591.1;Parent=gene-NIV78_RS25590;Dbxref=Genbank:WP_015877591.1;Name=WP_015877591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877591.1;locus_tag=NIV78_RS25590;product=SDR family oxidoreductase;protein_id=WP_015877591.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2007271 2008119 . + . ID=gene-NIV78_RS25595;Name=NIV78_RS25595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25595 NZ_CP100137.1 Protein Homology CDS 2007271 2008119 . + 0 ID=cds-WP_015877592.1;Parent=gene-NIV78_RS25595;Dbxref=Genbank:WP_015877592.1;Name=WP_015877592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689730.1;locus_tag=NIV78_RS25595;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_015877592.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2008161 2008874 . + . ID=gene-NIV78_RS25600;Name=NIV78_RS25600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25600 NZ_CP100137.1 Protein Homology CDS 2008161 2008874 . + 0 ID=cds-WP_015877593.1;Parent=gene-NIV78_RS25600;Dbxref=Genbank:WP_015877593.1;Name=WP_015877593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877593.1;locus_tag=NIV78_RS25600;product=FadR family transcriptional regulator;protein_id=WP_015877593.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2008963 2010747 . - . ID=gene-NIV78_RS25605;Name=NIV78_RS25605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25605 NZ_CP100137.1 Protein Homology CDS 2008963 2010747 . - 0 ID=cds-WP_015877594.1;Parent=gene-NIV78_RS25605;Dbxref=Genbank:WP_015877594.1;Name=WP_015877594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217270.1;locus_tag=NIV78_RS25605;product=dihydroxy-acid dehydratase family protein;protein_id=WP_015877594.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2011333 2012010 . - . ID=gene-NIV78_RS25610;Name=NIV78_RS25610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25610 NZ_CP100137.1 Protein Homology CDS 2011333 2012010 . - 0 ID=cds-WP_015877595.1;Parent=gene-NIV78_RS25610;Dbxref=Genbank:WP_015877595.1;Name=WP_015877595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877595.1;locus_tag=NIV78_RS25610;product=OmpA family protein;protein_id=WP_015877595.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2012023 2012787 . - . ID=gene-NIV78_RS25615;Name=NIV78_RS25615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25615 NZ_CP100137.1 Protein Homology CDS 2012023 2012787 . - 0 ID=cds-WP_015877596.1;Parent=gene-NIV78_RS25615;Dbxref=Genbank:WP_015877596.1;Name=WP_015877596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020068275.1;locus_tag=NIV78_RS25615;product=flagellar motor protein;protein_id=WP_015877596.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2012818 2014062 . - . ID=gene-NIV78_RS25620;Name=NIV78_RS25620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25620 NZ_CP100137.1 Protein Homology CDS 2012818 2014062 . - 0 ID=cds-WP_015877597.1;Parent=gene-NIV78_RS25620;Dbxref=Genbank:WP_015877597.1;Name=WP_015877597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877597.1;locus_tag=NIV78_RS25620;product=cyclic nucleotide-binding domain-containing protein;protein_id=WP_015877597.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2014349 2016070 . - . ID=gene-NIV78_RS25625;Name=NIV78_RS25625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25625 NZ_CP100137.1 Protein Homology CDS 2014349 2016070 . - 0 ID=cds-WP_159372658.1;Parent=gene-NIV78_RS25625;Dbxref=Genbank:WP_159372658.1;Name=WP_159372658.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733754.1;locus_tag=NIV78_RS25625;product=methyl-accepting chemotaxis protein;protein_id=WP_159372658.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2016925 2017068 . - . ID=gene-NIV78_RS25630;Name=NIV78_RS25630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25630 NZ_CP100137.1 GeneMarkS-2+ CDS 2016925 2017068 . - 0 ID=cds-WP_153479024.1;Parent=gene-NIV78_RS25630;Dbxref=Genbank:WP_153479024.1;Name=WP_153479024.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS25630;product=hypothetical protein;protein_id=WP_153479024.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2017141 2017590 . - . ID=gene-NIV78_RS25635;Name=NIV78_RS25635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25635 NZ_CP100137.1 Protein Homology CDS 2017141 2017590 . - 0 ID=cds-WP_015877599.1;Parent=gene-NIV78_RS25635;Dbxref=Genbank:WP_015877599.1;Name=WP_015877599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013591123.1;locus_tag=NIV78_RS25635;product=hypothetical protein;protein_id=WP_015877599.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2017938 2021417 . + . ID=gene-NIV78_RS25640;Name=NIV78_RS25640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25640 NZ_CP100137.1 Protein Homology CDS 2017938 2021417 . + 0 ID=cds-WP_251107776.1;Parent=gene-NIV78_RS25640;Dbxref=Genbank:WP_251107776.1;Name=WP_251107776.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877600.1;locus_tag=NIV78_RS25640;product=DUF3416 domain-containing protein;protein_id=WP_251107776.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2021414 2024869 . + . ID=gene-NIV78_RS25645;Name=treS;gbkey=Gene;gene=treS;gene_biotype=protein_coding;locus_tag=NIV78_RS25645 NZ_CP100137.1 Protein Homology CDS 2021414 2024869 . + 0 ID=cds-WP_169511472.1;Parent=gene-NIV78_RS25645;Dbxref=Genbank:WP_169511472.1;Name=WP_169511472.1;Ontology_term=GO:0005991,GO:0047471;gbkey=CDS;gene=treS;go_function=maltose alpha-D-glucosyltransferase activity|0047471||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877601.1;locus_tag=NIV78_RS25645;product=maltose alpha-D-glucosyltransferase;protein_id=WP_169511472.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2024866 2027064 . + . ID=gene-NIV78_RS25650;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=NIV78_RS25650 NZ_CP100137.1 Protein Homology CDS 2024866 2027064 . + 0 ID=cds-WP_257757514.1;Parent=gene-NIV78_RS25650;Dbxref=Genbank:WP_257757514.1;Name=WP_257757514.1;Ontology_term=GO:0005975,GO:0005978,GO:0003844,GO:0004553,GO:0043169;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,cation binding|0043169||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521799.1;locus_tag=NIV78_RS25650;product=1%2C4-alpha-glucan branching protein GlgB;protein_id=WP_257757514.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2027138 2029435 . + . ID=gene-NIV78_RS25655;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=NIV78_RS25655 NZ_CP100137.1 Protein Homology CDS 2027138 2029435 . + 0 ID=cds-WP_015877603.1;Parent=gene-NIV78_RS25655;Dbxref=Genbank:WP_015877603.1;Name=WP_015877603.1;Ontology_term=GO:0005980,GO:0004133;gbkey=CDS;gene=glgX;go_function=glycogen debranching enzyme activity|0004133||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689722.1;locus_tag=NIV78_RS25655;product=glycogen debranching protein GlgX;protein_id=WP_015877603.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2029468 2031525 . + . ID=gene-NIV78_RS25660;Name=treZ;gbkey=Gene;gene=treZ;gene_biotype=protein_coding;locus_tag=NIV78_RS25660 NZ_CP100137.1 Protein Homology CDS 2029468 2031525 . + 0 ID=cds-WP_251119066.1;Parent=gene-NIV78_RS25660;Dbxref=Genbank:WP_251119066.1;Name=WP_251119066.1;Ontology_term=GO:0005992,GO:0016798;gbkey=CDS;gene=treZ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877604.1;locus_tag=NIV78_RS25660;product=malto-oligosyltrehalose trehalohydrolase;protein_id=WP_251119066.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2031522 2033924 . + . ID=gene-NIV78_RS25665;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=NIV78_RS25665 NZ_CP100137.1 Protein Homology CDS 2031522 2033924 . + 0 ID=cds-WP_251107774.1;Parent=gene-NIV78_RS25665;Dbxref=Genbank:WP_251107774.1;Name=WP_251107774.1;Ontology_term=GO:0005980,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877605.1;locus_tag=NIV78_RS25665;product=4-alpha-glucanotransferase;protein_id=WP_251107774.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2033921 2036722 . + . ID=gene-NIV78_RS25670;Name=treY;gbkey=Gene;gene=treY;gene_biotype=protein_coding;locus_tag=NIV78_RS25670 NZ_CP100137.1 Protein Homology CDS 2033921 2036722 . + 0 ID=cds-WP_251107773.1;Parent=gene-NIV78_RS25670;Dbxref=Genbank:WP_251107773.1;Name=WP_251107773.1;Ontology_term=GO:0005992,GO:0047470;gbkey=CDS;gene=treY;go_function=(1%2C4)-alpha-D-glucan 1-alpha-D-glucosylmutase activity|0047470||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877606.1;locus_tag=NIV78_RS25670;product=malto-oligosyltrehalose synthase;protein_id=WP_251107773.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2036946 2037761 . - . ID=gene-NIV78_RS25675;Name=NIV78_RS25675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25675 NZ_CP100137.1 Protein Homology CDS 2036946 2037761 . - 0 ID=cds-WP_043226753.1;Parent=gene-NIV78_RS25675;Dbxref=Genbank:WP_043226753.1;Name=WP_043226753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877607.1;locus_tag=NIV78_RS25675;product=oxidoreductase;protein_id=WP_043226753.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2037855 2038292 . + . ID=gene-NIV78_RS25680;Name=NIV78_RS25680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25680 NZ_CP100137.1 Protein Homology CDS 2037855 2038292 . + 0 ID=cds-WP_015877608.1;Parent=gene-NIV78_RS25680;Dbxref=Genbank:WP_015877608.1;Name=WP_015877608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877608.1;locus_tag=NIV78_RS25680;product=helix-turn-helix transcriptional regulator;protein_id=WP_015877608.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2038380 2039309 . + . ID=gene-NIV78_RS25685;Name=NIV78_RS25685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25685 NZ_CP100137.1 Protein Homology CDS 2038380 2039309 . + 0 ID=cds-WP_241766931.1;Parent=gene-NIV78_RS25685;Dbxref=Genbank:WP_241766931.1;Name=WP_241766931.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017985.2;locus_tag=NIV78_RS25685;product=DUF1007 family protein;protein_id=WP_241766931.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2039303 2040424 . + . ID=gene-NIV78_RS25690;Name=NIV78_RS25690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25690 NZ_CP100137.1 Protein Homology CDS 2039303 2040424 . + 0 ID=cds-WP_015877610.1;Parent=gene-NIV78_RS25690;Dbxref=Genbank:WP_015877610.1;Name=WP_015877610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877610.1;locus_tag=NIV78_RS25690;product=high frequency lysogenization protein HflD;protein_id=WP_015877610.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2040835 2042073 . - . ID=gene-NIV78_RS25695;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=NIV78_RS25695 NZ_CP100137.1 Protein Homology CDS 2040835 2042073 . - 0 ID=cds-WP_015877611.1;Parent=gene-NIV78_RS25695;Dbxref=Genbank:WP_015877611.1;Name=WP_015877611.1;Ontology_term=GO:0015036,GO:0005737;gbkey=CDS;gene=trxA;go_component=cytoplasm|0005737||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733852.1;locus_tag=NIV78_RS25695;product=thioredoxin;protein_id=WP_015877611.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2042155 2042607 . - . ID=gene-NIV78_RS25700;Name=NIV78_RS25700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25700 NZ_CP100137.1 Protein Homology CDS 2042155 2042607 . - 0 ID=cds-WP_257757515.1;Parent=gene-NIV78_RS25700;Dbxref=Genbank:WP_257757515.1;Name=WP_257757515.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=NIV78_RS25700;product=ATP-binding cassette domain-containing protein;protein_id=WP_257757515.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 2042648 2042986 . - . ID=gene-NIV78_RS25705;Name=NIV78_RS25705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS25705;partial=true;pseudo=true;start_range=.,2042648 NZ_CP100137.1 Protein Homology CDS 2042648 2042986 . - 0 ID=cds-NIV78_RS25705;Parent=gene-NIV78_RS25705;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017775.2;locus_tag=NIV78_RS25705;partial=true;product=ABC transporter ATP-binding protein/permease;pseudo=true;start_range=.,2042648;transl_table=11 NZ_CP100137.1 RefSeq gene 2044280 2044966 . - . ID=gene-NIV78_RS25710;Name=NIV78_RS25710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25710 NZ_CP100137.1 Protein Homology CDS 2044280 2044966 . - 0 ID=cds-WP_080630264.1;Parent=gene-NIV78_RS25710;Dbxref=Genbank:WP_080630264.1;Name=WP_080630264.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013382.2;locus_tag=NIV78_RS25710;product=class I SAM-dependent methyltransferase;protein_id=WP_080630264.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 2045469 2045564 . + . ID=gene-NIV78_RS25715;Name=NIV78_RS25715;end_range=2045564,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS25715;partial=true;pseudo=true NZ_CP100137.1 Protein Homology CDS 2045469 2045564 . + 0 ID=cds-NIV78_RS25715;Parent=gene-NIV78_RS25715;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2045564,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611479.1;locus_tag=NIV78_RS25715;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP100137.1 RefSeq gene 2045705 2046214 . - . ID=gene-NIV78_RS25720;Name=NIV78_RS25720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25720 NZ_CP100137.1 Protein Homology CDS 2045705 2046214 . - 0 ID=cds-WP_017423816.1;Parent=gene-NIV78_RS25720;Dbxref=Genbank:WP_017423816.1;Name=WP_017423816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423816.1;locus_tag=NIV78_RS25720;product=dihydrofolate reductase;protein_id=WP_017423816.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2046371 2046865 . + . ID=gene-NIV78_RS25725;Name=NIV78_RS25725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25725 NZ_CP100137.1 Protein Homology CDS 2046371 2046865 . + 0 ID=cds-WP_080630169.1;Parent=gene-NIV78_RS25725;Dbxref=Genbank:WP_080630169.1;Name=WP_080630169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697439.1;locus_tag=NIV78_RS25725;product=GNAT family N-acetyltransferase;protein_id=WP_080630169.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 2046988 2047607 . + . ID=gene-NIV78_RS25730;Name=NIV78_RS25730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS25730;pseudo=true NZ_CP100137.1 Protein Homology CDS 2046988 2047607 . + 0 ID=cds-NIV78_RS25730;Parent=gene-NIV78_RS25730;Note=frameshifted;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011493945.1;locus_tag=NIV78_RS25730;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_CP100137.1 RefSeq gene 2047817 2048359 . - . ID=gene-NIV78_RS25735;Name=NIV78_RS25735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25735 NZ_CP100137.1 Protein Homology CDS 2047817 2048359 . - 0 ID=cds-WP_159372655.1;Parent=gene-NIV78_RS25735;Dbxref=Genbank:WP_159372655.1;Name=WP_159372655.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025054.2;locus_tag=NIV78_RS25735;product=GNAT family N-acetyltransferase;protein_id=WP_159372655.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2048950 2049174 . + . ID=gene-NIV78_RS25740;Name=NIV78_RS25740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25740 NZ_CP100137.1 Protein Homology CDS 2048950 2049174 . + 0 ID=cds-WP_012733511.1;Parent=gene-NIV78_RS25740;Dbxref=Genbank:WP_012733511.1;Name=WP_012733511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423073.1;locus_tag=NIV78_RS25740;product=DUF4260 family protein;protein_id=WP_012733511.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2049370 2050392 . + . ID=gene-NIV78_RS25745;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=NIV78_RS25745 NZ_CP100137.1 Protein Homology CDS 2049370 2050392 . + 0 ID=cds-WP_012733510.1;Parent=gene-NIV78_RS25745;Dbxref=Genbank:WP_012733510.1;Name=WP_012733510.1;Ontology_term=GO:0006436,GO:0004830,GO:0005737;gbkey=CDS;gene=trpS;go_component=cytoplasm|0005737||IEA;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733510.1;locus_tag=NIV78_RS25745;product=tryptophan--tRNA ligase;protein_id=WP_012733510.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2050504 2050890 . - . ID=gene-NIV78_RS25750;Name=NIV78_RS25750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25750 NZ_CP100137.1 GeneMarkS-2+ CDS 2050504 2050890 . - 0 ID=cds-WP_157384115.1;Parent=gene-NIV78_RS25750;Dbxref=Genbank:WP_157384115.1;Name=WP_157384115.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS25750;product=hypothetical protein;protein_id=WP_157384115.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2051527 2051919 . + . ID=gene-NIV78_RS25755;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=NIV78_RS25755 NZ_CP100137.1 Protein Homology CDS 2051527 2051919 . + 0 ID=cds-WP_012733509.1;Parent=gene-NIV78_RS25755;Dbxref=Genbank:WP_012733509.1;Name=WP_012733509.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733509.1;locus_tag=NIV78_RS25755;product=adenosylmethionine decarboxylase;protein_id=WP_012733509.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2051956 2052606 . + . ID=gene-NIV78_RS25760;Name=NIV78_RS25760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25760 NZ_CP100137.1 Protein Homology CDS 2051956 2052606 . + 0 ID=cds-WP_232252179.1;Parent=gene-NIV78_RS25760;Dbxref=Genbank:WP_232252179.1;Name=WP_232252179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733508.1;locus_tag=NIV78_RS25760;product=hypothetical protein;protein_id=WP_232252179.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2052619 2053350 . + . ID=gene-NIV78_RS25765;Name=NIV78_RS25765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25765 NZ_CP100137.1 Protein Homology CDS 2052619 2053350 . + 0 ID=cds-WP_012733507.1;Parent=gene-NIV78_RS25765;Dbxref=Genbank:WP_012733507.1;Name=WP_012733507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733507.1;locus_tag=NIV78_RS25765;product=iron-containing redox enzyme family protein;protein_id=WP_012733507.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2053359 2054435 . + . ID=gene-NIV78_RS25770;Name=NIV78_RS25770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25770 NZ_CP100137.1 Protein Homology CDS 2053359 2054435 . + 0 ID=cds-WP_012733506.1;Parent=gene-NIV78_RS25770;Dbxref=Genbank:WP_012733506.1;Name=WP_012733506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733506.1;locus_tag=NIV78_RS25770;product=DUF3419 family protein;protein_id=WP_012733506.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2054454 2055149 . + . ID=gene-NIV78_RS25775;Name=NIV78_RS25775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25775 NZ_CP100137.1 Protein Homology CDS 2054454 2055149 . + 0 ID=cds-WP_012733505.1;Parent=gene-NIV78_RS25775;Dbxref=Genbank:WP_012733505.1;Name=WP_012733505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733505.1;locus_tag=NIV78_RS25775;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_012733505.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2055201 2056364 . - . ID=gene-NIV78_RS25780;Name=NIV78_RS25780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25780 NZ_CP100137.1 Protein Homology CDS 2055201 2056364 . - 0 ID=cds-WP_012733504.1;Parent=gene-NIV78_RS25780;Dbxref=Genbank:WP_012733504.1;Name=WP_012733504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006461495.1;locus_tag=NIV78_RS25780;product=serine hydrolase;protein_id=WP_012733504.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 2056481 2056699 . - . ID=gene-NIV78_RS25785;Name=NIV78_RS25785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS25785;partial=true;pseudo=true;start_range=.,2056481 NZ_CP100137.1 Protein Homology CDS 2056481 2056699 . - 0 ID=cds-NIV78_RS25785;Parent=gene-NIV78_RS25785;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013105981.1;locus_tag=NIV78_RS25785;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,2056481;transl_table=11 NZ_CP100137.1 RefSeq gene 2056736 2057540 . - . ID=gene-NIV78_RS25790;Name=NIV78_RS25790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25790 NZ_CP100137.1 Protein Homology CDS 2057206 2057540 . - 0 ID=cds-WP_251107606.1;Parent=gene-NIV78_RS25790;Dbxref=Genbank:WP_251107606.1;Name=WP_251107606.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611183.1;locus_tag=NIV78_RS25790;product=IS5 family transposase;protein_id=WP_251107606.1;transl_table=11 NZ_CP100137.1 Protein Homology CDS 2056736 2057207 . - 1 ID=cds-WP_251107606.1;Parent=gene-NIV78_RS25790;Dbxref=Genbank:WP_251107606.1;Name=WP_251107606.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611183.1;locus_tag=NIV78_RS25790;product=IS5 family transposase;protein_id=WP_251107606.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2057422 2057934 . + . ID=gene-NIV78_RS25795;Name=NIV78_RS25795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25795 NZ_CP100137.1 GeneMarkS-2+ CDS 2057422 2057934 . + 0 ID=cds-WP_167539771.1;Parent=gene-NIV78_RS25795;Dbxref=Genbank:WP_167539771.1;Name=WP_167539771.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS25795;product=hypothetical protein;protein_id=WP_167539771.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2058015 2058473 . - . ID=gene-NIV78_RS25800;Name=NIV78_RS25800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25800 NZ_CP100137.1 Protein Homology CDS 2058015 2058473 . - 0 ID=cds-WP_012733503.1;Parent=gene-NIV78_RS25800;Dbxref=Genbank:WP_012733503.1;Name=WP_012733503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733503.1;locus_tag=NIV78_RS25800;product=MarR family transcriptional regulator;protein_id=WP_012733503.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2058528 2059307 . - . ID=gene-NIV78_RS25805;Name=NIV78_RS25805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25805 NZ_CP100137.1 Protein Homology CDS 2058528 2059307 . - 0 ID=cds-WP_017923323.1;Parent=gene-NIV78_RS25805;Dbxref=Genbank:WP_017923323.1;Name=WP_017923323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733502.1;locus_tag=NIV78_RS25805;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_017923323.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2060008 2060277 . + . ID=gene-NIV78_RS25810;Name=NIV78_RS25810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25810 NZ_CP100137.1 GeneMarkS-2+ CDS 2060008 2060277 . + 0 ID=cds-WP_257757521.1;Parent=gene-NIV78_RS25810;Dbxref=Genbank:WP_257757521.1;Name=WP_257757521.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS25810;product=heme-binding protein;protein_id=WP_257757521.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2060506 2061081 . + . ID=gene-NIV78_RS25815;Name=NIV78_RS25815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25815 NZ_CP100137.1 Protein Homology CDS 2060506 2061081 . + 0 ID=cds-WP_012733501.1;Parent=gene-NIV78_RS25815;Dbxref=Genbank:WP_012733501.1;Name=WP_012733501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425138.1;locus_tag=NIV78_RS25815;product=polysaccharide deacetylase family protein;protein_id=WP_012733501.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2061097 2062074 . - . ID=gene-NIV78_RS25820;Name=NIV78_RS25820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25820 NZ_CP100137.1 Protein Homology CDS 2061097 2062074 . - 0 ID=cds-WP_017923322.1;Parent=gene-NIV78_RS25820;Dbxref=Genbank:WP_017923322.1;Name=WP_017923322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733500.1;locus_tag=NIV78_RS25820;product=phosphotransferase;protein_id=WP_017923322.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2062125 2062790 . + . ID=gene-NIV78_RS25825;Name=NIV78_RS25825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25825 NZ_CP100137.1 Protein Homology CDS 2062125 2062790 . + 0 ID=cds-WP_257757523.1;Parent=gene-NIV78_RS25825;Dbxref=Genbank:WP_257757523.1;Name=WP_257757523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656980.1;locus_tag=NIV78_RS25825;product=cephalosporin hydroxylase family protein;protein_id=WP_257757523.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2062747 2063961 . - . ID=gene-NIV78_RS25830;Name=NIV78_RS25830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25830 NZ_CP100137.1 Protein Homology CDS 2062747 2063961 . - 0 ID=cds-WP_017923321.1;Parent=gene-NIV78_RS25830;Dbxref=Genbank:WP_017923321.1;Name=WP_017923321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733498.1;locus_tag=NIV78_RS25830;product=glycosyltransferase;protein_id=WP_017923321.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2063979 2065046 . - . ID=gene-NIV78_RS25835;Name=NIV78_RS25835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25835 NZ_CP100137.1 Protein Homology CDS 2063979 2065046 . - 0 ID=cds-WP_153478642.1;Parent=gene-NIV78_RS25835;Dbxref=Genbank:WP_153478642.1;Name=WP_153478642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733497.1;locus_tag=NIV78_RS25835;product=asparagine synthase-related protein;protein_id=WP_153478642.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2065043 2065912 . - . ID=gene-NIV78_RS25840;Name=NIV78_RS25840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25840 NZ_CP100137.1 Protein Homology CDS 2065043 2065912 . - 0 ID=cds-WP_012733496.1;Parent=gene-NIV78_RS25840;Dbxref=Genbank:WP_012733496.1;Name=WP_012733496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733496.1;locus_tag=NIV78_RS25840;product=4Fe-4S cluster-binding domain-containing protein;protein_id=WP_012733496.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2065914 2066957 . - . ID=gene-NIV78_RS25845;Name=NIV78_RS25845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25845 NZ_CP100137.1 Protein Homology CDS 2065914 2066957 . - 0 ID=cds-WP_017923317.1;Parent=gene-NIV78_RS25845;Dbxref=Genbank:WP_017923317.1;Name=WP_017923317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733495.1;locus_tag=NIV78_RS25845;product=aminoglycoside phosphotransferase;protein_id=WP_017923317.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2066958 2067707 . - . ID=gene-NIV78_RS25850;Name=NIV78_RS25850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25850 NZ_CP100137.1 Protein Homology CDS 2066958 2067707 . - 0 ID=cds-WP_017424803.1;Parent=gene-NIV78_RS25850;Dbxref=Genbank:WP_017424803.1;Name=WP_017424803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549723.1;locus_tag=NIV78_RS25850;product=FkbM family methyltransferase;protein_id=WP_017424803.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2068516 2068971 . + . ID=gene-NIV78_RS25855;Name=NIV78_RS25855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25855 NZ_CP100137.1 Protein Homology CDS 2068516 2068971 . + 0 ID=cds-WP_017424800.1;Parent=gene-NIV78_RS25855;Dbxref=Genbank:WP_017424800.1;Name=WP_017424800.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424800.1;locus_tag=NIV78_RS25855;product=NUDIX domain-containing protein;protein_id=WP_017424800.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2069732 2070526 . + . ID=gene-NIV78_RS25860;Name=NIV78_RS25860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25860 NZ_CP100137.1 Protein Homology CDS 2069732 2070526 . + 0 ID=cds-WP_043225875.1;Parent=gene-NIV78_RS25860;Dbxref=Genbank:WP_043225875.1;Name=WP_043225875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019939907.1;locus_tag=NIV78_RS25860;product=hypothetical protein;protein_id=WP_043225875.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2070823 2071173 . + . ID=gene-NIV78_RS25865;Name=NIV78_RS25865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25865 NZ_CP100137.1 Protein Homology CDS 2070823 2071173 . + 0 ID=cds-WP_017923316.1;Parent=gene-NIV78_RS25865;Dbxref=Genbank:WP_017923316.1;Name=WP_017923316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017923316.1;locus_tag=NIV78_RS25865;product=VOC family protein;protein_id=WP_017923316.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2071430 2071696 . - . ID=gene-NIV78_RS25870;Name=NIV78_RS25870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25870 NZ_CP100137.1 Protein Homology CDS 2071430 2071696 . - 0 ID=cds-WP_080630200.1;Parent=gene-NIV78_RS25870;Dbxref=Genbank:WP_080630200.1;Name=WP_080630200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733487.1;locus_tag=NIV78_RS25870;product=DUF333 domain-containing protein;protein_id=WP_080630200.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2071757 2072110 . - . ID=gene-NIV78_RS25875;Name=NIV78_RS25875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25875 NZ_CP100137.1 GeneMarkS-2+ CDS 2071757 2072110 . - 0 ID=cds-WP_017923315.1;Parent=gene-NIV78_RS25875;Dbxref=Genbank:WP_017923315.1;Name=WP_017923315.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS25875;product=hypothetical protein;protein_id=WP_017923315.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2072391 2073158 . + . ID=gene-NIV78_RS25880;Name=NIV78_RS25880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25880 NZ_CP100137.1 Protein Homology CDS 2072391 2073158 . + 0 ID=cds-WP_012733486.1;Parent=gene-NIV78_RS25880;Dbxref=Genbank:WP_012733486.1;Name=WP_012733486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733486.1;locus_tag=NIV78_RS25880;product=coniferyl-alcohol dehydrogenase;protein_id=WP_012733486.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2073196 2074668 . + . ID=gene-NIV78_RS25885;Name=NIV78_RS25885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25885 NZ_CP100137.1 Protein Homology CDS 2073196 2074668 . + 0 ID=cds-WP_012733485.1;Parent=gene-NIV78_RS25885;Dbxref=Genbank:WP_012733485.1;Name=WP_012733485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008921506.1;locus_tag=NIV78_RS25885;product=benzaldehyde dehydrogenase;protein_id=WP_012733485.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2074740 2075573 . + . ID=gene-NIV78_RS25890;Name=NIV78_RS25890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25890 NZ_CP100137.1 Protein Homology CDS 2074740 2075573 . + 0 ID=cds-WP_012733484.1;Parent=gene-NIV78_RS25890;Dbxref=Genbank:WP_012733484.1;Name=WP_012733484.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733484.1;locus_tag=NIV78_RS25890;product=p-hydroxycinnamoyl CoA hydratase/lyase;protein_id=WP_012733484.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2075592 2077751 . + . ID=gene-NIV78_RS25895;Name=NIV78_RS25895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25895 NZ_CP100137.1 Protein Homology CDS 2075592 2077751 . + 0 ID=cds-WP_017424351.1;Parent=gene-NIV78_RS25895;Dbxref=Genbank:WP_017424351.1;Name=WP_017424351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733483.1;locus_tag=NIV78_RS25895;product=acetate--CoA ligase family protein;protein_id=WP_017424351.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2077805 2078278 . - . ID=gene-NIV78_RS25900;Name=NIV78_RS25900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25900 NZ_CP100137.1 Protein Homology CDS 2077805 2078278 . - 0 ID=cds-WP_017424350.1;Parent=gene-NIV78_RS25900;Dbxref=Genbank:WP_017424350.1;Name=WP_017424350.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424350.1;locus_tag=NIV78_RS25900;product=MarR family transcriptional regulator;protein_id=WP_017424350.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2078633 2079919 . + . ID=gene-NIV78_RS25905;Name=NIV78_RS25905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25905 NZ_CP100137.1 Protein Homology CDS 2078633 2079919 . + 0 ID=cds-WP_017922848.1;Parent=gene-NIV78_RS25905;Dbxref=Genbank:WP_017922848.1;Name=WP_017922848.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008921502.1;locus_tag=NIV78_RS25905;product=MFS transporter;protein_id=WP_017922848.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2080029 2081108 . + . ID=gene-NIV78_RS25910;Name=NIV78_RS25910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25910 NZ_CP100137.1 Protein Homology CDS 2080029 2081108 . + 0 ID=cds-WP_012733480.1;Parent=gene-NIV78_RS25910;Dbxref=Genbank:WP_012733480.1;Name=WP_012733480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752310.1;locus_tag=NIV78_RS25910;product=porin;protein_id=WP_012733480.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2081532 2081963 . - . ID=gene-NIV78_RS25915;Name=NIV78_RS25915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25915 NZ_CP100137.1 Protein Homology CDS 2081532 2081963 . - 0 ID=cds-WP_012733479.1;Parent=gene-NIV78_RS25915;Dbxref=Genbank:WP_012733479.1;Name=WP_012733479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733479.1;locus_tag=NIV78_RS25915;product=hypothetical protein;protein_id=WP_012733479.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2082101 2083576 . - . ID=gene-NIV78_RS25920;Name=NIV78_RS25920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25920 NZ_CP100137.1 Protein Homology CDS 2082101 2083576 . - 0 ID=cds-WP_043225314.1;Parent=gene-NIV78_RS25920;Dbxref=Genbank:WP_043225314.1;Name=WP_043225314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762436.1;locus_tag=NIV78_RS25920;product=hypothetical protein;protein_id=WP_043225314.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2083904 2085049 . - . ID=gene-NIV78_RS25925;Name=NIV78_RS25925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25925 NZ_CP100137.1 Protein Homology CDS 2083904 2085049 . - 0 ID=cds-WP_017922846.1;Parent=gene-NIV78_RS25925;Dbxref=Genbank:WP_017922846.1;Name=WP_017922846.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733477.1;locus_tag=NIV78_RS25925;product=LuxR family transcriptional regulator;protein_id=WP_017922846.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2085559 2086376 . + . ID=gene-NIV78_RS25930;Name=NIV78_RS25930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25930 NZ_CP100137.1 Protein Homology CDS 2085559 2085907 . + 0 ID=cds-WP_257757507.1-4;Parent=gene-NIV78_RS25930;Dbxref=Genbank:WP_257757507.1;Name=WP_257757507.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS25930;product=IS5 family transposase;protein_id=WP_257757507.1;transl_table=11 NZ_CP100137.1 Protein Homology CDS 2085907 2086376 . + 2 ID=cds-WP_257757507.1-4;Parent=gene-NIV78_RS25930;Dbxref=Genbank:WP_257757507.1;Name=WP_257757507.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS25930;product=IS5 family transposase;protein_id=WP_257757507.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 2086421 2086519 . + . ID=gene-NIV78_RS25935;Name=NIV78_RS25935;end_range=2086519,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS25935;partial=true;pseudo=true;start_range=.,2086421 NZ_CP100137.1 Protein Homology CDS 2086421 2086519 . + 0 ID=cds-NIV78_RS25935;Parent=gene-NIV78_RS25935;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006310,GO:0000150,GO:0003677;end_range=2086519,.;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000905001.1;locus_tag=NIV78_RS25935;partial=true;product=recombinase family protein;pseudo=true;start_range=.,2086421;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 2087083 2087755 . + . ID=gene-NIV78_RS25940;Name=NIV78_RS25940;end_range=2087755,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS25940;partial=true;pseudo=true;start_range=.,2087083 NZ_CP100137.1 Protein Homology CDS 2087083 2087755 . + 0 ID=cds-NIV78_RS25940;Parent=gene-NIV78_RS25940;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=2087755,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006492556.1;locus_tag=NIV78_RS25940;partial=true;product=transposase;pseudo=true;start_range=.,2087083;transl_table=11 NZ_CP100137.1 RefSeq gene 2087877 2088962 . - . ID=gene-NIV78_RS25945;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=NIV78_RS25945 NZ_CP100137.1 Protein Homology CDS 2087877 2088962 . - 0 ID=cds-WP_251107917.1;Parent=gene-NIV78_RS25945;Dbxref=Genbank:WP_251107917.1;Name=WP_251107917.1;Ontology_term=GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733475.1;locus_tag=NIV78_RS25945;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_251107917.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2089031 2090011 . - . ID=gene-NIV78_RS25950;Name=NIV78_RS25950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25950 NZ_CP100137.1 Protein Homology CDS 2089031 2090011 . - 0 ID=cds-WP_012733474.1;Parent=gene-NIV78_RS25950;Dbxref=Genbank:WP_012733474.1;Name=WP_012733474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424650.1;locus_tag=NIV78_RS25950;product=SUMF1/EgtB/PvdO family nonheme iron enzyme;protein_id=WP_012733474.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2090119 2091810 . - . ID=gene-NIV78_RS25955;Name=NIV78_RS25955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25955 NZ_CP100137.1 Protein Homology CDS 2090119 2091810 . - 0 ID=cds-WP_257757524.1;Parent=gene-NIV78_RS25955;Dbxref=Genbank:WP_257757524.1;Name=WP_257757524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733473.1;locus_tag=NIV78_RS25955;product=WD40 repeat domain-containing protein;protein_id=WP_257757524.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2091807 2092445 . - . ID=gene-NIV78_RS25960;Name=NIV78_RS25960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25960 NZ_CP100137.1 Protein Homology CDS 2091807 2092445 . - 0 ID=cds-WP_042967738.1;Parent=gene-NIV78_RS25960;Dbxref=Genbank:WP_042967738.1;Name=WP_042967738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696509.1;locus_tag=NIV78_RS25960;product=GTP cyclohydrolase II;protein_id=WP_042967738.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2092567 2093304 . - . ID=gene-NIV78_RS25965;Name=NIV78_RS25965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25965 NZ_CP100137.1 Protein Homology CDS 2092567 2093304 . - 0 ID=cds-WP_012733471.1;Parent=gene-NIV78_RS25965;Dbxref=Genbank:WP_012733471.1;Name=WP_012733471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733471.1;locus_tag=NIV78_RS25965;product=class I SAM-dependent methyltransferase;protein_id=WP_012733471.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2093890 2094795 . - . ID=gene-NIV78_RS25970;Name=NIV78_RS25970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25970 NZ_CP100137.1 Protein Homology CDS 2093890 2094795 . - 0 ID=cds-WP_012733470.1;Parent=gene-NIV78_RS25970;Dbxref=Genbank:WP_012733470.1;Name=WP_012733470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696507.1;locus_tag=NIV78_RS25970;product=LysR family transcriptional regulator;protein_id=WP_012733470.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2094891 2095466 . + . ID=gene-NIV78_RS25975;Name=NIV78_RS25975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25975 NZ_CP100137.1 Protein Homology CDS 2094891 2095466 . + 0 ID=cds-WP_012733469.1;Parent=gene-NIV78_RS25975;Dbxref=Genbank:WP_012733469.1;Name=WP_012733469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733469.1;locus_tag=NIV78_RS25975;product=DMT family transporter;protein_id=WP_012733469.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2095506 2096645 . + . ID=gene-NIV78_RS25980;Name=NIV78_RS25980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25980 NZ_CP100137.1 Protein Homology CDS 2095506 2096645 . + 0 ID=cds-WP_012733468.1;Parent=gene-NIV78_RS25980;Dbxref=Genbank:WP_012733468.1;Name=WP_012733468.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696505.1;locus_tag=NIV78_RS25980;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_012733468.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2096642 2099734 . + . ID=gene-NIV78_RS25985;Name=NIV78_RS25985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25985 NZ_CP100137.1 Protein Homology CDS 2096642 2099734 . + 0 ID=cds-WP_017923781.1;Parent=gene-NIV78_RS25985;Dbxref=Genbank:WP_017923781.1;Name=WP_017923781.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696504.1;locus_tag=NIV78_RS25985;product=efflux RND transporter permease subunit;protein_id=WP_017923781.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2099848 2101326 . + . ID=gene-NIV78_RS25990;Name=NIV78_RS25990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25990 NZ_CP100137.1 Protein Homology CDS 2099848 2101326 . + 0 ID=cds-WP_230674341.1;Parent=gene-NIV78_RS25990;Dbxref=Genbank:WP_230674341.1;Name=WP_230674341.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007736365.1;locus_tag=NIV78_RS25990;product=efflux transporter outer membrane subunit;protein_id=WP_230674341.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2101739 2101963 . - . ID=gene-NIV78_RS25995;Name=NIV78_RS25995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS25995 NZ_CP100137.1 GeneMarkS-2+ CDS 2101739 2101963 . - 0 ID=cds-WP_017924512.1;Parent=gene-NIV78_RS25995;Dbxref=Genbank:WP_017924512.1;Name=WP_017924512.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS25995;product=hypothetical protein;protein_id=WP_017924512.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2102132 2102962 . - . ID=gene-NIV78_RS26000;Name=NIV78_RS26000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26000 NZ_CP100137.1 Protein Homology CDS 2102132 2102962 . - 0 ID=cds-WP_012733464.1;Parent=gene-NIV78_RS26000;Dbxref=Genbank:WP_012733464.1;Name=WP_012733464.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733464.1;locus_tag=NIV78_RS26000;product=LuxR family transcriptional regulator;protein_id=WP_012733464.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2104104 2105297 . - . ID=gene-NIV78_RS26005;Name=NIV78_RS26005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26005 NZ_CP100137.1 Protein Homology CDS 2104104 2105297 . - 0 ID=cds-WP_012733462.1;Parent=gene-NIV78_RS26005;Dbxref=Genbank:WP_012733462.1;Name=WP_012733462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733462.1;locus_tag=NIV78_RS26005;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_012733462.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2105294 2106088 . - . ID=gene-NIV78_RS26010;Name=NIV78_RS26010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26010 NZ_CP100137.1 Protein Homology CDS 2105294 2106088 . - 0 ID=cds-WP_012733461.1;Parent=gene-NIV78_RS26010;Dbxref=Genbank:WP_012733461.1;Name=WP_012733461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733461.1;locus_tag=NIV78_RS26010;product=enoyl-CoA hydratase;protein_id=WP_012733461.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2106085 2106987 . - . ID=gene-NIV78_RS26015;Name=mmsB;gbkey=Gene;gene=mmsB;gene_biotype=protein_coding;locus_tag=NIV78_RS26015 NZ_CP100137.1 Protein Homology CDS 2106085 2106987 . - 0 ID=cds-WP_257757527.1;Parent=gene-NIV78_RS26015;Dbxref=Genbank:WP_257757527.1;Name=WP_257757527.1;Ontology_term=GO:0006574,GO:0008442;gbkey=CDS;gene=mmsB;go_function=3-hydroxyisobutyrate dehydrogenase activity|0008442||IEA;go_process=valine catabolic process|0006574||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733460.1;locus_tag=NIV78_RS26015;product=3-hydroxyisobutyrate dehydrogenase;protein_id=WP_257757527.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2107010 2108539 . - . ID=gene-NIV78_RS26020;Name=NIV78_RS26020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26020 NZ_CP100137.1 Protein Homology CDS 2107010 2108539 . - 0 ID=cds-WP_012733459.1;Parent=gene-NIV78_RS26020;Dbxref=Genbank:WP_012733459.1;Name=WP_012733459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733459.1;locus_tag=NIV78_RS26020;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;protein_id=WP_012733459.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2108623 2110317 . - . ID=gene-NIV78_RS26025;Name=NIV78_RS26025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26025 NZ_CP100137.1 Protein Homology CDS 2108623 2110317 . - 0 ID=cds-WP_012733458.1;Parent=gene-NIV78_RS26025;Dbxref=Genbank:WP_012733458.1;Name=WP_012733458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733458.1;locus_tag=NIV78_RS26025;product=AMP-binding protein;protein_id=WP_012733458.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2110403 2111542 . - . ID=gene-NIV78_RS26030;Name=NIV78_RS26030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26030 NZ_CP100137.1 Protein Homology CDS 2110403 2111542 . - 0 ID=cds-WP_012733457.1;Parent=gene-NIV78_RS26030;Dbxref=Genbank:WP_012733457.1;Name=WP_012733457.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603915.1;locus_tag=NIV78_RS26030;product=acyl-CoA dehydrogenase family protein;protein_id=WP_012733457.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2111667 2112764 . + . ID=gene-NIV78_RS26035;Name=NIV78_RS26035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26035 NZ_CP100137.1 Protein Homology CDS 2111667 2112764 . + 0 ID=cds-WP_251107613.1;Parent=gene-NIV78_RS26035;Dbxref=Genbank:WP_251107613.1;Name=WP_251107613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733456.1;locus_tag=NIV78_RS26035;product=AraC family transcriptional regulator ligand-binding domain-containing protein;protein_id=WP_251107613.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2112935 2113231 . - . ID=gene-NIV78_RS26040;Name=NIV78_RS26040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26040 NZ_CP100137.1 Protein Homology CDS 2112935 2113231 . - 0 ID=cds-WP_012733455.1;Parent=gene-NIV78_RS26040;Dbxref=Genbank:WP_012733455.1;Name=WP_012733455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009897936.1;locus_tag=NIV78_RS26040;product=hypothetical protein;protein_id=WP_012733455.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2113677 2114042 . - . ID=gene-NIV78_RS26045;Name=NIV78_RS26045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26045 NZ_CP100137.1 GeneMarkS-2+ CDS 2113677 2114042 . - 0 ID=cds-WP_257757528.1;Parent=gene-NIV78_RS26045;Dbxref=Genbank:WP_257757528.1;Name=WP_257757528.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS26045;product=hypothetical protein;protein_id=WP_257757528.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2114104 2115405 . + . ID=gene-NIV78_RS26050;Name=NIV78_RS26050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26050 NZ_CP100137.1 Protein Homology CDS 2114104 2115405 . + 0 ID=cds-WP_012733454.1;Parent=gene-NIV78_RS26050;Dbxref=Genbank:WP_012733454.1;Name=WP_012733454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009897941.1;locus_tag=NIV78_RS26050;product=NCS2 family permease;protein_id=WP_012733454.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2115501 2116154 . + . ID=gene-NIV78_RS26055;Name=NIV78_RS26055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26055 NZ_CP100137.1 Protein Homology CDS 2115501 2116154 . + 0 ID=cds-WP_124837127.1;Parent=gene-NIV78_RS26055;Dbxref=Genbank:WP_124837127.1;Name=WP_124837127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424998.1;locus_tag=NIV78_RS26055;product=transglycosylase SLT domain-containing protein;protein_id=WP_124837127.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2116168 2116455 . - . ID=gene-NIV78_RS26060;Name=NIV78_RS26060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26060 NZ_CP100137.1 Protein Homology CDS 2116168 2116455 . - 0 ID=cds-WP_012733452.1;Parent=gene-NIV78_RS26060;Dbxref=Genbank:WP_012733452.1;Name=WP_012733452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733452.1;locus_tag=NIV78_RS26060;product=DUF1488 domain-containing protein;protein_id=WP_012733452.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2116894 2118879 . + . ID=gene-NIV78_RS26065;Name=NIV78_RS26065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26065 NZ_CP100137.1 Protein Homology CDS 2116894 2118879 . + 0 ID=cds-WP_251107614.1;Parent=gene-NIV78_RS26065;Dbxref=Genbank:WP_251107614.1;Name=WP_251107614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733451.1;locus_tag=NIV78_RS26065;product=sigma 54-interacting transcriptional regulator;protein_id=WP_251107614.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2118947 2119258 . + . ID=gene-NIV78_RS26070;Name=NIV78_RS26070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26070 NZ_CP100137.1 Protein Homology CDS 2118947 2119258 . + 0 ID=cds-WP_012733450.1;Parent=gene-NIV78_RS26070;Dbxref=Genbank:WP_012733450.1;Name=WP_012733450.1;Ontology_term=GO:0009055,GO:0051536;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733450.1;locus_tag=NIV78_RS26070;product=2Fe-2S iron-sulfur cluster-binding protein;protein_id=WP_012733450.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2119367 2120638 . + . ID=gene-NIV78_RS26075;Name=NIV78_RS26075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26075 NZ_CP100137.1 Protein Homology CDS 2119367 2120638 . + 0 ID=cds-WP_012733449.1;Parent=gene-NIV78_RS26075;Dbxref=Genbank:WP_012733449.1;Name=WP_012733449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733449.1;locus_tag=NIV78_RS26075;product=FAD-binding oxidoreductase;protein_id=WP_012733449.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2120993 2121283 . + . ID=gene-NIV78_RS26080;Name=NIV78_RS26080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26080 NZ_CP100137.1 Protein Homology CDS 2120993 2121283 . + 0 ID=cds-WP_012733448.1;Parent=gene-NIV78_RS26080;Dbxref=Genbank:WP_012733448.1;Name=WP_012733448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004530068.1;locus_tag=NIV78_RS26080;product=DUF3331 domain-containing protein;protein_id=WP_012733448.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2121812 2122117 . + . ID=gene-NIV78_RS26085;Name=NIV78_RS26085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26085 NZ_CP100137.1 Protein Homology CDS 2121812 2122117 . + 0 ID=cds-WP_012733447.1;Parent=gene-NIV78_RS26085;Dbxref=Genbank:WP_012733447.1;Name=WP_012733447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733447.1;locus_tag=NIV78_RS26085;product=DUF4148 domain-containing protein;protein_id=WP_012733447.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2122541 2122753 . - . ID=gene-NIV78_RS26090;Name=NIV78_RS26090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26090 NZ_CP100137.1 GeneMarkS-2+ CDS 2122541 2122753 . - 0 ID=cds-WP_017924735.1;Parent=gene-NIV78_RS26090;Dbxref=Genbank:WP_017924735.1;Name=WP_017924735.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS26090;product=hypothetical protein;protein_id=WP_017924735.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2122840 2123352 . - . ID=gene-NIV78_RS26095;Name=NIV78_RS26095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26095 NZ_CP100137.1 Protein Homology CDS 2122840 2123352 . - 0 ID=cds-WP_039200730.1;Parent=gene-NIV78_RS26095;Dbxref=Genbank:WP_039200730.1;Name=WP_039200730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027755.1;locus_tag=NIV78_RS26095;product=thioesterase family protein;protein_id=WP_039200730.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2123355 2124320 . - . ID=gene-NIV78_RS26100;Name=NIV78_RS26100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26100 NZ_CP100137.1 Protein Homology CDS 2123355 2124320 . - 0 ID=cds-WP_017924657.1;Parent=gene-NIV78_RS26100;Dbxref=Genbank:WP_017924657.1;Name=WP_017924657.1;Ontology_term=GO:0006631,GO:0016616,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD+ binding|0070403||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484739.1;locus_tag=NIV78_RS26100;product=L-carnitine dehydrogenase;protein_id=WP_017924657.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2124399 2125328 . - . ID=gene-NIV78_RS26105;Name=NIV78_RS26105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26105 NZ_CP100137.1 Protein Homology CDS 2124399 2125328 . - 0 ID=cds-WP_012733444.1;Parent=gene-NIV78_RS26105;Dbxref=Genbank:WP_012733444.1;Name=WP_012733444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396403.1;locus_tag=NIV78_RS26105;product=3-keto-5-aminohexanoate cleavage protein;protein_id=WP_012733444.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2125407 2126351 . - . ID=gene-NIV78_RS26110;Name=NIV78_RS26110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26110 NZ_CP100137.1 Protein Homology CDS 2125407 2126351 . - 0 ID=cds-WP_012733443.1;Parent=gene-NIV78_RS26110;Dbxref=Genbank:WP_012733443.1;Name=WP_012733443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423619.1;locus_tag=NIV78_RS26110;product=choline ABC transporter substrate-binding protein;protein_id=WP_012733443.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2126702 2126992 . + . ID=gene-NIV78_RS26115;Name=NIV78_RS26115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26115 NZ_CP100137.1 Protein Homology CDS 2126702 2126992 . + 0 ID=cds-WP_012733442.1;Parent=gene-NIV78_RS26115;Dbxref=Genbank:WP_012733442.1;Name=WP_012733442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689664.1;locus_tag=NIV78_RS26115;product=DUF1330 domain-containing protein;protein_id=WP_012733442.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2127082 2128026 . + . ID=gene-NIV78_RS26120;Name=NIV78_RS26120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26120 NZ_CP100137.1 Protein Homology CDS 2127082 2128026 . + 0 ID=cds-WP_043225326.1;Parent=gene-NIV78_RS26120;Dbxref=Genbank:WP_043225326.1;Name=WP_043225326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396391.1;locus_tag=NIV78_RS26120;product=GlxA family transcriptional regulator;protein_id=WP_043225326.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2128115 2129260 . - . ID=gene-NIV78_RS26125;Name=NIV78_RS26125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26125 NZ_CP100137.1 Protein Homology CDS 2128115 2129260 . - 0 ID=cds-WP_017922858.1;Parent=gene-NIV78_RS26125;Dbxref=Genbank:WP_017922858.1;Name=WP_017922858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898544.1;locus_tag=NIV78_RS26125;product=porin;protein_id=WP_017922858.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 2129556 2130110 . + . ID=gene-NIV78_RS26130;Name=NIV78_RS26130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS26130;partial=true;pseudo=true;start_range=.,2129556 NZ_CP100137.1 Protein Homology CDS 2129556 2130110 . + 0 ID=cds-NIV78_RS26130;Parent=gene-NIV78_RS26130;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732717.1;locus_tag=NIV78_RS26130;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,2129556;transl_table=11 NZ_CP100137.1 RefSeq gene 2130425 2131303 . + . ID=gene-NIV78_RS26135;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=NIV78_RS26135 NZ_CP100137.1 Protein Homology CDS 2130425 2131303 . + 0 ID=cds-WP_017922859.1;Parent=gene-NIV78_RS26135;Dbxref=Genbank:WP_017922859.1;Name=WP_017922859.1;Ontology_term=GO:0009152,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733431.1;locus_tag=NIV78_RS26135;product=formyltetrahydrofolate deformylase;protein_id=WP_017922859.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2131446 2131715 . - . ID=gene-NIV78_RS26140;Name=NIV78_RS26140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26140 NZ_CP100137.1 GeneMarkS-2+ CDS 2131446 2131715 . - 0 ID=cds-WP_017922860.1;Parent=gene-NIV78_RS26140;Dbxref=Genbank:WP_017922860.1;Name=WP_017922860.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS26140;product=hypothetical protein;protein_id=WP_017922860.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2131804 2133456 . - . ID=gene-NIV78_RS26145;Name=NIV78_RS26145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26145 NZ_CP100137.1 Protein Homology CDS 2131804 2133456 . - 0 ID=cds-WP_017922861.1;Parent=gene-NIV78_RS26145;Dbxref=Genbank:WP_017922861.1;Name=WP_017922861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733430.1;locus_tag=NIV78_RS26145;product=APC family permease;protein_id=WP_017922861.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2133627 2134490 . - . ID=gene-NIV78_RS26150;Name=NIV78_RS26150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26150 NZ_CP100137.1 Protein Homology CDS 2133627 2134490 . - 0 ID=cds-WP_012733429.1;Parent=gene-NIV78_RS26150;Dbxref=Genbank:WP_012733429.1;Name=WP_012733429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723970.1;locus_tag=NIV78_RS26150;product=glycine betaine ABC transporter substrate-binding protein;protein_id=WP_012733429.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2134644 2135789 . - . ID=gene-NIV78_RS26155;Name=NIV78_RS26155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26155 NZ_CP100137.1 Protein Homology CDS 2134644 2135789 . - 0 ID=cds-WP_012733428.1;Parent=gene-NIV78_RS26155;Dbxref=Genbank:WP_012733428.1;Name=WP_012733428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749542.1;locus_tag=NIV78_RS26155;product=hybrid-cluster NAD(P)-dependent oxidoreductase;protein_id=WP_012733428.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2135808 2137049 . - . ID=gene-NIV78_RS26160;Name=NIV78_RS26160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26160 NZ_CP100137.1 Protein Homology CDS 2135808 2137049 . - 0 ID=cds-WP_012733427.1;Parent=gene-NIV78_RS26160;Dbxref=Genbank:WP_012733427.1;Name=WP_012733427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089906.1;locus_tag=NIV78_RS26160;product=aromatic ring-hydroxylating dioxygenase subunit alpha;protein_id=WP_012733427.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2137102 2137887 . - . ID=gene-NIV78_RS26165;Name=NIV78_RS26165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26165 NZ_CP100137.1 Protein Homology CDS 2137102 2137887 . - 0 ID=cds-WP_012733426.1;Parent=gene-NIV78_RS26165;Dbxref=Genbank:WP_012733426.1;Name=WP_012733426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009898046.1;locus_tag=NIV78_RS26165;product=drug:proton antiporter;protein_id=WP_012733426.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2137884 2139059 . - . ID=gene-NIV78_RS26170;Name=NIV78_RS26170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26170 NZ_CP100137.1 Protein Homology CDS 2137884 2139059 . - 0 ID=cds-WP_100556189.1;Parent=gene-NIV78_RS26170;Dbxref=Genbank:WP_100556189.1;Name=WP_100556189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733425.1;locus_tag=NIV78_RS26170;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_100556189.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2139064 2140989 . - . ID=gene-NIV78_RS26175;Name=NIV78_RS26175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26175 NZ_CP100137.1 Protein Homology CDS 2139064 2140989 . - 0 ID=cds-WP_012733424.1;Parent=gene-NIV78_RS26175;Dbxref=Genbank:WP_012733424.1;Name=WP_012733424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018315306.1;locus_tag=NIV78_RS26175;product=(Fe-S)-binding protein;protein_id=WP_012733424.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2140992 2143055 . - . ID=gene-NIV78_RS26180;Name=NIV78_RS26180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26180 NZ_CP100137.1 Protein Homology CDS 2140992 2143055 . - 0 ID=cds-WP_017923506.1;Parent=gene-NIV78_RS26180;Dbxref=Genbank:WP_017923506.1;Name=WP_017923506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186960.1;locus_tag=NIV78_RS26180;product=NADH:flavin oxidoreductase;protein_id=WP_017923506.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2143104 2143646 . - . ID=gene-NIV78_RS26185;Name=NIV78_RS26185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26185 NZ_CP100137.1 Protein Homology CDS 2143104 2143646 . - 0 ID=cds-WP_012733422.1;Parent=gene-NIV78_RS26185;Dbxref=Genbank:WP_012733422.1;Name=WP_012733422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733422.1;locus_tag=NIV78_RS26185;product=4-vinyl reductase;protein_id=WP_012733422.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2143777 2144748 . - . ID=gene-NIV78_RS26190;Name=NIV78_RS26190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26190 NZ_CP100137.1 Protein Homology CDS 2143777 2144748 . - 0 ID=cds-WP_012733421.1;Parent=gene-NIV78_RS26190;Dbxref=Genbank:WP_012733421.1;Name=WP_012733421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017773741.1;locus_tag=NIV78_RS26190;product=dipeptidase;protein_id=WP_012733421.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2145275 2146300 . + . ID=gene-NIV78_RS26195;Name=NIV78_RS26195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26195 NZ_CP100137.1 Protein Homology CDS 2145275 2146300 . + 0 ID=cds-WP_012733420.1;Parent=gene-NIV78_RS26195;Dbxref=Genbank:WP_012733420.1;Name=WP_012733420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009898058.1;locus_tag=NIV78_RS26195;product=GlxA family transcriptional regulator;protein_id=WP_012733420.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2146355 2147632 . + . ID=gene-NIV78_RS26200;Name=NIV78_RS26200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26200 NZ_CP100137.1 Protein Homology CDS 2146355 2147632 . + 0 ID=cds-WP_251107615.1;Parent=gene-NIV78_RS26200;Dbxref=Genbank:WP_251107615.1;Name=WP_251107615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733419.1;locus_tag=NIV78_RS26200;product=hypothetical protein;protein_id=WP_251107615.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2147768 2148964 . - . ID=gene-NIV78_RS26205;Name=fdhA;gbkey=Gene;gene=fdhA;gene_biotype=protein_coding;locus_tag=NIV78_RS26205 NZ_CP100137.1 Protein Homology CDS 2147768 2148964 . - 0 ID=cds-WP_012733418.1;Parent=gene-NIV78_RS26205;Dbxref=Genbank:WP_012733418.1;Name=WP_012733418.1;Ontology_term=GO:0046292,GO:0018467;gbkey=CDS;gene=fdhA;go_function=formaldehyde dehydrogenase activity|0018467||IEA;go_process=formaldehyde metabolic process|0046292||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396349.1;locus_tag=NIV78_RS26205;product=formaldehyde dehydrogenase%2C glutathione-independent;protein_id=WP_012733418.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2149335 2150624 . - . ID=gene-NIV78_RS26210;Name=NIV78_RS26210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26210 NZ_CP100137.1 Protein Homology CDS 2149335 2150624 . - 0 ID=cds-WP_251107616.1;Parent=gene-NIV78_RS26210;Dbxref=Genbank:WP_251107616.1;Name=WP_251107616.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.2;locus_tag=NIV78_RS26210;product=MFS transporter;protein_id=WP_251107616.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2150632 2151819 . - . ID=gene-NIV78_RS26215;Name=NIV78_RS26215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26215 NZ_CP100137.1 Protein Homology CDS 2150632 2151819 . - 0 ID=cds-WP_043225760.1;Parent=gene-NIV78_RS26215;Dbxref=Genbank:WP_043225760.1;Name=WP_043225760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733415.1;locus_tag=NIV78_RS26215;product=ATP-grasp domain-containing protein;protein_id=WP_043225760.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2151917 2152804 . - . ID=gene-NIV78_RS26220;Name=NIV78_RS26220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26220 NZ_CP100137.1 Protein Homology CDS 2151917 2152804 . - 0 ID=cds-WP_124837134.1;Parent=gene-NIV78_RS26220;Dbxref=Genbank:WP_124837134.1;Name=WP_124837134.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733414.1;locus_tag=NIV78_RS26220;product=PhzF family phenazine biosynthesis protein;protein_id=WP_124837134.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2152835 2153542 . - . ID=gene-NIV78_RS26225;Name=NIV78_RS26225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26225 NZ_CP100137.1 Protein Homology CDS 2152835 2153542 . - 0 ID=cds-WP_017923226.1;Parent=gene-NIV78_RS26225;Dbxref=Genbank:WP_017923226.1;Name=WP_017923226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733413.1;locus_tag=NIV78_RS26225;product=PIG-L family deacetylase;protein_id=WP_017923226.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2153535 2154413 . - . ID=gene-NIV78_RS26230;Name=NIV78_RS26230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26230 NZ_CP100137.1 Protein Homology CDS 2153535 2154413 . - 0 ID=cds-WP_012733412.1;Parent=gene-NIV78_RS26230;Dbxref=Genbank:WP_012733412.1;Name=WP_012733412.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733412.1;locus_tag=NIV78_RS26230;product=aminotransferase class IV;protein_id=WP_012733412.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2154435 2155199 . - . ID=gene-NIV78_RS26235;Name=NIV78_RS26235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26235 NZ_CP100137.1 Protein Homology CDS 2154435 2155199 . - 0 ID=cds-WP_012733411.1;Parent=gene-NIV78_RS26235;Dbxref=Genbank:WP_012733411.1;Name=WP_012733411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733411.1;locus_tag=NIV78_RS26235;product=iron-containing redox enzyme family protein;protein_id=WP_012733411.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2155213 2156130 . - . ID=gene-NIV78_RS26240;Name=NIV78_RS26240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26240 NZ_CP100137.1 Protein Homology CDS 2155213 2156130 . - 0 ID=cds-WP_012733410.1;Parent=gene-NIV78_RS26240;Dbxref=Genbank:WP_012733410.1;Name=WP_012733410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423746.1;locus_tag=NIV78_RS26240;product=pyruvate carboxyltransferase;protein_id=WP_012733410.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2156744 2157796 . - . ID=gene-NIV78_RS26245;Name=NIV78_RS26245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26245 NZ_CP100137.1 Protein Homology CDS 2156744 2157796 . - 0 ID=cds-WP_012733409.1;Parent=gene-NIV78_RS26245;Dbxref=Genbank:WP_012733409.1;Name=WP_012733409.1;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733409.1;locus_tag=NIV78_RS26245;product=glycosyl hydrolase family 18 protein;protein_id=WP_012733409.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2158345 2159535 . - . ID=gene-NIV78_RS26250;Name=NIV78_RS26250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26250 NZ_CP100137.1 Protein Homology CDS 2158345 2159535 . - 0 ID=cds-WP_124837136.1;Parent=gene-NIV78_RS26250;Dbxref=Genbank:WP_124837136.1;Name=WP_124837136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423747.1;locus_tag=NIV78_RS26250;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WP_124837136.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2159540 2161042 . - . ID=gene-NIV78_RS26255;Name=NIV78_RS26255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26255 NZ_CP100137.1 Protein Homology CDS 2159540 2161042 . - 0 ID=cds-WP_251107918.1;Parent=gene-NIV78_RS26255;Dbxref=Genbank:WP_251107918.1;Name=WP_251107918.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689527.1;locus_tag=NIV78_RS26255;product=efflux transporter outer membrane subunit;protein_id=WP_251107918.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2161093 2162034 . - . ID=gene-NIV78_RS26260;Name=NIV78_RS26260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26260 NZ_CP100137.1 Protein Homology CDS 2161093 2162034 . - 0 ID=cds-WP_012733406.1;Parent=gene-NIV78_RS26260;Dbxref=Genbank:WP_012733406.1;Name=WP_012733406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689526.1;locus_tag=NIV78_RS26260;product=glycosyltransferase family 2 protein;protein_id=WP_012733406.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2162129 2163697 . - . ID=gene-NIV78_RS26265;Name=NIV78_RS26265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26265 NZ_CP100137.1 Protein Homology CDS 2162129 2163697 . - 0 ID=cds-WP_035979719.1;Parent=gene-NIV78_RS26265;Dbxref=Genbank:WP_035979719.1;Name=WP_035979719.1;Ontology_term=GO:0006855,GO:0009410,GO:0005887;gbkey=CDS;go_component=integral component of plasma membrane|0005887||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA,response to xenobiotic stimulus|0009410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602751.1;locus_tag=NIV78_RS26265;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_035979719.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2163784 2165166 . - . ID=gene-NIV78_RS26270;Name=NIV78_RS26270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26270 NZ_CP100137.1 Protein Homology CDS 2163784 2165166 . - 0 ID=cds-WP_012733404.1;Parent=gene-NIV78_RS26270;Dbxref=Genbank:WP_012733404.1;Name=WP_012733404.1;Ontology_term=GO:0005975,GO:0030259,GO:0016758;gbkey=CDS;go_function=hexosyltransferase activity|0016758||IEA;go_process=carbohydrate metabolic process|0005975||IEA,lipid glycosylation|0030259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009975584.1;locus_tag=NIV78_RS26270;product=glycosyltransferase;protein_id=WP_012733404.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2165309 2166199 . - . ID=gene-NIV78_RS26275;Name=NIV78_RS26275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26275 NZ_CP100137.1 Protein Homology CDS 2165309 2166199 . - 0 ID=cds-WP_012733403.1;Parent=gene-NIV78_RS26275;Dbxref=Genbank:WP_012733403.1;Name=WP_012733403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009896560.1;locus_tag=NIV78_RS26275;product=alpha/beta hydrolase;protein_id=WP_012733403.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2167115 2167720 . + . ID=gene-NIV78_RS26280;Name=betI;gbkey=Gene;gene=betI;gene_biotype=protein_coding;locus_tag=NIV78_RS26280 NZ_CP100137.1 Protein Homology CDS 2167115 2167720 . + 0 ID=cds-WP_012733402.1;Parent=gene-NIV78_RS26280;Dbxref=Genbank:WP_012733402.1;Name=WP_012733402.1;Ontology_term=GO:0003677;gbkey=CDS;gene=betI;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733402.1;locus_tag=NIV78_RS26280;product=transcriptional regulator BetI;protein_id=WP_012733402.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2167738 2169207 . + . ID=gene-NIV78_RS26285;Name=betB;gbkey=Gene;gene=betB;gene_biotype=protein_coding;locus_tag=NIV78_RS26285 NZ_CP100137.1 Protein Homology CDS 2167738 2169207 . + 0 ID=cds-WP_017924078.1;Parent=gene-NIV78_RS26285;Dbxref=Genbank:WP_017924078.1;Name=WP_017924078.1;Ontology_term=GO:0019285,GO:0008802,GO:0046872;gbkey=CDS;gene=betB;go_function=betaine-aldehyde dehydrogenase activity|0008802||IEA,metal ion binding|0046872||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004533333.1;locus_tag=NIV78_RS26285;product=betaine-aldehyde dehydrogenase;protein_id=WP_017924078.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2169233 2170930 . + . ID=gene-NIV78_RS26290;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;locus_tag=NIV78_RS26290 NZ_CP100137.1 Protein Homology CDS 2169233 2170930 . + 0 ID=cds-WP_161521810.1;Parent=gene-NIV78_RS26290;Dbxref=Genbank:WP_161521810.1;Name=WP_161521810.1;Ontology_term=GO:0019285,GO:0008812;gbkey=CDS;gene=betA;go_function=choline dehydrogenase activity|0008812||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733400.1;locus_tag=NIV78_RS26290;product=choline dehydrogenase;protein_id=WP_161521810.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2171462 2171923 . + . ID=gene-NIV78_RS26295;Name=NIV78_RS26295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26295 NZ_CP100137.1 Protein Homology CDS 2171462 2171923 . + 0 ID=cds-WP_012733399.1;Parent=gene-NIV78_RS26295;Dbxref=Genbank:WP_012733399.1;Name=WP_012733399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733399.1;locus_tag=NIV78_RS26295;product=response regulator;protein_id=WP_012733399.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2172205 2173161 . + . ID=gene-NIV78_RS26300;Name=NIV78_RS26300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26300 NZ_CP100137.1 Protein Homology CDS 2172205 2173161 . + 0 ID=cds-WP_012733398.1;Parent=gene-NIV78_RS26300;Dbxref=Genbank:WP_012733398.1;Name=WP_012733398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733398.1;locus_tag=NIV78_RS26300;product=ABC transporter ATP-binding protein;protein_id=WP_012733398.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2173180 2173944 . + . ID=gene-NIV78_RS26305;Name=NIV78_RS26305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26305 NZ_CP100137.1 Protein Homology CDS 2173180 2173944 . + 0 ID=cds-WP_012733397.1;Parent=gene-NIV78_RS26305;Dbxref=Genbank:WP_012733397.1;Name=WP_012733397.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733397.1;locus_tag=NIV78_RS26305;product=ABC transporter permease;protein_id=WP_012733397.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2174109 2175545 . + . ID=gene-NIV78_RS26310;Name=NIV78_RS26310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26310 NZ_CP100137.1 Protein Homology CDS 2174109 2175545 . + 0 ID=cds-WP_169511438.1;Parent=gene-NIV78_RS26310;Dbxref=Genbank:WP_169511438.1;Name=WP_169511438.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733396.1;locus_tag=NIV78_RS26310;product=MFS transporter;protein_id=WP_169511438.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2175894 2176964 . + . ID=gene-NIV78_RS26315;Name=NIV78_RS26315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26315 NZ_CP100137.1 Protein Homology CDS 2175894 2176964 . + 0 ID=cds-WP_100556556.1;Parent=gene-NIV78_RS26315;Dbxref=Genbank:WP_100556556.1;Name=WP_100556556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689512.1;locus_tag=NIV78_RS26315;product=beta-propeller fold lactonase family protein;protein_id=WP_100556556.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2177456 2179366 . + . ID=gene-NIV78_RS26320;Name=NIV78_RS26320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26320 NZ_CP100137.1 Protein Homology CDS 2177456 2179366 . + 0 ID=cds-WP_017924025.1;Parent=gene-NIV78_RS26320;Dbxref=Genbank:WP_017924025.1;Name=WP_017924025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004538868.1;locus_tag=NIV78_RS26320;product=hypothetical protein;protein_id=WP_017924025.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2179510 2180484 . - . ID=gene-NIV78_RS26325;Name=NIV78_RS26325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26325 NZ_CP100137.1 Protein Homology CDS 2179510 2180484 . - 0 ID=cds-WP_012733393.1;Parent=gene-NIV78_RS26325;Dbxref=Genbank:WP_012733393.1;Name=WP_012733393.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733393.1;locus_tag=NIV78_RS26325;product=threo-3-hydroxy-L-aspartate ammonia-lyase;protein_id=WP_012733393.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2180732 2181703 . - . ID=gene-NIV78_RS26330;Name=NIV78_RS26330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26330 NZ_CP100137.1 Protein Homology CDS 2180732 2181703 . - 0 ID=cds-WP_251107619.1;Parent=gene-NIV78_RS26330;Dbxref=Genbank:WP_251107619.1;Name=WP_251107619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733392.1;locus_tag=NIV78_RS26330;product=ornithine cyclodeaminase family protein;protein_id=WP_251107619.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2181919 2182575 . - . ID=gene-NIV78_RS26335;Name=NIV78_RS26335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26335 NZ_CP100137.1 Protein Homology CDS 2181919 2182575 . - 0 ID=cds-WP_017924646.1;Parent=gene-NIV78_RS26335;Dbxref=Genbank:WP_017924646.1;Name=WP_017924646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733391.1;locus_tag=NIV78_RS26335;product=M24 family metallopeptidase;protein_id=WP_017924646.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2182753 2183373 . + . ID=gene-NIV78_RS26340;Name=NIV78_RS26340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26340 NZ_CP100137.1 GeneMarkS-2+ CDS 2182753 2183373 . + 0 ID=cds-WP_161521806.1;Parent=gene-NIV78_RS26340;Dbxref=Genbank:WP_161521806.1;Name=WP_161521806.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS26340;product=hypothetical protein;protein_id=WP_161521806.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2183707 2184108 . - . ID=gene-NIV78_RS26345;Name=NIV78_RS26345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26345 NZ_CP100137.1 Protein Homology CDS 2183707 2184108 . - 0 ID=cds-WP_230674363.1;Parent=gene-NIV78_RS26345;Dbxref=Genbank:WP_230674363.1;Name=WP_230674363.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006164286.1;locus_tag=NIV78_RS26345;product=LysR family transcriptional regulator;protein_id=WP_230674363.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2184202 2184711 . - . ID=gene-NIV78_RS26350;Name=NIV78_RS26350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26350 NZ_CP100137.1 Protein Homology CDS 2184202 2184711 . - 0 ID=cds-WP_100556560.1;Parent=gene-NIV78_RS26350;Dbxref=Genbank:WP_100556560.1;Name=WP_100556560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733388.1;locus_tag=NIV78_RS26350;product=molybdopterin-dependent oxidoreductase;protein_id=WP_100556560.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2184718 2185146 . - . ID=gene-NIV78_RS26355;Name=NIV78_RS26355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26355 NZ_CP100137.1 Protein Homology CDS 2184718 2185146 . - 0 ID=cds-WP_012733387.1;Parent=gene-NIV78_RS26355;Dbxref=Genbank:WP_012733387.1;Name=WP_012733387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733387.1;locus_tag=NIV78_RS26355;product=TOBE domain-containing protein;protein_id=WP_012733387.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2185301 2186176 . + . ID=gene-NIV78_RS26360;Name=NIV78_RS26360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26360 NZ_CP100137.1 Protein Homology CDS 2185301 2186176 . + 0 ID=cds-WP_012733386.1;Parent=gene-NIV78_RS26360;Dbxref=Genbank:WP_012733386.1;Name=WP_012733386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733386.1;locus_tag=NIV78_RS26360;product=extracellular solute-binding protein;protein_id=WP_012733386.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2186177 2188036 . + . ID=gene-NIV78_RS26365;Name=NIV78_RS26365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26365 NZ_CP100137.1 Protein Homology CDS 2186177 2188036 . + 0 ID=cds-WP_251107620.1;Parent=gene-NIV78_RS26365;Dbxref=Genbank:WP_251107620.1;Name=WP_251107620.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733385.1;locus_tag=NIV78_RS26365;product=ATP-binding cassette domain-containing protein;protein_id=WP_251107620.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2188497 2190455 . - . ID=gene-NIV78_RS26370;Name=NIV78_RS26370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26370 NZ_CP100137.1 Protein Homology CDS 2188497 2190455 . - 0 ID=cds-WP_230674364.1;Parent=gene-NIV78_RS26370;Dbxref=Genbank:WP_230674364.1;Name=WP_230674364.1;Ontology_term=GO:0005975,GO:0004560;gbkey=CDS;go_function=alpha-L-fucosidase activity|0004560||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424744.1;locus_tag=NIV78_RS26370;product=alpha-L-fucosidase;protein_id=WP_230674364.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2190448 2190717 . - . ID=gene-NIV78_RS26375;Name=NIV78_RS26375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26375 NZ_CP100137.1 GeneMarkS-2+ CDS 2190448 2190717 . - 0 ID=cds-WP_176358909.1;Parent=gene-NIV78_RS26375;Dbxref=Genbank:WP_176358909.1;Name=WP_176358909.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS26375;product=hypothetical protein;protein_id=WP_176358909.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2190793 2191200 . - . ID=gene-NIV78_RS26380;Name=NIV78_RS26380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26380 NZ_CP100137.1 GeneMarkS-2+ CDS 2190793 2191200 . - 0 ID=cds-WP_043225234.1;Parent=gene-NIV78_RS26380;Dbxref=Genbank:WP_043225234.1;Name=WP_043225234.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS26380;product=hypothetical protein;protein_id=WP_043225234.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2191767 2192108 . - . ID=gene-NIV78_RS26385;Name=NIV78_RS26385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26385 NZ_CP100137.1 Protein Homology CDS 2191767 2192108 . - 0 ID=cds-WP_012733383.1;Parent=gene-NIV78_RS26385;Dbxref=Genbank:WP_012733383.1;Name=WP_012733383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733383.1;locus_tag=NIV78_RS26385;product=HdeA family protein;protein_id=WP_012733383.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2192503 2193513 . + . ID=gene-NIV78_RS26390;Name=NIV78_RS26390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26390 NZ_CP100137.1 Protein Homology CDS 2192503 2193513 . + 0 ID=cds-WP_017922785.1;Parent=gene-NIV78_RS26390;Dbxref=Genbank:WP_017922785.1;Name=WP_017922785.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733382.1;locus_tag=NIV78_RS26390;product=dienelactone hydrolase family protein;protein_id=WP_017922785.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2194032 2194256 . - . ID=gene-NIV78_RS26395;Name=NIV78_RS26395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26395 NZ_CP100137.1 Protein Homology CDS 2194032 2194256 . - 0 ID=cds-WP_012733381.1;Parent=gene-NIV78_RS26395;Dbxref=Genbank:WP_012733381.1;Name=WP_012733381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733381.1;locus_tag=NIV78_RS26395;product=DUF2934 domain-containing protein;protein_id=WP_012733381.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2194975 2195490 . + . ID=gene-NIV78_RS26400;Name=NIV78_RS26400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26400 NZ_CP100137.1 Protein Homology CDS 2194975 2195490 . + 0 ID=cds-WP_017922786.1;Parent=gene-NIV78_RS26400;Dbxref=Genbank:WP_017922786.1;Name=WP_017922786.1;Ontology_term=GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424741.1;locus_tag=NIV78_RS26400;product=nicotinamide-nucleotide amidohydrolase family protein;protein_id=WP_017922786.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2195769 2196575 . - . ID=gene-NIV78_RS26405;Name=NIV78_RS26405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26405 NZ_CP100137.1 Protein Homology CDS 2195769 2196575 . - 0 ID=cds-WP_232252186.1;Parent=gene-NIV78_RS26405;Dbxref=Genbank:WP_232252186.1;Name=WP_232252186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733379.1;locus_tag=NIV78_RS26405;product=helix-turn-helix domain-containing protein;protein_id=WP_232252186.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2196649 2198199 . + . ID=gene-NIV78_RS26410;Name=NIV78_RS26410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26410 NZ_CP100137.1 Protein Homology CDS 2196649 2198199 . + 0 ID=cds-WP_230674367.1;Parent=gene-NIV78_RS26410;Dbxref=Genbank:WP_230674367.1;Name=WP_230674367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733378.1;locus_tag=NIV78_RS26410;product=glycoside-pentoside-hexuronide (GPH):cation symporter;protein_id=WP_230674367.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2198263 2200230 . + . ID=gene-NIV78_RS26415;Name=NIV78_RS26415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26415 NZ_CP100137.1 Protein Homology CDS 2198263 2200230 . + 0 ID=cds-WP_017424740.1;Parent=gene-NIV78_RS26415;Dbxref=Genbank:WP_017424740.1;Name=WP_017424740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424740.1;locus_tag=NIV78_RS26415;product=glycoside hydrolase family 127 protein;protein_id=WP_017424740.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2201452 2203023 . + . ID=gene-NIV78_RS26420;Name=NIV78_RS26420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26420 NZ_CP100137.1 Protein Homology CDS 2201452 2203023 . + 0 ID=cds-WP_257757541.1;Parent=gene-NIV78_RS26420;Dbxref=Genbank:WP_257757541.1;Name=WP_257757541.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014972859.1;locus_tag=NIV78_RS26420;product=methyl-accepting chemotaxis protein;protein_id=WP_257757541.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2203368 2203721 . - . ID=gene-NIV78_RS26425;Name=NIV78_RS26425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26425 NZ_CP100137.1 Protein Homology CDS 2203368 2203721 . - 0 ID=cds-WP_017424604.1;Parent=gene-NIV78_RS26425;Dbxref=Genbank:WP_017424604.1;Name=WP_017424604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733375.1;locus_tag=NIV78_RS26425;product=STN domain-containing protein;protein_id=WP_017424604.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2204203 2205186 . - . ID=gene-NIV78_RS26430;Name=NIV78_RS26430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26430 NZ_CP100137.1 GeneMarkS-2+ CDS 2204203 2205186 . - 0 ID=cds-WP_230674397.1;Parent=gene-NIV78_RS26430;Dbxref=Genbank:WP_230674397.1;Name=WP_230674397.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS26430;product=hypothetical protein;protein_id=WP_230674397.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2205856 2206071 . - . ID=gene-NIV78_RS26435;Name=NIV78_RS26435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26435 NZ_CP100137.1 GeneMarkS-2+ CDS 2205856 2206071 . - 0 ID=cds-WP_127913868.1;Parent=gene-NIV78_RS26435;Dbxref=Genbank:WP_127913868.1;Name=WP_127913868.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS26435;product=hypothetical protein;protein_id=WP_127913868.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2206992 2208089 . + . ID=gene-NIV78_RS26440;Name=NIV78_RS26440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26440 NZ_CP100137.1 Protein Homology CDS 2206992 2208089 . + 0 ID=cds-WP_251107623.1;Parent=gene-NIV78_RS26440;Dbxref=Genbank:WP_251107623.1;Name=WP_251107623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733373.1;locus_tag=NIV78_RS26440;product=PHB depolymerase family esterase;protein_id=WP_251107623.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2208321 2209334 . + . ID=gene-NIV78_RS26445;Name=NIV78_RS26445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26445 NZ_CP100137.1 Protein Homology CDS 2208321 2209334 . + 0 ID=cds-WP_012733372.1;Parent=gene-NIV78_RS26445;Dbxref=Genbank:WP_012733372.1;Name=WP_012733372.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733372.1;locus_tag=NIV78_RS26445;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_012733372.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2209500 2210504 . + . ID=gene-NIV78_RS26450;Name=NIV78_RS26450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26450 NZ_CP100137.1 Protein Homology CDS 2209500 2210504 . + 0 ID=cds-WP_017923923.1;Parent=gene-NIV78_RS26450;Dbxref=Genbank:WP_017923923.1;Name=WP_017923923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733371.1;locus_tag=NIV78_RS26450;product=trypsin-like peptidase domain-containing protein;protein_id=WP_017923923.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 2210833 2210979 . + . ID=gene-NIV78_RS26455;Name=NIV78_RS26455;end_range=2210979,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS26455;partial=true;pseudo=true NZ_CP100137.1 Protein Homology CDS 2210833 2210979 . + 0 ID=cds-NIV78_RS26455;Parent=gene-NIV78_RS26455;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2210979,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498723.1;locus_tag=NIV78_RS26455;partial=true;product=DinB family protein;pseudo=true;transl_table=11 NZ_CP100137.1 RefSeq gene 2211255 2212004 . + . ID=gene-NIV78_RS26460;Name=NIV78_RS26460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26460 NZ_CP100137.1 Protein Homology CDS 2211255 2212004 . + 0 ID=cds-WP_012733369.1;Parent=gene-NIV78_RS26460;Dbxref=Genbank:WP_012733369.1;Name=WP_012733369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733369.1;locus_tag=NIV78_RS26460;product=alpha/beta fold hydrolase;protein_id=WP_012733369.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2212253 2213890 . - . ID=gene-NIV78_RS26465;Name=NIV78_RS26465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26465 NZ_CP100137.1 Protein Homology CDS 2212253 2213890 . - 0 ID=cds-WP_017923935.1;Parent=gene-NIV78_RS26465;Dbxref=Genbank:WP_017923935.1;Name=WP_017923935.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733368.1;locus_tag=NIV78_RS26465;product=methyl-accepting chemotaxis protein;protein_id=WP_017923935.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2214005 2214226 . + . ID=gene-NIV78_RS26470;Name=NIV78_RS26470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26470 NZ_CP100137.1 GeneMarkS-2+ CDS 2214005 2214226 . + 0 ID=cds-WP_124837411.1;Parent=gene-NIV78_RS26470;Dbxref=Genbank:WP_124837411.1;Name=WP_124837411.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS26470;product=hypothetical protein;protein_id=WP_124837411.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2214223 2214378 . - . ID=gene-NIV78_RS26475;Name=NIV78_RS26475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26475 NZ_CP100137.1 GeneMarkS-2+ CDS 2214223 2214378 . - 0 ID=cds-WP_257757543.1;Parent=gene-NIV78_RS26475;Dbxref=Genbank:WP_257757543.1;Name=WP_257757543.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS26475;product=hypothetical protein;protein_id=WP_257757543.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2214637 2214927 . + . ID=gene-NIV78_RS26480;Name=NIV78_RS26480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26480 NZ_CP100137.1 GeneMarkS-2+ CDS 2214637 2214927 . + 0 ID=cds-WP_257757545.1;Parent=gene-NIV78_RS26480;Dbxref=Genbank:WP_257757545.1;Name=WP_257757545.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS26480;product=hypothetical protein;protein_id=WP_257757545.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2214924 2215280 . + . ID=gene-NIV78_RS26485;Name=NIV78_RS26485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26485 NZ_CP100137.1 GeneMarkS-2+ CDS 2214924 2215280 . + 0 ID=cds-WP_017433039.1;Parent=gene-NIV78_RS26485;Dbxref=Genbank:WP_017433039.1;Name=WP_017433039.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS26485;product=hypothetical protein;protein_id=WP_017433039.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2215588 2218458 . + . ID=gene-NIV78_RS26490;Name=NIV78_RS26490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26490 NZ_CP100137.1 Protein Homology CDS 2215588 2218458 . + 0 ID=cds-WP_251107625.1;Parent=gene-NIV78_RS26490;Dbxref=Genbank:WP_251107625.1;Name=WP_251107625.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012698.2;locus_tag=NIV78_RS26490;product=winged helix-turn-helix domain-containing protein;protein_id=WP_251107625.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2218503 2218838 . - . ID=gene-NIV78_RS26495;Name=NIV78_RS26495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26495 NZ_CP100137.1 Protein Homology CDS 2218503 2218838 . - 0 ID=cds-WP_012733366.1;Parent=gene-NIV78_RS26495;Dbxref=Genbank:WP_012733366.1;Name=WP_012733366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733366.1;locus_tag=NIV78_RS26495;product=hypothetical protein;protein_id=WP_012733366.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2218863 2220290 . - . ID=gene-NIV78_RS26500;Name=NIV78_RS26500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26500 NZ_CP100137.1 Protein Homology CDS 2218863 2220290 . - 0 ID=cds-WP_043227212.1;Parent=gene-NIV78_RS26500;Dbxref=Genbank:WP_043227212.1;Name=WP_043227212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733365.1;locus_tag=NIV78_RS26500;product=alginate export family protein;protein_id=WP_043227212.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2220319 2221269 . - . ID=gene-NIV78_RS26505;Name=NIV78_RS26505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26505 NZ_CP100137.1 Protein Homology CDS 2220319 2221269 . - 0 ID=cds-WP_017423089.1;Parent=gene-NIV78_RS26505;Dbxref=Genbank:WP_017423089.1;Name=WP_017423089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423089.1;locus_tag=NIV78_RS26505;product=glyoxalase/bleomycin resistance/dioxygenase family protein;protein_id=WP_017423089.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2221361 2222119 . - . ID=gene-NIV78_RS26510;Name=NIV78_RS26510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26510 NZ_CP100137.1 Protein Homology CDS 2221361 2222119 . - 0 ID=cds-WP_100556333.1;Parent=gene-NIV78_RS26510;Dbxref=Genbank:WP_100556333.1;Name=WP_100556333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880452.1;locus_tag=NIV78_RS26510;product=DUF1275 family protein;protein_id=WP_100556333.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2222116 2222388 . - . ID=gene-NIV78_RS26515;Name=NIV78_RS26515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26515 NZ_CP100137.1 Protein Homology CDS 2222116 2222388 . - 0 ID=cds-WP_012733362.1;Parent=gene-NIV78_RS26515;Dbxref=Genbank:WP_012733362.1;Name=WP_012733362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006049057.1;locus_tag=NIV78_RS26515;product=DUF1427 family protein;protein_id=WP_012733362.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2222503 2223165 . - . ID=gene-NIV78_RS26520;Name=NIV78_RS26520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26520 NZ_CP100137.1 Protein Homology CDS 2222503 2223165 . - 0 ID=cds-WP_012733361.1;Parent=gene-NIV78_RS26520;Dbxref=Genbank:WP_012733361.1;Name=WP_012733361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733361.1;locus_tag=NIV78_RS26520;product=phosphohydrolase;protein_id=WP_012733361.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2223240 2223647 . - . ID=gene-NIV78_RS26525;Name=NIV78_RS26525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26525 NZ_CP100137.1 Protein Homology CDS 2223240 2223647 . - 0 ID=cds-WP_251107919.1;Parent=gene-NIV78_RS26525;Dbxref=Genbank:WP_251107919.1;Name=WP_251107919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733360.1;locus_tag=NIV78_RS26525;product=DoxX family membrane protein;protein_id=WP_251107919.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2223708 2225585 . - . ID=gene-NIV78_RS26530;Name=NIV78_RS26530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26530 NZ_CP100137.1 Protein Homology CDS 2223708 2225585 . - 0 ID=cds-WP_257757550.1;Parent=gene-NIV78_RS26530;Dbxref=Genbank:WP_257757550.1;Name=WP_257757550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012404951.1;locus_tag=NIV78_RS26530;product=amidohydrolase;protein_id=WP_257757550.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2225724 2226359 . - . ID=gene-NIV78_RS26535;Name=NIV78_RS26535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26535 NZ_CP100137.1 Protein Homology CDS 2225724 2226359 . - 0 ID=cds-WP_012733358.1;Parent=gene-NIV78_RS26535;Dbxref=Genbank:WP_012733358.1;Name=WP_012733358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733358.1;locus_tag=NIV78_RS26535;product=hydrolase;protein_id=WP_012733358.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2226623 2227615 . - . ID=gene-NIV78_RS26540;Name=NIV78_RS26540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26540 NZ_CP100137.1 Protein Homology CDS 2226623 2227615 . - 0 ID=cds-WP_100556332.1;Parent=gene-NIV78_RS26540;Dbxref=Genbank:WP_100556332.1;Name=WP_100556332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733357.1;locus_tag=NIV78_RS26540;product=alpha/beta hydrolase;protein_id=WP_100556332.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2228066 2231005 . - . ID=gene-NIV78_RS26545;Name=NIV78_RS26545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26545 NZ_CP100137.1 Protein Homology CDS 2228066 2231005 . - 0 ID=cds-WP_124837407.1;Parent=gene-NIV78_RS26545;Dbxref=Genbank:WP_124837407.1;Name=WP_124837407.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733356.1;locus_tag=NIV78_RS26545;product=winged helix-turn-helix domain-containing protein;protein_id=WP_124837407.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2231620 2232537 . + . ID=gene-NIV78_RS26550;Name=NIV78_RS26550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26550 NZ_CP100137.1 Protein Homology CDS 2231620 2232537 . + 0 ID=cds-WP_012733355.1;Parent=gene-NIV78_RS26550;Dbxref=Genbank:WP_012733355.1;Name=WP_012733355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733355.1;locus_tag=NIV78_RS26550;product=AraC family transcriptional regulator;protein_id=WP_012733355.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2232691 2232987 . - . ID=gene-NIV78_RS26555;Name=NIV78_RS26555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26555 NZ_CP100137.1 Protein Homology CDS 2232691 2232987 . - 0 ID=cds-WP_012733354.1;Parent=gene-NIV78_RS26555;Dbxref=Genbank:WP_012733354.1;Name=WP_012733354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733354.1;locus_tag=NIV78_RS26555;product=hypothetical protein;protein_id=WP_012733354.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2233132 2234517 . - . ID=gene-NIV78_RS26560;Name=NIV78_RS26560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26560 NZ_CP100137.1 Protein Homology CDS 2233132 2234517 . - 0 ID=cds-WP_251107628.1;Parent=gene-NIV78_RS26560;Dbxref=Genbank:WP_251107628.1;Name=WP_251107628.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733353.1;locus_tag=NIV78_RS26560;product=DEAD/DEAH box helicase;protein_id=WP_251107628.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2234613 2235302 . - . ID=gene-NIV78_RS26565;Name=NIV78_RS26565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26565 NZ_CP100137.1 Protein Homology CDS 2234613 2235302 . - 0 ID=cds-WP_017923528.1;Parent=gene-NIV78_RS26565;Dbxref=Genbank:WP_017923528.1;Name=WP_017923528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397181.1;locus_tag=NIV78_RS26565;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_017923528.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2235532 2235960 . - . ID=gene-NIV78_RS26570;Name=NIV78_RS26570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26570 NZ_CP100137.1 GeneMarkS-2+ CDS 2235532 2235960 . - 0 ID=cds-WP_251107629.1;Parent=gene-NIV78_RS26570;Dbxref=Genbank:WP_251107629.1;Name=WP_251107629.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS26570;product=hypothetical protein;protein_id=WP_251107629.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2236325 2237518 . + . ID=gene-NIV78_RS26575;Name=NIV78_RS26575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26575 NZ_CP100137.1 Protein Homology CDS 2236325 2237518 . + 0 ID=cds-WP_017923529.1;Parent=gene-NIV78_RS26575;Dbxref=Genbank:WP_017923529.1;Name=WP_017923529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733351.1;locus_tag=NIV78_RS26575;product=porin;protein_id=WP_017923529.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2237574 2238827 . - . ID=gene-NIV78_RS26580;Name=NIV78_RS26580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26580 NZ_CP100137.1 Protein Homology CDS 2237574 2238827 . - 0 ID=cds-WP_017923530.1;Parent=gene-NIV78_RS26580;Dbxref=Genbank:WP_017923530.1;Name=WP_017923530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733350.1;locus_tag=NIV78_RS26580;product=DUF1479 domain-containing protein;protein_id=WP_017923530.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2238924 2239883 . + . ID=gene-NIV78_RS26585;Name=NIV78_RS26585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26585 NZ_CP100137.1 Protein Homology CDS 2238924 2239883 . + 0 ID=cds-WP_153478561.1;Parent=gene-NIV78_RS26585;Dbxref=Genbank:WP_153478561.1;Name=WP_153478561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733349.1;locus_tag=NIV78_RS26585;product=AraC family transcriptional regulator;protein_id=WP_153478561.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2239948 2240355 . - . ID=gene-NIV78_RS26590;Name=NIV78_RS26590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26590 NZ_CP100137.1 GeneMarkS-2+ CDS 2239948 2240355 . - 0 ID=cds-WP_251107630.1;Parent=gene-NIV78_RS26590;Dbxref=Genbank:WP_251107630.1;Name=WP_251107630.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS26590;product=hypothetical protein;protein_id=WP_251107630.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2240342 2240917 . + . ID=gene-NIV78_RS26595;Name=NIV78_RS26595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26595 NZ_CP100137.1 Protein Homology CDS 2240342 2240917 . + 0 ID=cds-WP_017924837.1;Parent=gene-NIV78_RS26595;Dbxref=Genbank:WP_017924837.1;Name=WP_017924837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733348.1;locus_tag=NIV78_RS26595;product=bacterioferritin;protein_id=WP_017924837.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2241073 2241243 . + . ID=gene-NIV78_RS26600;Name=NIV78_RS26600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26600 NZ_CP100137.1 Protein Homology CDS 2241073 2241243 . + 0 ID=cds-WP_012733347.1;Parent=gene-NIV78_RS26600;Dbxref=Genbank:WP_012733347.1;Name=WP_012733347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733347.1;locus_tag=NIV78_RS26600;product=CsbD family protein;protein_id=WP_012733347.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2241354 2241572 . + . ID=gene-NIV78_RS26605;Name=NIV78_RS26605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26605 NZ_CP100137.1 Protein Homology CDS 2241354 2241572 . + 0 ID=cds-WP_035981938.1;Parent=gene-NIV78_RS26605;Dbxref=Genbank:WP_035981938.1;Name=WP_035981938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755501.1;locus_tag=NIV78_RS26605;product=hypothetical protein;protein_id=WP_035981938.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2241627 2242121 . - . ID=gene-NIV78_RS26610;Name=NIV78_RS26610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26610 NZ_CP100137.1 Protein Homology CDS 2241627 2242121 . - 0 ID=cds-WP_017924236.1;Parent=gene-NIV78_RS26610;Dbxref=Genbank:WP_017924236.1;Name=WP_017924236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733346.1;locus_tag=NIV78_RS26610;product=dihydroneopterin aldolase;protein_id=WP_017924236.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2242118 2242753 . - . ID=gene-NIV78_RS26615;Name=NIV78_RS26615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26615 NZ_CP100137.1 Protein Homology CDS 2242118 2242753 . - 0 ID=cds-WP_012733345.1;Parent=gene-NIV78_RS26615;Dbxref=Genbank:WP_012733345.1;Name=WP_012733345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496827.1;locus_tag=NIV78_RS26615;product=sarcosine oxidase subunit gamma;protein_id=WP_012733345.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2242743 2245754 . - . ID=gene-NIV78_RS26620;Name=NIV78_RS26620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26620 NZ_CP100137.1 Protein Homology CDS 2242743 2245754 . - 0 ID=cds-WP_012733344.1;Parent=gene-NIV78_RS26620;Dbxref=Genbank:WP_012733344.1;Name=WP_012733344.1;Ontology_term=GO:0008115;gbkey=CDS;go_function=sarcosine oxidase activity|0008115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354097.1;locus_tag=NIV78_RS26620;product=sarcosine oxidase subunit alpha family protein;protein_id=WP_012733344.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2245751 2246053 . - . ID=gene-NIV78_RS26625;Name=NIV78_RS26625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26625 NZ_CP100137.1 Protein Homology CDS 2245751 2246053 . - 0 ID=cds-WP_012733343.1;Parent=gene-NIV78_RS26625;Dbxref=Genbank:WP_012733343.1;Name=WP_012733343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006052193.1;locus_tag=NIV78_RS26625;product=sarcosine oxidase subunit delta;protein_id=WP_012733343.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2246077 2247321 . - . ID=gene-NIV78_RS26630;Name=NIV78_RS26630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26630 NZ_CP100137.1 Protein Homology CDS 2246077 2247321 . - 0 ID=cds-WP_012733342.1;Parent=gene-NIV78_RS26630;Dbxref=Genbank:WP_012733342.1;Name=WP_012733342.1;Ontology_term=GO:0046653,GO:0008115;gbkey=CDS;go_function=sarcosine oxidase activity|0008115||IEA;go_process=tetrahydrofolate metabolic process|0046653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017773687.1;locus_tag=NIV78_RS26630;product=sarcosine oxidase subunit beta family protein;protein_id=WP_012733342.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2247338 2248723 . - . ID=gene-NIV78_RS26635;Name=NIV78_RS26635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26635 NZ_CP100137.1 Protein Homology CDS 2247338 2248723 . - 0 ID=cds-WP_043226244.1;Parent=gene-NIV78_RS26635;Dbxref=Genbank:WP_043226244.1;Name=WP_043226244.1;Ontology_term=GO:0009063,GO:0003941,GO:0051539;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=cellular amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009981714.1;locus_tag=NIV78_RS26635;product=L-serine ammonia-lyase;protein_id=WP_043226244.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2248979 2250106 . + . ID=gene-NIV78_RS26640;Name=NIV78_RS26640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26640 NZ_CP100137.1 Protein Homology CDS 2248979 2250106 . + 0 ID=cds-WP_161521789.1;Parent=gene-NIV78_RS26640;Dbxref=Genbank:WP_161521789.1;Name=WP_161521789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733340.1;locus_tag=NIV78_RS26640;product=GlxA family transcriptional regulator;protein_id=WP_161521789.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2250523 2251203 . - . ID=gene-NIV78_RS26645;Name=NIV78_RS26645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26645 NZ_CP100137.1 GeneMarkS-2+ CDS 2250523 2251203 . - 0 ID=cds-WP_251118932.1;Parent=gene-NIV78_RS26645;Dbxref=Genbank:WP_251118932.1;Name=WP_251118932.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS26645;product=hypothetical protein;protein_id=WP_251118932.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2251555 2253312 . - . ID=gene-NIV78_RS26650;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=NIV78_RS26650 NZ_CP100137.1 Protein Homology CDS 2251555 2253312 . - 0 ID=cds-WP_012733339.1;Parent=gene-NIV78_RS26650;Dbxref=Genbank:WP_012733339.1;Name=WP_012733339.1;Ontology_term=GO:0006750;gbkey=CDS;gene=ggt;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733339.1;locus_tag=NIV78_RS26650;product=gamma-glutamyltransferase;protein_id=WP_012733339.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2253519 2254427 . - . ID=gene-NIV78_RS26655;Name=NIV78_RS26655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26655 NZ_CP100137.1 Protein Homology CDS 2253519 2254427 . - 0 ID=cds-WP_017923878.1;Parent=gene-NIV78_RS26655;Dbxref=Genbank:WP_017923878.1;Name=WP_017923878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331387.1;locus_tag=NIV78_RS26655;product=LysR family transcriptional regulator;protein_id=WP_017923878.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2254575 2256860 . + . ID=gene-NIV78_RS26660;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=NIV78_RS26660 NZ_CP100137.1 Protein Homology CDS 2254575 2256860 . + 0 ID=cds-WP_012733337.1;Parent=gene-NIV78_RS26660;Dbxref=Genbank:WP_012733337.1;Name=WP_012733337.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=cellular amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353976.1;locus_tag=NIV78_RS26660;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_012733337.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2256926 2257450 . + . ID=gene-NIV78_RS26665;Name=NIV78_RS26665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26665 NZ_CP100137.1 Protein Homology CDS 2256926 2257450 . + 0 ID=cds-WP_012733336.1;Parent=gene-NIV78_RS26665;Dbxref=Genbank:WP_012733336.1;Name=WP_012733336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424548.1;locus_tag=NIV78_RS26665;product=GNAT family N-acetyltransferase;protein_id=WP_012733336.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2257667 2258371 . + . ID=gene-NIV78_RS26670;Name=NIV78_RS26670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26670 NZ_CP100137.1 Protein Homology CDS 2257667 2258371 . + 0 ID=cds-WP_017424549.1;Parent=gene-NIV78_RS26670;Dbxref=Genbank:WP_017424549.1;Name=WP_017424549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733335.1;locus_tag=NIV78_RS26670;product=FadR family transcriptional regulator;protein_id=WP_017424549.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2258419 2259309 . + . ID=gene-NIV78_RS26675;Name=NIV78_RS26675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26675 NZ_CP100137.1 Protein Homology CDS 2258419 2259309 . + 0 ID=cds-WP_017923826.1;Parent=gene-NIV78_RS26675;Dbxref=Genbank:WP_017923826.1;Name=WP_017923826.1;Ontology_term=GO:0051287;gbkey=CDS;go_function=NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603177.1;locus_tag=NIV78_RS26675;product=NAD-binding protein;protein_id=WP_017923826.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2259342 2260637 . + . ID=gene-NIV78_RS26680;Name=NIV78_RS26680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26680 NZ_CP100137.1 Protein Homology CDS 2259342 2260637 . + 0 ID=cds-WP_100556339.1;Parent=gene-NIV78_RS26680;Dbxref=Genbank:WP_100556339.1;Name=WP_100556339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366774.1;locus_tag=NIV78_RS26680;product=four-carbon acid sugar kinase family protein;protein_id=WP_100556339.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2260634 2261272 . + . ID=gene-NIV78_RS26685;Name=NIV78_RS26685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26685 NZ_CP100137.1 Protein Homology CDS 2260634 2261272 . + 0 ID=cds-WP_017424550.1;Parent=gene-NIV78_RS26685;Dbxref=Genbank:WP_017424550.1;Name=WP_017424550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004524356.1;locus_tag=NIV78_RS26685;product=aldolase;protein_id=WP_017424550.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2261366 2261722 . + . ID=gene-NIV78_RS26690;Name=NIV78_RS26690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26690 NZ_CP100137.1 Protein Homology CDS 2261366 2261722 . + 0 ID=cds-WP_012733331.1;Parent=gene-NIV78_RS26690;Dbxref=Genbank:WP_012733331.1;Name=WP_012733331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733331.1;locus_tag=NIV78_RS26690;product=hypothetical protein;protein_id=WP_012733331.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2261794 2262570 . + . ID=gene-NIV78_RS26695;Name=NIV78_RS26695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26695 NZ_CP100137.1 Protein Homology CDS 2261794 2262570 . + 0 ID=cds-WP_012733330.1;Parent=gene-NIV78_RS26695;Dbxref=Genbank:WP_012733330.1;Name=WP_012733330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733330.1;locus_tag=NIV78_RS26695;product=hydroxypyruvate isomerase family protein;protein_id=WP_012733330.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2262633 2263604 . + . ID=gene-NIV78_RS26700;Name=NIV78_RS26700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26700 NZ_CP100137.1 Protein Homology CDS 2262633 2263604 . + 0 ID=cds-WP_251107632.1;Parent=gene-NIV78_RS26700;Dbxref=Genbank:WP_251107632.1;Name=WP_251107632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733329.1;locus_tag=NIV78_RS26700;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_251107632.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2263694 2264716 . - . ID=gene-NIV78_RS26705;Name=NIV78_RS26705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26705 NZ_CP100137.1 Protein Homology CDS 2263694 2264716 . - 0 ID=cds-WP_012733328.1;Parent=gene-NIV78_RS26705;Dbxref=Genbank:WP_012733328.1;Name=WP_012733328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898941.1;locus_tag=NIV78_RS26705;product=2Fe-2S iron-sulfur cluster binding domain-containing protein;protein_id=WP_012733328.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2264730 2266397 . - . ID=gene-NIV78_RS26710;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=NIV78_RS26710 NZ_CP100137.1 Protein Homology CDS 2264730 2266397 . - 0 ID=cds-WP_012733327.1;Parent=gene-NIV78_RS26710;Dbxref=Genbank:WP_012733327.1;Name=WP_012733327.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659085.1;locus_tag=NIV78_RS26710;product=hydroxylamine reductase;protein_id=WP_012733327.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2266589 2266831 . - . ID=gene-NIV78_RS26715;Name=NIV78_RS26715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26715 NZ_CP100137.1 Protein Homology CDS 2266589 2266831 . - 0 ID=cds-WP_017922941.1;Parent=gene-NIV78_RS26715;Dbxref=Genbank:WP_017922941.1;Name=WP_017922941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733326.1;locus_tag=NIV78_RS26715;product=DUF3079 domain-containing protein;protein_id=WP_017922941.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2267050 2267739 . + . ID=gene-NIV78_RS26720;Name=NIV78_RS26720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26720 NZ_CP100137.1 Protein Homology CDS 2267050 2267739 . + 0 ID=cds-WP_017922942.1;Parent=gene-NIV78_RS26720;Dbxref=Genbank:WP_017922942.1;Name=WP_017922942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603926.1;locus_tag=NIV78_RS26720;product=aspartyl/asparaginyl beta-hydroxylase domain-containing protein;protein_id=WP_017922942.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2267775 2268725 . - . ID=gene-NIV78_RS26725;Name=NIV78_RS26725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26725 NZ_CP100137.1 Protein Homology CDS 2267775 2268725 . - 0 ID=cds-WP_017423811.1;Parent=gene-NIV78_RS26725;Dbxref=Genbank:WP_017423811.1;Name=WP_017423811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423811.1;locus_tag=NIV78_RS26725;product=choline ABC transporter substrate-binding protein;protein_id=WP_017423811.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2268852 2269856 . - . ID=gene-NIV78_RS26730;Name=NIV78_RS26730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26730 NZ_CP100137.1 Protein Homology CDS 2268852 2269856 . - 0 ID=cds-WP_012733323.1;Parent=gene-NIV78_RS26730;Dbxref=Genbank:WP_012733323.1;Name=WP_012733323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733323.1;locus_tag=NIV78_RS26730;product=GlxA family transcriptional regulator;protein_id=WP_012733323.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2269965 2270858 . - . ID=gene-NIV78_RS26735;Name=choW;gbkey=Gene;gene=choW;gene_biotype=protein_coding;locus_tag=NIV78_RS26735 NZ_CP100137.1 Protein Homology CDS 2269965 2270858 . - 0 ID=cds-WP_012733322.1;Parent=gene-NIV78_RS26735;Dbxref=Genbank:WP_012733322.1;Name=WP_012733322.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=choW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880824.1;locus_tag=NIV78_RS26735;product=choline ABC transporter permease subunit;protein_id=WP_012733322.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2270851 2272020 . - . ID=gene-NIV78_RS26740;Name=NIV78_RS26740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26740 NZ_CP100137.1 Protein Homology CDS 2270851 2272020 . - 0 ID=cds-WP_012733321.1;Parent=gene-NIV78_RS26740;Dbxref=Genbank:WP_012733321.1;Name=WP_012733321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004533427.1;locus_tag=NIV78_RS26740;product=glycine betaine/L-proline ABC transporter ATP-binding protein;protein_id=WP_012733321.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2272049 2272324 . - . ID=gene-NIV78_RS26745;Name=NIV78_RS26745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26745 NZ_CP100137.1 GeneMarkS-2+ CDS 2272049 2272324 . - 0 ID=cds-WP_232734585.1;Parent=gene-NIV78_RS26745;Dbxref=Genbank:WP_232734585.1;Name=WP_232734585.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS26745;product=hypothetical protein;protein_id=WP_232734585.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2272816 2273469 . + . ID=gene-NIV78_RS26750;Name=NIV78_RS26750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26750 NZ_CP100137.1 Protein Homology CDS 2272816 2273469 . + 0 ID=cds-WP_012733320.1;Parent=gene-NIV78_RS26750;Dbxref=Genbank:WP_012733320.1;Name=WP_012733320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733320.1;locus_tag=NIV78_RS26750;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_012733320.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2273799 2274014 . + . ID=gene-NIV78_RS26755;Name=NIV78_RS26755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26755 NZ_CP100137.1 Protein Homology CDS 2273799 2274014 . + 0 ID=cds-WP_012733319.1;Parent=gene-NIV78_RS26755;Dbxref=Genbank:WP_012733319.1;Name=WP_012733319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354057.1;locus_tag=NIV78_RS26755;product=hypothetical protein;protein_id=WP_012733319.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 2274193 2274561 . + . ID=gene-NIV78_RS26760;Name=NIV78_RS26760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS26760;partial=true;pseudo=true;start_range=.,2274193 NZ_CP100137.1 Protein Homology CDS 2274193 2274561 . + 0 ID=cds-NIV78_RS26760;Parent=gene-NIV78_RS26760;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755591.1;locus_tag=NIV78_RS26760;partial=true;product=ferritin-like domain-containing protein;pseudo=true;start_range=.,2274193;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 2275293 2276192 . + . ID=gene-NIV78_RS26765;Name=NIV78_RS26765;end_range=2276192,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS26765;partial=true;pseudo=true NZ_CP100137.1 Protein Homology CDS 2275293 2276192 . + 0 ID=cds-NIV78_RS26765;Parent=gene-NIV78_RS26765;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2276192,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024418.2;locus_tag=NIV78_RS26765;partial=true;product=ESPR-type extended signal peptide-containing protein;pseudo=true;transl_table=11 NZ_CP100137.1 RefSeq gene 2277614 2278153 . - . ID=gene-NIV78_RS26770;Name=NIV78_RS26770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26770 NZ_CP100137.1 GeneMarkS-2+ CDS 2277614 2278153 . - 0 ID=cds-WP_251107635.1;Parent=gene-NIV78_RS26770;Dbxref=Genbank:WP_251107635.1;Name=WP_251107635.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS26770;product=hypothetical protein;protein_id=WP_251107635.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2278154 2283391 . - . ID=gene-NIV78_RS26775;Name=NIV78_RS26775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26775 NZ_CP100137.1 GeneMarkS-2+ CDS 2278154 2283391 . - 0 ID=cds-WP_257757558.1;Parent=gene-NIV78_RS26775;Dbxref=Genbank:WP_257757558.1;Name=WP_257757558.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS26775;product=hypothetical protein;protein_id=WP_257757558.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2283276 2284811 . + . ID=gene-NIV78_RS26780;Name=NIV78_RS26780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26780 NZ_CP100137.1 Protein Homology CDS 2283276 2284811 . + 0 ID=cds-WP_232252191.1;Parent=gene-NIV78_RS26780;Dbxref=Genbank:WP_232252191.1;Name=WP_232252191.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017476.2;locus_tag=NIV78_RS26780;product=YadA-like family protein;protein_id=WP_232252191.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2284808 2285953 . + . ID=gene-NIV78_RS26785;Name=NIV78_RS26785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26785 NZ_CP100137.1 Protein Homology CDS 2284808 2285953 . + 0 ID=cds-WP_251107637.1;Parent=gene-NIV78_RS26785;Dbxref=Genbank:WP_251107637.1;Name=WP_251107637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733050.1;locus_tag=NIV78_RS26785;product=DUF2827 family protein;protein_id=WP_251107637.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2285977 2287128 . + . ID=gene-NIV78_RS26790;Name=NIV78_RS26790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26790 NZ_CP100137.1 Protein Homology CDS 2285977 2287128 . + 0 ID=cds-WP_251107638.1;Parent=gene-NIV78_RS26790;Dbxref=Genbank:WP_251107638.1;Name=WP_251107638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009899818.1;locus_tag=NIV78_RS26790;product=DUF2827 family protein;protein_id=WP_251107638.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2287180 2287725 . + . ID=gene-NIV78_RS26795;Name=NIV78_RS26795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26795 NZ_CP100137.1 Protein Homology CDS 2287180 2287725 . + 0 ID=cds-WP_017923515.1;Parent=gene-NIV78_RS26795;Dbxref=Genbank:WP_017923515.1;Name=WP_017923515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733310.1;locus_tag=NIV78_RS26795;product=DUF4019 domain-containing protein;protein_id=WP_017923515.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2287774 2288427 . - . ID=gene-NIV78_RS26800;Name=NIV78_RS26800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26800 NZ_CP100137.1 Protein Homology CDS 2287774 2288427 . - 0 ID=cds-WP_012733309.1;Parent=gene-NIV78_RS26800;Dbxref=Genbank:WP_012733309.1;Name=WP_012733309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733309.1;locus_tag=NIV78_RS26800;product=hypothetical protein;protein_id=WP_012733309.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2289172 2290218 . + . ID=gene-NIV78_RS26805;Name=NIV78_RS26805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26805 NZ_CP100137.1 Protein Homology CDS 2289172 2290218 . + 0 ID=cds-WP_017923514.1;Parent=gene-NIV78_RS26805;Dbxref=Genbank:WP_017923514.1;Name=WP_017923514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733308.1;locus_tag=NIV78_RS26805;product=aldo/keto reductase;protein_id=WP_017923514.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2290459 2291601 . - . ID=gene-NIV78_RS26810;Name=NIV78_RS26810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26810 NZ_CP100137.1 Protein Homology CDS 2290459 2291601 . - 0 ID=cds-WP_012733307.1;Parent=gene-NIV78_RS26810;Dbxref=Genbank:WP_012733307.1;Name=WP_012733307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733307.1;locus_tag=NIV78_RS26810;product=DUF2827 domain-containing protein;protein_id=WP_012733307.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2291772 2292002 . - . ID=gene-NIV78_RS26815;Name=NIV78_RS26815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26815 NZ_CP100137.1 Protein Homology CDS 2291772 2292002 . - 0 ID=cds-WP_012733306.1;Parent=gene-NIV78_RS26815;Dbxref=Genbank:WP_012733306.1;Name=WP_012733306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733306.1;locus_tag=NIV78_RS26815;product=hypothetical protein;protein_id=WP_012733306.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2292174 2293079 . - . ID=gene-NIV78_RS26820;Name=NIV78_RS26820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26820 NZ_CP100137.1 Protein Homology CDS 2292174 2293079 . - 0 ID=cds-WP_012733305.1;Parent=gene-NIV78_RS26820;Dbxref=Genbank:WP_012733305.1;Name=WP_012733305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689412.1;locus_tag=NIV78_RS26820;product=hypothetical protein;protein_id=WP_012733305.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2293159 2293500 . + . ID=gene-NIV78_RS26825;Name=NIV78_RS26825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26825 NZ_CP100137.1 Protein Homology CDS 2293159 2293500 . + 0 ID=cds-WP_012733304.1;Parent=gene-NIV78_RS26825;Dbxref=Genbank:WP_012733304.1;Name=WP_012733304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011326176.1;locus_tag=NIV78_RS26825;product=hypothetical protein;protein_id=WP_012733304.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2293619 2295034 . - . ID=gene-NIV78_RS26830;Name=NIV78_RS26830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26830 NZ_CP100137.1 Protein Homology CDS 2293619 2295034 . - 0 ID=cds-WP_257757562.1;Parent=gene-NIV78_RS26830;Dbxref=Genbank:WP_257757562.1;Name=WP_257757562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733303.1;locus_tag=NIV78_RS26830;product=MFS transporter;protein_id=WP_257757562.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2295538 2297121 . + . ID=gene-NIV78_RS26835;Name=NIV78_RS26835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26835 NZ_CP100137.1 Protein Homology CDS 2295538 2297121 . + 0 ID=cds-WP_017423371.1;Parent=gene-NIV78_RS26835;Dbxref=Genbank:WP_017423371.1;Name=WP_017423371.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732724.1;locus_tag=NIV78_RS26835;product=methyl-accepting chemotaxis protein;protein_id=WP_017423371.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2297307 2297738 . + . ID=gene-NIV78_RS26840;Name=NIV78_RS26840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26840 NZ_CP100137.1 Protein Homology CDS 2297307 2297738 . + 0 ID=cds-WP_017423370.1;Parent=gene-NIV78_RS26840;Dbxref=Genbank:WP_017423370.1;Name=WP_017423370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423370.1;locus_tag=NIV78_RS26840;product=hypothetical protein;protein_id=WP_017423370.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2298190 2298408 . - . ID=gene-NIV78_RS26845;Name=NIV78_RS26845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26845 NZ_CP100137.1 GeneMarkS-2+ CDS 2298190 2298408 . - 0 ID=cds-WP_144415946.1;Parent=gene-NIV78_RS26845;Dbxref=Genbank:WP_144415946.1;Name=WP_144415946.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS26845;product=hypothetical protein;protein_id=WP_144415946.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2298767 2300689 . + . ID=gene-NIV78_RS26850;Name=NIV78_RS26850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26850 NZ_CP100137.1 Protein Homology CDS 2298767 2300689 . + 0 ID=cds-WP_017924044.1;Parent=gene-NIV78_RS26850;Dbxref=Genbank:WP_017924044.1;Name=WP_017924044.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733301.1;locus_tag=NIV78_RS26850;product=methyl-accepting chemotaxis protein;protein_id=WP_017924044.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2301625 2302593 . + . ID=gene-NIV78_RS26855;Name=NIV78_RS26855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26855 NZ_CP100137.1 Protein Homology CDS 2301625 2302593 . + 0 ID=cds-WP_012733300.1;Parent=gene-NIV78_RS26855;Dbxref=Genbank:WP_012733300.1;Name=WP_012733300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880603.1;locus_tag=NIV78_RS26855;product=ABC transporter substrate-binding protein;protein_id=WP_012733300.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2302681 2304195 . + . ID=gene-NIV78_RS26860;Name=NIV78_RS26860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26860 NZ_CP100137.1 Protein Homology CDS 2302681 2304195 . + 0 ID=cds-WP_012733299.1;Parent=gene-NIV78_RS26860;Dbxref=Genbank:WP_012733299.1;Name=WP_012733299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756526.1;locus_tag=NIV78_RS26860;product=sugar ABC transporter ATP-binding protein;protein_id=WP_012733299.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2304192 2305232 . + . ID=gene-NIV78_RS26865;Name=NIV78_RS26865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26865 NZ_CP100137.1 Protein Homology CDS 2304192 2305232 . + 0 ID=cds-WP_012733298.1;Parent=gene-NIV78_RS26865;Dbxref=Genbank:WP_012733298.1;Name=WP_012733298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733298.1;locus_tag=NIV78_RS26865;product=ABC transporter permease;protein_id=WP_012733298.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2305229 2306311 . + . ID=gene-NIV78_RS26870;Name=yjfF;gbkey=Gene;gene=yjfF;gene_biotype=protein_coding;locus_tag=NIV78_RS26870 NZ_CP100137.1 Protein Homology CDS 2305229 2306311 . + 0 ID=cds-WP_012733297.1;Parent=gene-NIV78_RS26870;Dbxref=Genbank:WP_012733297.1;Name=WP_012733297.1;Ontology_term=GO:0055085,GO:0022857,GO:0016021;gbkey=CDS;gene=yjfF;go_component=integral component of membrane|0016021||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733297.1;locus_tag=NIV78_RS26870;product=sugar ABC transporter permease YjfF;protein_id=WP_012733297.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2306308 2307318 . + . ID=gene-NIV78_RS26875;Name=NIV78_RS26875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26875 NZ_CP100137.1 Protein Homology CDS 2306308 2307318 . + 0 ID=cds-WP_153478539.1;Parent=gene-NIV78_RS26875;Dbxref=Genbank:WP_153478539.1;Name=WP_153478539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733296.1;locus_tag=NIV78_RS26875;product=aldose epimerase;protein_id=WP_153478539.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2307438 2308520 . + . ID=gene-NIV78_RS26880;Name=NIV78_RS26880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26880 NZ_CP100137.1 Protein Homology CDS 2307438 2308520 . + 0 ID=cds-WP_017423467.1;Parent=gene-NIV78_RS26880;Dbxref=Genbank:WP_017423467.1;Name=WP_017423467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423467.1;locus_tag=NIV78_RS26880;product=galactose mutarotase;protein_id=WP_017423467.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2309200 2310717 . + . ID=gene-NIV78_RS26885;Name=NIV78_RS26885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26885 NZ_CP100137.1 Protein Homology CDS 2309200 2310717 . + 0 ID=cds-WP_017922914.1;Parent=gene-NIV78_RS26885;Dbxref=Genbank:WP_017922914.1;Name=WP_017922914.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733294.1;locus_tag=NIV78_RS26885;product=sensor domain-containing diguanylate cyclase;protein_id=WP_017922914.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2310940 2312685 . + . ID=gene-NIV78_RS26890;Name=NIV78_RS26890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26890 NZ_CP100137.1 Protein Homology CDS 2310940 2312685 . + 0 ID=cds-WP_017922915.1;Parent=gene-NIV78_RS26890;Dbxref=Genbank:WP_017922915.1;Name=WP_017922915.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733293.1;locus_tag=NIV78_RS26890;product=methyl-accepting chemotaxis protein;protein_id=WP_017922915.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 2313036 2313227 . + . ID=gene-NIV78_RS26895;Name=NIV78_RS26895;end_range=2313227,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS26895;partial=true;pseudo=true NZ_CP100137.1 Protein Homology CDS 2313036 2313227 . + 0 ID=cds-NIV78_RS26895;Parent=gene-NIV78_RS26895;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2313227,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012173261.1;locus_tag=NIV78_RS26895;partial=true;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 2313390 2313749 . + . ID=gene-NIV78_RS26900;Name=NIV78_RS26900;end_range=2313749,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS26900;partial=true;pseudo=true NZ_CP100137.1 Protein Homology CDS 2313390 2313749 . + 0 ID=cds-NIV78_RS26900;Parent=gene-NIV78_RS26900;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2313749,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014573.2;locus_tag=NIV78_RS26900;partial=true;product=NAD(P)H-dependent oxidoreductase;pseudo=true;transl_table=11 NZ_CP100137.1 RefSeq gene 2313867 2315114 . + . ID=gene-NIV78_RS26905;Name=NIV78_RS26905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26905 NZ_CP100137.1 Protein Homology CDS 2313867 2315114 . + 0 ID=cds-WP_012733292.1;Parent=gene-NIV78_RS26905;Dbxref=Genbank:WP_012733292.1;Name=WP_012733292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004554715.1;locus_tag=NIV78_RS26905;product=ROK family protein;protein_id=WP_012733292.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2315101 2316654 . + . ID=gene-NIV78_RS26910;Name=NIV78_RS26910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26910 NZ_CP100137.1 Protein Homology CDS 2315101 2316654 . + 0 ID=cds-WP_017922916.1;Parent=gene-NIV78_RS26910;Dbxref=Genbank:WP_017922916.1;Name=WP_017922916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545297.1;locus_tag=NIV78_RS26910;product=sugar ABC transporter ATP-binding protein;protein_id=WP_017922916.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2316695 2317732 . + . ID=gene-NIV78_RS26915;Name=NIV78_RS26915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26915 NZ_CP100137.1 Protein Homology CDS 2316695 2317732 . + 0 ID=cds-WP_017922917.1;Parent=gene-NIV78_RS26915;Dbxref=Genbank:WP_017922917.1;Name=WP_017922917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410134.1;locus_tag=NIV78_RS26915;product=ribose ABC transporter permease;protein_id=WP_017922917.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2317815 2318756 . + . ID=gene-NIV78_RS26920;Name=NIV78_RS26920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26920 NZ_CP100137.1 Protein Homology CDS 2317815 2318756 . + 0 ID=cds-WP_012733289.1;Parent=gene-NIV78_RS26920;Dbxref=Genbank:WP_012733289.1;Name=WP_012733289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733289.1;locus_tag=NIV78_RS26920;product=ABC transporter substrate-binding protein;protein_id=WP_012733289.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2319483 2319827 . + . ID=gene-NIV78_RS26925;Name=NIV78_RS26925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26925 NZ_CP100137.1 Protein Homology CDS 2319483 2319827 . + 0 ID=cds-WP_012733288.1;Parent=gene-NIV78_RS26925;Dbxref=Genbank:WP_012733288.1;Name=WP_012733288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733288.1;locus_tag=NIV78_RS26925;product=YXWGXW repeat-containing protein;protein_id=WP_012733288.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2319846 2320403 . + . ID=gene-NIV78_RS26930;Name=NIV78_RS26930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26930 NZ_CP100137.1 Protein Homology CDS 2319846 2320403 . + 0 ID=cds-WP_012733287.1;Parent=gene-NIV78_RS26930;Dbxref=Genbank:WP_012733287.1;Name=WP_012733287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733287.1;locus_tag=NIV78_RS26930;product=RNA polymerase sigma factor;protein_id=WP_012733287.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2320417 2320854 . + . ID=gene-NIV78_RS26935;Name=NIV78_RS26935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26935 NZ_CP100137.1 Protein Homology CDS 2320417 2320854 . + 0 ID=cds-WP_012733286.1;Parent=gene-NIV78_RS26935;Dbxref=Genbank:WP_012733286.1;Name=WP_012733286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733286.1;locus_tag=NIV78_RS26935;product=hypothetical protein;protein_id=WP_012733286.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2320851 2321333 . + . ID=gene-NIV78_RS26940;Name=NIV78_RS26940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26940 NZ_CP100137.1 Protein Homology CDS 2320851 2321333 . + 0 ID=cds-WP_012733285.1;Parent=gene-NIV78_RS26940;Dbxref=Genbank:WP_012733285.1;Name=WP_012733285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423469.1;locus_tag=NIV78_RS26940;product=periplasmic heavy metal sensor;protein_id=WP_012733285.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2321561 2323285 . + . ID=gene-NIV78_RS26945;Name=NIV78_RS26945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26945 NZ_CP100137.1 Protein Homology CDS 2321561 2323285 . + 0 ID=cds-WP_251107641.1;Parent=gene-NIV78_RS26945;Dbxref=Genbank:WP_251107641.1;Name=WP_251107641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423470.1;locus_tag=NIV78_RS26945;product=DUF3300 domain-containing protein;protein_id=WP_251107641.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2323745 2325658 . + . ID=gene-NIV78_RS26950;Name=NIV78_RS26950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26950 NZ_CP100137.1 Protein Homology CDS 2323745 2325658 . + 0 ID=cds-WP_198292463.1;Parent=gene-NIV78_RS26950;Dbxref=Genbank:WP_198292463.1;Name=WP_198292463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017778267.1;locus_tag=NIV78_RS26950;product=phosphatase PAP2 family protein;protein_id=WP_198292463.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2325821 2327629 . - . ID=gene-NIV78_RS26955;Name=NIV78_RS26955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26955 NZ_CP100137.1 Protein Homology CDS 2325821 2327629 . - 0 ID=cds-WP_017922924.1;Parent=gene-NIV78_RS26955;Dbxref=Genbank:WP_017922924.1;Name=WP_017922924.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733282.1;locus_tag=NIV78_RS26955;product=methyl-accepting chemotaxis protein;protein_id=WP_017922924.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2327807 2328949 . - . ID=gene-NIV78_RS26960;Name=NIV78_RS26960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26960 NZ_CP100137.1 Protein Homology CDS 2327807 2328949 . - 0 ID=cds-WP_051071143.1;Parent=gene-NIV78_RS26960;Dbxref=Genbank:WP_051071143.1;Name=WP_051071143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013588847.1;locus_tag=NIV78_RS26960;product=porin;protein_id=WP_051071143.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2329017 2331437 . - . ID=gene-NIV78_RS26965;Name=NIV78_RS26965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26965 NZ_CP100137.1 Protein Homology CDS 2329017 2331437 . - 0 ID=cds-WP_017922926.1;Parent=gene-NIV78_RS26965;Dbxref=Genbank:WP_017922926.1;Name=WP_017922926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733280.1;locus_tag=NIV78_RS26965;product=glycoside hydrolase family 31 protein;protein_id=WP_017922926.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2331467 2332774 . - . ID=gene-NIV78_RS26970;Name=NIV78_RS26970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26970 NZ_CP100137.1 Protein Homology CDS 2331467 2332774 . - 0 ID=cds-WP_012733279.1;Parent=gene-NIV78_RS26970;Dbxref=Genbank:WP_012733279.1;Name=WP_012733279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733279.1;locus_tag=NIV78_RS26970;product=MFS transporter;protein_id=WP_012733279.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2333125 2334660 . - . ID=gene-NIV78_RS26975;Name=NIV78_RS26975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26975 NZ_CP100137.1 Protein Homology CDS 2333125 2334660 . - 0 ID=cds-WP_251107642.1;Parent=gene-NIV78_RS26975;Dbxref=Genbank:WP_251107642.1;Name=WP_251107642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009240041.1;locus_tag=NIV78_RS26975;product=aldehyde dehydrogenase family protein;protein_id=WP_251107642.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2334937 2335626 . + . ID=gene-NIV78_RS26980;Name=NIV78_RS26980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26980 NZ_CP100137.1 Protein Homology CDS 2334937 2335626 . + 0 ID=cds-WP_012733277.1;Parent=gene-NIV78_RS26980;Dbxref=Genbank:WP_012733277.1;Name=WP_012733277.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010119441.1;locus_tag=NIV78_RS26980;product=TetR family transcriptional regulator;protein_id=WP_012733277.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2335665 2337455 . - . ID=gene-NIV78_RS26985;Name=NIV78_RS26985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26985 NZ_CP100137.1 Protein Homology CDS 2335665 2337455 . - 0 ID=cds-WP_017922929.1;Parent=gene-NIV78_RS26985;Dbxref=Genbank:WP_017922929.1;Name=WP_017922929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733276.1;locus_tag=NIV78_RS26985;product=phospholipase D-like domain-containing protein;protein_id=WP_017922929.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2337664 2338425 . - . ID=gene-NIV78_RS26990;Name=NIV78_RS26990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26990 NZ_CP100137.1 Protein Homology CDS 2337664 2338425 . - 0 ID=cds-WP_017924610.1;Parent=gene-NIV78_RS26990;Dbxref=Genbank:WP_017924610.1;Name=WP_017924610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689396.1;locus_tag=NIV78_RS26990;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_017924610.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2338636 2338830 . + . ID=gene-NIV78_RS26995;Name=NIV78_RS26995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS26995 NZ_CP100137.1 Protein Homology CDS 2338636 2338830 . + 0 ID=cds-WP_012733274.1;Parent=gene-NIV78_RS26995;Dbxref=Genbank:WP_012733274.1;Name=WP_012733274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733274.1;locus_tag=NIV78_RS26995;product=hypothetical protein;protein_id=WP_012733274.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2338948 2339811 . + . ID=gene-NIV78_RS27000;Name=NIV78_RS27000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27000 NZ_CP100137.1 Protein Homology CDS 2338948 2339811 . + 0 ID=cds-WP_012733273.1;Parent=gene-NIV78_RS27000;Dbxref=Genbank:WP_012733273.1;Name=WP_012733273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689394.1;locus_tag=NIV78_RS27000;product=DMT family transporter;protein_id=WP_012733273.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2339871 2340734 . + . ID=gene-NIV78_RS27005;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=NIV78_RS27005 NZ_CP100137.1 Protein Homology CDS 2339871 2340734 . + 0 ID=cds-WP_012733272.1;Parent=gene-NIV78_RS27005;Dbxref=Genbank:WP_012733272.1;Name=WP_012733272.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733272.1;locus_tag=NIV78_RS27005;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_012733272.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2340763 2341386 . + . ID=gene-NIV78_RS27010;Name=NIV78_RS27010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27010 NZ_CP100137.1 Protein Homology CDS 2340763 2341386 . + 0 ID=cds-WP_012733271.1;Parent=gene-NIV78_RS27010;Dbxref=Genbank:WP_012733271.1;Name=WP_012733271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733271.1;locus_tag=NIV78_RS27010;product=LysE family translocator;protein_id=WP_012733271.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2341667 2342839 . + . ID=gene-NIV78_RS27015;Name=NIV78_RS27015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27015 NZ_CP100137.1 Protein Homology CDS 2341667 2342839 . + 0 ID=cds-WP_017923609.1;Parent=gene-NIV78_RS27015;Dbxref=Genbank:WP_017923609.1;Name=WP_017923609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425360.1;locus_tag=NIV78_RS27015;product=porin;protein_id=WP_017923609.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2343059 2344735 . - . ID=gene-NIV78_RS27020;Name=NIV78_RS27020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27020 NZ_CP100137.1 Protein Homology CDS 2343059 2344735 . - 0 ID=cds-WP_035981207.1;Parent=gene-NIV78_RS27020;Dbxref=Genbank:WP_035981207.1;Name=WP_035981207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689389.1;locus_tag=NIV78_RS27020;product=peptidase S1;protein_id=WP_035981207.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2344930 2346513 . - . ID=gene-NIV78_RS27025;Name=NIV78_RS27025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27025 NZ_CP100137.1 Protein Homology CDS 2344930 2346513 . - 0 ID=cds-WP_017924501.1;Parent=gene-NIV78_RS27025;Dbxref=Genbank:WP_017924501.1;Name=WP_017924501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733268.1;locus_tag=NIV78_RS27025;product=S53 family peptidase;protein_id=WP_017924501.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2347045 2347674 . - . ID=gene-NIV78_RS27030;Name=NIV78_RS27030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27030 NZ_CP100137.1 Protein Homology CDS 2347045 2347674 . - 0 ID=cds-WP_017924716.1;Parent=gene-NIV78_RS27030;Dbxref=Genbank:WP_017924716.1;Name=WP_017924716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752375.1;locus_tag=NIV78_RS27030;product=LysE family translocator;protein_id=WP_017924716.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2347899 2348363 . + . ID=gene-NIV78_RS27035;Name=NIV78_RS27035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27035 NZ_CP100137.1 Protein Homology CDS 2347899 2348363 . + 0 ID=cds-WP_012733266.1;Parent=gene-NIV78_RS27035;Dbxref=Genbank:WP_012733266.1;Name=WP_012733266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188527.1;locus_tag=NIV78_RS27035;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_012733266.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2348434 2349348 . - . ID=gene-NIV78_RS27040;Name=NIV78_RS27040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27040 NZ_CP100137.1 Protein Homology CDS 2348434 2349348 . - 0 ID=cds-WP_012733265.1;Parent=gene-NIV78_RS27040;Dbxref=Genbank:WP_012733265.1;Name=WP_012733265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733265.1;locus_tag=NIV78_RS27040;product=LysR family transcriptional regulator;protein_id=WP_012733265.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2349501 2350457 . + . ID=gene-NIV78_RS27045;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=NIV78_RS27045 NZ_CP100137.1 Protein Homology CDS 2349501 2350457 . + 0 ID=cds-WP_017423818.1;Parent=gene-NIV78_RS27045;Dbxref=Genbank:WP_017423818.1;Name=WP_017423818.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733264.1;locus_tag=NIV78_RS27045;product=agmatinase;protein_id=WP_017423818.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2350947 2352101 . + . ID=gene-NIV78_RS27050;Name=NIV78_RS27050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27050 NZ_CP100137.1 Protein Homology CDS 2350947 2352101 . + 0 ID=cds-WP_012733263.1;Parent=gene-NIV78_RS27050;Dbxref=Genbank:WP_012733263.1;Name=WP_012733263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482011.1;locus_tag=NIV78_RS27050;product=glycosyl hydrolase 53 family protein;protein_id=WP_012733263.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2352168 2353424 . - . ID=gene-NIV78_RS27055;Name=NIV78_RS27055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27055 NZ_CP100137.1 Protein Homology CDS 2352168 2353424 . - 0 ID=cds-WP_100556596.1;Parent=gene-NIV78_RS27055;Dbxref=Genbank:WP_100556596.1;Name=WP_100556596.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733262.1;locus_tag=NIV78_RS27055;product=MFS transporter;protein_id=WP_100556596.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2353429 2355393 . - . ID=gene-NIV78_RS27060;Name=NIV78_RS27060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27060 NZ_CP100137.1 Protein Homology CDS 2353429 2355393 . - 0 ID=cds-WP_043225618.1;Parent=gene-NIV78_RS27060;Dbxref=Genbank:WP_043225618.1;Name=WP_043225618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733261.1;locus_tag=NIV78_RS27060;product=beta-galactosidase;protein_id=WP_043225618.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2355431 2356282 . - . ID=gene-NIV78_RS27065;Name=NIV78_RS27065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27065 NZ_CP100137.1 Protein Homology CDS 2355431 2356282 . - 0 ID=cds-WP_012733260.1;Parent=gene-NIV78_RS27065;Dbxref=Genbank:WP_012733260.1;Name=WP_012733260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026583.1;locus_tag=NIV78_RS27065;product=carbohydrate ABC transporter permease;protein_id=WP_012733260.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2356306 2357223 . - . ID=gene-NIV78_RS27070;Name=NIV78_RS27070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27070 NZ_CP100137.1 Protein Homology CDS 2356306 2357223 . - 0 ID=cds-WP_012733259.1;Parent=gene-NIV78_RS27070;Dbxref=Genbank:WP_012733259.1;Name=WP_012733259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548501.1;locus_tag=NIV78_RS27070;product=sugar ABC transporter permease;protein_id=WP_012733259.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2357293 2358534 . - . ID=gene-NIV78_RS27075;Name=NIV78_RS27075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27075 NZ_CP100137.1 Protein Homology CDS 2357293 2358534 . - 0 ID=cds-WP_017923079.1;Parent=gene-NIV78_RS27075;Dbxref=Genbank:WP_017923079.1;Name=WP_017923079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372363.1;locus_tag=NIV78_RS27075;product=extracellular solute-binding protein;protein_id=WP_017923079.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2358599 2359753 . - . ID=gene-NIV78_RS27080;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=NIV78_RS27080 NZ_CP100137.1 Protein Homology CDS 2358599 2359753 . - 0 ID=cds-WP_043225620.1;Parent=gene-NIV78_RS27080;Dbxref=Genbank:WP_043225620.1;Name=WP_043225620.1;Ontology_term=GO:0005524,GO:0140359;gbkey=CDS;gene=ugpC;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498108.1;locus_tag=NIV78_RS27080;product=sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC;protein_id=WP_043225620.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2360054 2361100 . + . ID=gene-NIV78_RS27085;Name=NIV78_RS27085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27085 NZ_CP100137.1 Protein Homology CDS 2360054 2361100 . + 0 ID=cds-WP_017423788.1;Parent=gene-NIV78_RS27085;Dbxref=Genbank:WP_017423788.1;Name=WP_017423788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733256.1;locus_tag=NIV78_RS27085;product=LacI family transcriptional regulator;protein_id=WP_017423788.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2361396 2362763 . - . ID=gene-NIV78_RS27090;Name=NIV78_RS27090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27090 NZ_CP100137.1 Protein Homology CDS 2361396 2362763 . - 0 ID=cds-WP_251107920.1;Parent=gene-NIV78_RS27090;Dbxref=Genbank:WP_251107920.1;Name=WP_251107920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423789.1;locus_tag=NIV78_RS27090;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_251107920.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2362956 2363843 . + . ID=gene-NIV78_RS27095;Name=NIV78_RS27095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27095 NZ_CP100137.1 Protein Homology CDS 2362956 2363843 . + 0 ID=cds-WP_012733254.1;Parent=gene-NIV78_RS27095;Dbxref=Genbank:WP_012733254.1;Name=WP_012733254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733254.1;locus_tag=NIV78_RS27095;product=DMT family transporter;protein_id=WP_012733254.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2364080 2365660 . + . ID=gene-NIV78_RS27100;Name=NIV78_RS27100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27100 NZ_CP100137.1 Protein Homology CDS 2364080 2365660 . + 0 ID=cds-WP_012733253.1;Parent=gene-NIV78_RS27100;Dbxref=Genbank:WP_012733253.1;Name=WP_012733253.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733253.1;locus_tag=NIV78_RS27100;product=inorganic phosphate transporter;protein_id=WP_012733253.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2365867 2366592 . + . ID=gene-NIV78_RS27105;Name=NIV78_RS27105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27105 NZ_CP100137.1 Protein Homology CDS 2365867 2366592 . + 0 ID=cds-WP_017924173.1;Parent=gene-NIV78_RS27105;Dbxref=Genbank:WP_017924173.1;Name=WP_017924173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733252.1;locus_tag=NIV78_RS27105;product=2OG-Fe(II) oxygenase;protein_id=WP_017924173.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2366675 2368099 . - . ID=gene-NIV78_RS27110;Name=NIV78_RS27110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27110 NZ_CP100137.1 Protein Homology CDS 2366675 2368099 . - 0 ID=cds-WP_012733251.1;Parent=gene-NIV78_RS27110;Dbxref=Genbank:WP_012733251.1;Name=WP_012733251.1;Ontology_term=GO:0006855,GO:0009410,GO:0005887;gbkey=CDS;go_component=integral component of plasma membrane|0005887||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA,response to xenobiotic stimulus|0009410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733251.1;locus_tag=NIV78_RS27110;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_012733251.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2368295 2368537 . - . ID=gene-NIV78_RS27115;Name=NIV78_RS27115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27115 NZ_CP100137.1 Protein Homology CDS 2368295 2368537 . - 0 ID=cds-WP_012733250.1;Parent=gene-NIV78_RS27115;Dbxref=Genbank:WP_012733250.1;Name=WP_012733250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733250.1;locus_tag=NIV78_RS27115;product=DUF3717 domain-containing protein;protein_id=WP_012733250.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2368807 2368920 . - . ID=gene-NIV78_RS27120;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=NIV78_RS27120 NZ_CP100137.1 cmsearch rRNA 2368807 2368920 . - . ID=rna-NIV78_RS27120;Parent=gene-NIV78_RS27120;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS27120;product=5S ribosomal RNA NZ_CP100137.1 cmsearch exon 2368807 2368920 . - . ID=exon-NIV78_RS27120-1;Parent=rna-NIV78_RS27120;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS27120;product=5S ribosomal RNA NZ_CP100137.1 RefSeq gene 2369060 2371940 . - . ID=gene-NIV78_RS27125;Name=NIV78_RS27125;gbkey=Gene;gene_biotype=rRNA;locus_tag=NIV78_RS27125 NZ_CP100137.1 cmsearch rRNA 2369060 2371940 . - . ID=rna-NIV78_RS27125;Parent=gene-NIV78_RS27125;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS27125;product=23S ribosomal RNA NZ_CP100137.1 cmsearch exon 2369060 2371940 . - . ID=exon-NIV78_RS27125-1;Parent=rna-NIV78_RS27125;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS27125;product=23S ribosomal RNA NZ_CP100137.1 RefSeq gene 2372245 2372320 . - . ID=gene-NIV78_RS27130;Name=NIV78_RS27130;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS27130 NZ_CP100137.1 tRNAscan-SE tRNA 2372245 2372320 . - . ID=rna-NIV78_RS27130;Parent=gene-NIV78_RS27130;anticodon=(pos:complement(2372285..2372287));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS27130;product=tRNA-Ala NZ_CP100137.1 tRNAscan-SE exon 2372245 2372320 . - . ID=exon-NIV78_RS27130-1;Parent=rna-NIV78_RS27130;anticodon=(pos:complement(2372285..2372287));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS27130;product=tRNA-Ala NZ_CP100137.1 RefSeq gene 2372361 2372437 . - . ID=gene-NIV78_RS27135;Name=NIV78_RS27135;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS27135 NZ_CP100137.1 tRNAscan-SE tRNA 2372361 2372437 . - . ID=rna-NIV78_RS27135;Parent=gene-NIV78_RS27135;anticodon=(pos:complement(2372401..2372403));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS27135;product=tRNA-Ile NZ_CP100137.1 tRNAscan-SE exon 2372361 2372437 . - . ID=exon-NIV78_RS27135-1;Parent=rna-NIV78_RS27135;anticodon=(pos:complement(2372401..2372403));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS27135;product=tRNA-Ile NZ_CP100137.1 RefSeq gene 2372502 2374034 . - . ID=gene-NIV78_RS27140;Name=NIV78_RS27140;gbkey=Gene;gene_biotype=rRNA;locus_tag=NIV78_RS27140 NZ_CP100137.1 cmsearch rRNA 2372502 2374034 . - . ID=rna-NIV78_RS27140;Parent=gene-NIV78_RS27140;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS27140;product=16S ribosomal RNA NZ_CP100137.1 cmsearch exon 2372502 2374034 . - . ID=exon-NIV78_RS27140-1;Parent=rna-NIV78_RS27140;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS27140;product=16S ribosomal RNA NZ_CP100137.1 RefSeq gene 2374607 2375155 . - . ID=gene-NIV78_RS27145;Name=NIV78_RS27145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27145 NZ_CP100137.1 Protein Homology CDS 2374607 2375155 . - 0 ID=cds-WP_017922950.1;Parent=gene-NIV78_RS27145;Dbxref=Genbank:WP_017922950.1;Name=WP_017922950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733249.1;locus_tag=NIV78_RS27145;product=HD domain-containing protein;protein_id=WP_017922950.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2375234 2376550 . - . ID=gene-NIV78_RS27150;Name=phnA;gbkey=Gene;gene=phnA;gene_biotype=protein_coding;locus_tag=NIV78_RS27150 NZ_CP100137.1 Protein Homology CDS 2375234 2376550 . - 0 ID=cds-WP_017922949.1;Parent=gene-NIV78_RS27150;Dbxref=Genbank:WP_017922949.1;Name=WP_017922949.1;Ontology_term=GO:0019636,GO:0047400;gbkey=CDS;gene=phnA;go_function=phosphonoacetate hydrolase activity|0047400||IEA;go_process=phosphonoacetate metabolic process|0019636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423845.1;locus_tag=NIV78_RS27150;product=phosphonoacetate hydrolase;protein_id=WP_017922949.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2376685 2377563 . - . ID=gene-NIV78_RS27155;Name=phnV;gbkey=Gene;gene=phnV;gene_biotype=protein_coding;locus_tag=NIV78_RS27155 NZ_CP100137.1 Protein Homology CDS 2376685 2377563 . - 0 ID=cds-WP_017423847.1;Parent=gene-NIV78_RS27155;Dbxref=Genbank:WP_017423847.1;Name=WP_017423847.1;Ontology_term=GO:0033223,GO:0033225,GO:0005887,GO:0055052;gbkey=CDS;gene=phnV;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423847.1;locus_tag=NIV78_RS27155;product=2-aminoethylphosphonate ABC transport system%2C membrane component PhnV;protein_id=WP_017423847.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2377553 2378482 . - . ID=gene-NIV78_RS27160;Name=phnU;gbkey=Gene;gene=phnU;gene_biotype=protein_coding;locus_tag=NIV78_RS27160 NZ_CP100137.1 Protein Homology CDS 2377553 2378482 . - 0 ID=cds-WP_020379703.1;Parent=gene-NIV78_RS27160;Dbxref=Genbank:WP_020379703.1;Name=WP_020379703.1;Ontology_term=GO:0033223,GO:0033225,GO:0005887,GO:0055052;gbkey=CDS;gene=phnU;go_component=integral component of plasma membrane|0005887||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603337.1;locus_tag=NIV78_RS27160;product=2-aminoethylphosphonate ABC transporter permease subunit;protein_id=WP_020379703.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2378460 2379557 . - . ID=gene-NIV78_RS27165;Name=phnT;gbkey=Gene;gene=phnT;gene_biotype=protein_coding;locus_tag=NIV78_RS27165 NZ_CP100137.1 Protein Homology CDS 2378460 2379557 . - 0 ID=cds-WP_012733245.1;Parent=gene-NIV78_RS27165;Dbxref=Genbank:WP_012733245.1;Name=WP_012733245.1;Ontology_term=GO:0033223,GO:0005524,GO:0033225,GO:0009898,GO:0055052;gbkey=CDS;gene=phnT;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011852687.1;locus_tag=NIV78_RS27165;product=2-aminoethylphosphonate ABC transport system ATP-binding subunit PhnT;protein_id=WP_012733245.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2379577 2380659 . - . ID=gene-NIV78_RS27170;Name=phnS;gbkey=Gene;gene=phnS;gene_biotype=protein_coding;locus_tag=NIV78_RS27170 NZ_CP100137.1 Protein Homology CDS 2379577 2380659 . - 0 ID=cds-WP_017922948.1;Parent=gene-NIV78_RS27170;Dbxref=Genbank:WP_017922948.1;Name=WP_017922948.1;Ontology_term=GO:0033223,GO:0033225,GO:0033226,GO:0030288,GO:0031362,GO:0055052;gbkey=CDS;gene=phnS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,anchored component of external side of plasma membrane|0031362||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA,2-aminoethylphosphonate binding|0033226||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733244.1;locus_tag=NIV78_RS27170;product=2-aminoethylphosphonate ABC transporter substrate-binding protein;protein_id=WP_017922948.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2380917 2382029 . + . ID=gene-NIV78_RS27175;Name=NIV78_RS27175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27175 NZ_CP100137.1 Protein Homology CDS 2380917 2382029 . + 0 ID=cds-WP_017423850.1;Parent=gene-NIV78_RS27175;Dbxref=Genbank:WP_017423850.1;Name=WP_017423850.1;Ontology_term=GO:0019700,GO:0047304;gbkey=CDS;go_function=2-aminoethylphosphonate-pyruvate transaminase activity|0047304||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423850.1;locus_tag=NIV78_RS27175;product=2-aminoethylphosphonate--pyruvate transaminase;protein_id=WP_017423850.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2382127 2383494 . - . ID=gene-NIV78_RS27180;Name=NIV78_RS27180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27180 NZ_CP100137.1 Protein Homology CDS 2382127 2383494 . - 0 ID=cds-WP_012733242.1;Parent=gene-NIV78_RS27180;Dbxref=Genbank:WP_012733242.1;Name=WP_012733242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480491.1;locus_tag=NIV78_RS27180;product=MFS transporter;protein_id=WP_012733242.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2383573 2384427 . - . ID=gene-NIV78_RS27185;Name=NIV78_RS27185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27185 NZ_CP100137.1 Protein Homology CDS 2383573 2384427 . - 0 ID=cds-WP_017922947.1;Parent=gene-NIV78_RS27185;Dbxref=Genbank:WP_017922947.1;Name=WP_017922947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602966.1;locus_tag=NIV78_RS27185;product=shikimate dehydrogenase;protein_id=WP_017922947.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2384424 2384876 . - . ID=gene-NIV78_RS27190;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=NIV78_RS27190 NZ_CP100137.1 Protein Homology CDS 2384424 2384876 . - 0 ID=cds-WP_012733240.1;Parent=gene-NIV78_RS27190;Dbxref=Genbank:WP_012733240.1;Name=WP_012733240.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733240.1;locus_tag=NIV78_RS27190;product=type II 3-dehydroquinate dehydratase;protein_id=WP_012733240.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2385029 2385151 . - . ID=gene-NIV78_RS27195;Name=NIV78_RS27195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27195 NZ_CP100137.1 GeneMarkS-2+ CDS 2385029 2385151 . - 0 ID=cds-WP_254985467.1;Parent=gene-NIV78_RS27195;Dbxref=Genbank:WP_254985467.1;Name=WP_254985467.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS27195;product=hypothetical protein;protein_id=WP_254985467.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2385150 2387042 . + . ID=gene-NIV78_RS27200;Name=NIV78_RS27200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27200 NZ_CP100137.1 Protein Homology CDS 2385150 2387042 . + 0 ID=cds-WP_124837613.1;Parent=gene-NIV78_RS27200;Dbxref=Genbank:WP_124837613.1;Name=WP_124837613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546893.1;locus_tag=NIV78_RS27200;product=TIM barrel protein;protein_id=WP_124837613.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2387239 2387499 . + . ID=gene-NIV78_RS27205;Name=NIV78_RS27205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27205 NZ_CP100137.1 Protein Homology CDS 2387239 2387499 . + 0 ID=cds-WP_012733238.1;Parent=gene-NIV78_RS27205;Dbxref=Genbank:WP_012733238.1;Name=WP_012733238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756354.1;locus_tag=NIV78_RS27205;product=hypothetical protein;protein_id=WP_012733238.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2387797 2388570 . - . ID=gene-NIV78_RS27210;Name=NIV78_RS27210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27210 NZ_CP100137.1 Protein Homology CDS 2387797 2388570 . - 0 ID=cds-WP_017924271.1;Parent=gene-NIV78_RS27210;Dbxref=Genbank:WP_017924271.1;Name=WP_017924271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733237.1;locus_tag=NIV78_RS27210;product=AraC family transcriptional regulator;protein_id=WP_017924271.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2388675 2389952 . - . ID=gene-NIV78_RS27215;Name=NIV78_RS27215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27215 NZ_CP100137.1 Protein Homology CDS 2388675 2389952 . - 0 ID=cds-WP_012733236.1;Parent=gene-NIV78_RS27215;Dbxref=Genbank:WP_012733236.1;Name=WP_012733236.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013342746.1;locus_tag=NIV78_RS27215;product=FAD-dependent oxidoreductase;protein_id=WP_012733236.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2389949 2390239 . - . ID=gene-NIV78_RS27220;Name=NIV78_RS27220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27220 NZ_CP100137.1 Protein Homology CDS 2389949 2390239 . - 0 ID=cds-WP_012733235.1;Parent=gene-NIV78_RS27220;Dbxref=Genbank:WP_012733235.1;Name=WP_012733235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017775436.1;locus_tag=NIV78_RS27220;product=2Fe-2S iron-sulfur cluster-binding protein;protein_id=WP_012733235.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2390232 2391359 . - . ID=gene-NIV78_RS27225;Name=NIV78_RS27225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27225 NZ_CP100137.1 Protein Homology CDS 2390232 2391359 . - 0 ID=cds-WP_251107645.1;Parent=gene-NIV78_RS27225;Dbxref=Genbank:WP_251107645.1;Name=WP_251107645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733234.1;locus_tag=NIV78_RS27225;product=FAD-dependent oxidoreductase;protein_id=WP_251107645.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2391359 2392324 . - . ID=gene-NIV78_RS27230;Name=NIV78_RS27230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27230 NZ_CP100137.1 Protein Homology CDS 2391359 2392324 . - 0 ID=cds-WP_017924274.1;Parent=gene-NIV78_RS27230;Dbxref=Genbank:WP_017924274.1;Name=WP_017924274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689358.1;locus_tag=NIV78_RS27230;product=4-hydroxyproline epimerase;protein_id=WP_017924274.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2392666 2393808 . + . ID=gene-NIV78_RS27235;Name=NIV78_RS27235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27235 NZ_CP100137.1 Protein Homology CDS 2392666 2393808 . + 0 ID=cds-WP_012733232.1;Parent=gene-NIV78_RS27235;Dbxref=Genbank:WP_012733232.1;Name=WP_012733232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406882.1;locus_tag=NIV78_RS27235;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_012733232.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2394244 2395539 . + . ID=gene-NIV78_RS27240;Name=NIV78_RS27240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27240 NZ_CP100137.1 Protein Homology CDS 2394244 2395539 . + 0 ID=cds-WP_012733231.1;Parent=gene-NIV78_RS27240;Dbxref=Genbank:WP_012733231.1;Name=WP_012733231.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733231.1;locus_tag=NIV78_RS27240;product=MFS transporter;protein_id=WP_012733231.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2395636 2396070 . - . ID=gene-NIV78_RS27245;Name=NIV78_RS27245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27245 NZ_CP100137.1 Protein Homology CDS 2395636 2396070 . - 0 ID=cds-WP_012733230.1;Parent=gene-NIV78_RS27245;Dbxref=Genbank:WP_012733230.1;Name=WP_012733230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604064.1;locus_tag=NIV78_RS27245;product=DoxX family protein;protein_id=WP_012733230.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2396454 2397017 . + . ID=gene-NIV78_RS27250;Name=NIV78_RS27250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27250 NZ_CP100137.1 Protein Homology CDS 2396454 2397017 . + 0 ID=cds-WP_017424624.1;Parent=gene-NIV78_RS27250;Dbxref=Genbank:WP_017424624.1;Name=WP_017424624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424624.1;locus_tag=NIV78_RS27250;product=hypothetical protein;protein_id=WP_017424624.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2397136 2398683 . - . ID=gene-NIV78_RS27255;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=NIV78_RS27255 NZ_CP100137.1 Protein Homology CDS 2397136 2398683 . - 0 ID=cds-WP_017922515.1;Parent=gene-NIV78_RS27255;Dbxref=Genbank:WP_017922515.1;Name=WP_017922515.1;Ontology_term=GO:0046392,GO:0008867;gbkey=CDS;gene=garD;go_function=galactarate dehydratase activity|0008867||IEA;go_process=galactarate catabolic process|0046392||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756361.1;locus_tag=NIV78_RS27255;product=galactarate dehydratase;protein_id=WP_017922515.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2398906 2399823 . + . ID=gene-NIV78_RS27260;Name=kdgD;gbkey=Gene;gene=kdgD;gene_biotype=protein_coding;locus_tag=NIV78_RS27260 NZ_CP100137.1 Protein Homology CDS 2398906 2399823 . + 0 ID=cds-WP_124837900.1;Parent=gene-NIV78_RS27260;Dbxref=Genbank:WP_124837900.1;Name=WP_124837900.1;Ontology_term=GO:0047448;gbkey=CDS;gene=kdgD;go_function=5-dehydro-4-deoxyglucarate dehydratase activity|0047448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010094246.1;locus_tag=NIV78_RS27260;product=5-dehydro-4-deoxyglucarate dehydratase;protein_id=WP_124837900.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2399934 2400119 . - . ID=gene-NIV78_RS27265;Name=NIV78_RS27265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27265 NZ_CP100137.1 GeneMarkS-2+ CDS 2399934 2400119 . - 0 ID=cds-WP_017432691.1;Parent=gene-NIV78_RS27265;Dbxref=Genbank:WP_017432691.1;Name=WP_017432691.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS27265;product=hypothetical protein;protein_id=WP_017432691.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 2400034 2400291 . - . ID=gene-NIV78_RS27270;Name=NIV78_RS27270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS27270;partial=true;pseudo=true;start_range=.,2400034 NZ_CP100137.1 Protein Homology CDS 2400034 2400291 . - 0 ID=cds-NIV78_RS27270;Parent=gene-NIV78_RS27270;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008644050.1;locus_tag=NIV78_RS27270;partial=true;product=tryptophan--tRNA ligase;pseudo=true;start_range=.,2400034;transl_table=11 NZ_CP100137.1 RefSeq gene 2400701 2402278 . - . ID=gene-NIV78_RS27275;Name=NIV78_RS27275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27275 NZ_CP100137.1 Protein Homology CDS 2400701 2402278 . - 0 ID=cds-WP_017922513.1;Parent=gene-NIV78_RS27275;Dbxref=Genbank:WP_017922513.1;Name=WP_017922513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406866.1;locus_tag=NIV78_RS27275;product=aldehyde dehydrogenase (NADP(+));protein_id=WP_017922513.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2402543 2403904 . + . ID=gene-NIV78_RS27280;Name=NIV78_RS27280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27280 NZ_CP100137.1 Protein Homology CDS 2402543 2403904 . + 0 ID=cds-WP_012733226.1;Parent=gene-NIV78_RS27280;Dbxref=Genbank:WP_012733226.1;Name=WP_012733226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733226.1;locus_tag=NIV78_RS27280;product=MFS transporter;protein_id=WP_012733226.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2404406 2404804 . + . ID=gene-NIV78_RS27285;Name=NIV78_RS27285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27285 NZ_CP100137.1 Protein Homology CDS 2404406 2404804 . + 0 ID=cds-WP_012733225.1;Parent=gene-NIV78_RS27285;Dbxref=Genbank:WP_012733225.1;Name=WP_012733225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424622.1;locus_tag=NIV78_RS27285;product=hypothetical protein;protein_id=WP_012733225.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2404899 2406320 . + . ID=gene-NIV78_RS27290;Name=hpnJ;gbkey=Gene;gene=hpnJ;gene_biotype=protein_coding;locus_tag=NIV78_RS27290 NZ_CP100137.1 Protein Homology CDS 2404899 2406320 . + 0 ID=cds-WP_017424621.1-2;Parent=gene-NIV78_RS27290;Dbxref=Genbank:WP_017424621.1;Name=WP_017424621.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;gene=hpnJ;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007181785.1;locus_tag=NIV78_RS27290;product=hopanoid biosynthesis associated radical SAM protein HpnJ;protein_id=WP_017424621.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2406320 2407585 . + . ID=gene-NIV78_RS27295;Name=hpnI;gbkey=Gene;gene=hpnI;gene_biotype=protein_coding;locus_tag=NIV78_RS27295 NZ_CP100137.1 Protein Homology CDS 2406320 2407585 . + 0 ID=cds-WP_012733223.1;Parent=gene-NIV78_RS27295;Dbxref=Genbank:WP_012733223.1;Name=WP_012733223.1;Ontology_term=GO:0016757;gbkey=CDS;gene=hpnI;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733223.1;locus_tag=NIV78_RS27295;product=bacteriohopanetetrol glucosamine biosynthesis glycosyltransferase HpnI;protein_id=WP_012733223.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2407677 2408669 . + . ID=gene-NIV78_RS27300;Name=NIV78_RS27300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27300 NZ_CP100137.1 Protein Homology CDS 2407677 2408669 . + 0 ID=cds-WP_100556565.1;Parent=gene-NIV78_RS27300;Dbxref=Genbank:WP_100556565.1;Name=WP_100556565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733222.1;locus_tag=NIV78_RS27300;product=flippase-like domain-containing protein;protein_id=WP_100556565.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2408942 2409901 . + . ID=gene-NIV78_RS27305;Name=NIV78_RS27305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27305 NZ_CP100137.1 Protein Homology CDS 2408942 2409901 . + 0 ID=cds-WP_251107646.1;Parent=gene-NIV78_RS27305;Dbxref=Genbank:WP_251107646.1;Name=WP_251107646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733221.1;locus_tag=NIV78_RS27305;product=helix-turn-helix domain-containing protein;protein_id=WP_251107646.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2410045 2411103 . + . ID=gene-NIV78_RS27310;Name=NIV78_RS27310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27310 NZ_CP100137.1 Protein Homology CDS 2410045 2411103 . + 0 ID=cds-WP_017924210.1;Parent=gene-NIV78_RS27310;Dbxref=Genbank:WP_017924210.1;Name=WP_017924210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733220.1;locus_tag=NIV78_RS27310;product=sugar ABC transporter substrate-binding protein;protein_id=WP_017924210.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2411176 2411982 . + . ID=gene-NIV78_RS27315;Name=NIV78_RS27315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27315 NZ_CP100137.1 Protein Homology CDS 2411176 2411982 . + 0 ID=cds-WP_017924211.1;Parent=gene-NIV78_RS27315;Dbxref=Genbank:WP_017924211.1;Name=WP_017924211.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733219.1;locus_tag=NIV78_RS27315;product=ATP-binding cassette domain-containing protein;protein_id=WP_017924211.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2412002 2413261 . + . ID=gene-NIV78_RS27320;Name=NIV78_RS27320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27320 NZ_CP100137.1 Protein Homology CDS 2412002 2413261 . + 0 ID=cds-WP_012733218.1;Parent=gene-NIV78_RS27320;Dbxref=Genbank:WP_012733218.1;Name=WP_012733218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689324.1;locus_tag=NIV78_RS27320;product=ABC transporter permease;protein_id=WP_012733218.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2413299 2414027 . + . ID=gene-NIV78_RS27325;Name=NIV78_RS27325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27325 NZ_CP100137.1 Protein Homology CDS 2413299 2414027 . + 0 ID=cds-WP_012733217.1;Parent=gene-NIV78_RS27325;Dbxref=Genbank:WP_012733217.1;Name=WP_012733217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014230117.1;locus_tag=NIV78_RS27325;product=SDR family oxidoreductase;protein_id=WP_012733217.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2414069 2415739 . + . ID=gene-NIV78_RS27330;Name=NIV78_RS27330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27330 NZ_CP100137.1 Protein Homology CDS 2414069 2415739 . + 0 ID=cds-WP_012733216.1;Parent=gene-NIV78_RS27330;Dbxref=Genbank:WP_012733216.1;Name=WP_012733216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689322.1;locus_tag=NIV78_RS27330;product=FGGY-family carbohydrate kinase;protein_id=WP_012733216.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2416022 2416780 . + . ID=gene-NIV78_RS27335;Name=NIV78_RS27335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27335 NZ_CP100137.1 Protein Homology CDS 2416022 2416780 . + 0 ID=cds-WP_100556570.1;Parent=gene-NIV78_RS27335;Dbxref=Genbank:WP_100556570.1;Name=WP_100556570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004529866.1;locus_tag=NIV78_RS27335;product=hypothetical protein;protein_id=WP_100556570.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2416928 2418127 . - . ID=gene-NIV78_RS27340;Name=NIV78_RS27340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27340 NZ_CP100137.1 Protein Homology CDS 2416928 2418127 . - 0 ID=cds-WP_251107647.1;Parent=gene-NIV78_RS27340;Dbxref=Genbank:WP_251107647.1;Name=WP_251107647.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733214.1;locus_tag=NIV78_RS27340;product=acyl-CoA dehydrogenase family protein;protein_id=WP_251107647.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2418124 2418408 . - . ID=gene-NIV78_RS27345;Name=NIV78_RS27345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27345 NZ_CP100137.1 GeneMarkS-2+ CDS 2418124 2418408 . - 0 ID=cds-WP_251107648.1;Parent=gene-NIV78_RS27345;Dbxref=Genbank:WP_251107648.1;Name=WP_251107648.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS27345;product=hypothetical protein;protein_id=WP_251107648.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2418519 2419448 . + . ID=gene-NIV78_RS27350;Name=NIV78_RS27350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27350 NZ_CP100137.1 Protein Homology CDS 2418519 2419448 . + 0 ID=cds-WP_051071197.1;Parent=gene-NIV78_RS27350;Dbxref=Genbank:WP_051071197.1;Name=WP_051071197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733213.1;locus_tag=NIV78_RS27350;product=spherulation-specific family 4 protein;protein_id=WP_051071197.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2419657 2421189 . - . ID=gene-NIV78_RS27355;Name=NIV78_RS27355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27355 NZ_CP100137.1 Protein Homology CDS 2419657 2421189 . - 0 ID=cds-WP_012733212.1;Parent=gene-NIV78_RS27355;Dbxref=Genbank:WP_012733212.1;Name=WP_012733212.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004529838.1;locus_tag=NIV78_RS27355;product=efflux transporter outer membrane subunit;protein_id=WP_012733212.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2421201 2424386 . - . ID=gene-NIV78_RS27360;Name=NIV78_RS27360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27360 NZ_CP100137.1 Protein Homology CDS 2421201 2424386 . - 0 ID=cds-WP_012733211.1;Parent=gene-NIV78_RS27360;Dbxref=Genbank:WP_012733211.1;Name=WP_012733211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_059641583.1;locus_tag=NIV78_RS27360;product=multidrug efflux RND transporter permease subunit;protein_id=WP_012733211.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2424433 2425647 . - . ID=gene-NIV78_RS27365;Name=NIV78_RS27365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27365 NZ_CP100137.1 Protein Homology CDS 2424433 2425647 . - 0 ID=cds-WP_161521767.1;Parent=gene-NIV78_RS27365;Dbxref=Genbank:WP_161521767.1;Name=WP_161521767.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424885.1;locus_tag=NIV78_RS27365;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_161521767.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2425680 2426531 . - . ID=gene-NIV78_RS27370;Name=NIV78_RS27370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27370 NZ_CP100137.1 Protein Homology CDS 2425680 2426531 . - 0 ID=cds-WP_017924069.1;Parent=gene-NIV78_RS27370;Dbxref=Genbank:WP_017924069.1;Name=WP_017924069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424884.1;locus_tag=NIV78_RS27370;product=alpha/beta hydrolase;protein_id=WP_017924069.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2426712 2427722 . + . ID=gene-NIV78_RS27375;Name=NIV78_RS27375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27375 NZ_CP100137.1 Protein Homology CDS 2426712 2427722 . + 0 ID=cds-WP_012733208.1;Parent=gene-NIV78_RS27375;Dbxref=Genbank:WP_012733208.1;Name=WP_012733208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484497.1;locus_tag=NIV78_RS27375;product=LysR family transcriptional regulator;protein_id=WP_012733208.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2428266 2428562 . + . ID=gene-NIV78_RS27380;Name=NIV78_RS27380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27380 NZ_CP100137.1 Protein Homology CDS 2428266 2428562 . + 0 ID=cds-WP_012733207.1;Parent=gene-NIV78_RS27380;Dbxref=Genbank:WP_012733207.1;Name=WP_012733207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424882.1;locus_tag=NIV78_RS27380;product=DUF4148 domain-containing protein;protein_id=WP_012733207.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2428644 2428877 . + . ID=gene-NIV78_RS27385;Name=NIV78_RS27385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27385 NZ_CP100137.1 GeneMarkS-2+ CDS 2428644 2428877 . + 0 ID=cds-WP_169511089.1;Parent=gene-NIV78_RS27385;Dbxref=Genbank:WP_169511089.1;Name=WP_169511089.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS27385;product=hypothetical protein;protein_id=WP_169511089.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2428966 2430030 . - . ID=gene-NIV78_RS27390;Name=NIV78_RS27390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27390 NZ_CP100137.1 Protein Homology CDS 2428966 2430030 . - 0 ID=cds-WP_012733206.1;Parent=gene-NIV78_RS27390;Dbxref=Genbank:WP_012733206.1;Name=WP_012733206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188476.1;locus_tag=NIV78_RS27390;product=purine nucleoside permease;protein_id=WP_012733206.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2430486 2431532 . - . ID=gene-NIV78_RS27395;Name=dmeF;gbkey=Gene;gene=dmeF;gene_biotype=protein_coding;locus_tag=NIV78_RS27395 NZ_CP100137.1 Protein Homology CDS 2430486 2431532 . - 0 ID=cds-WP_017923816.1;Parent=gene-NIV78_RS27395;Dbxref=Genbank:WP_017923816.1;Name=WP_017923816.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016021;gbkey=CDS;gene=dmeF;go_component=integral component of membrane|0016021||IEA;go_function=cation transmembrane transporter activity|0008324||IEA;go_process=cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733205.1;locus_tag=NIV78_RS27395;product=CDF family Co(II)/Ni(II) efflux transporter DmeF;protein_id=WP_017923816.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2431549 2431830 . - . ID=gene-NIV78_RS27400;Name=NIV78_RS27400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27400 NZ_CP100137.1 Protein Homology CDS 2431549 2431830 . - 0 ID=cds-WP_012733204.1;Parent=gene-NIV78_RS27400;Dbxref=Genbank:WP_012733204.1;Name=WP_012733204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548394.1;locus_tag=NIV78_RS27400;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=WP_012733204.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2431957 2433015 . - . ID=gene-NIV78_RS27405;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=NIV78_RS27405 NZ_CP100137.1 Protein Homology CDS 2431957 2433015 . - 0 ID=cds-WP_017424756.1;Parent=gene-NIV78_RS27405;Dbxref=Genbank:WP_017424756.1;Name=WP_017424756.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424756.1;locus_tag=NIV78_RS27405;product=selenide%2C water dikinase SelD;protein_id=WP_017424756.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2433233 2434069 . + . ID=gene-NIV78_RS27410;Name=NIV78_RS27410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27410 NZ_CP100137.1 Protein Homology CDS 2433233 2434069 . + 0 ID=cds-WP_012733202.1;Parent=gene-NIV78_RS27410;Dbxref=Genbank:WP_012733202.1;Name=WP_012733202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900986.1;locus_tag=NIV78_RS27410;product=DMT family transporter;protein_id=WP_012733202.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2434572 2436086 . + . ID=gene-NIV78_RS27415;Name=NIV78_RS27415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27415 NZ_CP100137.1 Protein Homology CDS 2434572 2436086 . + 0 ID=cds-WP_080942751.1;Parent=gene-NIV78_RS27415;Dbxref=Genbank:WP_080942751.1;Name=WP_080942751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018423706.1;locus_tag=NIV78_RS27415;product=AAA family ATPase;protein_id=WP_080942751.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2436121 2436483 . + . ID=gene-NIV78_RS27420;Name=NIV78_RS27420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27420 NZ_CP100137.1 Protein Homology CDS 2436121 2436483 . + 0 ID=cds-WP_012733201.1;Parent=gene-NIV78_RS27420;Dbxref=Genbank:WP_012733201.1;Name=WP_012733201.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733201.1;locus_tag=NIV78_RS27420;product=response regulator;protein_id=WP_012733201.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2437145 2438035 . + . ID=gene-NIV78_RS27425;Name=NIV78_RS27425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27425 NZ_CP100137.1 Protein Homology CDS 2437145 2438035 . + 0 ID=cds-WP_017923972.1;Parent=gene-NIV78_RS27425;Dbxref=Genbank:WP_017923972.1;Name=WP_017923972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733200.1;locus_tag=NIV78_RS27425;product=manganese catalase family protein;protein_id=WP_017923972.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2438085 2438603 . + . ID=gene-NIV78_RS27430;Name=NIV78_RS27430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27430 NZ_CP100137.1 Protein Homology CDS 2438085 2438603 . + 0 ID=cds-WP_012733199.1;Parent=gene-NIV78_RS27430;Dbxref=Genbank:WP_012733199.1;Name=WP_012733199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733199.1;locus_tag=NIV78_RS27430;product=ferritin-like domain-containing protein;protein_id=WP_012733199.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2438649 2439197 . - . ID=gene-NIV78_RS27435;Name=NIV78_RS27435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27435 NZ_CP100137.1 Protein Homology CDS 2438649 2439197 . - 0 ID=cds-WP_017425204.1;Parent=gene-NIV78_RS27435;Dbxref=Genbank:WP_017425204.1;Name=WP_017425204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425204.1;locus_tag=NIV78_RS27435;product=TIGR00645 family protein;protein_id=WP_017425204.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2439431 2441011 . - . ID=gene-NIV78_RS27440;Name=NIV78_RS27440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27440 NZ_CP100137.1 Protein Homology CDS 2439431 2441011 . - 0 ID=cds-WP_230674387.1;Parent=gene-NIV78_RS27440;Dbxref=Genbank:WP_230674387.1;Name=WP_230674387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689300.1;locus_tag=NIV78_RS27440;product=PLP-dependent aminotransferase family protein;protein_id=WP_230674387.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2441153 2442436 . + . ID=gene-NIV78_RS27445;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;locus_tag=NIV78_RS27445 NZ_CP100137.1 Protein Homology CDS 2441153 2442436 . + 0 ID=cds-WP_017923791.1;Parent=gene-NIV78_RS27445;Dbxref=Genbank:WP_017923791.1;Name=WP_017923791.1;Ontology_term=GO:0009450,GO:0003867;gbkey=CDS;gene=gabT;go_function=4-aminobutyrate transaminase activity|0003867||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603826.1;locus_tag=NIV78_RS27445;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_017923791.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2442525 2443991 . + . ID=gene-NIV78_RS27450;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=NIV78_RS27450 NZ_CP100137.1 Protein Homology CDS 2442525 2443991 . + 0 ID=cds-WP_012733195.1;Parent=gene-NIV78_RS27450;Dbxref=Genbank:WP_012733195.1;Name=WP_012733195.1;Ontology_term=GO:0009450,GO:0009013;gbkey=CDS;gene=gabD;go_function=succinate-semialdehyde dehydrogenase [NAD(P)+] activity|0009013||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009894094.1;locus_tag=NIV78_RS27450;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_012733195.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2444154 2445698 . - . ID=gene-NIV78_RS27455;Name=NIV78_RS27455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27455 NZ_CP100137.1 Protein Homology CDS 2444154 2445698 . - 0 ID=cds-WP_012733194.1;Parent=gene-NIV78_RS27455;Dbxref=Genbank:WP_012733194.1;Name=WP_012733194.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659670.1;locus_tag=NIV78_RS27455;product=PAS domain-containing methyl-accepting chemotaxis protein;protein_id=WP_012733194.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2446157 2447359 . - . ID=gene-NIV78_RS27460;Name=pcaF;gbkey=Gene;gene=pcaF;gene_biotype=protein_coding;locus_tag=NIV78_RS27460 NZ_CP100137.1 Protein Homology CDS 2446157 2447359 . - 0 ID=cds-WP_017424197.1;Parent=gene-NIV78_RS27460;Dbxref=Genbank:WP_017424197.1;Name=WP_017424197.1;Ontology_term=GO:0019619,GO:0016747;gbkey=CDS;gene=pcaF;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=3%2C4-dihydroxybenzoate catabolic process|0019619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197326.1;locus_tag=NIV78_RS27460;product=3-oxoadipyl-CoA thiolase;protein_id=WP_017424197.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2447600 2448388 . + . ID=gene-NIV78_RS27465;Name=NIV78_RS27465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27465 NZ_CP100137.1 Protein Homology CDS 2447600 2448388 . + 0 ID=cds-WP_012733192.1;Parent=gene-NIV78_RS27465;Dbxref=Genbank:WP_012733192.1;Name=WP_012733192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010107642.1;locus_tag=NIV78_RS27465;product=IclR family transcriptional regulator;protein_id=WP_012733192.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2448588 2449160 . + . ID=gene-NIV78_RS27470;Name=NIV78_RS27470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27470 NZ_CP100137.1 Protein Homology CDS 2448588 2449160 . + 0 ID=cds-WP_257757580.1;Parent=gene-NIV78_RS27470;Dbxref=Genbank:WP_257757580.1;Name=WP_257757580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328972.1;locus_tag=NIV78_RS27470;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_257757580.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2449177 2449494 . + . ID=gene-NIV78_RS27475;Name=NIV78_RS27475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27475 NZ_CP100137.1 Protein Homology CDS 2449177 2449494 . + 0 ID=cds-WP_017424955.1;Parent=gene-NIV78_RS27475;Dbxref=Genbank:WP_017424955.1;Name=WP_017424955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733190.1;locus_tag=NIV78_RS27475;product=hypothetical protein;protein_id=WP_017424955.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2449491 2449787 . + . ID=gene-NIV78_RS27480;Name=NIV78_RS27480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27480 NZ_CP100137.1 Protein Homology CDS 2449491 2449787 . + 0 ID=cds-WP_017424954.1;Parent=gene-NIV78_RS27480;Dbxref=Genbank:WP_017424954.1;Name=WP_017424954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424954.1;locus_tag=NIV78_RS27480;product=4Fe-4S binding protein;protein_id=WP_017424954.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2449818 2450066 . + . ID=gene-NIV78_RS27485;Name=NIV78_RS27485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27485 NZ_CP100137.1 Protein Homology CDS 2449818 2450066 . + 0 ID=cds-WP_017424953.1;Parent=gene-NIV78_RS27485;Dbxref=Genbank:WP_017424953.1;Name=WP_017424953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733188.1;locus_tag=NIV78_RS27485;product=hypothetical protein;protein_id=WP_017424953.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2450158 2451924 . + . ID=gene-NIV78_RS27490;Name=NIV78_RS27490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27490 NZ_CP100137.1 Protein Homology CDS 2450158 2451924 . + 0 ID=cds-WP_017923069.1;Parent=gene-NIV78_RS27490;Dbxref=Genbank:WP_017923069.1;Name=WP_017923069.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733187.1;locus_tag=NIV78_RS27490;product=ABC transporter transmembrane domain-containing protein;protein_id=WP_017923069.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2452240 2453187 . + . ID=gene-NIV78_RS27495;Name=NIV78_RS27495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27495 NZ_CP100137.1 Protein Homology CDS 2452240 2453187 . + 0 ID=cds-WP_012733186.1;Parent=gene-NIV78_RS27495;Dbxref=Genbank:WP_012733186.1;Name=WP_012733186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733186.1;locus_tag=NIV78_RS27495;product=hypothetical protein;protein_id=WP_012733186.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2453669 2454769 . - . ID=gene-NIV78_RS27500;Name=NIV78_RS27500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27500 NZ_CP100137.1 Protein Homology CDS 2453669 2454769 . - 0 ID=cds-WP_012733185.1;Parent=gene-NIV78_RS27500;Dbxref=Genbank:WP_012733185.1;Name=WP_012733185.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733185.1;locus_tag=NIV78_RS27500;product=branched-chain amino acid aminotransferase;protein_id=WP_012733185.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2455201 2456091 . - . ID=gene-NIV78_RS27505;Name=NIV78_RS27505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27505 NZ_CP100137.1 Protein Homology CDS 2455201 2456091 . - 0 ID=cds-WP_017924883.1;Parent=gene-NIV78_RS27505;Dbxref=Genbank:WP_017924883.1;Name=WP_017924883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733184.1;locus_tag=NIV78_RS27505;product=aldo/keto reductase family oxidoreductase;protein_id=WP_017924883.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2456186 2457133 . + . ID=gene-NIV78_RS27510;Name=NIV78_RS27510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27510 NZ_CP100137.1 Protein Homology CDS 2456186 2457133 . + 0 ID=cds-WP_251107651.1;Parent=gene-NIV78_RS27510;Dbxref=Genbank:WP_251107651.1;Name=WP_251107651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733183.1;locus_tag=NIV78_RS27510;product=LysR substrate-binding domain-containing protein;protein_id=WP_251107651.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2457306 2458568 . - . ID=gene-NIV78_RS27515;Name=NIV78_RS27515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27515 NZ_CP100137.1 Protein Homology CDS 2457306 2458568 . - 0 ID=cds-WP_161521762.1;Parent=gene-NIV78_RS27515;Dbxref=Genbank:WP_161521762.1;Name=WP_161521762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733182.1;locus_tag=NIV78_RS27515;product=serine hydroxymethyltransferase;protein_id=WP_161521762.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2458899 2459873 . - . ID=gene-NIV78_RS27520;Name=NIV78_RS27520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27520 NZ_CP100137.1 Protein Homology CDS 2458899 2459873 . - 0 ID=cds-WP_251107653.1;Parent=gene-NIV78_RS27520;Dbxref=Genbank:WP_251107653.1;Name=WP_251107653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424669.1;locus_tag=NIV78_RS27520;product=XdhC family protein;protein_id=WP_251107653.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2459873 2461189 . - . ID=gene-NIV78_RS27525;Name=NIV78_RS27525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27525 NZ_CP100137.1 Protein Homology CDS 2459873 2461189 . - 0 ID=cds-WP_017424670.1;Parent=gene-NIV78_RS27525;Dbxref=Genbank:WP_017424670.1;Name=WP_017424670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424670.1;locus_tag=NIV78_RS27525;product=cytochrome c;protein_id=WP_017424670.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2461186 2463426 . - . ID=gene-NIV78_RS27530;Name=NIV78_RS27530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27530 NZ_CP100137.1 Protein Homology CDS 2461186 2463426 . - 0 ID=cds-WP_012733179.1;Parent=gene-NIV78_RS27530;Dbxref=Genbank:WP_012733179.1;Name=WP_012733179.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899380.1;locus_tag=NIV78_RS27530;product=molybdopterin-dependent oxidoreductase;protein_id=WP_012733179.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2463429 2463884 . - . ID=gene-NIV78_RS27535;Name=NIV78_RS27535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27535 NZ_CP100137.1 Protein Homology CDS 2463429 2463884 . - 0 ID=cds-WP_012733178.1;Parent=gene-NIV78_RS27535;Dbxref=Genbank:WP_012733178.1;Name=WP_012733178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329294.1;locus_tag=NIV78_RS27535;product=(2Fe-2S)-binding protein;protein_id=WP_012733178.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2463936 2464337 . + . ID=gene-NIV78_RS27540;Name=NIV78_RS27540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27540 NZ_CP100137.1 GeneMarkS-2+ CDS 2463936 2464337 . + 0 ID=cds-WP_017924071.1;Parent=gene-NIV78_RS27540;Dbxref=Genbank:WP_017924071.1;Name=WP_017924071.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS27540;product=hypothetical protein;protein_id=WP_017924071.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2464765 2465208 . + . ID=gene-NIV78_RS27545;Name=NIV78_RS27545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27545 NZ_CP100137.1 Protein Homology CDS 2464765 2465208 . + 0 ID=cds-WP_017924072.1;Parent=gene-NIV78_RS27545;Dbxref=Genbank:WP_017924072.1;Name=WP_017924072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733177.1;locus_tag=NIV78_RS27545;product=hypothetical protein;protein_id=WP_017924072.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2465201 2466517 . + . ID=gene-NIV78_RS27550;Name=NIV78_RS27550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27550 NZ_CP100137.1 Protein Homology CDS 2465201 2466517 . + 0 ID=cds-WP_012733176.1;Parent=gene-NIV78_RS27550;Dbxref=Genbank:WP_012733176.1;Name=WP_012733176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425064.1;locus_tag=NIV78_RS27550;product=sorbosone dehydrogenase family protein;protein_id=WP_012733176.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2466626 2466739 . - . ID=gene-NIV78_RS27555;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=NIV78_RS27555 NZ_CP100137.1 cmsearch rRNA 2466626 2466739 . - . ID=rna-NIV78_RS27555;Parent=gene-NIV78_RS27555;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS27555;product=5S ribosomal RNA NZ_CP100137.1 cmsearch exon 2466626 2466739 . - . ID=exon-NIV78_RS27555-1;Parent=rna-NIV78_RS27555;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS27555;product=5S ribosomal RNA NZ_CP100137.1 RefSeq gene 2466879 2469759 . - . ID=gene-NIV78_RS27560;Name=NIV78_RS27560;gbkey=Gene;gene_biotype=rRNA;locus_tag=NIV78_RS27560 NZ_CP100137.1 cmsearch rRNA 2466879 2469759 . - . ID=rna-NIV78_RS27560;Parent=gene-NIV78_RS27560;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS27560;product=23S ribosomal RNA NZ_CP100137.1 cmsearch exon 2466879 2469759 . - . ID=exon-NIV78_RS27560-1;Parent=rna-NIV78_RS27560;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS27560;product=23S ribosomal RNA NZ_CP100137.1 RefSeq gene 2470064 2470139 . - . ID=gene-NIV78_RS27565;Name=NIV78_RS27565;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS27565 NZ_CP100137.1 tRNAscan-SE tRNA 2470064 2470139 . - . ID=rna-NIV78_RS27565;Parent=gene-NIV78_RS27565;anticodon=(pos:complement(2470104..2470106));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS27565;product=tRNA-Ala NZ_CP100137.1 tRNAscan-SE exon 2470064 2470139 . - . ID=exon-NIV78_RS27565-1;Parent=rna-NIV78_RS27565;anticodon=(pos:complement(2470104..2470106));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS27565;product=tRNA-Ala NZ_CP100137.1 RefSeq gene 2470180 2470256 . - . ID=gene-NIV78_RS27570;Name=NIV78_RS27570;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS27570 NZ_CP100137.1 tRNAscan-SE tRNA 2470180 2470256 . - . ID=rna-NIV78_RS27570;Parent=gene-NIV78_RS27570;anticodon=(pos:complement(2470220..2470222));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS27570;product=tRNA-Ile NZ_CP100137.1 tRNAscan-SE exon 2470180 2470256 . - . ID=exon-NIV78_RS27570-1;Parent=rna-NIV78_RS27570;anticodon=(pos:complement(2470220..2470222));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS27570;product=tRNA-Ile NZ_CP100137.1 RefSeq gene 2470321 2471853 . - . ID=gene-NIV78_RS27575;Name=NIV78_RS27575;gbkey=Gene;gene_biotype=rRNA;locus_tag=NIV78_RS27575 NZ_CP100137.1 cmsearch rRNA 2470321 2471853 . - . ID=rna-NIV78_RS27575;Parent=gene-NIV78_RS27575;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS27575;product=16S ribosomal RNA NZ_CP100137.1 cmsearch exon 2470321 2471853 . - . ID=exon-NIV78_RS27575-1;Parent=rna-NIV78_RS27575;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS27575;product=16S ribosomal RNA NZ_CP100137.1 RefSeq gene 2472530 2474248 . - . ID=gene-NIV78_RS27580;Name=NIV78_RS27580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27580 NZ_CP100137.1 Protein Homology CDS 2472530 2474248 . - 0 ID=cds-WP_251107655.1;Parent=gene-NIV78_RS27580;Dbxref=Genbank:WP_251107655.1;Name=WP_251107655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733175.1;locus_tag=NIV78_RS27580;product=peptidase S10;protein_id=WP_251107655.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2474517 2475803 . - . ID=gene-NIV78_RS27585;Name=NIV78_RS27585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27585 NZ_CP100137.1 Protein Homology CDS 2474517 2475803 . - 0 ID=cds-WP_251107656.1;Parent=gene-NIV78_RS27585;Dbxref=Genbank:WP_251107656.1;Name=WP_251107656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733174.1;locus_tag=NIV78_RS27585;product=MFS transporter;protein_id=WP_251107656.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2475906 2476898 . + . ID=gene-NIV78_RS27590;Name=NIV78_RS27590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27590 NZ_CP100137.1 Protein Homology CDS 2475906 2476898 . + 0 ID=cds-WP_012733173.1;Parent=gene-NIV78_RS27590;Dbxref=Genbank:WP_012733173.1;Name=WP_012733173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423546.1;locus_tag=NIV78_RS27590;product=LysR family transcriptional regulator;protein_id=WP_012733173.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2477020 2477694 . - . ID=gene-NIV78_RS27595;Name=NIV78_RS27595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27595 NZ_CP100137.1 Protein Homology CDS 2477020 2477694 . - 0 ID=cds-WP_035978144.1;Parent=gene-NIV78_RS27595;Dbxref=Genbank:WP_035978144.1;Name=WP_035978144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423547.1;locus_tag=NIV78_RS27595;product=phospholipase;protein_id=WP_035978144.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2477922 2479127 . + . ID=gene-NIV78_RS27600;Name=NIV78_RS27600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27600 NZ_CP100137.1 Protein Homology CDS 2477922 2479127 . + 0 ID=cds-WP_124837201.1;Parent=gene-NIV78_RS27600;Dbxref=Genbank:WP_124837201.1;Name=WP_124837201.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733171.1;locus_tag=NIV78_RS27600;product=AAA family ATPase;protein_id=WP_124837201.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2479124 2481187 . + . ID=gene-NIV78_RS27605;Name=NIV78_RS27605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27605 NZ_CP100137.1 Protein Homology CDS 2479124 2481187 . + 0 ID=cds-WP_257757587.1;Parent=gene-NIV78_RS27605;Dbxref=Genbank:WP_257757587.1;Name=WP_257757587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689266.1;locus_tag=NIV78_RS27605;product=cobalamin biosynthesis protein CobT;protein_id=WP_257757587.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2481273 2481569 . + . ID=gene-NIV78_RS27610;Name=NIV78_RS27610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27610 NZ_CP100137.1 Protein Homology CDS 2481273 2481569 . + 0 ID=cds-WP_035977351.1;Parent=gene-NIV78_RS27610;Dbxref=Genbank:WP_035977351.1;Name=WP_035977351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733169.1;locus_tag=NIV78_RS27610;product=hypothetical protein;protein_id=WP_035977351.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2481703 2482572 . - . ID=gene-NIV78_RS27615;Name=NIV78_RS27615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27615 NZ_CP100137.1 Protein Homology CDS 2481703 2482572 . - 0 ID=cds-WP_017924105.1;Parent=gene-NIV78_RS27615;Dbxref=Genbank:WP_017924105.1;Name=WP_017924105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733168.1;locus_tag=NIV78_RS27615;product=alpha/beta hydrolase;protein_id=WP_017924105.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 2483074 2483533 . - . ID=gene-NIV78_RS27620;Name=NIV78_RS27620;end_range=2483533,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS27620;partial=true;pseudo=true;start_range=.,2483074 NZ_CP100137.1 Protein Homology CDS 2483074 2483533 . - 0 ID=cds-NIV78_RS27620;Parent=gene-NIV78_RS27620;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0009060,GO:0004129,GO:0020037,GO:0016021;end_range=2483533,.;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=cytochrome-c oxidase activity|0004129||IEA,heme binding|0020037||IEA;go_process=aerobic respiration|0009060||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010926118.1;locus_tag=NIV78_RS27620;partial=true;product=cbb3-type cytochrome c oxidase subunit I;pseudo=true;start_range=.,2483074;transl_table=11 NZ_CP100137.1 RefSeq gene 2483548 2483688 . - . ID=gene-NIV78_RS27625;Name=NIV78_RS27625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27625 NZ_CP100137.1 GeneMarkS-2+ CDS 2483548 2483688 . - 0 ID=cds-WP_173941266.1;Parent=gene-NIV78_RS27625;Dbxref=Genbank:WP_173941266.1;Name=WP_173941266.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS27625;product=hypothetical protein;protein_id=WP_173941266.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2483773 2483922 . + . ID=gene-NIV78_RS27630;Name=NIV78_RS27630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27630 NZ_CP100137.1 GeneMarkS-2+ CDS 2483773 2483922 . + 0 ID=cds-WP_017924106.1;Parent=gene-NIV78_RS27630;Dbxref=Genbank:WP_017924106.1;Name=WP_017924106.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS27630;product=hypothetical protein;protein_id=WP_017924106.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2484122 2484685 . - . ID=gene-NIV78_RS27635;Name=NIV78_RS27635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27635 NZ_CP100137.1 Protein Homology CDS 2484122 2484685 . - 0 ID=cds-WP_012733167.1;Parent=gene-NIV78_RS27635;Dbxref=Genbank:WP_012733167.1;Name=WP_012733167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733167.1;locus_tag=NIV78_RS27635;product=hypothetical protein;protein_id=WP_012733167.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2484674 2485039 . + . ID=gene-NIV78_RS27640;Name=NIV78_RS27640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27640 NZ_CP100137.1 GeneMarkS-2+ CDS 2484674 2485039 . + 0 ID=cds-WP_157384216.1;Parent=gene-NIV78_RS27640;Dbxref=Genbank:WP_157384216.1;Name=WP_157384216.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS27640;product=hypothetical protein;protein_id=WP_157384216.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2485082 2486206 . + . ID=gene-NIV78_RS27645;Name=NIV78_RS27645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27645 NZ_CP100137.1 Protein Homology CDS 2485082 2486206 . + 0 ID=cds-WP_017924441.1;Parent=gene-NIV78_RS27645;Dbxref=Genbank:WP_017924441.1;Name=WP_017924441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733166.1;locus_tag=NIV78_RS27645;product=aromatic ring-hydroxylating dioxygenase subunit alpha;protein_id=WP_017924441.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2486350 2487414 . - . ID=gene-NIV78_RS27650;Name=NIV78_RS27650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27650 NZ_CP100137.1 Protein Homology CDS 2486350 2487414 . - 0 ID=cds-WP_251118944.1;Parent=gene-NIV78_RS27650;Dbxref=Genbank:WP_251118944.1;Name=WP_251118944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733165.1;locus_tag=NIV78_RS27650;product=homoserine dehydrogenase;protein_id=WP_251118944.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2487411 2487845 . - . ID=gene-NIV78_RS27655;Name=NIV78_RS27655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27655 NZ_CP100137.1 Protein Homology CDS 2487411 2487845 . - 0 ID=cds-WP_017923302.1;Parent=gene-NIV78_RS27655;Dbxref=Genbank:WP_017923302.1;Name=WP_017923302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733164.1;locus_tag=NIV78_RS27655;product=VOC family protein;protein_id=WP_017923302.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2487981 2489513 . - . ID=gene-NIV78_RS27660;Name=NIV78_RS27660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27660 NZ_CP100137.1 Protein Homology CDS 2487981 2489513 . - 0 ID=cds-WP_017923301.1;Parent=gene-NIV78_RS27660;Dbxref=Genbank:WP_017923301.1;Name=WP_017923301.1;Ontology_term=GO:0006520,GO:0047689;gbkey=CDS;go_function=aspartate racemase activity|0047689||IEA;go_process=cellular amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020379712.1;locus_tag=NIV78_RS27660;product=amino acid racemase;protein_id=WP_017923301.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2489510 2490796 . - . ID=gene-NIV78_RS27665;Name=NIV78_RS27665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27665 NZ_CP100137.1 Protein Homology CDS 2489510 2490796 . - 0 ID=cds-WP_012733162.1;Parent=gene-NIV78_RS27665;Dbxref=Genbank:WP_012733162.1;Name=WP_012733162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733162.1;locus_tag=NIV78_RS27665;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_012733162.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2491221 2492987 . - . ID=gene-NIV78_RS27670;Name=NIV78_RS27670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27670 NZ_CP100137.1 Protein Homology CDS 2491221 2492987 . - 0 ID=cds-WP_043225854.1;Parent=gene-NIV78_RS27670;Dbxref=Genbank:WP_043225854.1;Name=WP_043225854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020379711.1;locus_tag=NIV78_RS27670;product=hypothetical protein;protein_id=WP_043225854.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2493608 2493739 . - . ID=gene-NIV78_RS27675;Name=NIV78_RS27675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27675 NZ_CP100137.1 GeneMarkS-2+ CDS 2493608 2493739 . - 0 ID=cds-WP_254985917.1;Parent=gene-NIV78_RS27675;Dbxref=Genbank:WP_254985917.1;Name=WP_254985917.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS27675;product=hypothetical protein;protein_id=WP_254985917.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2494023 2494967 . - . ID=gene-NIV78_RS27680;Name=NIV78_RS27680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27680 NZ_CP100137.1 Protein Homology CDS 2494023 2494967 . - 0 ID=cds-WP_012733160.1;Parent=gene-NIV78_RS27680;Dbxref=Genbank:WP_012733160.1;Name=WP_012733160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689189.1;locus_tag=NIV78_RS27680;product=SDR family oxidoreductase;protein_id=WP_012733160.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2495238 2495816 . + . ID=gene-NIV78_RS27685;Name=NIV78_RS27685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27685 NZ_CP100137.1 Protein Homology CDS 2495238 2495816 . + 0 ID=cds-WP_251107659.1;Parent=gene-NIV78_RS27685;Dbxref=Genbank:WP_251107659.1;Name=WP_251107659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493132.1;locus_tag=NIV78_RS27685;product=DUF2760 domain-containing protein;protein_id=WP_251107659.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2495813 2497660 . + . ID=gene-NIV78_RS27690;Name=NIV78_RS27690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27690 NZ_CP100137.1 Protein Homology CDS 2495813 2497660 . + 0 ID=cds-WP_251107660.1;Parent=gene-NIV78_RS27690;Dbxref=Genbank:WP_251107660.1;Name=WP_251107660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004528300.1;locus_tag=NIV78_RS27690;product=Hsp70 family protein;protein_id=WP_251107660.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2497660 2500578 . + . ID=gene-NIV78_RS27695;Name=NIV78_RS27695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27695 NZ_CP100137.1 Protein Homology CDS 2497660 2500578 . + 0 ID=cds-WP_251107661.1;Parent=gene-NIV78_RS27695;Dbxref=Genbank:WP_251107661.1;Name=WP_251107661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733157.1;locus_tag=NIV78_RS27695;product=Hsp70 family protein;protein_id=WP_251107661.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2500794 2501522 . + . ID=gene-NIV78_RS27700;Name=NIV78_RS27700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27700 NZ_CP100137.1 Protein Homology CDS 2500794 2501522 . + 0 ID=cds-WP_017924422.1;Parent=gene-NIV78_RS27700;Dbxref=Genbank:WP_017924422.1;Name=WP_017924422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004528684.1;locus_tag=NIV78_RS27700;product=glutathione S-transferase;protein_id=WP_017924422.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2501641 2502084 . + . ID=gene-NIV78_RS27705;Name=NIV78_RS27705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27705 NZ_CP100137.1 Protein Homology CDS 2501641 2502084 . + 0 ID=cds-WP_012733155.1;Parent=gene-NIV78_RS27705;Dbxref=Genbank:WP_012733155.1;Name=WP_012733155.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733155.1;locus_tag=NIV78_RS27705;product=MarR family transcriptional regulator;protein_id=WP_012733155.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2502222 2502785 . + . ID=gene-NIV78_RS27710;Name=NIV78_RS27710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27710 NZ_CP100137.1 Protein Homology CDS 2502222 2502785 . + 0 ID=cds-WP_012733154.1;Parent=gene-NIV78_RS27710;Dbxref=Genbank:WP_012733154.1;Name=WP_012733154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396870.1;locus_tag=NIV78_RS27710;product=isochorismatase family protein;protein_id=WP_012733154.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2503013 2503705 . + . ID=gene-NIV78_RS27715;Name=NIV78_RS27715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27715 NZ_CP100137.1 Protein Homology CDS 2503013 2503705 . + 0 ID=cds-WP_012733153.1;Parent=gene-NIV78_RS27715;Dbxref=Genbank:WP_012733153.1;Name=WP_012733153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733153.1;locus_tag=NIV78_RS27715;product=alpha/beta hydrolase;protein_id=WP_012733153.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2503945 2505129 . + . ID=gene-NIV78_RS27720;Name=NIV78_RS27720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27720 NZ_CP100137.1 Protein Homology CDS 2503945 2505129 . + 0 ID=cds-WP_217908391.1;Parent=gene-NIV78_RS27720;Dbxref=Genbank:WP_217908391.1;Name=WP_217908391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733152.1;locus_tag=NIV78_RS27720;product=hypothetical protein;protein_id=WP_217908391.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2505166 2505645 . - . ID=gene-NIV78_RS27725;Name=NIV78_RS27725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27725 NZ_CP100137.1 Protein Homology CDS 2505166 2505645 . - 0 ID=cds-WP_017924092.1;Parent=gene-NIV78_RS27725;Dbxref=Genbank:WP_017924092.1;Name=WP_017924092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733151.1;locus_tag=NIV78_RS27725;product=ASCH domain-containing protein;protein_id=WP_017924092.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2505673 2506866 . - . ID=gene-NIV78_RS27730;Name=NIV78_RS27730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27730 NZ_CP100137.1 Protein Homology CDS 2505673 2506866 . - 0 ID=cds-WP_017924091.1;Parent=gene-NIV78_RS27730;Dbxref=Genbank:WP_017924091.1;Name=WP_017924091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733150.1;locus_tag=NIV78_RS27730;product=GGDEF domain-containing protein;protein_id=WP_017924091.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2507166 2509196 . - . ID=gene-NIV78_RS27735;Name=shc;gbkey=Gene;gene=shc;gene_biotype=protein_coding;locus_tag=NIV78_RS27735 NZ_CP100137.1 Protein Homology CDS 2507166 2509196 . - 0 ID=cds-WP_012733149.1;Parent=gene-NIV78_RS27735;Dbxref=Genbank:WP_012733149.1;Name=WP_012733149.1;Ontology_term=GO:0019746,GO:0051007;gbkey=CDS;gene=shc;go_function=squalene-hopene cyclase activity|0051007||IEA;go_process=hopanoid biosynthetic process|0019746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733149.1;locus_tag=NIV78_RS27735;product=squalene--hopene cyclase;protein_id=WP_012733149.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2509250 2509957 . + . ID=gene-NIV78_RS27740;Name=NIV78_RS27740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27740 NZ_CP100137.1 Protein Homology CDS 2509250 2509957 . + 0 ID=cds-WP_012733148.1;Parent=gene-NIV78_RS27740;Dbxref=Genbank:WP_012733148.1;Name=WP_012733148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733148.1;locus_tag=NIV78_RS27740;product=TetR/AcrR family transcriptional regulator;protein_id=WP_012733148.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2510069 2510746 . + . ID=gene-NIV78_RS27745;Name=NIV78_RS27745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27745 NZ_CP100137.1 Protein Homology CDS 2510069 2510746 . + 0 ID=cds-WP_012733147.1;Parent=gene-NIV78_RS27745;Dbxref=Genbank:WP_012733147.1;Name=WP_012733147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733147.1;locus_tag=NIV78_RS27745;product=GntR family transcriptional regulator;protein_id=WP_012733147.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2510886 2511833 . - . ID=gene-NIV78_RS27750;Name=NIV78_RS27750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27750 NZ_CP100137.1 Protein Homology CDS 2510886 2511833 . - 0 ID=cds-WP_017424006.1;Parent=gene-NIV78_RS27750;Dbxref=Genbank:WP_017424006.1;Name=WP_017424006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733146.1;locus_tag=NIV78_RS27750;product=dihydrodipicolinate synthase family protein;protein_id=WP_017424006.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2512105 2512797 . + . ID=gene-NIV78_RS27755;Name=NIV78_RS27755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27755 NZ_CP100137.1 Protein Homology CDS 2512105 2512797 . + 0 ID=cds-WP_012733145.1;Parent=gene-NIV78_RS27755;Dbxref=Genbank:WP_012733145.1;Name=WP_012733145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733145.1;locus_tag=NIV78_RS27755;product=HAD family phosphatase;protein_id=WP_012733145.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2512896 2513828 . - . ID=gene-NIV78_RS27760;Name=NIV78_RS27760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27760 NZ_CP100137.1 Protein Homology CDS 2512896 2513828 . - 0 ID=cds-WP_257441734.1;Parent=gene-NIV78_RS27760;Dbxref=Genbank:WP_257441734.1;Name=WP_257441734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424007.1;locus_tag=NIV78_RS27760;product=NAD(P)-dependent oxidoreductase;protein_id=WP_257441734.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2513984 2515333 . - . ID=gene-NIV78_RS27765;Name=NIV78_RS27765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27765 NZ_CP100137.1 Protein Homology CDS 2513984 2515333 . - 0 ID=cds-WP_017924024.1;Parent=gene-NIV78_RS27765;Dbxref=Genbank:WP_017924024.1;Name=WP_017924024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006028265.1;locus_tag=NIV78_RS27765;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_017924024.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2515515 2515970 . - . ID=gene-NIV78_RS27770;Name=NIV78_RS27770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27770 NZ_CP100137.1 Protein Homology CDS 2515515 2515970 . - 0 ID=cds-WP_254225529.1;Parent=gene-NIV78_RS27770;Dbxref=Genbank:WP_254225529.1;Name=WP_254225529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010110770.1;locus_tag=NIV78_RS27770;product=flavin reductase;protein_id=WP_254225529.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2516164 2516769 . - . ID=gene-NIV78_RS27775;Name=NIV78_RS27775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27775 NZ_CP100137.1 Protein Homology CDS 2516164 2516769 . - 0 ID=cds-WP_017922951.1;Parent=gene-NIV78_RS27775;Dbxref=Genbank:WP_017922951.1;Name=WP_017922951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689127.1;locus_tag=NIV78_RS27775;product=LysE family translocator;protein_id=WP_017922951.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2516833 2517225 . - . ID=gene-NIV78_RS27780;Name=NIV78_RS27780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27780 NZ_CP100137.1 Protein Homology CDS 2516833 2517225 . - 0 ID=cds-WP_012733140.1;Parent=gene-NIV78_RS27780;Dbxref=Genbank:WP_012733140.1;Name=WP_012733140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423954.1;locus_tag=NIV78_RS27780;product=cupin domain-containing protein;protein_id=WP_012733140.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2517281 2518327 . - . ID=gene-NIV78_RS27785;Name=dmpG;gbkey=Gene;gene=dmpG;gene_biotype=protein_coding;locus_tag=NIV78_RS27785 NZ_CP100137.1 Protein Homology CDS 2517281 2518327 . - 0 ID=cds-WP_012733139.1;Parent=gene-NIV78_RS27785;Dbxref=Genbank:WP_012733139.1;Name=WP_012733139.1;Ontology_term=GO:0008701;gbkey=CDS;gene=dmpG;go_function=4-hydroxy-2-oxovalerate aldolase activity|0008701||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733139.1;locus_tag=NIV78_RS27785;product=4-hydroxy-2-oxovalerate aldolase;protein_id=WP_012733139.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2518324 2519253 . - . ID=gene-NIV78_RS27790;Name=NIV78_RS27790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27790 NZ_CP100137.1 Protein Homology CDS 2518324 2519253 . - 0 ID=cds-WP_012733138.1;Parent=gene-NIV78_RS27790;Dbxref=Genbank:WP_012733138.1;Name=WP_012733138.1;Ontology_term=GO:0008774;gbkey=CDS;go_function=acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733138.1;locus_tag=NIV78_RS27790;product=acetaldehyde dehydrogenase (acetylating);protein_id=WP_012733138.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2519250 2520077 . - . ID=gene-NIV78_RS27795;Name=NIV78_RS27795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27795 NZ_CP100137.1 Protein Homology CDS 2519250 2520077 . - 0 ID=cds-WP_251107663.1;Parent=gene-NIV78_RS27795;Dbxref=Genbank:WP_251107663.1;Name=WP_251107663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423952.1;locus_tag=NIV78_RS27795;product=alpha/beta fold hydrolase;protein_id=WP_251107663.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2520074 2521024 . - . ID=gene-NIV78_RS27800;Name=NIV78_RS27800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27800 NZ_CP100137.1 Protein Homology CDS 2520074 2521024 . - 0 ID=cds-WP_257757595.1;Parent=gene-NIV78_RS27800;Dbxref=Genbank:WP_257757595.1;Name=WP_257757595.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004529067.1;locus_tag=NIV78_RS27800;product=branched-chain amino acid transaminase;protein_id=WP_257757595.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2521039 2521722 . - . ID=gene-NIV78_RS27805;Name=NIV78_RS27805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27805 NZ_CP100137.1 Protein Homology CDS 2521039 2521722 . - 0 ID=cds-WP_017922953.1;Parent=gene-NIV78_RS27805;Dbxref=Genbank:WP_017922953.1;Name=WP_017922953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027931.1;locus_tag=NIV78_RS27805;product=transferase;protein_id=WP_017922953.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2521738 2522526 . - . ID=gene-NIV78_RS27810;Name=NIV78_RS27810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27810 NZ_CP100137.1 Protein Homology CDS 2521738 2522526 . - 0 ID=cds-WP_012733134.1;Parent=gene-NIV78_RS27810;Dbxref=Genbank:WP_012733134.1;Name=WP_012733134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733134.1;locus_tag=NIV78_RS27810;product=alpha/beta fold hydrolase;protein_id=WP_012733134.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2522530 2523438 . - . ID=gene-NIV78_RS27815;Name=NIV78_RS27815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27815 NZ_CP100137.1 Protein Homology CDS 2522530 2523438 . - 0 ID=cds-WP_017922955.1;Parent=gene-NIV78_RS27815;Dbxref=Genbank:WP_017922955.1;Name=WP_017922955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689119.1;locus_tag=NIV78_RS27815;product=chlorinating enzyme;protein_id=WP_017922955.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2523573 2523833 . - . ID=gene-NIV78_RS27820;Name=NIV78_RS27820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27820 NZ_CP100137.1 Protein Homology CDS 2523573 2523833 . - 0 ID=cds-WP_012733132.1;Parent=gene-NIV78_RS27820;Dbxref=Genbank:WP_012733132.1;Name=WP_012733132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733132.1;locus_tag=NIV78_RS27820;product=acyl carrier protein;protein_id=WP_012733132.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2523830 2525419 . - . ID=gene-NIV78_RS27825;Name=NIV78_RS27825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27825 NZ_CP100137.1 Protein Homology CDS 2523830 2525419 . - 0 ID=cds-WP_017922957.1;Parent=gene-NIV78_RS27825;Dbxref=Genbank:WP_017922957.1;Name=WP_017922957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009959911.1;locus_tag=NIV78_RS27825;product=amino acid adenylation domain-containing protein;protein_id=WP_017922957.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2525722 2526789 . - . ID=gene-NIV78_RS27830;Name=NIV78_RS27830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27830 NZ_CP100137.1 Protein Homology CDS 2525722 2526789 . - 0 ID=cds-WP_017922958.1;Parent=gene-NIV78_RS27830;Dbxref=Genbank:WP_017922958.1;Name=WP_017922958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009982162.1;locus_tag=NIV78_RS27830;product=autoinducer binding domain-containing protein;protein_id=WP_017922958.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2527579 2528976 . - . ID=gene-NIV78_RS27835;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=NIV78_RS27835 NZ_CP100137.1 Protein Homology CDS 2527579 2528976 . - 0 ID=cds-WP_012733129.1;Parent=gene-NIV78_RS27835;Dbxref=Genbank:WP_012733129.1;Name=WP_012733129.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187554.1;locus_tag=NIV78_RS27835;product=dihydrolipoyl dehydrogenase;protein_id=WP_012733129.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2528981 2530345 . - . ID=gene-NIV78_RS27840;Name=NIV78_RS27840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27840 NZ_CP100137.1 Protein Homology CDS 2528981 2530345 . - 0 ID=cds-WP_100556054.1;Parent=gene-NIV78_RS27840;Dbxref=Genbank:WP_100556054.1;Name=WP_100556054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532554.1;locus_tag=NIV78_RS27840;product=2-oxo acid dehydrogenase subunit E2;protein_id=WP_100556054.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2530347 2531390 . - . ID=gene-NIV78_RS27845;Name=NIV78_RS27845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27845 NZ_CP100137.1 Protein Homology CDS 2530347 2531390 . - 0 ID=cds-WP_026051343.1;Parent=gene-NIV78_RS27845;Dbxref=Genbank:WP_026051343.1;Name=WP_026051343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188282.1;locus_tag=NIV78_RS27845;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_026051343.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2531394 2532626 . - . ID=gene-NIV78_RS27850;Name=NIV78_RS27850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27850 NZ_CP100137.1 Protein Homology CDS 2531394 2532626 . - 0 ID=cds-WP_017423188.1;Parent=gene-NIV78_RS27850;Dbxref=Genbank:WP_017423188.1;Name=WP_017423188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603049.1;locus_tag=NIV78_RS27850;product=3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha;protein_id=WP_017423188.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2532597 2533010 . + . ID=gene-NIV78_RS27855;Name=NIV78_RS27855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27855 NZ_CP100137.1 GeneMarkS-2+ CDS 2532597 2533010 . + 0 ID=cds-WP_198292412.1;Parent=gene-NIV78_RS27855;Dbxref=Genbank:WP_198292412.1;Name=WP_198292412.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS27855;product=hypothetical protein;protein_id=WP_198292412.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 2533211 2533321 . - . ID=gene-NIV78_RS27860;Name=NIV78_RS27860;end_range=2533321,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS27860;partial=true;pseudo=true NZ_CP100137.1 Protein Homology CDS 2533211 2533321 . - 0 ID=cds-NIV78_RS27860;Parent=gene-NIV78_RS27860;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2533321,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611267.1;locus_tag=NIV78_RS27860;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 2533341 2533439 . + . ID=gene-NIV78_RS27865;Name=NIV78_RS27865;end_range=2533439,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS27865;partial=true;pseudo=true;start_range=.,2533341 NZ_CP100137.1 Protein Homology CDS 2533341 2533439 . + 0 ID=cds-NIV78_RS27865;Parent=gene-NIV78_RS27865;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2533439,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012173261.1;locus_tag=NIV78_RS27865;partial=true;product=transposase;pseudo=true;start_range=.,2533341;transl_table=11 NZ_CP100137.1 RefSeq gene 2533972 2534343 . - . ID=gene-NIV78_RS27870;Name=NIV78_RS27870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27870 NZ_CP100137.1 Protein Homology CDS 2533972 2534343 . - 0 ID=cds-WP_017922774.1;Parent=gene-NIV78_RS27870;Dbxref=Genbank:WP_017922774.1;Name=WP_017922774.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025786.2;locus_tag=NIV78_RS27870;product=Imm1 family immunity protein;protein_id=WP_017922774.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2534345 2538622 . - . ID=gene-NIV78_RS27875;Name=NIV78_RS27875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27875 NZ_CP100137.1 Protein Homology CDS 2534345 2538622 . - 0 ID=cds-WP_017922773.1;Parent=gene-NIV78_RS27875;Dbxref=Genbank:WP_017922773.1;Name=WP_017922773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733125.1;locus_tag=NIV78_RS27875;product=DUF6531 domain-containing protein;protein_id=WP_017922773.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2538644 2539114 . - . ID=gene-NIV78_RS27880;Name=NIV78_RS27880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27880 NZ_CP100137.1 Protein Homology CDS 2538644 2539114 . - 0 ID=cds-WP_012733124.1;Parent=gene-NIV78_RS27880;Dbxref=Genbank:WP_012733124.1;Name=WP_012733124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733124.1;locus_tag=NIV78_RS27880;product=DUF1795 domain-containing protein;protein_id=WP_012733124.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2539167 2539601 . - . ID=gene-NIV78_RS27885;Name=NIV78_RS27885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27885 NZ_CP100137.1 Protein Homology CDS 2539167 2539601 . - 0 ID=cds-WP_012733123.1;Parent=gene-NIV78_RS27885;Dbxref=Genbank:WP_012733123.1;Name=WP_012733123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733123.1;locus_tag=NIV78_RS27885;product=hypothetical protein;protein_id=WP_012733123.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2539601 2540470 . - . ID=gene-NIV78_RS27890;Name=NIV78_RS27890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27890 NZ_CP100137.1 Protein Homology CDS 2539601 2540470 . - 0 ID=cds-WP_012733122.1;Parent=gene-NIV78_RS27890;Dbxref=Genbank:WP_012733122.1;Name=WP_012733122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733122.1;locus_tag=NIV78_RS27890;product=ankyrin repeat domain-containing protein;protein_id=WP_012733122.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2540470 2543460 . - . ID=gene-NIV78_RS27895;Name=vgrG;gbkey=Gene;gene=vgrG;gene_biotype=protein_coding;locus_tag=NIV78_RS27895 NZ_CP100137.1 Protein Homology CDS 2540470 2543460 . - 0 ID=cds-WP_257757602.1;Parent=gene-NIV78_RS27895;Dbxref=Genbank:WP_257757602.1;Name=WP_257757602.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=vgrG;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752193.1;locus_tag=NIV78_RS27895;product=type VI secretion system tip protein VgrG;protein_id=WP_257757602.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2544322 2544819 . - . ID=gene-NIV78_RS27900;Name=NIV78_RS27900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27900 NZ_CP100137.1 Protein Homology CDS 2544322 2544819 . - 0 ID=cds-WP_012733120.1;Parent=gene-NIV78_RS27900;Dbxref=Genbank:WP_012733120.1;Name=WP_012733120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733120.1;locus_tag=NIV78_RS27900;product=GNAT family N-acetyltransferase;protein_id=WP_012733120.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2544834 2546636 . - . ID=gene-NIV78_RS27905;Name=NIV78_RS27905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27905 NZ_CP100137.1 Protein Homology CDS 2544834 2546636 . - 0 ID=cds-WP_232734553.1;Parent=gene-NIV78_RS27905;Dbxref=Genbank:WP_232734553.1;Name=WP_232734553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689100.1;locus_tag=NIV78_RS27905;product=type III effector HrpK;protein_id=WP_232734553.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2546794 2547870 . - . ID=gene-NIV78_RS27910;Name=NIV78_RS27910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27910 NZ_CP100137.1 Protein Homology CDS 2546794 2547870 . - 0 ID=cds-WP_017924665.1;Parent=gene-NIV78_RS27910;Dbxref=Genbank:WP_017924665.1;Name=WP_017924665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733118.1;locus_tag=NIV78_RS27910;product=hypothetical protein;protein_id=WP_017924665.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2547908 2548867 . + . ID=gene-NIV78_RS27915;Name=NIV78_RS27915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27915 NZ_CP100137.1 Protein Homology CDS 2547908 2548867 . + 0 ID=cds-WP_257757604.1;Parent=gene-NIV78_RS27915;Dbxref=Genbank:WP_257757604.1;Name=WP_257757604.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023363.2;locus_tag=NIV78_RS27915;product=DUF3455 domain-containing protein;protein_id=WP_257757604.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2549341 2550345 . + . ID=gene-NIV78_RS27920;Name=NIV78_RS27920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27920 NZ_CP100137.1 Protein Homology CDS 2549341 2550345 . + 0 ID=cds-WP_232734552.1;Parent=gene-NIV78_RS27920;Dbxref=Genbank:WP_232734552.1;Name=WP_232734552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425121.1;locus_tag=NIV78_RS27920;product=winged helix-turn-helix domain-containing protein;protein_id=WP_232734552.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2550448 2551287 . - . ID=gene-NIV78_RS27925;Name=NIV78_RS27925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27925 NZ_CP100137.1 Protein Homology CDS 2550448 2551287 . - 0 ID=cds-WP_051415295.1;Parent=gene-NIV78_RS27925;Dbxref=Genbank:WP_051415295.1;Name=WP_051415295.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037025.2;locus_tag=NIV78_RS27925;product=phage tail tip lysozyme;protein_id=WP_051415295.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2551437 2553254 . - . ID=gene-NIV78_RS27930;Name=sctC;gbkey=Gene;gene=sctC;gene_biotype=protein_coding;locus_tag=NIV78_RS27930 NZ_CP100137.1 Protein Homology CDS 2551437 2553254 . - 0 ID=cds-WP_017924134.1;Parent=gene-NIV78_RS27930;Dbxref=Genbank:WP_017924134.1;Name=WP_017924134.1;gbkey=CDS;gene=sctC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733114.1;locus_tag=NIV78_RS27930;product=type III secretion system outer membrane ring subunit SctC;protein_id=WP_017924134.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2553292 2554734 . - . ID=gene-NIV78_RS27935;Name=NIV78_RS27935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27935 NZ_CP100137.1 Protein Homology CDS 2553292 2554734 . - 0 ID=cds-WP_017433146.1;Parent=gene-NIV78_RS27935;Dbxref=Genbank:WP_017433146.1;Name=WP_017433146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188507.1;locus_tag=NIV78_RS27935;product=helix-turn-helix transcriptional regulator;protein_id=WP_017433146.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2554962 2555750 . - . ID=gene-NIV78_RS27940;Name=sctT;gbkey=Gene;gene=sctT;gene_biotype=protein_coding;locus_tag=NIV78_RS27940 NZ_CP100137.1 Protein Homology CDS 2554962 2555750 . - 0 ID=cds-WP_171467025.1;Parent=gene-NIV78_RS27940;Dbxref=Genbank:WP_171467025.1;Name=WP_171467025.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctT;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733112.1;locus_tag=NIV78_RS27940;product=type III secretion system export apparatus subunit SctT;protein_id=WP_171467025.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2555792 2556316 . - . ID=gene-NIV78_RS27945;Name=NIV78_RS27945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27945 NZ_CP100137.1 Protein Homology CDS 2555792 2556316 . - 0 ID=cds-WP_017923844.1;Parent=gene-NIV78_RS27945;Dbxref=Genbank:WP_017923844.1;Name=WP_017923844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733111.1;locus_tag=NIV78_RS27945;product=type III secretion protein;protein_id=WP_017923844.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2556313 2557665 . - . ID=gene-NIV78_RS27950;Name=sctN;gbkey=Gene;gene=sctN;gene_biotype=protein_coding;locus_tag=NIV78_RS27950 NZ_CP100137.1 Protein Homology CDS 2556313 2557665 . - 0 ID=cds-WP_012733110.1;Parent=gene-NIV78_RS27950;Dbxref=Genbank:WP_012733110.1;Name=WP_012733110.1;Ontology_term=GO:0030254,GO:0046961,GO:0030257;gbkey=CDS;gene=sctN;go_component=type III protein secretion system complex|0030257||IEA;go_function=proton-transporting ATPase activity%2C rotational mechanism|0046961||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733110.1;locus_tag=NIV78_RS27950;product=type III secretion system ATPase SctN;protein_id=WP_012733110.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2557662 2558642 . - . ID=gene-NIV78_RS27955;Name=sctL;gbkey=Gene;gene=sctL;gene_biotype=protein_coding;locus_tag=NIV78_RS27955 NZ_CP100137.1 Protein Homology CDS 2557662 2558642 . - 0 ID=cds-WP_251107921.1;Parent=gene-NIV78_RS27955;Dbxref=Genbank:WP_251107921.1;Name=WP_251107921.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;gene=sctL;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: protein motif:HMM:NF006574.0;locus_tag=NIV78_RS27955;product=type III secretion system stator protein SctL;protein_id=WP_251107921.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2558684 2559424 . - . ID=gene-NIV78_RS27960;Name=NIV78_RS27960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27960 NZ_CP100137.1 Protein Homology CDS 2558684 2559424 . - 0 ID=cds-WP_012733108.1;Parent=gene-NIV78_RS27960;Dbxref=Genbank:WP_012733108.1;Name=WP_012733108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689089.1;locus_tag=NIV78_RS27960;product=type III secretion protein;protein_id=WP_012733108.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2559444 2560286 . - . ID=gene-NIV78_RS27965;Name=sctJ;gbkey=Gene;gene=sctJ;gene_biotype=protein_coding;locus_tag=NIV78_RS27965 NZ_CP100137.1 Protein Homology CDS 2559444 2560286 . - 0 ID=cds-WP_012733107.1;Parent=gene-NIV78_RS27965;Dbxref=Genbank:WP_012733107.1;Name=WP_012733107.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctJ;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733107.1;locus_tag=NIV78_RS27965;product=type III secretion inner membrane ring lipoprotein SctJ;protein_id=WP_012733107.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2560335 2560721 . - . ID=gene-NIV78_RS27970;Name=NIV78_RS27970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27970 NZ_CP100137.1 Protein Homology CDS 2560335 2560721 . - 0 ID=cds-WP_012733106.1;Parent=gene-NIV78_RS27970;Dbxref=Genbank:WP_012733106.1;Name=WP_012733106.1;Ontology_term=GO:0030254,GO:0003824,GO:0030257;gbkey=CDS;go_component=type III protein secretion system complex|0030257||IEA;go_function=catalytic activity|0003824||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733106.1;locus_tag=NIV78_RS27970;product=type III secretion protein HrpB2;protein_id=WP_012733106.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2560753 2561337 . - . ID=gene-NIV78_RS27975;Name=NIV78_RS27975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS27975 NZ_CP100137.1 Protein Homology CDS 2560753 2561337 . - 0 ID=cds-WP_012733105.1;Parent=gene-NIV78_RS27975;Dbxref=Genbank:WP_012733105.1;Name=WP_012733105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689086.1;locus_tag=NIV78_RS27975;product=HrpB1 family type III secretion system apparatus protein;protein_id=WP_012733105.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2561789 2562847 . + . ID=gene-NIV78_RS27980;Name=sctU;gbkey=Gene;gene=sctU;gene_biotype=protein_coding;locus_tag=NIV78_RS27980 NZ_CP100137.1 Protein Homology CDS 2561789 2562847 . + 0 ID=cds-WP_012733104.1;Parent=gene-NIV78_RS27980;Dbxref=Genbank:WP_012733104.1;Name=WP_012733104.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctU;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733104.1;locus_tag=NIV78_RS27980;product=type III secretion system export apparatus subunit SctU;protein_id=WP_012733104.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2562869 2564974 . + . ID=gene-NIV78_RS27985;Name=sctV;gbkey=Gene;gene=sctV;gene_biotype=protein_coding;locus_tag=NIV78_RS27985 NZ_CP100137.1 Protein Homology CDS 2562869 2564974 . + 0 ID=cds-WP_017924040.1;Parent=gene-NIV78_RS27985;Dbxref=Genbank:WP_017924040.1;Name=WP_017924040.1;Ontology_term=GO:0009306,GO:0016021;gbkey=CDS;gene=sctV;go_component=integral component of membrane|0016021||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733103.1;locus_tag=NIV78_RS27985;product=type III secretion system export apparatus subunit SctV;protein_id=WP_017924040.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2564971 2565636 . + . ID=gene-NIV78_RS27990;Name=sctP;gbkey=Gene;gene=sctP;gene_biotype=protein_coding;locus_tag=NIV78_RS27990 NZ_CP100137.1 Protein Homology CDS 2564971 2565636 . + 0 ID=cds-WP_251107669.1;Parent=gene-NIV78_RS27990;Dbxref=Genbank:WP_251107669.1;Name=WP_251107669.1;gbkey=CDS;gene=sctP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733102.1;locus_tag=NIV78_RS27990;product=type III secretion system protein SctP;protein_id=WP_251107669.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2565648 2566967 . + . ID=gene-NIV78_RS27995;Name=sctQ;gbkey=Gene;gene=sctQ;gene_biotype=protein_coding;locus_tag=NIV78_RS27995 NZ_CP100137.1 Protein Homology CDS 2565648 2566967 . + 0 ID=cds-WP_052690852.1;Parent=gene-NIV78_RS27995;Dbxref=Genbank:WP_052690852.1;Name=WP_052690852.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;gene=sctQ;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689082.1;locus_tag=NIV78_RS27995;product=type III secretion system cytoplasmic ring protein SctQ;protein_id=WP_052690852.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2566951 2567601 . + . ID=gene-NIV78_RS28000;Name=sctR;gbkey=Gene;gene=sctR;gene_biotype=protein_coding;locus_tag=NIV78_RS28000 NZ_CP100137.1 Protein Homology CDS 2566951 2567601 . + 0 ID=cds-WP_012733100.1;Parent=gene-NIV78_RS28000;Dbxref=Genbank:WP_012733100.1;Name=WP_012733100.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;gene=sctR;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004524345.1;locus_tag=NIV78_RS28000;product=type III secretion system export apparatus subunit SctR;protein_id=WP_012733100.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2567617 2567880 . + . ID=gene-NIV78_RS28005;Name=sctS;gbkey=Gene;gene=sctS;gene_biotype=protein_coding;locus_tag=NIV78_RS28005 NZ_CP100137.1 Protein Homology CDS 2567617 2567880 . + 0 ID=cds-WP_012733099.1;Parent=gene-NIV78_RS28005;Dbxref=Genbank:WP_012733099.1;Name=WP_012733099.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctS;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689080.1;locus_tag=NIV78_RS28005;product=type III secretion system export apparatus subunit SctS;protein_id=WP_012733099.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2567897 2568796 . + . ID=gene-NIV78_RS28010;Name=NIV78_RS28010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28010 NZ_CP100137.1 GeneMarkS-2+ CDS 2567897 2568796 . + 0 ID=cds-WP_251118948.1;Parent=gene-NIV78_RS28010;Dbxref=Genbank:WP_251118948.1;Name=WP_251118948.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS28010;product=hypothetical protein;protein_id=WP_251118948.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2569526 2570896 . + . ID=gene-NIV78_RS28015;Name=NIV78_RS28015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28015 NZ_CP100137.1 Protein Homology CDS 2569526 2570896 . + 0 ID=cds-WP_124837175.1;Parent=gene-NIV78_RS28015;Dbxref=Genbank:WP_124837175.1;Name=WP_124837175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733098.1;locus_tag=NIV78_RS28015;product=type III secretion protein;protein_id=WP_124837175.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2570926 2571171 . + . ID=gene-NIV78_RS28020;Name=NIV78_RS28020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28020 NZ_CP100137.1 Protein Homology CDS 2570926 2571171 . + 0 ID=cds-WP_012733097.1;Parent=gene-NIV78_RS28020;Dbxref=Genbank:WP_012733097.1;Name=WP_012733097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009977323.1;locus_tag=NIV78_RS28020;product=hypothetical protein;protein_id=WP_012733097.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2571367 2571591 . + . ID=gene-NIV78_RS28025;Name=NIV78_RS28025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28025 NZ_CP100137.1 Protein Homology CDS 2571367 2571591 . + 0 ID=cds-WP_169511087.1;Parent=gene-NIV78_RS28025;Dbxref=Genbank:WP_169511087.1;Name=WP_169511087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733096.1;locus_tag=NIV78_RS28025;product=hypothetical protein;protein_id=WP_169511087.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2571702 2572157 . + . ID=gene-NIV78_RS28030;Name=NIV78_RS28030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28030 NZ_CP100137.1 Protein Homology CDS 2571702 2572157 . + 0 ID=cds-WP_012733095.1;Parent=gene-NIV78_RS28030;Dbxref=Genbank:WP_012733095.1;Name=WP_012733095.1;Ontology_term=GO:0030254;gbkey=CDS;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009968769.1;locus_tag=NIV78_RS28030;product=CesT family type III secretion system chaperone;protein_id=WP_012733095.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2572214 2575132 . + . ID=gene-NIV78_RS28035;Name=NIV78_RS28035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28035 NZ_CP100137.1 Protein Homology CDS 2572214 2575132 . + 0 ID=cds-WP_012733094.1;Parent=gene-NIV78_RS28035;Dbxref=Genbank:WP_012733094.1;Name=WP_012733094.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689017.1;locus_tag=NIV78_RS28035;product=winged helix-turn-helix domain-containing protein;protein_id=WP_012733094.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2575296 2578973 . + . ID=gene-NIV78_RS28040;Name=NIV78_RS28040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28040 NZ_CP100137.1 Protein Homology CDS 2575296 2578973 . + 0 ID=cds-WP_251107671.1;Parent=gene-NIV78_RS28040;Dbxref=Genbank:WP_251107671.1;Name=WP_251107671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733093.1;locus_tag=NIV78_RS28040;product=autotransporter;protein_id=WP_251107671.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2579091 2579666 . + . ID=gene-NIV78_RS28045;Name=NIV78_RS28045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28045 NZ_CP100137.1 Protein Homology CDS 2579091 2579666 . + 0 ID=cds-WP_012733092.1;Parent=gene-NIV78_RS28045;Dbxref=Genbank:WP_012733092.1;Name=WP_012733092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733092.1;locus_tag=NIV78_RS28045;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_012733092.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2580359 2581504 . + . ID=gene-NIV78_RS28050;Name=NIV78_RS28050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28050 NZ_CP100137.1 Protein Homology CDS 2580359 2581504 . + 0 ID=cds-WP_251107672.1;Parent=gene-NIV78_RS28050;Dbxref=Genbank:WP_251107672.1;Name=WP_251107672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425377.1;locus_tag=NIV78_RS28050;product=diguanylate cyclase;protein_id=WP_251107672.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 2581500 2581769 . - . ID=gene-NIV78_RS28055;Name=NIV78_RS28055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS28055;partial=true;pseudo=true;start_range=.,2581500 NZ_CP100137.1 Protein Homology CDS 2581500 2581769 . - 0 ID=cds-NIV78_RS28055;Parent=gene-NIV78_RS28055;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424034.1;locus_tag=NIV78_RS28055;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2581500;transl_table=11 NZ_CP100137.1 RefSeq gene 2581723 2585244 . - . ID=gene-NIV78_RS28060;Name=NIV78_RS28060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28060 NZ_CP100137.1 Protein Homology CDS 2581723 2585244 . - 0 ID=cds-WP_257757610.1;Parent=gene-NIV78_RS28060;Dbxref=Genbank:WP_257757610.1;Name=WP_257757610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733090.1;locus_tag=NIV78_RS28060;product=type VI secretion protein VasK;protein_id=WP_257757610.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2585241 2586530 . - . ID=gene-NIV78_RS28065;Name=NIV78_RS28065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28065 NZ_CP100137.1 GeneMarkS-2+ CDS 2585241 2586530 . - 0 ID=cds-WP_012733089.1;Parent=gene-NIV78_RS28065;Dbxref=Genbank:WP_012733089.1;Name=WP_012733089.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS28065;product=hypothetical protein;protein_id=WP_012733089.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2586534 2586713 . - . ID=gene-NIV78_RS28070;Name=NIV78_RS28070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28070 NZ_CP100137.1 Protein Homology CDS 2586534 2586713 . - 0 ID=cds-WP_230674447.1;Parent=gene-NIV78_RS28070;Dbxref=Genbank:WP_230674447.1;Name=WP_230674447.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017315.2;locus_tag=NIV78_RS28070;product=PAAR domain-containing protein;protein_id=WP_230674447.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2586879 2588450 . - . ID=gene-NIV78_RS28075;Name=NIV78_RS28075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28075 NZ_CP100137.1 Protein Homology CDS 2586879 2588450 . - 0 ID=cds-WP_012733087.1;Parent=gene-NIV78_RS28075;Dbxref=Genbank:WP_012733087.1;Name=WP_012733087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733087.1;locus_tag=NIV78_RS28075;product=PAAR domain-containing protein;protein_id=WP_012733087.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2588503 2590770 . - . ID=gene-NIV78_RS28080;Name=NIV78_RS28080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28080 NZ_CP100137.1 Protein Homology CDS 2588503 2590770 . - 0 ID=cds-WP_257757612.1;Parent=gene-NIV78_RS28080;Dbxref=Genbank:WP_257757612.1;Name=WP_257757612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733086.1;locus_tag=NIV78_RS28080;product=DUF2235 domain-containing protein;protein_id=WP_257757612.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2590763 2591560 . - . ID=gene-NIV78_RS28085;Name=NIV78_RS28085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28085 NZ_CP100137.1 Protein Homology CDS 2590763 2591560 . - 0 ID=cds-WP_251118952.1;Parent=gene-NIV78_RS28085;Dbxref=Genbank:WP_251118952.1;Name=WP_251118952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733085.1;locus_tag=NIV78_RS28085;product=DUF3304 domain-containing protein;protein_id=WP_251118952.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2591563 2592546 . - . ID=gene-NIV78_RS28090;Name=NIV78_RS28090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28090 NZ_CP100137.1 Protein Homology CDS 2591563 2592546 . - 0 ID=cds-WP_017432667.1;Parent=gene-NIV78_RS28090;Dbxref=Genbank:WP_017432667.1;Name=WP_017432667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330279.1;locus_tag=NIV78_RS28090;product=DUF4123 domain-containing protein;protein_id=WP_017432667.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2592543 2594894 . - . ID=gene-NIV78_RS28095;Name=vgrG;gbkey=Gene;gene=vgrG;gene_biotype=protein_coding;locus_tag=NIV78_RS28095 NZ_CP100137.1 Protein Homology CDS 2592543 2594894 . - 0 ID=cds-WP_257757613.1;Parent=gene-NIV78_RS28095;Dbxref=Genbank:WP_257757613.1;Name=WP_257757613.1;gbkey=CDS;gene=vgrG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733083.1;locus_tag=NIV78_RS28095;product=type VI secretion system tip protein VgrG;protein_id=WP_257757613.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 2594992 2595306 . - . ID=gene-NIV78_RS28100;Name=NIV78_RS28100;end_range=2595306,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS28100;partial=true;pseudo=true NZ_CP100137.1 Protein Homology CDS 2594992 2595306 . - 0 ID=cds-NIV78_RS28100;Parent=gene-NIV78_RS28100;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2595306,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733082.1;locus_tag=NIV78_RS28100;partial=true;product=type VI secretion system contractile sheath large subunit;pseudo=true;transl_table=11 NZ_CP100137.1 RefSeq gene 2595395 2596212 . + . ID=gene-NIV78_RS28105;Name=NIV78_RS28105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28105 NZ_CP100137.1 Protein Homology CDS 2595395 2595743 . + 0 ID=cds-WP_257757507.1-5;Parent=gene-NIV78_RS28105;Dbxref=Genbank:WP_257757507.1;Name=WP_257757507.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS28105;product=IS5 family transposase;protein_id=WP_257757507.1;transl_table=11 NZ_CP100137.1 Protein Homology CDS 2595743 2596212 . + 2 ID=cds-WP_257757507.1-5;Parent=gene-NIV78_RS28105;Dbxref=Genbank:WP_257757507.1;Name=WP_257757507.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS28105;product=IS5 family transposase;protein_id=WP_257757507.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 2596224 2597441 . - . ID=gene-NIV78_RS28110;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=pseudogene;locus_tag=NIV78_RS28110;partial=true;pseudo=true;start_range=.,2596224 NZ_CP100137.1 Protein Homology CDS 2596224 2597441 . - 0 ID=cds-NIV78_RS28110;Parent=gene-NIV78_RS28110;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0033103,GO:0003674,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733082.1;locus_tag=NIV78_RS28110;partial=true;product=type VI secretion system contractile sheath large subunit;pseudo=true;start_range=.,2596224;transl_table=11 NZ_CP100137.1 RefSeq gene 2597484 2597996 . - . ID=gene-NIV78_RS28115;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=NIV78_RS28115 NZ_CP100137.1 Protein Homology CDS 2597484 2597996 . - 0 ID=cds-WP_012733886.1-2;Parent=gene-NIV78_RS28115;Dbxref=Genbank:WP_012733886.1;Name=WP_012733886.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssB;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018434326.1;locus_tag=NIV78_RS28115;product=type VI secretion system contractile sheath small subunit;protein_id=WP_012733886.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2598547 2599089 . + . ID=gene-NIV78_RS28120;Name=NIV78_RS28120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28120 NZ_CP100137.1 Protein Homology CDS 2598547 2599089 . + 0 ID=cds-WP_039205260.1;Parent=gene-NIV78_RS28120;Dbxref=Genbank:WP_039205260.1;Name=WP_039205260.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024935.2;locus_tag=NIV78_RS28120;product=transposase;protein_id=WP_039205260.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2599620 2601263 . - . ID=gene-NIV78_RS28125;Name=NIV78_RS28125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28125 NZ_CP100137.1 Protein Homology CDS 2599620 2601263 . - 0 ID=cds-WP_045678719.1;Parent=gene-NIV78_RS28125;Dbxref=Genbank:WP_045678719.1;Name=WP_045678719.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733080.1;locus_tag=NIV78_RS28125;product=methyl-accepting chemotaxis protein;protein_id=WP_045678719.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2602035 2602715 . + . ID=gene-NIV78_RS28130;Name=NIV78_RS28130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28130 NZ_CP100137.1 Protein Homology CDS 2602035 2602715 . + 0 ID=cds-WP_012733079.1;Parent=gene-NIV78_RS28130;Dbxref=Genbank:WP_012733079.1;Name=WP_012733079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733079.1;locus_tag=NIV78_RS28130;product=YfdX family protein;protein_id=WP_012733079.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2602919 2603338 . + . ID=gene-NIV78_RS28135;Name=NIV78_RS28135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28135 NZ_CP100137.1 Protein Homology CDS 2602919 2603338 . + 0 ID=cds-WP_012733078.1;Parent=gene-NIV78_RS28135;Dbxref=Genbank:WP_012733078.1;Name=WP_012733078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733078.1;locus_tag=NIV78_RS28135;product=phosphate-starvation-inducible PsiE family protein;protein_id=WP_012733078.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2603442 2603849 . - . ID=gene-NIV78_RS28140;Name=NIV78_RS28140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28140 NZ_CP100137.1 Protein Homology CDS 2603442 2603849 . - 0 ID=cds-WP_017424503.1;Parent=gene-NIV78_RS28140;Dbxref=Genbank:WP_017424503.1;Name=WP_017424503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424503.1;locus_tag=NIV78_RS28140;product=hypothetical protein;protein_id=WP_017424503.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2604019 2604510 . + . ID=gene-NIV78_RS28145;Name=NIV78_RS28145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28145 NZ_CP100137.1 Protein Homology CDS 2604019 2604510 . + 0 ID=cds-WP_017922690.1;Parent=gene-NIV78_RS28145;Dbxref=Genbank:WP_017922690.1;Name=WP_017922690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424502.1;locus_tag=NIV78_RS28145;product=low affinity iron permease family protein;protein_id=WP_017922690.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2604937 2605527 . + . ID=gene-NIV78_RS28150;Name=NIV78_RS28150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28150 NZ_CP100137.1 Protein Homology CDS 2604937 2605527 . + 0 ID=cds-WP_012733076.1;Parent=gene-NIV78_RS28150;Dbxref=Genbank:WP_012733076.1;Name=WP_012733076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733076.1;locus_tag=NIV78_RS28150;product=TetR/AcrR family transcriptional regulator;protein_id=WP_012733076.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2605573 2606691 . - . ID=gene-NIV78_RS28155;Name=NIV78_RS28155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28155 NZ_CP100137.1 Protein Homology CDS 2605573 2606691 . - 0 ID=cds-WP_017922691.1;Parent=gene-NIV78_RS28155;Dbxref=Genbank:WP_017922691.1;Name=WP_017922691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733075.1;locus_tag=NIV78_RS28155;product=iron-containing redox enzyme family protein;protein_id=WP_017922691.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2606848 2606988 . - . ID=gene-NIV78_RS28160;Name=NIV78_RS28160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28160 NZ_CP100137.1 GeneMarkS-2+ CDS 2606848 2606988 . - 0 ID=cds-WP_017424500.1;Parent=gene-NIV78_RS28160;Dbxref=Genbank:WP_017424500.1;Name=WP_017424500.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS28160;product=hypothetical protein;protein_id=WP_017424500.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2607731 2607913 . + . ID=gene-NIV78_RS28165;Name=NIV78_RS28165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28165 NZ_CP100137.1 Protein Homology CDS 2607731 2607913 . + 0 ID=cds-WP_012733074.1;Parent=gene-NIV78_RS28165;Dbxref=Genbank:WP_012733074.1;Name=WP_012733074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483193.1;locus_tag=NIV78_RS28165;product=hypothetical protein;protein_id=WP_012733074.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2607927 2609324 . + . ID=gene-NIV78_RS28170;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=NIV78_RS28170 NZ_CP100137.1 Protein Homology CDS 2607927 2609324 . + 0 ID=cds-WP_012733073.1;Parent=gene-NIV78_RS28170;Dbxref=Genbank:WP_012733073.1;Name=WP_012733073.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009907122.1;locus_tag=NIV78_RS28170;product=ATP-dependent RNA helicase DbpA;protein_id=WP_012733073.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2609497 2609634 . - . ID=gene-NIV78_RS28175;Name=NIV78_RS28175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28175 NZ_CP100137.1 Protein Homology CDS 2609497 2609634 . - 0 ID=cds-WP_017424497.1;Parent=gene-NIV78_RS28175;Dbxref=Genbank:WP_017424497.1;Name=WP_017424497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017432194.1;locus_tag=NIV78_RS28175;product=hypothetical protein;protein_id=WP_017424497.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2609854 2611059 . - . ID=gene-NIV78_RS28180;Name=NIV78_RS28180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28180 NZ_CP100137.1 Protein Homology CDS 2609854 2611059 . - 0 ID=cds-WP_012733072.1;Parent=gene-NIV78_RS28180;Dbxref=Genbank:WP_012733072.1;Name=WP_012733072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603285.1;locus_tag=NIV78_RS28180;product=porin;protein_id=WP_012733072.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2611630 2612538 . - . ID=gene-NIV78_RS28185;Name=NIV78_RS28185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28185 NZ_CP100137.1 Protein Homology CDS 2611630 2612538 . - 0 ID=cds-WP_017922692.1;Parent=gene-NIV78_RS28185;Dbxref=Genbank:WP_017922692.1;Name=WP_017922692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733071.1;locus_tag=NIV78_RS28185;product=LysR family transcriptional regulator;protein_id=WP_017922692.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2613346 2615718 . + . ID=gene-NIV78_RS28190;Name=NIV78_RS28190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28190 NZ_CP100137.1 Protein Homology CDS 2613346 2615718 . + 0 ID=cds-WP_012733070.1;Parent=gene-NIV78_RS28190;Dbxref=Genbank:WP_012733070.1;Name=WP_012733070.1;Ontology_term=GO:0000166,GO:0003676,GO:0003887;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleic acid binding|0003676||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424493.1;locus_tag=NIV78_RS28190;product=DNA polymerase II;protein_id=WP_012733070.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2616269 2617480 . - . ID=gene-NIV78_RS28195;Name=NIV78_RS28195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28195 NZ_CP100137.1 Protein Homology CDS 2616269 2617480 . - 0 ID=cds-WP_017922693.1;Parent=gene-NIV78_RS28195;Dbxref=Genbank:WP_017922693.1;Name=WP_017922693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424492.1;locus_tag=NIV78_RS28195;product=galactose mutarotase;protein_id=WP_017922693.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2617925 2618734 . + . ID=gene-NIV78_RS28200;Name=NIV78_RS28200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28200 NZ_CP100137.1 Protein Homology CDS 2617925 2618734 . + 0 ID=cds-WP_017424491.1;Parent=gene-NIV78_RS28200;Dbxref=Genbank:WP_017424491.1;Name=WP_017424491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733068.1;locus_tag=NIV78_RS28200;product=isocitrate lyase/phosphoenolpyruvate mutase family protein;protein_id=WP_017424491.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2619049 2619375 . + . ID=gene-NIV78_RS28205;Name=NIV78_RS28205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28205 NZ_CP100137.1 Protein Homology CDS 2619049 2619375 . + 0 ID=cds-WP_017923450.1;Parent=gene-NIV78_RS28205;Dbxref=Genbank:WP_017923450.1;Name=WP_017923450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485487.1;locus_tag=NIV78_RS28205;product=thioredoxin family protein;protein_id=WP_017923450.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2619390 2619809 . + . ID=gene-NIV78_RS28210;Name=NIV78_RS28210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28210 NZ_CP100137.1 Protein Homology CDS 2619390 2619809 . + 0 ID=cds-WP_017424489.1;Parent=gene-NIV78_RS28210;Dbxref=Genbank:WP_017424489.1;Name=WP_017424489.1;Ontology_term=GO:0008150,GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255409.1;locus_tag=NIV78_RS28210;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_017424489.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2619859 2620893 . - . ID=gene-NIV78_RS28215;Name=NIV78_RS28215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28215 NZ_CP100137.1 Protein Homology CDS 2619859 2620893 . - 0 ID=cds-WP_017923449.1;Parent=gene-NIV78_RS28215;Dbxref=Genbank:WP_017923449.1;Name=WP_017923449.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733065.1;locus_tag=NIV78_RS28215;product=Zn-dependent oxidoreductase;protein_id=WP_017923449.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2620946 2622154 . - . ID=gene-NIV78_RS28220;Name=NIV78_RS28220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28220 NZ_CP100137.1 Protein Homology CDS 2620946 2622154 . - 0 ID=cds-WP_012733064.1;Parent=gene-NIV78_RS28220;Dbxref=Genbank:WP_012733064.1;Name=WP_012733064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009981779.1;locus_tag=NIV78_RS28220;product=D-galactonate dehydratase family protein;protein_id=WP_012733064.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2622221 2622952 . - . ID=gene-NIV78_RS28225;Name=NIV78_RS28225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28225 NZ_CP100137.1 Protein Homology CDS 2622221 2622952 . - 0 ID=cds-WP_012733063.1;Parent=gene-NIV78_RS28225;Dbxref=Genbank:WP_012733063.1;Name=WP_012733063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198528.1;locus_tag=NIV78_RS28225;product=GntR family transcriptional regulator;protein_id=WP_012733063.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2623098 2624570 . + . ID=gene-NIV78_RS28230;Name=NIV78_RS28230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28230 NZ_CP100137.1 Protein Homology CDS 2623098 2624570 . + 0 ID=cds-WP_251107680.1;Parent=gene-NIV78_RS28230;Dbxref=Genbank:WP_251107680.1;Name=WP_251107680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733062.1;locus_tag=NIV78_RS28230;product=mannitol dehydrogenase family protein;protein_id=WP_251107680.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2624691 2626001 . + . ID=gene-NIV78_RS28235;Name=NIV78_RS28235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28235 NZ_CP100137.1 Protein Homology CDS 2624691 2626001 . + 0 ID=cds-WP_251107681.1;Parent=gene-NIV78_RS28235;Dbxref=Genbank:WP_251107681.1;Name=WP_251107681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733061.1;locus_tag=NIV78_RS28235;product=MFS transporter;protein_id=WP_251107681.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2626582 2626761 . - . ID=gene-NIV78_RS28240;Name=NIV78_RS28240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28240 NZ_CP100137.1 GeneMarkS-2+ CDS 2626582 2626761 . - 0 ID=cds-WP_157384094.1;Parent=gene-NIV78_RS28240;Dbxref=Genbank:WP_157384094.1;Name=WP_157384094.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS28240;product=hypothetical protein;protein_id=WP_157384094.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2626955 2628610 . + . ID=gene-NIV78_RS28245;Name=NIV78_RS28245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28245 NZ_CP100137.1 Protein Homology CDS 2626955 2628610 . + 0 ID=cds-WP_251107682.1;Parent=gene-NIV78_RS28245;Dbxref=Genbank:WP_251107682.1;Name=WP_251107682.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733060.1;locus_tag=NIV78_RS28245;product=c-type cytochrome;protein_id=WP_251107682.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2628607 2629266 . + . ID=gene-NIV78_RS28250;Name=NIV78_RS28250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28250 NZ_CP100137.1 Protein Homology CDS 2628607 2629266 . + 0 ID=cds-WP_017922752.1;Parent=gene-NIV78_RS28250;Dbxref=Genbank:WP_017922752.1;Name=WP_017922752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424397.1;locus_tag=NIV78_RS28250;product=molecular chaperone TorD family protein;protein_id=WP_017922752.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2629276 2631798 . + . ID=gene-NIV78_RS28255;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=NIV78_RS28255 NZ_CP100137.1 Protein Homology CDS 2629276 2631798 . + 0 ID=cds-WP_017922751.1;Parent=gene-NIV78_RS28255;Dbxref=Genbank:WP_017922751.1;Name=WP_017922751.1;Ontology_term=GO:0030151,GO:0043546,GO:0050626,GO:0042597;gbkey=CDS;gene=torA;go_component=periplasmic space|0042597||IEA;go_function=molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,trimethylamine-N-oxide reductase (cytochrome c) activity|0050626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733058.1;locus_tag=NIV78_RS28255;product=trimethylamine-N-oxide reductase TorA;protein_id=WP_017922751.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2631930 2632691 . - . ID=gene-NIV78_RS28260;Name=NIV78_RS28260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28260 NZ_CP100137.1 Protein Homology CDS 2631930 2632691 . - 0 ID=cds-WP_257757615.1;Parent=gene-NIV78_RS28260;Dbxref=Genbank:WP_257757615.1;Name=WP_257757615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881299.1;locus_tag=NIV78_RS28260;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_257757615.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2632754 2633554 . - . ID=gene-NIV78_RS28265;Name=NIV78_RS28265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28265 NZ_CP100137.1 Protein Homology CDS 2632754 2633554 . - 0 ID=cds-WP_017922749.1;Parent=gene-NIV78_RS28265;Dbxref=Genbank:WP_017922749.1;Name=WP_017922749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762186.1;locus_tag=NIV78_RS28265;product=SDR family oxidoreductase;protein_id=WP_017922749.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 2633669 2633898 . + . ID=gene-NIV78_RS28270;Name=NIV78_RS28270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS28270;partial=true;pseudo=true;start_range=.,2633669 NZ_CP100137.1 Protein Homology CDS 2633669 2633898 . + 0 ID=cds-NIV78_RS28270;Parent=gene-NIV78_RS28270;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611206.1;locus_tag=NIV78_RS28270;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2633669;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 2634143 2634331 . + . ID=gene-NIV78_RS28275;Name=NIV78_RS28275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS28275;partial=true;pseudo=true;start_range=.,2634143 NZ_CP100137.1 Protein Homology CDS 2634143 2634331 . + 0 ID=cds-NIV78_RS28275;Parent=gene-NIV78_RS28275;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612184.1;locus_tag=NIV78_RS28275;partial=true;product=transposase;pseudo=true;start_range=.,2634143;transl_table=11 NZ_CP100137.1 RefSeq gene 2634265 2634432 . - . ID=gene-NIV78_RS28280;Name=NIV78_RS28280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28280 NZ_CP100137.1 GeneMarkS-2+ CDS 2634265 2634432 . - 0 ID=cds-WP_162486896.1;Parent=gene-NIV78_RS28280;Dbxref=Genbank:WP_162486896.1;Name=WP_162486896.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS28280;product=hypothetical protein;protein_id=WP_162486896.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2634444 2635091 . + . ID=gene-NIV78_RS28285;Name=NIV78_RS28285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28285 NZ_CP100137.1 Protein Homology CDS 2634444 2635091 . + 0 ID=cds-WP_017424395.1;Parent=gene-NIV78_RS28285;Dbxref=Genbank:WP_017424395.1;Name=WP_017424395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424395.1;locus_tag=NIV78_RS28285;product=response regulator transcription factor;protein_id=WP_017424395.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2635480 2636598 . - . ID=gene-NIV78_RS28290;Name=NIV78_RS28290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28290 NZ_CP100137.1 Protein Homology CDS 2635480 2636598 . - 0 ID=cds-WP_017922747.1;Parent=gene-NIV78_RS28290;Dbxref=Genbank:WP_017922747.1;Name=WP_017922747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733054.1;locus_tag=NIV78_RS28290;product=alpha-hydroxy-acid oxidizing protein;protein_id=WP_017922747.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2636595 2637281 . - . ID=gene-NIV78_RS28295;Name=NIV78_RS28295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28295 NZ_CP100137.1 Protein Homology CDS 2636595 2637281 . - 0 ID=cds-WP_017922746.1;Parent=gene-NIV78_RS28295;Dbxref=Genbank:WP_017922746.1;Name=WP_017922746.1;Ontology_term=GO:0005506,GO:0016706,GO:0031418;gbkey=CDS;go_function=iron ion binding|0005506||IEA,2-oxoglutarate-dependent dioxygenase activity|0016706||IEA,L-ascorbic acid binding|0031418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011515666.1;locus_tag=NIV78_RS28295;product=Fe2+-dependent dioxygenase;protein_id=WP_017922746.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2637409 2639631 . - . ID=gene-NIV78_RS28300;Name=NIV78_RS28300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28300 NZ_CP100137.1 Protein Homology CDS 2637409 2639631 . - 0 ID=cds-WP_017922745.1;Parent=gene-NIV78_RS28300;Dbxref=Genbank:WP_017922745.1;Name=WP_017922745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733052.1;locus_tag=NIV78_RS28300;product=TonB-dependent receptor;protein_id=WP_017922745.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 2640032 2640557 . - . ID=gene-NIV78_RS28305;Name=NIV78_RS28305;end_range=2640557,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS28305;partial=true;pseudo=true;start_range=.,2640032 NZ_CP100137.1 Protein Homology CDS 2640032 2640557 . - 0 ID=cds-NIV78_RS28305;Parent=gene-NIV78_RS28305;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2640557,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611281.1;locus_tag=NIV78_RS28305;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,2640032;transl_table=11 NZ_CP100137.1 RefSeq gene 2640634 2641451 . + . ID=gene-NIV78_RS28310;Name=NIV78_RS28310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28310 NZ_CP100137.1 Protein Homology CDS 2640634 2640982 . + 0 ID=cds-WP_085962356.1-4;Parent=gene-NIV78_RS28310;Dbxref=Genbank:WP_085962356.1;Name=WP_085962356.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS28310;product=IS5 family transposase;protein_id=WP_085962356.1;transl_table=11 NZ_CP100137.1 Protein Homology CDS 2640982 2641451 . + 2 ID=cds-WP_085962356.1-4;Parent=gene-NIV78_RS28310;Dbxref=Genbank:WP_085962356.1;Name=WP_085962356.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS28310;product=IS5 family transposase;protein_id=WP_085962356.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2641551 2642368 . + . ID=gene-NIV78_RS28315;Name=NIV78_RS28315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28315 NZ_CP100137.1 Protein Homology CDS 2641551 2641899 . + 0 ID=cds-WP_085962451.1-6;Parent=gene-NIV78_RS28315;Dbxref=Genbank:WP_085962451.1;Name=WP_085962451.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS28315;product=IS5 family transposase;protein_id=WP_085962451.1;transl_table=11 NZ_CP100137.1 Protein Homology CDS 2641899 2642368 . + 2 ID=cds-WP_085962451.1-6;Parent=gene-NIV78_RS28315;Dbxref=Genbank:WP_085962451.1;Name=WP_085962451.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS28315;product=IS5 family transposase;protein_id=WP_085962451.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2642929 2643384 . + . ID=gene-NIV78_RS28320;Name=NIV78_RS28320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28320 NZ_CP100137.1 Protein Homology CDS 2642929 2643384 . + 0 ID=cds-WP_015878110.1;Parent=gene-NIV78_RS28320;Dbxref=Genbank:WP_015878110.1;Name=WP_015878110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878110.1;locus_tag=NIV78_RS28320;product=cellulose synthase;protein_id=WP_015878110.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2643450 2644358 . + . ID=gene-NIV78_RS28325;Name=bcsP;gbkey=Gene;gene=bcsP;gene_biotype=protein_coding;locus_tag=NIV78_RS28325 NZ_CP100137.1 Protein Homology CDS 2643450 2644358 . + 0 ID=cds-WP_251107722.1;Parent=gene-NIV78_RS28325;Dbxref=Genbank:WP_251107722.1;Name=WP_251107722.1;gbkey=CDS;gene=bcsP;inference=COORDINATES: protein motif:HMM:NF040718.1;locus_tag=NIV78_RS28325;product=cellulose biosynthesis protein BcsP;protein_id=WP_251107722.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2644355 2645146 . + . ID=gene-NIV78_RS28330;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=protein_coding;locus_tag=NIV78_RS28330 NZ_CP100137.1 Protein Homology CDS 2644355 2645146 . + 0 ID=cds-WP_017924897.1;Parent=gene-NIV78_RS28330;Dbxref=Genbank:WP_017924897.1;Name=WP_017924897.1;Ontology_term=GO:0090540;gbkey=CDS;gene=bcsQ;go_process=bacterial cellulose biosynthetic process|0090540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878112.1;locus_tag=NIV78_RS28330;product=cellulose biosynthesis protein BcsQ;protein_id=WP_017924897.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2645143 2647347 . + . ID=gene-NIV78_RS28335;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=NIV78_RS28335 NZ_CP100137.1 Protein Homology CDS 2645143 2647347 . + 0 ID=cds-WP_153478356.1;Parent=gene-NIV78_RS28335;Dbxref=Genbank:WP_153478356.1;Name=WP_153478356.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878113.1;locus_tag=NIV78_RS28335;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_153478356.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2647454 2649979 . + . ID=gene-NIV78_RS28340;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=NIV78_RS28340 NZ_CP100137.1 Protein Homology CDS 2647454 2649979 . + 0 ID=cds-WP_257758078.1;Parent=gene-NIV78_RS28340;Dbxref=Genbank:WP_257758078.1;Name=WP_257758078.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878114.1;locus_tag=NIV78_RS28340;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_257758078.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2649984 2651219 . + . ID=gene-NIV78_RS28345;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=NIV78_RS28345 NZ_CP100137.1 Protein Homology CDS 2649984 2651219 . + 0 ID=cds-WP_251107721.1;Parent=gene-NIV78_RS28345;Dbxref=Genbank:WP_251107721.1;Name=WP_251107721.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bcsZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878115.1;locus_tag=NIV78_RS28345;product=cellulose synthase complex periplasmic endoglucanase BcsZ;protein_id=WP_251107721.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2651210 2656024 . + . ID=gene-NIV78_RS28350;Name=NIV78_RS28350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28350 NZ_CP100137.1 Protein Homology CDS 2651210 2656024 . + 0 ID=cds-WP_176359025.1;Parent=gene-NIV78_RS28350;Dbxref=Genbank:WP_176359025.1;Name=WP_176359025.1;Ontology_term=GO:0030244,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878116.1;locus_tag=NIV78_RS28350;product=cellulose synthase subunit BcsC-related outer membrane protein;protein_id=WP_176359025.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2656205 2656531 . - . ID=gene-NIV78_RS28355;Name=NIV78_RS28355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28355 NZ_CP100137.1 Protein Homology CDS 2656205 2656531 . - 0 ID=cds-WP_257757619.1;Parent=gene-NIV78_RS28355;Dbxref=Genbank:WP_257757619.1;Name=WP_257757619.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.2;locus_tag=NIV78_RS28355;product=LysR substrate-binding domain-containing protein;protein_id=WP_257757619.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 2657025 2657150 . - . ID=gene-NIV78_RS28360;Name=NIV78_RS28360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS28360;partial=true;pseudo=true;start_range=.,2657025 NZ_CP100137.1 Protein Homology CDS 2657025 2657150 . - 0 ID=cds-NIV78_RS28360;Parent=gene-NIV78_RS28360;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012354.2;locus_tag=NIV78_RS28360;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,2657025;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 2657250 2658368 . + . ID=gene-NIV78_RS28365;Name=NIV78_RS28365;end_range=2658368,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS28365;partial=true;pseudo=true NZ_CP100137.1 Protein Homology CDS 2657250 2658368 . + 0 ID=cds-NIV78_RS28365;Parent=gene-NIV78_RS28365;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2658368,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004534236.1;locus_tag=NIV78_RS28365;partial=true;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP100137.1 RefSeq gene 2658843 2659055 . + . ID=gene-NIV78_RS28370;Name=NIV78_RS28370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28370 NZ_CP100137.1 GeneMarkS-2+ CDS 2658843 2659055 . + 0 ID=cds-WP_257757620.1;Parent=gene-NIV78_RS28370;Dbxref=Genbank:WP_257757620.1;Name=WP_257757620.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS28370;product=hypothetical protein;protein_id=WP_257757620.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2659106 2660575 . + . ID=gene-NIV78_RS28375;Name=NIV78_RS28375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28375 NZ_CP100137.1 Protein Homology CDS 2659106 2660575 . + 0 ID=cds-WP_251107720.1;Parent=gene-NIV78_RS28375;Dbxref=Genbank:WP_251107720.1;Name=WP_251107720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878119.1;locus_tag=NIV78_RS28375;product=carbohydrate porin;protein_id=WP_251107720.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2660595 2661782 . - . ID=gene-NIV78_RS28380;Name=NIV78_RS28380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28380 NZ_CP100137.1 Protein Homology CDS 2660595 2661782 . - 0 ID=cds-WP_015878120.1;Parent=gene-NIV78_RS28380;Dbxref=Genbank:WP_015878120.1;Name=WP_015878120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425416.1;locus_tag=NIV78_RS28380;product=GDSL-type esterase/lipase family protein;protein_id=WP_015878120.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2661902 2664085 . - . ID=gene-NIV78_RS28385;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=NIV78_RS28385 NZ_CP100137.1 Protein Homology CDS 2661902 2664085 . - 0 ID=cds-WP_015878121.1;Parent=gene-NIV78_RS28385;Dbxref=Genbank:WP_015878121.1;Name=WP_015878121.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878121.1;locus_tag=NIV78_RS28385;product=catalase/peroxidase HPI;protein_id=WP_015878121.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2664397 2664825 . - . ID=gene-NIV78_RS28390;Name=NIV78_RS28390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28390 NZ_CP100137.1 GeneMarkS-2+ CDS 2664397 2664825 . - 0 ID=cds-WP_257757621.1;Parent=gene-NIV78_RS28390;Dbxref=Genbank:WP_257757621.1;Name=WP_257757621.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS28390;product=hypothetical protein;protein_id=WP_257757621.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2664956 2665132 . + . ID=gene-NIV78_RS28395;Name=NIV78_RS28395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28395 NZ_CP100137.1 Protein Homology CDS 2664956 2665132 . + 0 ID=cds-WP_017424518.1;Parent=gene-NIV78_RS28395;Dbxref=Genbank:WP_017424518.1;Name=WP_017424518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424518.1;locus_tag=NIV78_RS28395;product=hypothetical protein;protein_id=WP_017424518.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2665465 2666247 . + . ID=gene-NIV78_RS28400;Name=NIV78_RS28400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28400 NZ_CP100137.1 Protein Homology CDS 2665465 2666247 . + 0 ID=cds-WP_015878122.1;Parent=gene-NIV78_RS28400;Dbxref=Genbank:WP_015878122.1;Name=WP_015878122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090096.1;locus_tag=NIV78_RS28400;product=ABC transporter substrate-binding protein;protein_id=WP_015878122.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2666448 2667563 . + . ID=gene-NIV78_RS28405;Name=NIV78_RS28405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28405 NZ_CP100137.1 Protein Homology CDS 2666448 2667563 . + 0 ID=cds-WP_015878123.1;Parent=gene-NIV78_RS28405;Dbxref=Genbank:WP_015878123.1;Name=WP_015878123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331142.1;locus_tag=NIV78_RS28405;product=M14 family metallopeptidase;protein_id=WP_015878123.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2667973 2669130 . + . ID=gene-NIV78_RS28410;Name=NIV78_RS28410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28410 NZ_CP100137.1 Protein Homology CDS 2667973 2669130 . + 0 ID=cds-WP_015878124.1;Parent=gene-NIV78_RS28410;Dbxref=Genbank:WP_015878124.1;Name=WP_015878124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603693.1;locus_tag=NIV78_RS28410;product=porin;protein_id=WP_015878124.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2669334 2669594 . + . ID=gene-NIV78_RS28415;Name=NIV78_RS28415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28415 NZ_CP100137.1 Protein Homology CDS 2669334 2669594 . + 0 ID=cds-WP_015878125.1;Parent=gene-NIV78_RS28415;Dbxref=Genbank:WP_015878125.1;Name=WP_015878125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878125.1;locus_tag=NIV78_RS28415;product=DUF2866 domain-containing protein;protein_id=WP_015878125.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2669718 2670125 . + . ID=gene-NIV78_RS28420;Name=NIV78_RS28420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28420 NZ_CP100137.1 Protein Homology CDS 2669718 2670125 . + 0 ID=cds-WP_015878126.1;Parent=gene-NIV78_RS28420;Dbxref=Genbank:WP_015878126.1;Name=WP_015878126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878126.1;locus_tag=NIV78_RS28420;product=DUF6232 family protein;protein_id=WP_015878126.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2670827 2671846 . - . ID=gene-NIV78_RS28425;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=NIV78_RS28425 NZ_CP100137.1 Protein Homology CDS 2670827 2671846 . - 0 ID=cds-WP_015878127.1;Parent=gene-NIV78_RS28425;Dbxref=Genbank:WP_015878127.1;Name=WP_015878127.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=cellular amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878127.1;locus_tag=NIV78_RS28425;product=low-specificity L-threonine aldolase;protein_id=WP_015878127.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2672020 2672508 . - . ID=gene-NIV78_RS28430;Name=NIV78_RS28430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28430 NZ_CP100137.1 Protein Homology CDS 2672020 2672508 . - 0 ID=cds-WP_015878128.1;Parent=gene-NIV78_RS28430;Dbxref=Genbank:WP_015878128.1;Name=WP_015878128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878128.1;locus_tag=NIV78_RS28430;product=MarR family transcriptional regulator;protein_id=WP_015878128.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2673039 2673599 . - . ID=gene-NIV78_RS28435;Name=NIV78_RS28435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28435 NZ_CP100137.1 Protein Homology CDS 2673039 2673599 . - 0 ID=cds-WP_251107719.1;Parent=gene-NIV78_RS28435;Dbxref=Genbank:WP_251107719.1;Name=WP_251107719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878129.1;locus_tag=NIV78_RS28435;product=glycine zipper family protein;protein_id=WP_251107719.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2673617 2673958 . - . ID=gene-NIV78_RS28440;Name=NIV78_RS28440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28440 NZ_CP100137.1 Protein Homology CDS 2673617 2673958 . - 0 ID=cds-WP_017924050.1;Parent=gene-NIV78_RS28440;Dbxref=Genbank:WP_017924050.1;Name=WP_017924050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487960.1;locus_tag=NIV78_RS28440;product=hypothetical protein;protein_id=WP_017924050.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2674456 2675871 . + . ID=gene-NIV78_RS28445;Name=NIV78_RS28445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28445 NZ_CP100137.1 Protein Homology CDS 2674456 2675871 . + 0 ID=cds-WP_015878131.1;Parent=gene-NIV78_RS28445;Dbxref=Genbank:WP_015878131.1;Name=WP_015878131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009894127.1;locus_tag=NIV78_RS28445;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_015878131.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2675917 2676924 . + . ID=gene-NIV78_RS28450;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=NIV78_RS28450 NZ_CP100137.1 Protein Homology CDS 2675917 2676924 . + 0 ID=cds-WP_015878132.1;Parent=gene-NIV78_RS28450;Dbxref=Genbank:WP_015878132.1;Name=WP_015878132.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548943.1;locus_tag=NIV78_RS28450;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_015878132.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2676896 2677090 . + . ID=gene-NIV78_RS28455;Name=NIV78_RS28455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28455 NZ_CP100137.1 Protein Homology CDS 2676896 2677090 . + 0 ID=cds-WP_015878133.1;Parent=gene-NIV78_RS28455;Dbxref=Genbank:WP_015878133.1;Name=WP_015878133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878133.1;locus_tag=NIV78_RS28455;product=hypothetical protein;protein_id=WP_015878133.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2677161 2678231 . - . ID=gene-NIV78_RS28460;Name=NIV78_RS28460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28460 NZ_CP100137.1 Protein Homology CDS 2677161 2678231 . - 0 ID=cds-WP_257757622.1;Parent=gene-NIV78_RS28460;Dbxref=Genbank:WP_257757622.1;Name=WP_257757622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878134.1;locus_tag=NIV78_RS28460;product=squalene/phytoene synthase family protein;protein_id=WP_257757622.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2678444 2678731 . + . ID=gene-NIV78_RS28465;Name=NIV78_RS28465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28465 NZ_CP100137.1 Protein Homology CDS 2678444 2678731 . + 0 ID=cds-WP_015878135.1;Parent=gene-NIV78_RS28465;Dbxref=Genbank:WP_015878135.1;Name=WP_015878135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878135.1;locus_tag=NIV78_RS28465;product=hypothetical protein;protein_id=WP_015878135.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2678835 2679371 . - . ID=gene-NIV78_RS28470;Name=NIV78_RS28470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28470 NZ_CP100137.1 Protein Homology CDS 2678835 2679371 . - 0 ID=cds-WP_017924869.1;Parent=gene-NIV78_RS28470;Dbxref=Genbank:WP_017924869.1;Name=WP_017924869.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013343393.1;locus_tag=NIV78_RS28470;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_017924869.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2679777 2680706 . - . ID=gene-NIV78_RS28475;Name=NIV78_RS28475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28475 NZ_CP100137.1 Protein Homology CDS 2679777 2680706 . - 0 ID=cds-WP_017924562.1;Parent=gene-NIV78_RS28475;Dbxref=Genbank:WP_017924562.1;Name=WP_017924562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878137.1;locus_tag=NIV78_RS28475;product=LysR family transcriptional regulator;protein_id=WP_017924562.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2680904 2682130 . + . ID=gene-NIV78_RS28480;Name=NIV78_RS28480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28480 NZ_CP100137.1 Protein Homology CDS 2680904 2682130 . + 0 ID=cds-WP_015878138.1;Parent=gene-NIV78_RS28480;Dbxref=Genbank:WP_015878138.1;Name=WP_015878138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691598.1;locus_tag=NIV78_RS28480;product=YbfB/YjiJ family MFS transporter;protein_id=WP_015878138.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2682233 2682463 . + . ID=gene-NIV78_RS28485;Name=NIV78_RS28485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28485 NZ_CP100137.1 Protein Homology CDS 2682233 2682463 . + 0 ID=cds-WP_017924353.1;Parent=gene-NIV78_RS28485;Dbxref=Genbank:WP_017924353.1;Name=WP_017924353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548933.1;locus_tag=NIV78_RS28485;product=hypothetical protein;protein_id=WP_017924353.1;transl_table=11 NZ_CP100137.1 RefSeq pseudogene 2682532 2686421 . - . ID=gene-NIV78_RS28490;Name=NIV78_RS28490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS28490;pseudo=true NZ_CP100137.1 Protein Homology CDS 2682532 2686421 . - 0 ID=cds-NIV78_RS28490;Parent=gene-NIV78_RS28490;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878140.1;locus_tag=NIV78_RS28490;product=DUF748 domain-containing protein;pseudo=true;transl_table=11 NZ_CP100137.1 RefSeq gene 2686835 2688241 . - . ID=gene-NIV78_RS28495;Name=NIV78_RS28495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28495 NZ_CP100137.1 Protein Homology CDS 2686835 2688241 . - 0 ID=cds-WP_251107923.1;Parent=gene-NIV78_RS28495;Dbxref=Genbank:WP_251107923.1;Name=WP_251107923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410955.1;locus_tag=NIV78_RS28495;product=DUF1214 domain-containing protein;protein_id=WP_251107923.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2688651 2689001 . + . ID=gene-NIV78_RS28500;Name=NIV78_RS28500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28500 NZ_CP100137.1 Protein Homology CDS 2688651 2689001 . + 0 ID=cds-WP_015878142.1;Parent=gene-NIV78_RS28500;Dbxref=Genbank:WP_015878142.1;Name=WP_015878142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878142.1;locus_tag=NIV78_RS28500;product=DOPA 4%2C5-dioxygenase family protein;protein_id=WP_015878142.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2689163 2692066 . + . ID=gene-NIV78_RS28505;Name=NIV78_RS28505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28505 NZ_CP100137.1 Protein Homology CDS 2689163 2692066 . + 0 ID=cds-WP_251107718.1;Parent=gene-NIV78_RS28505;Dbxref=Genbank:WP_251107718.1;Name=WP_251107718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011852595.1;locus_tag=NIV78_RS28505;product=heavy metal translocating P-type ATPase;protein_id=WP_251107718.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2692477 2692632 . - . ID=gene-NIV78_RS28510;Name=NIV78_RS28510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28510 NZ_CP100137.1 Protein Homology CDS 2692477 2692632 . - 0 ID=cds-WP_015878144.1;Parent=gene-NIV78_RS28510;Dbxref=Genbank:WP_015878144.1;Name=WP_015878144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187391.1;locus_tag=NIV78_RS28510;product=hypothetical protein;protein_id=WP_015878144.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2692779 2694200 . - . ID=gene-NIV78_RS28515;Name=NIV78_RS28515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28515 NZ_CP100137.1 GeneMarkS-2+ CDS 2692779 2694200 . - 0 ID=cds-WP_176359026.1;Parent=gene-NIV78_RS28515;Dbxref=Genbank:WP_176359026.1;Name=WP_176359026.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS28515;product=hypothetical protein;protein_id=WP_176359026.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2694432 2695127 . - . ID=gene-NIV78_RS28520;Name=NIV78_RS28520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28520 NZ_CP100137.1 Protein Homology CDS 2694432 2695127 . - 0 ID=cds-WP_017425522.1;Parent=gene-NIV78_RS28520;Dbxref=Genbank:WP_017425522.1;Name=WP_017425522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331058.1;locus_tag=NIV78_RS28520;product=MgtC/SapB family protein;protein_id=WP_017425522.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2695238 2696350 . + . ID=gene-NIV78_RS28525;Name=NIV78_RS28525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28525 NZ_CP100137.1 Protein Homology CDS 2695238 2696350 . + 0 ID=cds-WP_017924341.1;Parent=gene-NIV78_RS28525;Dbxref=Genbank:WP_017924341.1;Name=WP_017924341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878147.1;locus_tag=NIV78_RS28525;product=AGE family epimerase/isomerase;protein_id=WP_017924341.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2696570 2697013 . + . ID=gene-NIV78_RS28530;Name=NIV78_RS28530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28530 NZ_CP100137.1 Protein Homology CDS 2696570 2697013 . + 0 ID=cds-WP_017425521.1;Parent=gene-NIV78_RS28530;Dbxref=Genbank:WP_017425521.1;Name=WP_017425521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878148.1;locus_tag=NIV78_RS28530;product=PaaI family thioesterase;protein_id=WP_017425521.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2697175 2698239 . - . ID=gene-NIV78_RS28535;Name=NIV78_RS28535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28535 NZ_CP100137.1 Protein Homology CDS 2697175 2698239 . - 0 ID=cds-WP_100555934.1;Parent=gene-NIV78_RS28535;Dbxref=Genbank:WP_100555934.1;Name=WP_100555934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878149.1;locus_tag=NIV78_RS28535;product=CoA transferase;protein_id=WP_100555934.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2698331 2699521 . - . ID=gene-NIV78_RS28540;Name=prpF;gbkey=Gene;gene=prpF;gene_biotype=protein_coding;locus_tag=NIV78_RS28540 NZ_CP100137.1 Protein Homology CDS 2698331 2699521 . - 0 ID=cds-WP_017923272.1;Parent=gene-NIV78_RS28540;Dbxref=Genbank:WP_017923272.1;Name=WP_017923272.1;Ontology_term=GO:0019629;gbkey=CDS;gene=prpF;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090131.1;locus_tag=NIV78_RS28540;product=2-methylaconitate cis-trans isomerase PrpF;protein_id=WP_017923272.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2699648 2702242 . - . ID=gene-NIV78_RS28545;Name=acnD;gbkey=Gene;gene=acnD;gene_biotype=protein_coding;locus_tag=NIV78_RS28545 NZ_CP100137.1 Protein Homology CDS 2699648 2702242 . - 0 ID=cds-WP_017923271.1;Parent=gene-NIV78_RS28545;Dbxref=Genbank:WP_017923271.1;Name=WP_017923271.1;Ontology_term=GO:0019629,GO:0047456;gbkey=CDS;gene=acnD;go_function=2-methylisocitrate dehydratase activity|0047456||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009981139.1;locus_tag=NIV78_RS28545;product=Fe/S-dependent 2-methylisocitrate dehydratase AcnD;protein_id=WP_017923271.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2702328 2703497 . - . ID=gene-NIV78_RS28550;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=NIV78_RS28550 NZ_CP100137.1 Protein Homology CDS 2702328 2703497 . - 0 ID=cds-WP_017923270.1;Parent=gene-NIV78_RS28550;Dbxref=Genbank:WP_017923270.1;Name=WP_017923270.1;Ontology_term=GO:0050440;gbkey=CDS;gene=prpC;go_function=2-methylcitrate synthase activity|0050440||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757728.1;locus_tag=NIV78_RS28550;product=2-methylcitrate synthase;protein_id=WP_017923270.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2703599 2704492 . - . ID=gene-NIV78_RS28555;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=NIV78_RS28555 NZ_CP100137.1 Protein Homology CDS 2703599 2704492 . - 0 ID=cds-WP_015878153.1;Parent=gene-NIV78_RS28555;Dbxref=Genbank:WP_015878153.1;Name=WP_015878153.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009901410.1;locus_tag=NIV78_RS28555;product=methylisocitrate lyase;protein_id=WP_015878153.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2704707 2706737 . + . ID=gene-NIV78_RS28560;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;locus_tag=NIV78_RS28560 NZ_CP100137.1 Protein Homology CDS 2704707 2706737 . + 0 ID=cds-WP_100555932.1;Parent=gene-NIV78_RS28560;Dbxref=Genbank:WP_100555932.1;Name=WP_100555932.1;Ontology_term=GO:0000160,GO:0006355,GO:0019629,GO:0000156,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=prpR;go_function=phosphorelay response regulator activity|0000156||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878154.1;locus_tag=NIV78_RS28560;product=propionate catabolism operon regulatory protein PrpR;protein_id=WP_100555932.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2707076 2709265 . + . ID=gene-NIV78_RS28565;Name=NIV78_RS28565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28565 NZ_CP100137.1 Protein Homology CDS 2707076 2709265 . + 0 ID=cds-WP_251107717.1;Parent=gene-NIV78_RS28565;Dbxref=Genbank:WP_251107717.1;Name=WP_251107717.1;Ontology_term=GO:0015891,GO:0015343,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=siderophore transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478323.1;locus_tag=NIV78_RS28565;product=TonB-dependent siderophore receptor;protein_id=WP_251107717.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2709311 2712298 . - . ID=gene-NIV78_RS28570;Name=NIV78_RS28570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28570 NZ_CP100137.1 Protein Homology CDS 2709311 2712298 . - 0 ID=cds-WP_251107716.1;Parent=gene-NIV78_RS28570;Dbxref=Genbank:WP_251107716.1;Name=WP_251107716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878175.1;locus_tag=NIV78_RS28570;product=EAL domain-containing protein;protein_id=WP_251107716.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2712489 2713106 . - . ID=gene-NIV78_RS28575;Name=NIV78_RS28575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28575 NZ_CP100137.1 Protein Homology CDS 2712489 2713106 . - 0 ID=cds-WP_015878176.1;Parent=gene-NIV78_RS28575;Dbxref=Genbank:WP_015878176.1;Name=WP_015878176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878176.1;locus_tag=NIV78_RS28575;product=hypothetical protein;protein_id=WP_015878176.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2713972 2714523 . + . ID=gene-NIV78_RS28580;Name=NIV78_RS28580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28580 NZ_CP100137.1 Protein Homology CDS 2713972 2714523 . + 0 ID=cds-WP_015878177.1;Parent=gene-NIV78_RS28580;Dbxref=Genbank:WP_015878177.1;Name=WP_015878177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004266659.1;locus_tag=NIV78_RS28580;product=hypothetical protein;protein_id=WP_015878177.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2714920 2717310 . - . ID=gene-NIV78_RS28585;Name=NIV78_RS28585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28585 NZ_CP100137.1 Protein Homology CDS 2714920 2717310 . - 0 ID=cds-WP_100555940.1;Parent=gene-NIV78_RS28585;Dbxref=Genbank:WP_100555940.1;Name=WP_100555940.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878178.1;locus_tag=NIV78_RS28585;product=GNAT family N-acetyltransferase;protein_id=WP_100555940.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2717899 2718189 . - . ID=gene-NIV78_RS28590;Name=NIV78_RS28590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28590 NZ_CP100137.1 Protein Homology CDS 2717899 2718189 . - 0 ID=cds-WP_015878179.1;Parent=gene-NIV78_RS28590;Dbxref=Genbank:WP_015878179.1;Name=WP_015878179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010110637.1;locus_tag=NIV78_RS28590;product=H-NS histone family protein;protein_id=WP_015878179.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2718291 2718578 . - . ID=gene-NIV78_RS28595;Name=NIV78_RS28595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28595 NZ_CP100137.1 Protein Homology CDS 2718291 2718578 . - 0 ID=cds-WP_015878180.1;Parent=gene-NIV78_RS28595;Dbxref=Genbank:WP_015878180.1;Name=WP_015878180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878180.1;locus_tag=NIV78_RS28595;product=hypothetical protein;protein_id=WP_015878180.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2719258 2719623 . + . ID=gene-NIV78_RS28600;Name=NIV78_RS28600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28600 NZ_CP100137.1 GeneMarkS-2+ CDS 2719258 2719623 . + 0 ID=cds-WP_157808600.1;Parent=gene-NIV78_RS28600;Dbxref=Genbank:WP_157808600.1;Name=WP_157808600.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS28600;product=hypothetical protein;protein_id=WP_157808600.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2719789 2721192 . + . ID=gene-NIV78_RS28605;Name=NIV78_RS28605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28605 NZ_CP100137.1 Protein Homology CDS 2719789 2721192 . + 0 ID=cds-WP_015878181.1;Parent=gene-NIV78_RS28605;Dbxref=Genbank:WP_015878181.1;Name=WP_015878181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757738.1;locus_tag=NIV78_RS28605;product=GntP family permease;protein_id=WP_015878181.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2721374 2721643 . + . ID=gene-NIV78_RS28610;Name=NIV78_RS28610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28610 NZ_CP100137.1 Protein Homology CDS 2721374 2721643 . + 0 ID=cds-WP_015878182.1;Parent=gene-NIV78_RS28610;Dbxref=Genbank:WP_015878182.1;Name=WP_015878182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480304.1;locus_tag=NIV78_RS28610;product=hypothetical protein;protein_id=WP_015878182.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2721818 2722807 . + . ID=gene-NIV78_RS28615;Name=NIV78_RS28615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28615 NZ_CP100137.1 Protein Homology CDS 2721818 2722807 . + 0 ID=cds-WP_015878183.1;Parent=gene-NIV78_RS28615;Dbxref=Genbank:WP_015878183.1;Name=WP_015878183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878183.1;locus_tag=NIV78_RS28615;product=DedA family protein/thiosulfate sulfurtransferase GlpE;protein_id=WP_015878183.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2722851 2724305 . - . ID=gene-NIV78_RS28620;Name=NIV78_RS28620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28620 NZ_CP100137.1 Protein Homology CDS 2722851 2724305 . - 0 ID=cds-WP_017923071.1;Parent=gene-NIV78_RS28620;Dbxref=Genbank:WP_017923071.1;Name=WP_017923071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004555191.1;locus_tag=NIV78_RS28620;product=OprD family outer membrane porin;protein_id=WP_017923071.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2724590 2725171 . - . ID=gene-NIV78_RS28625;Name=NIV78_RS28625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28625 NZ_CP100137.1 Protein Homology CDS 2724590 2725171 . - 0 ID=cds-WP_015878185.1;Parent=gene-NIV78_RS28625;Dbxref=Genbank:WP_015878185.1;Name=WP_015878185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900815.1;locus_tag=NIV78_RS28625;product=cupin domain-containing protein;protein_id=WP_015878185.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2725837 2727360 . + . ID=gene-NIV78_RS28630;Name=NIV78_RS28630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28630 NZ_CP100137.1 Protein Homology CDS 2725837 2727360 . + 0 ID=cds-WP_015878186.1;Parent=gene-NIV78_RS28630;Dbxref=Genbank:WP_015878186.1;Name=WP_015878186.1;Ontology_term=GO:0015833,GO:0015333,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=peptide:proton symporter activity|0015333||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878186.1;locus_tag=NIV78_RS28630;product=oligopeptide:H+ symporter;protein_id=WP_015878186.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2727463 2727669 . + . ID=gene-NIV78_RS28635;Name=NIV78_RS28635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28635 NZ_CP100137.1 Protein Homology CDS 2727463 2727669 . + 0 ID=cds-WP_015878187.1;Parent=gene-NIV78_RS28635;Dbxref=Genbank:WP_015878187.1;Name=WP_015878187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691640.1;locus_tag=NIV78_RS28635;product=hypothetical protein;protein_id=WP_015878187.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2727794 2728912 . - . ID=gene-NIV78_RS28640;Name=NIV78_RS28640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28640 NZ_CP100137.1 Protein Homology CDS 2727794 2728912 . - 0 ID=cds-WP_015878188.1;Parent=gene-NIV78_RS28640;Dbxref=Genbank:WP_015878188.1;Name=WP_015878188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878188.1;locus_tag=NIV78_RS28640;product=OpgC domain-containing protein;protein_id=WP_015878188.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2729356 2730252 . - . ID=gene-NIV78_RS28645;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=NIV78_RS28645 NZ_CP100137.1 Protein Homology CDS 2729356 2730252 . - 0 ID=cds-WP_017923692.1;Parent=gene-NIV78_RS28645;Dbxref=Genbank:WP_017923692.1;Name=WP_017923692.1;Ontology_term=GO:0006810,GO:0005215,GO:0005887;gbkey=CDS;gene=rarD;go_component=integral component of plasma membrane|0005887||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878189.1;locus_tag=NIV78_RS28645;product=EamA family transporter RarD;protein_id=WP_017923692.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2730266 2730562 . - . ID=gene-NIV78_RS28650;Name=NIV78_RS28650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28650 NZ_CP100137.1 Protein Homology CDS 2730266 2730562 . - 0 ID=cds-WP_015878190.1;Parent=gene-NIV78_RS28650;Dbxref=Genbank:WP_015878190.1;Name=WP_015878190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009950731.1;locus_tag=NIV78_RS28650;product=acylphosphatase;protein_id=WP_015878190.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2730731 2731741 . + . ID=gene-NIV78_RS28655;Name=NIV78_RS28655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28655 NZ_CP100137.1 Protein Homology CDS 2730731 2731741 . + 0 ID=cds-WP_015878191.1;Parent=gene-NIV78_RS28655;Dbxref=Genbank:WP_015878191.1;Name=WP_015878191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013092810.1;locus_tag=NIV78_RS28655;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_015878191.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2732024 2733409 . + . ID=gene-NIV78_RS28660;Name=NIV78_RS28660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28660 NZ_CP100137.1 Protein Homology CDS 2732024 2733409 . + 0 ID=cds-WP_251107715.1;Parent=gene-NIV78_RS28660;Dbxref=Genbank:WP_251107715.1;Name=WP_251107715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878192.1;locus_tag=NIV78_RS28660;product=hypothetical protein;protein_id=WP_251107715.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2733522 2734709 . - . ID=gene-NIV78_RS28665;Name=NIV78_RS28665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28665 NZ_CP100137.1 Protein Homology CDS 2733522 2734709 . - 0 ID=cds-WP_015878193.1;Parent=gene-NIV78_RS28665;Dbxref=Genbank:WP_015878193.1;Name=WP_015878193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523399.1;locus_tag=NIV78_RS28665;product=glycosyltransferase;protein_id=WP_015878193.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2735065 2736006 . + . ID=gene-NIV78_RS28670;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=NIV78_RS28670 NZ_CP100137.1 Protein Homology CDS 2735065 2736006 . + 0 ID=cds-WP_015878194.1;Parent=gene-NIV78_RS28670;Dbxref=Genbank:WP_015878194.1;Name=WP_015878194.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009894247.1;locus_tag=NIV78_RS28670;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_015878194.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2736019 2737179 . + . ID=gene-NIV78_RS28675;Name=hpnH;gbkey=Gene;gene=hpnH;gene_biotype=protein_coding;locus_tag=NIV78_RS28675 NZ_CP100137.1 Protein Homology CDS 2736019 2737179 . + 0 ID=cds-WP_015878195.1;Parent=gene-NIV78_RS28675;Dbxref=Genbank:WP_015878195.1;Name=WP_015878195.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;gene=hpnH;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878195.1;locus_tag=NIV78_RS28675;product=adenosyl-hopene transferase HpnH;protein_id=WP_015878195.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2737561 2738148 . + . ID=gene-NIV78_RS28680;Name=NIV78_RS28680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28680 NZ_CP100137.1 Protein Homology CDS 2737561 2738148 . + 0 ID=cds-WP_017923732.1;Parent=gene-NIV78_RS28680;Dbxref=Genbank:WP_017923732.1;Name=WP_017923732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878196.1;locus_tag=NIV78_RS28680;product=chromate transporter;protein_id=WP_017923732.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2738160 2738696 . + . ID=gene-NIV78_RS28685;Name=NIV78_RS28685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28685 NZ_CP100137.1 Protein Homology CDS 2738160 2738696 . + 0 ID=cds-WP_015878197.1;Parent=gene-NIV78_RS28685;Dbxref=Genbank:WP_015878197.1;Name=WP_015878197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878197.1;locus_tag=NIV78_RS28685;product=chromate transporter;protein_id=WP_015878197.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2738890 2739171 . + . ID=gene-NIV78_RS28690;Name=NIV78_RS28690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28690 NZ_CP100137.1 Protein Homology CDS 2738890 2739171 . + 0 ID=cds-WP_015878198.1;Parent=gene-NIV78_RS28690;Dbxref=Genbank:WP_015878198.1;Name=WP_015878198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691654.1;locus_tag=NIV78_RS28690;product=hypothetical protein;protein_id=WP_015878198.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2739234 2739509 . - . ID=gene-NIV78_RS28695;Name=NIV78_RS28695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28695 NZ_CP100137.1 GeneMarkS-2+ CDS 2739234 2739509 . - 0 ID=cds-WP_127913875.1;Parent=gene-NIV78_RS28695;Dbxref=Genbank:WP_127913875.1;Name=WP_127913875.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS28695;product=hypothetical protein;protein_id=WP_127913875.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2739553 2739759 . - . ID=gene-NIV78_RS28700;Name=NIV78_RS28700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28700 NZ_CP100137.1 Protein Homology CDS 2739553 2739759 . - 0 ID=cds-WP_015878199.1;Parent=gene-NIV78_RS28700;Dbxref=Genbank:WP_015878199.1;Name=WP_015878199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523392.1;locus_tag=NIV78_RS28700;product=YbdD/YjiX family protein;protein_id=WP_015878199.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2739774 2741852 . - . ID=gene-NIV78_RS28705;Name=NIV78_RS28705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28705 NZ_CP100137.1 Protein Homology CDS 2739774 2741852 . - 0 ID=cds-WP_015878200.1;Parent=gene-NIV78_RS28705;Dbxref=Genbank:WP_015878200.1;Name=WP_015878200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603803.1;locus_tag=NIV78_RS28705;product=carbon starvation protein A;protein_id=WP_015878200.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2742596 2743756 . + . ID=gene-NIV78_RS28710;Name=NIV78_RS28710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28710 NZ_CP100137.1 Protein Homology CDS 2742596 2743756 . + 0 ID=cds-WP_015878201.1;Parent=gene-NIV78_RS28710;Dbxref=Genbank:WP_015878201.1;Name=WP_015878201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884367.1;locus_tag=NIV78_RS28710;product=porin;protein_id=WP_015878201.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2743833 2744471 . - . ID=gene-NIV78_RS28715;Name=NIV78_RS28715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28715 NZ_CP100137.1 Protein Homology CDS 2743833 2744471 . - 0 ID=cds-WP_015878202.1;Parent=gene-NIV78_RS28715;Dbxref=Genbank:WP_015878202.1;Name=WP_015878202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878202.1;locus_tag=NIV78_RS28715;product=LysE family translocator;protein_id=WP_015878202.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2745237 2746406 . + . ID=gene-NIV78_RS28720;Name=NIV78_RS28720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28720 NZ_CP100137.1 Protein Homology CDS 2745237 2746406 . + 0 ID=cds-WP_017423356.1;Parent=gene-NIV78_RS28720;Dbxref=Genbank:WP_017423356.1;Name=WP_017423356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884367.1;locus_tag=NIV78_RS28720;product=porin;protein_id=WP_017423356.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2746531 2748399 . - . ID=gene-NIV78_RS28725;Name=NIV78_RS28725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28725 NZ_CP100137.1 Protein Homology CDS 2746531 2748399 . - 0 ID=cds-WP_251107713.1;Parent=gene-NIV78_RS28725;Dbxref=Genbank:WP_251107713.1;Name=WP_251107713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878204.1;locus_tag=NIV78_RS28725;product=prolyl oligopeptidase family serine peptidase;protein_id=WP_251107713.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2748368 2749558 . - . ID=gene-NIV78_RS28730;Name=pqqE;gbkey=Gene;gene=pqqE;gene_biotype=protein_coding;locus_tag=NIV78_RS28730 NZ_CP100137.1 Protein Homology CDS 2748368 2749558 . - 0 ID=cds-WP_257757659.1;Parent=gene-NIV78_RS28730;Dbxref=Genbank:WP_257757659.1;Name=WP_257757659.1;Ontology_term=GO:0018149,GO:0018189;gbkey=CDS;gene=pqqE;go_process=peptide cross-linking|0018149||IEA,pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423358.1;locus_tag=NIV78_RS28730;product=pyrroloquinoline quinone biosynthesis protein PqqE;protein_id=WP_257757659.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2749563 2749838 . - . ID=gene-NIV78_RS28735;Name=pqqD;gbkey=Gene;gene=pqqD;gene_biotype=protein_coding;locus_tag=NIV78_RS28735 NZ_CP100137.1 Protein Homology CDS 2749563 2749838 . - 0 ID=cds-WP_017423359.1;Parent=gene-NIV78_RS28735;Dbxref=Genbank:WP_017423359.1;Name=WP_017423359.1;Ontology_term=GO:0018189,GO:0048038;gbkey=CDS;gene=pqqD;go_function=quinone binding|0048038||IEA;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878206.1;locus_tag=NIV78_RS28735;product=pyrroloquinoline quinone biosynthesis peptide chaperone PqqD;protein_id=WP_017423359.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2749838 2750596 . - . ID=gene-NIV78_RS28740;Name=pqqC;gbkey=Gene;gene=pqqC;gene_biotype=protein_coding;locus_tag=NIV78_RS28740 NZ_CP100137.1 Protein Homology CDS 2749838 2750596 . - 0 ID=cds-WP_015878207.1;Parent=gene-NIV78_RS28740;Dbxref=Genbank:WP_015878207.1;Name=WP_015878207.1;Ontology_term=GO:0018189;gbkey=CDS;gene=pqqC;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878207.1;locus_tag=NIV78_RS28740;product=pyrroloquinoline-quinone synthase PqqC;protein_id=WP_015878207.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2750654 2751565 . - . ID=gene-NIV78_RS28745;Name=pqqB;gbkey=Gene;gene=pqqB;gene_biotype=protein_coding;locus_tag=NIV78_RS28745 NZ_CP100137.1 Protein Homology CDS 2750654 2751565 . - 0 ID=cds-WP_017923647.1;Parent=gene-NIV78_RS28745;Dbxref=Genbank:WP_017923647.1;Name=WP_017923647.1;Ontology_term=GO:0018189;gbkey=CDS;gene=pqqB;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423360.1;locus_tag=NIV78_RS28745;product=pyrroloquinoline quinone biosynthesis protein PqqB;protein_id=WP_017923647.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2752055 2752330 . + . ID=gene-NIV78_RS28750;Name=NIV78_RS28750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28750 NZ_CP100137.1 Protein Homology CDS 2752055 2752330 . + 0 ID=cds-WP_017423362.1;Parent=gene-NIV78_RS28750;Dbxref=Genbank:WP_017423362.1;Name=WP_017423362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423362.1;locus_tag=NIV78_RS28750;product=DUF2164 domain-containing protein;protein_id=WP_017423362.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2752730 2752879 . - . ID=gene-NIV78_RS28755;Name=NIV78_RS28755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28755 NZ_CP100137.1 Protein Homology CDS 2752730 2752879 . - 0 ID=cds-WP_017433441.1;Parent=gene-NIV78_RS28755;Dbxref=Genbank:WP_017433441.1;Name=WP_017433441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489171.1;locus_tag=NIV78_RS28755;product=hypothetical protein;protein_id=WP_017433441.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2753131 2755788 . - . ID=gene-NIV78_RS28760;Name=NIV78_RS28760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28760 NZ_CP100137.1 Protein Homology CDS 2753131 2755788 . - 0 ID=cds-WP_251107712.1;Parent=gene-NIV78_RS28760;Dbxref=Genbank:WP_251107712.1;Name=WP_251107712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878210.1;locus_tag=NIV78_RS28760;product=transglycosylase domain-containing protein;protein_id=WP_251107712.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2755903 2759019 . - . ID=gene-NIV78_RS28765;Name=NIV78_RS28765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28765 NZ_CP100137.1 Protein Homology CDS 2755903 2759019 . - 0 ID=cds-WP_124836681.1;Parent=gene-NIV78_RS28765;Dbxref=Genbank:WP_124836681.1;Name=WP_124836681.1;Ontology_term=GO:0042908,GO:0055085,GO:0015562,GO:0016021;gbkey=CDS;go_component=integral component of membrane|0016021||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878211.1;locus_tag=NIV78_RS28765;product=multidrug efflux RND transporter permease subunit;protein_id=WP_124836681.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2759029 2759601 . - . ID=gene-NIV78_RS28770;Name=NIV78_RS28770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28770 NZ_CP100137.1 Protein Homology CDS 2759029 2759601 . - 0 ID=cds-WP_124836682.1;Parent=gene-NIV78_RS28770;Dbxref=Genbank:WP_124836682.1;Name=WP_124836682.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878212.1;locus_tag=NIV78_RS28770;product=GNAT family N-acetyltransferase;protein_id=WP_124836682.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2759598 2760254 . - . ID=gene-NIV78_RS28775;Name=NIV78_RS28775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28775 NZ_CP100137.1 Protein Homology CDS 2759598 2760254 . - 0 ID=cds-WP_015878213.1;Parent=gene-NIV78_RS28775;Dbxref=Genbank:WP_015878213.1;Name=WP_015878213.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011853989.1;locus_tag=NIV78_RS28775;product=GNAT family N-acetyltransferase;protein_id=WP_015878213.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2760251 2761627 . - . ID=gene-NIV78_RS28780;Name=NIV78_RS28780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28780 NZ_CP100137.1 Protein Homology CDS 2760251 2761627 . - 0 ID=cds-WP_257757663.1;Parent=gene-NIV78_RS28780;Dbxref=Genbank:WP_257757663.1;Name=WP_257757663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878214.1;locus_tag=NIV78_RS28780;product=metallopeptidase TldD-related protein;protein_id=WP_257757663.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2761627 2763060 . - . ID=gene-NIV78_RS28785;Name=NIV78_RS28785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28785 NZ_CP100137.1 Protein Homology CDS 2761627 2763060 . - 0 ID=cds-WP_100555925.1;Parent=gene-NIV78_RS28785;Dbxref=Genbank:WP_100555925.1;Name=WP_100555925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532569.1;locus_tag=NIV78_RS28785;product=TldD/PmbA family protein;protein_id=WP_100555925.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2763057 2764685 . - . ID=gene-NIV78_RS28790;Name=NIV78_RS28790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28790 NZ_CP100137.1 Protein Homology CDS 2763057 2764685 . - 0 ID=cds-WP_017923567.1;Parent=gene-NIV78_RS28790;Dbxref=Genbank:WP_017923567.1;Name=WP_017923567.1;Ontology_term=GO:0015833,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878216.1;locus_tag=NIV78_RS28790;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_017923567.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2764685 2765794 . - . ID=gene-NIV78_RS28795;Name=NIV78_RS28795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28795 NZ_CP100137.1 Protein Homology CDS 2764685 2765794 . - 0 ID=cds-WP_015878217.1;Parent=gene-NIV78_RS28795;Dbxref=Genbank:WP_015878217.1;Name=WP_015878217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006475985.1;locus_tag=NIV78_RS28795;product=ABC transporter permease;protein_id=WP_015878217.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2765748 2766800 . - . ID=gene-NIV78_RS28800;Name=NIV78_RS28800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28800 NZ_CP100137.1 Protein Homology CDS 2765748 2766800 . - 0 ID=cds-WP_015878218.1;Parent=gene-NIV78_RS28800;Dbxref=Genbank:WP_015878218.1;Name=WP_015878218.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006475984.1;locus_tag=NIV78_RS28800;product=ABC transporter permease subunit;protein_id=WP_015878218.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2766805 2768730 . - . ID=gene-NIV78_RS28805;Name=NIV78_RS28805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28805 NZ_CP100137.1 Protein Homology CDS 2766805 2768730 . - 0 ID=cds-WP_251107711.1;Parent=gene-NIV78_RS28805;Dbxref=Genbank:WP_251107711.1;Name=WP_251107711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878219.1;locus_tag=NIV78_RS28805;product=ABC transporter substrate-binding protein;protein_id=WP_251107711.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2768858 2771614 . - . ID=gene-NIV78_RS28810;Name=NIV78_RS28810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28810 NZ_CP100137.1 Protein Homology CDS 2768858 2771614 . - 0 ID=cds-WP_015878220.1;Parent=gene-NIV78_RS28810;Dbxref=Genbank:WP_015878220.1;Name=WP_015878220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882236.1;locus_tag=NIV78_RS28810;product=TonB-dependent receptor;protein_id=WP_015878220.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2771915 2772490 . - . ID=gene-NIV78_RS28815;Name=NIV78_RS28815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28815 NZ_CP100137.1 Protein Homology CDS 2771915 2772490 . - 0 ID=cds-WP_015878221.1;Parent=gene-NIV78_RS28815;Dbxref=Genbank:WP_015878221.1;Name=WP_015878221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878221.1;locus_tag=NIV78_RS28815;product=XRE family transcriptional regulator;protein_id=WP_015878221.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2772516 2773709 . - . ID=gene-NIV78_RS28820;Name=NIV78_RS28820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28820 NZ_CP100137.1 Protein Homology CDS 2772516 2773709 . - 0 ID=cds-WP_257757666.1;Parent=gene-NIV78_RS28820;Dbxref=Genbank:WP_257757666.1;Name=WP_257757666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878222.1;locus_tag=NIV78_RS28820;product=hypothetical protein;protein_id=WP_257757666.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2773726 2774154 . - . ID=gene-NIV78_RS28825;Name=NIV78_RS28825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28825 NZ_CP100137.1 Protein Homology CDS 2773726 2774154 . - 0 ID=cds-WP_015878223.1;Parent=gene-NIV78_RS28825;Dbxref=Genbank:WP_015878223.1;Name=WP_015878223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328556.1;locus_tag=NIV78_RS28825;product=biopolymer transporter ExbD;protein_id=WP_015878223.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2774171 2774593 . - . ID=gene-NIV78_RS28830;Name=NIV78_RS28830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28830 NZ_CP100137.1 Protein Homology CDS 2774171 2774593 . - 0 ID=cds-WP_015878224.1;Parent=gene-NIV78_RS28830;Dbxref=Genbank:WP_015878224.1;Name=WP_015878224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017777874.1;locus_tag=NIV78_RS28830;product=biopolymer transporter ExbD;protein_id=WP_015878224.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2774607 2775518 . - . ID=gene-NIV78_RS28835;Name=NIV78_RS28835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28835 NZ_CP100137.1 Protein Homology CDS 2774607 2775518 . - 0 ID=cds-WP_100555923.1;Parent=gene-NIV78_RS28835;Dbxref=Genbank:WP_100555923.1;Name=WP_100555923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691706.1;locus_tag=NIV78_RS28835;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_100555923.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2775614 2776309 . - . ID=gene-NIV78_RS28840;Name=NIV78_RS28840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28840 NZ_CP100137.1 Protein Homology CDS 2775614 2776309 . - 0 ID=cds-WP_015878226.1;Parent=gene-NIV78_RS28840;Dbxref=Genbank:WP_015878226.1;Name=WP_015878226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481523.1;locus_tag=NIV78_RS28840;product=energy transducer TonB;protein_id=WP_015878226.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2776611 2777021 . + . ID=gene-NIV78_RS28845;Name=NIV78_RS28845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28845 NZ_CP100137.1 GeneMarkS-2+ CDS 2776611 2777021 . + 0 ID=cds-WP_124836683.1;Parent=gene-NIV78_RS28845;Dbxref=Genbank:WP_124836683.1;Name=WP_124836683.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS28845;product=hypothetical protein;protein_id=WP_124836683.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2777254 2779083 . + . ID=gene-NIV78_RS28850;Name=NIV78_RS28850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28850 NZ_CP100137.1 Protein Homology CDS 2777254 2779083 . + 0 ID=cds-WP_171466930.1;Parent=gene-NIV78_RS28850;Dbxref=Genbank:WP_171466930.1;Name=WP_171466930.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878227.1;locus_tag=NIV78_RS28850;product=response regulator;protein_id=WP_171466930.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2779080 2779490 . + . ID=gene-NIV78_RS28855;Name=NIV78_RS28855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28855 NZ_CP100137.1 Protein Homology CDS 2779080 2779490 . + 0 ID=cds-WP_015878228.1;Parent=gene-NIV78_RS28855;Dbxref=Genbank:WP_015878228.1;Name=WP_015878228.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878228.1;locus_tag=NIV78_RS28855;product=response regulator;protein_id=WP_015878228.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2779462 2779842 . + . ID=gene-NIV78_RS28860;Name=NIV78_RS28860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28860 NZ_CP100137.1 Protein Homology CDS 2779462 2779842 . + 0 ID=cds-WP_015878229.1;Parent=gene-NIV78_RS28860;Dbxref=Genbank:WP_015878229.1;Name=WP_015878229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878229.1;locus_tag=NIV78_RS28860;product=hypothetical protein;protein_id=WP_015878229.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2779922 2780260 . + . ID=gene-NIV78_RS28865;Name=NIV78_RS28865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28865 NZ_CP100137.1 Protein Homology CDS 2779922 2780260 . + 0 ID=cds-WP_015878230.1;Parent=gene-NIV78_RS28865;Dbxref=Genbank:WP_015878230.1;Name=WP_015878230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691711.1;locus_tag=NIV78_RS28865;product=STAS domain-containing protein;protein_id=WP_015878230.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2780439 2781320 . + . ID=gene-NIV78_RS28870;Name=NIV78_RS28870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28870 NZ_CP100137.1 Protein Homology CDS 2780439 2781320 . + 0 ID=cds-WP_015878231.1;Parent=gene-NIV78_RS28870;Dbxref=Genbank:WP_015878231.1;Name=WP_015878231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878231.1;locus_tag=NIV78_RS28870;product=ABC transporter substrate-binding protein;protein_id=WP_015878231.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2781317 2784358 . + . ID=gene-NIV78_RS28875;Name=NIV78_RS28875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28875 NZ_CP100137.1 Protein Homology CDS 2781317 2784358 . + 0 ID=cds-WP_124836685.1;Parent=gene-NIV78_RS28875;Dbxref=Genbank:WP_124836685.1;Name=WP_124836685.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878232.1;locus_tag=NIV78_RS28875;product=SpoIIE family protein phosphatase;protein_id=WP_124836685.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2784887 2785912 . + . ID=gene-NIV78_RS28880;Name=NIV78_RS28880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28880 NZ_CP100137.1 Protein Homology CDS 2784887 2785912 . + 0 ID=cds-WP_015878233.1;Parent=gene-NIV78_RS28880;Dbxref=Genbank:WP_015878233.1;Name=WP_015878233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691714.1;locus_tag=NIV78_RS28880;product=glycosyltransferase family 2 protein;protein_id=WP_015878233.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2785854 2787029 . + . ID=gene-NIV78_RS28885;Name=NIV78_RS28885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28885 NZ_CP100137.1 Protein Homology CDS 2785854 2787029 . + 0 ID=cds-WP_232734534.1;Parent=gene-NIV78_RS28885;Dbxref=Genbank:WP_232734534.1;Name=WP_232734534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878234.1;locus_tag=NIV78_RS28885;product=glycosyltransferase;protein_id=WP_232734534.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2787094 2787783 . - . ID=gene-NIV78_RS28890;Name=NIV78_RS28890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28890 NZ_CP100137.1 Protein Homology CDS 2787094 2787783 . - 0 ID=cds-WP_015878235.1;Parent=gene-NIV78_RS28890;Dbxref=Genbank:WP_015878235.1;Name=WP_015878235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878235.1;locus_tag=NIV78_RS28890;product=response regulator transcription factor;protein_id=WP_015878235.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2788102 2789499 . + . ID=gene-NIV78_RS28895;Name=NIV78_RS28895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28895 NZ_CP100137.1 Protein Homology CDS 2788102 2789499 . + 0 ID=cds-WP_015878236.1;Parent=gene-NIV78_RS28895;Dbxref=Genbank:WP_015878236.1;Name=WP_015878236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878236.1;locus_tag=NIV78_RS28895;product=cache domain-containing protein;protein_id=WP_015878236.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2789496 2790176 . + . ID=gene-NIV78_RS28900;Name=NIV78_RS28900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28900 NZ_CP100137.1 Protein Homology CDS 2789496 2790176 . + 0 ID=cds-WP_017924340.1;Parent=gene-NIV78_RS28900;Dbxref=Genbank:WP_017924340.1;Name=WP_017924340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878237.1;locus_tag=NIV78_RS28900;product=response regulator transcription factor;protein_id=WP_017924340.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2790412 2791008 . - . ID=gene-NIV78_RS28905;Name=NIV78_RS28905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28905 NZ_CP100137.1 Protein Homology CDS 2790412 2791008 . - 0 ID=cds-WP_015878238.1;Parent=gene-NIV78_RS28905;Dbxref=Genbank:WP_015878238.1;Name=WP_015878238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009894421.1;locus_tag=NIV78_RS28905;product=ABC transporter substrate-binding protein;protein_id=WP_015878238.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2791335 2793965 . + . ID=gene-NIV78_RS28910;Name=NIV78_RS28910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28910 NZ_CP100137.1 Protein Homology CDS 2791335 2793965 . + 0 ID=cds-WP_015878239.1;Parent=gene-NIV78_RS28910;Dbxref=Genbank:WP_015878239.1;Name=WP_015878239.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878239.1;locus_tag=NIV78_RS28910;product=MMPL family transporter;protein_id=WP_015878239.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2793958 2794953 . + . ID=gene-NIV78_RS28915;Name=NIV78_RS28915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28915 NZ_CP100137.1 Protein Homology CDS 2793958 2794953 . + 0 ID=cds-WP_251107708.1;Parent=gene-NIV78_RS28915;Dbxref=Genbank:WP_251107708.1;Name=WP_251107708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878240.1;locus_tag=NIV78_RS28915;product=MlaA family lipoprotein;protein_id=WP_251107708.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2794993 2795556 . - . ID=gene-NIV78_RS28920;Name=NIV78_RS28920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28920 NZ_CP100137.1 Protein Homology CDS 2794993 2795556 . - 0 ID=cds-WP_015878241.1;Parent=gene-NIV78_RS28920;Dbxref=Genbank:WP_015878241.1;Name=WP_015878241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691723.1;locus_tag=NIV78_RS28920;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_015878241.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2795733 2797079 . - . ID=gene-NIV78_RS28925;Name=NIV78_RS28925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28925 NZ_CP100137.1 Protein Homology CDS 2795733 2797079 . - 0 ID=cds-WP_017924213.1;Parent=gene-NIV78_RS28925;Dbxref=Genbank:WP_017924213.1;Name=WP_017924213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423664.1;locus_tag=NIV78_RS28925;product=aspartate aminotransferase family protein;protein_id=WP_017924213.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2797150 2798184 . - . ID=gene-NIV78_RS28930;Name=NIV78_RS28930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28930 NZ_CP100137.1 Protein Homology CDS 2797150 2798184 . - 0 ID=cds-WP_017924214.1;Parent=gene-NIV78_RS28930;Dbxref=Genbank:WP_017924214.1;Name=WP_017924214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878243.1;locus_tag=NIV78_RS28930;product=C45 family autoproteolytic acyltransferase/hydolase;protein_id=WP_017924214.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2798441 2799148 . - . ID=gene-NIV78_RS28935;Name=NIV78_RS28935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28935 NZ_CP100137.1 Protein Homology CDS 2798441 2799148 . - 0 ID=cds-WP_015878244.1;Parent=gene-NIV78_RS28935;Dbxref=Genbank:WP_015878244.1;Name=WP_015878244.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691726.1;locus_tag=NIV78_RS28935;product=phosphorylase;protein_id=WP_015878244.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2799149 2801539 . - . ID=gene-NIV78_RS28940;Name=shc;gbkey=Gene;gene=shc;gene_biotype=protein_coding;locus_tag=NIV78_RS28940 NZ_CP100137.1 Protein Homology CDS 2799149 2801539 . - 0 ID=cds-WP_257757674.1;Parent=gene-NIV78_RS28940;Dbxref=Genbank:WP_257757674.1;Name=WP_257757674.1;Ontology_term=GO:0019746,GO:0051007;gbkey=CDS;gene=shc;go_function=squalene-hopene cyclase activity|0051007||IEA;go_process=hopanoid biosynthetic process|0019746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878245.1;locus_tag=NIV78_RS28940;product=squalene--hopene cyclase;protein_id=WP_257757674.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2801894 2802742 . - . ID=gene-NIV78_RS28945;Name=hpnD;gbkey=Gene;gene=hpnD;gene_biotype=protein_coding;locus_tag=NIV78_RS28945 NZ_CP100137.1 Protein Homology CDS 2801894 2802742 . - 0 ID=cds-WP_015878246.1;Parent=gene-NIV78_RS28945;Dbxref=Genbank:WP_015878246.1;Name=WP_015878246.1;Ontology_term=GO:0016117,GO:0016767;gbkey=CDS;gene=hpnD;go_function=geranylgeranyl-diphosphate geranylgeranyltransferase activity|0016767||IEA;go_process=carotenoid biosynthetic process|0016117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004555241.1;locus_tag=NIV78_RS28945;product=presqualene diphosphate synthase HpnD;protein_id=WP_015878246.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2802933 2803265 . - . ID=gene-NIV78_RS28950;Name=NIV78_RS28950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28950 NZ_CP100137.1 Protein Homology CDS 2802933 2803265 . - 0 ID=cds-WP_015878247.1;Parent=gene-NIV78_RS28950;Dbxref=Genbank:WP_015878247.1;Name=WP_015878247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878247.1;locus_tag=NIV78_RS28950;product=hypothetical protein;protein_id=WP_015878247.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2803670 2804593 . + . ID=gene-NIV78_RS28955;Name=NIV78_RS28955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28955 NZ_CP100137.1 Protein Homology CDS 2803670 2804593 . + 0 ID=cds-WP_017923685.1;Parent=gene-NIV78_RS28955;Dbxref=Genbank:WP_017923685.1;Name=WP_017923685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424573.1;locus_tag=NIV78_RS28955;product=alpha/beta fold hydrolase;protein_id=WP_017923685.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2804800 2807088 . + . ID=gene-NIV78_RS28960;Name=NIV78_RS28960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28960 NZ_CP100137.1 Protein Homology CDS 2804800 2807088 . + 0 ID=cds-WP_251107922.1;Parent=gene-NIV78_RS28960;Dbxref=Genbank:WP_251107922.1;Name=WP_251107922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878249.1;locus_tag=NIV78_RS28960;product=ATP-binding protein;protein_id=WP_251107922.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2807177 2807737 . - . ID=gene-NIV78_RS28965;Name=NIV78_RS28965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28965 NZ_CP100137.1 Protein Homology CDS 2807177 2807737 . - 0 ID=cds-WP_015878250.1;Parent=gene-NIV78_RS28965;Dbxref=Genbank:WP_015878250.1;Name=WP_015878250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878250.1;locus_tag=NIV78_RS28965;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_015878250.1;transl_table=11 NZ_CP100137.1 RefSeq gene 2808103 2808468 . - . ID=gene-NIV78_RS28970;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=NIV78_RS28970 NZ_CP100137.1 Protein Homology CDS 2808103 2808468 . - 0 ID=cds-WP_035979475.1;Parent=gene-NIV78_RS28970;Dbxref=Genbank:WP_035979475.1;Name=WP_035979475.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009901857.1;locus_tag=NIV78_RS28970;product=arsenate reductase (glutaredoxin);protein_id=WP_035979475.1;transl_table=11 ##sequence-region NZ_CP100138.1 1 204816 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=337 NZ_CP100138.1 RefSeq region 1 204816 . + . ID=NZ_CP100138.1:1..204816;Dbxref=taxon:337;Is_circular=true;Name=pr931p;collection-date=2018;country=South Korea: Taean-gun;gbkey=Src;genome=plasmid;mol_type=genomic DNA;plasmid-name=pr931p;strain=R93 NZ_CP100138.1 RefSeq gene 101 772 . + . ID=gene-NIV78_RS28975;Name=NIV78_RS28975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28975 NZ_CP100138.1 Protein Homology CDS 101 772 . + 0 ID=cds-WP_012734035.1;Parent=gene-NIV78_RS28975;Dbxref=Genbank:WP_012734035.1;Name=WP_012734035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749798.1;locus_tag=NIV78_RS28975;product=AAA family ATPase;protein_id=WP_012734035.1;transl_table=11 NZ_CP100138.1 RefSeq gene 772 1737 . + . ID=gene-NIV78_RS28980;Name=NIV78_RS28980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28980 NZ_CP100138.1 Protein Homology CDS 772 1737 . + 0 ID=cds-WP_012734036.1;Parent=gene-NIV78_RS28980;Dbxref=Genbank:WP_012734036.1;Name=WP_012734036.1;Ontology_term=GO:0000910,GO:0007059,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cytokinesis|0000910||IEA,chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734036.1;locus_tag=NIV78_RS28980;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_012734036.1;transl_table=11 NZ_CP100138.1 RefSeq gene 2492 3349 . + . ID=gene-NIV78_RS28985;Name=trfA;gbkey=Gene;gene=trfA;gene_biotype=protein_coding;locus_tag=NIV78_RS28985 NZ_CP100138.1 Protein Homology CDS 2492 3349 . + 0 ID=cds-WP_012734037.1;Parent=gene-NIV78_RS28985;Dbxref=Genbank:WP_012734037.1;Name=WP_012734037.1;gbkey=CDS;gene=trfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482109.1;locus_tag=NIV78_RS28985;product=plasmid replication initiator TrfA;protein_id=WP_012734037.1;transl_table=11 NZ_CP100138.1 RefSeq gene 5030 5929 . - . ID=gene-NIV78_RS28990;Name=NIV78_RS28990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28990 NZ_CP100138.1 Protein Homology CDS 5030 5929 . - 0 ID=cds-WP_257758098.1;Parent=gene-NIV78_RS28990;Dbxref=Genbank:WP_257758098.1;Name=WP_257758098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732804.1;locus_tag=NIV78_RS28990;product=Crp/Fnr family transcriptional regulator;protein_id=WP_257758098.1;transl_table=11 NZ_CP100138.1 RefSeq gene 6347 7684 . - . ID=gene-NIV78_RS28995;Name=NIV78_RS28995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS28995 NZ_CP100138.1 Protein Homology CDS 6347 7684 . - 0 ID=cds-WP_017432354.1;Parent=gene-NIV78_RS28995;Dbxref=Genbank:WP_017432354.1;Name=WP_017432354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424105.1;locus_tag=NIV78_RS28995;product=DUF1173 domain-containing protein;protein_id=WP_017432354.1;transl_table=11 NZ_CP100138.1 RefSeq gene 7698 8117 . - . ID=gene-NIV78_RS29000;Name=NIV78_RS29000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29000 NZ_CP100138.1 Protein Homology CDS 7698 8117 . - 0 ID=cds-WP_017432355.1;Parent=gene-NIV78_RS29000;Dbxref=Genbank:WP_017432355.1;Name=WP_017432355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424104.1;locus_tag=NIV78_RS29000;product=hypothetical protein;protein_id=WP_017432355.1;transl_table=11 NZ_CP100138.1 RefSeq gene 8114 8767 . - . ID=gene-NIV78_RS29005;Name=NIV78_RS29005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29005 NZ_CP100138.1 Protein Homology CDS 8114 8767 . - 0 ID=cds-WP_012732807.1;Parent=gene-NIV78_RS29005;Dbxref=Genbank:WP_012732807.1;Name=WP_012732807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732807.1;locus_tag=NIV78_RS29005;product=hypothetical protein;protein_id=WP_012732807.1;transl_table=11 NZ_CP100138.1 RefSeq gene 8784 12938 . - . ID=gene-NIV78_RS29010;Name=NIV78_RS29010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29010 NZ_CP100138.1 Protein Homology CDS 8784 12938 . - 0 ID=cds-WP_257758100.1;Parent=gene-NIV78_RS29010;Dbxref=Genbank:WP_257758100.1;Name=WP_257758100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735269.1;locus_tag=NIV78_RS29010;product=YadA-like family protein;protein_id=WP_257758100.1;transl_table=11 NZ_CP100138.1 RefSeq gene 13063 13686 . - . ID=gene-NIV78_RS29015;Name=NIV78_RS29015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29015 NZ_CP100138.1 Protein Homology CDS 13063 13686 . - 0 ID=cds-WP_012732809.1;Parent=gene-NIV78_RS29015;Dbxref=Genbank:WP_012732809.1;Name=WP_012732809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735270.1;locus_tag=NIV78_RS29015;product=hypothetical protein;protein_id=WP_012732809.1;transl_table=11 NZ_CP100138.1 RefSeq gene 13683 14000 . - . ID=gene-NIV78_RS29020;Name=NIV78_RS29020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29020 NZ_CP100138.1 Protein Homology CDS 13683 14000 . - 0 ID=cds-WP_012732810.1;Parent=gene-NIV78_RS29020;Dbxref=Genbank:WP_012732810.1;Name=WP_012732810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735271.1;locus_tag=NIV78_RS29020;product=hypothetical protein;protein_id=WP_012732810.1;transl_table=11 NZ_CP100138.1 RefSeq gene 13997 14440 . - . ID=gene-NIV78_RS29025;Name=NIV78_RS29025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29025 NZ_CP100138.1 Protein Homology CDS 13997 14440 . - 0 ID=cds-WP_230674406.1;Parent=gene-NIV78_RS29025;Dbxref=Genbank:WP_230674406.1;Name=WP_230674406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735272.1;locus_tag=NIV78_RS29025;product=protein-disulfide reductase DsbD family protein;protein_id=WP_230674406.1;transl_table=11 NZ_CP100138.1 RefSeq gene 14479 14910 . - . ID=gene-NIV78_RS29030;Name=NIV78_RS29030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29030 NZ_CP100138.1 GeneMarkS-2+ CDS 14479 14910 . - 0 ID=cds-WP_017432893.1;Parent=gene-NIV78_RS29030;Dbxref=Genbank:WP_017432893.1;Name=WP_017432893.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS29030;product=hypothetical protein;protein_id=WP_017432893.1;transl_table=11 NZ_CP100138.1 RefSeq gene 15067 15465 . - . ID=gene-NIV78_RS29035;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=NIV78_RS29035 NZ_CP100138.1 Protein Homology CDS 15067 15465 . - 0 ID=cds-WP_012732812.1;Parent=gene-NIV78_RS29035;Dbxref=Genbank:WP_012732812.1;Name=WP_012732812.1;Ontology_term=GO:0019867;gbkey=CDS;gene=bamE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732812.1;locus_tag=NIV78_RS29035;product=outer membrane protein assembly factor BamE;protein_id=WP_012732812.1;transl_table=11 NZ_CP100138.1 RefSeq gene 15510 15929 . - . ID=gene-NIV78_RS29040;Name=NIV78_RS29040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29040 NZ_CP100138.1 Protein Homology CDS 15510 15929 . - 0 ID=cds-WP_039201912.1;Parent=gene-NIV78_RS29040;Dbxref=Genbank:WP_039201912.1;Name=WP_039201912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732813.1;locus_tag=NIV78_RS29040;product=hypothetical protein;protein_id=WP_039201912.1;transl_table=11 NZ_CP100138.1 RefSeq gene 15940 18036 . - . ID=gene-NIV78_RS29045;Name=NIV78_RS29045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29045 NZ_CP100138.1 Protein Homology CDS 15940 18036 . - 0 ID=cds-WP_257758101.1;Parent=gene-NIV78_RS29045;Dbxref=Genbank:WP_257758101.1;Name=WP_257758101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732814.1;locus_tag=NIV78_RS29045;product=zeta toxin family protein;protein_id=WP_257758101.1;transl_table=11 NZ_CP100138.1 RefSeq gene 18048 18296 . - . ID=gene-NIV78_RS29050;Name=NIV78_RS29050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29050 NZ_CP100138.1 Protein Homology CDS 18048 18296 . - 0 ID=cds-WP_039201920.1;Parent=gene-NIV78_RS29050;Dbxref=Genbank:WP_039201920.1;Name=WP_039201920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732815.1;locus_tag=NIV78_RS29050;product=hypothetical protein;protein_id=WP_039201920.1;transl_table=11 NZ_CP100138.1 RefSeq gene 18335 18964 . - . ID=gene-NIV78_RS29055;Name=NIV78_RS29055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29055 NZ_CP100138.1 Protein Homology CDS 18335 18964 . - 0 ID=cds-WP_039201915.1;Parent=gene-NIV78_RS29055;Dbxref=Genbank:WP_039201915.1;Name=WP_039201915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735275.1;locus_tag=NIV78_RS29055;product=phospholipase D family protein;protein_id=WP_039201915.1;transl_table=11 NZ_CP100138.1 RefSeq gene 19222 19608 . + . ID=gene-NIV78_RS29060;Name=NIV78_RS29060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29060 NZ_CP100138.1 Protein Homology CDS 19222 19608 . + 0 ID=cds-WP_039201916.1;Parent=gene-NIV78_RS29060;Dbxref=Genbank:WP_039201916.1;Name=WP_039201916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732817.1;locus_tag=NIV78_RS29060;product=hypothetical protein;protein_id=WP_039201916.1;transl_table=11 NZ_CP100138.1 RefSeq gene 19646 23080 . - . ID=gene-NIV78_RS29065;Name=NIV78_RS29065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29065 NZ_CP100138.1 Protein Homology CDS 19646 23080 . - 0 ID=cds-WP_257758102.1;Parent=gene-NIV78_RS29065;Dbxref=Genbank:WP_257758102.1;Name=WP_257758102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011695083.1;locus_tag=NIV78_RS29065;product=conjugal transfer protein TraG N-terminal domain-containing protein;protein_id=WP_257758102.1;transl_table=11 NZ_CP100138.1 RefSeq gene 23083 24528 . - . ID=gene-NIV78_RS29070;Name=NIV78_RS29070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29070 NZ_CP100138.1 Protein Homology CDS 23083 24528 . - 0 ID=cds-WP_012735278.1;Parent=gene-NIV78_RS29070;Dbxref=Genbank:WP_012735278.1;Name=WP_012735278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732819.1;locus_tag=NIV78_RS29070;product=conjugal transfer protein TraH;protein_id=WP_012735278.1;transl_table=11 NZ_CP100138.1 RefSeq gene 24525 25568 . - . ID=gene-NIV78_RS29075;Name=NIV78_RS29075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29075 NZ_CP100138.1 Protein Homology CDS 24525 25568 . - 0 ID=cds-WP_209954626.1;Parent=gene-NIV78_RS29075;Dbxref=Genbank:WP_209954626.1;Name=WP_209954626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735279.1;locus_tag=NIV78_RS29075;product=hypothetical protein;protein_id=WP_209954626.1;transl_table=11 NZ_CP100138.1 RefSeq gene 25568 26350 . - . ID=gene-NIV78_RS29080;Name=NIV78_RS29080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29080 NZ_CP100138.1 Protein Homology CDS 25568 26350 . - 0 ID=cds-WP_039202638.1;Parent=gene-NIV78_RS29080;Dbxref=Genbank:WP_039202638.1;Name=WP_039202638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735280.1;locus_tag=NIV78_RS29080;product=conjugal transfer protein TraF;protein_id=WP_039202638.1;transl_table=11 NZ_CP100138.1 RefSeq gene 26374 26769 . - . ID=gene-NIV78_RS29085;Name=NIV78_RS29085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29085 NZ_CP100138.1 GeneMarkS-2+ CDS 26374 26769 . - 0 ID=cds-WP_017432465.1;Parent=gene-NIV78_RS29085;Dbxref=Genbank:WP_017432465.1;Name=WP_017432465.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS29085;product=hypothetical protein;protein_id=WP_017432465.1;transl_table=11 NZ_CP100138.1 RefSeq gene 26793 27200 . - . ID=gene-NIV78_RS29090;Name=NIV78_RS29090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29090 NZ_CP100138.1 Protein Homology CDS 26793 27200 . - 0 ID=cds-WP_017432466.1;Parent=gene-NIV78_RS29090;Dbxref=Genbank:WP_017432466.1;Name=WP_017432466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732821.1;locus_tag=NIV78_RS29090;product=hypothetical protein;protein_id=WP_017432466.1;transl_table=11 NZ_CP100138.1 RefSeq gene 27197 28462 . - . ID=gene-NIV78_RS29095;Name=NIV78_RS29095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29095 NZ_CP100138.1 Protein Homology CDS 27197 28462 . - 0 ID=cds-WP_012735282.1;Parent=gene-NIV78_RS29095;Dbxref=Genbank:WP_012735282.1;Name=WP_012735282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732822.1;locus_tag=NIV78_RS29095;product=conjugal transfer protein TraN;protein_id=WP_012735282.1;transl_table=11 NZ_CP100138.1 RefSeq gene 28459 29757 . - . ID=gene-NIV78_RS29100;Name=NIV78_RS29100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29100 NZ_CP100138.1 Protein Homology CDS 28459 29757 . - 0 ID=cds-WP_012735283.1;Parent=gene-NIV78_RS29100;Dbxref=Genbank:WP_012735283.1;Name=WP_012735283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735283.1;locus_tag=NIV78_RS29100;product=hypothetical protein;protein_id=WP_012735283.1;transl_table=11 NZ_CP100138.1 RefSeq gene 29757 30548 . - . ID=gene-NIV78_RS29105;Name=trbC;gbkey=Gene;gene=trbC;gene_biotype=protein_coding;locus_tag=NIV78_RS29105 NZ_CP100138.1 Protein Homology CDS 29757 30548 . - 0 ID=cds-WP_012735284.1;Parent=gene-NIV78_RS29105;Dbxref=Genbank:WP_012735284.1;Name=WP_012735284.1;gbkey=CDS;gene=trbC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732824.1;locus_tag=NIV78_RS29105;product=type-F conjugative transfer system pilin assembly protein TrbC;protein_id=WP_012735284.1;transl_table=11 NZ_CP100138.1 RefSeq gene 30545 31522 . - . ID=gene-NIV78_RS29110;Name=NIV78_RS29110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29110 NZ_CP100138.1 Protein Homology CDS 30545 31522 . - 0 ID=cds-WP_176359146.1;Parent=gene-NIV78_RS29110;Dbxref=Genbank:WP_176359146.1;Name=WP_176359146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011695074.1;locus_tag=NIV78_RS29110;product=TraU family protein;protein_id=WP_176359146.1;transl_table=11 NZ_CP100138.1 RefSeq gene 31573 32520 . - . ID=gene-NIV78_RS29115;Name=NIV78_RS29115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29115 NZ_CP100138.1 Protein Homology CDS 31573 32520 . - 0 ID=cds-WP_245163860.1;Parent=gene-NIV78_RS29115;Dbxref=Genbank:WP_245163860.1;Name=WP_245163860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735286.1;locus_tag=NIV78_RS29115;product=hypothetical protein;protein_id=WP_245163860.1;transl_table=11 NZ_CP100138.1 RefSeq gene 32587 33225 . - . ID=gene-NIV78_RS29120;Name=traW;gbkey=Gene;gene=traW;gene_biotype=protein_coding;locus_tag=NIV78_RS29120 NZ_CP100138.1 Protein Homology CDS 32587 33225 . - 0 ID=cds-WP_039202645.1;Parent=gene-NIV78_RS29120;Dbxref=Genbank:WP_039202645.1;Name=WP_039202645.1;gbkey=CDS;gene=traW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732826.1;locus_tag=NIV78_RS29120;product=type-F conjugative transfer system protein TraW;protein_id=WP_039202645.1;transl_table=11 NZ_CP100138.1 RefSeq gene 33239 33739 . - . ID=gene-NIV78_RS29125;Name=NIV78_RS29125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29125 NZ_CP100138.1 Protein Homology CDS 33239 33739 . - 0 ID=cds-WP_012735288.1;Parent=gene-NIV78_RS29125;Dbxref=Genbank:WP_012735288.1;Name=WP_012735288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732827.1;locus_tag=NIV78_RS29125;product=S26 family signal peptidase;protein_id=WP_012735288.1;transl_table=11 NZ_CP100138.1 RefSeq gene 33736 34107 . - . ID=gene-NIV78_RS29130;Name=NIV78_RS29130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29130 NZ_CP100138.1 Protein Homology CDS 33736 34107 . - 0 ID=cds-WP_039202647.1;Parent=gene-NIV78_RS29130;Dbxref=Genbank:WP_039202647.1;Name=WP_039202647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732828.1;locus_tag=NIV78_RS29130;product=TrbI F-type domain-containing protein;protein_id=WP_039202647.1;transl_table=11 NZ_CP100138.1 RefSeq gene 34104 36704 . - . ID=gene-NIV78_RS29135;Name=traC;gbkey=Gene;gene=traC;gene_biotype=protein_coding;locus_tag=NIV78_RS29135 NZ_CP100138.1 Protein Homology CDS 34104 36704 . - 0 ID=cds-WP_257758104.1;Parent=gene-NIV78_RS29135;Dbxref=Genbank:WP_257758104.1;Name=WP_257758104.1;gbkey=CDS;gene=traC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735290.1;locus_tag=NIV78_RS29135;product=type IV secretion system protein TraC;protein_id=WP_257758104.1;transl_table=11 NZ_CP100138.1 RefSeq gene 36718 37416 . - . ID=gene-NIV78_RS29140;Name=traV;gbkey=Gene;gene=traV;gene_biotype=protein_coding;locus_tag=NIV78_RS29140 NZ_CP100138.1 Protein Homology CDS 36718 37416 . - 0 ID=cds-WP_017924038.1;Parent=gene-NIV78_RS29140;Dbxref=Genbank:WP_017924038.1;Name=WP_017924038.1;gbkey=CDS;gene=traV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732830.1;locus_tag=NIV78_RS29140;product=type IV conjugative transfer system lipoprotein TraV;protein_id=WP_017924038.1;transl_table=11 NZ_CP100138.1 RefSeq gene 37419 38327 . - . ID=gene-NIV78_RS29145;Name=NIV78_RS29145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29145 NZ_CP100138.1 Protein Homology CDS 37419 38327 . - 0 ID=cds-WP_230674452.1;Parent=gene-NIV78_RS29145;Dbxref=Genbank:WP_230674452.1;Name=WP_230674452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732831.1;locus_tag=NIV78_RS29145;product=DsbC family protein;protein_id=WP_230674452.1;transl_table=11 NZ_CP100138.1 RefSeq gene 38324 39292 . - . ID=gene-NIV78_RS29150;Name=NIV78_RS29150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29150 NZ_CP100138.1 Protein Homology CDS 38324 39292 . - 0 ID=cds-WP_230674453.1;Parent=gene-NIV78_RS29150;Dbxref=Genbank:WP_230674453.1;Name=WP_230674453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009901192.1;locus_tag=NIV78_RS29150;product=DUF5131 family protein;protein_id=WP_230674453.1;transl_table=11 NZ_CP100138.1 RefSeq gene 39420 39866 . - . ID=gene-NIV78_RS29155;Name=NIV78_RS29155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29155 NZ_CP100138.1 Protein Homology CDS 39420 39866 . - 0 ID=cds-WP_017924571.1;Parent=gene-NIV78_RS29155;Dbxref=Genbank:WP_017924571.1;Name=WP_017924571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020190115.1;locus_tag=NIV78_RS29155;product=HNH endonuclease;protein_id=WP_017924571.1;transl_table=11 NZ_CP100138.1 RefSeq gene 39863 40951 . - . ID=gene-NIV78_RS29160;Name=NIV78_RS29160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29160 NZ_CP100138.1 Protein Homology CDS 39863 40951 . - 0 ID=cds-WP_080763626.1;Parent=gene-NIV78_RS29160;Dbxref=Genbank:WP_080763626.1;Name=WP_080763626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732833.1;locus_tag=NIV78_RS29160;product=hypothetical protein;protein_id=WP_080763626.1;transl_table=11 NZ_CP100138.1 RefSeq gene 40944 42281 . - . ID=gene-NIV78_RS29165;Name=NIV78_RS29165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29165 NZ_CP100138.1 Protein Homology CDS 40944 42281 . - 0 ID=cds-WP_039202662.1;Parent=gene-NIV78_RS29165;Dbxref=Genbank:WP_039202662.1;Name=WP_039202662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732834.1;locus_tag=NIV78_RS29165;product=TraB/VirB10 family protein;protein_id=WP_039202662.1;transl_table=11 NZ_CP100138.1 RefSeq gene 42274 43014 . - . ID=gene-NIV78_RS29170;Name=NIV78_RS29170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29170 NZ_CP100138.1 Protein Homology CDS 42274 43014 . - 0 ID=cds-WP_012732835.1;Parent=gene-NIV78_RS29170;Dbxref=Genbank:WP_012732835.1;Name=WP_012732835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732835.1;locus_tag=NIV78_RS29170;product=type-F conjugative transfer system secretin TraK;protein_id=WP_012732835.1;transl_table=11 NZ_CP100138.1 RefSeq gene 43011 43622 . - . ID=gene-NIV78_RS29175;Name=NIV78_RS29175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29175 NZ_CP100138.1 Protein Homology CDS 43011 43622 . - 0 ID=cds-WP_039202649.1;Parent=gene-NIV78_RS29175;Dbxref=Genbank:WP_039202649.1;Name=WP_039202649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735294.1;locus_tag=NIV78_RS29175;product=type IV conjugative transfer system protein TraE;protein_id=WP_039202649.1;transl_table=11 NZ_CP100138.1 RefSeq gene 43627 43914 . - . ID=gene-NIV78_RS29180;Name=traL;gbkey=Gene;gene=traL;gene_biotype=protein_coding;locus_tag=NIV78_RS29180 NZ_CP100138.1 Protein Homology CDS 43627 43914 . - 0 ID=cds-WP_017923551.1;Parent=gene-NIV78_RS29180;Dbxref=Genbank:WP_017923551.1;Name=WP_017923551.1;gbkey=CDS;gene=traL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732837.1;locus_tag=NIV78_RS29180;product=type IV conjugative transfer system protein TraL;protein_id=WP_017923551.1;transl_table=11 NZ_CP100138.1 RefSeq gene 43924 44313 . - . ID=gene-NIV78_RS29185;Name=NIV78_RS29185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29185 NZ_CP100138.1 Protein Homology CDS 43924 44313 . - 0 ID=cds-WP_017923552.1;Parent=gene-NIV78_RS29185;Dbxref=Genbank:WP_017923552.1;Name=WP_017923552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735295.1;locus_tag=NIV78_RS29185;product=hypothetical protein;protein_id=WP_017923552.1;transl_table=11 NZ_CP100138.1 RefSeq gene 44896 45387 . - . ID=gene-NIV78_RS29190;Name=NIV78_RS29190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29190 NZ_CP100138.1 Protein Homology CDS 44896 45387 . - 0 ID=cds-WP_012735297.1;Parent=gene-NIV78_RS29190;Dbxref=Genbank:WP_012735297.1;Name=WP_012735297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732840.1;locus_tag=NIV78_RS29190;product=lytic transglycosylase domain-containing protein;protein_id=WP_012735297.1;transl_table=11 NZ_CP100138.1 RefSeq gene 45891 46238 . - . ID=gene-NIV78_RS29195;Name=NIV78_RS29195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29195 NZ_CP100138.1 GeneMarkS-2+ CDS 45891 46238 . - 0 ID=cds-WP_127913918.1;Parent=gene-NIV78_RS29195;Dbxref=Genbank:WP_127913918.1;Name=WP_127913918.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS29195;product=hypothetical protein;protein_id=WP_127913918.1;transl_table=11 NZ_CP100138.1 RefSeq gene 46410 46865 . - . ID=gene-NIV78_RS29200;Name=NIV78_RS29200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29200 NZ_CP100138.1 Protein Homology CDS 46410 46865 . - 0 ID=cds-WP_012735298.1;Parent=gene-NIV78_RS29200;Dbxref=Genbank:WP_012735298.1;Name=WP_012735298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735298.1;locus_tag=NIV78_RS29200;product=ester cyclase;protein_id=WP_012735298.1;transl_table=11 NZ_CP100138.1 RefSeq gene 46962 48260 . - . ID=gene-NIV78_RS29205;Name=NIV78_RS29205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29205 NZ_CP100138.1 Protein Homology CDS 46962 48260 . - 0 ID=cds-WP_017432435.1;Parent=gene-NIV78_RS29205;Dbxref=Genbank:WP_017432435.1;Name=WP_017432435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007177720.1;locus_tag=NIV78_RS29205;product=MFS transporter;protein_id=WP_017432435.1;transl_table=11 NZ_CP100138.1 RefSeq gene 48453 49340 . + . ID=gene-NIV78_RS29210;Name=NIV78_RS29210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29210 NZ_CP100138.1 Protein Homology CDS 48453 49340 . + 0 ID=cds-WP_230674573.1;Parent=gene-NIV78_RS29210;Dbxref=Genbank:WP_230674573.1;Name=WP_230674573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735299.1;locus_tag=NIV78_RS29210;product=LysR substrate-binding domain-containing protein;protein_id=WP_230674573.1;transl_table=11 NZ_CP100138.1 RefSeq gene 49458 54143 . + . ID=gene-NIV78_RS29215;Name=NIV78_RS29215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29215 NZ_CP100138.1 Protein Homology CDS 49458 54143 . + 0 ID=cds-WP_257758105.1;Parent=gene-NIV78_RS29215;Dbxref=Genbank:WP_257758105.1;Name=WP_257758105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212597.1;locus_tag=NIV78_RS29215;product=DUF6531 domain-containing protein;protein_id=WP_257758105.1;transl_table=11 NZ_CP100138.1 RefSeq gene 54140 54466 . + . ID=gene-NIV78_RS29220;Name=NIV78_RS29220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29220 NZ_CP100138.1 GeneMarkS-2+ CDS 54140 54466 . + 0 ID=cds-WP_155297030.1;Parent=gene-NIV78_RS29220;Dbxref=Genbank:WP_155297030.1;Name=WP_155297030.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS29220;product=hypothetical protein;protein_id=WP_155297030.1;transl_table=11 NZ_CP100138.1 RefSeq pseudogene 54485 54976 . + . ID=gene-NIV78_RS29225;Name=NIV78_RS29225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS29225;partial=true;pseudo=true;start_range=.,54485 NZ_CP100138.1 Protein Homology CDS 54485 54976 . + 0 ID=cds-NIV78_RS29225;Parent=gene-NIV78_RS29225;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03696.1;locus_tag=NIV78_RS29225;partial=true;product=sugar-binding protein;pseudo=true;start_range=.,54485;transl_table=11 NZ_CP100138.1 RefSeq gene 54979 55323 . + . ID=gene-NIV78_RS29230;Name=NIV78_RS29230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29230 NZ_CP100138.1 GeneMarkS-2+ CDS 54979 55323 . + 0 ID=cds-WP_155297029.1;Parent=gene-NIV78_RS29230;Dbxref=Genbank:WP_155297029.1;Name=WP_155297029.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS29230;product=hypothetical protein;protein_id=WP_155297029.1;transl_table=11 NZ_CP100138.1 RefSeq gene 55384 55665 . + . ID=gene-NIV78_RS29235;Name=NIV78_RS29235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29235 NZ_CP100138.1 Protein Homology CDS 55384 55665 . + 0 ID=cds-WP_155297028.1;Parent=gene-NIV78_RS29235;Dbxref=Genbank:WP_155297028.1;Name=WP_155297028.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022495.2;locus_tag=NIV78_RS29235;product=DUF2750 domain-containing protein;protein_id=WP_155297028.1;transl_table=11 NZ_CP100138.1 RefSeq gene 55699 56739 . + . ID=gene-NIV78_RS29240;Name=NIV78_RS29240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29240 NZ_CP100138.1 Protein Homology CDS 55699 56739 . + 0 ID=cds-WP_039203517.1;Parent=gene-NIV78_RS29240;Dbxref=Genbank:WP_039203517.1;Name=WP_039203517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000692716.1;locus_tag=NIV78_RS29240;product=DNA cytosine methyltransferase;protein_id=WP_039203517.1;transl_table=11 NZ_CP100138.1 RefSeq gene 56749 58755 . + . ID=gene-NIV78_RS29245;Name=NIV78_RS29245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29245 NZ_CP100138.1 Protein Homology CDS 56749 58755 . + 0 ID=cds-WP_080763651.1;Parent=gene-NIV78_RS29245;Dbxref=Genbank:WP_080763651.1;Name=WP_080763651.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024977.2;locus_tag=NIV78_RS29245;product=ATP-binding protein;protein_id=WP_080763651.1;transl_table=11 NZ_CP100138.1 RefSeq gene 58788 59605 . - . ID=gene-NIV78_RS29250;Name=NIV78_RS29250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29250 NZ_CP100138.1 Protein Homology CDS 59257 59605 . - 0 ID=cds-WP_257758106.1;Parent=gene-NIV78_RS29250;Dbxref=Genbank:WP_257758106.1;Name=WP_257758106.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS29250;product=IS5 family transposase;protein_id=WP_257758106.1;transl_table=11 NZ_CP100138.1 Protein Homology CDS 58788 59257 . - 2 ID=cds-WP_257758106.1;Parent=gene-NIV78_RS29250;Dbxref=Genbank:WP_257758106.1;Name=WP_257758106.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS29250;product=IS5 family transposase;protein_id=WP_257758106.1;transl_table=11 NZ_CP100138.1 RefSeq gene 60221 61174 . + . ID=gene-NIV78_RS29255;Name=NIV78_RS29255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29255 NZ_CP100138.1 GeneMarkS-2+ CDS 60221 61174 . + 0 ID=cds-WP_039205200.1;Parent=gene-NIV78_RS29255;Dbxref=Genbank:WP_039205200.1;Name=WP_039205200.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS29255;product=hypothetical protein;protein_id=WP_039205200.1;transl_table=11 NZ_CP100138.1 RefSeq gene 61227 62032 . + . ID=gene-NIV78_RS29260;Name=NIV78_RS29260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29260 NZ_CP100138.1 Protein Homology CDS 61227 61557 . + 0 ID=cds-WP_257758107.1;Parent=gene-NIV78_RS29260;Dbxref=Genbank:WP_257758107.1;Name=WP_257758107.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611183.1;locus_tag=NIV78_RS29260;product=IS5 family transposase;protein_id=WP_257758107.1;transl_table=11 NZ_CP100138.1 Protein Homology CDS 61557 62032 . + 2 ID=cds-WP_257758107.1;Parent=gene-NIV78_RS29260;Dbxref=Genbank:WP_257758107.1;Name=WP_257758107.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611183.1;locus_tag=NIV78_RS29260;product=IS5 family transposase;protein_id=WP_257758107.1;transl_table=11 NZ_CP100138.1 RefSeq gene 62249 62530 . + . ID=gene-NIV78_RS29265;Name=NIV78_RS29265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29265 NZ_CP100138.1 Protein Homology CDS 62249 62530 . + 0 ID=cds-WP_039204507.1;Parent=gene-NIV78_RS29265;Dbxref=Genbank:WP_039204507.1;Name=WP_039204507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877381.1;locus_tag=NIV78_RS29265;product=DUF1778 domain-containing protein;protein_id=WP_039204507.1;transl_table=11 NZ_CP100138.1 RefSeq gene 62527 63021 . + . ID=gene-NIV78_RS29270;Name=NIV78_RS29270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29270 NZ_CP100138.1 Protein Homology CDS 62527 63021 . + 0 ID=cds-WP_039204503.1;Parent=gene-NIV78_RS29270;Dbxref=Genbank:WP_039204503.1;Name=WP_039204503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038220.1;locus_tag=NIV78_RS29270;product=GNAT family N-acetyltransferase;protein_id=WP_039204503.1;transl_table=11 NZ_CP100138.1 RefSeq gene 63114 63584 . + . ID=gene-NIV78_RS29275;Name=NIV78_RS29275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29275 NZ_CP100138.1 Protein Homology CDS 63114 63584 . + 0 ID=cds-WP_080763678.1;Parent=gene-NIV78_RS29275;Dbxref=Genbank:WP_080763678.1;Name=WP_080763678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732850.1;locus_tag=NIV78_RS29275;product=ProQ/FINO family protein;protein_id=WP_080763678.1;transl_table=11 NZ_CP100138.1 RefSeq gene 63673 66594 . - . ID=gene-NIV78_RS29280;Name=NIV78_RS29280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29280 NZ_CP100138.1 Protein Homology CDS 63673 66594 . - 0 ID=cds-WP_257758109.1;Parent=gene-NIV78_RS29280;Dbxref=Genbank:WP_257758109.1;Name=WP_257758109.1;Ontology_term=GO:0006259,GO:0004386;gbkey=CDS;go_function=helicase activity|0004386||IEA;go_process=DNA metabolic process|0006259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732851.1;locus_tag=NIV78_RS29280;product=conjugative relaxase;protein_id=WP_257758109.1;transl_table=11 NZ_CP100138.1 RefSeq gene 66604 68670 . - . ID=gene-NIV78_RS29285;Name=NIV78_RS29285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29285 NZ_CP100138.1 Protein Homology CDS 66604 68670 . - 0 ID=cds-WP_039204005.1;Parent=gene-NIV78_RS29285;Dbxref=Genbank:WP_039204005.1;Name=WP_039204005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732852.1;locus_tag=NIV78_RS29285;product=type IV secretion system DNA-binding domain-containing protein;protein_id=WP_039204005.1;transl_table=11 NZ_CP100138.1 RefSeq gene 68663 69109 . - . ID=gene-NIV78_RS29290;Name=NIV78_RS29290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29290 NZ_CP100138.1 Protein Homology CDS 68663 69109 . - 0 ID=cds-WP_080763665.1;Parent=gene-NIV78_RS29290;Dbxref=Genbank:WP_080763665.1;Name=WP_080763665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732853.1;locus_tag=NIV78_RS29290;product=hypothetical protein;protein_id=WP_080763665.1;transl_table=11 NZ_CP100138.1 RefSeq gene 70256 71032 . - . ID=gene-NIV78_RS29295;Name=NIV78_RS29295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29295 NZ_CP100138.1 GeneMarkS-2+ CDS 70256 71032 . - 0 ID=cds-WP_257758111.1;Parent=gene-NIV78_RS29295;Dbxref=Genbank:WP_257758111.1;Name=WP_257758111.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS29295;product=hypothetical protein;protein_id=WP_257758111.1;transl_table=11 NZ_CP100138.1 RefSeq gene 71282 71563 . + . ID=gene-NIV78_RS29300;Name=NIV78_RS29300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29300 NZ_CP100138.1 Protein Homology CDS 71282 71563 . + 0 ID=cds-WP_176359118.1;Parent=gene-NIV78_RS29300;Dbxref=Genbank:WP_176359118.1;Name=WP_176359118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732854.1;locus_tag=NIV78_RS29300;product=hypothetical protein;protein_id=WP_176359118.1;transl_table=11 NZ_CP100138.1 RefSeq gene 71670 71746 . - . ID=gene-NIV78_RS29305;Name=NIV78_RS29305;gbkey=Gene;gene_biotype=tRNA;locus_tag=NIV78_RS29305 NZ_CP100138.1 tRNAscan-SE tRNA 71670 71746 . - . ID=rna-NIV78_RS29305;Parent=gene-NIV78_RS29305;anticodon=(pos:complement(71710..71712));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS29305;product=tRNA-Arg NZ_CP100138.1 tRNAscan-SE exon 71670 71746 . - . ID=exon-NIV78_RS29305-1;Parent=rna-NIV78_RS29305;anticodon=(pos:complement(71710..71712));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NIV78_RS29305;product=tRNA-Arg NZ_CP100138.1 RefSeq gene 71752 71925 . - . ID=gene-NIV78_RS29310;Name=NIV78_RS29310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29310 NZ_CP100138.1 GeneMarkS-2+ CDS 71752 71925 . - 0 ID=cds-WP_176359117.1;Parent=gene-NIV78_RS29310;Dbxref=Genbank:WP_176359117.1;Name=WP_176359117.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS29310;product=hypothetical protein;protein_id=WP_176359117.1;transl_table=11 NZ_CP100138.1 RefSeq gene 71980 72357 . - . ID=gene-NIV78_RS29315;Name=NIV78_RS29315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29315 NZ_CP100138.1 GeneMarkS-2+ CDS 71980 72357 . - 0 ID=cds-WP_257758112.1;Parent=gene-NIV78_RS29315;Dbxref=Genbank:WP_257758112.1;Name=WP_257758112.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS29315;product=hypothetical protein;protein_id=WP_257758112.1;transl_table=11 NZ_CP100138.1 RefSeq gene 72415 72687 . - . ID=gene-NIV78_RS29320;Name=NIV78_RS29320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29320 NZ_CP100138.1 Protein Homology CDS 72415 72687 . - 0 ID=cds-WP_012732855.1;Parent=gene-NIV78_RS29320;Dbxref=Genbank:WP_012732855.1;Name=WP_012732855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691790.1;locus_tag=NIV78_RS29320;product=hypothetical protein;protein_id=WP_012732855.1;transl_table=11 NZ_CP100138.1 RefSeq gene 72702 72992 . - . ID=gene-NIV78_RS29325;Name=NIV78_RS29325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29325 NZ_CP100138.1 GeneMarkS-2+ CDS 72702 72992 . - 0 ID=cds-WP_237711056.1;Parent=gene-NIV78_RS29325;Dbxref=Genbank:WP_237711056.1;Name=WP_237711056.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS29325;product=hypothetical protein;protein_id=WP_237711056.1;transl_table=11 NZ_CP100138.1 RefSeq gene 73787 76015 . - . ID=gene-NIV78_RS29330;Name=NIV78_RS29330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29330 NZ_CP100138.1 Protein Homology CDS 73787 76015 . - 0 ID=cds-WP_171467043.1;Parent=gene-NIV78_RS29330;Dbxref=Genbank:WP_171467043.1;Name=WP_171467043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732857.1;locus_tag=NIV78_RS29330;product=ParB N-terminal domain-containing protein;protein_id=WP_171467043.1;transl_table=11 NZ_CP100138.1 RefSeq gene 76657 76824 . - . ID=gene-NIV78_RS29335;Name=NIV78_RS29335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29335 NZ_CP100138.1 GeneMarkS-2+ CDS 76657 76824 . - 0 ID=cds-WP_017433877.1;Parent=gene-NIV78_RS29335;Dbxref=Genbank:WP_017433877.1;Name=WP_017433877.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS29335;product=hypothetical protein;protein_id=WP_017433877.1;transl_table=11 NZ_CP100138.1 RefSeq gene 77155 77661 . - . ID=gene-NIV78_RS29340;Name=NIV78_RS29340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29340 NZ_CP100138.1 Protein Homology CDS 77155 77661 . - 0 ID=cds-WP_012732858.1;Parent=gene-NIV78_RS29340;Dbxref=Genbank:WP_012732858.1;Name=WP_012732858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735308.1;locus_tag=NIV78_RS29340;product=hypothetical protein;protein_id=WP_012732858.1;transl_table=11 NZ_CP100138.1 RefSeq gene 77686 78339 . - . ID=gene-NIV78_RS29345;Name=NIV78_RS29345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29345 NZ_CP100138.1 Protein Homology CDS 77686 78339 . - 0 ID=cds-WP_012732859.1;Parent=gene-NIV78_RS29345;Dbxref=Genbank:WP_012732859.1;Name=WP_012732859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732859.1;locus_tag=NIV78_RS29345;product=DNA methyltransferase;protein_id=WP_012732859.1;transl_table=11 NZ_CP100138.1 RefSeq gene 79073 79900 . - . ID=gene-NIV78_RS29350;Name=NIV78_RS29350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29350 NZ_CP100138.1 Protein Homology CDS 79073 79900 . - 0 ID=cds-WP_012732860.1;Parent=gene-NIV78_RS29350;Dbxref=Genbank:WP_012732860.1;Name=WP_012732860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424812.1;locus_tag=NIV78_RS29350;product=DUF945 domain-containing protein;protein_id=WP_012732860.1;transl_table=11 NZ_CP100138.1 RefSeq gene 80457 80918 . - . ID=gene-NIV78_RS29355;Name=NIV78_RS29355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29355 NZ_CP100138.1 Protein Homology CDS 80457 80918 . - 0 ID=cds-WP_017922598.1;Parent=gene-NIV78_RS29355;Dbxref=Genbank:WP_017922598.1;Name=WP_017922598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732861.1;locus_tag=NIV78_RS29355;product=hypothetical protein;protein_id=WP_017922598.1;transl_table=11 NZ_CP100138.1 RefSeq gene 80979 81635 . - . ID=gene-NIV78_RS29360;Name=NIV78_RS29360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29360 NZ_CP100138.1 Protein Homology CDS 80979 81635 . - 0 ID=cds-WP_257758114.1;Parent=gene-NIV78_RS29360;Dbxref=Genbank:WP_257758114.1;Name=WP_257758114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735310.1;locus_tag=NIV78_RS29360;product=hypothetical protein;protein_id=WP_257758114.1;transl_table=11 NZ_CP100138.1 RefSeq gene 81701 82180 . - . ID=gene-NIV78_RS29365;Name=NIV78_RS29365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29365 NZ_CP100138.1 Protein Homology CDS 81701 82180 . - 0 ID=cds-WP_042967548.1;Parent=gene-NIV78_RS29365;Dbxref=Genbank:WP_042967548.1;Name=WP_042967548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735311.1;locus_tag=NIV78_RS29365;product=hypothetical protein;protein_id=WP_042967548.1;transl_table=11 NZ_CP100138.1 RefSeq gene 83065 83541 . + . ID=gene-NIV78_RS29370;Name=NIV78_RS29370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29370 NZ_CP100138.1 Protein Homology CDS 83065 83541 . + 0 ID=cds-WP_042967545.1;Parent=gene-NIV78_RS29370;Dbxref=Genbank:WP_042967545.1;Name=WP_042967545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735312.1;locus_tag=NIV78_RS29370;product=hypothetical protein;protein_id=WP_042967545.1;transl_table=11 NZ_CP100138.1 RefSeq gene 83593 84039 . + . ID=gene-NIV78_RS29375;Name=NIV78_RS29375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29375 NZ_CP100138.1 Protein Homology CDS 83593 84039 . + 0 ID=cds-WP_017432684.1;Parent=gene-NIV78_RS29375;Dbxref=Genbank:WP_017432684.1;Name=WP_017432684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735313.1;locus_tag=NIV78_RS29375;product=hypothetical protein;protein_id=WP_017432684.1;transl_table=11 NZ_CP100138.1 RefSeq gene 84173 85321 . - . ID=gene-NIV78_RS29380;Name=NIV78_RS29380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29380 NZ_CP100138.1 Protein Homology CDS 84173 85321 . - 0 ID=cds-WP_257758115.1;Parent=gene-NIV78_RS29380;Dbxref=Genbank:WP_257758115.1;Name=WP_257758115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735314.1;locus_tag=NIV78_RS29380;product=DUF3560 domain-containing protein;protein_id=WP_257758115.1;transl_table=11 NZ_CP100138.1 RefSeq gene 85783 86481 . + . ID=gene-NIV78_RS29385;Name=NIV78_RS29385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29385 NZ_CP100138.1 GeneMarkS-2+ CDS 85783 86481 . + 0 ID=cds-WP_045678704.1;Parent=gene-NIV78_RS29385;Dbxref=Genbank:WP_045678704.1;Name=WP_045678704.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS29385;product=hypothetical protein;protein_id=WP_045678704.1;transl_table=11 NZ_CP100138.1 RefSeq gene 86481 86867 . + . ID=gene-NIV78_RS29390;Name=NIV78_RS29390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29390 NZ_CP100138.1 GeneMarkS-2+ CDS 86481 86867 . + 0 ID=cds-WP_017922593.1;Parent=gene-NIV78_RS29390;Dbxref=Genbank:WP_017922593.1;Name=WP_017922593.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS29390;product=hypothetical protein;protein_id=WP_017922593.1;transl_table=11 NZ_CP100138.1 RefSeq gene 87291 87902 . + . ID=gene-NIV78_RS29395;Name=NIV78_RS29395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29395 NZ_CP100138.1 Protein Homology CDS 87291 87902 . + 0 ID=cds-WP_026051557.1;Parent=gene-NIV78_RS29395;Dbxref=Genbank:WP_026051557.1;Name=WP_026051557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697438.1;locus_tag=NIV78_RS29395;product=methyltransferase domain-containing protein;protein_id=WP_026051557.1;transl_table=11 NZ_CP100138.1 RefSeq gene 88024 88566 . + . ID=gene-NIV78_RS29400;Name=NIV78_RS29400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29400 NZ_CP100138.1 Protein Homology CDS 88024 88566 . + 0 ID=cds-WP_080742217.1;Parent=gene-NIV78_RS29400;Dbxref=Genbank:WP_080742217.1;Name=WP_080742217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697439.1;locus_tag=NIV78_RS29400;product=GNAT family N-acetyltransferase;protein_id=WP_080742217.1;transl_table=11 NZ_CP100138.1 RefSeq gene 88926 90392 . + . ID=gene-NIV78_RS29405;Name=NIV78_RS29405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29405 NZ_CP100138.1 Protein Homology CDS 88926 90392 . + 0 ID=cds-WP_198292469.1-4;Parent=gene-NIV78_RS29405;Dbxref=Genbank:WP_198292469.1;Name=WP_198292469.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763800.1;locus_tag=NIV78_RS29405;product=ISNCY family transposase;protein_id=WP_198292469.1;transl_table=11 NZ_CP100138.1 RefSeq gene 90808 91854 . + . ID=gene-NIV78_RS29410;Name=NIV78_RS29410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29410 NZ_CP100138.1 Protein Homology CDS 90808 91854 . + 0 ID=cds-WP_257758116.1;Parent=gene-NIV78_RS29410;Dbxref=Genbank:WP_257758116.1;Name=WP_257758116.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734099.1;locus_tag=NIV78_RS29410;product=IS481 family transposase;protein_id=WP_257758116.1;transl_table=11 NZ_CP100138.1 RefSeq pseudogene 91903 92004 . - . ID=gene-NIV78_RS29415;Name=NIV78_RS29415;end_range=92004,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS29415;partial=true;pseudo=true NZ_CP100138.1 Protein Homology CDS 91903 92004 . - 0 ID=cds-NIV78_RS29415;Parent=gene-NIV78_RS29415;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=92004,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218041.1;locus_tag=NIV78_RS29415;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP100138.1 RefSeq gene 92140 92364 . + . ID=gene-NIV78_RS29420;Name=NIV78_RS29420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29420 NZ_CP100138.1 GeneMarkS-2+ CDS 92140 92364 . + 0 ID=cds-WP_153479292.1;Parent=gene-NIV78_RS29420;Dbxref=Genbank:WP_153479292.1;Name=WP_153479292.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS29420;product=hypothetical protein;protein_id=WP_153479292.1;transl_table=11 NZ_CP100138.1 RefSeq gene 92354 94861 . + . ID=gene-NIV78_RS29425;Name=NIV78_RS29425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29425 NZ_CP100138.1 Protein Homology CDS 92354 94861 . + 0 ID=cds-WP_257758117.1;Parent=gene-NIV78_RS29425;Dbxref=Genbank:WP_257758117.1;Name=WP_257758117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401578.1;locus_tag=NIV78_RS29425;product=type VI secretion system tip protein VgrG;protein_id=WP_257758117.1;transl_table=11 NZ_CP100138.1 RefSeq gene 94914 97667 . + . ID=gene-NIV78_RS29430;Name=NIV78_RS29430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29430 NZ_CP100138.1 Protein Homology CDS 94914 97667 . + 0 ID=cds-WP_257758118.1;Parent=gene-NIV78_RS29430;Dbxref=Genbank:WP_257758118.1;Name=WP_257758118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691778.1;locus_tag=NIV78_RS29430;product=hypothetical protein;protein_id=WP_257758118.1;transl_table=11 NZ_CP100138.1 RefSeq gene 97674 98378 . + . ID=gene-NIV78_RS29435;Name=NIV78_RS29435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29435 NZ_CP100138.1 Protein Homology CDS 97674 98378 . + 0 ID=cds-WP_080630297.1;Parent=gene-NIV78_RS29435;Dbxref=Genbank:WP_080630297.1;Name=WP_080630297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467498.1;locus_tag=NIV78_RS29435;product=hypothetical protein;protein_id=WP_080630297.1;transl_table=11 NZ_CP100138.1 RefSeq gene 98375 98497 . + . ID=gene-NIV78_RS29440;Name=NIV78_RS29440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29440 NZ_CP100138.1 GeneMarkS-2+ CDS 98375 98497 . + 0 ID=cds-WP_257758121.1;Parent=gene-NIV78_RS29440;Dbxref=Genbank:WP_257758121.1;Name=WP_257758121.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS29440;product=hypothetical protein;protein_id=WP_257758121.1;transl_table=11 NZ_CP100138.1 RefSeq gene 98836 100392 . - . ID=gene-NIV78_RS29445;Name=NIV78_RS29445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29445 NZ_CP100138.1 Protein Homology CDS 98836 100392 . - 0 ID=cds-WP_012732752.1-6;Parent=gene-NIV78_RS29445;Dbxref=Genbank:WP_012732752.1;Name=WP_012732752.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875269.1;locus_tag=NIV78_RS29445;product=IS66 family transposase;protein_id=WP_012732752.1;transl_table=11 NZ_CP100138.1 RefSeq gene 100424 100774 . - . ID=gene-NIV78_RS29450;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=NIV78_RS29450 NZ_CP100138.1 Protein Homology CDS 100424 100774 . - 0 ID=cds-WP_012732753.1-6;Parent=gene-NIV78_RS29450;Dbxref=Genbank:WP_012732753.1;Name=WP_012732753.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: protein motif:HMM:NF017528.2;locus_tag=NIV78_RS29450;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_012732753.1;transl_table=11 NZ_CP100138.1 RefSeq gene 100750 101226 . - . ID=gene-NIV78_RS29455;Name=NIV78_RS29455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29455 NZ_CP100138.1 Protein Homology CDS 100750 101226 . - 0 ID=cds-WP_012734051.1-6;Parent=gene-NIV78_RS29455;Dbxref=Genbank:WP_012734051.1;Name=WP_012734051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699891.1;locus_tag=NIV78_RS29455;product=transposase;protein_id=WP_012734051.1;transl_table=11 NZ_CP100138.1 RefSeq gene 102231 102641 . - . ID=gene-NIV78_RS29460;Name=NIV78_RS29460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29460 NZ_CP100138.1 Protein Homology CDS 102231 102641 . - 0 ID=cds-WP_257758123.1;Parent=gene-NIV78_RS29460;Dbxref=Genbank:WP_257758123.1;Name=WP_257758123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735318.1;locus_tag=NIV78_RS29460;product=hypothetical protein;protein_id=WP_257758123.1;transl_table=11 NZ_CP100138.1 RefSeq gene 103193 103858 . - . ID=gene-NIV78_RS29465;Name=gmtX;gbkey=Gene;gene=gmtX;gene_biotype=protein_coding;locus_tag=NIV78_RS29465 NZ_CP100138.1 Protein Homology CDS 103193 103858 . - 0 ID=cds-WP_012735319.1;Parent=gene-NIV78_RS29465;Dbxref=Genbank:WP_012735319.1;Name=WP_012735319.1;gbkey=CDS;gene=gmtX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003380136.1;locus_tag=NIV78_RS29465;product=gamma-mobile-trio protein GmtX;protein_id=WP_012735319.1;transl_table=11 NZ_CP100138.1 RefSeq gene 103855 106461 . - . ID=gene-NIV78_RS29470;Name=NIV78_RS29470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29470 NZ_CP100138.1 Protein Homology CDS 103855 106461 . - 0 ID=cds-WP_012735320.1;Parent=gene-NIV78_RS29470;Dbxref=Genbank:WP_012735320.1;Name=WP_012735320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012431292.1;locus_tag=NIV78_RS29470;product=VPA1269 family protein;protein_id=WP_012735320.1;transl_table=11 NZ_CP100138.1 RefSeq gene 106454 107869 . - . ID=gene-NIV78_RS29475;Name=gmtY;gbkey=Gene;gene=gmtY;gene_biotype=protein_coding;locus_tag=NIV78_RS29475 NZ_CP100138.1 Protein Homology CDS 106454 107869 . - 0 ID=cds-WP_012735321.1;Parent=gene-NIV78_RS29475;Dbxref=Genbank:WP_012735321.1;Name=WP_012735321.1;gbkey=CDS;gene=gmtY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007182815.1;locus_tag=NIV78_RS29475;product=gamma-mobile-trio recombinase GmtY;protein_id=WP_012735321.1;transl_table=11 NZ_CP100138.1 RefSeq gene 107954 109216 . - . ID=gene-NIV78_RS29480;Name=NIV78_RS29480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29480 NZ_CP100138.1 Protein Homology CDS 107954 109216 . - 0 ID=cds-WP_193373184.1;Parent=gene-NIV78_RS29480;Dbxref=Genbank:WP_193373184.1;Name=WP_193373184.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007182816.1;locus_tag=NIV78_RS29480;product=MFS transporter;protein_id=WP_193373184.1;transl_table=11 NZ_CP100138.1 RefSeq gene 109167 109931 . - . ID=gene-NIV78_RS29485;Name=arsH;gbkey=Gene;gene=arsH;gene_biotype=protein_coding;locus_tag=NIV78_RS29485 NZ_CP100138.1 Protein Homology CDS 109167 109931 . - 0 ID=cds-WP_012735323.1;Parent=gene-NIV78_RS29485;Dbxref=Genbank:WP_012735323.1;Name=WP_012735323.1;Ontology_term=GO:0003674;gbkey=CDS;gene=arsH;go_function=molecular_function|0003674||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735323.1;locus_tag=NIV78_RS29485;product=arsenical resistance protein ArsH;protein_id=WP_012735323.1;transl_table=11 NZ_CP100138.1 RefSeq gene 109945 110772 . - . ID=gene-NIV78_RS29490;Name=arsN2;gbkey=Gene;gene=arsN2;gene_biotype=protein_coding;locus_tag=NIV78_RS29490 NZ_CP100138.1 Protein Homology CDS 109945 110772 . - 0 ID=cds-WP_012735324.1;Parent=gene-NIV78_RS29490;Dbxref=Genbank:WP_012735324.1;Name=WP_012735324.1;gbkey=CDS;gene=arsN2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020066557.1;locus_tag=NIV78_RS29490;product=arsenic resistance N-acetyltransferase ArsN2;protein_id=WP_012735324.1;transl_table=11 NZ_CP100138.1 RefSeq gene 110782 111843 . - . ID=gene-NIV78_RS29495;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=NIV78_RS29495 NZ_CP100138.1 Protein Homology CDS 110782 111843 . - 0 ID=cds-WP_012735325.1;Parent=gene-NIV78_RS29495;Dbxref=Genbank:WP_012735325.1;Name=WP_012735325.1;Ontology_term=GO:0008490;gbkey=CDS;gene=arsB;go_function=arsenite secondary active transmembrane transporter activity|0008490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007182819.1;locus_tag=NIV78_RS29495;product=ACR3 family arsenite efflux transporter;protein_id=WP_012735325.1;transl_table=11 NZ_CP100138.1 RefSeq gene 111830 112351 . - . ID=gene-NIV78_RS29500;Name=NIV78_RS29500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29500 NZ_CP100138.1 Protein Homology CDS 111830 112351 . - 0 ID=cds-WP_012735326.1;Parent=gene-NIV78_RS29500;Dbxref=Genbank:WP_012735326.1;Name=WP_012735326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413252.1;locus_tag=NIV78_RS29500;product=arsenate reductase ArsC;protein_id=WP_012735326.1;transl_table=11 NZ_CP100138.1 RefSeq gene 112509 112841 . - . ID=gene-NIV78_RS29505;Name=NIV78_RS29505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29505 NZ_CP100138.1 Protein Homology CDS 112509 112841 . - 0 ID=cds-WP_012735327.1;Parent=gene-NIV78_RS29505;Dbxref=Genbank:WP_012735327.1;Name=WP_012735327.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007182822.1;locus_tag=NIV78_RS29505;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WP_012735327.1;transl_table=11 NZ_CP100138.1 RefSeq gene 113117 113821 . + . ID=gene-NIV78_RS29510;Name=imuA;gbkey=Gene;gene=imuA;gene_biotype=protein_coding;locus_tag=NIV78_RS29510 NZ_CP100138.1 Protein Homology CDS 113117 113821 . + 0 ID=cds-WP_043308749.1;Parent=gene-NIV78_RS29510;Dbxref=Genbank:WP_043308749.1;Name=WP_043308749.1;Ontology_term=GO:0009432,GO:0051782;gbkey=CDS;gene=imuA;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600146.1;locus_tag=NIV78_RS29510;product=translesion DNA synthesis-associated protein ImuA;protein_id=WP_043308749.1;transl_table=11 NZ_CP100138.1 RefSeq gene 113739 115217 . + . ID=gene-NIV78_RS29515;Name=NIV78_RS29515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29515 NZ_CP100138.1 Protein Homology CDS 113739 115217 . + 0 ID=cds-WP_257758086.1;Parent=gene-NIV78_RS29515;Dbxref=Genbank:WP_257758086.1;Name=WP_257758086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012211068.1;locus_tag=NIV78_RS29515;product=DNA polymerase Y family protein;protein_id=WP_257758086.1;transl_table=11 NZ_CP100138.1 RefSeq gene 115224 118373 . + . ID=gene-NIV78_RS29520;Name=NIV78_RS29520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29520 NZ_CP100138.1 Protein Homology CDS 115224 118373 . + 0 ID=cds-WP_257758087.1;Parent=gene-NIV78_RS29520;Dbxref=Genbank:WP_257758087.1;Name=WP_257758087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735330.1;locus_tag=NIV78_RS29520;product=error-prone DNA polymerase;protein_id=WP_257758087.1;transl_table=11 NZ_CP100138.1 RefSeq gene 118386 118673 . + . ID=gene-NIV78_RS29525;Name=NIV78_RS29525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29525 NZ_CP100138.1 Protein Homology CDS 118386 118673 . + 0 ID=cds-WP_257758088.1;Parent=gene-NIV78_RS29525;Dbxref=Genbank:WP_257758088.1;Name=WP_257758088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735344.1;locus_tag=NIV78_RS29525;product=hypothetical protein;protein_id=WP_257758088.1;transl_table=11 NZ_CP100138.1 RefSeq gene 118695 118850 . - . ID=gene-NIV78_RS29530;Name=NIV78_RS29530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29530 NZ_CP100138.1 GeneMarkS-2+ CDS 118695 118850 . - 0 ID=cds-WP_257758089.1;Parent=gene-NIV78_RS29530;Dbxref=Genbank:WP_257758089.1;Name=WP_257758089.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS29530;product=hypothetical protein;protein_id=WP_257758089.1;transl_table=11 NZ_CP100138.1 RefSeq pseudogene 119010 120056 . - . ID=gene-NIV78_RS29535;Name=NIV78_RS29535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS29535;pseudo=true NZ_CP100138.1 Protein Homology CDS 119010 120056 . - 0 ID=cds-NIV78_RS29535;Parent=gene-NIV78_RS29535;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734099.1;locus_tag=NIV78_RS29535;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP100138.1 RefSeq pseudogene 120188 120564 . - . ID=gene-NIV78_RS29540;Name=NIV78_RS29540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS29540;partial=true;pseudo=true;start_range=.,120188 NZ_CP100138.1 Protein Homology CDS 120188 120564 . - 0 ID=cds-NIV78_RS29540;Parent=gene-NIV78_RS29540;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611847.1;locus_tag=NIV78_RS29540;partial=true;product=transposase;pseudo=true;start_range=.,120188;transl_table=11 NZ_CP100138.1 RefSeq pseudogene 120929 121180 . - . ID=gene-NIV78_RS29545;Name=NIV78_RS29545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS29545;partial=true;pseudo=true;start_range=.,120929 NZ_CP100138.1 Protein Homology CDS 120929 121180 . - 0 ID=cds-NIV78_RS29545;Parent=gene-NIV78_RS29545;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611505.1;locus_tag=NIV78_RS29545;partial=true;product=transposase;pseudo=true;start_range=.,120929;transl_table=11 NZ_CP100138.1 RefSeq gene 121453 122319 . + . ID=gene-NIV78_RS29550;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=NIV78_RS29550 NZ_CP100138.1 Protein Homology CDS 121453 122319 . + 0 ID=cds-WP_251107348.1;Parent=gene-NIV78_RS29550;Dbxref=Genbank:WP_251107348.1;Name=WP_251107348.1;gbkey=CDS;gene=dsbG;inference=COORDINATES: protein motif:HMM:NF008657.0;locus_tag=NIV78_RS29550;product=thiol:disulfide interchange protein DsbG;protein_id=WP_251107348.1;transl_table=11 NZ_CP100138.1 RefSeq gene 122375 122740 . + . ID=gene-NIV78_RS29555;Name=NIV78_RS29555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29555 NZ_CP100138.1 GeneMarkS-2+ CDS 122375 122740 . + 0 ID=cds-WP_124837734.1;Parent=gene-NIV78_RS29555;Dbxref=Genbank:WP_124837734.1;Name=WP_124837734.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS29555;product=hypothetical protein;protein_id=WP_124837734.1;transl_table=11 NZ_CP100138.1 RefSeq gene 123292 125043 . + . ID=gene-NIV78_RS29560;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=NIV78_RS29560 NZ_CP100138.1 Protein Homology CDS 123292 125043 . + 0 ID=cds-WP_251107565.1;Parent=gene-NIV78_RS29560;Dbxref=Genbank:WP_251107565.1;Name=WP_251107565.1;Ontology_term=GO:0006869,GO:0005319;gbkey=CDS;gene=msbA;go_function=lipid transporter activity|0005319||IEA;go_process=lipid transport|0006869||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697141.1;locus_tag=NIV78_RS29560;product=lipid A export permease/ATP-binding protein MsbA;protein_id=WP_251107565.1;transl_table=11 NZ_CP100138.1 RefSeq gene 125502 126968 . - . ID=gene-NIV78_RS29565;Name=NIV78_RS29565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29565 NZ_CP100138.1 Protein Homology CDS 125502 126968 . - 0 ID=cds-WP_017923681.1;Parent=gene-NIV78_RS29565;Dbxref=Genbank:WP_017923681.1;Name=WP_017923681.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: protein motif:HMM:TIGR01845.1;locus_tag=NIV78_RS29565;product=efflux transporter outer membrane subunit;protein_id=WP_017923681.1;transl_table=11 NZ_CP100138.1 RefSeq gene 127040 129034 . - . ID=gene-NIV78_RS29570;Name=NIV78_RS29570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29570 NZ_CP100138.1 Protein Homology CDS 127040 129034 . - 0 ID=cds-WP_251107347.1;Parent=gene-NIV78_RS29570;Dbxref=Genbank:WP_251107347.1;Name=WP_251107347.1;Ontology_term=GO:0005524,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008113314.1;locus_tag=NIV78_RS29570;product=MacB family efflux pump subunit;protein_id=WP_251107347.1;transl_table=11 NZ_CP100138.1 RefSeq gene 129039 130220 . - . ID=gene-NIV78_RS29575;Name=NIV78_RS29575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29575 NZ_CP100138.1 Protein Homology CDS 129039 130220 . - 0 ID=cds-WP_017923683.1;Parent=gene-NIV78_RS29575;Dbxref=Genbank:WP_017923683.1;Name=WP_017923683.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875272.1;locus_tag=NIV78_RS29575;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_017923683.1;transl_table=11 NZ_CP100138.1 RefSeq pseudogene 130620 130775 . - . ID=gene-NIV78_RS29580;Name=NIV78_RS29580;end_range=130775,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS29580;partial=true;pseudo=true NZ_CP100138.1 Protein Homology CDS 130620 130775 . - 0 ID=cds-NIV78_RS29580;Parent=gene-NIV78_RS29580;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=130775,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734099.1;locus_tag=NIV78_RS29580;partial=true;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP100138.1 RefSeq gene 130854 131651 . - . ID=gene-NIV78_RS29585;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=NIV78_RS29585 NZ_CP100138.1 Protein Homology CDS 130854 131651 . - 0 ID=cds-WP_012732720.1-5;Parent=gene-NIV78_RS29585;Dbxref=Genbank:WP_012732720.1;Name=WP_012732720.1;Ontology_term=GO:0005524;gbkey=CDS;gene=istB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013700154.1;locus_tag=NIV78_RS29585;product=IS21-like element helper ATPase IstB;protein_id=WP_012732720.1;transl_table=11 NZ_CP100138.1 RefSeq pseudogene 131679 132051 . - . ID=gene-NIV78_RS29590;Name=NIV78_RS29590;end_range=132051,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS29590;partial=true;pseudo=true;start_range=.,131679 NZ_CP100138.1 Protein Homology CDS 131679 132051 . - 0 ID=cds-NIV78_RS29590;Parent=gene-NIV78_RS29590;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=132051,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612028.1;locus_tag=NIV78_RS29590;partial=true;product=IS21 family transposase;pseudo=true;start_range=.,131679;transl_table=11 NZ_CP100138.1 RefSeq pseudogene 132401 133928 . + . ID=gene-NIV78_RS29595;Name=istA;gbkey=Gene;gene=istA;gene_biotype=pseudogene;locus_tag=NIV78_RS29595;pseudo=true NZ_CP100138.1 Protein Homology CDS 132401 133928 . + 0 ID=cds-NIV78_RS29595;Parent=gene-NIV78_RS29595;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611437.1;locus_tag=NIV78_RS29595;product=IS21 family transposase;pseudo=true;transl_table=11 NZ_CP100138.1 RefSeq pseudogene 133944 134692 . + . ID=gene-NIV78_RS29600;Name=istB;gbkey=Gene;gene=istB;gene_biotype=pseudogene;locus_tag=NIV78_RS29600;pseudo=true NZ_CP100138.1 Protein Homology CDS 133944 134692 . + 0 ID=cds-NIV78_RS29600;Parent=gene-NIV78_RS29600;Note=frameshifted;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732736.1;locus_tag=NIV78_RS29600;product=IS21-like element ISBmu3 family helper ATPase IstB;pseudo=true;transl_table=11 NZ_CP100138.1 RefSeq pseudogene 134805 135869 . - . ID=gene-NIV78_RS29605;Name=istA;gbkey=Gene;gene=istA;gene_biotype=pseudogene;locus_tag=NIV78_RS29605;partial=true;pseudo=true;start_range=.,134805 NZ_CP100138.1 Protein Homology CDS 134805 135869 . - 0 ID=cds-NIV78_RS29605;Parent=gene-NIV78_RS29605;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612028.1;locus_tag=NIV78_RS29605;partial=true;product=IS21 family transposase;pseudo=true;start_range=.,134805;transl_table=11 NZ_CP100138.1 RefSeq gene 136068 137315 . - . ID=gene-NIV78_RS29610;Name=NIV78_RS29610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29610 NZ_CP100138.1 Protein Homology CDS 136068 137315 . - 0 ID=cds-WP_017922441.1;Parent=gene-NIV78_RS29610;Dbxref=Genbank:WP_017922441.1;Name=WP_017922441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008898852.1;locus_tag=NIV78_RS29610;product=multidrug effflux MFS transporter;protein_id=WP_017922441.1;transl_table=11 NZ_CP100138.1 RefSeq gene 137496 138098 . - . ID=gene-NIV78_RS29615;Name=NIV78_RS29615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29615 NZ_CP100138.1 Protein Homology CDS 137496 138098 . - 0 ID=cds-WP_251108021.1;Parent=gene-NIV78_RS29615;Dbxref=Genbank:WP_251108021.1;Name=WP_251108021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354772.1;locus_tag=NIV78_RS29615;product=ATP-dependent Clp protease proteolytic subunit;protein_id=WP_251108021.1;transl_table=11 NZ_CP100138.1 RefSeq gene 138152 142759 . - . ID=gene-NIV78_RS29620;Name=NIV78_RS29620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29620 NZ_CP100138.1 Protein Homology CDS 138152 142759 . - 0 ID=cds-WP_251108020.1;Parent=gene-NIV78_RS29620;Dbxref=Genbank:WP_251108020.1;Name=WP_251108020.1;Ontology_term=GO:0009058;gbkey=CDS;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:NF013166.2;locus_tag=NIV78_RS29620;product=thioesterase domain-containing protein;protein_id=WP_251108020.1;transl_table=11 NZ_CP100138.1 RefSeq gene 142789 155229 . - . ID=gene-NIV78_RS29625;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=NIV78_RS29625 NZ_CP100138.1 Protein Homology CDS 142789 155229 . - 0 ID=cds-WP_257758090.1;Parent=gene-NIV78_RS29625;Dbxref=Genbank:WP_257758090.1;Name=WP_257758090.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: protein motif:HMM:NF012873.2;locus_tag=NIV78_RS29625;product=ACP S-malonyltransferase;protein_id=WP_257758090.1;transl_table=11 NZ_CP100138.1 RefSeq gene 155309 156250 . - . ID=gene-NIV78_RS29630;Name=NIV78_RS29630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29630 NZ_CP100138.1 Protein Homology CDS 155309 156250 . - 0 ID=cds-WP_017922445.1;Parent=gene-NIV78_RS29630;Dbxref=Genbank:WP_017922445.1;Name=WP_017922445.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023015.2;locus_tag=NIV78_RS29630;product=diiron oxygenase;protein_id=WP_017922445.1;transl_table=11 NZ_CP100138.1 RefSeq gene 156260 156889 . - . ID=gene-NIV78_RS29635;Name=NIV78_RS29635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29635 NZ_CP100138.1 Protein Homology CDS 156260 156889 . - 0 ID=cds-WP_251108018.1;Parent=gene-NIV78_RS29635;Dbxref=Genbank:WP_251108018.1;Name=WP_251108018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019465850.1;locus_tag=NIV78_RS29635;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=WP_251108018.1;transl_table=11 NZ_CP100138.1 RefSeq gene 156877 158703 . - . ID=gene-NIV78_RS29640;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=NIV78_RS29640 NZ_CP100138.1 Protein Homology CDS 156877 158703 . - 0 ID=cds-WP_251108017.1;Parent=gene-NIV78_RS29640;Dbxref=Genbank:WP_251108017.1;Name=WP_251108017.1;Ontology_term=GO:0008153,GO:0009396,GO:0046820;gbkey=CDS;gene=pabB;go_function=4-amino-4-deoxychorismate synthase activity|0046820||IEA;go_process=para-aminobenzoic acid biosynthetic process|0008153||IEA,folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: protein motif:HMM:TIGR00553.1;locus_tag=NIV78_RS29640;product=aminodeoxychorismate synthase component I;protein_id=WP_251108017.1;transl_table=11 NZ_CP100138.1 RefSeq gene 159291 159581 . + . ID=gene-NIV78_RS29645;Name=NIV78_RS29645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29645 NZ_CP100138.1 GeneMarkS-2+ CDS 159291 159581 . + 0 ID=cds-WP_251108016.1;Parent=gene-NIV78_RS29645;Dbxref=Genbank:WP_251108016.1;Name=WP_251108016.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS29645;product=hypothetical protein;protein_id=WP_251108016.1;transl_table=11 NZ_CP100138.1 RefSeq gene 159556 160491 . - . ID=gene-NIV78_RS29650;Name=NIV78_RS29650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29650 NZ_CP100138.1 GeneMarkS-2+ CDS 159556 160491 . - 0 ID=cds-WP_251108015.1;Parent=gene-NIV78_RS29650;Dbxref=Genbank:WP_251108015.1;Name=WP_251108015.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS29650;product=hypothetical protein;protein_id=WP_251108015.1;transl_table=11 NZ_CP100138.1 RefSeq gene 160771 161184 . + . ID=gene-NIV78_RS29655;Name=NIV78_RS29655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29655 NZ_CP100138.1 Protein Homology CDS 160771 161184 . + 0 ID=cds-WP_251108029.1;Parent=gene-NIV78_RS29655;Dbxref=Genbank:WP_251108029.1;Name=WP_251108029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004534755.1;locus_tag=NIV78_RS29655;product=PAAR domain-containing protein;protein_id=WP_251108029.1;transl_table=11 NZ_CP100138.1 RefSeq gene 161189 161686 . + . ID=gene-NIV78_RS29660;Name=NIV78_RS29660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29660 NZ_CP100138.1 Protein Homology CDS 161189 161686 . + 0 ID=cds-WP_251108014.1;Parent=gene-NIV78_RS29660;Dbxref=Genbank:WP_251108014.1;Name=WP_251108014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401907.1;locus_tag=NIV78_RS29660;product=DUF4123 domain-containing protein;protein_id=WP_251108014.1;transl_table=11 NZ_CP100138.1 RefSeq gene 161679 162146 . + . ID=gene-NIV78_RS29665;Name=NIV78_RS29665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29665 NZ_CP100138.1 Protein Homology CDS 161679 162146 . + 0 ID=cds-WP_251108013.1;Parent=gene-NIV78_RS29665;Dbxref=Genbank:WP_251108013.1;Name=WP_251108013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006050093.1;locus_tag=NIV78_RS29665;product=hypothetical protein;protein_id=WP_251108013.1;transl_table=11 NZ_CP100138.1 RefSeq pseudogene 162034 162626 . + . ID=gene-NIV78_RS29670;Name=NIV78_RS29670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS29670;pseudo=true NZ_CP100138.1 Protein Homology CDS 162034 162626 . + 0 ID=cds-NIV78_RS29670;Parent=gene-NIV78_RS29670;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414264.1;locus_tag=NIV78_RS29670;product=restriction endonuclease fold toxin 5 domain-containing protein;pseudo=true;transl_table=11 NZ_CP100138.1 RefSeq gene 162636 163346 . + . ID=gene-NIV78_RS29675;Name=NIV78_RS29675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29675 NZ_CP100138.1 Protein Homology CDS 162636 163346 . + 0 ID=cds-WP_251108012.1;Parent=gene-NIV78_RS29675;Dbxref=Genbank:WP_251108012.1;Name=WP_251108012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004534505.1;locus_tag=NIV78_RS29675;product=Imm52 family immunity protein;protein_id=WP_251108012.1;transl_table=11 NZ_CP100138.1 RefSeq gene 163710 165185 . - . ID=gene-NIV78_RS29680;Name=NIV78_RS29680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29680 NZ_CP100138.1 Protein Homology CDS 163710 165185 . - 0 ID=cds-WP_257758125.1;Parent=gene-NIV78_RS29680;Dbxref=Genbank:WP_257758125.1;Name=WP_257758125.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333771.1;locus_tag=NIV78_RS29680;product=IS66 family transposase;protein_id=WP_257758125.1;transl_table=11 NZ_CP100138.1 RefSeq gene 165253 166809 . - . ID=gene-NIV78_RS29685;Name=NIV78_RS29685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29685 NZ_CP100138.1 Protein Homology CDS 165253 166809 . - 0 ID=cds-WP_257756899.1-2;Parent=gene-NIV78_RS29685;Dbxref=Genbank:WP_257756899.1;Name=WP_257756899.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875269.1;locus_tag=NIV78_RS29685;product=IS66 family transposase;protein_id=WP_257756899.1;transl_table=11 NZ_CP100138.1 RefSeq gene 166841 167191 . - . ID=gene-NIV78_RS29690;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=NIV78_RS29690 NZ_CP100138.1 Protein Homology CDS 166841 167191 . - 0 ID=cds-WP_257756898.1-2;Parent=gene-NIV78_RS29690;Dbxref=Genbank:WP_257756898.1;Name=WP_257756898.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: protein motif:HMM:NF017528.2;locus_tag=NIV78_RS29690;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_257756898.1;transl_table=11 NZ_CP100138.1 RefSeq gene 167167 167643 . - . ID=gene-NIV78_RS29695;Name=NIV78_RS29695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29695 NZ_CP100138.1 Protein Homology CDS 167167 167643 . - 0 ID=cds-WP_257756897.1-2;Parent=gene-NIV78_RS29695;Dbxref=Genbank:WP_257756897.1;Name=WP_257756897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734051.1;locus_tag=NIV78_RS29695;product=transposase;protein_id=WP_257756897.1;transl_table=11 NZ_CP100138.1 RefSeq gene 167833 168174 . - . ID=gene-NIV78_RS29700;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=NIV78_RS29700 NZ_CP100138.1 Protein Homology CDS 167833 168174 . - 0 ID=cds-WP_257758091.1;Parent=gene-NIV78_RS29700;Dbxref=Genbank:WP_257758091.1;Name=WP_257758091.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: protein motif:HMM:NF017528.2;locus_tag=NIV78_RS29700;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_257758091.1;transl_table=11 NZ_CP100138.1 RefSeq gene 168144 169700 . - . ID=gene-NIV78_RS29705;Name=NIV78_RS29705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29705 NZ_CP100138.1 Protein Homology CDS 168144 169700 . - 0 ID=cds-WP_012732752.1-7;Parent=gene-NIV78_RS29705;Dbxref=Genbank:WP_012732752.1;Name=WP_012732752.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875269.1;locus_tag=NIV78_RS29705;product=IS66 family transposase;protein_id=WP_012732752.1;transl_table=11 NZ_CP100138.1 RefSeq gene 169732 170049 . - . ID=gene-NIV78_RS29710;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=NIV78_RS29710 NZ_CP100138.1 Protein Homology CDS 169732 170049 . - 0 ID=cds-WP_255220049.1;Parent=gene-NIV78_RS29710;Dbxref=Genbank:WP_255220049.1;Name=WP_255220049.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: protein motif:HMM:NF033819.0;locus_tag=NIV78_RS29710;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_255220049.1;transl_table=11 NZ_CP100138.1 RefSeq gene 170125 171260 . - . ID=gene-NIV78_RS29715;Name=NIV78_RS29715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29715 NZ_CP100138.1 Protein Homology CDS 171005 171260 . - 0 ID=cds-WP_161521826.1;Parent=gene-NIV78_RS29715;Dbxref=Genbank:WP_161521826.1;Name=WP_161521826.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612008.1;locus_tag=NIV78_RS29715;product=IS3 family transposase;protein_id=WP_161521826.1;transl_table=11 NZ_CP100138.1 Protein Homology CDS 170125 171005 . - 2 ID=cds-WP_161521826.1;Parent=gene-NIV78_RS29715;Dbxref=Genbank:WP_161521826.1;Name=WP_161521826.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612008.1;locus_tag=NIV78_RS29715;product=IS3 family transposase;protein_id=WP_161521826.1;transl_table=11 NZ_CP100138.1 RefSeq gene 171372 172067 . - . ID=gene-NIV78_RS29720;Name=NIV78_RS29720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29720 NZ_CP100138.1 Protein Homology CDS 171372 172067 . - 0 ID=cds-WP_237657875.1;Parent=gene-NIV78_RS29720;Dbxref=Genbank:WP_237657875.1;Name=WP_237657875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007648091.1;locus_tag=NIV78_RS29720;product=hypothetical protein;protein_id=WP_237657875.1;transl_table=11 NZ_CP100138.1 RefSeq gene 172085 172543 . - . ID=gene-NIV78_RS29725;Name=NIV78_RS29725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29725 NZ_CP100138.1 GeneMarkS-2+ CDS 172085 172543 . - 0 ID=cds-WP_161522096.1;Parent=gene-NIV78_RS29725;Dbxref=Genbank:WP_161522096.1;Name=WP_161522096.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS29725;product=hypothetical protein;protein_id=WP_161522096.1;transl_table=11 NZ_CP100138.1 RefSeq gene 172613 172837 . - . ID=gene-NIV78_RS29730;Name=NIV78_RS29730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29730 NZ_CP100138.1 GeneMarkS-2+ CDS 172613 172837 . - 0 ID=cds-WP_161522097.1;Parent=gene-NIV78_RS29730;Dbxref=Genbank:WP_161522097.1;Name=WP_161522097.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS29730;product=hypothetical protein;protein_id=WP_161522097.1;transl_table=11 NZ_CP100138.1 RefSeq gene 172964 173740 . - . ID=gene-NIV78_RS29735;Name=NIV78_RS29735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29735 NZ_CP100138.1 GeneMarkS-2+ CDS 172964 173740 . - 0 ID=cds-WP_161522098.1;Parent=gene-NIV78_RS29735;Dbxref=Genbank:WP_161522098.1;Name=WP_161522098.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS29735;product=hypothetical protein;protein_id=WP_161522098.1;transl_table=11 NZ_CP100138.1 RefSeq gene 173830 174099 . - . ID=gene-NIV78_RS29740;Name=NIV78_RS29740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29740 NZ_CP100138.1 GeneMarkS-2+ CDS 173830 174099 . - 0 ID=cds-WP_161522099.1;Parent=gene-NIV78_RS29740;Dbxref=Genbank:WP_161522099.1;Name=WP_161522099.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS29740;product=hypothetical protein;protein_id=WP_161522099.1;transl_table=11 NZ_CP100138.1 RefSeq gene 174333 174665 . - . ID=gene-NIV78_RS29745;Name=NIV78_RS29745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29745 NZ_CP100138.1 GeneMarkS-2+ CDS 174333 174665 . - 0 ID=cds-WP_161522100.1;Parent=gene-NIV78_RS29745;Dbxref=Genbank:WP_161522100.1;Name=WP_161522100.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS29745;product=hypothetical protein;protein_id=WP_161522100.1;transl_table=11 NZ_CP100138.1 RefSeq gene 174870 175133 . - . ID=gene-NIV78_RS29750;Name=NIV78_RS29750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29750 NZ_CP100138.1 GeneMarkS-2+ CDS 174870 175133 . - 0 ID=cds-WP_161522101.1;Parent=gene-NIV78_RS29750;Dbxref=Genbank:WP_161522101.1;Name=WP_161522101.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS29750;product=hypothetical protein;protein_id=WP_161522101.1;transl_table=11 NZ_CP100138.1 RefSeq gene 175182 175613 . - . ID=gene-NIV78_RS29755;Name=NIV78_RS29755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29755 NZ_CP100138.1 GeneMarkS-2+ CDS 175182 175613 . - 0 ID=cds-WP_161522102.1;Parent=gene-NIV78_RS29755;Dbxref=Genbank:WP_161522102.1;Name=WP_161522102.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS29755;product=hypothetical protein;protein_id=WP_161522102.1;transl_table=11 NZ_CP100138.1 RefSeq gene 175665 175943 . - . ID=gene-NIV78_RS29760;Name=NIV78_RS29760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29760 NZ_CP100138.1 GeneMarkS-2+ CDS 175665 175943 . - 0 ID=cds-WP_161522103.1;Parent=gene-NIV78_RS29760;Dbxref=Genbank:WP_161522103.1;Name=WP_161522103.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS29760;product=hypothetical protein;protein_id=WP_161522103.1;transl_table=11 NZ_CP100138.1 RefSeq gene 175950 176192 . - . ID=gene-NIV78_RS29765;Name=NIV78_RS29765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29765 NZ_CP100138.1 Protein Homology CDS 175950 176192 . - 0 ID=cds-WP_161522115.1;Parent=gene-NIV78_RS29765;Dbxref=Genbank:WP_161522115.1;Name=WP_161522115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734062.1;locus_tag=NIV78_RS29765;product=hypothetical protein;protein_id=WP_161522115.1;transl_table=11 NZ_CP100138.1 RefSeq gene 176617 178440 . - . ID=gene-NIV78_RS29770;Name=NIV78_RS29770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29770 NZ_CP100138.1 Protein Homology CDS 176617 178440 . - 0 ID=cds-WP_161522104.1;Parent=gene-NIV78_RS29770;Dbxref=Genbank:WP_161522104.1;Name=WP_161522104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402546.1;locus_tag=NIV78_RS29770;product=site-specific integrase;protein_id=WP_161522104.1;transl_table=11 NZ_CP100138.1 RefSeq gene 178437 178613 . - . ID=gene-NIV78_RS29775;Name=NIV78_RS29775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29775 NZ_CP100138.1 GeneMarkS-2+ CDS 178437 178613 . - 0 ID=cds-WP_174525167.1;Parent=gene-NIV78_RS29775;Dbxref=Genbank:WP_174525167.1;Name=WP_174525167.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS29775;product=hypothetical protein;protein_id=WP_174525167.1;transl_table=11 NZ_CP100138.1 RefSeq gene 178675 179541 . - . ID=gene-NIV78_RS29780;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=NIV78_RS29780 NZ_CP100138.1 Protein Homology CDS 178675 179541 . - 0 ID=cds-WP_012732871.1-7;Parent=gene-NIV78_RS29780;Dbxref=Genbank:WP_012732871.1;Name=WP_012732871.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476481.1;locus_tag=NIV78_RS29780;product=IS21-like element ISBcen28 family helper ATPase IstB;protein_id=WP_012732871.1;transl_table=11 NZ_CP100138.1 RefSeq gene 179538 180794 . - . ID=gene-NIV78_RS29785;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=NIV78_RS29785 NZ_CP100138.1 Protein Homology CDS 179538 180794 . - 0 ID=cds-WP_012734039.1-7;Parent=gene-NIV78_RS29785;Dbxref=Genbank:WP_012734039.1;Name=WP_012734039.1;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476480.1;locus_tag=NIV78_RS29785;product=IS21 family transposase;protein_id=WP_012734039.1;transl_table=11 NZ_CP100138.1 RefSeq pseudogene 180920 181618 . + . ID=gene-NIV78_RS29790;Name=NIV78_RS29790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS29790;partial=true;pseudo=true;start_range=.,180920 NZ_CP100138.1 Protein Homology CDS 180920 181618 . + 0 ID=cds-NIV78_RS29790;Parent=gene-NIV78_RS29790;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735330.1;locus_tag=NIV78_RS29790;partial=true;product=error-prone DNA polymerase;pseudo=true;start_range=.,180920;transl_table=11 NZ_CP100138.1 RefSeq gene 181631 181918 . + . ID=gene-NIV78_RS29795;Name=NIV78_RS29795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29795 NZ_CP100138.1 Protein Homology CDS 181631 181918 . + 0 ID=cds-WP_153479215.1;Parent=gene-NIV78_RS29795;Dbxref=Genbank:WP_153479215.1;Name=WP_153479215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735344.1;locus_tag=NIV78_RS29795;product=hypothetical protein;protein_id=WP_153479215.1;transl_table=11 NZ_CP100138.1 RefSeq gene 182019 182261 . - . ID=gene-NIV78_RS29800;Name=NIV78_RS29800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29800 NZ_CP100138.1 Protein Homology CDS 182019 182261 . - 0 ID=cds-WP_012734062.1;Parent=gene-NIV78_RS29800;Dbxref=Genbank:WP_012734062.1;Name=WP_012734062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734062.1;locus_tag=NIV78_RS29800;product=hypothetical protein;protein_id=WP_012734062.1;transl_table=11 NZ_CP100138.1 RefSeq gene 182277 182645 . - . ID=gene-NIV78_RS29805;Name=NIV78_RS29805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29805 NZ_CP100138.1 GeneMarkS-2+ CDS 182277 182645 . - 0 ID=cds-WP_153479214.1;Parent=gene-NIV78_RS29805;Dbxref=Genbank:WP_153479214.1;Name=WP_153479214.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS29805;product=hypothetical protein;protein_id=WP_153479214.1;transl_table=11 NZ_CP100138.1 RefSeq gene 182656 183090 . - . ID=gene-NIV78_RS29810;Name=NIV78_RS29810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29810 NZ_CP100138.1 Protein Homology CDS 182656 183090 . - 0 ID=cds-WP_237657892.1;Parent=gene-NIV78_RS29810;Dbxref=Genbank:WP_237657892.1;Name=WP_237657892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003269001.1;locus_tag=NIV78_RS29810;product=hypothetical protein;protein_id=WP_237657892.1;transl_table=11 NZ_CP100138.1 RefSeq gene 183844 184143 . - . ID=gene-NIV78_RS29815;Name=NIV78_RS29815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29815 NZ_CP100138.1 GeneMarkS-2+ CDS 183844 184143 . - 0 ID=cds-WP_251107943.1;Parent=gene-NIV78_RS29815;Dbxref=Genbank:WP_251107943.1;Name=WP_251107943.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS29815;product=hypothetical protein;protein_id=WP_251107943.1;transl_table=11 NZ_CP100138.1 RefSeq gene 184525 186240 . - . ID=gene-NIV78_RS29820;Name=NIV78_RS29820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29820 NZ_CP100138.1 Protein Homology CDS 184525 186240 . - 0 ID=cds-WP_153479211.1;Parent=gene-NIV78_RS29820;Dbxref=Genbank:WP_153479211.1;Name=WP_153479211.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734074.1;locus_tag=NIV78_RS29820;product=methyl-accepting chemotaxis protein;protein_id=WP_153479211.1;transl_table=11 NZ_CP100138.1 RefSeq pseudogene 186417 187334 . - . ID=gene-NIV78_RS29825;Name=NIV78_RS29825;end_range=187334,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS29825;partial=true;pseudo=true NZ_CP100138.1 Protein Homology CDS 186417 187334 . - 0 ID=cds-NIV78_RS29825;Parent=gene-NIV78_RS29825;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0007165,GO:0016020;end_range=187334,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733754.1;locus_tag=NIV78_RS29825;partial=true;product=methyl-accepting chemotaxis protein;pseudo=true;transl_table=11 NZ_CP100138.1 RefSeq gene 188082 188879 . - . ID=gene-NIV78_RS29830;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=NIV78_RS29830 NZ_CP100138.1 Protein Homology CDS 188082 188879 . - 0 ID=cds-WP_012732720.1-6;Parent=gene-NIV78_RS29830;Dbxref=Genbank:WP_012732720.1;Name=WP_012732720.1;Ontology_term=GO:0005524;gbkey=CDS;gene=istB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013700154.1;locus_tag=NIV78_RS29830;product=IS21-like element helper ATPase IstB;protein_id=WP_012732720.1;transl_table=11 NZ_CP100138.1 RefSeq gene 188872 190377 . - . ID=gene-NIV78_RS29835;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=NIV78_RS29835 NZ_CP100138.1 Protein Homology CDS 188872 190377 . - 0 ID=cds-WP_012732721.1-5;Parent=gene-NIV78_RS29835;Dbxref=Genbank:WP_012732721.1;Name=WP_012732721.1;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546517.1;locus_tag=NIV78_RS29835;product=IS21 family transposase;protein_id=WP_012732721.1;transl_table=11 NZ_CP100138.1 RefSeq pseudogene 190491 190871 . - . ID=gene-NIV78_RS29840;Name=NIV78_RS29840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS29840;partial=true;pseudo=true;start_range=.,190491 NZ_CP100138.1 Protein Homology CDS 190491 190871 . - 0 ID=cds-NIV78_RS29840;Parent=gene-NIV78_RS29840;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012433046.1;locus_tag=NIV78_RS29840;partial=true;product=low affinity iron permease family protein;pseudo=true;start_range=.,190491;transl_table=11 NZ_CP100138.1 RefSeq gene 191157 191600 . - . ID=gene-NIV78_RS29845;Name=NIV78_RS29845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29845 NZ_CP100138.1 Protein Homology CDS 191157 191600 . - 0 ID=cds-WP_153479209.1;Parent=gene-NIV78_RS29845;Dbxref=Genbank:WP_153479209.1;Name=WP_153479209.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=NIV78_RS29845;product=response regulator;protein_id=WP_153479209.1;transl_table=11 NZ_CP100138.1 RefSeq gene 192108 192518 . + . ID=gene-NIV78_RS29850;Name=NIV78_RS29850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29850 NZ_CP100138.1 Protein Homology CDS 192108 192518 . + 0 ID=cds-WP_012732719.1;Parent=gene-NIV78_RS29850;Dbxref=Genbank:WP_012732719.1;Name=WP_012732719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732719.1;locus_tag=NIV78_RS29850;product=manganese catalase family protein;protein_id=WP_012732719.1;transl_table=11 NZ_CP100138.1 RefSeq pseudogene 192451 192651 . - . ID=gene-NIV78_RS29855;Name=NIV78_RS29855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS29855;partial=true;pseudo=true;start_range=.,192451 NZ_CP100138.1 Protein Homology CDS 192451 192651 . - 0 ID=cds-NIV78_RS29855;Parent=gene-NIV78_RS29855;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020068335.1;locus_tag=NIV78_RS29855;partial=true;product=DUF892 family protein;pseudo=true;start_range=.,192451;transl_table=11 NZ_CP100138.1 RefSeq gene 192889 194241 . + . ID=gene-NIV78_RS29860;Name=NIV78_RS29860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29860 NZ_CP100138.1 Protein Homology CDS 192889 194241 . + 0 ID=cds-WP_012732718.1;Parent=gene-NIV78_RS29860;Dbxref=Genbank:WP_012732718.1;Name=WP_012732718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732718.1;locus_tag=NIV78_RS29860;product=sigma-54 dependent transcriptional regulator;protein_id=WP_012732718.1;transl_table=11 NZ_CP100138.1 RefSeq gene 194611 195339 . - . ID=gene-NIV78_RS29865;Name=NIV78_RS29865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29865 NZ_CP100138.1 Protein Homology CDS 194611 195339 . - 0 ID=cds-WP_257758094.1;Parent=gene-NIV78_RS29865;Dbxref=Genbank:WP_257758094.1;Name=WP_257758094.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732717.1;locus_tag=NIV78_RS29865;product=IS6 family transposase;protein_id=WP_257758094.1;transl_table=11 NZ_CP100138.1 RefSeq gene 195385 195870 . - . ID=gene-NIV78_RS29870;Name=NIV78_RS29870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29870 NZ_CP100138.1 Protein Homology CDS 195385 195870 . - 0 ID=cds-WP_257758126.1;Parent=gene-NIV78_RS29870;Dbxref=Genbank:WP_257758126.1;Name=WP_257758126.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732716.1;locus_tag=NIV78_RS29870;product=type II secretion system protein;protein_id=WP_257758126.1;transl_table=11 NZ_CP100138.1 RefSeq gene 195980 196657 . - . ID=gene-NIV78_RS29875;Name=NIV78_RS29875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29875 NZ_CP100138.1 Protein Homology CDS 195980 196657 . - 0 ID=cds-WP_257758095.1;Parent=gene-NIV78_RS29875;Dbxref=Genbank:WP_257758095.1;Name=WP_257758095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732715.1;locus_tag=NIV78_RS29875;product=hypothetical protein;protein_id=WP_257758095.1;transl_table=11 NZ_CP100138.1 RefSeq pseudogene 197045 197850 . - . ID=gene-NIV78_RS29880;Name=NIV78_RS29880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS29880;pseudo=true NZ_CP100138.1 Protein Homology CDS 197045 197850 . - 0 ID=cds-NIV78_RS29880;Parent=gene-NIV78_RS29880;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611183.1;locus_tag=NIV78_RS29880;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP100138.1 RefSeq gene 198031 198438 . - . ID=gene-NIV78_RS29885;Name=NIV78_RS29885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29885 NZ_CP100138.1 Protein Homology CDS 198031 198438 . - 0 ID=cds-WP_232252319.1;Parent=gene-NIV78_RS29885;Dbxref=Genbank:WP_232252319.1;Name=WP_232252319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425516.1;locus_tag=NIV78_RS29885;product=hypothetical protein;protein_id=WP_232252319.1;transl_table=11 NZ_CP100138.1 RefSeq gene 198541 200376 . - . ID=gene-NIV78_RS29890;Name=NIV78_RS29890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29890 NZ_CP100138.1 Protein Homology CDS 198541 200376 . - 0 ID=cds-WP_257758127.1;Parent=gene-NIV78_RS29890;Dbxref=Genbank:WP_257758127.1;Name=WP_257758127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013700073.1;locus_tag=NIV78_RS29890;product=site-specific integrase;protein_id=WP_257758127.1;transl_table=11 NZ_CP100138.1 RefSeq gene 200379 200720 . - . ID=gene-NIV78_RS29895;Name=NIV78_RS29895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29895 NZ_CP100138.1 Protein Homology CDS 200379 200720 . - 0 ID=cds-WP_257758096.1;Parent=gene-NIV78_RS29895;Dbxref=Genbank:WP_257758096.1;Name=WP_257758096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732710.1;locus_tag=NIV78_RS29895;product=hypothetical protein;protein_id=WP_257758096.1;transl_table=11 NZ_CP100138.1 RefSeq gene 200777 201022 . - . ID=gene-NIV78_RS29900;Name=NIV78_RS29900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29900 NZ_CP100138.1 GeneMarkS-2+ CDS 200777 201022 . - 0 ID=cds-WP_127913916.1;Parent=gene-NIV78_RS29900;Dbxref=Genbank:WP_127913916.1;Name=WP_127913916.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS29900;product=hypothetical protein;protein_id=WP_127913916.1;transl_table=11 NZ_CP100138.1 RefSeq gene 201040 201285 . + . ID=gene-NIV78_RS29905;Name=NIV78_RS29905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29905 NZ_CP100138.1 GeneMarkS-2+ CDS 201040 201285 . + 0 ID=cds-WP_257758097.1;Parent=gene-NIV78_RS29905;Dbxref=Genbank:WP_257758097.1;Name=WP_257758097.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS29905;product=hypothetical protein;protein_id=WP_257758097.1;transl_table=11 NZ_CP100138.1 RefSeq gene 201274 201558 . - . ID=gene-NIV78_RS29910;Name=NIV78_RS29910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29910 NZ_CP100138.1 GeneMarkS-2+ CDS 201274 201558 . - 0 ID=cds-WP_017432347.1;Parent=gene-NIV78_RS29910;Dbxref=Genbank:WP_017432347.1;Name=WP_017432347.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS29910;product=hypothetical protein;protein_id=WP_017432347.1;transl_table=11 NZ_CP100138.1 RefSeq gene 201951 202148 . - . ID=gene-NIV78_RS29915;Name=NIV78_RS29915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29915 NZ_CP100138.1 GeneMarkS-2+ CDS 201951 202148 . - 0 ID=cds-WP_127840952.1;Parent=gene-NIV78_RS29915;Dbxref=Genbank:WP_127840952.1;Name=WP_127840952.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS29915;product=hypothetical protein;protein_id=WP_127840952.1;transl_table=11 NZ_CP100138.1 RefSeq gene 202309 202842 . - . ID=gene-NIV78_RS29920;Name=NIV78_RS29920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29920 NZ_CP100138.1 Protein Homology CDS 202309 202842 . - 0 ID=cds-WP_017924249.1;Parent=gene-NIV78_RS29920;Dbxref=Genbank:WP_017924249.1;Name=WP_017924249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880200.1;locus_tag=NIV78_RS29920;product=RES family NAD+ phosphorylase;protein_id=WP_017924249.1;transl_table=11 NZ_CP100138.1 RefSeq gene 202839 203264 . - . ID=gene-NIV78_RS29925;Name=NIV78_RS29925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29925 NZ_CP100138.1 Protein Homology CDS 202839 203264 . - 0 ID=cds-WP_017924250.1;Parent=gene-NIV78_RS29925;Dbxref=Genbank:WP_017924250.1;Name=WP_017924250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732708.1;locus_tag=NIV78_RS29925;product=DUF2384 domain-containing protein;protein_id=WP_017924250.1;transl_table=11 NZ_CP100138.1 RefSeq gene 203411 203596 . - . ID=gene-NIV78_RS29930;Name=NIV78_RS29930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29930 NZ_CP100138.1 GeneMarkS-2+ CDS 203411 203596 . - 0 ID=cds-WP_171467077.1;Parent=gene-NIV78_RS29930;Dbxref=Genbank:WP_171467077.1;Name=WP_171467077.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS29930;product=hypothetical protein;protein_id=WP_171467077.1;transl_table=11 ##sequence-region NZ_CP100139.1 1 170947 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=337 NZ_CP100139.1 RefSeq region 1 170947 . + . ID=NZ_CP100139.1:1..170947;Dbxref=taxon:337;Is_circular=true;Name=p932p;collection-date=2018;country=South Korea: Taean-gun;gbkey=Src;genome=plasmid;mol_type=genomic DNA;plasmid-name=p932p;strain=R93 NZ_CP100139.1 RefSeq gene 101 745 . + . ID=gene-NIV78_RS29935;Name=NIV78_RS29935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29935 NZ_CP100139.1 Protein Homology CDS 101 745 . + 0 ID=cds-WP_017432350.1;Parent=gene-NIV78_RS29935;Dbxref=Genbank:WP_017432350.1;Name=WP_017432350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699797.1;locus_tag=NIV78_RS29935;product=AAA family ATPase;protein_id=WP_017432350.1;transl_table=11 NZ_CP100139.1 RefSeq gene 748 1785 . + . ID=gene-NIV78_RS29940;Name=NIV78_RS29940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29940 NZ_CP100139.1 Protein Homology CDS 748 1785 . + 0 ID=cds-WP_017432351.1;Parent=gene-NIV78_RS29940;Dbxref=Genbank:WP_017432351.1;Name=WP_017432351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735261.1;locus_tag=NIV78_RS29940;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_017432351.1;transl_table=11 NZ_CP100139.1 RefSeq gene 1870 3174 . - . ID=gene-NIV78_RS29945;Name=NIV78_RS29945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29945 NZ_CP100139.1 Protein Homology CDS 1870 3174 . - 0 ID=cds-WP_017432352.1;Parent=gene-NIV78_RS29945;Dbxref=Genbank:WP_017432352.1;Name=WP_017432352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011875475.1;locus_tag=NIV78_RS29945;product=replication initiation protein;protein_id=WP_017432352.1;transl_table=11 NZ_CP100139.1 RefSeq gene 4703 5602 . - . ID=gene-NIV78_RS29950;Name=NIV78_RS29950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29950 NZ_CP100139.1 Protein Homology CDS 4703 5602 . - 0 ID=cds-WP_257758134.1;Parent=gene-NIV78_RS29950;Dbxref=Genbank:WP_257758134.1;Name=WP_257758134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732804.1;locus_tag=NIV78_RS29950;product=Crp/Fnr family transcriptional regulator;protein_id=WP_257758134.1;transl_table=11 NZ_CP100139.1 RefSeq gene 6019 7356 . - . ID=gene-NIV78_RS29955;Name=NIV78_RS29955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29955 NZ_CP100139.1 Protein Homology CDS 6019 7356 . - 0 ID=cds-WP_017923863.1;Parent=gene-NIV78_RS29955;Dbxref=Genbank:WP_017923863.1;Name=WP_017923863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424105.1;locus_tag=NIV78_RS29955;product=DUF1173 domain-containing protein;protein_id=WP_017923863.1;transl_table=11 NZ_CP100139.1 RefSeq gene 7371 7790 . - . ID=gene-NIV78_RS29960;Name=NIV78_RS29960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29960 NZ_CP100139.1 Protein Homology CDS 7371 7790 . - 0 ID=cds-WP_237657883.1;Parent=gene-NIV78_RS29960;Dbxref=Genbank:WP_237657883.1;Name=WP_237657883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424104.1;locus_tag=NIV78_RS29960;product=hypothetical protein;protein_id=WP_237657883.1;transl_table=11 NZ_CP100139.1 RefSeq gene 7787 8440 . - . ID=gene-NIV78_RS29965;Name=NIV78_RS29965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29965 NZ_CP100139.1 Protein Homology CDS 7787 8440 . - 0 ID=cds-WP_017923861.1;Parent=gene-NIV78_RS29965;Dbxref=Genbank:WP_017923861.1;Name=WP_017923861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732807.1;locus_tag=NIV78_RS29965;product=hypothetical protein;protein_id=WP_017923861.1;transl_table=11 NZ_CP100139.1 RefSeq gene 8457 9665 . - . ID=gene-NIV78_RS29970;Name=NIV78_RS29970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29970 NZ_CP100139.1 Protein Homology CDS 8457 9665 . - 0 ID=cds-WP_257758135.1;Parent=gene-NIV78_RS29970;Dbxref=Genbank:WP_257758135.1;Name=WP_257758135.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015831.2;locus_tag=NIV78_RS29970;product=YadA-like family protein;protein_id=WP_257758135.1;transl_table=11 NZ_CP100139.1 RefSeq pseudogene 9708 9761 . - . ID=gene-NIV78_RS29975;Name=NIV78_RS29975;end_range=9761,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS29975;partial=true;pseudo=true;start_range=.,9708 NZ_CP100139.1 Protein Homology CDS 9708 9761 . - 0 ID=cds-NIV78_RS29975;Parent=gene-NIV78_RS29975;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=9761,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017476.2;locus_tag=NIV78_RS29975;partial=true;product=hypothetical protein;pseudo=true;start_range=.,9708;transl_table=11 NZ_CP100139.1 RefSeq gene 9829 10557 . - . ID=gene-NIV78_RS29980;Name=NIV78_RS29980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29980 NZ_CP100139.1 Protein Homology CDS 9829 10557 . - 0 ID=cds-WP_252836676.1;Parent=gene-NIV78_RS29980;Dbxref=Genbank:WP_252836676.1;Name=WP_252836676.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732717.1;locus_tag=NIV78_RS29980;product=IS6 family transposase;protein_id=WP_252836676.1;transl_table=11 NZ_CP100139.1 RefSeq gene 10600 11244 . + . ID=gene-NIV78_RS29985;Name=NIV78_RS29985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29985 NZ_CP100139.1 Protein Homology CDS 10600 11244 . + 0 ID=cds-WP_254220801.1;Parent=gene-NIV78_RS29985;Dbxref=Genbank:WP_254220801.1;Name=WP_254220801.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=NIV78_RS29985;product=tyrosine-type recombinase/integrase;protein_id=WP_254220801.1;transl_table=11 NZ_CP100139.1 RefSeq gene 11347 11754 . + . ID=gene-NIV78_RS29990;Name=NIV78_RS29990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29990 NZ_CP100139.1 Protein Homology CDS 11347 11754 . + 0 ID=cds-WP_230674618.1;Parent=gene-NIV78_RS29990;Dbxref=Genbank:WP_230674618.1;Name=WP_230674618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425516.1;locus_tag=NIV78_RS29990;product=hypothetical protein;protein_id=WP_230674618.1;transl_table=11 NZ_CP100139.1 RefSeq gene 12017 12268 . + . ID=gene-NIV78_RS29995;Name=NIV78_RS29995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS29995 NZ_CP100139.1 Protein Homology CDS 12017 12268 . + 0 ID=cds-WP_012734108.1;Parent=gene-NIV78_RS29995;Dbxref=Genbank:WP_012734108.1;Name=WP_012734108.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734108.1;locus_tag=NIV78_RS29995;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=WP_012734108.1;transl_table=11 NZ_CP100139.1 RefSeq gene 12262 12612 . + . ID=gene-NIV78_RS30000;Name=NIV78_RS30000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30000 NZ_CP100139.1 Protein Homology CDS 12262 12612 . + 0 ID=cds-WP_012734107.1;Parent=gene-NIV78_RS30000;Dbxref=Genbank:WP_012734107.1;Name=WP_012734107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000239577.1;locus_tag=NIV78_RS30000;product=type II toxin-antitoxin system ChpB family toxin;protein_id=WP_012734107.1;transl_table=11 NZ_CP100139.1 RefSeq gene 12671 12865 . + . ID=gene-NIV78_RS30005;Name=NIV78_RS30005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30005 NZ_CP100139.1 GeneMarkS-2+ CDS 12671 12865 . + 0 ID=cds-WP_124837685.1;Parent=gene-NIV78_RS30005;Dbxref=Genbank:WP_124837685.1;Name=WP_124837685.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS30005;product=hypothetical protein;protein_id=WP_124837685.1;transl_table=11 NZ_CP100139.1 RefSeq gene 13015 13236 . + . ID=gene-NIV78_RS30010;Name=NIV78_RS30010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30010 NZ_CP100139.1 GeneMarkS-2+ CDS 13015 13236 . + 0 ID=cds-WP_017433768.1;Parent=gene-NIV78_RS30010;Dbxref=Genbank:WP_017433768.1;Name=WP_017433768.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS30010;product=hypothetical protein;protein_id=WP_017433768.1;transl_table=11 NZ_CP100139.1 RefSeq gene 13459 13923 . + . ID=gene-NIV78_RS30015;Name=NIV78_RS30015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30015 NZ_CP100139.1 Protein Homology CDS 13459 13923 . + 0 ID=cds-WP_012734106.1;Parent=gene-NIV78_RS30015;Dbxref=Genbank:WP_012734106.1;Name=WP_012734106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733846.1;locus_tag=NIV78_RS30015;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_012734106.1;transl_table=11 NZ_CP100139.1 RefSeq gene 14225 16612 . + . ID=gene-NIV78_RS30020;Name=NIV78_RS30020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30020 NZ_CP100139.1 Protein Homology CDS 14225 16612 . + 0 ID=cds-WP_051071184.1;Parent=gene-NIV78_RS30020;Dbxref=Genbank:WP_051071184.1;Name=WP_051071184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689051.1;locus_tag=NIV78_RS30020;product=TonB-dependent receptor;protein_id=WP_051071184.1;transl_table=11 NZ_CP100139.1 RefSeq gene 16644 17390 . + . ID=gene-NIV78_RS30025;Name=NIV78_RS30025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30025 NZ_CP100139.1 Protein Homology CDS 16644 17390 . + 0 ID=cds-WP_232252306.1;Parent=gene-NIV78_RS30025;Dbxref=Genbank:WP_232252306.1;Name=WP_232252306.1;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733848.1;locus_tag=NIV78_RS30025;product=energy transducer TonB;protein_id=WP_232252306.1;transl_table=11 NZ_CP100139.1 RefSeq gene 17414 18148 . + . ID=gene-NIV78_RS30030;Name=NIV78_RS30030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30030 NZ_CP100139.1 Protein Homology CDS 17414 18148 . + 0 ID=cds-WP_012733849.1-2;Parent=gene-NIV78_RS30030;Dbxref=Genbank:WP_012733849.1;Name=WP_012733849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733849.1;locus_tag=NIV78_RS30030;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_012733849.1;transl_table=11 NZ_CP100139.1 RefSeq gene 18163 18585 . + . ID=gene-NIV78_RS30035;Name=NIV78_RS30035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30035 NZ_CP100139.1 Protein Homology CDS 18163 18585 . + 0 ID=cds-WP_012734103.1;Parent=gene-NIV78_RS30035;Dbxref=Genbank:WP_012734103.1;Name=WP_012734103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733850.1;locus_tag=NIV78_RS30035;product=biopolymer transporter ExbD;protein_id=WP_012734103.1;transl_table=11 NZ_CP100139.1 RefSeq gene 18693 20354 . + . ID=gene-NIV78_RS30040;Name=NIV78_RS30040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30040 NZ_CP100139.1 Protein Homology CDS 18693 20354 . + 0 ID=cds-WP_257758136.1;Parent=gene-NIV78_RS30040;Dbxref=Genbank:WP_257758136.1;Name=WP_257758136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734102.1;locus_tag=NIV78_RS30040;product=ABC transporter ATP-binding protein/permease;protein_id=WP_257758136.1;transl_table=11 NZ_CP100139.1 RefSeq gene 20436 21674 . + . ID=gene-NIV78_RS30045;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=NIV78_RS30045 NZ_CP100139.1 Protein Homology CDS 20436 21674 . + 0 ID=cds-WP_100556612.1;Parent=gene-NIV78_RS30045;Dbxref=Genbank:WP_100556612.1;Name=WP_100556612.1;Ontology_term=GO:0015036,GO:0005737;gbkey=CDS;gene=trxA;go_component=cytoplasm|0005737||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877611.1;locus_tag=NIV78_RS30045;product=thioredoxin;protein_id=WP_100556612.1;transl_table=11 NZ_CP100139.1 RefSeq pseudogene 21972 22340 . + . ID=gene-NIV78_RS30050;Name=NIV78_RS30050;end_range=22340,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS30050;partial=true;pseudo=true NZ_CP100139.1 Protein Homology CDS 21972 22340 . + 0 ID=cds-NIV78_RS30050;Parent=gene-NIV78_RS30050;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=22340,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018420346.1;locus_tag=NIV78_RS30050;partial=true;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CP100139.1 RefSeq gene 22496 23611 . - . ID=gene-NIV78_RS30055;Name=sfnG;gbkey=Gene;gene=sfnG;gene_biotype=protein_coding;locus_tag=NIV78_RS30055 NZ_CP100139.1 Protein Homology CDS 22496 23611 . - 0 ID=cds-WP_012734101.1;Parent=gene-NIV78_RS30055;Dbxref=Genbank:WP_012734101.1;Name=WP_012734101.1;Ontology_term=GO:0006790,GO:0004497,GO:0010181;gbkey=CDS;gene=sfnG;go_function=monooxygenase activity|0004497||IEA,FMN binding|0010181||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734101.1;locus_tag=NIV78_RS30055;product=dimethyl sulfone monooxygenase SfnG;protein_id=WP_012734101.1;transl_table=11 NZ_CP100139.1 RefSeq gene 23641 24264 . - . ID=gene-NIV78_RS30060;Name=msuE;gbkey=Gene;gene=msuE;gene_biotype=protein_coding;locus_tag=NIV78_RS30060 NZ_CP100139.1 Protein Homology CDS 23641 24264 . - 0 ID=cds-WP_045678665.1;Parent=gene-NIV78_RS30060;Dbxref=Genbank:WP_045678665.1;Name=WP_045678665.1;Ontology_term=GO:0016491;gbkey=CDS;gene=msuE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734100.1;locus_tag=NIV78_RS30060;product=FMN reductase;protein_id=WP_045678665.1;transl_table=11 NZ_CP100139.1 RefSeq gene 25103 26218 . + . ID=gene-NIV78_RS30065;Name=NIV78_RS30065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30065 NZ_CP100139.1 Protein Homology CDS 25103 26218 . + 0 ID=cds-WP_017923789.1;Parent=gene-NIV78_RS30065;Dbxref=Genbank:WP_017923789.1;Name=WP_017923789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734097.1;locus_tag=NIV78_RS30065;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=WP_017923789.1;transl_table=11 NZ_CP100139.1 RefSeq gene 26578 26838 . + . ID=gene-NIV78_RS30070;Name=NIV78_RS30070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30070 NZ_CP100139.1 Protein Homology CDS 26578 26838 . + 0 ID=cds-WP_237657893.1;Parent=gene-NIV78_RS30070;Dbxref=Genbank:WP_237657893.1;Name=WP_237657893.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=NIV78_RS30070;product=tyrosine-type recombinase/integrase;protein_id=WP_237657893.1;transl_table=11 NZ_CP100139.1 RefSeq pseudogene 27160 28224 . + . ID=gene-NIV78_RS30075;Name=istA;end_range=28224,.;gbkey=Gene;gene=istA;gene_biotype=pseudogene;locus_tag=NIV78_RS30075;partial=true;pseudo=true NZ_CP100139.1 Protein Homology CDS 27160 28224 . + 0 ID=cds-NIV78_RS30075;Parent=gene-NIV78_RS30075;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=28224,.;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612028.1;locus_tag=NIV78_RS30075;partial=true;product=IS21 family transposase;pseudo=true;transl_table=11 NZ_CP100139.1 RefSeq gene 28337 29086 . - . ID=gene-NIV78_RS30080;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=NIV78_RS30080 NZ_CP100139.1 Protein Homology CDS 28337 29086 . - 0 ID=cds-WP_006400877.1-3;Parent=gene-NIV78_RS30080;Dbxref=Genbank:WP_006400877.1;Name=WP_006400877.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732736.1;locus_tag=NIV78_RS30080;product=IS21-like element ISBmu3 family helper ATPase IstB;protein_id=WP_006400877.1;transl_table=11 NZ_CP100139.1 RefSeq gene 29102 30652 . - . ID=gene-NIV78_RS30085;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=NIV78_RS30085 NZ_CP100139.1 Protein Homology CDS 29102 30652 . - 0 ID=cds-WP_153477359.1-3;Parent=gene-NIV78_RS30085;Dbxref=Genbank:WP_153477359.1;Name=WP_153477359.1;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213865.1;locus_tag=NIV78_RS30085;product=IS21 family transposase;protein_id=WP_153477359.1;transl_table=11 NZ_CP100139.1 RefSeq gene 30701 30838 . + . ID=gene-NIV78_RS30090;Name=NIV78_RS30090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30090 NZ_CP100139.1 Protein Homology CDS 30701 30838 . + 0 ID=cds-WP_017924734.1-3;Parent=gene-NIV78_RS30090;Dbxref=Genbank:WP_017924734.1;Name=WP_017924734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400880.1;locus_tag=NIV78_RS30090;product=hypothetical protein;protein_id=WP_017924734.1;transl_table=11 NZ_CP100139.1 RefSeq pseudogene 30985 31395 . + . ID=gene-NIV78_RS30095;Name=NIV78_RS30095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS30095;partial=true;pseudo=true;start_range=.,30985 NZ_CP100139.1 Protein Homology CDS 30985 31395 . + 0 ID=cds-NIV78_RS30095;Parent=gene-NIV78_RS30095;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612028.1;locus_tag=NIV78_RS30095;partial=true;product=IS21 family transposase;pseudo=true;start_range=.,30985;transl_table=11 NZ_CP100139.1 RefSeq gene 31388 32185 . + . ID=gene-NIV78_RS30100;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=NIV78_RS30100 NZ_CP100139.1 Protein Homology CDS 31388 32185 . + 0 ID=cds-WP_012732720.1-7;Parent=gene-NIV78_RS30100;Dbxref=Genbank:WP_012732720.1;Name=WP_012732720.1;Ontology_term=GO:0005524;gbkey=CDS;gene=istB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013700154.1;locus_tag=NIV78_RS30100;product=IS21-like element helper ATPase IstB;protein_id=WP_012732720.1;transl_table=11 NZ_CP100139.1 RefSeq pseudogene 32665 32763 . + . ID=gene-NIV78_RS30105;Name=NIV78_RS30105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS30105;partial=true;pseudo=true;start_range=.,32665 NZ_CP100139.1 Protein Homology CDS 32665 32763 . + 0 ID=cds-NIV78_RS30105;Parent=gene-NIV78_RS30105;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732717.1;locus_tag=NIV78_RS30105;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,32665;transl_table=11 NZ_CP100139.1 RefSeq gene 32932 33711 . - . ID=gene-NIV78_RS30110;Name=NIV78_RS30110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30110 NZ_CP100139.1 Protein Homology CDS 32932 33711 . - 0 ID=cds-WP_157384131.1;Parent=gene-NIV78_RS30110;Dbxref=Genbank:WP_157384131.1;Name=WP_157384131.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013429.2;locus_tag=NIV78_RS30110;product=TIM barrel protein;protein_id=WP_157384131.1;transl_table=11 NZ_CP100139.1 RefSeq gene 33767 34399 . - . ID=gene-NIV78_RS30115;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=NIV78_RS30115 NZ_CP100139.1 Protein Homology CDS 33767 34399 . - 0 ID=cds-WP_039202354.1;Parent=gene-NIV78_RS30115;Dbxref=Genbank:WP_039202354.1;Name=WP_039202354.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011490838.1;locus_tag=NIV78_RS30115;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_039202354.1;transl_table=11 NZ_CP100139.1 RefSeq gene 34402 35826 . - . ID=gene-NIV78_RS30120;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=NIV78_RS30120 NZ_CP100139.1 Protein Homology CDS 34402 35826 . - 0 ID=cds-WP_017923146.1;Parent=gene-NIV78_RS30120;Dbxref=Genbank:WP_017923146.1;Name=WP_017923146.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011829757.1;locus_tag=NIV78_RS30120;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_017923146.1;transl_table=11 NZ_CP100139.1 RefSeq gene 35870 37042 . - . ID=gene-NIV78_RS30125;Name=NIV78_RS30125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30125 NZ_CP100139.1 Protein Homology CDS 35870 37042 . - 0 ID=cds-WP_039202356.1;Parent=gene-NIV78_RS30125;Dbxref=Genbank:WP_039202356.1;Name=WP_039202356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007583823.1;locus_tag=NIV78_RS30125;product=CoA transferase;protein_id=WP_039202356.1;transl_table=11 NZ_CP100139.1 RefSeq gene 37114 38697 . - . ID=gene-NIV78_RS30130;Name=NIV78_RS30130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30130 NZ_CP100139.1 Protein Homology CDS 37114 38697 . - 0 ID=cds-WP_017923148.1;Parent=gene-NIV78_RS30130;Dbxref=Genbank:WP_017923148.1;Name=WP_017923148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697501.1;locus_tag=NIV78_RS30130;product=bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;protein_id=WP_017923148.1;transl_table=11 NZ_CP100139.1 RefSeq gene 38758 39564 . - . ID=gene-NIV78_RS30135;Name=NIV78_RS30135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30135 NZ_CP100139.1 Protein Homology CDS 38758 39564 . - 0 ID=cds-WP_017923149.1;Parent=gene-NIV78_RS30135;Dbxref=Genbank:WP_017923149.1;Name=WP_017923149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007731319.1;locus_tag=NIV78_RS30135;product=citryl-CoA lyase;protein_id=WP_017923149.1;transl_table=11 NZ_CP100139.1 RefSeq gene 39583 40461 . - . ID=gene-NIV78_RS30140;Name=NIV78_RS30140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30140 NZ_CP100139.1 Protein Homology CDS 39583 40461 . - 0 ID=cds-WP_017923150.1;Parent=gene-NIV78_RS30140;Dbxref=Genbank:WP_017923150.1;Name=WP_017923150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697499.1;locus_tag=NIV78_RS30140;product=intradiol ring-cleavage dioxygenase;protein_id=WP_017923150.1;transl_table=11 NZ_CP100139.1 RefSeq gene 40636 41553 . + . ID=gene-NIV78_RS30145;Name=NIV78_RS30145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30145 NZ_CP100139.1 Protein Homology CDS 40636 41553 . + 0 ID=cds-WP_039202362.1;Parent=gene-NIV78_RS30145;Dbxref=Genbank:WP_039202362.1;Name=WP_039202362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697498.1;locus_tag=NIV78_RS30145;product=LysR substrate-binding domain-containing protein;protein_id=WP_039202362.1;transl_table=11 NZ_CP100139.1 RefSeq gene 41796 43118 . + . ID=gene-NIV78_RS30150;Name=NIV78_RS30150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30150 NZ_CP100139.1 Protein Homology CDS 41796 43118 . + 0 ID=cds-WP_171467056.1;Parent=gene-NIV78_RS30150;Dbxref=Genbank:WP_171467056.1;Name=WP_171467056.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011003443.1;locus_tag=NIV78_RS30150;product=IS701 family transposase;protein_id=WP_171467056.1;transl_table=11 NZ_CP100139.1 RefSeq pseudogene 43763 44248 . + . ID=gene-NIV78_RS30155;Name=NIV78_RS30155;end_range=44248,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS30155;partial=true;pseudo=true NZ_CP100139.1 Protein Homology CDS 43763 44248 . + 0 ID=cds-NIV78_RS30155;Parent=gene-NIV78_RS30155;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=44248,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024408.2;locus_tag=NIV78_RS30155;partial=true;product=IS66 family transposase zinc-finger binding domain-containing protein;pseudo=true;transl_table=11 NZ_CP100139.1 RefSeq gene 44326 44976 . + . ID=gene-NIV78_RS30160;Name=NIV78_RS30160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30160 NZ_CP100139.1 Protein Homology CDS 44326 44976 . + 0 ID=cds-WP_257758140.1;Parent=gene-NIV78_RS30160;Dbxref=Genbank:WP_257758140.1;Name=WP_257758140.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF015038.2;locus_tag=NIV78_RS30160;product=IS66 family transposase;protein_id=WP_257758140.1;transl_table=11 NZ_CP100139.1 RefSeq gene 45061 46317 . + . ID=gene-NIV78_RS30165;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=NIV78_RS30165 NZ_CP100139.1 Protein Homology CDS 45061 46317 . + 0 ID=cds-WP_012734039.1-8;Parent=gene-NIV78_RS30165;Dbxref=Genbank:WP_012734039.1;Name=WP_012734039.1;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476480.1;locus_tag=NIV78_RS30165;product=IS21 family transposase;protein_id=WP_012734039.1;transl_table=11 NZ_CP100139.1 RefSeq gene 46314 47180 . + . ID=gene-NIV78_RS30170;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=NIV78_RS30170 NZ_CP100139.1 Protein Homology CDS 46314 47180 . + 0 ID=cds-WP_012732871.1-8;Parent=gene-NIV78_RS30170;Dbxref=Genbank:WP_012732871.1;Name=WP_012732871.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476481.1;locus_tag=NIV78_RS30170;product=IS21-like element ISBcen28 family helper ATPase IstB;protein_id=WP_012732871.1;transl_table=11 NZ_CP100139.1 RefSeq pseudogene 47248 47867 . - . ID=gene-NIV78_RS30175;Name=NIV78_RS30175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS30175;partial=true;pseudo=true;start_range=.,47248 NZ_CP100139.1 Protein Homology CDS 47248 47867 . - 0 ID=cds-NIV78_RS30175;Parent=gene-NIV78_RS30175;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611183.1;locus_tag=NIV78_RS30175;partial=true;product=IS5 family transposase;pseudo=true;start_range=.,47248;transl_table=11 NZ_CP100139.1 RefSeq gene 48733 48987 . + . ID=gene-NIV78_RS30180;Name=NIV78_RS30180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30180 NZ_CP100139.1 Protein Homology CDS 48733 48987 . + 0 ID=cds-WP_012734091.1;Parent=gene-NIV78_RS30180;Dbxref=Genbank:WP_012734091.1;Name=WP_012734091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734091.1;locus_tag=NIV78_RS30180;product=antitoxin;protein_id=WP_012734091.1;transl_table=11 NZ_CP100139.1 RefSeq gene 48978 49388 . + . ID=gene-NIV78_RS30185;Name=NIV78_RS30185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30185 NZ_CP100139.1 Protein Homology CDS 48978 49388 . + 0 ID=cds-WP_039203971.1;Parent=gene-NIV78_RS30185;Dbxref=Genbank:WP_039203971.1;Name=WP_039203971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734092.1;locus_tag=NIV78_RS30185;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_039203971.1;transl_table=11 NZ_CP100139.1 RefSeq gene 49451 49768 . + . ID=gene-NIV78_RS30190;Name=NIV78_RS30190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30190 NZ_CP100139.1 GeneMarkS-2+ CDS 49451 49768 . + 0 ID=cds-WP_017925051.1;Parent=gene-NIV78_RS30190;Dbxref=Genbank:WP_017925051.1;Name=WP_017925051.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS30190;product=hypothetical protein;protein_id=WP_017925051.1;transl_table=11 NZ_CP100139.1 RefSeq gene 49803 50183 . + . ID=gene-NIV78_RS30195;Name=NIV78_RS30195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30195 NZ_CP100139.1 Protein Homology CDS 49803 50183 . + 0 ID=cds-WP_257758141.1;Parent=gene-NIV78_RS30195;Dbxref=Genbank:WP_257758141.1;Name=WP_257758141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734093.1;locus_tag=NIV78_RS30195;product=hypothetical protein;protein_id=WP_257758141.1;transl_table=11 NZ_CP100139.1 RefSeq gene 50180 52003 . + . ID=gene-NIV78_RS30200;Name=NIV78_RS30200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30200 NZ_CP100139.1 Protein Homology CDS 50180 52003 . + 0 ID=cds-WP_039203972.1;Parent=gene-NIV78_RS30200;Dbxref=Genbank:WP_039203972.1;Name=WP_039203972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402546.1;locus_tag=NIV78_RS30200;product=site-specific integrase;protein_id=WP_039203972.1;transl_table=11 NZ_CP100139.1 RefSeq gene 52046 52255 . + . ID=gene-NIV78_RS30205;Name=NIV78_RS30205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30205 NZ_CP100139.1 Protein Homology CDS 52046 52255 . + 0 ID=cds-WP_017925019.1;Parent=gene-NIV78_RS30205;Dbxref=Genbank:WP_017925019.1;Name=WP_017925019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423524.1;locus_tag=NIV78_RS30205;product=hypothetical protein;protein_id=WP_017925019.1;transl_table=11 NZ_CP100139.1 RefSeq gene 52471 53154 . + . ID=gene-NIV78_RS30210;Name=NIV78_RS30210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30210 NZ_CP100139.1 Protein Homology CDS 52471 53154 . + 0 ID=cds-WP_124837551.1;Parent=gene-NIV78_RS30210;Dbxref=Genbank:WP_124837551.1;Name=WP_124837551.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732717.1;locus_tag=NIV78_RS30210;product=IS6 family transposase;protein_id=WP_124837551.1;transl_table=11 NZ_CP100139.1 RefSeq gene 53561 56068 . + . ID=gene-NIV78_RS30215;Name=NIV78_RS30215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30215 NZ_CP100139.1 Protein Homology CDS 53561 56068 . + 0 ID=cds-WP_039203083.1;Parent=gene-NIV78_RS30215;Dbxref=Genbank:WP_039203083.1;Name=WP_039203083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401578.1;locus_tag=NIV78_RS30215;product=type VI secretion system tip protein VgrG;protein_id=WP_039203083.1;transl_table=11 NZ_CP100139.1 RefSeq gene 56121 59024 . + . ID=gene-NIV78_RS30220;Name=NIV78_RS30220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30220 NZ_CP100139.1 Protein Homology CDS 56121 59024 . + 0 ID=cds-WP_171467053.1;Parent=gene-NIV78_RS30220;Dbxref=Genbank:WP_171467053.1;Name=WP_171467053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699816.1;locus_tag=NIV78_RS30220;product=hypothetical protein;protein_id=WP_171467053.1;transl_table=11 NZ_CP100139.1 RefSeq gene 59032 59568 . + . ID=gene-NIV78_RS30225;Name=NIV78_RS30225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30225 NZ_CP100139.1 Protein Homology CDS 59032 59568 . + 0 ID=cds-WP_017924909.1;Parent=gene-NIV78_RS30225;Dbxref=Genbank:WP_017924909.1;Name=WP_017924909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691781.1;locus_tag=NIV78_RS30225;product=hypothetical protein;protein_id=WP_017924909.1;transl_table=11 NZ_CP100139.1 RefSeq gene 59581 59820 . + . ID=gene-NIV78_RS30230;Name=NIV78_RS30230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30230 NZ_CP100139.1 Protein Homology CDS 59581 59820 . + 0 ID=cds-WP_257758144.1;Parent=gene-NIV78_RS30230;Dbxref=Genbank:WP_257758144.1;Name=WP_257758144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691782.1;locus_tag=NIV78_RS30230;product=PAAR domain-containing protein;protein_id=WP_257758144.1;transl_table=11 NZ_CP100139.1 RefSeq gene 59853 60581 . - . ID=gene-NIV78_RS30235;Name=NIV78_RS30235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30235 NZ_CP100139.1 Protein Homology CDS 59853 60581 . - 0 ID=cds-WP_252836676.1-2;Parent=gene-NIV78_RS30235;Dbxref=Genbank:WP_252836676.1;Name=WP_252836676.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732717.1;locus_tag=NIV78_RS30235;product=IS6 family transposase;protein_id=WP_252836676.1;transl_table=11 NZ_CP100139.1 RefSeq gene 61057 61320 . - . ID=gene-NIV78_RS30240;Name=NIV78_RS30240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30240 NZ_CP100139.1 Protein Homology CDS 61057 61320 . - 0 ID=cds-WP_017432678.1;Parent=gene-NIV78_RS30240;Dbxref=Genbank:WP_017432678.1;Name=WP_017432678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013700150.1;locus_tag=NIV78_RS30240;product=hypothetical protein;protein_id=WP_017432678.1;transl_table=11 NZ_CP100139.1 RefSeq gene 61329 61652 . - . ID=gene-NIV78_RS30245;Name=NIV78_RS30245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30245 NZ_CP100139.1 Protein Homology CDS 61329 61652 . - 0 ID=cds-WP_080630273.1;Parent=gene-NIV78_RS30245;Dbxref=Genbank:WP_080630273.1;Name=WP_080630273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699876.1;locus_tag=NIV78_RS30245;product=H-NS histone family protein;protein_id=WP_080630273.1;transl_table=11 NZ_CP100139.1 RefSeq pseudogene 61788 63152 . + . ID=gene-NIV78_RS30250;Name=NIV78_RS30250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS30250;partial=true;pseudo=true;start_range=.,61788 NZ_CP100139.1 Protein Homology CDS 61788 63152 . + 0 ID=cds-NIV78_RS30250;Parent=gene-NIV78_RS30250;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735330.1;locus_tag=NIV78_RS30250;partial=true;product=error-prone DNA polymerase;pseudo=true;start_range=.,61788;transl_table=11 NZ_CP100139.1 RefSeq gene 63289 64106 . - . ID=gene-NIV78_RS30255;Name=NIV78_RS30255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30255 NZ_CP100139.1 Protein Homology CDS 63758 64106 . - 0 ID=cds-WP_085962356.1-5;Parent=gene-NIV78_RS30255;Dbxref=Genbank:WP_085962356.1;Name=WP_085962356.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS30255;product=IS5 family transposase;protein_id=WP_085962356.1;transl_table=11 NZ_CP100139.1 Protein Homology CDS 63289 63758 . - 2 ID=cds-WP_085962356.1-5;Parent=gene-NIV78_RS30255;Dbxref=Genbank:WP_085962356.1;Name=WP_085962356.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS30255;product=IS5 family transposase;protein_id=WP_085962356.1;transl_table=11 NZ_CP100139.1 RefSeq gene 64501 65967 . + . ID=gene-NIV78_RS30260;Name=NIV78_RS30260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30260 NZ_CP100139.1 Protein Homology CDS 64501 65967 . + 0 ID=cds-WP_039203994.1;Parent=gene-NIV78_RS30260;Dbxref=Genbank:WP_039203994.1;Name=WP_039203994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007182758.1;locus_tag=NIV78_RS30260;product=ATP-binding domain-containing protein;protein_id=WP_039203994.1;transl_table=11 NZ_CP100139.1 RefSeq pseudogene 66025 66492 . + . ID=gene-NIV78_RS30265;Name=NIV78_RS30265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS30265;partial=true;pseudo=true;start_range=.,66025 NZ_CP100139.1 Protein Homology CDS 66025 66492 . + 0 ID=cds-NIV78_RS30265;Parent=gene-NIV78_RS30265;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611183.1;locus_tag=NIV78_RS30265;partial=true;product=IS5 family transposase;pseudo=true;start_range=.,66025;transl_table=11 NZ_CP100139.1 RefSeq gene 66499 68964 . - . ID=gene-NIV78_RS30270;Name=NIV78_RS30270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30270 NZ_CP100139.1 Protein Homology CDS 66499 68964 . - 0 ID=cds-WP_012732758.1;Parent=gene-NIV78_RS30270;Dbxref=Genbank:WP_012732758.1;Name=WP_012732758.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732758.1;locus_tag=NIV78_RS30270;product=alpha/beta hydrolase fold domain-containing protein;protein_id=WP_012732758.1;transl_table=11 NZ_CP100139.1 RefSeq gene 68951 70651 . - . ID=gene-NIV78_RS30275;Name=NIV78_RS30275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30275 NZ_CP100139.1 Protein Homology CDS 68951 70651 . - 0 ID=cds-WP_012732757.1;Parent=gene-NIV78_RS30275;Dbxref=Genbank:WP_012732757.1;Name=WP_012732757.1;Ontology_term=GO:0016614,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725969.1;locus_tag=NIV78_RS30275;product=GMC family oxidoreductase N-terminal domain-containing protein;protein_id=WP_012732757.1;transl_table=11 NZ_CP100139.1 RefSeq gene 70678 72099 . - . ID=gene-NIV78_RS30280;Name=NIV78_RS30280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30280 NZ_CP100139.1 Protein Homology CDS 70678 72099 . - 0 ID=cds-WP_012732756.1;Parent=gene-NIV78_RS30280;Dbxref=Genbank:WP_012732756.1;Name=WP_012732756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752123.1;locus_tag=NIV78_RS30280;product=coniferyl aldehyde dehydrogenase;protein_id=WP_012732756.1;transl_table=11 NZ_CP100139.1 RefSeq gene 72244 73296 . + . ID=gene-NIV78_RS30285;Name=NIV78_RS30285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30285 NZ_CP100139.1 Protein Homology CDS 72244 73296 . + 0 ID=cds-WP_012732755.1;Parent=gene-NIV78_RS30285;Dbxref=Genbank:WP_012732755.1;Name=WP_012732755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338661.1;locus_tag=NIV78_RS30285;product=AraC family transcriptional regulator ligand-binding domain-containing protein;protein_id=WP_012732755.1;transl_table=11 NZ_CP100139.1 RefSeq gene 73525 74001 . + . ID=gene-NIV78_RS30290;Name=NIV78_RS30290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30290 NZ_CP100139.1 Protein Homology CDS 73525 74001 . + 0 ID=cds-WP_039203908.1;Parent=gene-NIV78_RS30290;Dbxref=Genbank:WP_039203908.1;Name=WP_039203908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734051.1;locus_tag=NIV78_RS30290;product=transposase;protein_id=WP_039203908.1;transl_table=11 NZ_CP100139.1 RefSeq gene 73977 74327 . + . ID=gene-NIV78_RS30295;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=NIV78_RS30295 NZ_CP100139.1 Protein Homology CDS 73977 74327 . + 0 ID=cds-WP_012732753.1-7;Parent=gene-NIV78_RS30295;Dbxref=Genbank:WP_012732753.1;Name=WP_012732753.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: protein motif:HMM:NF017528.2;locus_tag=NIV78_RS30295;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_012732753.1;transl_table=11 NZ_CP100139.1 RefSeq gene 74359 75915 . + . ID=gene-NIV78_RS30300;Name=NIV78_RS30300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30300 NZ_CP100139.1 Protein Homology CDS 74359 75915 . + 0 ID=cds-WP_171467055.1;Parent=gene-NIV78_RS30300;Dbxref=Genbank:WP_171467055.1;Name=WP_171467055.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875269.1;locus_tag=NIV78_RS30300;product=IS66 family transposase;protein_id=WP_171467055.1;transl_table=11 NZ_CP100139.1 RefSeq pseudogene 75937 76131 . + . ID=gene-NIV78_RS30305;Name=NIV78_RS30305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS30305;partial=true;pseudo=true;start_range=.,75937 NZ_CP100139.1 Protein Homology CDS 75937 76131 . + 0 ID=cds-NIV78_RS30305;Parent=gene-NIV78_RS30305;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011002488.1;locus_tag=NIV78_RS30305;partial=true;product=transposase;pseudo=true;start_range=.,75937;transl_table=11 NZ_CP100139.1 RefSeq gene 76162 77820 . - . ID=gene-NIV78_RS30310;Name=NIV78_RS30310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30310 NZ_CP100139.1 Protein Homology CDS 76162 77820 . - 0 ID=cds-WP_051071153.1;Parent=gene-NIV78_RS30310;Dbxref=Genbank:WP_051071153.1;Name=WP_051071153.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017451389.1;locus_tag=NIV78_RS30310;product=CocE/NonD family hydrolase;protein_id=WP_051071153.1;transl_table=11 NZ_CP100139.1 RefSeq gene 78314 79231 . + . ID=gene-NIV78_RS30315;Name=NIV78_RS30315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30315 NZ_CP100139.1 Protein Homology CDS 78314 79231 . + 0 ID=cds-WP_017923352.1;Parent=gene-NIV78_RS30315;Dbxref=Genbank:WP_017923352.1;Name=WP_017923352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017451390.1;locus_tag=NIV78_RS30315;product=transporter;protein_id=WP_017923352.1;transl_table=11 NZ_CP100139.1 RefSeq pseudogene 79313 79871 . - . ID=gene-NIV78_RS30320;Name=NIV78_RS30320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS30320;pseudo=true NZ_CP100139.1 Protein Homology CDS 79313 79871 . - 0 ID=cds-NIV78_RS30320;Parent=gene-NIV78_RS30320;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012406703.1;locus_tag=NIV78_RS30320;product=plasmid pRiA4b ORF-3 family protein;pseudo=true;transl_table=11 NZ_CP100139.1 RefSeq pseudogene 79883 80122 . - . ID=gene-NIV78_RS30325;Name=NIV78_RS30325;end_range=80122,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS30325;partial=true;pseudo=true NZ_CP100139.1 Protein Homology CDS 79883 80122 . - 0 ID=cds-NIV78_RS30325;Parent=gene-NIV78_RS30325;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=80122,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880277.1;locus_tag=NIV78_RS30325;partial=true;product=transposase domain-containing protein;pseudo=true;transl_table=11 NZ_CP100139.1 RefSeq gene 80191 81057 . - . ID=gene-NIV78_RS30330;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=NIV78_RS30330 NZ_CP100139.1 Protein Homology CDS 80191 81057 . - 0 ID=cds-WP_012732871.1-9;Parent=gene-NIV78_RS30330;Dbxref=Genbank:WP_012732871.1;Name=WP_012732871.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476481.1;locus_tag=NIV78_RS30330;product=IS21-like element ISBcen28 family helper ATPase IstB;protein_id=WP_012732871.1;transl_table=11 NZ_CP100139.1 RefSeq gene 81054 82310 . - . ID=gene-NIV78_RS30335;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=NIV78_RS30335 NZ_CP100139.1 Protein Homology CDS 81054 82310 . - 0 ID=cds-WP_012734039.1-9;Parent=gene-NIV78_RS30335;Dbxref=Genbank:WP_012734039.1;Name=WP_012734039.1;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476480.1;locus_tag=NIV78_RS30335;product=IS21 family transposase;protein_id=WP_012734039.1;transl_table=11 NZ_CP100139.1 RefSeq pseudogene 82435 82626 . + . ID=gene-NIV78_RS30340;Name=NIV78_RS30340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS30340;partial=true;pseudo=true;start_range=.,82435 NZ_CP100139.1 Protein Homology CDS 82435 82626 . + 0 ID=cds-NIV78_RS30340;Parent=gene-NIV78_RS30340;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611183.1;locus_tag=NIV78_RS30340;partial=true;product=transposase;pseudo=true;start_range=.,82435;transl_table=11 NZ_CP100139.1 RefSeq gene 82773 83555 . - . ID=gene-NIV78_RS30345;Name=NIV78_RS30345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30345 NZ_CP100139.1 Protein Homology CDS 82773 83555 . - 0 ID=cds-WP_012734088.1;Parent=gene-NIV78_RS30345;Dbxref=Genbank:WP_012734088.1;Name=WP_012734088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014427210.1;locus_tag=NIV78_RS30345;product=helix-turn-helix transcriptional regulator;protein_id=WP_012734088.1;transl_table=11 NZ_CP100139.1 RefSeq gene 83658 84317 . + . ID=gene-NIV78_RS30350;Name=NIV78_RS30350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30350 NZ_CP100139.1 Protein Homology CDS 83658 84317 . + 0 ID=cds-WP_012734087.1;Parent=gene-NIV78_RS30350;Dbxref=Genbank:WP_012734087.1;Name=WP_012734087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014200080.1;locus_tag=NIV78_RS30350;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_012734087.1;transl_table=11 NZ_CP100139.1 RefSeq pseudogene 84453 85074 . + . ID=gene-NIV78_RS30355;Name=NIV78_RS30355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS30355;pseudo=true NZ_CP100139.1 Protein Homology CDS 84453 85074 . + 0 ID=cds-NIV78_RS30355;Parent=gene-NIV78_RS30355;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732717.1;locus_tag=NIV78_RS30355;product=DDE-type integrase/transposase/recombinase;pseudo=true;transl_table=11 NZ_CP100139.1 RefSeq gene 85379 86926 . + . ID=gene-NIV78_RS30360;Name=NIV78_RS30360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30360 NZ_CP100139.1 Protein Homology CDS 85379 86926 . + 0 ID=cds-WP_012734086.1;Parent=gene-NIV78_RS30360;Dbxref=Genbank:WP_012734086.1;Name=WP_012734086.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734086.1;locus_tag=NIV78_RS30360;product=methyl-accepting chemotaxis protein;protein_id=WP_012734086.1;transl_table=11 NZ_CP100139.1 RefSeq gene 87286 87786 . + . ID=gene-NIV78_RS30365;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=NIV78_RS30365 NZ_CP100139.1 Protein Homology CDS 87286 87786 . + 0 ID=cds-WP_012734085.1;Parent=gene-NIV78_RS30365;Dbxref=Genbank:WP_012734085.1;Name=WP_012734085.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006023997.1;locus_tag=NIV78_RS30365;product=flagellar basal body-associated protein FliL;protein_id=WP_012734085.1;transl_table=11 NZ_CP100139.1 RefSeq gene 87984 88271 . + . ID=gene-NIV78_RS30370;Name=NIV78_RS30370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30370 NZ_CP100139.1 Protein Homology CDS 87984 88271 . + 0 ID=cds-WP_017924497.1;Parent=gene-NIV78_RS30370;Dbxref=Genbank:WP_017924497.1;Name=WP_017924497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425513.1;locus_tag=NIV78_RS30370;product=hypothetical protein;protein_id=WP_017924497.1;transl_table=11 NZ_CP100139.1 RefSeq gene 88464 88754 . + . ID=gene-NIV78_RS30375;Name=NIV78_RS30375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30375 NZ_CP100139.1 Protein Homology CDS 88464 88754 . + 0 ID=cds-WP_230674603.1;Parent=gene-NIV78_RS30375;Dbxref=Genbank:WP_230674603.1;Name=WP_230674603.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024997.2;locus_tag=NIV78_RS30375;product=DDE-type integrase/transposase/recombinase;protein_id=WP_230674603.1;transl_table=11 NZ_CP100139.1 RefSeq gene 89013 89153 . - . ID=gene-NIV78_RS30380;Name=NIV78_RS30380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30380 NZ_CP100139.1 GeneMarkS-2+ CDS 89013 89153 . - 0 ID=cds-WP_080569432.1;Parent=gene-NIV78_RS30380;Dbxref=Genbank:WP_080569432.1;Name=WP_080569432.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS30380;product=integrase;protein_id=WP_080569432.1;transl_table=11 NZ_CP100139.1 RefSeq pseudogene 89216 89747 . - . ID=gene-NIV78_RS30385;Name=NIV78_RS30385;end_range=89747,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS30385;partial=true;pseudo=true NZ_CP100139.1 Protein Homology CDS 89216 89747 . - 0 ID=cds-NIV78_RS30385;Parent=gene-NIV78_RS30385;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=89747,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611281.1;locus_tag=NIV78_RS30385;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP100139.1 RefSeq pseudogene 89869 90048 . + . ID=gene-NIV78_RS30390;Name=NIV78_RS30390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS30390;partial=true;pseudo=true;start_range=.,89869 NZ_CP100139.1 Protein Homology CDS 89869 90048 . + 0 ID=cds-NIV78_RS30390;Parent=gene-NIV78_RS30390;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558218.1;locus_tag=NIV78_RS30390;partial=true;product=hypothetical protein;pseudo=true;start_range=.,89869;transl_table=11 NZ_CP100139.1 RefSeq gene 90023 90828 . - . ID=gene-NIV78_RS30395;Name=NIV78_RS30395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30395 NZ_CP100139.1 Protein Homology CDS 90498 90828 . - 0 ID=cds-WP_085962449.1;Parent=gene-NIV78_RS30395;Dbxref=Genbank:WP_085962449.1;Name=WP_085962449.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611183.1;locus_tag=NIV78_RS30395;product=IS5 family transposase;protein_id=WP_085962449.1;transl_table=11 NZ_CP100139.1 Protein Homology CDS 90023 90498 . - 2 ID=cds-WP_085962449.1;Parent=gene-NIV78_RS30395;Dbxref=Genbank:WP_085962449.1;Name=WP_085962449.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611183.1;locus_tag=NIV78_RS30395;product=IS5 family transposase;protein_id=WP_085962449.1;transl_table=11 NZ_CP100139.1 RefSeq gene 91007 92854 . - . ID=gene-NIV78_RS30400;Name=NIV78_RS30400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30400 NZ_CP100139.1 Protein Homology CDS 91007 92854 . - 0 ID=cds-WP_012734082.1;Parent=gene-NIV78_RS30400;Dbxref=Genbank:WP_012734082.1;Name=WP_012734082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877384.1;locus_tag=NIV78_RS30400;product=clostripain-related cysteine peptidase;protein_id=WP_012734082.1;transl_table=11 NZ_CP100139.1 RefSeq gene 92950 94437 . - . ID=gene-NIV78_RS30405;Name=NIV78_RS30405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30405 NZ_CP100139.1 GeneMarkS-2+ CDS 92950 94437 . - 0 ID=cds-WP_124837819.1;Parent=gene-NIV78_RS30405;Dbxref=Genbank:WP_124837819.1;Name=WP_124837819.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS30405;product=hypothetical protein;protein_id=WP_124837819.1;transl_table=11 NZ_CP100139.1 RefSeq pseudogene 95111 95914 . - . ID=gene-NIV78_RS30410;Name=NIV78_RS30410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS30410;pseudo=true NZ_CP100139.1 Protein Homology CDS 95111 95914 . - 0 ID=cds-NIV78_RS30410;Parent=gene-NIV78_RS30410;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013592781.1;locus_tag=NIV78_RS30410;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP100139.1 RefSeq gene 96129 96866 . + . ID=gene-NIV78_RS30415;Name=NIV78_RS30415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30415 NZ_CP100139.1 Protein Homology CDS 96129 96866 . + 0 ID=cds-WP_017423070.1;Parent=gene-NIV78_RS30415;Dbxref=Genbank:WP_017423070.1;Name=WP_017423070.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423070.1;locus_tag=NIV78_RS30415;product=response regulator;protein_id=WP_017423070.1;transl_table=11 NZ_CP100139.1 RefSeq gene 97086 97865 . + . ID=gene-NIV78_RS30420;Name=NIV78_RS30420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30420 NZ_CP100139.1 Protein Homology CDS 97086 97865 . + 0 ID=cds-WP_012734079.1;Parent=gene-NIV78_RS30420;Dbxref=Genbank:WP_012734079.1;Name=WP_012734079.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734079.1;locus_tag=NIV78_RS30420;product=response regulator;protein_id=WP_012734079.1;transl_table=11 NZ_CP100139.1 RefSeq gene 98015 100549 . + . ID=gene-NIV78_RS30425;Name=NIV78_RS30425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30425 NZ_CP100139.1 Protein Homology CDS 98015 100549 . + 0 ID=cds-WP_230674415.1;Parent=gene-NIV78_RS30425;Dbxref=Genbank:WP_230674415.1;Name=WP_230674415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734078.1;locus_tag=NIV78_RS30425;product=ATP-binding protein;protein_id=WP_230674415.1;transl_table=11 NZ_CP100139.1 RefSeq pseudogene 100581 100913 . - . ID=gene-NIV78_RS30430;Name=NIV78_RS30430;end_range=100913,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS30430;partial=true;pseudo=true NZ_CP100139.1 Protein Homology CDS 100581 100913 . - 0 ID=cds-NIV78_RS30430;Parent=gene-NIV78_RS30430;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=100913,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558218.1;locus_tag=NIV78_RS30430;partial=true;product=integrase core domain-containing protein;pseudo=true;transl_table=11 NZ_CP100139.1 RefSeq pseudogene 100940 101191 . - . ID=gene-NIV78_RS30435;Name=NIV78_RS30435;end_range=101191,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS30435;partial=true;pseudo=true NZ_CP100139.1 Protein Homology CDS 100940 101191 . - 0 ID=cds-NIV78_RS30435;Parent=gene-NIV78_RS30435;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=101191,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875269.1;locus_tag=NIV78_RS30435;partial=true;product=transposase domain-containing protein;pseudo=true;transl_table=11 NZ_CP100139.1 RefSeq gene 101275 101709 . + . ID=gene-NIV78_RS30440;Name=NIV78_RS30440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30440 NZ_CP100139.1 Protein Homology CDS 101275 101709 . + 0 ID=cds-WP_257758129.1;Parent=gene-NIV78_RS30440;Dbxref=Genbank:WP_257758129.1;Name=WP_257758129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734051.1;locus_tag=NIV78_RS30440;product=transposase;protein_id=WP_257758129.1;transl_table=11 NZ_CP100139.1 RefSeq gene 101719 103275 . - . ID=gene-NIV78_RS30445;Name=NIV78_RS30445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30445 NZ_CP100139.1 Protein Homology CDS 101719 103275 . - 0 ID=cds-WP_012732752.1-8;Parent=gene-NIV78_RS30445;Dbxref=Genbank:WP_012732752.1;Name=WP_012732752.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875269.1;locus_tag=NIV78_RS30445;product=IS66 family transposase;protein_id=WP_012732752.1;transl_table=11 NZ_CP100139.1 RefSeq gene 103307 103657 . - . ID=gene-NIV78_RS30450;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=NIV78_RS30450 NZ_CP100139.1 Protein Homology CDS 103307 103657 . - 0 ID=cds-WP_012732753.1-8;Parent=gene-NIV78_RS30450;Dbxref=Genbank:WP_012732753.1;Name=WP_012732753.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: protein motif:HMM:NF017528.2;locus_tag=NIV78_RS30450;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_012732753.1;transl_table=11 NZ_CP100139.1 RefSeq gene 103633 104109 . - . ID=gene-NIV78_RS30455;Name=NIV78_RS30455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30455 NZ_CP100139.1 Protein Homology CDS 103633 104109 . - 0 ID=cds-WP_039203908.1-2;Parent=gene-NIV78_RS30455;Dbxref=Genbank:WP_039203908.1;Name=WP_039203908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734051.1;locus_tag=NIV78_RS30455;product=transposase;protein_id=WP_039203908.1;transl_table=11 NZ_CP100139.1 RefSeq pseudogene 104199 104898 . - . ID=gene-NIV78_RS30460;Name=NIV78_RS30460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS30460;partial=true;pseudo=true;start_range=.,104199 NZ_CP100139.1 Protein Homology CDS 104199 104898 . - 0 ID=cds-NIV78_RS30460;Parent=gene-NIV78_RS30460;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611673.1;locus_tag=NIV78_RS30460;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,104199;transl_table=11 NZ_CP100139.1 cmsearch sequence_feature 104502 104618 . - . ID=id-NIV78_RS30460;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NIV78_RS30460;pseudo=true NZ_CP100139.1 RefSeq gene 104998 105729 . - . ID=gene-NIV78_RS30465;Name=NIV78_RS30465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30465 NZ_CP100139.1 Protein Homology CDS 104998 105729 . - 0 ID=cds-WP_232252309.1;Parent=gene-NIV78_RS30465;Dbxref=Genbank:WP_232252309.1;Name=WP_232252309.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF012245.2;locus_tag=NIV78_RS30465;product=methyl-accepting chemotaxis protein;protein_id=WP_232252309.1;transl_table=11 NZ_CP100139.1 RefSeq pseudogene 106228 106503 . - . ID=gene-NIV78_RS30470;Name=NIV78_RS30470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS30470;partial=true;pseudo=true;start_range=.,106228 NZ_CP100139.1 Protein Homology CDS 106228 106503 . - 0 ID=cds-NIV78_RS30470;Parent=gene-NIV78_RS30470;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020037.2;locus_tag=NIV78_RS30470;partial=true;product=PAS domain-containing protein;pseudo=true;start_range=.,106228;transl_table=11 NZ_CP100139.1 RefSeq pseudogene 107406 107787 . + . ID=gene-NIV78_RS30475;Name=NIV78_RS30475;end_range=107787,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS30475;partial=true;pseudo=true NZ_CP100139.1 Protein Homology CDS 107406 107787 . + 0 ID=cds-NIV78_RS30475;Parent=gene-NIV78_RS30475;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=107787,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004544985.1;locus_tag=NIV78_RS30475;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP100139.1 RefSeq gene 108114 108602 . - . ID=gene-NIV78_RS30480;Name=NIV78_RS30480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30480 NZ_CP100139.1 Protein Homology CDS 108114 108602 . - 0 ID=cds-WP_080569430.1;Parent=gene-NIV78_RS30480;Dbxref=Genbank:WP_080569430.1;Name=WP_080569430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699883.1;locus_tag=NIV78_RS30480;product=hypothetical protein;protein_id=WP_080569430.1;transl_table=11 NZ_CP100139.1 RefSeq gene 108821 110545 . - . ID=gene-NIV78_RS30485;Name=NIV78_RS30485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30485 NZ_CP100139.1 Protein Homology CDS 108821 110545 . - 0 ID=cds-WP_039204250.1;Parent=gene-NIV78_RS30485;Dbxref=Genbank:WP_039204250.1;Name=WP_039204250.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734074.1;locus_tag=NIV78_RS30485;product=methyl-accepting chemotaxis protein;protein_id=WP_039204250.1;transl_table=11 NZ_CP100139.1 RefSeq gene 110721 112418 . - . ID=gene-NIV78_RS30490;Name=NIV78_RS30490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30490 NZ_CP100139.1 Protein Homology CDS 110721 112418 . - 0 ID=cds-WP_012732723.1;Parent=gene-NIV78_RS30490;Dbxref=Genbank:WP_012732723.1;Name=WP_012732723.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732723.1;locus_tag=NIV78_RS30490;product=methyl-accepting chemotaxis protein;protein_id=WP_012732723.1;transl_table=11 NZ_CP100139.1 RefSeq gene 112458 112802 . - . ID=gene-NIV78_RS30495;Name=NIV78_RS30495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30495 NZ_CP100139.1 GeneMarkS-2+ CDS 112458 112802 . - 0 ID=cds-WP_017432531.1;Parent=gene-NIV78_RS30495;Dbxref=Genbank:WP_017432531.1;Name=WP_017432531.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS30495;product=hypothetical protein;protein_id=WP_017432531.1;transl_table=11 NZ_CP100139.1 RefSeq gene 113285 114868 . + . ID=gene-NIV78_RS30500;Name=NIV78_RS30500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30500 NZ_CP100139.1 Protein Homology CDS 113285 114868 . + 0 ID=cds-WP_012732724.1;Parent=gene-NIV78_RS30500;Dbxref=Genbank:WP_012732724.1;Name=WP_012732724.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732724.1;locus_tag=NIV78_RS30500;product=methyl-accepting chemotaxis protein;protein_id=WP_012732724.1;transl_table=11 NZ_CP100139.1 RefSeq pseudogene 114992 116090 . - . ID=gene-NIV78_RS30505;Name=NIV78_RS30505;end_range=116090,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS30505;partial=true;pseudo=true NZ_CP100139.1 Protein Homology CDS 114992 116090 . - 0 ID=cds-NIV78_RS30505;Parent=gene-NIV78_RS30505;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=116090,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013700073.1;locus_tag=NIV78_RS30505;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_CP100139.1 RefSeq gene 116386 116982 . - . ID=gene-NIV78_RS30510;Name=NIV78_RS30510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30510 NZ_CP100139.1 Protein Homology CDS 116386 116982 . - 0 ID=cds-WP_236577948.1;Parent=gene-NIV78_RS30510;Dbxref=Genbank:WP_236577948.1;Name=WP_236577948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734073.1;locus_tag=NIV78_RS30510;product=HD-GYP domain-containing protein;protein_id=WP_236577948.1;transl_table=11 NZ_CP100139.1 RefSeq gene 117282 118099 . - . ID=gene-NIV78_RS30515;Name=NIV78_RS30515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30515 NZ_CP100139.1 Protein Homology CDS 117751 118099 . - 0 ID=cds-WP_257758132.1;Parent=gene-NIV78_RS30515;Dbxref=Genbank:WP_257758132.1;Name=WP_257758132.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS30515;product=IS5 family transposase;protein_id=WP_257758132.1;transl_table=11 NZ_CP100139.1 Protein Homology CDS 117282 117751 . - 2 ID=cds-WP_257758132.1;Parent=gene-NIV78_RS30515;Dbxref=Genbank:WP_257758132.1;Name=WP_257758132.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS30515;product=IS5 family transposase;protein_id=WP_257758132.1;transl_table=11 NZ_CP100139.1 RefSeq gene 118302 119321 . + . ID=gene-NIV78_RS30520;Name=NIV78_RS30520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30520 NZ_CP100139.1 Protein Homology CDS 118302 119321 . + 0 ID=cds-WP_045678676.1;Parent=gene-NIV78_RS30520;Dbxref=Genbank:WP_045678676.1;Name=WP_045678676.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492245.1;locus_tag=NIV78_RS30520;product=IS110 family transposase;protein_id=WP_045678676.1;transl_table=11 NZ_CP100139.1 RefSeq gene 119680 120975 . - . ID=gene-NIV78_RS30525;Name=NIV78_RS30525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30525 NZ_CP100139.1 Protein Homology CDS 119680 120975 . - 0 ID=cds-WP_012734070.1;Parent=gene-NIV78_RS30525;Dbxref=Genbank:WP_012734070.1;Name=WP_012734070.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734070.1;locus_tag=NIV78_RS30525;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_012734070.1;transl_table=11 NZ_CP100139.1 RefSeq pseudogene 121125 121391 . + . ID=gene-NIV78_RS30530;Name=NIV78_RS30530;end_range=121391,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS30530;partial=true;pseudo=true NZ_CP100139.1 Protein Homology CDS 121125 121391 . + 0 ID=cds-NIV78_RS30530;Parent=gene-NIV78_RS30530;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=121391,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013105981.1;locus_tag=NIV78_RS30530;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP100139.1 RefSeq gene 121507 122322 . - . ID=gene-NIV78_RS30535;Name=NIV78_RS30535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30535 NZ_CP100139.1 Protein Homology CDS 121507 122322 . - 0 ID=cds-WP_035976812.1;Parent=gene-NIV78_RS30535;Dbxref=Genbank:WP_035976812.1;Name=WP_035976812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689975.1;locus_tag=NIV78_RS30535;product=sulfotransferase;protein_id=WP_035976812.1;transl_table=11 NZ_CP100139.1 RefSeq gene 122395 123078 . - . ID=gene-NIV78_RS30540;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=NIV78_RS30540 NZ_CP100139.1 Protein Homology CDS 122395 123078 . - 0 ID=cds-WP_012734068.1;Parent=gene-NIV78_RS30540;Dbxref=Genbank:WP_012734068.1;Name=WP_012734068.1;Ontology_term=GO:0006790,GO:0004020;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734068.1;locus_tag=NIV78_RS30540;product=adenylyl-sulfate kinase;protein_id=WP_012734068.1;transl_table=11 NZ_CP100139.1 RefSeq gene 124075 125628 . + . ID=gene-NIV78_RS30545;Name=NIV78_RS30545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30545 NZ_CP100139.1 Protein Homology CDS 124075 125628 . + 0 ID=cds-WP_245163844.1;Parent=gene-NIV78_RS30545;Dbxref=Genbank:WP_245163844.1;Name=WP_245163844.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=NIV78_RS30545;product=tyrosine-type recombinase/integrase;protein_id=WP_245163844.1;transl_table=11 NZ_CP100139.1 RefSeq gene 125668 125958 . + . ID=gene-NIV78_RS30550;Name=NIV78_RS30550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30550 NZ_CP100139.1 Protein Homology CDS 125668 125958 . + 0 ID=cds-WP_017425259.1;Parent=gene-NIV78_RS30550;Dbxref=Genbank:WP_017425259.1;Name=WP_017425259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425259.1;locus_tag=NIV78_RS30550;product=hypothetical protein;protein_id=WP_017425259.1;transl_table=11 NZ_CP100139.1 RefSeq gene 126083 126754 . + . ID=gene-NIV78_RS30555;Name=NIV78_RS30555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30555 NZ_CP100139.1 Protein Homology CDS 126083 126754 . + 0 ID=cds-WP_012734065.1;Parent=gene-NIV78_RS30555;Dbxref=Genbank:WP_012734065.1;Name=WP_012734065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013094685.1;locus_tag=NIV78_RS30555;product=site-specific integrase;protein_id=WP_012734065.1;transl_table=11 NZ_CP100139.1 RefSeq gene 126866 127114 . + . ID=gene-NIV78_RS30560;Name=NIV78_RS30560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30560 NZ_CP100139.1 Protein Homology CDS 126866 127114 . + 0 ID=cds-WP_012734064.1;Parent=gene-NIV78_RS30560;Dbxref=Genbank:WP_012734064.1;Name=WP_012734064.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006053174.1;locus_tag=NIV78_RS30560;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=WP_012734064.1;transl_table=11 NZ_CP100139.1 RefSeq gene 127108 127428 . + . ID=gene-NIV78_RS30565;Name=NIV78_RS30565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30565 NZ_CP100139.1 Protein Homology CDS 127108 127428 . + 0 ID=cds-WP_012734063.1;Parent=gene-NIV78_RS30565;Dbxref=Genbank:WP_012734063.1;Name=WP_012734063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879712.1;locus_tag=NIV78_RS30565;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_012734063.1;transl_table=11 NZ_CP100139.1 RefSeq gene 127440 127703 . + . ID=gene-NIV78_RS30570;Name=NIV78_RS30570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30570 NZ_CP100139.1 GeneMarkS-2+ CDS 127440 127703 . + 0 ID=cds-WP_017433216.1;Parent=gene-NIV78_RS30570;Dbxref=Genbank:WP_017433216.1;Name=WP_017433216.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS30570;product=hypothetical protein;protein_id=WP_017433216.1;transl_table=11 NZ_CP100139.1 RefSeq gene 127716 127958 . + . ID=gene-NIV78_RS30575;Name=NIV78_RS30575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30575 NZ_CP100139.1 Protein Homology CDS 127716 127958 . + 0 ID=cds-WP_012734062.1-2;Parent=gene-NIV78_RS30575;Dbxref=Genbank:WP_012734062.1;Name=WP_012734062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734062.1;locus_tag=NIV78_RS30575;product=hypothetical protein;protein_id=WP_012734062.1;transl_table=11 NZ_CP100139.1 RefSeq gene 128022 128324 . + . ID=gene-NIV78_RS30580;Name=NIV78_RS30580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30580 NZ_CP100139.1 GeneMarkS-2+ CDS 128022 128324 . + 0 ID=cds-WP_124837730.1;Parent=gene-NIV78_RS30580;Dbxref=Genbank:WP_124837730.1;Name=WP_124837730.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS30580;product=hypothetical protein;protein_id=WP_124837730.1;transl_table=11 NZ_CP100139.1 RefSeq gene 128394 128588 . + . ID=gene-NIV78_RS30585;Name=NIV78_RS30585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30585 NZ_CP100139.1 GeneMarkS-2+ CDS 128394 128588 . + 0 ID=cds-WP_124837731.1;Parent=gene-NIV78_RS30585;Dbxref=Genbank:WP_124837731.1;Name=WP_124837731.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS30585;product=hypothetical protein;protein_id=WP_124837731.1;transl_table=11 NZ_CP100139.1 RefSeq gene 128673 129490 . - . ID=gene-NIV78_RS30590;Name=NIV78_RS30590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30590 NZ_CP100139.1 Protein Homology CDS 129142 129490 . - 0 ID=cds-WP_085962451.1-7;Parent=gene-NIV78_RS30590;Dbxref=Genbank:WP_085962451.1;Name=WP_085962451.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS30590;product=IS5 family transposase;protein_id=WP_085962451.1;transl_table=11 NZ_CP100139.1 Protein Homology CDS 128673 129142 . - 2 ID=cds-WP_085962451.1-7;Parent=gene-NIV78_RS30590;Dbxref=Genbank:WP_085962451.1;Name=WP_085962451.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS30590;product=IS5 family transposase;protein_id=WP_085962451.1;transl_table=11 NZ_CP100139.1 RefSeq gene 129593 130390 . - . ID=gene-NIV78_RS30595;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=NIV78_RS30595 NZ_CP100139.1 Protein Homology CDS 129593 130390 . - 0 ID=cds-WP_012732720.1-8;Parent=gene-NIV78_RS30595;Dbxref=Genbank:WP_012732720.1;Name=WP_012732720.1;Ontology_term=GO:0005524;gbkey=CDS;gene=istB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013700154.1;locus_tag=NIV78_RS30595;product=IS21-like element helper ATPase IstB;protein_id=WP_012732720.1;transl_table=11 NZ_CP100139.1 RefSeq pseudogene 130383 130679 . - . ID=gene-NIV78_RS30600;Name=NIV78_RS30600;end_range=130679,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS30600;partial=true;pseudo=true NZ_CP100139.1 Protein Homology CDS 130383 130679 . - 0 ID=cds-NIV78_RS30600;Parent=gene-NIV78_RS30600;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=130679,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612028.1;locus_tag=NIV78_RS30600;partial=true;product=IS21 family transposase;pseudo=true;transl_table=11 NZ_CP100139.1 RefSeq gene 130706 132262 . - . ID=gene-NIV78_RS30605;Name=NIV78_RS30605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30605 NZ_CP100139.1 Protein Homology CDS 130706 132262 . - 0 ID=cds-WP_012732752.1-9;Parent=gene-NIV78_RS30605;Dbxref=Genbank:WP_012732752.1;Name=WP_012732752.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875269.1;locus_tag=NIV78_RS30605;product=IS66 family transposase;protein_id=WP_012732752.1;transl_table=11 NZ_CP100139.1 RefSeq gene 132294 132644 . - . ID=gene-NIV78_RS30610;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=NIV78_RS30610 NZ_CP100139.1 Protein Homology CDS 132294 132644 . - 0 ID=cds-WP_012732753.1-9;Parent=gene-NIV78_RS30610;Dbxref=Genbank:WP_012732753.1;Name=WP_012732753.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: protein motif:HMM:NF017528.2;locus_tag=NIV78_RS30610;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_012732753.1;transl_table=11 NZ_CP100139.1 RefSeq gene 132620 133096 . - . ID=gene-NIV78_RS30615;Name=NIV78_RS30615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30615 NZ_CP100139.1 Protein Homology CDS 132620 133096 . - 0 ID=cds-WP_012734051.1-7;Parent=gene-NIV78_RS30615;Dbxref=Genbank:WP_012734051.1;Name=WP_012734051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699891.1;locus_tag=NIV78_RS30615;product=transposase;protein_id=WP_012734051.1;transl_table=11 NZ_CP100139.1 RefSeq pseudogene 133186 133602 . - . ID=gene-NIV78_RS30620;Name=NIV78_RS30620;end_range=133602,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS30620;partial=true;pseudo=true;start_range=.,133186 NZ_CP100139.1 Protein Homology CDS 133186 133602 . - 0 ID=cds-NIV78_RS30620;Parent=gene-NIV78_RS30620;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=133602,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612028.1;locus_tag=NIV78_RS30620;partial=true;product=IS21 family transposase;pseudo=true;start_range=.,133186;transl_table=11 NZ_CP100139.1 RefSeq gene 133611 134428 . - . ID=gene-NIV78_RS30625;Name=NIV78_RS30625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30625 NZ_CP100139.1 Protein Homology CDS 134080 134428 . - 0 ID=cds-WP_257757507.1-6;Parent=gene-NIV78_RS30625;Dbxref=Genbank:WP_257757507.1;Name=WP_257757507.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS30625;product=IS5 family transposase;protein_id=WP_257757507.1;transl_table=11 NZ_CP100139.1 Protein Homology CDS 133611 134080 . - 2 ID=cds-WP_257757507.1-6;Parent=gene-NIV78_RS30625;Dbxref=Genbank:WP_257757507.1;Name=WP_257757507.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611266.1;locus_tag=NIV78_RS30625;product=IS5 family transposase;protein_id=WP_257757507.1;transl_table=11 NZ_CP100139.1 RefSeq pseudogene 134517 135317 . - . ID=gene-NIV78_RS30630;Name=istA;gbkey=Gene;gene=istA;gene_biotype=pseudogene;locus_tag=NIV78_RS30630;partial=true;pseudo=true;start_range=.,134517 NZ_CP100139.1 Protein Homology CDS 134517 135317 . - 0 ID=cds-NIV78_RS30630;Parent=gene-NIV78_RS30630;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546517.1;locus_tag=NIV78_RS30630;partial=true;product=IS21 family transposase;pseudo=true;start_range=.,134517;transl_table=11 NZ_CP100139.1 RefSeq pseudogene 135408 135659 . + . ID=gene-NIV78_RS30635;Name=NIV78_RS30635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS30635;partial=true;pseudo=true;start_range=.,135408 NZ_CP100139.1 Protein Homology CDS 135408 135659 . + 0 ID=cds-NIV78_RS30635;Parent=gene-NIV78_RS30635;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611479.1;locus_tag=NIV78_RS30635;partial=true;product=integrase core domain-containing protein;pseudo=true;start_range=.,135408;transl_table=11 NZ_CP100139.1 RefSeq gene 135688 136833 . - . ID=gene-NIV78_RS30640;Name=NIV78_RS30640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30640 NZ_CP100139.1 Protein Homology CDS 135688 136833 . - 0 ID=cds-WP_017923366.1;Parent=gene-NIV78_RS30640;Dbxref=Genbank:WP_017923366.1;Name=WP_017923366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898439.1;locus_tag=NIV78_RS30640;product=DUF2827 domain-containing protein;protein_id=WP_017923366.1;transl_table=11 NZ_CP100139.1 RefSeq gene 136848 137957 . - . ID=gene-NIV78_RS30645;Name=NIV78_RS30645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30645 NZ_CP100139.1 Protein Homology CDS 136848 137957 . - 0 ID=cds-WP_017923365.1;Parent=gene-NIV78_RS30645;Dbxref=Genbank:WP_017923365.1;Name=WP_017923365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216418.1;locus_tag=NIV78_RS30645;product=DUF2827 domain-containing protein;protein_id=WP_017923365.1;transl_table=11 NZ_CP100139.1 RefSeq gene 138387 138752 . - . ID=gene-NIV78_RS30650;Name=NIV78_RS30650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30650 NZ_CP100139.1 Protein Homology CDS 138387 138752 . - 0 ID=cds-WP_244102839.1;Parent=gene-NIV78_RS30650;Dbxref=Genbank:WP_244102839.1;Name=WP_244102839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367269.1;locus_tag=NIV78_RS30650;product=H-NS histone family protein;protein_id=WP_244102839.1;transl_table=11 NZ_CP100139.1 RefSeq gene 139068 140306 . - . ID=gene-NIV78_RS30655;Name=NIV78_RS30655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30655 NZ_CP100139.1 Protein Homology CDS 139068 140306 . - 0 ID=cds-WP_017923362.1;Parent=gene-NIV78_RS30655;Dbxref=Genbank:WP_017923362.1;Name=WP_017923362.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024824.2;locus_tag=NIV78_RS30655;product=tetratricopeptide repeat protein;protein_id=WP_017923362.1;transl_table=11 NZ_CP100139.1 RefSeq gene 140729 145117 . - . ID=gene-NIV78_RS30660;Name=NIV78_RS30660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30660 NZ_CP100139.1 Protein Homology CDS 140729 145117 . - 0 ID=cds-WP_257758145.1;Parent=gene-NIV78_RS30660;Dbxref=Genbank:WP_257758145.1;Name=WP_257758145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004528740.1;locus_tag=NIV78_RS30660;product=YadA-like family protein;protein_id=WP_257758145.1;transl_table=11 NZ_CP100139.1 RefSeq gene 145363 146082 . - . ID=gene-NIV78_RS30665;Name=NIV78_RS30665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30665 NZ_CP100139.1 Protein Homology CDS 145363 146082 . - 0 ID=cds-WP_080630261.1;Parent=gene-NIV78_RS30665;Dbxref=Genbank:WP_080630261.1;Name=WP_080630261.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012698.2;locus_tag=NIV78_RS30665;product=response regulator transcription factor;protein_id=WP_080630261.1;transl_table=11 NZ_CP100139.1 RefSeq gene 147275 148162 . + . ID=gene-NIV78_RS30670;Name=NIV78_RS30670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30670 NZ_CP100139.1 Protein Homology CDS 147275 148162 . + 0 ID=cds-WP_039202686.1;Parent=gene-NIV78_RS30670;Dbxref=Genbank:WP_039202686.1;Name=WP_039202686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009896560.1;locus_tag=NIV78_RS30670;product=alpha/beta hydrolase;protein_id=WP_039202686.1;transl_table=11 NZ_CP100139.1 RefSeq gene 148309 149667 . + . ID=gene-NIV78_RS30675;Name=NIV78_RS30675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30675 NZ_CP100139.1 Protein Homology CDS 148309 149667 . + 0 ID=cds-WP_039202683.1;Parent=gene-NIV78_RS30675;Dbxref=Genbank:WP_039202683.1;Name=WP_039202683.1;Ontology_term=GO:0005975,GO:0030259,GO:0016758;gbkey=CDS;go_function=hexosyltransferase activity|0016758||IEA;go_process=carbohydrate metabolic process|0005975||IEA,lipid glycosylation|0030259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689524.1;locus_tag=NIV78_RS30675;product=glycosyltransferase;protein_id=WP_039202683.1;transl_table=11 NZ_CP100139.1 RefSeq gene 149790 151304 . + . ID=gene-NIV78_RS30680;Name=NIV78_RS30680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30680 NZ_CP100139.1 Protein Homology CDS 149790 151304 . + 0 ID=cds-WP_063778003.1;Parent=gene-NIV78_RS30680;Dbxref=Genbank:WP_063778003.1;Name=WP_063778003.1;Ontology_term=GO:0006855,GO:0009410,GO:0005887;gbkey=CDS;go_component=integral component of plasma membrane|0005887||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA,response to xenobiotic stimulus|0009410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493996.1;locus_tag=NIV78_RS30680;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_063778003.1;transl_table=11 NZ_CP100139.1 RefSeq gene 151362 152300 . + . ID=gene-NIV78_RS30685;Name=NIV78_RS30685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30685 NZ_CP100139.1 Protein Homology CDS 151362 152300 . + 0 ID=cds-WP_017924488.1;Parent=gene-NIV78_RS30685;Dbxref=Genbank:WP_017924488.1;Name=WP_017924488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689526.1;locus_tag=NIV78_RS30685;product=glycosyltransferase family 2 protein;protein_id=WP_017924488.1;transl_table=11 NZ_CP100139.1 RefSeq gene 152297 153853 . + . ID=gene-NIV78_RS30690;Name=NIV78_RS30690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30690 NZ_CP100139.1 Protein Homology CDS 152297 153853 . + 0 ID=cds-WP_039202682.1;Parent=gene-NIV78_RS30690;Dbxref=Genbank:WP_039202682.1;Name=WP_039202682.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689527.1;locus_tag=NIV78_RS30690;product=efflux transporter outer membrane subunit;protein_id=WP_039202682.1;transl_table=11 NZ_CP100139.1 RefSeq gene 153858 155051 . + . ID=gene-NIV78_RS30695;Name=NIV78_RS30695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30695 NZ_CP100139.1 Protein Homology CDS 153858 155051 . + 0 ID=cds-WP_017923420.1;Parent=gene-NIV78_RS30695;Dbxref=Genbank:WP_017923420.1;Name=WP_017923420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689528.1;locus_tag=NIV78_RS30695;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WP_017923420.1;transl_table=11 NZ_CP100139.1 RefSeq pseudogene 156234 156551 . - . ID=gene-NIV78_RS30700;Name=NIV78_RS30700;end_range=156551,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS30700;partial=true;pseudo=true NZ_CP100139.1 Protein Homology CDS 156234 156551 . - 0 ID=cds-NIV78_RS30700;Parent=gene-NIV78_RS30700;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=156551,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558218.1;locus_tag=NIV78_RS30700;partial=true;product=integrase core domain-containing protein;pseudo=true;transl_table=11 NZ_CP100139.1 RefSeq gene 156733 157209 . + . ID=gene-NIV78_RS30705;Name=NIV78_RS30705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30705 NZ_CP100139.1 Protein Homology CDS 156733 157209 . + 0 ID=cds-WP_012734051.1-8;Parent=gene-NIV78_RS30705;Dbxref=Genbank:WP_012734051.1;Name=WP_012734051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699891.1;locus_tag=NIV78_RS30705;product=transposase;protein_id=WP_012734051.1;transl_table=11 NZ_CP100139.1 RefSeq gene 157185 157535 . + . ID=gene-NIV78_RS30710;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=NIV78_RS30710 NZ_CP100139.1 Protein Homology CDS 157185 157535 . + 0 ID=cds-WP_012732753.1-10;Parent=gene-NIV78_RS30710;Dbxref=Genbank:WP_012732753.1;Name=WP_012732753.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: protein motif:HMM:NF017528.2;locus_tag=NIV78_RS30710;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_012732753.1;transl_table=11 NZ_CP100139.1 RefSeq gene 157567 159123 . + . ID=gene-NIV78_RS30715;Name=NIV78_RS30715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30715 NZ_CP100139.1 Protein Homology CDS 157567 159123 . + 0 ID=cds-WP_012732752.1-10;Parent=gene-NIV78_RS30715;Dbxref=Genbank:WP_012732752.1;Name=WP_012732752.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875269.1;locus_tag=NIV78_RS30715;product=IS66 family transposase;protein_id=WP_012732752.1;transl_table=11 NZ_CP100139.1 RefSeq pseudogene 159045 159383 . + . ID=gene-NIV78_RS30720;Name=NIV78_RS30720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NIV78_RS30720;partial=true;pseudo=true;start_range=.,159045 NZ_CP100139.1 Protein Homology CDS 159045 159383 . + 0 ID=cds-NIV78_RS30720;Parent=gene-NIV78_RS30720;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732717.1;locus_tag=NIV78_RS30720;partial=true;product=hypothetical protein;pseudo=true;start_range=.,159045;transl_table=11 NZ_CP100139.1 RefSeq gene 159600 160328 . + . ID=gene-NIV78_RS30725;Name=NIV78_RS30725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30725 NZ_CP100139.1 Protein Homology CDS 159600 160328 . + 0 ID=cds-WP_252836676.1-3;Parent=gene-NIV78_RS30725;Dbxref=Genbank:WP_252836676.1;Name=WP_252836676.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732717.1;locus_tag=NIV78_RS30725;product=IS6 family transposase;protein_id=WP_252836676.1;transl_table=11 NZ_CP100139.1 RefSeq gene 160369 160614 . - . ID=gene-NIV78_RS30730;Name=NIV78_RS30730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30730 NZ_CP100139.1 Protein Homology CDS 160369 160614 . - 0 ID=cds-WP_171467079.1;Parent=gene-NIV78_RS30730;Dbxref=Genbank:WP_171467079.1;Name=WP_171467079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734062.1;locus_tag=NIV78_RS30730;product=hypothetical protein;protein_id=WP_171467079.1;transl_table=11 NZ_CP100139.1 RefSeq gene 160632 161195 . - . ID=gene-NIV78_RS30735;Name=NIV78_RS30735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30735 NZ_CP100139.1 GeneMarkS-2+ CDS 160632 161195 . - 0 ID=cds-WP_012735346.1;Parent=gene-NIV78_RS30735;Dbxref=Genbank:WP_012735346.1;Name=WP_012735346.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS30735;product=hypothetical protein;protein_id=WP_012735346.1;transl_table=11 NZ_CP100139.1 RefSeq gene 161210 161611 . - . ID=gene-NIV78_RS30740;Name=NIV78_RS30740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30740 NZ_CP100139.1 Protein Homology CDS 161210 161611 . - 0 ID=cds-WP_012735347.1;Parent=gene-NIV78_RS30740;Dbxref=Genbank:WP_012735347.1;Name=WP_012735347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754107.1;locus_tag=NIV78_RS30740;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_012735347.1;transl_table=11 NZ_CP100139.1 RefSeq gene 161611 161847 . - . ID=gene-NIV78_RS30745;Name=vapB;gbkey=Gene;gene=vapB;gene_biotype=protein_coding;locus_tag=NIV78_RS30745 NZ_CP100139.1 Protein Homology CDS 161611 161847 . - 0 ID=cds-WP_017924531.1;Parent=gene-NIV78_RS30745;Dbxref=Genbank:WP_017924531.1;Name=WP_017924531.1;gbkey=CDS;gene=vapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759705.1;locus_tag=NIV78_RS30745;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_017924531.1;transl_table=11 NZ_CP100139.1 RefSeq gene 162279 163988 . - . ID=gene-NIV78_RS30750;Name=NIV78_RS30750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30750 NZ_CP100139.1 Protein Homology CDS 162279 163988 . - 0 ID=cds-WP_153479184.1;Parent=gene-NIV78_RS30750;Dbxref=Genbank:WP_153479184.1;Name=WP_153479184.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733754.1;locus_tag=NIV78_RS30750;product=methyl-accepting chemotaxis protein;protein_id=WP_153479184.1;transl_table=11 NZ_CP100139.1 RefSeq gene 164202 164609 . - . ID=gene-NIV78_RS30755;Name=NIV78_RS30755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30755 NZ_CP100139.1 Protein Homology CDS 164202 164609 . - 0 ID=cds-WP_230674553.1;Parent=gene-NIV78_RS30755;Dbxref=Genbank:WP_230674553.1;Name=WP_230674553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425516.1;locus_tag=NIV78_RS30755;product=hypothetical protein;protein_id=WP_230674553.1;transl_table=11 NZ_CP100139.1 RefSeq gene 164712 166547 . - . ID=gene-NIV78_RS30760;Name=NIV78_RS30760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30760 NZ_CP100139.1 Protein Homology CDS 164712 166547 . - 0 ID=cds-WP_257758146.1;Parent=gene-NIV78_RS30760;Dbxref=Genbank:WP_257758146.1;Name=WP_257758146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013700073.1;locus_tag=NIV78_RS30760;product=site-specific integrase;protein_id=WP_257758146.1;transl_table=11 NZ_CP100139.1 RefSeq gene 166550 166891 . - . ID=gene-NIV78_RS30765;Name=NIV78_RS30765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30765 NZ_CP100139.1 Protein Homology CDS 166550 166891 . - 0 ID=cds-WP_257758096.1-2;Parent=gene-NIV78_RS30765;Dbxref=Genbank:WP_257758096.1;Name=WP_257758096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732710.1;locus_tag=NIV78_RS30765;product=hypothetical protein;protein_id=WP_257758096.1;transl_table=11 NZ_CP100139.1 RefSeq gene 166948 167193 . - . ID=gene-NIV78_RS30770;Name=NIV78_RS30770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30770 NZ_CP100139.1 GeneMarkS-2+ CDS 166948 167193 . - 0 ID=cds-WP_127913916.1-2;Parent=gene-NIV78_RS30770;Dbxref=Genbank:WP_127913916.1;Name=WP_127913916.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS30770;product=hypothetical protein;protein_id=WP_127913916.1;transl_table=11 NZ_CP100139.1 RefSeq gene 167190 167432 . - . ID=gene-NIV78_RS30775;Name=NIV78_RS30775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30775 NZ_CP100139.1 GeneMarkS-2+ CDS 167190 167432 . - 0 ID=cds-WP_124837682.1;Parent=gene-NIV78_RS30775;Dbxref=Genbank:WP_124837682.1;Name=WP_124837682.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS30775;product=hypothetical protein;protein_id=WP_124837682.1;transl_table=11 NZ_CP100139.1 RefSeq gene 167446 167730 . - . ID=gene-NIV78_RS30780;Name=NIV78_RS30780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30780 NZ_CP100139.1 GeneMarkS-2+ CDS 167446 167730 . - 0 ID=cds-WP_017432347.1-2;Parent=gene-NIV78_RS30780;Dbxref=Genbank:WP_017432347.1;Name=WP_017432347.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS30780;product=hypothetical protein;protein_id=WP_017432347.1;transl_table=11 NZ_CP100139.1 RefSeq gene 168137 168625 . - . ID=gene-NIV78_RS30785;Name=NIV78_RS30785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30785 NZ_CP100139.1 Protein Homology CDS 168137 168625 . - 0 ID=cds-WP_012732893.1;Parent=gene-NIV78_RS30785;Dbxref=Genbank:WP_012732893.1;Name=WP_012732893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732893.1;locus_tag=NIV78_RS30785;product=GNAT family N-acetyltransferase;protein_id=WP_012732893.1;transl_table=11 NZ_CP100139.1 RefSeq gene 168622 168891 . - . ID=gene-NIV78_RS30790;Name=NIV78_RS30790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30790 NZ_CP100139.1 Protein Homology CDS 168622 168891 . - 0 ID=cds-WP_012732894.1;Parent=gene-NIV78_RS30790;Dbxref=Genbank:WP_012732894.1;Name=WP_012732894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424109.1;locus_tag=NIV78_RS30790;product=DUF1778 domain-containing protein;protein_id=WP_012732894.1;transl_table=11 NZ_CP100139.1 RefSeq gene 169097 169282 . - . ID=gene-NIV78_RS30795;Name=NIV78_RS30795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30795 NZ_CP100139.1 GeneMarkS-2+ CDS 169097 169282 . - 0 ID=cds-WP_153479281.1;Parent=gene-NIV78_RS30795;Dbxref=Genbank:WP_153479281.1;Name=WP_153479281.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS30795;product=hypothetical protein;protein_id=WP_153479281.1;transl_table=11 NZ_CP100139.1 RefSeq gene 169767 170369 . + . ID=gene-NIV78_RS30800;Name=NIV78_RS30800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NIV78_RS30800 NZ_CP100139.1 GeneMarkS-2+ CDS 169767 170369 . + 0 ID=cds-WP_127913917.1;Parent=gene-NIV78_RS30800;Dbxref=Genbank:WP_127913917.1;Name=WP_127913917.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NIV78_RS30800;product=hypothetical protein;protein_id=WP_127913917.1;transl_table=11 ###